Query 021319
Match_columns 314
No_of_seqs 199 out of 2184
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 15:56:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.4E-49 4.6E-54 337.1 38.5 290 11-311 23-319 (321)
2 1vyh_C Platelet-activating fac 100.0 1.2E-48 4.1E-53 342.2 40.6 287 12-311 100-409 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 1.2E-46 4E-51 321.7 43.4 285 12-310 47-340 (340)
4 4g56_B MGC81050 protein; prote 100.0 6.9E-48 2.3E-52 331.3 34.1 296 7-312 29-342 (357)
5 2ynn_A Coatomer subunit beta'; 100.0 3.5E-46 1.2E-50 313.8 42.9 289 11-313 4-302 (304)
6 2pbi_B Guanine nucleotide-bind 100.0 6.6E-46 2.3E-50 318.6 43.0 289 9-310 53-354 (354)
7 2xzm_R RACK1; ribosome, transl 100.0 3.1E-46 1.1E-50 319.4 40.7 300 1-312 1-339 (343)
8 3frx_A Guanine nucleotide-bind 100.0 5.1E-46 1.7E-50 314.9 41.0 292 10-312 7-316 (319)
9 3iz6_a 40S ribosomal protein R 100.0 4.7E-47 1.6E-51 328.9 33.3 292 9-313 55-375 (380)
10 4gqb_B Methylosome protein 50; 100.0 4.5E-46 1.5E-50 318.0 36.0 285 17-312 27-330 (344)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.1E-45 1.7E-49 312.1 38.1 292 12-313 7-335 (345)
12 4ery_A WD repeat-containing pr 100.0 2.8E-44 9.4E-49 303.1 41.4 290 12-312 15-311 (312)
13 1erj_A Transcriptional repress 100.0 3.8E-44 1.3E-48 312.0 40.4 282 18-313 62-389 (393)
14 2hes_X YDR267CP; beta-propelle 100.0 1.4E-44 4.7E-49 307.5 36.4 289 12-314 6-329 (330)
15 1nr0_A Actin interacting prote 100.0 5.5E-44 1.9E-48 327.8 41.3 293 12-312 51-521 (611)
16 1nr0_A Actin interacting prote 100.0 3.8E-44 1.3E-48 328.9 39.5 286 14-313 141-567 (611)
17 4aow_A Guanine nucleotide-bind 100.0 5.7E-43 1.9E-47 297.9 42.4 291 11-312 29-336 (340)
18 3zwl_B Eukaryotic translation 100.0 2.8E-43 9.7E-48 302.5 40.2 289 11-313 23-346 (369)
19 2ymu_A WD-40 repeat protein; u 100.0 1.8E-42 6.2E-47 315.4 42.1 279 13-310 296-577 (577)
20 3ei3_B DNA damage-binding prot 100.0 7.3E-43 2.5E-47 302.6 36.8 286 13-313 66-382 (383)
21 1sq9_A Antiviral protein SKI8; 100.0 6.3E-43 2.1E-47 304.1 34.8 291 12-313 8-395 (397)
22 3dm0_A Maltose-binding peripla 100.0 4.9E-42 1.7E-46 319.4 41.6 289 14-313 376-693 (694)
23 2pm9_A Protein WEB1, protein t 100.0 2.8E-43 9.5E-48 308.0 29.0 289 17-313 64-414 (416)
24 1gxr_A ESG1, transducin-like e 100.0 5.9E-41 2E-45 284.7 41.7 284 16-311 47-335 (337)
25 4e54_B DNA damage-binding prot 100.0 1.1E-42 3.6E-47 306.8 31.7 289 14-313 113-430 (435)
26 2ymu_A WD-40 repeat protein; u 100.0 6.4E-41 2.2E-45 305.2 43.6 282 13-312 255-538 (577)
27 4h5i_A Guanine nucleotide-exch 100.0 4.9E-42 1.7E-46 295.7 29.9 281 21-313 15-343 (365)
28 3k26_A Polycomb protein EED; W 100.0 9.4E-42 3.2E-46 292.9 31.5 297 6-312 3-365 (366)
29 3ow8_A WD repeat-containing pr 100.0 1.1E-40 3.7E-45 282.4 37.1 244 14-262 74-319 (321)
30 1k8k_C P40, ARP2/3 complex 41 100.0 1.8E-41 6.3E-46 292.0 32.9 286 15-312 3-360 (372)
31 4gqb_B Methylosome protein 50; 100.0 1.1E-40 3.7E-45 284.7 36.5 247 18-267 80-334 (344)
32 3i2n_A WD repeat-containing pr 100.0 4.3E-41 1.5E-45 288.0 33.8 291 11-313 9-353 (357)
33 2pm7_B Protein transport prote 100.0 7.6E-41 2.6E-45 280.3 33.6 249 15-312 4-284 (297)
34 1r5m_A SIR4-interacting protei 100.0 1.4E-40 4.8E-45 291.0 36.6 285 17-312 42-424 (425)
35 3gre_A Serine/threonine-protei 100.0 1.5E-41 5.2E-46 299.4 29.2 286 13-310 55-437 (437)
36 1vyh_C Platelet-activating fac 100.0 1.1E-40 3.6E-45 291.8 34.2 246 12-262 142-409 (410)
37 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-39 5.7E-44 273.1 37.8 280 11-313 9-296 (313)
38 1got_B GT-beta; complex (GTP-b 100.0 2E-39 6.8E-44 276.9 36.3 247 13-261 90-340 (340)
39 3dw8_B Serine/threonine-protei 100.0 3.5E-40 1.2E-44 291.1 31.9 277 18-296 26-438 (447)
40 3bg1_A Protein SEC13 homolog; 100.0 8.8E-41 3E-45 282.4 26.0 264 14-312 7-292 (316)
41 3dwl_C Actin-related protein 2 100.0 1.1E-41 3.7E-46 294.5 20.7 284 15-311 6-377 (377)
42 3v7d_B Cell division control p 100.0 7.6E-39 2.6E-43 284.2 39.0 282 13-313 114-421 (464)
43 3mmy_A MRNA export factor; mRN 100.0 3.2E-39 1.1E-43 277.1 34.3 279 13-296 32-337 (368)
44 4a11_B DNA excision repair pro 100.0 8.9E-39 3E-43 278.3 37.4 294 12-313 35-365 (408)
45 4g56_B MGC81050 protein; prote 100.0 1.8E-39 6.2E-44 278.9 32.3 247 16-265 90-344 (357)
46 2ynn_A Coatomer subunit beta'; 100.0 4.8E-39 1.7E-43 270.3 33.8 244 60-312 7-258 (304)
47 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-40 5E-45 297.9 26.0 285 19-312 132-516 (524)
48 1yfq_A Cell cycle arrest prote 100.0 1.6E-39 5.5E-44 276.9 30.9 275 16-297 7-315 (342)
49 3vl1_A 26S proteasome regulato 100.0 9.4E-39 3.2E-43 279.8 35.9 282 17-313 95-419 (420)
50 2pm9_A Protein WEB1, protein t 100.0 2.6E-40 8.8E-45 289.2 25.9 284 19-313 11-337 (416)
51 1gxr_A ESG1, transducin-like e 100.0 9E-39 3.1E-43 271.3 34.6 280 19-313 8-296 (337)
52 3f3f_A Nucleoporin SEH1; struc 100.0 9.3E-39 3.2E-43 271.8 34.3 259 13-271 4-344 (351)
53 3mkq_A Coatomer beta'-subunit; 100.0 6.5E-38 2.2E-42 296.3 42.1 280 11-295 4-293 (814)
54 1erj_A Transcriptional repress 100.0 3.8E-38 1.3E-42 274.1 36.1 239 21-264 124-389 (393)
55 3frx_A Guanine nucleotide-bind 100.0 2.2E-37 7.4E-42 261.9 35.9 244 59-312 10-266 (319)
56 3iz6_a 40S ribosomal protein R 100.0 6E-39 2.1E-43 278.0 26.9 255 13-267 101-378 (380)
57 2pbi_B Guanine nucleotide-bind 100.0 1.7E-37 5.6E-42 266.4 35.3 248 13-261 99-354 (354)
58 1pgu_A Actin interacting prote 100.0 2.2E-37 7.4E-42 283.6 37.9 286 13-313 153-572 (615)
59 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-37 1.2E-41 303.5 41.6 248 11-263 606-912 (1249)
60 4aez_A CDC20, WD repeat-contai 100.0 3E-37 1E-41 269.1 36.2 280 17-313 88-380 (401)
61 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.7E-37 5.7E-42 265.5 33.6 252 17-271 58-342 (345)
62 4ggc_A P55CDC, cell division c 100.0 1.7E-36 5.9E-41 255.4 38.9 276 23-313 28-315 (318)
63 4gga_A P55CDC, cell division c 100.0 6.8E-37 2.3E-41 268.5 37.6 275 22-312 107-394 (420)
64 3vl1_A 26S proteasome regulato 100.0 9.8E-39 3.4E-43 279.7 25.2 277 22-313 58-365 (420)
65 1pgu_A Actin interacting prote 100.0 5.8E-37 2E-41 280.7 37.6 283 13-313 196-614 (615)
66 2xzm_R RACK1; ribosome, transl 100.0 2.7E-37 9.2E-42 264.0 33.0 246 13-265 69-341 (343)
67 3vu4_A KMHSV2; beta-propeller 100.0 3.1E-37 1.1E-41 264.8 32.6 275 15-311 14-334 (355)
68 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.3E-36 1.1E-40 266.0 40.1 280 13-313 152-442 (445)
69 4ery_A WD repeat-containing pr 100.0 1E-36 3.5E-41 256.8 34.2 246 13-263 58-311 (312)
70 3v7d_B Cell division control p 100.0 1.7E-36 5.9E-41 269.0 36.6 283 13-311 155-463 (464)
71 2oaj_A Protein SNI1; WD40 repe 100.0 2.5E-37 8.6E-42 294.0 33.0 283 19-311 97-659 (902)
72 1p22_A F-BOX/WD-repeat protein 100.0 2E-36 7E-41 266.7 35.7 270 17-313 130-414 (435)
73 2hes_X YDR267CP; beta-propelle 100.0 1.6E-36 5.3E-41 257.9 32.5 245 18-264 56-328 (330)
74 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-36 3.6E-41 289.7 33.7 234 13-254 10-297 (902)
75 3jrp_A Fusion protein of prote 100.0 1.3E-36 4.5E-41 262.0 31.3 251 13-265 4-288 (379)
76 2aq5_A Coronin-1A; WD40 repeat 100.0 9.9E-37 3.4E-41 265.9 29.2 281 22-312 36-341 (402)
77 3sfz_A APAF-1, apoptotic pepti 100.0 8.1E-36 2.8E-40 293.8 38.9 287 13-312 650-1073(1249)
78 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.4E-35 8.1E-40 260.5 38.1 274 13-313 111-391 (445)
79 1sq9_A Antiviral protein SKI8; 100.0 3.7E-36 1.3E-40 261.3 31.0 252 13-266 55-397 (397)
80 3k26_A Polycomb protein EED; W 100.0 4.6E-36 1.6E-40 257.5 28.9 240 19-264 68-366 (366)
81 4aow_A Guanine nucleotide-bind 100.0 9.2E-35 3.1E-39 247.1 36.1 245 59-312 31-285 (340)
82 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.2E-35 1.1E-39 260.2 33.4 271 20-293 4-372 (450)
83 3i2n_A WD repeat-containing pr 100.0 1.8E-35 6.1E-40 253.1 30.7 247 17-267 62-356 (357)
84 3gre_A Serine/threonine-protei 100.0 4.8E-36 1.6E-40 264.2 27.9 267 27-313 34-359 (437)
85 3mkq_A Coatomer beta'-subunit; 100.0 6.5E-35 2.2E-39 275.8 36.7 284 13-311 48-384 (814)
86 3zwl_B Eukaryotic translation 100.0 3E-34 1E-38 246.2 37.6 256 56-312 22-303 (369)
87 4h5i_A Guanine nucleotide-exch 100.0 9.7E-36 3.3E-40 256.4 26.6 248 14-265 67-344 (365)
88 3jro_A Fusion protein of prote 100.0 1E-35 3.4E-40 278.9 28.3 250 14-312 3-284 (753)
89 4aez_A CDC20, WD repeat-contai 100.0 4E-34 1.4E-38 249.4 35.0 246 18-271 132-387 (401)
90 3dm0_A Maltose-binding peripla 100.0 1.8E-34 6.2E-39 268.5 34.9 245 60-313 376-632 (694)
91 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-35 8.8E-40 263.9 27.9 248 15-264 202-517 (524)
92 3odt_A Protein DOA1; ubiquitin 100.0 3E-34 1E-38 241.0 32.4 251 13-272 52-304 (313)
93 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-35 3.7E-40 261.8 22.5 258 20-311 15-295 (588)
94 1r5m_A SIR4-interacting protei 100.0 1E-33 3.5E-38 247.5 33.4 238 19-263 107-424 (425)
95 3ei3_B DNA damage-binding prot 100.0 3.9E-34 1.3E-38 247.8 30.3 240 17-264 115-382 (383)
96 3bws_A Protein LP49; two-domai 100.0 2.2E-33 7.7E-38 246.7 35.3 283 21-313 123-432 (433)
97 3jrp_A Fusion protein of prote 100.0 3.6E-34 1.2E-38 246.8 29.5 243 61-312 6-286 (379)
98 3lrv_A PRE-mRNA-splicing facto 100.0 6.9E-35 2.4E-39 249.0 23.5 259 27-299 43-327 (343)
99 4gga_A P55CDC, cell division c 100.0 3.2E-33 1.1E-37 245.2 34.6 248 15-270 142-401 (420)
100 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-33 5.9E-38 239.2 31.9 244 61-313 6-337 (351)
101 2xyi_A Probable histone-bindin 100.0 1.3E-33 4.3E-38 248.5 30.4 283 22-312 47-409 (430)
102 4e54_B DNA damage-binding prot 100.0 8.7E-34 3E-38 249.9 28.7 252 61-313 114-387 (435)
103 2xyi_A Probable histone-bindin 100.0 1.9E-33 6.6E-38 247.3 30.6 252 13-264 121-410 (430)
104 1k8k_C P40, ARP2/3 complex 41 100.0 2.2E-33 7.6E-38 241.5 30.1 241 62-312 4-273 (372)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-33 3.7E-38 246.7 28.4 253 13-267 74-345 (402)
106 1l0q_A Surface layer protein; 100.0 6.3E-32 2.1E-36 234.4 38.4 265 33-312 3-274 (391)
107 3dwl_C Actin-related protein 2 100.0 5.5E-34 1.9E-38 246.1 24.8 248 12-262 47-377 (377)
108 4gq1_A NUP37; propeller, trans 100.0 1.7E-33 5.9E-38 244.8 27.4 286 22-313 17-392 (393)
109 3dw8_B Serine/threonine-protei 100.0 2E-33 6.9E-38 247.8 28.2 239 64-313 26-373 (447)
110 4ggc_A P55CDC, cell division c 100.0 7.5E-32 2.6E-36 227.0 34.9 243 16-266 63-317 (318)
111 1l0q_A Surface layer protein; 100.0 6.5E-31 2.2E-35 228.0 39.8 252 14-273 26-284 (391)
112 3mmy_A MRNA export factor; mRN 100.0 2.7E-32 9.3E-37 234.0 30.6 243 14-264 80-346 (368)
113 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-32 4.3E-37 242.5 29.0 255 13-284 166-434 (435)
114 1yfq_A Cell cycle arrest prote 100.0 1.4E-32 4.9E-37 233.9 28.5 238 63-313 8-282 (342)
115 2pm7_B Protein transport prote 100.0 4.1E-32 1.4E-36 227.3 28.2 213 13-264 46-285 (297)
116 4a11_B DNA excision repair pro 100.0 1.6E-31 5.5E-36 232.4 32.0 280 17-311 96-403 (408)
117 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-32 4.3E-37 242.4 24.9 258 14-294 46-350 (588)
118 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-31 4.7E-36 229.7 29.1 234 61-313 14-271 (355)
119 4gq1_A NUP37; propeller, trans 100.0 8.4E-33 2.9E-37 240.4 21.8 243 18-260 87-386 (393)
120 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-30 4.3E-35 230.7 29.4 234 67-311 5-337 (450)
121 3bg1_A Protein SEC13 homolog; 100.0 1.2E-31 4.2E-36 226.3 21.9 225 13-263 50-292 (316)
122 3bws_A Protein LP49; two-domai 100.0 1.8E-29 6.1E-34 221.8 33.9 244 15-264 164-432 (433)
123 3lrv_A PRE-mRNA-splicing facto 100.0 2.1E-31 7E-36 227.5 20.5 222 79-313 48-292 (343)
124 2w18_A PALB2, fancn, partner a 100.0 4.1E-28 1.4E-32 201.5 34.9 278 22-311 41-355 (356)
125 2w18_A PALB2, fancn, partner a 100.0 5.7E-29 1.9E-33 206.7 23.7 210 19-262 110-355 (356)
126 2hqs_A Protein TOLB; TOLB, PAL 100.0 9.4E-29 3.2E-33 216.3 26.2 284 19-312 61-386 (415)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.1E-27 3.8E-32 209.5 28.0 264 14-287 111-410 (415)
128 3u4y_A Uncharacterized protein 100.0 2.6E-26 9E-31 194.5 34.6 274 27-313 4-304 (331)
129 1nir_A Nitrite reductase; hemo 100.0 1.5E-26 5.2E-31 208.5 33.7 281 23-312 181-513 (543)
130 3vgz_A Uncharacterized protein 100.0 1.1E-25 3.8E-30 192.1 36.3 270 19-295 39-334 (353)
131 3jro_A Fusion protein of prote 100.0 3.8E-28 1.3E-32 227.7 22.7 213 13-264 46-285 (753)
132 1ri6_A Putative isomerase YBHE 100.0 5E-26 1.7E-30 193.3 31.8 268 34-311 7-306 (343)
133 1nir_A Nitrite reductase; hemo 100.0 1.6E-25 5.5E-30 201.8 35.3 278 27-313 144-458 (543)
134 1ri6_A Putative isomerase YBHE 100.0 1.9E-25 6.6E-30 189.6 29.8 269 17-287 34-335 (343)
135 1pby_B Quinohemoprotein amine 100.0 2E-25 6.9E-30 189.0 29.7 263 33-312 2-309 (337)
136 2ecf_A Dipeptidyl peptidase IV 100.0 7.2E-26 2.5E-30 212.0 29.3 278 20-311 36-411 (741)
137 2ojh_A Uncharacterized protein 100.0 1E-25 3.5E-30 187.0 26.3 252 37-296 17-293 (297)
138 2z3z_A Dipeptidyl aminopeptida 99.9 4.4E-25 1.5E-29 205.6 29.6 278 21-312 82-434 (706)
139 3o4h_A Acylamino-acid-releasin 99.9 3.3E-25 1.1E-29 202.1 25.1 262 19-297 20-304 (582)
140 2ecf_A Dipeptidyl peptidase IV 99.9 1.8E-24 6E-29 202.6 27.7 267 22-295 110-445 (741)
141 1k32_A Tricorn protease; prote 99.9 4.4E-24 1.5E-28 206.9 28.8 292 13-312 92-460 (1045)
142 1k32_A Tricorn protease; prote 99.9 3.7E-24 1.3E-28 207.4 28.1 272 14-297 197-494 (1045)
143 1xfd_A DIP, dipeptidyl aminope 99.9 1E-24 3.6E-29 203.6 22.1 279 21-311 17-391 (723)
144 3hfq_A Uncharacterized protein 99.9 2E-22 6.8E-27 171.9 33.4 264 39-311 13-315 (347)
145 3u4y_A Uncharacterized protein 99.9 1.7E-22 5.8E-27 171.0 30.9 245 16-266 36-306 (331)
146 1jmx_B Amine dehydrogenase; ox 99.9 6.1E-23 2.1E-27 174.7 27.3 240 25-274 4-335 (349)
147 2ojh_A Uncharacterized protein 99.9 1.5E-23 5E-28 173.9 22.4 235 14-255 35-293 (297)
148 3vgz_A Uncharacterized protein 99.9 4.7E-22 1.6E-26 169.5 31.1 238 66-312 40-302 (353)
149 1pby_B Quinohemoprotein amine 99.9 1.2E-22 4.1E-27 171.9 26.3 244 22-273 35-319 (337)
150 3scy_A Hypothetical bacterial 99.9 1E-21 3.5E-26 168.4 31.5 262 19-283 48-360 (361)
151 2z3z_A Dipeptidyl aminopeptida 99.9 7.3E-23 2.5E-27 190.7 25.9 262 23-295 28-376 (706)
152 3hfq_A Uncharacterized protein 99.9 5.2E-22 1.8E-26 169.3 28.8 248 17-268 36-323 (347)
153 3scy_A Hypothetical bacterial 99.9 9.4E-21 3.2E-25 162.4 34.6 268 32-311 13-335 (361)
154 1xfd_A DIP, dipeptidyl aminope 99.9 6.7E-23 2.3E-27 191.4 22.8 277 14-294 51-429 (723)
155 1jmx_B Amine dehydrogenase; ox 99.9 1.3E-21 4.6E-26 166.3 26.8 225 73-312 6-324 (349)
156 3pe7_A Oligogalacturonate lyas 99.9 1.3E-21 4.5E-26 169.1 26.1 277 13-295 23-371 (388)
157 1z68_A Fibroblast activation p 99.9 2.5E-22 8.7E-27 187.4 18.8 262 25-295 20-376 (719)
158 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.7E-20 1.9E-24 157.9 29.7 268 35-312 5-340 (365)
159 2oit_A Nucleoporin 214KDA; NH2 99.9 4.9E-21 1.7E-25 168.2 23.2 202 20-265 36-279 (434)
160 2oit_A Nucleoporin 214KDA; NH2 99.9 4.2E-21 1.4E-25 168.6 20.7 215 89-313 23-278 (434)
161 3o4h_A Acylamino-acid-releasin 99.9 6.7E-21 2.3E-25 173.7 19.5 231 66-311 21-274 (582)
162 3c5m_A Oligogalacturonate lyas 99.9 7.8E-20 2.7E-24 158.2 22.2 264 22-295 37-371 (396)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 4.9E-19 1.7E-23 152.1 25.4 241 21-265 40-342 (365)
164 1z68_A Fibroblast activation p 99.8 1.6E-20 5.6E-25 175.2 16.5 221 71-294 20-331 (719)
165 3azo_A Aminopeptidase; POP fam 99.8 3.2E-19 1.1E-23 164.9 24.3 279 11-295 14-357 (662)
166 1q7f_A NHL, brain tumor CG1071 99.8 3.2E-17 1.1E-21 135.7 31.2 240 18-265 27-281 (286)
167 2oiz_A Aromatic amine dehydrog 99.8 1.4E-17 4.7E-22 142.7 29.2 263 16-287 47-360 (361)
168 4a5s_A Dipeptidyl peptidase 4 99.8 6.3E-19 2.2E-23 165.0 22.5 260 20-295 16-340 (740)
169 2gop_A Trilobed protease; beta 99.8 1.7E-17 5.9E-22 141.1 27.6 265 21-312 15-340 (347)
170 2dg1_A DRP35, lactonase; beta 99.8 8.7E-17 3E-21 136.1 30.9 266 21-296 6-301 (333)
171 1q7f_A NHL, brain tumor CG1071 99.8 2E-16 6.8E-21 130.9 31.9 235 64-313 27-280 (286)
172 3fvz_A Peptidyl-glycine alpha- 99.8 1.1E-16 3.7E-21 135.5 27.9 236 66-312 23-321 (329)
173 3fvz_A Peptidyl-glycine alpha- 99.8 1.4E-16 4.7E-21 134.8 28.1 239 20-263 23-321 (329)
174 2oiz_A Aromatic amine dehydrog 99.8 1.9E-16 6.6E-21 135.6 27.4 254 40-312 29-333 (361)
175 3e5z_A Putative gluconolactona 99.8 9.5E-16 3.3E-20 127.6 28.4 232 62-300 23-281 (296)
176 3e5z_A Putative gluconolactona 99.8 3.1E-15 1.1E-19 124.4 30.2 241 14-267 21-289 (296)
177 3dsm_A Uncharacterized protein 99.8 9.4E-16 3.2E-20 129.6 26.0 260 40-312 15-301 (328)
178 4a5s_A Dipeptidyl peptidase 4 99.8 4.2E-16 1.4E-20 145.9 25.9 263 24-295 65-436 (740)
179 3dsm_A Uncharacterized protein 99.7 2.8E-15 9.6E-20 126.7 28.1 251 21-283 44-320 (328)
180 3azo_A Aminopeptidase; POP fam 99.7 6.8E-16 2.3E-20 142.6 25.0 250 14-268 61-373 (662)
181 3pe7_A Oligogalacturonate lyas 99.7 6.5E-16 2.2E-20 133.3 23.0 249 61-312 25-328 (388)
182 2z2n_A Virginiamycin B lyase; 99.7 2.6E-13 9.1E-18 112.4 37.7 265 16-293 10-284 (299)
183 2dg1_A DRP35, lactonase; beta 99.7 4.3E-14 1.5E-18 119.4 33.3 234 15-254 39-300 (333)
184 3no2_A Uncharacterized protein 99.7 5.7E-15 1.9E-19 121.6 27.1 209 79-293 5-231 (276)
185 2xdw_A Prolyl endopeptidase; a 99.7 5.1E-15 1.7E-19 138.0 29.3 243 18-266 122-416 (710)
186 1rwi_B Serine/threonine-protei 99.7 4.2E-15 1.4E-19 121.7 25.4 239 22-266 25-266 (270)
187 1qks_A Cytochrome CD1 nitrite 99.7 2.3E-13 7.7E-18 122.7 37.7 258 30-293 165-458 (567)
188 2xdw_A Prolyl endopeptidase; a 99.7 2.5E-14 8.7E-19 133.3 30.7 261 30-292 81-397 (710)
189 1rwi_B Serine/threonine-protei 99.7 1.6E-14 5.6E-19 118.2 25.4 235 68-313 25-264 (270)
190 2bkl_A Prolyl endopeptidase; m 99.7 3.5E-15 1.2E-19 138.8 23.5 243 18-267 118-400 (695)
191 1qks_A Cytochrome CD1 nitrite 99.7 2E-13 6.9E-18 123.0 34.2 268 21-292 197-520 (567)
192 2qc5_A Streptogramin B lactona 99.7 1.6E-12 5.4E-17 107.8 37.1 263 18-292 17-289 (300)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 4.6E-14 1.6E-18 118.1 27.2 244 15-264 12-299 (314)
194 2gop_A Trilobed protease; beta 99.7 3.8E-14 1.3E-18 120.3 26.3 225 21-266 59-332 (347)
195 2bkl_A Prolyl endopeptidase; m 99.7 1E-14 3.5E-19 135.6 24.2 261 29-293 76-381 (695)
196 3no2_A Uncharacterized protein 99.7 2.2E-13 7.6E-18 112.1 29.1 233 30-273 3-261 (276)
197 3c5m_A Oligogalacturonate lyas 99.7 4E-15 1.4E-19 128.5 19.4 233 25-266 85-386 (396)
198 3g4e_A Regucalcin; six bladed 99.7 1.5E-12 5.3E-17 108.2 31.9 225 67-294 13-261 (297)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 7.9E-13 2.7E-17 110.5 29.5 226 63-293 14-286 (314)
200 2z2n_A Virginiamycin B lyase; 99.6 4E-12 1.4E-16 105.3 33.3 244 61-310 9-261 (299)
201 3sjl_D Methylamine dehydrogena 99.6 4.2E-13 1.4E-17 114.2 27.4 254 26-285 83-384 (386)
202 3sjl_D Methylamine dehydrogena 99.6 5E-13 1.7E-17 113.7 27.0 269 27-311 39-361 (386)
203 2mad_H Methylamine dehydrogena 99.6 8.1E-12 2.8E-16 107.2 33.9 267 27-312 27-349 (373)
204 1yr2_A Prolyl oligopeptidase; 99.6 6.1E-13 2.1E-17 124.5 28.9 260 29-292 115-424 (741)
205 1yr2_A Prolyl oligopeptidase; 99.6 3.1E-13 1E-17 126.5 24.7 239 19-266 161-443 (741)
206 2ghs_A AGR_C_1268P; regucalcin 99.6 3.6E-11 1.2E-15 101.3 32.0 220 69-295 51-292 (326)
207 3hrp_A Uncharacterized protein 99.6 1.2E-11 4.3E-16 107.4 29.4 232 67-311 131-408 (409)
208 3hrp_A Uncharacterized protein 99.5 2.5E-11 8.5E-16 105.5 30.5 232 21-262 131-408 (409)
209 3dr2_A Exported gluconolactona 99.5 3.2E-11 1.1E-15 100.6 29.9 227 62-295 40-297 (305)
210 3c75_H MADH, methylamine dehyd 99.5 7.8E-12 2.7E-16 108.2 26.7 267 30-312 82-401 (426)
211 2mad_H Methylamine dehydrogena 99.5 1.3E-10 4.4E-15 99.7 33.2 238 25-271 70-357 (373)
212 2qe8_A Uncharacterized protein 99.5 7.4E-12 2.5E-16 106.3 24.9 256 21-295 17-311 (343)
213 3g4e_A Regucalcin; six bladed 99.5 4.6E-11 1.6E-15 99.3 28.2 226 18-252 10-260 (297)
214 2qc5_A Streptogramin B lactona 99.5 4E-10 1.4E-14 93.1 33.6 243 61-310 14-266 (300)
215 1xip_A Nucleoporin NUP159; bet 99.5 1.5E-12 5E-17 111.3 18.8 169 111-292 40-231 (388)
216 3c75_H MADH, methylamine dehyd 99.5 2.9E-11 9.9E-16 104.6 24.0 254 25-285 122-423 (426)
217 3dr2_A Exported gluconolactona 99.5 1.6E-10 5.6E-15 96.3 27.2 234 12-259 36-302 (305)
218 3iuj_A Prolyl endopeptidase; h 99.5 2.8E-11 9.4E-16 112.4 24.4 239 18-267 126-408 (693)
219 2ghs_A AGR_C_1268P; regucalcin 99.4 8.4E-10 2.9E-14 92.9 30.0 220 21-252 49-290 (326)
220 1xip_A Nucleoporin NUP159; bet 99.4 8.7E-12 3E-16 106.5 17.3 169 68-250 39-230 (388)
221 2ece_A 462AA long hypothetical 99.4 9.4E-10 3.2E-14 94.5 27.9 217 76-293 93-399 (462)
222 1mda_H Methylamine dehydrogena 99.4 3.3E-10 1.1E-14 96.4 23.3 240 34-284 34-366 (368)
223 2ece_A 462AA long hypothetical 99.3 2.8E-09 9.7E-14 91.6 28.2 220 30-252 93-399 (462)
224 3iuj_A Prolyl endopeptidase; h 99.3 3.4E-10 1.2E-14 105.1 24.3 226 64-295 126-391 (693)
225 1mda_H Methylamine dehydrogena 99.3 2.7E-10 9.2E-15 97.0 20.0 221 81-312 34-345 (368)
226 1npe_A Nidogen, entactin; glyc 99.3 2.4E-08 8.1E-13 81.4 30.7 251 33-287 2-263 (267)
227 1kb0_A Quinohemoprotein alcoho 99.3 2.5E-09 8.4E-14 98.8 26.0 261 32-299 77-501 (677)
228 2hz6_A Endoplasmic reticulum t 99.3 5.5E-12 1.9E-16 108.2 7.3 201 79-287 9-216 (369)
229 1kb0_A Quinohemoprotein alcoho 99.3 3.3E-09 1.1E-13 97.9 25.6 256 31-292 127-537 (677)
230 2iwa_A Glutamine cyclotransfer 99.2 9.3E-09 3.2E-13 83.1 24.5 193 69-264 23-237 (266)
231 2iwa_A Glutamine cyclotransfer 99.2 5.8E-09 2E-13 84.3 22.6 194 102-299 12-231 (266)
232 1yiq_A Quinohemoprotein alcoho 99.2 6.8E-09 2.3E-13 96.1 26.2 262 32-299 70-499 (689)
233 1yiq_A Quinohemoprotein alcoho 99.2 1.3E-08 4.4E-13 94.2 27.6 259 32-296 121-540 (689)
234 1fwx_A Nitrous oxide reductase 99.2 1E-09 3.5E-14 97.5 19.1 221 77-299 100-413 (595)
235 2qe8_A Uncharacterized protein 99.2 9.4E-10 3.2E-14 93.3 18.2 230 17-261 63-318 (343)
236 1fwx_A Nitrous oxide reductase 99.2 7E-09 2.4E-13 92.2 22.8 232 30-266 99-433 (595)
237 3nol_A Glutamine cyclotransfer 99.2 1.4E-08 4.7E-13 81.2 22.0 188 102-294 34-244 (262)
238 3nol_A Glutamine cyclotransfer 99.1 2.4E-08 8.2E-13 79.8 21.9 181 69-254 45-245 (262)
239 3q7m_A Lipoprotein YFGL, BAMB; 99.1 2.6E-08 8.8E-13 85.4 24.0 252 31-299 102-372 (376)
240 2hz6_A Endoplasmic reticulum t 99.1 4.8E-11 1.6E-15 102.3 4.6 177 119-302 8-189 (369)
241 3q7m_A Lipoprotein YFGL, BAMB; 99.1 2E-07 6.7E-12 79.9 26.8 254 32-300 53-332 (376)
242 3mbr_X Glutamine cyclotransfer 99.1 2.7E-07 9.2E-12 73.1 24.6 183 67-254 21-224 (243)
243 3nok_A Glutaminyl cyclase; bet 99.0 9.5E-08 3.3E-12 76.4 21.3 175 113-293 59-253 (268)
244 3mbr_X Glutamine cyclotransfer 99.0 2.6E-07 8.9E-12 73.2 22.9 176 113-293 25-222 (243)
245 3nok_A Glutaminyl cyclase; bet 99.0 1.3E-07 4.5E-12 75.5 21.3 179 69-253 57-254 (268)
246 1k3i_A Galactose oxidase precu 99.0 3.2E-07 1.1E-11 84.6 25.4 268 25-295 190-531 (656)
247 2fp8_A Strictosidine synthase; 99.0 2.3E-06 8E-11 71.5 28.7 240 17-263 15-312 (322)
248 1npe_A Nidogen, entactin; glyc 99.0 2.5E-06 8.6E-11 69.3 27.7 219 21-246 36-263 (267)
249 2ad6_A Methanol dehydrogenase 99.0 1E-06 3.5E-11 79.7 27.2 256 32-293 115-525 (571)
250 1kv9_A Type II quinohemoprotei 98.9 5.2E-07 1.8E-11 83.2 25.2 263 32-299 66-482 (668)
251 1kv9_A Type II quinohemoprotei 98.9 1.5E-06 5E-11 80.2 26.8 256 32-293 117-520 (668)
252 2ad6_A Methanol dehydrogenase 98.9 2.6E-06 8.9E-11 77.0 27.8 265 32-301 62-490 (571)
253 2fp8_A Strictosidine synthase; 98.9 5E-06 1.7E-10 69.5 27.8 227 60-291 12-299 (322)
254 3hxj_A Pyrrolo-quinoline quino 98.9 4.5E-07 1.5E-11 75.9 21.3 254 20-296 59-315 (330)
255 3hxj_A Pyrrolo-quinoline quino 98.9 1.1E-07 3.8E-12 79.5 17.3 254 26-302 25-281 (330)
256 4a2l_A BT_4663, two-component 98.8 6.2E-05 2.1E-09 70.9 35.8 276 20-311 309-622 (795)
257 1w6s_A Methanol dehydrogenase 98.8 6.6E-06 2.3E-10 74.6 27.8 264 32-299 62-497 (599)
258 1flg_A Protein (quinoprotein e 98.8 3.6E-05 1.2E-09 69.7 31.6 255 32-289 117-543 (582)
259 2p4o_A Hypothetical protein; p 98.8 4.6E-05 1.6E-09 63.1 29.5 223 21-254 32-278 (306)
260 1w6s_A Methanol dehydrogenase 98.8 1.2E-05 4E-10 72.9 26.9 253 35-293 124-535 (599)
261 4a2l_A BT_4663, two-component 98.8 0.00015 5.1E-09 68.4 35.6 274 20-310 262-578 (795)
262 2p4o_A Hypothetical protein; p 98.7 4.7E-05 1.6E-09 63.1 28.2 222 67-294 32-277 (306)
263 3v64_C Agrin; beta propeller, 98.7 9.6E-05 3.3E-09 62.5 31.3 245 20-272 33-283 (349)
264 3qqz_A Putative uncharacterize 98.7 2.9E-05 1E-09 62.2 24.5 199 61-262 21-251 (255)
265 3v65_B Low-density lipoprotein 98.7 0.00012 4.2E-09 62.7 29.4 241 24-272 80-326 (386)
266 3v9f_A Two-component system se 98.6 0.00027 9.3E-09 66.4 33.6 279 20-311 312-619 (781)
267 3tc9_A Hypothetical hydrolase; 98.6 5.2E-05 1.8E-09 66.1 26.5 153 68-221 138-300 (430)
268 1flg_A Protein (quinoprotein e 98.5 0.00037 1.3E-08 63.1 30.4 220 80-299 118-510 (582)
269 4hw6_A Hypothetical protein, I 98.5 0.00025 8.6E-09 61.8 26.7 197 68-267 140-376 (433)
270 3tc9_A Hypothetical hydrolase; 98.5 0.0004 1.4E-08 60.5 27.9 233 22-262 138-428 (430)
271 3qqz_A Putative uncharacterize 98.5 0.00019 6.4E-09 57.5 23.2 184 109-295 27-243 (255)
272 3p5b_L Low density lipoprotein 98.4 0.00074 2.5E-08 58.2 29.4 232 34-272 85-328 (400)
273 2xe4_A Oligopeptidase B; hydro 98.4 9.6E-05 3.3E-09 69.2 22.9 193 68-262 175-398 (751)
274 3sov_A LRP-6, low-density lipo 98.4 0.00073 2.5E-08 56.3 26.6 228 41-272 12-246 (318)
275 3v65_B Low-density lipoprotein 98.3 0.0011 3.8E-08 56.8 25.4 205 21-230 116-326 (386)
276 1k3i_A Galactose oxidase precu 98.3 0.00012 4.2E-09 67.3 20.6 242 71-312 190-496 (656)
277 3v9f_A Two-component system se 98.3 0.0031 1.1E-07 59.3 33.4 275 21-309 211-530 (781)
278 2xbg_A YCF48-like protein; pho 98.3 0.0014 4.7E-08 54.8 31.6 265 20-300 35-317 (327)
279 2p9w_A MAL S 1 allergenic prot 98.2 0.0008 2.7E-08 55.6 22.4 204 61-267 7-268 (334)
280 1ijq_A LDL receptor, low-densi 98.2 0.0021 7.2E-08 53.4 29.3 175 89-264 10-195 (316)
281 3v64_C Agrin; beta propeller, 98.2 0.0024 8.1E-08 53.9 26.1 203 22-229 74-282 (349)
282 4hw6_A Hypothetical protein, I 98.1 0.0035 1.2E-07 54.6 29.6 234 21-262 139-431 (433)
283 2xe4_A Oligopeptidase B; hydro 98.1 0.0004 1.4E-08 65.0 20.8 183 111-295 176-388 (751)
284 3amr_A 3-phytase; beta-propell 98.1 0.0027 9.1E-08 53.0 26.0 199 71-272 30-272 (355)
285 1ijq_A LDL receptor, low-densi 98.1 0.0027 9.3E-08 52.7 32.0 223 42-272 10-246 (316)
286 3sov_A LRP-6, low-density lipo 98.1 0.0032 1.1E-07 52.4 24.7 205 21-229 35-245 (318)
287 3p5b_L Low density lipoprotein 98.0 0.0061 2.1E-07 52.4 29.8 220 20-240 111-338 (400)
288 3kya_A Putative phosphatase; s 98.0 0.0075 2.6E-07 53.0 28.6 197 69-266 141-411 (496)
289 2ism_A Putative oxidoreductase 98.0 0.0059 2E-07 51.5 23.3 226 20-252 30-333 (352)
290 3kya_A Putative phosphatase; s 97.9 0.0088 3E-07 52.6 28.2 240 22-266 140-477 (496)
291 3amr_A 3-phytase; beta-propell 97.9 0.0041 1.4E-07 51.9 21.0 172 119-293 39-250 (355)
292 3m0c_C LDL receptor, low-densi 97.9 0.015 5E-07 54.5 27.9 209 20-229 423-639 (791)
293 3s94_A LRP-6, low-density lipo 97.9 0.013 4.5E-07 53.4 26.2 226 41-270 17-249 (619)
294 2xbg_A YCF48-like protein; pho 97.9 0.0081 2.8E-07 50.1 25.8 224 66-300 35-274 (327)
295 3ei3_A DNA damage-binding prot 97.8 0.026 9E-07 55.2 33.0 276 20-313 553-913 (1158)
296 3m0c_C LDL receptor, low-densi 97.8 0.02 6.9E-07 53.6 29.8 225 41-271 403-639 (791)
297 1n7d_A LDL receptor, low-densi 97.8 0.00028 9.4E-09 65.4 12.9 205 67-272 406-622 (699)
298 1n7d_A LDL receptor, low-densi 97.8 0.00027 9.4E-09 65.4 12.7 208 22-230 407-622 (699)
299 4a0p_A LRP6, LRP-6, low-densit 97.7 0.03 1E-06 51.1 30.4 223 40-269 13-242 (628)
300 4a0p_A LRP6, LRP-6, low-densit 97.6 0.036 1.2E-06 50.6 26.8 198 21-224 37-239 (628)
301 2ism_A Putative oxidoreductase 97.6 0.023 7.8E-07 47.9 26.3 220 67-293 31-333 (352)
302 3s94_A LRP-6, low-density lipo 97.5 0.047 1.6E-06 49.7 22.8 201 21-225 40-246 (619)
303 3sre_A PON1, serum paraoxonase 97.5 0.037 1.3E-06 46.5 24.6 181 87-272 81-308 (355)
304 3sre_A PON1, serum paraoxonase 97.2 0.079 2.7E-06 44.5 21.2 163 128-293 81-285 (355)
305 2p9w_A MAL S 1 allergenic prot 97.1 0.085 2.9E-06 43.6 26.5 203 17-223 9-266 (334)
306 3a9g_A Putative uncharacterize 97.1 0.1 3.5E-06 43.9 25.6 227 20-252 28-330 (354)
307 2g8s_A Glucose/sorbosone dehyd 97.1 0.11 3.8E-06 43.7 25.5 237 19-257 16-347 (353)
308 2vpj_A Kelch-like protein 12; 97.0 0.11 3.6E-06 42.4 18.4 182 79-265 63-279 (301)
309 2vpj_A Kelch-like protein 12; 96.9 0.12 4.3E-06 42.0 19.9 215 89-313 31-278 (301)
310 2xn4_A Kelch-like protein 2; s 96.9 0.13 4.3E-06 42.0 18.7 183 79-265 62-277 (302)
311 3ii7_A Kelch-like protein 7; p 96.8 0.16 5.6E-06 41.4 19.4 224 81-313 14-272 (306)
312 3ii7_A Kelch-like protein 7; p 96.8 0.17 5.8E-06 41.3 18.6 182 79-265 56-273 (306)
313 2xn4_A Kelch-like protein 2; s 96.6 0.21 7.2E-06 40.6 19.2 216 89-313 30-276 (302)
314 3pbp_A Nucleoporin NUP82; beta 96.6 0.25 8.4E-06 42.3 17.3 104 193-298 67-205 (452)
315 2be1_A Serine/threonine-protei 96.6 0.006 2.1E-07 50.9 7.3 187 80-269 11-236 (339)
316 2xzh_A Clathrin heavy chain 1; 96.4 0.33 1.1E-05 40.1 27.4 130 88-222 48-189 (365)
317 3pbp_A Nucleoporin NUP82; beta 96.3 0.48 1.6E-05 40.6 17.4 108 151-259 67-207 (452)
318 1zgk_A Kelch-like ECH-associat 95.9 0.53 1.8E-05 38.4 17.0 226 30-265 23-288 (308)
319 3a9g_A Putative uncharacterize 95.9 0.63 2.2E-05 39.0 27.6 222 67-293 29-330 (354)
320 3ei3_A DNA damage-binding prot 95.9 1.5 5.2E-05 43.0 30.7 224 68-298 515-760 (1158)
321 3s25_A Hypothetical 7-bladed b 95.7 0.7 2.4E-05 37.8 18.6 184 89-293 88-280 (302)
322 1zgk_A Kelch-like ECH-associat 95.6 0.75 2.6E-05 37.5 19.3 224 80-313 26-287 (308)
323 2uvk_A YJHT; unknown function, 95.4 0.96 3.3E-05 37.6 17.4 235 31-270 19-348 (357)
324 1tl2_A L10, protein (tachylect 95.3 0.72 2.5E-05 35.7 16.0 99 111-215 43-156 (236)
325 4asc_A Kelch repeat and BTB do 95.1 1.2 3.9E-05 36.4 21.0 209 34-254 7-253 (315)
326 1cru_A Protein (soluble quinop 95.0 1.6 5.5E-05 38.0 18.4 102 151-252 28-162 (454)
327 1tl2_A L10, protein (tachylect 94.9 0.97 3.3E-05 35.0 16.8 140 151-299 42-204 (236)
328 1cru_A Protein (soluble quinop 94.8 1.1 3.7E-05 39.1 14.7 104 192-295 27-164 (454)
329 2g8s_A Glucose/sorbosone dehyd 94.7 1.6 5.5E-05 36.4 24.6 222 67-292 18-340 (353)
330 4asc_A Kelch repeat and BTB do 94.7 1.5 5E-05 35.8 22.3 225 81-313 7-277 (315)
331 2zwa_A Leucine carboxyl methyl 93.8 4 0.00014 37.6 18.8 188 79-266 398-637 (695)
332 2zwa_A Leucine carboxyl methyl 93.8 4 0.00014 37.6 17.1 195 118-313 396-635 (695)
333 3das_A Putative oxidoreductase 93.6 2.8 9.5E-05 35.0 26.9 236 16-255 27-330 (347)
334 1bpo_A Protein (clathrin); cla 93.6 3.3 0.00011 35.7 29.1 219 41-271 47-296 (494)
335 2uvk_A YJHT; unknown function, 93.5 2.9 9.8E-05 34.7 17.1 227 80-312 21-341 (357)
336 2wg3_C Hedgehog-interacting pr 93.4 2.1 7.2E-05 37.3 13.8 105 192-296 14-160 (463)
337 1xi4_A Clathrin heavy chain; a 92.6 6.3 0.00022 39.5 16.5 171 88-264 47-235 (1630)
338 1xi4_A Clathrin heavy chain; a 92.4 9.9 0.00034 38.1 20.6 194 71-270 70-295 (1630)
339 3sbq_A Nitrous-oxide reductase 92.1 2.3 8E-05 37.8 11.9 90 90-179 299-407 (638)
340 2woz_A Kelch repeat and BTB do 92.1 4.2 0.00014 33.1 21.5 217 90-313 25-287 (318)
341 2be1_A Serine/threonine-protei 91.7 0.76 2.6E-05 38.2 8.3 113 162-274 11-140 (339)
342 2woz_A Kelch repeat and BTB do 91.5 4.8 0.00017 32.7 20.6 173 78-254 56-263 (318)
343 3das_A Putative oxidoreductase 91.2 5.8 0.0002 33.0 30.2 226 65-293 30-326 (347)
344 3sbq_A Nitrous-oxide reductase 91.0 8.3 0.00028 34.4 16.6 107 150-257 323-461 (638)
345 3s25_A Hypothetical 7-bladed b 90.8 5.7 0.0002 32.3 19.2 163 114-293 58-241 (302)
346 1suu_A DNA gyrase subunit A; t 90.7 6 0.0002 32.4 18.2 178 118-296 6-222 (312)
347 2xzh_A Clathrin heavy chain 1; 87.3 11 0.00039 31.1 29.6 225 27-262 73-330 (365)
348 4gq2_M Nucleoporin NUP120; bet 86.5 22 0.00075 34.1 15.2 38 235-272 237-274 (950)
349 1bpo_A Protein (clathrin); cla 78.2 33 0.0011 29.7 30.3 225 27-262 72-329 (494)
350 3f7f_A Nucleoporin NUP120; nuc 78.0 3.4 0.00012 38.0 5.7 71 242-312 228-304 (729)
351 3uc1_A DNA gyrase subunit A; D 76.0 31 0.0011 28.3 15.4 175 122-297 5-220 (327)
352 3ott_A Two-component system se 74.5 54 0.0018 30.3 28.9 249 20-288 21-292 (758)
353 3b7f_A Glycosyl hydrolase, BNR 72.1 42 0.0014 28.0 18.6 50 235-285 178-242 (394)
354 3qhy_B Beta-lactamase inhibito 70.8 38 0.0013 27.0 18.3 241 22-288 25-267 (282)
355 4a9v_A PHOX; hydrolase, beta-p 70.8 22 0.00074 31.9 8.7 59 235-293 477-549 (592)
356 4fhn_B Nucleoporin NUP120; pro 70.0 20 0.00069 35.2 9.3 36 194-229 240-275 (1139)
357 3zwu_A Alkaline phosphatase PH 69.9 26 0.00089 31.5 9.3 57 236-292 478-548 (592)
358 3qhy_B Beta-lactamase inhibito 68.1 44 0.0015 26.6 16.0 181 68-264 25-207 (282)
359 4fhn_B Nucleoporin NUP120; pro 67.6 6.4 0.00022 38.6 5.3 37 236-272 240-276 (1139)
360 4a9v_A PHOX; hydrolase, beta-p 67.6 33 0.0011 30.7 9.3 60 193-252 477-549 (592)
361 3ott_A Two-component system se 67.2 78 0.0027 29.2 32.1 234 21-267 324-589 (758)
362 4gq2_M Nucleoporin NUP120; bet 67.1 10 0.00035 36.4 6.5 37 193-229 237-273 (950)
363 1zi0_A DNA gyrase subunit A; b 66.7 50 0.0017 26.7 17.4 144 119-263 2-175 (307)
364 3zwu_A Alkaline phosphatase PH 65.1 28 0.00095 31.3 8.5 58 194-251 478-548 (592)
365 1wp5_A Topoisomerase IV; broke 64.5 57 0.002 26.6 15.2 190 118-308 3-228 (323)
366 2wg3_C Hedgehog-interacting pr 55.4 1E+02 0.0035 26.6 19.9 104 151-254 15-159 (463)
367 3f7f_A Nucleoporin NUP120; nuc 55.1 25 0.00085 32.4 6.4 35 194-230 224-258 (729)
368 3mez_B Mannose-specific lectin 50.3 53 0.0018 21.9 6.8 9 302-310 97-105 (113)
369 3uc1_A DNA gyrase subunit A; D 47.9 1.1E+02 0.0039 24.9 17.9 155 67-221 95-278 (327)
370 1q47_A Semaphorin 3A; beta pro 39.5 1.3E+02 0.0044 26.4 8.3 68 193-260 405-488 (495)
371 3b7f_A Glycosyl hydrolase, BNR 38.8 1.7E+02 0.0057 24.2 27.1 108 193-302 233-369 (394)
372 1sqj_A OXG-RCBH, oligoxylogluc 37.6 2.6E+02 0.0088 26.1 11.4 54 191-245 14-75 (789)
373 3al9_A Plexin-A2; beta-propell 35.2 1.3E+02 0.0044 26.7 7.7 68 193-260 401-477 (539)
374 4h3o_A Lectin; cadmium, plant 31.6 1.1E+02 0.0037 20.0 6.6 12 251-262 57-68 (105)
375 1zvt_A Topoisomerase IV subuni 29.5 2E+02 0.0069 22.4 11.6 145 163-309 4-167 (256)
376 3oky_B Putative uncharacterize 28.2 3.2E+02 0.011 24.4 9.6 68 193-260 404-496 (565)
377 1sqj_A OXG-RCBH, oligoxylogluc 27.5 3.8E+02 0.013 24.9 22.5 61 66-127 14-83 (789)
378 4hvt_A Ritya.17583.B, post-pro 25.0 4.1E+02 0.014 24.5 22.3 235 23-263 131-429 (711)
379 3l6v_A GYRA, DNA gyrase subuni 24.9 3E+02 0.01 22.9 18.2 144 118-262 5-178 (370)
380 1olz_A Semaphorin 4D; developm 22.7 4.4E+02 0.015 24.0 10.0 66 194-259 399-477 (663)
381 3r0e_B Lectin; carbohydrate bi 21.9 1.8E+02 0.006 19.1 6.0 17 204-220 25-41 (110)
382 3mez_A Mannose-specific lectin 21.1 1.8E+02 0.0063 19.0 7.0 20 202-221 19-38 (111)
383 4gz8_A Semaphorin-3A; multi-do 20.2 5E+02 0.017 23.7 10.7 67 194-260 414-496 (667)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-49 Score=337.08 Aligned_cols=290 Identities=20% Similarity=0.310 Sum_probs=255.4
Q ss_pred ccceeeecccccEEEEEECCC----CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEe
Q 021319 11 LHSREYTGHKKKVHSVAWNCT----GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS 86 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~----g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 86 (314)
+..+.+.+|.+.|++|+|+|+ +.+|+||+.|++|+||++.... ......+.+|...|.+++|++++ .++++++
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~--~~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s 99 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDER--LDLQWSLEGHQLGVVSVDISHTL-PIAASSS 99 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECSSS-SEEEEEE
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCC--eeeeeeeccCCCCEEEEEECCCC-CEEEEEe
Confidence 344566799999999999985 5689999999999999986432 12334678999999999999874 6999999
Q ss_pred CCCcEEEEeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeE
Q 021319 87 GDKTVRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMF 164 (314)
Q Consensus 87 ~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 164 (314)
.|++|++||+.++++....... .....++|+|++++|++++.++.+.+||++..+...... ....+.+++|+|+++.+
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL 179 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEE
T ss_pred CCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEE
Confidence 9999999999999877766543 345579999999999999999999999999887766543 35568999999999999
Q ss_pred EEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccC
Q 021319 165 FLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHT 244 (314)
Q Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~ 244 (314)
++++.++.+++|+....+.+..+.+|...|++++|+|++++|++|+.|+.|++||+++..++.++.+|...|.+++|+|+
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCC
Confidence 99999999999999988888888999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 245 GDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 245 ~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
+++|++++.|+.|++||+.+++.+..+. +...|++++|+|++.+|++++.| |+++||+.
T Consensus 260 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d--------~~i~vwd~ 319 (321)
T 3ow8_A 260 DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD--------QEIHIYDC 319 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT--------CCEEEEEC
T ss_pred CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC--------CeEEEEeC
Confidence 9999999999999999999999888874 56789999999999999999977 68999986
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-48 Score=342.18 Aligned_cols=287 Identities=22% Similarity=0.378 Sum_probs=257.8
Q ss_pred cceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
....+.+|.++|++++|+|++++|+||+.|++|+|||+++.. ....+.+|.+.|.+++|+|++ ++|++|+.|++|
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~----~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i 174 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD----FERTLKGHTDSVQDISFDHSG-KLLASCSADMTI 174 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC----CCEEECCCSSCEEEEEECTTS-SEEEEEETTSCC
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----EEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeE
Confidence 345688999999999999999999999999999999997643 223578999999999999974 699999999999
Q ss_pred EEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcC
Q 021319 92 RLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTG 169 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
++||+.++++...+.. ...+.+++|+|++++|++++.|+.|++||+++.+.+.... +...+..+.+++++..+++++.
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~ 254 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 254 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcC
Confidence 9999998887766543 4456789999999999999999999999999988776653 4556889999999999999999
Q ss_pred CceEEEEeCCCCCceeeeeecccceEEEEECCC--------------------CCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPM--------------------GRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 170 ~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~--------------------~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
++.+++|+....+....+.+|...+.+++|+|+ +.+|++|+.|+.|++||++++.++..+
T Consensus 255 D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~ 334 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 (410)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 999999999988888888899999999999996 678999999999999999999999999
Q ss_pred eecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEe
Q 021319 230 TKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRI 308 (314)
Q Consensus 230 ~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~ 308 (314)
.+|...|.+++|+|++++|++|+.|+.|++||..+++.+..+. |...|++++|+|++++|++++.| |++||
T Consensus 335 ~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D--------~~i~v 406 (410)
T 1vyh_C 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVD--------QTVKV 406 (410)
T ss_dssp ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETT--------SEEEE
T ss_pred ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCC--------CcEEE
Confidence 9999999999999999999999999999999999998888775 56789999999999999999987 68999
Q ss_pred ccc
Q 021319 309 YGF 311 (314)
Q Consensus 309 ~~~ 311 (314)
|++
T Consensus 407 W~~ 409 (410)
T 1vyh_C 407 WEC 409 (410)
T ss_dssp EC-
T ss_pred EeC
Confidence 986
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-46 Score=321.66 Aligned_cols=285 Identities=15% Similarity=0.220 Sum_probs=247.5
Q ss_pred cceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
..+.+.+|.+.|++++|+|++++|+||+.|++|+|||+.+.. ....+..|...|.+++|+|++ ++|++|+.|+.+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~----~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v 121 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN----KVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNIC 121 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC----EEEEEECSSSCEEEEEECTTS-SEEEEEETTCEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC----cceEeecCCccEEEEEECCCC-CEEEEEeCCCeE
Confidence 456789999999999999999999999999999999987532 334577899999999999974 799999999999
Q ss_pred EEEeCCCCc----eeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEE
Q 021319 92 RLWDARSGK----CSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFF 165 (314)
Q Consensus 92 ~iwd~~~~~----~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 165 (314)
++||+.++. ...... ....+.++.|.+++. +++++.|+.+++||+++.+.+.... +...+.+++|+|++..++
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 999997653 222222 234456688887765 8899999999999999988877654 556799999999999999
Q ss_pred EEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeec--ccCeEEEEEcc
Q 021319 166 LTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL--EWPVRTISFSH 243 (314)
Q Consensus 166 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~--~~~v~~~~~sp 243 (314)
+++.++.+++|+....+....+.+|...|++++|+|++++|++|+.||.|++||++..+.+..+... ...|.+++|+|
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 9999999999999988888888999999999999999999999999999999999998877766432 34799999999
Q ss_pred CCcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEecc
Q 021319 244 TGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYG 310 (314)
Q Consensus 244 ~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~ 310 (314)
++++|++|+.|+.|++||..+++.+..+. |...|++++|+|++.+||++|.| |++|||+
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D--------~~i~iWd 340 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD--------SFLKIWN 340 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETT--------SCEEEEC
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCC--------ccEEecC
Confidence 99999999999999999999998887775 57789999999999999999987 5799996
No 4
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.9e-48 Score=331.33 Aligned_cols=296 Identities=17% Similarity=0.185 Sum_probs=236.3
Q ss_pred eeeeccceeeecccccEEEEEECCCCCEEEEeeC------CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCC
Q 021319 7 PFKNLHSREYTGHKKKVHSVAWNCTGTKLASGSV------DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD 80 (314)
Q Consensus 7 ~~~~~~~~~~~gH~~~V~~v~~s~~g~~l~s~~~------D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 80 (314)
+...+......+|...|++|+|||||++|+|||. |+.|++|+...............+|...|.+++|+|++
T Consensus 29 ~~w~~p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-- 106 (357)
T 4g56_B 29 SAWGRPVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-- 106 (357)
T ss_dssp -----------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT--
T ss_pred cccCCCCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC--
Confidence 3444444455689999999999999999999997 77899998765432222233456799999999999974
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeeE-----EecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceee
Q 021319 81 LIATASGDKTVRLWDARSGKCSQQA-----ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNE 154 (314)
Q Consensus 81 ~l~s~~~D~~v~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~ 154 (314)
.+++++.|++|++||+.+++..... .....+.+++|+|++++|++++.|+.|++||+++.+.+.... +...+.+
T Consensus 107 ~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 186 (357)
T 4g56_B 107 GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNC 186 (357)
T ss_dssp EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 5668899999999999887654322 224567789999999999999999999999999998887764 4567999
Q ss_pred EEeccCCC-eEEEEcCCceEEEEeCCCCCceeeee--ecccceEEEEECCC-CCEEEEeeCCCeEEEeeCCCcEEEEEee
Q 021319 155 IAWNMTGE-MFFLTTGNGTVEVLTYPSLRPLDTVV--AHTAGCYCIAIDPM-GRYFAVGSADSLVSLWDISEMLCVRTFT 230 (314)
Q Consensus 155 ~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~i~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~ 230 (314)
++|++++. .+++++.++.+++|+....++...+. .|...+++++|+|+ +.+|++|+.|+.|++||++++++++.+.
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC
T ss_pred EEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe
Confidence 99999875 67888999999999998777665443 46677999999997 5689999999999999999998889999
Q ss_pred ecccCeEEEEEccCC-cEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcC-CCCeeEEEecCCcccccccceEEe
Q 021319 231 KLEWPVRTISFSHTG-DYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNP-KYNLLAYAGDDKNKYQADEGVFRI 308 (314)
Q Consensus 231 ~~~~~v~~~~~sp~~-~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~-~~~~la~~~~d~~~~~~~~~~~~~ 308 (314)
.+..+|.+++|+|++ ++||+|+.|+.|+|||+.+++.++.+.|.+.|++|+||| ++.+||++|.| |+++|
T Consensus 267 ~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~D--------g~v~i 338 (357)
T 4g56_B 267 VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWD--------HKVLH 338 (357)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETT--------SCEEE
T ss_pred ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCC--------CeEEE
Confidence 999999999999987 689999999999999999999888888889999999999 78999999987 68999
Q ss_pred cccc
Q 021319 309 YGFE 312 (314)
Q Consensus 309 ~~~~ 312 (314)
|+++
T Consensus 339 W~~~ 342 (357)
T 4g56_B 339 HHLP 342 (357)
T ss_dssp EECC
T ss_pred EECC
Confidence 9984
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.5e-46 Score=313.83 Aligned_cols=289 Identities=18% Similarity=0.192 Sum_probs=247.5
Q ss_pred ccceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc
Q 021319 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~ 90 (314)
...+++.+|.+.|++++|+|++++|+||+.||+|++||+++. .....+.+|..+|.+++|+|++ ++|++|+.|++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~----~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~ 78 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ----VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFR 78 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC----ceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCE
Confidence 346778999999999999999999999999999999998753 2334678899999999999974 79999999999
Q ss_pred EEEEeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEe-eee-ccCcceeeEEecc-CCCeEEE
Q 021319 91 VRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPI-HRR-KFGYEVNEIAWNM-TGEMFFL 166 (314)
Q Consensus 91 v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~~~ 166 (314)
|++||+.++++...+..+ ..+.+++|+|++++|++++.|++|++||+++.... ... .+...+.+++|+| ++..+++
T Consensus 79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 999999999887766544 45678999999999999999999999999876433 332 3456789999999 5788999
Q ss_pred EcCCceEEEEeCCCCCceeeee-ecccceEEEEECC--CCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEcc
Q 021319 167 TTGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDP--MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSH 243 (314)
Q Consensus 167 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp 243 (314)
++.|+.+++|++....+...+. .|...+..++++| ++++|++|+.|+.|++||+++++++.++.+|...|.+++|+|
T Consensus 159 gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p 238 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (304)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC
Confidence 9999999999998776655554 5667899999987 678999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCceEEEEECCCCCeEEEEec-cCccceeEEcCCCC--eeEEEecCCcccccccceEEeccccC
Q 021319 244 TGDYIASASEDLFIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYN--LLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 244 ~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~-~~~i~~v~~~~~~~--~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
++++|+||+.|+.|++||..+++.+..+.. ...+.+++|+|++. ++|++++|+ +.+|.+.+
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g---------~~~~~~~~ 302 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG---------FTVLSLGN 302 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE---------EEEEECC-
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc---------eEEEEecc
Confidence 999999999999999999999999888764 56899999999875 578777663 56776643
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.6e-46 Score=318.64 Aligned_cols=289 Identities=18% Similarity=0.228 Sum_probs=248.9
Q ss_pred eeccceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC
Q 021319 9 KNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD 88 (314)
Q Consensus 9 ~~~~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D 88 (314)
.....+++.||.+.|++++|+|++++|+||+.|++|+|||..+.. ....+..|...|.+++|+|++ .++++|+.|
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~----~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d 127 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN----KEHAVTMPCTWVMACAYAPSG-CAIACGGLD 127 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECSSSCCCEEEECTTS-SEEEEESTT
T ss_pred ccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC----cceEEecCCCCEEEEEECCCC-CEEEEeeCC
Confidence 334567889999999999999999999999999999999986532 233567788999999999985 699999999
Q ss_pred CcEEEEeCCCCc------eeeeE-EecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEecc-
Q 021319 89 KTVRLWDARSGK------CSQQA-ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNM- 159 (314)
Q Consensus 89 ~~v~iwd~~~~~------~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~- 159 (314)
+.+++|++.... ..... .....+..+.|+|++..|++++.|+++++||+++.+.+.... +...+.++.++|
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 207 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCC
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeC
Confidence 999999986442 11222 234456679999999999999999999999999988877654 556788888877
Q ss_pred -CCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeec--ccCe
Q 021319 160 -TGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL--EWPV 236 (314)
Q Consensus 160 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~--~~~v 236 (314)
+++.+++++.++.+++|+....+++..+.+|...|++++|+|++++|++|+.|++|++||++....+..+..+ ...+
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGA 287 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccce
Confidence 4689999999999999999998888888999999999999999999999999999999999988877666543 3478
Q ss_pred EEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEecc
Q 021319 237 RTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYG 310 (314)
Q Consensus 237 ~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~ 310 (314)
.+++|+|++++|++|+.|+.|++||+.+++.+..+. |...|++++|+|++++||+++.| |+++||+
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D--------~~v~vW~ 354 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD--------HTLRVWA 354 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETT--------SEEEEEC
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCC--------CCEEecC
Confidence 999999999999999999999999999999887764 67789999999999999999977 6899995
No 7
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.1e-46 Score=319.38 Aligned_cols=300 Identities=23% Similarity=0.352 Sum_probs=240.9
Q ss_pred CCccc-eeeeeccceeeecccccEEEEEE-----CC-CCCEEEEeeCCCcEEEeecCCCCCC---ceeeEEeecCCCCEE
Q 021319 1 MGESS-IPFKNLHSREYTGHKKKVHSVAW-----NC-TGTKLASGSVDQTARVWHIEPHGHG---KVKDIELRGHADSVD 70 (314)
Q Consensus 1 ~~~~~-~~~~~~~~~~~~gH~~~V~~v~~-----s~-~g~~l~s~~~D~~v~iw~~~~~~~~---~~~~~~~~~h~~~v~ 70 (314)
|+|+. ++++......+.||.+.|++++| ++ ++++|+||+.|++|++|++...... ......+.+|...|.
T Consensus 1 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~ 80 (343)
T 2xzm_R 1 MADNSSLDIQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS 80 (343)
T ss_dssp -----CEEEEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE
T ss_pred CCCccccceEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE
Confidence 34443 55666677889999999999999 76 8999999999999999998753321 123346789999999
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee---
Q 021319 71 QLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR--- 146 (314)
Q Consensus 71 ~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--- 146 (314)
+++|+|++ .++++|+.|++|++||++++++...+.. ...+.+++|+|++++|++++.|+.|++||+.........
T Consensus 81 ~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 81 DLALSQEN-CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp EEEECSST-TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTT
T ss_pred EEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeeccc
Confidence 99999974 6899999999999999999988776653 456678999999999999999999999999754433222
Q ss_pred ccCcceeeEEeccCC----------CeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEE
Q 021319 147 KFGYEVNEIAWNMTG----------EMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVS 216 (314)
Q Consensus 147 ~~~~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~ 216 (314)
.+...+.++.|+|.+ ..+++++.++.+++|+. ..+....+.+|...|++++|+|++++|++|+.||.|+
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 244568899999886 68999999999999994 4445566788999999999999999999999999999
Q ss_pred EeeCCC-cEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEE--EEe------------ccCccceeE
Q 021319 217 LWDISE-MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVH--QIP------------CRAAMNSVE 281 (314)
Q Consensus 217 vwd~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~--~~~------------~~~~i~~v~ 281 (314)
+||+.. ......+ .+...|.+++|+|++++++++ .|+.+++|++.+++... .+. +...|++++
T Consensus 239 iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 316 (343)
T 2xzm_R 239 IWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLA 316 (343)
T ss_dssp EEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEE
T ss_pred EEECCCCcccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEE
Confidence 999943 3333333 345679999999999988755 57789999998766543 322 335689999
Q ss_pred EcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 282 WNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 282 ~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
|+|++++||+|+.| |+++||+++
T Consensus 317 ~sp~g~~l~sg~~D--------g~v~~w~~~ 339 (343)
T 2xzm_R 317 WNALGKKLFAGFTD--------GVIRTFSFE 339 (343)
T ss_dssp ECSSSCCEEEEETT--------SEEEEEEEE
T ss_pred ECCCCCeEEEecCC--------ceEEEEEEE
Confidence 99999999999977 689999985
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.1e-46 Score=314.95 Aligned_cols=292 Identities=18% Similarity=0.248 Sum_probs=247.0
Q ss_pred eccceeeecccccEEEEEECCCC-CEEEEeeCCCcEEEeecCCCCCC-ceeeEEeecCCCCEEEEEEcCCCCCEEEEEeC
Q 021319 10 NLHSREYTGHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHG-KVKDIELRGHADSVDQLCWDPKHADLIATASG 87 (314)
Q Consensus 10 ~~~~~~~~gH~~~V~~v~~s~~g-~~l~s~~~D~~v~iw~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 87 (314)
......+.||.+.|++++|+|++ ++|+||+.|++|++|++...... ......+.+|...|.+++|+|++ .+|++|+.
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~ 85 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG-AYALSASW 85 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEET
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC-CEEEEEeC
Confidence 34556789999999999999975 89999999999999998643221 12334678999999999999974 69999999
Q ss_pred CCcEEEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCC-----
Q 021319 88 DKTVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTG----- 161 (314)
Q Consensus 88 D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~----- 161 (314)
|++|++||+.++++...+.. ...+.+++|+|++.++++++.|+.+++||++.........+...+..+.+.|..
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCC
Confidence 99999999999988776653 455678999999999999999999999999765443334455678889998854
Q ss_pred -CeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEE
Q 021319 162 -EMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIS 240 (314)
Q Consensus 162 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~ 240 (314)
..+++++.++.+++|++...+....+.+|...|++++|+|++++|++|+.||.|++||+.+.+++..+..+ .+|.+++
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 244 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLA 244 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEE
T ss_pred ccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEE
Confidence 47899999999999999988877888899999999999999999999999999999999999988888654 5799999
Q ss_pred EccCCcEEEEecCCceEEEEECCCCCeEEEEe---------ccCccceeEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 241 FSHTGDYIASASEDLFIDISNVHTGRTVHQIP---------CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 241 ~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~---------~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
|+|++.+|++++.++ +++|++..+..+..+. +...+.+++|+|++++|++++.| |+++||++
T Consensus 245 ~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D--------g~i~vWd~ 315 (319)
T 3frx_A 245 FSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD--------NVIRVWQV 315 (319)
T ss_dssp ECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT--------SCEEEEEE
T ss_pred EcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC--------ceEEEEEE
Confidence 999999999888765 9999998877666553 13468899999999999999987 68999998
Q ss_pred c
Q 021319 312 E 312 (314)
Q Consensus 312 ~ 312 (314)
.
T Consensus 316 ~ 316 (319)
T 3frx_A 316 M 316 (319)
T ss_dssp E
T ss_pred e
Confidence 4
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.7e-47 Score=328.89 Aligned_cols=292 Identities=19% Similarity=0.253 Sum_probs=245.6
Q ss_pred eeccceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC
Q 021319 9 KNLHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD 88 (314)
Q Consensus 9 ~~~~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D 88 (314)
.....+.+.||.+.|++++|+|++++|+||+.|++|+|||+.+. .....+.+|...|.+++|+|++ ++|++|+.|
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~----~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d 129 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS----QKTHAIKLHCPWVMECAFAPNG-QSVACGGLD 129 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT----EEEEEEECCCTTCCCCEECTTS-SEEEECCSS
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----ccceEEecCCCCEEEEEECCCC-CEEEEeeCC
Confidence 34456789999999999999999999999999999999998653 2344678999999999999974 799999999
Q ss_pred CcEEEEeCCCCce-------eeeE-EecCceEEEEEccC-CCEEEEEeCCCcEEEEEccCCeEeeee------ccCccee
Q 021319 89 KTVRLWDARSGKC-------SQQA-ELSGENINITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRR------KFGYEVN 153 (314)
Q Consensus 89 ~~v~iwd~~~~~~-------~~~~-~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~------~~~~~~~ 153 (314)
+.+++||+.+... .... ........+.|.|+ +..|++++.|+++++||+++.+.+... .+...+.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 9999999865321 1111 12334456778886 457999999999999999988776544 2345678
Q ss_pred eEEecc-CCCeEEEEcCCceEEEEeCC-CCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee
Q 021319 154 EIAWNM-TGEMFFLTTGNGTVEVLTYP-SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (314)
Q Consensus 154 ~~~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~ 231 (314)
++.+++ +++.+++++.|+.+++|++. ..+.+..+.+|...|++++|+|++++|++|+.||+|++||++++.++..+..
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 888876 78899999999999999987 4567778889999999999999999999999999999999999998887755
Q ss_pred ccc-------CeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEE-----eccCccceeEEcCCCCeeEEEecCCccc
Q 021319 232 LEW-------PVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQI-----PCRAAMNSVEWNPKYNLLAYAGDDKNKY 299 (314)
Q Consensus 232 ~~~-------~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~-----~~~~~i~~v~~~~~~~~la~~~~d~~~~ 299 (314)
+.. .|.+++|+|+|++|++|+.|+.|++||..+++.+..+ .|.+.|++++|+|++.+|++||.|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D---- 365 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD---- 365 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT----
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC----
Confidence 432 3889999999999999999999999999999888776 256789999999999999999987
Q ss_pred ccccceEEeccccC
Q 021319 300 QADEGVFRIYGFEN 313 (314)
Q Consensus 300 ~~~~~~~~~~~~~~ 313 (314)
|+++||+++.
T Consensus 366 ----~~i~iW~~~~ 375 (380)
T 3iz6_a 366 ----KNLKIWAFSG 375 (380)
T ss_dssp ----SCEEEEECCS
T ss_pred ----CCEEEEecCC
Confidence 6899999853
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.5e-46 Score=318.05 Aligned_cols=285 Identities=17% Similarity=0.210 Sum_probs=234.4
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCCcEEEeecCC-------CCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCC
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEP-------HGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~-------~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~ 89 (314)
..|...|.+++|+|||++|++++ |+++|+||... .............|...|.+++|+|+ +.|++|+.||
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~l~~~s~dg 103 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE--RGILVASDSG 103 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT--TEEEEEETTS
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC--CeEEEEECCC
Confidence 46788899999999999999888 78889987421 00001111123346778999999986 4688999999
Q ss_pred cEEEEeCCCCceeeeEE-----ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCC-
Q 021319 90 TVRLWDARSGKCSQQAE-----LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGE- 162 (314)
Q Consensus 90 ~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~- 162 (314)
+|++||+.+++...... +...+.+++|+|++++|++++.|+.|++||+++.+.+.... +...+.+++|++++.
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 99999999887654332 24557789999999999999999999999999998887765 567899999999985
Q ss_pred eEEEEcCCceEEEEeCCCCCceeeee--ecccceEEEEECCC-CCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEE
Q 021319 163 MFFLTTGNGTVEVLTYPSLRPLDTVV--AHTAGCYCIAIDPM-GRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 239 (314)
Q Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~i~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~ 239 (314)
.+++++.|+.+++|+....++...+. .|...+++++|+|+ +++|++|+.||.|++||+++++++.++.+|...|.++
T Consensus 184 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGL 263 (344)
T ss_dssp EEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEE
T ss_pred ceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 67888999999999998888776653 45567899999995 5789999999999999999999999999999999999
Q ss_pred EEccCC-cEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCC-eeEEEecCCcccccccceEEecccc
Q 021319 240 SFSHTG-DYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYN-LLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 240 ~~sp~~-~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~-~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+|+|++ ++|||||.|+.|++||..+++.+....|.+.|++|+|+|++. +|+++|.| |++++|.++
T Consensus 264 ~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D--------~~v~~w~v~ 330 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWD--------HQVVHHVVP 330 (344)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETT--------SCEEEEECC
T ss_pred EEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCC--------CeEEEEECC
Confidence 999998 689999999999999999988776666788999999999885 67899977 678999885
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-45 Score=312.10 Aligned_cols=292 Identities=23% Similarity=0.392 Sum_probs=236.5
Q ss_pred cceeeecccc-cEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc
Q 021319 12 HSREYTGHKK-KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (314)
Q Consensus 12 ~~~~~~gH~~-~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~ 90 (314)
..+.+.+|.+ .|.+++|+|+|++|+||+.|++|+||+++.... ........+|...|.+++|+|++ ++|++|+.|++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~ 84 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-ICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDAT 84 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEE-EEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSC
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-eeeeeeccccCCcEEEEEECCCC-CEEEEEECCCc
Confidence 4566789988 999999999999999999999999999865311 01122336899999999999974 79999999999
Q ss_pred EEEEeCCCCce--eeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeE---eeee-ccCcceeeEEeccCCCe
Q 021319 91 VRLWDARSGKC--SQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP---IHRR-KFGYEVNEIAWNMTGEM 163 (314)
Q Consensus 91 v~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~-~~~~~~~~~~~~~~~~~ 163 (314)
+++||...+.. ...+. ....+.+++|+|++++|++++.|+.+++||++.... +... .+...+..++|+|++..
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 99999887653 33332 234567899999999999999999999999976532 2222 34567899999999999
Q ss_pred EEEEcCCceEEEEeCCCCC--ceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCC---------------cEEE
Q 021319 164 FFLTTGNGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE---------------MLCV 226 (314)
Q Consensus 164 ~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~---------------~~~~ 226 (314)
+++++.++.+++|+....+ ....+.+|...|++++|+|++++|++|+.|++|++||... ..++
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 9999999999999986653 3456788999999999999999999999999999999621 2445
Q ss_pred EEeee-cccCeEEEEEccCCcEEEEecCCceEEEEECCCCC----eEE----EE--eccCccceeEEcCCC-CeeEEEec
Q 021319 227 RTFTK-LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGR----TVH----QI--PCRAAMNSVEWNPKY-NLLAYAGD 294 (314)
Q Consensus 227 ~~~~~-~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~----~~~----~~--~~~~~i~~v~~~~~~-~~la~~~~ 294 (314)
..+.+ |...|.+++|+|++.+|++++.|+.|++|+...+. +.. .. .|...|++|+|+|++ .+||++|.
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~ 324 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC
Confidence 55555 77789999999999999999999999999987542 111 11 246789999999987 49999997
Q ss_pred CCcccccccceEEeccccC
Q 021319 295 DKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 295 d~~~~~~~~~~~~~~~~~~ 313 (314)
| |+++||++++
T Consensus 325 D--------g~v~~W~~~~ 335 (345)
T 3fm0_A 325 D--------GEVAFWKYQR 335 (345)
T ss_dssp T--------SCEEEEEECC
T ss_pred C--------CcEEEEEecC
Confidence 7 6899999854
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.8e-44 Score=303.13 Aligned_cols=290 Identities=24% Similarity=0.403 Sum_probs=249.5
Q ss_pred cceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
....+.+|.+.|++++|+|++++|++|+.|+.|++|++.... ....+.+|...|.+++|+|++ ++|++++.|+.|
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i 89 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDS-NLLVSASDDKTL 89 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc----cchhhccCCCceEEEEEcCCC-CEEEEECCCCEE
Confidence 456678999999999999999999999999999999986532 334578999999999999974 799999999999
Q ss_pred EEEeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcC
Q 021319 92 RLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTG 169 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
++||+.++++......+ ..+.++.|+|+++++++++.|+.+++||+++.+.+.... +...+.++.|++++..+++++.
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999999887766543 456689999999999999999999999999888776654 4567899999999999999999
Q ss_pred CceEEEEeCCCCCceeeee-ecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCe---EEEEEccCC
Q 021319 170 NGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPV---RTISFSHTG 245 (314)
Q Consensus 170 ~g~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v---~~~~~sp~~ 245 (314)
++.+++|+....+.+..+. .+...+.+++|+|++++|++++.|+.|++||+++++++..+.+|.... ......+++
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 9999999998877666553 456679999999999999999999999999999999998888776543 223334788
Q ss_pred cEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 246 DYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 246 ~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
.+|++|+.|+.|++||+.+++.+..+. |...|.+++|+|++++|++++.+ .+|++|||..+
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~------~d~~i~~W~~d 311 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE------NDKTIKLWKSD 311 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECT------TTCCEEEEECC
T ss_pred cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEcc------CCccEEEecCC
Confidence 999999999999999999999888875 56789999999999999999854 24799999875
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.8e-44 Score=312.00 Aligned_cols=282 Identities=21% Similarity=0.341 Sum_probs=240.3
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecC------------------CCCEEEEEEcCCCC
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH------------------ADSVDQLCWDPKHA 79 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h------------------~~~v~~l~~~~~~~ 79 (314)
+|.+.|.+++|+|||++|++|+ |++++||++.... ....+.+| ...|.+++|+|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg- 135 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGS----LVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG- 135 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCC----EEEEECC-----------------CCCCBEEEEEECTTS-
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCC----EEEEecCccccccccccccccccCCCceeEEEEEECCCC-
Confidence 6999999999999999999977 7899999987532 11223332 2348999999974
Q ss_pred CEEEEEeCCCcEEEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEec
Q 021319 80 DLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWN 158 (314)
Q Consensus 80 ~~l~s~~~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 158 (314)
++|++|+.|++|++||+.+++....+.. ...+.+++|+|+++.|++++.|+.+++||+++.+..........+..++++
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~ 215 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS 215 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEE
Confidence 6999999999999999999887766543 445678999999999999999999999999998887777777788999999
Q ss_pred c-CCCeEEEEcCCceEEEEeCCCCCceeee-------eecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCc-------
Q 021319 159 M-TGEMFFLTTGNGTVEVLTYPSLRPLDTV-------VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM------- 223 (314)
Q Consensus 159 ~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~------- 223 (314)
| ++..+++++.++.+++|+....+.+..+ .+|...|++++|+|++++|++|+.|+.|++||+++.
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 9 8899999999999999999877655544 478889999999999999999999999999998753
Q ss_pred -----EEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcC------CCCeeEE
Q 021319 224 -----LCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNP------KYNLLAY 291 (314)
Q Consensus 224 -----~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~------~~~~la~ 291 (314)
.+...+.+|...|.+++|+|++++|++|+.|+.|++||..+++.+..+. |...|.+++|+| ++++||+
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~s 375 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFAT 375 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEE
T ss_pred CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEE
Confidence 3456677888899999999999999999999999999999999888775 577899999986 6889999
Q ss_pred EecCCcccccccceEEeccccC
Q 021319 292 AGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 292 ~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+|.| |++|||++++
T Consensus 376 gs~D--------g~i~iW~~~~ 389 (393)
T 1erj_A 376 GSGD--------CKARIWKYKK 389 (393)
T ss_dssp EETT--------SEEEEEEEEE
T ss_pred ECCC--------CcEEECcccc
Confidence 9988 6899999854
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-44 Score=307.54 Aligned_cols=289 Identities=20% Similarity=0.319 Sum_probs=227.2
Q ss_pred cceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEe-ec-CCCCEEEEEEcCCCCCEEEEEeCCC
Q 021319 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RG-HADSVDQLCWDPKHADLIATASGDK 89 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~~l~s~~~D~ 89 (314)
..+.+.+|.+.|.+++|+|+ +|+||+.|++|++|++..... .....+ .+ |...|.+++|+|++ ++|++|+.|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~--~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~ 80 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF--TLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDS 80 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC--EEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTS
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe--EEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCC
Confidence 35678899999999999987 999999999999999875321 112223 34 99999999999974 7999999999
Q ss_pred cEEEEeCCCC-------ceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCC----eEeeee-ccCcceeeEE
Q 021319 90 TVRLWDARSG-------KCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKF----KPIHRR-KFGYEVNEIA 156 (314)
Q Consensus 90 ~v~iwd~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~-~~~~~~~~~~ 156 (314)
+|++||.... ++...+. ....+.+++|+|++++|++++.|+.+++||++.. +.+... .+...+.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 9999998532 2222222 3445678999999999999999999999999532 333333 3556799999
Q ss_pred eccCCCeEEEEcCCceEEEEeCCCC--CceeeeeecccceEEEEECCC--CCEEEEeeCCCeEEEeeCCCc--------E
Q 021319 157 WNMTGEMFFLTTGNGTVEVLTYPSL--RPLDTVVAHTAGCYCIAIDPM--GRYFAVGSADSLVSLWDISEM--------L 224 (314)
Q Consensus 157 ~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~i~~i~~~~~--~~~l~t~~~dg~i~vwd~~~~--------~ 224 (314)
|+|++..+++++.|+.+++|+.... +++..+.+|...|++++|+|+ +.+|++|+.|++|++||+... .
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 9999999999999999999987654 566778899999999999998 678999999999999998654 4
Q ss_pred EEEEeee-cccCeEEEEEccCCcEEEEecCCceEEEEECCCCC--eEEEE--eccC-ccceeEEcC--CCCeeEEEecCC
Q 021319 225 CVRTFTK-LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGR--TVHQI--PCRA-AMNSVEWNP--KYNLLAYAGDDK 296 (314)
Q Consensus 225 ~~~~~~~-~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~--~~~~~--~~~~-~i~~v~~~~--~~~~la~~~~d~ 296 (314)
+...+.. |..+|.+++|+|++ +|++++.|+.|++|+..+++ .+... .+.. .|++++|+| ++++||++|.|
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D- 318 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD- 318 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT-
T ss_pred EeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCC-
Confidence 5555554 78899999999765 89999999999999998764 23232 2344 799999999 68999999988
Q ss_pred cccccccceEEeccccCC
Q 021319 297 NKYQADEGVFRIYGFENA 314 (314)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~ 314 (314)
|+++||+++++
T Consensus 319 -------g~v~~W~~~~~ 329 (330)
T 2hes_X 319 -------GIVNFWSLEKA 329 (330)
T ss_dssp -------SEEEEEEC---
T ss_pred -------CcEEEEEeccC
Confidence 68999999763
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.5e-44 Score=327.78 Aligned_cols=293 Identities=17% Similarity=0.274 Sum_probs=237.1
Q ss_pred cceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCcee---------------------------------
Q 021319 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVK--------------------------------- 58 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~--------------------------------- 58 (314)
..+.+.+|...|++++|+|+|++|+||+.|++|+|||+.........
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 44678899999999999999999999999999999998532110000
Q ss_pred ---------eEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeC
Q 021319 59 ---------DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNR 128 (314)
Q Consensus 59 ---------~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~ 128 (314)
...+.+|...|.+++|+|++...|++|+.|++|++||..++++...+.. ...+.+++|+|++++|++++.
T Consensus 131 v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 131 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp EEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence 0124578888888888887655799999999999999988877665543 345678999999999999999
Q ss_pred CCcEEEEEccCCeEeeee--------ccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCcee---------------
Q 021319 129 DDELTILDVRKFKPIHRR--------KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLD--------------- 185 (314)
Q Consensus 129 d~~i~i~d~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------------- 185 (314)
|++|++||+++.+.+... .+...+.+++|+|++..+++++.|+.+++|+....+.+.
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence 999999999887776554 355679999999999999999999999999987544322
Q ss_pred ----------------------------eeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee-------
Q 021319 186 ----------------------------TVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT------- 230 (314)
Q Consensus 186 ----------------------------~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~------- 230 (314)
.+.+|...|++++|+|++++|++++.|++|++||+.++.+...+.
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v 370 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 370 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCE
T ss_pred EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceE
Confidence 234788899999999999999999999999999987654432210
Q ss_pred ---------------------------------------------------------------------------ecccC
Q 021319 231 ---------------------------------------------------------------------------KLEWP 235 (314)
Q Consensus 231 ---------------------------------------------------------------------------~~~~~ 235 (314)
.+...
T Consensus 371 ~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~ 450 (611)
T 1nr0_A 371 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYN 450 (611)
T ss_dssp EEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSC
T ss_pred EEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCC
Confidence 12234
Q ss_pred eEEEEEccCCcEEEEecCCceEEEEECCCCCe--EEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 236 VRTISFSHTGDYIASASEDLFIDISNVHTGRT--VHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 236 v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~--~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+.+++|+|+|++||+|+.|+.|++||+.++.. +....+...|++|+|+|++++||+++.|+ ++++|+++
T Consensus 451 v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~--------~v~~w~~~ 521 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSR--------KVIPYSVA 521 (611)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTS--------CEEEEEGG
T ss_pred ceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCC--------CEEEEEcC
Confidence 67899999999999999999999999987643 23345778999999999999999999885 67777764
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.8e-44 Score=328.88 Aligned_cols=286 Identities=21% Similarity=0.348 Sum_probs=236.3
Q ss_pred eeeecccccEEEEEECCCCC-EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 14 REYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~-~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
..+.+|...|++++|+|++. .|+||+.|++|++||..+. .....+.+|...|.+++|+|++ ++|++++.|++|+
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~----~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~ 215 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF----KFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIV 215 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB----EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEE
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC----eEeeeeccccCceEEEEECCCC-CEEEEEECCCcEE
Confidence 45789999999999999987 5999999999999997642 2334678999999999999974 6999999999999
Q ss_pred EEeCCCCceeeeEE--------ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee------------------
Q 021319 93 LWDARSGKCSQQAE--------LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR------------------ 146 (314)
Q Consensus 93 iwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~------------------ 146 (314)
+||..++++...+. +...+.+++|+|++++|++++.|+++++||+++.+.+...
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 295 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC
Confidence 99999888766552 3456778999999999999999999999999876654322
Q ss_pred --------------------------ccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeee-------------
Q 021319 147 --------------------------KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTV------------- 187 (314)
Q Consensus 147 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------------- 187 (314)
.+...+.+++|+|+++.+++++.++.+++|+....+....+
T Consensus 296 ~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~ 375 (611)
T 1nr0_A 296 ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 375 (611)
T ss_dssp CEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEE
Confidence 12345788999999999999999999999997543221110
Q ss_pred ---------------------------------------------------------------------eecccceEEEE
Q 021319 188 ---------------------------------------------------------------------VAHTAGCYCIA 198 (314)
Q Consensus 188 ---------------------------------------------------------------------~~~~~~i~~i~ 198 (314)
..|...+.+++
T Consensus 376 s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va 455 (611)
T 1nr0_A 376 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVA 455 (611)
T ss_dssp CTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEE
T ss_pred CCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEE
Confidence 01234578999
Q ss_pred ECCCCCEEEEeeCCCeEEEeeCCCcEE--EEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCC-CCeEEE--Ee-
Q 021319 199 IDPMGRYFAVGSADSLVSLWDISEMLC--VRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHT-GRTVHQ--IP- 272 (314)
Q Consensus 199 ~~~~~~~l~t~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~-~~~~~~--~~- 272 (314)
|+|+|++||+|+.|++|++||+..... ++. ..|...|.+++|+|+|++||+++.|+.|++|++.+ ++.+.. +.
T Consensus 456 ~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~ 534 (611)
T 1nr0_A 456 LSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTF 534 (611)
T ss_dssp ECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCC
T ss_pred EeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeee
Confidence 999999999999999999999977543 344 67888999999999999999999999999999987 554432 22
Q ss_pred ccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 273 CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 273 ~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
|...|++|+|+|++++||++|.| |++|||+++.
T Consensus 535 H~~~V~~v~fspdg~~lasgs~D--------~~v~lW~~~~ 567 (611)
T 1nr0_A 535 HTAKVACVSWSPDNVRLATGSLD--------NSVIVWNMNK 567 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTC
T ss_pred cccceeEEEECCCCCEEEEEECC--------CcEEEEECCC
Confidence 67789999999999999999988 5789999853
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.7e-43 Score=297.87 Aligned_cols=291 Identities=18% Similarity=0.272 Sum_probs=243.3
Q ss_pred ccceeeecccccEEEEEECCC-CCEEEEeeCCCcEEEeecCCCCCC-ceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC
Q 021319 11 LHSREYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHG-KVKDIELRGHADSVDQLCWDPKHADLIATASGD 88 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~-g~~l~s~~~D~~v~iw~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D 88 (314)
....+|.||.+.|++|+|+|+ +++|+|||.|++|+|||+...... ......+.+|...|.+++|+|++ .+|++++.|
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d 107 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-QFALSGSWD 107 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS-SEEEEEETT
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC-CEEEEEccc
Confidence 344568999999999999998 689999999999999999764322 23344678999999999999974 799999999
Q ss_pred CcEEEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee--ccCcceeeEEeccCC--Ce
Q 021319 89 KTVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR--KFGYEVNEIAWNMTG--EM 163 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~--~~ 163 (314)
+.|++|+............ ......+.+.++++.+++++.|+.+.+||+......... .+...+..+.+++.+ ..
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 9999999988876655443 344556788999999999999999999999876554332 234567788887765 46
Q ss_pred EEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEcc
Q 021319 164 FFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSH 243 (314)
Q Consensus 164 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp 243 (314)
+++++.++.+++|+....+....+.+|...|++++|+|++++|++|+.||.|++||+++.+++..+..+ ..+.+++|+|
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~ 266 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 266 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECS
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCC
Confidence 778889999999999998888888899999999999999999999999999999999999988887654 5799999999
Q ss_pred CCcEEEEecCCceEEEEECCCCCeEEEEe----------ccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 244 TGDYIASASEDLFIDISNVHTGRTVHQIP----------CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 244 ~~~~l~s~s~d~~v~v~~~~~~~~~~~~~----------~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
++.++ +++.|+.|++||+.++..+..+. +...|++++|+|++++||+|+.| |+++||+++
T Consensus 267 ~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D--------g~v~iW~~~ 336 (340)
T 4aow_A 267 NRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD--------NLVRVWQVT 336 (340)
T ss_dssp SSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT--------SCEEEEEEE
T ss_pred CCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC--------CEEEEEeCC
Confidence 87655 56679999999999887766553 34579999999999999999987 689999875
No 18
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-43 Score=302.55 Aligned_cols=289 Identities=19% Similarity=0.310 Sum_probs=254.2
Q ss_pred ccceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc
Q 021319 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~ 90 (314)
.....+.+|.+.|++++|+|++++|++|+.|+.|++||+.... ....+.+|...|.+++|+|+ +++|++++.|+.
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~ 97 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE----RLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYS 97 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC----EEEEECCCSSCEEEEEECTT-SSEEEEEETTTE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch----hhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCe
Confidence 3456689999999999999999999999999999999987532 33467889999999999997 479999999999
Q ss_pred EEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCC-----CcEEEEEccCCeEe-----------eee-ccC--cc
Q 021319 91 VRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD-----DELTILDVRKFKPI-----------HRR-KFG--YE 151 (314)
Q Consensus 91 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~-----------~~~-~~~--~~ 151 (314)
|++||+.++++.........+..++|+|+++.+++++.+ +.+.+||++..... ... .+. ..
T Consensus 98 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 98 IKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred EEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 999999999988888877788899999999999999999 99999998754321 111 111 27
Q ss_pred eeeEEeccCCCeEEEEcCCceEEEEeCCC-CCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee
Q 021319 152 VNEIAWNMTGEMFFLTTGNGTVEVLTYPS-LRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (314)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~ 230 (314)
+.+++|+++++.++++..+|.+.+|+... .+.+..+..|...+.+++|+|++++|++++.|+.|++||++++..+..+.
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 88999999999999999999999999987 66777888899999999999999999999999999999999998888776
Q ss_pred ecccCeEEEEEccCCcEEEEecCCc--------------eEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecC
Q 021319 231 KLEWPVRTISFSHTGDYIASASEDL--------------FIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 231 ~~~~~v~~~~~sp~~~~l~s~s~d~--------------~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d 295 (314)
+..++..++|+|+++++++++.++ .+++||..+++.+..+. +...|++++|+|++++|++++.|
T Consensus 258 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 258 -TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp -CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred -CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC
Confidence 677899999999999999999988 89999999999988876 56789999999999999999977
Q ss_pred CcccccccceEEeccccC
Q 021319 296 KNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~ 313 (314)
|+++||++++
T Consensus 337 --------g~v~iw~~~~ 346 (369)
T 3zwl_B 337 --------GFIRLHHFEK 346 (369)
T ss_dssp --------SEEEEEEECH
T ss_pred --------CeEEEEECcc
Confidence 6899999853
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-42 Score=315.43 Aligned_cols=279 Identities=27% Similarity=0.415 Sum_probs=241.9
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
.+.+.+|.+.|.+++|+|++++|++++.|++|++|+.+.. ....+.+|...|.+++|+|++ .++++++.|+.|+
T Consensus 296 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-----~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 296 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-----HLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVK 369 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-----EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEE
T ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----eeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEE
Confidence 3557899999999999999999999999999999997642 223567899999999999974 6899999999999
Q ss_pred EEeCCCCceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee-eccCcceeeEEeccCCCeEEEEcCC
Q 021319 93 LWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGN 170 (314)
Q Consensus 93 iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
+||.. ++...... ....+.+++|+|++++|++++.|+.+++||... +.+.. ..+...+.+++|+|++..+++++.+
T Consensus 370 ~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 370 LWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EEETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC-CEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC-CEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 99964 55554443 345567899999999999999999999999644 44333 3456778999999999999999999
Q ss_pred ceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEE
Q 021319 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 250 (314)
Q Consensus 171 g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 250 (314)
+.+++|+. ..+.+..+.+|...+++++|+|++++||+++.|+.|++||. ++++++.+.+|..+|.+++|+|++++||+
T Consensus 448 ~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 525 (577)
T 2ymu_A 448 KTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS 525 (577)
T ss_dssp SEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEE
Confidence 99999996 44566778899999999999999999999999999999995 67788899999999999999999999999
Q ss_pred ecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEecc
Q 021319 251 ASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYG 310 (314)
Q Consensus 251 ~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~ 310 (314)
++.|+.|++||. +++.+..+. |...|++++|+|++++|+++|.| |+++||+
T Consensus 526 ~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D--------~~i~~Wd 577 (577)
T 2ymu_A 526 ASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSD--------KTVKLWN 577 (577)
T ss_dssp EETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT--------SCEEEEC
T ss_pred EECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC--------CEEEEeC
Confidence 999999999995 677777765 57799999999999999999988 5788996
No 20
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.3e-43 Score=302.60 Aligned_cols=286 Identities=14% Similarity=0.169 Sum_probs=234.2
Q ss_pred ceeeecccccEEEEEECCCC-CEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 13 SREYTGHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g-~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
.+.+.+|.+.|++++|+|++ ++|++|+.|+.|+||++.... ........+|...|.+++|+|.++++|++++.|+.|
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--KTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--CEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--cceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 35678999999999999999 999999999999999997543 223334457999999999999656799999999999
Q ss_pred EEEeCCCCceeeeEEec---CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee-ccCcceeeEEeccCCC-eEEE
Q 021319 92 RLWDARSGKCSQQAELS---GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGE-MFFL 166 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~ 166 (314)
++||+.+.......... ..+.+++|+|++++|++++.|+.|.+||++ .+++... .+...+.+++|+|+++ .+++
T Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 144 TLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 99999864332222222 446789999999999999999999999995 4444443 4567899999999999 8999
Q ss_pred EcCCceEEEEeCCC----CCceeeeeecccceEEEEECC-CCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc--------
Q 021319 167 TTGNGTVEVLTYPS----LRPLDTVVAHTAGCYCIAIDP-MGRYFAVGSADSLVSLWDISEMLCVRTFTKLE-------- 233 (314)
Q Consensus 167 ~~~~g~~~~~~~~~----~~~~~~~~~~~~~i~~i~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~-------- 233 (314)
++.++.+++|+... ...+..+ .|...+++++|+| ++++|++++.|+.|++||++++.++..+..+.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccccc
Confidence 99999999999876 3334334 7999999999999 99999999999999999998876655555432
Q ss_pred ---------cCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe---ccCccceeEEcCCCCeeEEEecCCccccc
Q 021319 234 ---------WPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP---CRAAMNSVEWNPKYNLLAYAGDDKNKYQA 301 (314)
Q Consensus 234 ---------~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~---~~~~i~~v~~~~~~~~la~~~~d~~~~~~ 301 (314)
..+..++|+|++++ +++.|+.|++||+.+++.+..+. +...+..++|+|++++||+++ |
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d------ 372 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-G------ 372 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-T------
T ss_pred ceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-C------
Confidence 24555778888877 88999999999999999988886 345677789999999999997 6
Q ss_pred ccceEEeccccC
Q 021319 302 DEGVFRIYGFEN 313 (314)
Q Consensus 302 ~~~~~~~~~~~~ 313 (314)
|.++||++++
T Consensus 373 --~~i~iw~~~~ 382 (383)
T 3ei3_B 373 --FNILIWNRED 382 (383)
T ss_dssp --TEEEEEECC-
T ss_pred --CcEEEEecCC
Confidence 5899999975
No 21
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.3e-43 Score=304.05 Aligned_cols=291 Identities=16% Similarity=0.148 Sum_probs=248.2
Q ss_pred cceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCC--ceeeEEeecCCCCEEEEEEcCC---CC---CEEE
Q 021319 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG--KVKDIELRGHADSVDQLCWDPK---HA---DLIA 83 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~--~~~~~~~~~h~~~v~~l~~~~~---~~---~~l~ 83 (314)
..+.+.+|.+.|++++|+| ++|++|+.||.|++|+++..... ......+.+|...|.+++|+|+ ++ .+|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 4566789999999999999 89999999999999999764310 1123467799999999999986 24 5899
Q ss_pred EEeCCCcEEEEeCCCCce-----eeeEEec------CceEEEEEc----cCCCE-EEEEeCCCcEEEEEccC------Ce
Q 021319 84 TASGDKTVRLWDARSGKC-----SQQAELS------GENINITYK----PDGTH-IAVGNRDDELTILDVRK------FK 141 (314)
Q Consensus 84 s~~~D~~v~iwd~~~~~~-----~~~~~~~------~~~~~~~~~----~~~~~-l~~~~~d~~i~i~d~~~------~~ 141 (314)
+++.|+.|++||+.+++. ....... ..+.+++|+ |+++. |++++.|+.+.+||++. .+
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999988775 4444433 667789999 99999 99999999999999987 44
Q ss_pred Eee-----eec--------cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeee---c---ccceEEEEECCC
Q 021319 142 PIH-----RRK--------FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA---H---TAGCYCIAIDPM 202 (314)
Q Consensus 142 ~~~-----~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~---~~~i~~i~~~~~ 202 (314)
.+. ... +...+.+++|+|++ .+++++.++.+++|+....+++..+.. | ...+.+++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 333 332 35678999999999 999999999999999998888888888 8 899999999999
Q ss_pred CCEEEEeeCC---CeEEEeeCCCcEEEEEeee-------------cccCeEEEEEccCCcEEEEecCCceEEEEECCCCC
Q 021319 203 GRYFAVGSAD---SLVSLWDISEMLCVRTFTK-------------LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGR 266 (314)
Q Consensus 203 ~~~l~t~~~d---g~i~vwd~~~~~~~~~~~~-------------~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~ 266 (314)
+++|++++.| |.|++||+++++.+..+.. |..+|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 9999999999 9999999999999999888 89999999999999999999999999999999999
Q ss_pred eEEEEe-------c---------------cCccceeEEcCCC----------CeeEEEecCCcccccccceEEeccccC
Q 021319 267 TVHQIP-------C---------------RAAMNSVEWNPKY----------NLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 267 ~~~~~~-------~---------------~~~i~~v~~~~~~----------~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
.+..+. + ...|++++|+|++ ++|++++.| |.++||+++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d--------g~i~iw~~~~ 395 (397)
T 1sq9_A 325 RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD--------RSIRWFREAG 395 (397)
T ss_dssp EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT--------TEEEEEEEEC
T ss_pred eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCC--------CcEEEEEcCC
Confidence 988887 3 6789999999998 799999977 6899999864
No 22
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.9e-42 Score=319.38 Aligned_cols=289 Identities=19% Similarity=0.308 Sum_probs=242.7
Q ss_pred eeeecccccEEEEEECCCC-CEEEEeeCCCcEEEeecCCCCCC-ceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 14 REYTGHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHG-KVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g-~~l~s~~~D~~v~iw~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
..+.+|.+.|++|+|+|++ ++|+|||.|++|++|++...... ......+.+|...|.+++|+|++ .+|+||+.|++|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v 454 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGEL 454 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcE
Confidence 4578999999999999875 78999999999999998753321 22344688999999999999974 799999999999
Q ss_pred EEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee----ccCcceeeEEeccCC--CeE
Q 021319 92 RLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR----KFGYEVNEIAWNMTG--EMF 164 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~ 164 (314)
++||+.++.+...+.. ...+.+++|+|+++.|++++.|++|++||.......... .+...+.++.|+|++ ..+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 9999999987766643 455678999999999999999999999998665433221 234468999999987 578
Q ss_pred EEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccC
Q 021319 165 FLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHT 244 (314)
Q Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~ 244 (314)
++++.++.+++|++...+....+.+|...|++++|+|++++|++|+.||.|++||+.+++++..+.. ...+.+++|+|+
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~ 613 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPN 613 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSS
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCC
Confidence 9999999999999998888888889999999999999999999999999999999999988877654 457999999999
Q ss_pred CcEEEEecCCceEEEEECCCCCeEEEEecc--------------------CccceeEEcCCCCeeEEEecCCcccccccc
Q 021319 245 GDYIASASEDLFIDISNVHTGRTVHQIPCR--------------------AAMNSVEWNPKYNLLAYAGDDKNKYQADEG 304 (314)
Q Consensus 245 ~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~--------------------~~i~~v~~~~~~~~la~~~~d~~~~~~~~~ 304 (314)
+.+|++++. +.|++||+.+++.+..+... ..+++++|+|++.+|++++.| |
T Consensus 614 ~~~l~~~~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~D--------g 684 (694)
T 3dm0_A 614 RYWLCAATE-HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTD--------G 684 (694)
T ss_dssp SSEEEEEET-TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETT--------S
T ss_pred CcEEEEEcC-CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCC--------C
Confidence 998887765 45999999998877665311 126789999999999999987 6
Q ss_pred eEEeccccC
Q 021319 305 VFRIYGFEN 313 (314)
Q Consensus 305 ~~~~~~~~~ 313 (314)
++|||++..
T Consensus 685 ~i~iW~i~~ 693 (694)
T 3dm0_A 685 VIRVWGIGR 693 (694)
T ss_dssp EEEEEEC--
T ss_pred eEEEEeccC
Confidence 899999863
No 23
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-43 Score=308.01 Aligned_cols=289 Identities=14% Similarity=0.212 Sum_probs=245.8
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA 96 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~ 96 (314)
..|...|++++|+|++++|++|+.|+.|++|++............+.+|...|.+++|+|+++++|++++.|+.|++||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 36899999999999999999999999999999976322222445678999999999999986689999999999999999
Q ss_pred CCCc------eeeeE----EecCceEEEEEccC-CCEEEEEeCCCcEEEEEccCCeEeeeecc-------CcceeeEEec
Q 021319 97 RSGK------CSQQA----ELSGENINITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRRKF-------GYEVNEIAWN 158 (314)
Q Consensus 97 ~~~~------~~~~~----~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~~~~ 158 (314)
.++. ..... .....+.+++|+|+ +.++++++.|+.|.+||+++.+.+..... ...+.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 8876 32221 23445678999999 78999999999999999999888776654 5679999999
Q ss_pred cCC-CeEEEEcCCc---eEEEEeCCCC-Cceeeee-ecccceEEEEECC-CCCEEEEeeCCCeEEEeeCCCcEEEEEeee
Q 021319 159 MTG-EMFFLTTGNG---TVEVLTYPSL-RPLDTVV-AHTAGCYCIAIDP-MGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (314)
Q Consensus 159 ~~~-~~~~~~~~~g---~~~~~~~~~~-~~~~~~~-~~~~~i~~i~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~ 231 (314)
|++ ..++++..++ .+++|+.... +++..+. +|...+++++|+| ++++|++++.||.|++||+++++++..+..
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 997 5788888888 9999999875 5667777 8999999999999 999999999999999999999999999999
Q ss_pred cccCeEEEEEccCC-cEEEEecCCceEEEEECCCCCeEEEE---------------e---------------------cc
Q 021319 232 LEWPVRTISFSHTG-DYIASASEDLFIDISNVHTGRTVHQI---------------P---------------------CR 274 (314)
Q Consensus 232 ~~~~v~~~~~sp~~-~~l~s~s~d~~v~v~~~~~~~~~~~~---------------~---------------------~~ 274 (314)
|...|.+++|+|++ .+|++++.|+.|++|++.+++..... . +.
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYG 383 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcccc
Confidence 99999999999999 89999999999999999876532111 0 24
Q ss_pred CccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 275 AAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 275 ~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
.++++++|+|++++||+++.| |+++||+++.
T Consensus 384 ~~~~~~~~s~dg~~la~~~~d--------~~v~~w~~~~ 414 (416)
T 2pm9_A 384 EPSPAAHWAFGGKLVQITPDG--------KGVSITNPKI 414 (416)
T ss_dssp CCSCCCEEETTTEEECBCTTS--------SCBCCBCCCC
T ss_pred CCccceEEeeCCeEEEEeCCC--------CeEEEEEecc
Confidence 567899999999999999977 6788999864
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.9e-41 Score=284.75 Aligned_cols=284 Identities=15% Similarity=0.207 Sum_probs=244.2
Q ss_pred eecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCC-ceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG-KVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 16 ~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
..+|.+.|++++|+|++++|++++ |+.|++|+++..... ........+|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSIW 124 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT-SSEEEEEESSSEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEE
Confidence 347999999999999999999999 999999999764322 1222233379999999999997 4689999999999999
Q ss_pred eCCCCce--eeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcCC
Q 021319 95 DARSGKC--SQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGN 170 (314)
Q Consensus 95 d~~~~~~--~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
|+.+++. ...... ......++|+|+++.+++++.++.+.+||+++.+.+.... +...+.++.|+|+++.+++++.+
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 9998773 233322 3446789999999999999999999999999988877764 46679999999999999999999
Q ss_pred ceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEE
Q 021319 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 250 (314)
Q Consensus 171 g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 250 (314)
+.+++|+....+.+..+ .+...+.+++|+|+++++++++.++.|++||+.+.... .+..|..++.+++|+|++++|++
T Consensus 205 g~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp SEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEE
Confidence 99999999887766554 46788999999999999999999999999999887654 56678889999999999999999
Q ss_pred ecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 251 ASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 251 ~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
++.|+.+++|++.+++.+....+...+++++|+|++++|++++.| |.++||++
T Consensus 283 ~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~iw~~ 335 (337)
T 1gxr_A 283 TGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGD--------KKATVYEV 335 (337)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETT--------SCEEEEEE
T ss_pred ecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCC--------CeEEEEEE
Confidence 999999999999999988877788899999999999999999977 57889986
No 25
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-42 Score=306.85 Aligned_cols=289 Identities=17% Similarity=0.198 Sum_probs=227.5
Q ss_pred eeeecccccEEEEEECCC-CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 14 REYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~-g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
+...+|...|++|+|+|. +++||+|+.||.|+|||++.... .....+.+|.+.|.+++|+|.++++|+||+.|++|+
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~--~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK--PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC--CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc--eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 445678999999999995 67899999999999999976432 233456799999999999997778999999999999
Q ss_pred EEeCCCCceeeeEEecC---ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCC-eEEEEc
Q 021319 93 LWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE-MFFLTT 168 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 168 (314)
+||++++.......... ...+++|+|++++|++|+.|+.|.+||++......-..+...+.+++|+|.+. .+++++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEec
Confidence 99998765433322222 23468899999999999999999999987543222233566799999999986 566788
Q ss_pred CCceEEEEeCCCCCcee---eeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeeccc------CeEEE
Q 021319 169 GNGTVEVLTYPSLRPLD---TVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEW------PVRTI 239 (314)
Q Consensus 169 ~~g~~~~~~~~~~~~~~---~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~------~v~~~ 239 (314)
.++.+++|++...+... ...+|...|++++|+|++++|++++.||.|++||+.++.+...+..|.. .+...
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 99999999987655333 3357899999999999999999999999999999998877666654432 23345
Q ss_pred EEccCCcEEEEec------------CCceEEEEECCCCCeEEEEe--ccCcccee-EEcCCCCeeEEEecCCcccccccc
Q 021319 240 SFSHTGDYIASAS------------EDLFIDISNVHTGRTVHQIP--CRAAMNSV-EWNPKYNLLAYAGDDKNKYQADEG 304 (314)
Q Consensus 240 ~~sp~~~~l~s~s------------~d~~v~v~~~~~~~~~~~~~--~~~~i~~v-~~~~~~~~la~~~~d~~~~~~~~~ 304 (314)
.|+|++.++++++ .++.|++||.++++.+..+. +...|.++ +|||++++||+|+ | +
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d--------~ 421 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-G--------Y 421 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-S--------S
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-C--------C
Confidence 6777777666654 23579999999999888763 45678887 7999999999876 4 4
Q ss_pred eEEeccccC
Q 021319 305 VFRIYGFEN 313 (314)
Q Consensus 305 ~~~~~~~~~ 313 (314)
+++||++++
T Consensus 422 ~i~iW~~~~ 430 (435)
T 4e54_B 422 HILIWSQQE 430 (435)
T ss_dssp EEEECCCC-
T ss_pred cEEEEECCc
Confidence 799999975
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.4e-41 Score=305.21 Aligned_cols=282 Identities=26% Similarity=0.418 Sum_probs=242.7
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
.+.+.+|...|++++|+|+++.|++++.|+.|++|+.+. . ....+.+|...|.+++|+|++ ..+++++.|++|+
T Consensus 255 ~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~----~-~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 255 LQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG----Q-LLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVK 328 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS----C-EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEE
T ss_pred EEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC----c-EEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEE
Confidence 356789999999999999999999999999999999643 1 233578999999999999974 6899999999999
Q ss_pred EEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee-eccCcceeeEEeccCCCeEEEEcCCc
Q 021319 93 LWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR-RKFGYEVNEIAWNMTGEMFFLTTGNG 171 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 171 (314)
+||.................+++|+|+++.+++++.|+.+++||... +.+.. ..+...+.+++|+|+++.+++++.++
T Consensus 329 ~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~ 407 (577)
T 2ymu_A 329 LWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 407 (577)
T ss_dssp EEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-CEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-CEEEEecCCCCCeEEEEECCCCCEEEEEeCCC
Confidence 99987655443333455677899999999999999999999999643 44433 34567799999999999999999999
Q ss_pred eEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEe
Q 021319 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 251 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 251 (314)
.+++|+. ..+.+..+.+|...+++++|+|++++|++++.|+.|++||. +++.+..+.+|..+|.+++|+|++++||++
T Consensus 408 ~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 408 TVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA 485 (577)
T ss_dssp EEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 9999995 45567778899999999999999999999999999999996 566778888999999999999999999999
Q ss_pred cCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 252 SEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 252 s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+.|+.|++|+. +++.+..+. |...|++++|+|++++||+++.| |++|||+.+
T Consensus 486 ~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d--------g~v~lwd~~ 538 (577)
T 2ymu_A 486 SDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD--------KTVKLWNRN 538 (577)
T ss_dssp ETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT--------SEEEEECTT
T ss_pred eCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECc--------CEEEEEeCC
Confidence 99999999995 677777765 56789999999999999999987 578899864
No 27
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.9e-42 Score=295.68 Aligned_cols=281 Identities=14% Similarity=0.146 Sum_probs=222.6
Q ss_pred ccEEEEEECCCCCEEEEeeCCC-------cEEEeecCCCCCCc------eeeEEeecCCCCEEEEEEcCCCCCEEEEE--
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQ-------TARVWHIEPHGHGK------VKDIELRGHADSVDQLCWDPKHADLIATA-- 85 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~-------~v~iw~~~~~~~~~------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~-- 85 (314)
-+|++++|+|||++|++||.|. .|++|+++...... .....+.+|.+.|.++++++ +.+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEEEC
Confidence 4799999999999999998654 59999997644321 12345778999999988764 355554
Q ss_pred ---------eCCCcEEEEeCCCCceeee----EEe------cCceEEEEEccCCCEEEEEe--CCCcEEEEEccCCeEee
Q 021319 86 ---------SGDKTVRLWDARSGKCSQQ----AEL------SGENINITYKPDGTHIAVGN--RDDELTILDVRKFKPIH 144 (314)
Q Consensus 86 ---------~~D~~v~iwd~~~~~~~~~----~~~------~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~ 144 (314)
+.|+.+|+|++........ ... ......++|+|||+++++++ .|++|++||+++.+++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 4578899998765432111 111 11245689999999987654 68999999999999988
Q ss_pred eeccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCcee--eeeecccceEEEEECCCCCEEEEeeCCC----eEEEe
Q 021319 145 RRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLD--TVVAHTAGCYCIAIDPMGRYFAVGSADS----LVSLW 218 (314)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~i~~i~~~~~~~~l~t~~~dg----~i~vw 218 (314)
..++..++.+++|+|++..+++++.++ +.+|.....+.+. ....|...+.+++|+|+++++++++.|+ .+++|
T Consensus 172 ~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~ 250 (365)
T 4h5i_A 172 EIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKI 250 (365)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEE
T ss_pred EeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeec
Confidence 888888999999999999998887655 5555554444332 3456888899999999999999999887 68899
Q ss_pred eCCCcEE----EEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe--ccCccceeEEcCCCCeeEEE
Q 021319 219 DISEMLC----VRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP--CRAAMNSVEWNPKYNLLAYA 292 (314)
Q Consensus 219 d~~~~~~----~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~--~~~~i~~v~~~~~~~~la~~ 292 (314)
|+..... ...+.+|..+|.+++|+|+|++||+|+.|+.|+|||+.+++.+..+. |...|++|+|+|++++||++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 251 SIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp EEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEE
T ss_pred ccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEE
Confidence 9876543 34567788899999999999999999999999999999999998863 67899999999999999999
Q ss_pred ecCCcccccccceEEeccccC
Q 021319 293 GDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 293 ~~d~~~~~~~~~~~~~~~~~~ 313 (314)
|.| +++|||++.+
T Consensus 331 S~D--------~tvrvw~ip~ 343 (365)
T 4h5i_A 331 SAA--------NTIHIIKLPL 343 (365)
T ss_dssp ETT--------SEEEEEECCT
T ss_pred eCC--------CeEEEEEcCC
Confidence 988 6999999854
No 28
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.4e-42 Score=292.91 Aligned_cols=297 Identities=12% Similarity=0.173 Sum_probs=241.1
Q ss_pred eeeeeccc-eeeecccccEEEEEECCC----CCEEEEeeCCCcEEEeecCCCCCCc-eeeEEeecCCCCEEEEEEcCCC-
Q 021319 6 IPFKNLHS-REYTGHKKKVHSVAWNCT----GTKLASGSVDQTARVWHIEPHGHGK-VKDIELRGHADSVDQLCWDPKH- 78 (314)
Q Consensus 6 ~~~~~~~~-~~~~gH~~~V~~v~~s~~----g~~l~s~~~D~~v~iw~~~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~- 78 (314)
+||+.... ....+|.+.|++++|+|+ ...+++++.++.|++|++.....-. ........|...|.+++|+|+.
T Consensus 3 ~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 82 (366)
T 3k26_A 3 CKYSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSN 82 (366)
T ss_dssp --CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTT
T ss_pred ceeEEEEEEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCC
Confidence 45555443 334589999999999984 4567777777899999997533211 1111122367889999999974
Q ss_pred --CCEEEEEeCCCcEEEEeCCCCceeeeEE-ecCceEEEEEcc-CCCEEEEEeCCCcEEEEEccCCeEeeee----ccCc
Q 021319 79 --ADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRR----KFGY 150 (314)
Q Consensus 79 --~~~l~s~~~D~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~ 150 (314)
+.+|++|+.|+.|++||+.+++...... ....+.+++|+| ++++|++++.|+.|++||+++.+.+... .+..
T Consensus 83 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 83 TSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp TCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS
T ss_pred CCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC
Confidence 2589999999999999999998877766 455677899999 9999999999999999999998887765 4567
Q ss_pred ceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeee----------------------------ecccceEEEEECCC
Q 021319 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVV----------------------------AHTAGCYCIAIDPM 202 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----------------------------~~~~~i~~i~~~~~ 202 (314)
.+.+++|+|++..+++++.+|.+++|+....+....+. .|...+.+++|+
T Consensus 163 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 163 EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 89999999999999999999999999987654433332 288899999998
Q ss_pred CCEEEEeeCCCeEEEeeCCCc--------------EEEEEeeecccCeEEEEEccC--CcEEEEecCCceEEEEECCCCC
Q 021319 203 GRYFAVGSADSLVSLWDISEM--------------LCVRTFTKLEWPVRTISFSHT--GDYIASASEDLFIDISNVHTGR 266 (314)
Q Consensus 203 ~~~l~t~~~dg~i~vwd~~~~--------------~~~~~~~~~~~~v~~~~~sp~--~~~l~s~s~d~~v~v~~~~~~~ 266 (314)
++++++++.|+.|++||+.+. ..+..+..|..+|.+++|+|+ +++|++|+.|+.|++||+.+++
T Consensus 241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 779999999999999998765 347778888889999999999 9999999999999999999876
Q ss_pred eE----EEEec---cCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 267 TV----HQIPC---RAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 267 ~~----~~~~~---~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
.. ..+.. ...|++++|+|++++|++++.| |.++||+++
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~ 365 (366)
T 3k26_A 321 PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDD--------ASIWRWDRL 365 (366)
T ss_dssp GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETT--------SEEEEEEC-
T ss_pred CccccceEEcccccCCceEEEEeCCCCCeEEEEeCC--------CEEEEEEec
Confidence 43 34443 4789999999999999999977 689999986
No 29
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=282.36 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=221.6
Q ss_pred eeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEE
Q 021319 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~i 93 (314)
..+.||...|.+++|++++.+++|++.|++|++||+++.. ....+..|...+.+++|+|++ ++|++++.|+.|++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~----~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGK----QIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNI 148 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE----EEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEE
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCC----EEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEE
Confidence 4578999999999999999999999999999999987532 334567888899999999975 69999999999999
Q ss_pred EeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcCCc
Q 021319 94 WDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNG 171 (314)
Q Consensus 94 wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g 171 (314)
||+.+++........ ..+.+++|+|++++|++++.|+.|++||+++.+.+...+ +...+.+++|+|++..+++++.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTS
T ss_pred EEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCC
Confidence 999998877665544 346689999999999999999999999999998877764 456789999999999999999999
Q ss_pred eEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEe
Q 021319 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 251 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 251 (314)
.+++|+....+....+.+|...|.+++|+|++++|++++.|++|++||+.+++++.++.+|...|.+++|+|++++|+++
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 99999999888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEC
Q 021319 252 SEDLFIDISNV 262 (314)
Q Consensus 252 s~d~~v~v~~~ 262 (314)
+.|+.|++||.
T Consensus 309 ~~d~~i~vwd~ 319 (321)
T 3ow8_A 309 GDDQEIHIYDC 319 (321)
T ss_dssp ETTCCEEEEEC
T ss_pred eCCCeEEEEeC
Confidence 99999999996
No 30
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.8e-41 Score=292.03 Aligned_cols=286 Identities=15% Similarity=0.211 Sum_probs=240.6
Q ss_pred eeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
.+..|.++|++++|+|++++|++|+.|+.|++|+++... ......+.+|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK--WVQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE--EEEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc--EEeeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEEE
Confidence 356699999999999999999999999999999987531 1134467799999999999996 5799999999999999
Q ss_pred eCCCCceeeeEE---ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeE---eeee--ccCcceeeEEeccCCCeEEE
Q 021319 95 DARSGKCSQQAE---LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP---IHRR--KFGYEVNEIAWNMTGEMFFL 166 (314)
Q Consensus 95 d~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~ 166 (314)
|+.+++...... ....+.+++|+|++++|++++.|+.+.+||++..+. .... .+...+.+++|+|++..+++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 998887544432 345677899999999999999999999999987652 2222 23567999999999999999
Q ss_pred EcCCceEEEEeCC------------------CCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEE
Q 021319 167 TTGNGTVEVLTYP------------------SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (314)
Q Consensus 167 ~~~~g~~~~~~~~------------------~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~ 228 (314)
++.++.+++|+.. ..+.+..+..|...+.+++|+|++++|++++.||.|++||+++++++..
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEE
Confidence 9999999999953 4556667778999999999999999999999999999999999999999
Q ss_pred eeecccCeEEEEEccCCcEEEEecCCceEEEEECCC--CCe--------------------------------E------
Q 021319 229 FTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHT--GRT--------------------------------V------ 268 (314)
Q Consensus 229 ~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~--~~~--------------------------------~------ 268 (314)
+..+..++.+++|+|++++|+++ .|+.|++|++.+ ++. .
T Consensus 240 ~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (372)
T 1k8k_C 240 LASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG 318 (372)
T ss_dssp EECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------
T ss_pred EccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccc
Confidence 99999999999999999999988 999999999977 420 0
Q ss_pred EEE--eccCccceeEEc-CCC---CeeEEEecCCcccccccceEEecccc
Q 021319 269 HQI--PCRAAMNSVEWN-PKY---NLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 269 ~~~--~~~~~i~~v~~~-~~~---~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
..+ .|...|++++|+ +++ .+|++++.| |+++||+++
T Consensus 319 ~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~D--------g~i~~W~~~ 360 (372)
T 1k8k_C 319 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD--------GGMSIWDVR 360 (372)
T ss_dssp CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETT--------SEEEEEEHH
T ss_pred ccccccccCCcceeEEecCCCcceeeEEEecCC--------CceEEEEec
Confidence 111 356789999977 566 899999977 689999984
No 31
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=284.75 Aligned_cols=247 Identities=17% Similarity=0.199 Sum_probs=208.6
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~ 97 (314)
.|...|.+++|+|++ .|++|+.||+|+|||+++..........+.+|.+.|.+++|+|++ ++|++|+.|++|++||+.
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECC
Confidence 466789999999985 788999999999999987554334445567999999999999974 799999999999999999
Q ss_pred CCceeeeEEe-cCceEEEEEccCCC-EEEEEeCCCcEEEEEccCCeEeeeec---cCcceeeEEeccCC-CeEEEEcCCc
Q 021319 98 SGKCSQQAEL-SGENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTG-EMFFLTTGNG 171 (314)
Q Consensus 98 ~~~~~~~~~~-~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~g 171 (314)
++++...+.. ...+.+++|+|++. ++++++.|+.|++||+++.++..... ....+.+++|+|.+ .++++++.++
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 9988877654 45567899999885 78899999999999999888776643 33467889999865 5677889999
Q ss_pred eEEEEeCCCCCceeeeeecccceEEEEECCCC-CEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCc-EEE
Q 021319 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMG-RYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGD-YIA 249 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~ 249 (314)
.+++|+....+++..+.+|...|++++|+|++ ++||+|+.|++|++||+.+++++ .+.+|...|.+++|+|+++ +|+
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEE
Confidence 99999999999999999999999999999998 57999999999999999988765 4678999999999999986 577
Q ss_pred EecCCceEEEEECCCCCe
Q 021319 250 SASEDLFIDISNVHTGRT 267 (314)
Q Consensus 250 s~s~d~~v~v~~~~~~~~ 267 (314)
|+|.|+.|++|++.+...
T Consensus 317 s~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 317 TVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEETTSCEEEEECCC---
T ss_pred EEcCCCeEEEEECCCCCC
Confidence 999999999999977543
No 32
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=288.02 Aligned_cols=291 Identities=12% Similarity=0.177 Sum_probs=232.4
Q ss_pred ccceeeecccccEEEEEECCCCCEEE-EeeC---CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCC--CCEEEE
Q 021319 11 LHSREYTGHKKKVHSVAWNCTGTKLA-SGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH--ADLIAT 84 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~g~~l~-s~~~---D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~--~~~l~s 84 (314)
+..+.+.+|.+.|++++|+|++..++ +|+. |+.|+||+++... .......+|...|.+++|+|+. +.+|++
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD---LKLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS---EEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc---ccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 34455688999999999999997655 5555 9999999997532 2333344799999999999974 578999
Q ss_pred EeCCCcEEEEeCCCCc-eeeeEEe-cCceEEEE------EccCCCEEEEEeCCCcEEEEEccCCe-Eeeeecc-----Cc
Q 021319 85 ASGDKTVRLWDARSGK-CSQQAEL-SGENINIT------YKPDGTHIAVGNRDDELTILDVRKFK-PIHRRKF-----GY 150 (314)
Q Consensus 85 ~~~D~~v~iwd~~~~~-~~~~~~~-~~~~~~~~------~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~-----~~ 150 (314)
++.|+.|++||+.+++ ....... ...+.++. |+|+++.|++++.|+.+++||++..+ ++..... ..
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 9999999999999887 5554443 34455664 57899999999999999999998765 4444322 23
Q ss_pred ceeeEE----eccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECC---CCCEEEEeeCCCeEEEeeCCCc
Q 021319 151 EVNEIA----WNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDP---MGRYFAVGSADSLVSLWDISEM 223 (314)
Q Consensus 151 ~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~---~~~~l~t~~~dg~i~vwd~~~~ 223 (314)
.+.++. |++++..++++..++.+++|+....+.. ....|...+.+++|+| ++.++++++.||.|++||+++.
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR-WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE-EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee-eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 577777 7889999999999999999999877653 3467888999999999 9999999999999999999876
Q ss_pred EEEEEe-----eecccCeEEEEEccCCc-EEEEecCCceEEEEECCCCC-------------------eEEEEe-ccCcc
Q 021319 224 LCVRTF-----TKLEWPVRTISFSHTGD-YIASASEDLFIDISNVHTGR-------------------TVHQIP-CRAAM 277 (314)
Q Consensus 224 ~~~~~~-----~~~~~~v~~~~~sp~~~-~l~s~s~d~~v~v~~~~~~~-------------------~~~~~~-~~~~i 277 (314)
..+..+ ..|...|.+++|+|+++ +|++++.|+.|++||+.++. .+..+. +...|
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v 324 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPI 324 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCe
Confidence 544333 37889999999999998 89999999999999987643 333333 56789
Q ss_pred ceeEEcCCCCeeE-EEecCCcccccccceEEeccccC
Q 021319 278 NSVEWNPKYNLLA-YAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 278 ~~v~~~~~~~~la-~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
++++|+|++++|+ +++.| |.++||++++
T Consensus 325 ~~~~~s~~~~~l~~s~~~d--------~~i~iw~~~~ 353 (357)
T 3i2n_A 325 SSLDWSPDKRGLCVCSSFD--------QTVRVLIVTK 353 (357)
T ss_dssp EEEEECSSSTTEEEEEETT--------SEEEEEEECC
T ss_pred eEEEEcCCCCeEEEEecCC--------CcEEEEECCC
Confidence 9999999999998 78877 6899999864
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.6e-41 Score=280.33 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=196.5
Q ss_pred eeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCC-CCCEEEEEeCCCcEEE
Q 021319 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKTVRL 93 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~D~~v~i 93 (314)
.+.+|.+.|++++|+|+|++|+||+.|++|+||+++.... .....+.+|.++|.+++|+|. .+++|+||+.|++|++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~--~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB--CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc--EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 4679999999999999999999999999999999864321 123467899999999999764 3579999999999999
Q ss_pred EeCCCCcee--eeEE-ecCceEEEEEccC--CCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEEc
Q 021319 94 WDARSGKCS--QQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT 168 (314)
Q Consensus 94 wd~~~~~~~--~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (314)
||+.+++.. .... ....+.+++|+|+ +.+|++++.|+.+++||++......
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~------------------------ 137 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS------------------------ 137 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC------------------------
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee------------------------
Confidence 999877532 2222 2345667889987 7899999999999999986532100
Q ss_pred CCceEEEEeCCCCCceeeeeecccceEEEEECCC-------------CCEEEEeeCCCeEEEeeCCCcE----EEEEeee
Q 021319 169 GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPM-------------GRYFAVGSADSLVSLWDISEML----CVRTFTK 231 (314)
Q Consensus 169 ~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-------------~~~l~t~~~dg~i~vwd~~~~~----~~~~~~~ 231 (314)
...+.+|...+++++|+|+ +++||+|+.|++|++||+++.. ....+.+
T Consensus 138 ---------------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~ 202 (297)
T 2pm7_B 138 ---------------PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (297)
T ss_dssp ---------------CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred ---------------eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC
Confidence 1122345666677777765 5799999999999999997643 5677889
Q ss_pred cccCeEEEEEccCC---cEEEEecCCceEEEEECCCCC--eE-EEE---eccCccceeEEcCCCCeeEEEecCCcccccc
Q 021319 232 LEWPVRTISFSHTG---DYIASASEDLFIDISNVHTGR--TV-HQI---PCRAAMNSVEWNPKYNLLAYAGDDKNKYQAD 302 (314)
Q Consensus 232 ~~~~v~~~~~sp~~---~~l~s~s~d~~v~v~~~~~~~--~~-~~~---~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~ 302 (314)
|...|.+++|+|++ .+|||+|.|+.|++||+.++. .. ..+ .+...|.+++|+|++++||+++.|
T Consensus 203 H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D------- 275 (297)
T 2pm7_B 203 HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD------- 275 (297)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT-------
T ss_pred CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCC-------
Confidence 99999999999995 899999999999999987643 11 222 235679999999999999999987
Q ss_pred cceEEecccc
Q 021319 303 EGVFRIYGFE 312 (314)
Q Consensus 303 ~~~~~~~~~~ 312 (314)
|+++||+.+
T Consensus 276 -~~v~lw~~~ 284 (297)
T 2pm7_B 276 -NKVTLWKEN 284 (297)
T ss_dssp -SCEEEEEEC
T ss_pred -CcEEEEEEC
Confidence 578899764
No 34
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-40 Score=291.04 Aligned_cols=285 Identities=16% Similarity=0.188 Sum_probs=238.3
Q ss_pred ecccccEEEEEECCCCC-EEEEeeCCCcEEEeec----CCCCCCc--eeeEEeec----------CCCCEEEEEEcCCCC
Q 021319 17 TGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHI----EPHGHGK--VKDIELRG----------HADSVDQLCWDPKHA 79 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~-~l~s~~~D~~v~iw~~----~~~~~~~--~~~~~~~~----------h~~~v~~l~~~~~~~ 79 (314)
..|.+.|++++|+|+++ +|++|+.|+.|++|++ ....... .....+.. |...|.+++|+|+ +
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~ 120 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD-G 120 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT-S
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC-C
Confidence 34569999999999999 9999999999999999 6432100 01122222 6889999999997 4
Q ss_pred CEEEEEeCCCcEEEEeCCCCceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-----------
Q 021319 80 DLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK----------- 147 (314)
Q Consensus 80 ~~l~s~~~D~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------- 147 (314)
++|++++.|+.|++|| .++....... ....+.+++|+|+++.|++++.|+.+.+||+++.+.+....
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 7999999999999999 4555555544 34567789999999999999999999999998765443211
Q ss_pred ----------------------------------------------cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCC
Q 021319 148 ----------------------------------------------FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSL 181 (314)
Q Consensus 148 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 181 (314)
+...+.+++|+|+++.+++++.++.+++|+....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG 279 (425)
T ss_dssp ------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB
T ss_pred ccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 2235678999999999999999999999999988
Q ss_pred CceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEE
Q 021319 182 RPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 261 (314)
Q Consensus 182 ~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~ 261 (314)
+.+..+..|...+.+++|+|++ ++++++.|+.|++||+.+++.+..+..+..++.+++|+|++++|++++.|+.|++|+
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~ 358 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYD 358 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 8888888899999999999999 999999999999999999999999988999999999999999999999999999999
Q ss_pred CCCCC--------------------eEEEEecc--C-ccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 262 VHTGR--------------------TVHQIPCR--A-AMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 262 ~~~~~--------------------~~~~~~~~--~-~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+.+++ .+..+... . .|++++|+|++++|++++.| |.++||+++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~iw~~~ 424 (425)
T 1r5m_A 359 LKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL--------QEGSVVAIP 424 (425)
T ss_dssp CHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS--------SCCEEEECC
T ss_pred CCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC--------ceEEEEeec
Confidence 98877 66666543 4 89999999999999999977 578899986
No 35
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-41 Score=299.37 Aligned_cols=286 Identities=13% Similarity=0.168 Sum_probs=234.2
Q ss_pred ceee-ecccccEEEEEECC-CCCEEEEeeCCCcEEEeecCC---CCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeC
Q 021319 13 SREY-TGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEP---HGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG 87 (314)
Q Consensus 13 ~~~~-~gH~~~V~~v~~s~-~g~~l~s~~~D~~v~iw~~~~---~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 87 (314)
...+ .+|.+.|++++|+| ++++|+||+.|++|+|||+.. ... ...... .+|...|.+++|+|+ +++|++++.
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~-~~~~~~-~~h~~~v~~~~~~~~-~~~l~s~s~ 131 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEV-YSSSLT-YDCSSTVTQITMIPN-FDAFAVSSK 131 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCC-CSCSEE-EECSSCEEEEEECTT-SSEEEEEET
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcc-cceeee-ccCCCCEEEEEEeCC-CCEEEEEeC
Confidence 3455 78999999999999 999999999999999999865 211 111122 259999999999986 579999999
Q ss_pred CCcEEEEeCC---CCceeeeEE-------------ecCceEEEE--EccCCCEEEEEeCCCcEEEEEccCCeEeeeec--
Q 021319 88 DKTVRLWDAR---SGKCSQQAE-------------LSGENINIT--YKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-- 147 (314)
Q Consensus 88 D~~v~iwd~~---~~~~~~~~~-------------~~~~~~~~~--~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-- 147 (314)
|++|++||+. .++...... ......++. +++++..+++++.|+.|.+||+++.+.+....
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 9999999984 454433222 112233444 56889999999999999999999988877765
Q ss_pred -cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeee-ecccceEEEEEC----CCCCEEEEeeCCCeEEEeeCC
Q 021319 148 -FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAID----PMGRYFAVGSADSLVSLWDIS 221 (314)
Q Consensus 148 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~----~~~~~l~t~~~dg~i~vwd~~ 221 (314)
+...+.+++|+|++..+++++.+|.+++|++...+++..+. .|...|++++++ |++++|++|+.||.|++||++
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 45689999999999999999999999999999888777765 677889999665 568899999999999999999
Q ss_pred CcEEEEEeeec--------------------------ccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe---
Q 021319 222 EMLCVRTFTKL--------------------------EWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP--- 272 (314)
Q Consensus 222 ~~~~~~~~~~~--------------------------~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~--- 272 (314)
+++++..+..+ ...|.+++|+ ++++|++|+.|+.|++||+.+++.+..+.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 99988877643 3457888898 77999999999999999999887665554
Q ss_pred -----------------------------------ccCccceeEEcCC--CCeeEEEecCCcccccccceEEecc
Q 021319 273 -----------------------------------CRAAMNSVEWNPK--YNLLAYAGDDKNKYQADEGVFRIYG 310 (314)
Q Consensus 273 -----------------------------------~~~~i~~v~~~~~--~~~la~~~~d~~~~~~~~~~~~~~~ 310 (314)
|...|++++|+++ +.+|++++.| |+++||.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d--------G~I~iw~ 437 (437)
T 3gre_A 371 RFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS--------GLIGIFQ 437 (437)
T ss_dssp -CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETT--------SCEEEEC
T ss_pred ccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCC--------ceEEEeC
Confidence 5678999999998 7899999977 6899994
No 36
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-40 Score=291.81 Aligned_cols=246 Identities=22% Similarity=0.369 Sum_probs=220.1
Q ss_pred cceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
..+.+.+|.+.|++++|+|++++|++|+.|++|+|||+.... ....+.+|...|.+++|+|++ ++|++|+.|++|
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~----~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i 216 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTI 216 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC----EEECCCCCSSCEEEEEECSSS-SEEEEEETTSEE
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc----eeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeE
Confidence 346788999999999999999999999999999999986532 234578999999999999974 689999999999
Q ss_pred EEEeCCCCceeeeEEecC-ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee-ccCcceeeEEeccC---------
Q 021319 92 RLWDARSGKCSQQAELSG-ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMT--------- 160 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~--------- 160 (314)
++||++++.+...+..+. .+..+.++|++.++++++.|+.+++||+++.+..... .+...+.++.|+|+
T Consensus 217 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 296 (410)
T 1vyh_C 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA 296 (410)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGC
T ss_pred EEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhh
Confidence 999999998877765443 4567889999999999999999999999988766554 35567899999986
Q ss_pred -----------CCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 161 -----------GEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 161 -----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
+.++++++.++.+++|+....+.+..+.+|...|++++|+|++++|++|+.||.|++||+.+++++..+
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 668999999999999999988888889999999999999999999999999999999999999999999
Q ss_pred eecccCeEEEEEccCCcEEEEecCCceEEEEEC
Q 021319 230 TKLEWPVRTISFSHTGDYIASASEDLFIDISNV 262 (314)
Q Consensus 230 ~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~ 262 (314)
..|...|.+++|+|++.+|+|||.|+.|++|+.
T Consensus 377 ~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 377 NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 999999999999999999999999999999985
No 37
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-39 Score=273.13 Aligned_cols=280 Identities=19% Similarity=0.218 Sum_probs=233.7
Q ss_pred ccceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc
Q 021319 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~ 90 (314)
...+.+.+|.+.|++++| |++++|++|+.||.|++||++.. .....+..|...|.+++|+|+ +.++++++.|+.
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~ 82 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ----WLGTVVYTGQGFLNSVCYDSE-KELLLFGGKDTM 82 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS----EEEEEEEECSSCEEEEEEETT-TTEEEEEETTSC
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC----EEEEEeecCCccEEEEEECCC-CCEEEEecCCCe
Confidence 345678999999999999 99999999999999999999652 233457789999999999997 479999999999
Q ss_pred EEEEeCCCCc---eeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee-ccCcceeeEEecc-CCCeE
Q 021319 91 VRLWDARSGK---CSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNM-TGEMF 164 (314)
Q Consensus 91 v~iwd~~~~~---~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~ 164 (314)
|++|++.... ...... ....+.++.| +++.+++++.|+.+.+|| ..+..... .+...+..+.+.+ +++.+
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 9999987653 233332 3345566777 678999999999999999 44444443 3556788889888 89999
Q ss_pred EEEcCCceEEEEeCCCCCceeeeee-cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEcc
Q 021319 165 FLTTGNGTVEVLTYPSLRPLDTVVA-HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSH 243 (314)
Q Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp 243 (314)
++++.++.+++|+. .+....+.. |...+.+++|+|++. +++++.||.|++||+++++.+..+..|..+|.+++|+|
T Consensus 159 ~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 235 (313)
T 3odt_A 159 LTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP 235 (313)
T ss_dssp EEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec
Confidence 99999999999993 334455555 888999999999998 89999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCceEEEEECCCCCeEEEEec-cCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 244 TGDYIASASEDLFIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 244 ~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
++ .|++++.|+.|++||+.+++.+..+.. ...|++++|+|++. +++++.| |.++||++++
T Consensus 236 ~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d--------g~i~iw~~~~ 296 (313)
T 3odt_A 236 NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSD--------NLVRIFSQEK 296 (313)
T ss_dssp TS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETT--------SCEEEEESCG
T ss_pred CC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCC--------CcEEEEeCCC
Confidence 99 699999999999999999998888764 55899999999998 4568866 6788999854
No 38
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2e-39 Score=276.86 Aligned_cols=247 Identities=20% Similarity=0.291 Sum_probs=216.6
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
...+..|...|.+++|+|++++|++|+.|+.|++|++............+.+|...|.++.|+++ ..+++++.|++|+
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~l~s~s~d~~i~ 167 (340)
T 1got_B 90 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--NQIVTSSGDTTCA 167 (340)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET--TEEEEEETTSCEE
T ss_pred ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC--CcEEEEECCCcEE
Confidence 35567899999999999999999999999999999997644333344567899999999999876 3588999999999
Q ss_pred EEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcCC
Q 021319 93 LWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGN 170 (314)
Q Consensus 93 iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
+||+.++++...+.. ...+.+++|+|+++++++++.|+.+++||+++.+.+.... +...+.+++|+|++..+++++.+
T Consensus 168 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence 999999987766643 4567789999999999999999999999999887776654 55679999999999999999999
Q ss_pred ceEEEEeCCCCCceeeeee--cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEE
Q 021319 171 GTVEVLTYPSLRPLDTVVA--HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYI 248 (314)
Q Consensus 171 g~~~~~~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 248 (314)
+.+++|++...+.+..+.. +...+++++|+|++++|++|+.||.|++||+.+...+..+.+|..+|.+++|+|++.+|
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l 327 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAV 327 (340)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEE
Confidence 9999999987766555432 33479999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCceEEEEE
Q 021319 249 ASASEDLFIDISN 261 (314)
Q Consensus 249 ~s~s~d~~v~v~~ 261 (314)
||||.|+.|++||
T Consensus 328 ~s~s~D~~i~iWd 340 (340)
T 1got_B 328 ATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEcCCccEEecC
Confidence 9999999999996
No 39
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=291.06 Aligned_cols=277 Identities=14% Similarity=0.250 Sum_probs=221.4
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCC-------CceeeEEeecCC------------CCEEEEEEcCCC
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH-------GKVKDIELRGHA------------DSVDQLCWDPKH 78 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~-------~~~~~~~~~~h~------------~~v~~l~~~~~~ 78 (314)
.|.+.|++++|+|+|++|++|+.||.|+||++..... .......+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4789999999999999999999999999999975331 111244678998 889999999985
Q ss_pred C-CEEEEEeCCCcEEEEeCCCCceee---------------------------------------e--EEecCceEEEEE
Q 021319 79 A-DLIATASGDKTVRLWDARSGKCSQ---------------------------------------Q--AELSGENINITY 116 (314)
Q Consensus 79 ~-~~l~s~~~D~~v~iwd~~~~~~~~---------------------------------------~--~~~~~~~~~~~~ 116 (314)
. ..+++++.|++|++||+..+.... . ......+.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 3 588999999999999987643310 1 112345668999
Q ss_pred ccCCCEEEEEeCCCcEEEEEccCC-eEeee--------eccCcceeeEEeccCC-CeEEEEcCCceEEEEeCCCCCc---
Q 021319 117 KPDGTHIAVGNRDDELTILDVRKF-KPIHR--------RKFGYEVNEIAWNMTG-EMFFLTTGNGTVEVLTYPSLRP--- 183 (314)
Q Consensus 117 ~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~--- 183 (314)
+|++++|+++ .|+.|++||++.. +.+.. ..+...+.+++|+|++ ..+++++.+|.+++|+....+.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 7999999999843 33331 1345679999999998 9999999999999999987765
Q ss_pred -eeeeeeccc------------ceEEEEECCCCCEEEEeeCCCeEEEeeCCC-cEEEEEeeecccC--------------
Q 021319 184 -LDTVVAHTA------------GCYCIAIDPMGRYFAVGSADSLVSLWDISE-MLCVRTFTKLEWP-------------- 235 (314)
Q Consensus 184 -~~~~~~~~~------------~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~-~~~~~~~~~~~~~-------------- 235 (314)
+..+..|.. .+++++|+|++++|++++. +.|++||++. ++++..+..|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 566777765 8999999999999999998 9999999986 7777777776532
Q ss_pred -eEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEE---------------------------------eccCccceeE
Q 021319 236 -VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQI---------------------------------PCRAAMNSVE 281 (314)
Q Consensus 236 -v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~---------------------------------~~~~~i~~v~ 281 (314)
+..++|+|++++|++|+.|+.|++||+.+++.+... .....|..++
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 423 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTA 423 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEE
Confidence 234999999999999999999999999998776421 1124578899
Q ss_pred EcCCCCeeEEEecCC
Q 021319 282 WNPKYNLLAYAGDDK 296 (314)
Q Consensus 282 ~~~~~~~la~~~~d~ 296 (314)
|||++++||+++.+.
T Consensus 424 ~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 424 WHPKENIIAVATTNN 438 (447)
T ss_dssp ECSSSSEEEEECSSC
T ss_pred ECCCCCEEEEEecce
Confidence 999999999998763
No 40
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.8e-41 Score=282.41 Aligned_cols=264 Identities=22% Similarity=0.355 Sum_probs=190.7
Q ss_pred eeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCC-CCCEEEEEeCCCcEE
Q 021319 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKTVR 92 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~D~~v~ 92 (314)
..+.+|.+.|++++|+|+|++|+||+.|++|+|||+.... ......+.+|.++|.+++|+|. .+++|+||+.|++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~--~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG--QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE--EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC--cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 4567999999999999999999999999999999986531 1233468899999999999753 357899999999999
Q ss_pred EEeCCCCcee--eeEE-ecCceEEEEEccC--CCEEEEEeCCCcEEEEEccCCeEe---ee-eccCcceeeEEeccCCCe
Q 021319 93 LWDARSGKCS--QQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPI---HR-RKFGYEVNEIAWNMTGEM 163 (314)
Q Consensus 93 iwd~~~~~~~--~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~---~~-~~~~~~~~~~~~~~~~~~ 163 (314)
+||++++... .... ....+.+++|+|+ +.+|++++.|+.+++||++..... .. ..+...+.++.|+|+...
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 9999887532 2222 2345668999997 789999999999999998764211 11 012233445555554210
Q ss_pred EEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCc---EEEEEeeecccCeEEEE
Q 021319 164 FFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM---LCVRTFTKLEWPVRTIS 240 (314)
Q Consensus 164 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~---~~~~~~~~~~~~v~~~~ 240 (314)
+.+ .. +... ...+++++|++|+.|+.|++||++.. .++..+.+|...|.+++
T Consensus 165 -------~~~--~~------------~~~~----~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~ 219 (316)
T 3bg1_A 165 -------GSL--ID------------HPSG----QKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVA 219 (316)
T ss_dssp ---------------------------CCS----CCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEE
T ss_pred -------ccc--cc------------cccc----cCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEE
Confidence 000 00 0000 00113578999999999999999754 56778889999999999
Q ss_pred EccCC----cEEEEecCCceEEEEECCCC---C-eEEE-EeccCccceeEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 241 FSHTG----DYIASASEDLFIDISNVHTG---R-TVHQ-IPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 241 ~sp~~----~~l~s~s~d~~v~v~~~~~~---~-~~~~-~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
|+|++ ++|||++.|+.|++|++.+. + .... ..+...|.+++|+|++++||+++.| |+++||+.
T Consensus 220 ~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D--------~~v~lw~~ 291 (316)
T 3bg1_A 220 WAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGD--------NKVTLWKE 291 (316)
T ss_dssp CCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESS--------SCEEEEEE
T ss_pred ecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCC--------CeEEEEEE
Confidence 99987 89999999999999998762 1 1111 2356789999999999999999988 57888876
Q ss_pred c
Q 021319 312 E 312 (314)
Q Consensus 312 ~ 312 (314)
.
T Consensus 292 ~ 292 (316)
T 3bg1_A 292 S 292 (316)
T ss_dssp C
T ss_pred C
Confidence 3
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-41 Score=294.49 Aligned_cols=284 Identities=14% Similarity=0.184 Sum_probs=219.9
Q ss_pred eeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
.+..|.++|++++|+|++++|++|+.|+.|+||++.... ......+.+|...|.+++|+|++ ++|++++.|++|++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG--WKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE--EEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc--eEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEE
Confidence 345577899999999999999999999999999997531 12334577999999999999984 689999999999999
Q ss_pred eCCCCc---eee-eEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeE---eeeec--cCcceeeEEeccCCCeEE
Q 021319 95 DARSGK---CSQ-QAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP---IHRRK--FGYEVNEIAWNMTGEMFF 165 (314)
Q Consensus 95 d~~~~~---~~~-~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~ 165 (314)
|+.++. ... .......+.+++|+|++++|++++.|+.+++||++..+. ..... +...+.+++|+|++..++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 998876 222 223455677899999999999999999999999987753 33333 567899999999999999
Q ss_pred EEcCCceEEEEeCCC------------------CCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEE--
Q 021319 166 LTTGNGTVEVLTYPS------------------LRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC-- 225 (314)
Q Consensus 166 ~~~~~g~~~~~~~~~------------------~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~-- 225 (314)
+++.++.+++|++.. .+.+..+ .|...+++++|+|++++|++++.||.|++||+.++.+
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 999999999999742 2233444 7889999999999999999999999999999998766
Q ss_pred --EEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECC-CCCe--------------------------E--------
Q 021319 226 --VRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVH-TGRT--------------------------V-------- 268 (314)
Q Consensus 226 --~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~-~~~~--------------------------~-------- 268 (314)
+..+..|..+|.+++|+|++++|++++.|+.+ +|+.. ++.. .
T Consensus 242 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (377)
T 3dwl_C 242 RALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTAL 320 (377)
T ss_dssp EECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------
T ss_pred eeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccc
Confidence 67788899999999999999999999888776 66554 2200 0
Q ss_pred -EEE-----------------eccCccceeEEcCCCC----eeEEEecCCcccccccceEEeccc
Q 021319 269 -HQI-----------------PCRAAMNSVEWNPKYN----LLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 269 -~~~-----------------~~~~~i~~v~~~~~~~----~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
..+ .|...|+++++.+... .|+|+|.| |.+|||++
T Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~D--------g~i~iWdl 377 (377)
T 3dwl_C 321 RSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTD--------GRVVLWTL 377 (377)
T ss_dssp ----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETT--------SEEEEECC
T ss_pred cccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCC--------CcEEEecC
Confidence 000 1567899999776443 59999988 68999986
No 42
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.6e-39 Score=284.22 Aligned_cols=282 Identities=18% Similarity=0.245 Sum_probs=238.0
Q ss_pred ceeeeccccc-EEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 13 SREYTGHKKK-VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 13 ~~~~~gH~~~-V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
...+.+|... +.++.+ ++++|++|+.||+|++||+.+. .....+.+|.+.|.+++|+|++ ++++|+.|++|
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~----~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i 185 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK----KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTV 185 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC----cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCE
Confidence 3578899887 566666 5789999999999999998753 2345678999999999999864 89999999999
Q ss_pred EEEeCCCCceeeeEEe-cCceEEEEEc--cCCCEEEEEeCCCcEEEEEccCCeEeee----------------------e
Q 021319 92 RLWDARSGKCSQQAEL-SGENINITYK--PDGTHIAVGNRDDELTILDVRKFKPIHR----------------------R 146 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~----------------------~ 146 (314)
++||+.++++...... ...+.++++. ++++++++++.|+.+.+||++..+.... .
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 9999999988776653 4555667777 6889999999999999999987543211 1
Q ss_pred ccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEE
Q 021319 147 KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCV 226 (314)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~ 226 (314)
..+.......++++++.+++++.++.+++|+....+++..+.+|...+++++|+|+++++++|+.||.|++||+++++++
T Consensus 266 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 266 LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred ccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 11111222334678899999999999999999998888888899999999999999999999999999999999999999
Q ss_pred EEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceE
Q 021319 227 RTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVF 306 (314)
Q Consensus 227 ~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~ 306 (314)
.++..|..+|.+++|+ +++|++++.|+.|++||+.++.......+...+..++|+|++.+|++++ | |.+
T Consensus 346 ~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d--------g~i 414 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E--------NQF 414 (464)
T ss_dssp EEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T--------TEE
T ss_pred EEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C--------CeE
Confidence 9999999999999997 5899999999999999999998888887777899999999999999888 5 578
Q ss_pred EeccccC
Q 021319 307 RIYGFEN 313 (314)
Q Consensus 307 ~~~~~~~ 313 (314)
+||+++.
T Consensus 415 ~iwd~~~ 421 (464)
T 3v7d_B 415 NIYNLRS 421 (464)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999864
No 43
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=277.14 Aligned_cols=279 Identities=19% Similarity=0.241 Sum_probs=229.8
Q ss_pred ceeeecccccEEEEEECCC---CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCC
Q 021319 13 SREYTGHKKKVHSVAWNCT---GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~---g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~ 89 (314)
.+.+.+|.+.|++++|+|+ |++|++|+.||.|+||+++... ......+.+|...|.+++|+|+ +++|++++.|+
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg 108 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG--QTIPKAQQMHTGPVLDVCWSDD-GSKVFTASCDK 108 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS--CEEEEEEEECSSCEEEEEECTT-SSEEEEEETTS
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC--ceeEEEeccccCCEEEEEECcC-CCEEEEEcCCC
Confidence 3457899999999999999 6999999999999999997522 2333567899999999999996 46899999999
Q ss_pred cEEEEeCCCCceeeeEEecCceEEEEE--ccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEE
Q 021319 90 TVRLWDARSGKCSQQAELSGENINITY--KPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT 167 (314)
Q Consensus 90 ~v~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
.|++||+.+++..........+.+++| +|++++|++++.|+.+++||+++.+++........+.++.+. ...++++
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 186 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI--YPMAVVA 186 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE--TTEEEEE
T ss_pred cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec--CCeeEEE
Confidence 999999999988777677777888999 899999999999999999999988877776665555555444 5688889
Q ss_pred cCCceEEEEeCCCCCceeee--eecccceEEEEECCCCCE----EEEeeCCCeEEEeeCCCc---EEEEEeeeccc----
Q 021319 168 TGNGTVEVLTYPSLRPLDTV--VAHTAGCYCIAIDPMGRY----FAVGSADSLVSLWDISEM---LCVRTFTKLEW---- 234 (314)
Q Consensus 168 ~~~g~~~~~~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~----l~t~~~dg~i~vwd~~~~---~~~~~~~~~~~---- 234 (314)
..++.+.+|+.......... ..+.....++++.++... +++++.||.|++||++.. ..+..+..|..
T Consensus 187 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 266 (368)
T 3mmy_A 187 TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTN 266 (368)
T ss_dssp EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---
T ss_pred eCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccc
Confidence 99999999998765432221 123344556666554443 999999999999999876 44556666654
Q ss_pred --------CeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCC
Q 021319 235 --------PVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDK 296 (314)
Q Consensus 235 --------~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~ 296 (314)
+|.+++|+|++++|++++.|+.|++||+.+++.+..+. +...|++++|+|++.+||+++.|.
T Consensus 267 ~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 267 TSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp -CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred ccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 79999999999999999999999999999999888876 467899999999999999999875
No 44
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=278.31 Aligned_cols=294 Identities=14% Similarity=0.172 Sum_probs=238.6
Q ss_pred cceeeecccccEEEEEECC-CCCEEEEeeCCCcEEEeecCCCCCCceeeEE---------eecCCCCEEEEEEcCCCCCE
Q 021319 12 HSREYTGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKDIE---------LRGHADSVDQLCWDPKHADL 81 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~-~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~---------~~~h~~~v~~l~~~~~~~~~ 81 (314)
..+.+.+|.+.|++++|+| ++++|++|+.||.|++|+++........... ..+|...|.+++|+|.++.+
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 3456788999999999999 9999999999999999999764432221110 12599999999999966789
Q ss_pred EEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccC---CCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEe
Q 021319 82 IATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD---GTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAW 157 (314)
Q Consensus 82 l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~ 157 (314)
+++++.|+.|++||+.+++.............+.+.+. +.++++++.++.+.+||+++.+.+.... +...+.+++|
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence 99999999999999999998888877777888888874 4599999999999999999887776654 5677999999
Q ss_pred ccCCC-eEEEEcCCceEEEEeCCCCC-ceeee---------------eecccceEEEEECCCCCEEEEeeCCCeEEEeeC
Q 021319 158 NMTGE-MFFLTTGNGTVEVLTYPSLR-PLDTV---------------VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (314)
Q Consensus 158 ~~~~~-~~~~~~~~g~~~~~~~~~~~-~~~~~---------------~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~ 220 (314)
+|++. .+++++.+|.+++|+..... ++..+ ..|...+++++|+|++++|++++.||.|++||+
T Consensus 195 ~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (408)
T 4a11_B 195 SPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNS 274 (408)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEEC
Confidence 99998 48899999999999986544 22222 568889999999999999999999999999999
Q ss_pred CCcEEEEEeeec-----ccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEec
Q 021319 221 SEMLCVRTFTKL-----EWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGD 294 (314)
Q Consensus 221 ~~~~~~~~~~~~-----~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~ 294 (314)
.++.....+..+ ...+........+..+++++.|+.|++||+.+++.+..+. +...|++++|+|++++|++++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 354 (408)
T 4a11_B 275 SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSR 354 (408)
T ss_dssp TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred CCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECC
Confidence 887654433221 1122222233445677778889999999999999998886 5678999999999999999998
Q ss_pred CCcccccccceEEeccccC
Q 021319 295 DKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 295 d~~~~~~~~~~~~~~~~~~ 313 (314)
| |.++||+++.
T Consensus 355 d--------g~i~iw~~~~ 365 (408)
T 4a11_B 355 D--------CNILAWVPSL 365 (408)
T ss_dssp T--------SCEEEEEECC
T ss_pred C--------CeEEEEeCCC
Confidence 7 5788998853
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-39 Score=278.88 Aligned_cols=247 Identities=17% Similarity=0.177 Sum_probs=204.9
Q ss_pred eecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q 021319 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (314)
Q Consensus 16 ~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd 95 (314)
..+|...|.+++|+|++. +++++.||+|+|||+.+............+|...|.+++|+|++ ++|++|+.|++|++||
T Consensus 90 ~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEE
T ss_pred cCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEE
Confidence 457899999999999985 55678899999999976543333344566899999999999974 6899999999999999
Q ss_pred CCCCceeeeEEe-cCceEEEEEccCCC-EEEEEeCCCcEEEEEccCCeEeeeec---cCcceeeEEeccCC-CeEEEEcC
Q 021319 96 ARSGKCSQQAEL-SGENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTG-EMFFLTTG 169 (314)
Q Consensus 96 ~~~~~~~~~~~~-~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~ 169 (314)
++++++...+.. ...+.+++|+|++. .+++++.|+.|++||+++.++..... ....+.+++|+|++ .++++++.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 999988777654 44566799999875 78899999999999999887665443 34568899999975 56778899
Q ss_pred CceEEEEeCCCCCceeeeeecccceEEEEECCCC-CEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEcc-CCcE
Q 021319 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMG-RYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSH-TGDY 247 (314)
Q Consensus 170 ~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp-~~~~ 247 (314)
++.+++|+....+.+..+.+|...|++++|+|++ ++||+|+.|++|++||++++++++.+ +|...|.+++|+| ++.+
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~ 326 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSK 326 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTE
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCE
Confidence 9999999999988888899999999999999987 57999999999999999999887665 7889999999999 7999
Q ss_pred EEEecCCceEEEEECCCC
Q 021319 248 IASASEDLFIDISNVHTG 265 (314)
Q Consensus 248 l~s~s~d~~v~v~~~~~~ 265 (314)
|+|+|.|+.|++|++.+.
T Consensus 327 l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 327 FTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEEETTSCEEEEECC--
T ss_pred EEEEcCCCeEEEEECCCC
Confidence 999999999999998753
No 46
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.8e-39 Score=270.27 Aligned_cols=244 Identities=18% Similarity=0.259 Sum_probs=212.5
Q ss_pred EEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 021319 60 IELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVR 138 (314)
Q Consensus 60 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 138 (314)
..+.+|.+.|.+++|+|++ .+|++++.|++|++||+.++.....+..+ .....+.|+|++++|++++.|+.|++||++
T Consensus 7 ~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred EeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 3578999999999999985 69999999999999999999877766544 445678999999999999999999999999
Q ss_pred CCeEeeeec-cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCC-ceeeeeecccceEEEEECC-CCCEEEEeeCCCeE
Q 021319 139 KFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLR-PLDTVVAHTAGCYCIAIDP-MGRYFAVGSADSLV 215 (314)
Q Consensus 139 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~i~~i~~~~-~~~~l~t~~~dg~i 215 (314)
+.+.+...+ +...+.+++|+|+++.+++++.|+.+++|++.... ....+.+|...|++++|+| ++.+|++|+.|+.|
T Consensus 86 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 888776654 56679999999999999999999999999987653 4456778999999999999 67899999999999
Q ss_pred EEeeCCCcEEEEEee-ecccCeEEEEEcc--CCcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEE
Q 021319 216 SLWDISEMLCVRTFT-KLEWPVRTISFSH--TGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAY 291 (314)
Q Consensus 216 ~vwd~~~~~~~~~~~-~~~~~v~~~~~sp--~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~ 291 (314)
++||+.+......+. .+...+..++|+| ++++|++|+.|+.|++||+.+++.+..+. |...|++++|+|++++|++
T Consensus 166 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp EEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred EEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEE
Confidence 999998765544443 4557899999986 77899999999999999999999888876 5678999999999999999
Q ss_pred EecCCcccccccceEEecccc
Q 021319 292 AGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 292 ~~~d~~~~~~~~~~~~~~~~~ 312 (314)
++.| |++|||+++
T Consensus 246 ~s~D--------g~i~iWd~~ 258 (304)
T 2ynn_A 246 GSED--------GTLKIWNSS 258 (304)
T ss_dssp EETT--------SCEEEEETT
T ss_pred EcCC--------CeEEEEECC
Confidence 9988 578899875
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-40 Score=297.86 Aligned_cols=285 Identities=12% Similarity=0.137 Sum_probs=219.7
Q ss_pred ccccEEEEEECCCC---------CEEEE-------------------eeCCCcEEEeecCCCCCCceeeEEeecCCCCEE
Q 021319 19 HKKKVHSVAWNCTG---------TKLAS-------------------GSVDQTARVWHIEPHGHGKVKDIELRGHADSVD 70 (314)
Q Consensus 19 H~~~V~~v~~s~~g---------~~l~s-------------------~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~ 70 (314)
+.+.|.+|+|+|++ ++||+ ++.|++|+||+++...........+.+|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 57789999999886 55555 567899999999764322222234667889999
Q ss_pred EEEEcCC-----CCCEEEEEeCCCcEEEEeCCCCcee-----------eeEE-ecCceEEEEEccCCCEEEEEeCCCcEE
Q 021319 71 QLCWDPK-----HADLIATASGDKTVRLWDARSGKCS-----------QQAE-LSGENINITYKPDGTHIAVGNRDDELT 133 (314)
Q Consensus 71 ~l~~~~~-----~~~~l~s~~~D~~v~iwd~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~ 133 (314)
+++|+|. .+.+|++++.|++|++||+..+.+. ..+. ....+.+++|+++ ..|++|+.|++|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999996 2469999999999999999876432 1111 2345678999886 4899999999999
Q ss_pred EEEccCCe-Eeee-eccCcceeeE--EeccCC-CeEEEEcCCceEEEEeCCCCCceeeeeeccc--ceEEEEECCCCCEE
Q 021319 134 ILDVRKFK-PIHR-RKFGYEVNEI--AWNMTG-EMFFLTTGNGTVEVLTYPSLRPLDTVVAHTA--GCYCIAIDPMGRYF 206 (314)
Q Consensus 134 i~d~~~~~-~~~~-~~~~~~~~~~--~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~i~~i~~~~~~~~l 206 (314)
+||+++.. +... ..+...+.++ .|++++ ..+++++.|+++++|++...+....+.+|.. .+.+++|+|+++.+
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 99998653 3322 2355678888 577887 8899999999999999987776666667753 47899999999999
Q ss_pred EEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCC-----C---------eEEE--
Q 021319 207 AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTG-----R---------TVHQ-- 270 (314)
Q Consensus 207 ~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~-----~---------~~~~-- 270 (314)
++++.|++|++||++++.++.++.+|...|.+|+|+|++++|+||+.|+.|++||+... + .+..
T Consensus 371 ~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~ 450 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWD 450 (524)
T ss_dssp EEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECB
T ss_pred EEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEec
Confidence 99999999999999998888888899999999999999999999999999999985321 0 0100
Q ss_pred ----------------------------E-eccCccceeEEcCCCC---eeEEEecCCcccccccceEEecccc
Q 021319 271 ----------------------------I-PCRAAMNSVEWNPKYN---LLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 271 ----------------------------~-~~~~~i~~v~~~~~~~---~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+ .+...|++|+|||+++ .||+|+.| |++|||.|+
T Consensus 451 ~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~--------g~vrlw~l~ 516 (524)
T 2j04_B 451 YSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSA--------GLLTLEYLS 516 (524)
T ss_dssp CCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTT--------SEEEEEECS
T ss_pred cCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccC--------ceEEEEEcc
Confidence 0 1245689999999965 88998866 799999985
No 48
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.6e-39 Score=276.87 Aligned_cols=275 Identities=15% Similarity=0.105 Sum_probs=235.0
Q ss_pred eecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCC-EEEEEeCCCcEEEE
Q 021319 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHAD-LIATASGDKTVRLW 94 (314)
Q Consensus 16 ~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~l~s~~~D~~v~iw 94 (314)
..+|.+.|++++|+|++++|++++.|+.|++|+++.... ......+.+|...|.+++|+|+ ++ +|++++.|+.|++|
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK-NVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILKV 84 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT-EEEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc-cccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEEEE
Confidence 358999999999999999999999999999999976431 1223345689999999999997 57 89999999999999
Q ss_pred eC-CCCceeeeEE--ecCceEEEEEccCCCEEEEEeCCCcEEEEEccC---------CeEeeeeccCcceeeEEeccCCC
Q 021319 95 DA-RSGKCSQQAE--LSGENINITYKPDGTHIAVGNRDDELTILDVRK---------FKPIHRRKFGYEVNEIAWNMTGE 162 (314)
Q Consensus 95 d~-~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 162 (314)
|+ .+++...... ....+.+++|+| ++.+++++.|+.|.+||++. .+++....+...+.+++|++++
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR- 162 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-
T ss_pred EeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-
Confidence 99 8877644434 556677899999 99999999999999999987 6666666677789999999877
Q ss_pred eEEEEcCCceEEEEeCCC-CCc--eeeeeecccceEEEEECC-CCCEEEEeeCCCeEEEeeCCCc------EEEEEeeec
Q 021319 163 MFFLTTGNGTVEVLTYPS-LRP--LDTVVAHTAGCYCIAIDP-MGRYFAVGSADSLVSLWDISEM------LCVRTFTKL 232 (314)
Q Consensus 163 ~~~~~~~~g~~~~~~~~~-~~~--~~~~~~~~~~i~~i~~~~-~~~~l~t~~~dg~i~vwd~~~~------~~~~~~~~~ 232 (314)
+++++.++.+++|++.. ... ......|...+.+++|+| +++++++++.||.|++||++.. ..+..+..|
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 88899999999999977 442 223446788899999999 9999999999999999999766 666777777
Q ss_pred cc---------CeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe-c-cCccceeEEcCCCCeeEEEecCCc
Q 021319 233 EW---------PVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP-C-RAAMNSVEWNPKYNLLAYAGDDKN 297 (314)
Q Consensus 233 ~~---------~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~-~~~i~~v~~~~~~~~la~~~~d~~ 297 (314)
.. +|.+++|+|++++|++++.|+.|++||+.+++.+..+. + ...|++++ |++.+|++++.|+.
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 54 89999999999999999999999999999999888876 3 67899999 99999999999976
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.4e-39 Score=279.84 Aligned_cols=282 Identities=13% Similarity=0.228 Sum_probs=230.1
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA 96 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~ 96 (314)
.+| ..+....|+|++++|++|+.|+.|++|+++.. .....+.+|...|.+++|+|++ .+|++++.|++|++||+
T Consensus 95 ~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 95 KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN----LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSV 168 (420)
T ss_dssp CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC----EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEET
T ss_pred ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc----ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeC
Confidence 344 45566678999999999999999999998742 2333457899999999999974 69999999999999999
Q ss_pred CCCceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeecc-------------------------Cc
Q 021319 97 RSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-------------------------GY 150 (314)
Q Consensus 97 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------------------~~ 150 (314)
.+++....+. ....+.+++|+|+++.|++++.|+.+++||+++.+.+..... ..
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 9988776665 345667899999999999999999999999998887766542 13
Q ss_pred ceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeee-ecccceEEEEECCCCC-EEEEeeCCCeEEEeeCCCcEE-EE
Q 021319 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISEMLC-VR 227 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~-~l~t~~~dg~i~vwd~~~~~~-~~ 227 (314)
.+..++|+|+++.+++++.+|.+++|+....+....+. .|...+++++|+|+++ +|++|+.||.|++||++++.. +.
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVG 328 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchh
Confidence 44556778899999999999999999998877665554 5788999999999999 999999999999999987643 56
Q ss_pred Eeee-cccCeEEEEEccCCcEEEEecCCceEEEEECCCCCe----------EEEEeccCccceeEEcCCCC---eeEEEe
Q 021319 228 TFTK-LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT----------VHQIPCRAAMNSVEWNPKYN---LLAYAG 293 (314)
Q Consensus 228 ~~~~-~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~----------~~~~~~~~~i~~v~~~~~~~---~la~~~ 293 (314)
.+.. +..++.++. .|++++|++++.|+.|++|++..... .....+...|.+++|+|++. .|+++|
T Consensus 329 ~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 329 EFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp EEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred hhhccCCCCceEEE-eCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 6666 566788884 56889999999999999999876322 12223466899999999998 565666
Q ss_pred cCCcccccccceEEeccccC
Q 021319 294 DDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 294 ~d~~~~~~~~~~~~~~~~~~ 313 (314)
.+ |.+++|++++
T Consensus 408 ~~--------g~~~~~~~~~ 419 (420)
T 3vl1_A 408 KN--------NFCALYNLSN 419 (420)
T ss_dssp TT--------TEEEEEESCC
T ss_pred CC--------ceEEEEeccC
Confidence 44 6899999986
No 50
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-40 Score=289.18 Aligned_cols=284 Identities=16% Similarity=0.264 Sum_probs=237.5
Q ss_pred ccccEEEEEECCCCC-EEEEe----------eCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeC
Q 021319 19 HKKKVHSVAWNCTGT-KLASG----------SVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG 87 (314)
Q Consensus 19 H~~~V~~v~~s~~g~-~l~s~----------~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 87 (314)
+...|.+++|+|+++ +|++| +.|+.|+||++...... .......|...|.+++|+|++ .+|++++.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~ 87 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--KPIASLQVDSKFNDLDWSHNN-KIIAGALD 87 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC--SCSCCCCCSSCEEEEEECSSS-SCEEEEES
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC--cEEEEEecCCceEEEEECCCC-CeEEEEcc
Confidence 456789999999997 89999 89999999999753211 112234689999999999975 68899999
Q ss_pred CCcEEEEeCCC----CceeeeEE-ecCceEEEEEccC-CCEEEEEeCCCcEEEEEccCCe------Eeee----eccCcc
Q 021319 88 DKTVRLWDARS----GKCSQQAE-LSGENINITYKPD-GTHIAVGNRDDELTILDVRKFK------PIHR----RKFGYE 151 (314)
Q Consensus 88 D~~v~iwd~~~----~~~~~~~~-~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~------~~~~----~~~~~~ 151 (314)
|+.|++||+.. .+...... ....+.+++|+|+ +++|++++.|+.|.+||+++.+ .... ..+...
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 99999999987 23433333 3455678999998 8999999999999999998765 2222 234567
Q ss_pred eeeEEeccC-CCeEEEEcCCceEEEEeCCCCCceeeeeec------ccceEEEEECCCC-CEEEEeeCCC---eEEEeeC
Q 021319 152 VNEIAWNMT-GEMFFLTTGNGTVEVLTYPSLRPLDTVVAH------TAGCYCIAIDPMG-RYFAVGSADS---LVSLWDI 220 (314)
Q Consensus 152 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~i~~i~~~~~~-~~l~t~~~dg---~i~vwd~ 220 (314)
+.+++|+|+ +..+++++.++.+++|+....+.+..+..+ ...+++++|+|++ .++++++.|+ .|++||+
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence 899999999 788999999999999999888777777665 7789999999997 6899999998 9999999
Q ss_pred CCc-EEEEEee-ecccCeEEEEEcc-CCcEEEEecCCceEEEEECCCCCeEEEEe-ccCccceeEEcCCC-CeeEEEecC
Q 021319 221 SEM-LCVRTFT-KLEWPVRTISFSH-TGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKY-NLLAYAGDD 295 (314)
Q Consensus 221 ~~~-~~~~~~~-~~~~~v~~~~~sp-~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~-~~la~~~~d 295 (314)
++. ..+..+. .|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+. +...|++++|+|++ .+|++++.|
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 876 5666777 7889999999999 99999999999999999999999988876 46789999999998 899999977
Q ss_pred CcccccccceEEeccccC
Q 021319 296 KNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~ 313 (314)
|.++||+++.
T Consensus 328 --------~~i~iw~~~~ 337 (416)
T 2pm9_A 328 --------NKIEVQTLQN 337 (416)
T ss_dssp --------SEEEEEESCC
T ss_pred --------CcEEEEEccC
Confidence 6899999854
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9e-39 Score=271.30 Aligned_cols=280 Identities=16% Similarity=0.210 Sum_probs=237.1
Q ss_pred ccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 021319 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (314)
Q Consensus 19 H~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~ 98 (314)
|.++|.+++|+|||+.++++..++.+.+|.... ........+|...|.+++|+|++ .++++++ |+.|++||+.+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~ 81 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPR----HARQINTLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISH 81 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCS----EEEEEEEECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCC----ccccceeccCCCceEEEEEecCC-cEEEEcC-CCeEEEEECCC
Confidence 567899999999999999998888777775432 22334556899999999999974 6888888 99999999987
Q ss_pred CceeeeE------EecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeE--eeee-ccCcceeeEEeccCCCeEEEEcC
Q 021319 99 GKCSQQA------ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP--IHRR-KFGYEVNEIAWNMTGEMFFLTTG 169 (314)
Q Consensus 99 ~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
+...... .....+.+++|+|+++.+++++.|+.+.+||++..+. .... .+...+.++.|+|+++.+++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 161 (337)
T 1gxr_A 82 PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS 161 (337)
T ss_dssp TTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred CCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC
Confidence 6533222 2345567899999999999999999999999988763 2222 34566899999999999999999
Q ss_pred CceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEE
Q 021319 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIA 249 (314)
Q Consensus 170 ~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 249 (314)
++.+.+|+....+.+..+..|...+.+++|+|+++++++++.||.|++||+++++.+..+ .+..++.+++|+|++++|+
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLA 240 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEE
T ss_pred CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEE
Confidence 999999999988888888889999999999999999999999999999999999887776 4677899999999999999
Q ss_pred EecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 250 SASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 250 s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+++.|+.+++||..+++......+...|.+++|+|++++|++++.| |.++||+++.
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~~~~~~ 296 (337)
T 1gxr_A 241 VGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD--------NLLNAWRTPY 296 (337)
T ss_dssp EEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred EEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCC--------CcEEEEECCC
Confidence 9999999999999998876555667889999999999999999977 6788998753
No 52
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9.3e-39 Score=271.82 Aligned_cols=259 Identities=19% Similarity=0.253 Sum_probs=216.1
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCC-CCCEEEEEeCCCcE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKTV 91 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~D~~v 91 (314)
.+.+.+|.+.|++++|+|++++|++|+.||.|++|++............+.+|...|.+++|+|. ++++|++++.|++|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 45678999999999999999999999999999999997644333344567899999999999985 35799999999999
Q ss_pred EEEeCCCCc---------eeeeEE-ecCceEEEEEccC--CCEEEEEeCCCcEEEEEccCCeEeeee-------------
Q 021319 92 RLWDARSGK---------CSQQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPIHRR------------- 146 (314)
Q Consensus 92 ~iwd~~~~~---------~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~------------- 146 (314)
++||++.+. ...... ....+..++|+|+ +.++++++.|+.+++||+++.+.+...
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 999998763 233332 3455678999999 999999999999999999876543221
Q ss_pred -ccCcceeeEEeccC---CCeEEEEcCCceEEEEeCCCCCc--eeeeeecccceEEEEECCCC----CEEEEeeCCCeEE
Q 021319 147 -KFGYEVNEIAWNMT---GEMFFLTTGNGTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMG----RYFAVGSADSLVS 216 (314)
Q Consensus 147 -~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~----~~l~t~~~dg~i~ 216 (314)
.....+.++.|+|. +..++++..++.+.++.....+. +..+.+|...|++++|+|++ ++|++++.||.|+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 23346788999997 89999999999997777665543 56677899999999999998 8999999999999
Q ss_pred EeeCCCc----------------------------------------------EEEEEeeecccCeEEEEEccCCcEEEE
Q 021319 217 LWDISEM----------------------------------------------LCVRTFTKLEWPVRTISFSHTGDYIAS 250 (314)
Q Consensus 217 vwd~~~~----------------------------------------------~~~~~~~~~~~~v~~~~~sp~~~~l~s 250 (314)
+||++.. ..+..+.+|..+|.+++|+|++++|++
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 323 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS 323 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEE
Confidence 9999764 566777788899999999999999999
Q ss_pred ecCCceEEEEECCCCCeEEEE
Q 021319 251 ASEDLFIDISNVHTGRTVHQI 271 (314)
Q Consensus 251 ~s~d~~v~v~~~~~~~~~~~~ 271 (314)
++.|+.|++|++.+++.+..+
T Consensus 324 ~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 324 AGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EETTSCEEEEEECTTSCEEEE
T ss_pred ecCCCcEEEEecCcCcchhhe
Confidence 999999999999988766554
No 53
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.5e-38 Score=296.28 Aligned_cols=280 Identities=18% Similarity=0.174 Sum_probs=243.4
Q ss_pred ccceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc
Q 021319 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~ 90 (314)
...+.+.+|.+.|++++|+|++++|++|+.||.|+|||+.++ .....+.+|..+|.+++|+|++ ++|++++.|+.
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~----~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~ 78 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ----VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFR 78 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC----ceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCe
Confidence 345778999999999999999999999999999999998753 2334677899999999999974 68999999999
Q ss_pred EEEEeCCCCceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCC-eEeeee-ccCcceeeEEecc-CCCeEEE
Q 021319 91 VRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKF-KPIHRR-KFGYEVNEIAWNM-TGEMFFL 166 (314)
Q Consensus 91 v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~-~~~~~~~~~~~~~-~~~~~~~ 166 (314)
|++||+.+++...... ....+.+++|+|++++|++++.|+.+.+||+... ...... .+...+.+++|+| ++..+++
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence 9999999998877765 3455678999999999999999999999999876 443333 3556799999999 7889999
Q ss_pred EcCCceEEEEeCCCCCceeeeeecc-cceEEEEECC--CCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEcc
Q 021319 167 TTGNGTVEVLTYPSLRPLDTVVAHT-AGCYCIAIDP--MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSH 243 (314)
Q Consensus 167 ~~~~g~~~~~~~~~~~~~~~~~~~~-~~i~~i~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp 243 (314)
++.+|.+.+|+....++...+..+. ..+.+++|+| +++++++++.||.|++||+.++.++..+..|..+|.+++|+|
T Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 238 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (814)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 9999999999998777766665544 7899999999 999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCceEEEEECCCCCeEEEEec-cCccceeEEcCCCC--eeEEEecC
Q 021319 244 TGDYIASASEDLFIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYN--LLAYAGDD 295 (314)
Q Consensus 244 ~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~-~~~i~~v~~~~~~~--~la~~~~d 295 (314)
++++|++++.|+.|++||..+++.+..+.. ...+.+++|+|++. ++++++++
T Consensus 239 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 293 (814)
T 3mkq_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN 293 (814)
T ss_dssp SSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCC
Confidence 999999999999999999999998888764 56899999999986 35555533
No 54
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.8e-38 Score=274.13 Aligned_cols=239 Identities=23% Similarity=0.340 Sum_probs=209.8
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~ 100 (314)
..|++++|+|+|++|++|+.|++|+|||++.. .....+.+|...|.+++|+|++ +.|++++.|++|++||+++++
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENR----KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCC----cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCe
Confidence 35999999999999999999999999998753 2344678999999999999975 689999999999999999998
Q ss_pred eeeeEEecCceEEEEEcc-CCCEEEEEeCCCcEEEEEccCCeEeeee--------ccCcceeeEEeccCCCeEEEEcCCc
Q 021319 101 CSQQAELSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRR--------KFGYEVNEIAWNMTGEMFFLTTGNG 171 (314)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~g 171 (314)
+............++++| +++++++++.|+.+++||+++.+.+... .+...+.+++|+|++..+++++.++
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 887777777788899999 8999999999999999999887766543 2345789999999999999999999
Q ss_pred eEEEEeCCCC------------CceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEE
Q 021319 172 TVEVLTYPSL------------RPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 239 (314)
Q Consensus 172 ~~~~~~~~~~------------~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~ 239 (314)
.+++|++... .....+.+|...+.+++++|++++|++|+.|+.|++||+.++.++..+.+|...|.++
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISV 358 (393)
T ss_dssp EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEE
Confidence 9999998642 2234567899999999999999999999999999999999999999999999999999
Q ss_pred EEcc------CCcEEEEecCCceEEEEECCC
Q 021319 240 SFSH------TGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 240 ~~sp------~~~~l~s~s~d~~v~v~~~~~ 264 (314)
+|+| ++.+|||||.|+.|++|++.+
T Consensus 359 ~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 359 AVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 9886 689999999999999999754
No 55
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.2e-37 Score=261.93 Aligned_cols=244 Identities=20% Similarity=0.257 Sum_probs=212.4
Q ss_pred eEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc-----eeeeEEe-cCceEEEEEccCCCEEEEEeCCCcE
Q 021319 59 DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK-----CSQQAEL-SGENINITYKPDGTHIAVGNRDDEL 132 (314)
Q Consensus 59 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i 132 (314)
...+.+|.+.|.+++|+|.++++|+||+.|++|++||+.... ....+.. ...+..++|+|++++|++++.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 346889999999999999877899999999999999986432 2223332 3455679999999999999999999
Q ss_pred EEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCC------CCE
Q 021319 133 TILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPM------GRY 205 (314)
Q Consensus 133 ~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~------~~~ 205 (314)
++||+++.+.+.... +...+.+++|++++..+++++.|+.+++|+... +.+..+.+|...+.+++++|. +..
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 999999988876653 567899999999999999999999999999864 456677889999999999985 448
Q ss_pred EEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCC
Q 021319 206 FAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPK 285 (314)
Q Consensus 206 l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~ 285 (314)
+++++.|+.|++||+++.+....+.+|..+|.+++|+|++++|++|+.|+.|++||+.+++.+..+.....|.+++|+|+
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 248 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPN 248 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSS
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888889999999999
Q ss_pred CCeeEEEecCCcccccccceEEecccc
Q 021319 286 YNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 286 ~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+.+|++++.+ .++||+++
T Consensus 249 ~~~la~~~~~---------~i~v~~~~ 266 (319)
T 3frx_A 249 RYWLAAATAT---------GIKVFSLD 266 (319)
T ss_dssp SSEEEEEETT---------EEEEEEET
T ss_pred CCEEEEEcCC---------CcEEEEeC
Confidence 9999988754 36677654
No 56
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6e-39 Score=277.97 Aligned_cols=255 Identities=17% Similarity=0.266 Sum_probs=213.5
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCC---CceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCC
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH---GKVKDIELRGHADSVDQLCWDPKHADLIATASGDK 89 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~---~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~ 89 (314)
...+.+|...|.+++|+|+|++|++|+.|+.+++|++..... .......+.+|.+.|.++.|.|.++..|++|+.|+
T Consensus 101 ~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~ 180 (380)
T 3iz6_a 101 THAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQ 180 (380)
T ss_dssp EEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTS
T ss_pred ceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCC
Confidence 456788999999999999999999999999999999864321 11122346799999999999998777899999999
Q ss_pred cEEEEeCCCCceeeeEE------ecCceEEEEEcc-CCCEEEEEeCCCcEEEEEccCC-eEeeee-ccCcceeeEEeccC
Q 021319 90 TVRLWDARSGKCSQQAE------LSGENINITYKP-DGTHIAVGNRDDELTILDVRKF-KPIHRR-KFGYEVNEIAWNMT 160 (314)
Q Consensus 90 ~v~iwd~~~~~~~~~~~------~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~-~~~~~~-~~~~~~~~~~~~~~ 160 (314)
+|++||+.++++...+. .......+.+++ +++++++|+.|+.|++||++.. +.+... .+...+.+++|+|+
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD 260 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC
Confidence 99999999998766542 234566788876 8899999999999999999843 444433 35567999999999
Q ss_pred CCeEEEEcCCceEEEEeCCCCCceeeeeecc-------cceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe----
Q 021319 161 GEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-------AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF---- 229 (314)
Q Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~---- 229 (314)
+..+++++.|+.+++|+....+.+..+..+. ..+++++|+|+|++|++|+.||.|++||+..++.+..+
T Consensus 261 ~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~ 340 (380)
T 3iz6_a 261 GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQ 340 (380)
T ss_dssp SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSC
T ss_pred CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEeccc
Confidence 9999999999999999998877666554332 24889999999999999999999999999988877776
Q ss_pred eecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCe
Q 021319 230 TKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 267 (314)
Q Consensus 230 ~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~ 267 (314)
.+|...|.+++|+|++++|+|||.|+.|++|++...+.
T Consensus 341 ~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 341 NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 56888999999999999999999999999999876543
No 57
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-37 Score=266.40 Aligned_cols=248 Identities=21% Similarity=0.279 Sum_probs=212.9
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCC--ceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG--KVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~ 90 (314)
...+..|...|.+++|+|+|.+|++|+.|+.+++|++...... ......+.+|...|.+++|+|++ ..|++++.|++
T Consensus 99 ~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~ 177 (354)
T 2pbi_B 99 EHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGT 177 (354)
T ss_dssp EEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSE
T ss_pred ceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCc
Confidence 3456678899999999999999999999999999998643211 12234567899999999999974 68899999999
Q ss_pred EEEEeCCCCceeeeEEec-CceEEEEEcc--CCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEE
Q 021319 91 VRLWDARSGKCSQQAELS-GENINITYKP--DGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFL 166 (314)
Q Consensus 91 v~iwd~~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 166 (314)
|++||+.++++...+..+ ..+.++.+.| +++.|++++.|+.+++||+++.+.+.... +...+.+++|+|++..+++
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 257 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFAS 257 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEE
Confidence 999999999887776544 4456677876 57899999999999999999988776654 4667999999999999999
Q ss_pred EcCCceEEEEeCCCCCceeeeeec--ccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccC
Q 021319 167 TTGNGTVEVLTYPSLRPLDTVVAH--TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHT 244 (314)
Q Consensus 167 ~~~~g~~~~~~~~~~~~~~~~~~~--~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~ 244 (314)
++.|+.+++|++...+.+..+..+ ...+.+++|+|++++|++|+.|+.|++||+.++.++..+.+|..+|.+++|+|+
T Consensus 258 ~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 258 GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC
Confidence 999999999999876655544432 346899999999999999999999999999999888899999999999999999
Q ss_pred CcEEEEecCCceEEEEE
Q 021319 245 GDYIASASEDLFIDISN 261 (314)
Q Consensus 245 ~~~l~s~s~d~~v~v~~ 261 (314)
+++|+||+.|+.|++|+
T Consensus 338 g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 338 GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSCEEEEETTSEEEEEC
T ss_pred CCEEEEEcCCCCEEecC
Confidence 99999999999999995
No 58
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.2e-37 Score=283.58 Aligned_cols=286 Identities=17% Similarity=0.258 Sum_probs=229.9
Q ss_pred ceeeecccccEEEEEECCCCC-EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCC---CEEEEEEcCCCCCEEEEEeCC
Q 021319 13 SREYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD---SVDQLCWDPKHADLIATASGD 88 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~-~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~D 88 (314)
...+.+|...|++++|+|+++ .|++++.|+.|++||+... .....+.+|.. .|.+++|+|+++++|++++.|
T Consensus 153 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 228 (615)
T 1pgu_A 153 LGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF----KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 228 (615)
T ss_dssp EEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB----EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT
T ss_pred ceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc----ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC
Confidence 355678999999999999998 8999999999999998642 23446778999 999999999745799999999
Q ss_pred CcEEEEeCCCCceeeeE-----EecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccC-----cceeeEEec
Q 021319 89 KTVRLWDARSGKCSQQA-----ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG-----YEVNEIAWN 158 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~~~~~~~ 158 (314)
+.|++||+++++..... .....+..++|+ +++++++++.|+.+++||+++.+.+...... ..+..+.|.
T Consensus 229 g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 229 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE
T ss_pred CeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC
Confidence 99999999999887776 455667789999 9999999999999999999998887766543 456667775
Q ss_pred cCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCC------------------------------------
Q 021319 159 MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPM------------------------------------ 202 (314)
Q Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~------------------------------------ 202 (314)
++..+++++.++.+++|+....+++..+.+|...+++++| |+
T Consensus 308 -~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~ 385 (615)
T 1pgu_A 308 -GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQE 385 (615)
T ss_dssp -ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTC
T ss_pred -CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcE
Confidence 8889999999999999987765555444444433333333 21
Q ss_pred ----------------------------------------------------------------------CCEEEEeeC-
Q 021319 203 ----------------------------------------------------------------------GRYFAVGSA- 211 (314)
Q Consensus 203 ----------------------------------------------------------------------~~~l~t~~~- 211 (314)
++++++++.
T Consensus 386 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 465 (615)
T 1pgu_A 386 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEE 465 (615)
T ss_dssp CEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETT
T ss_pred EEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecC
Confidence 445555555
Q ss_pred CCeEEEeeCCCcEEE-EEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe--ccCccceeEEcC----
Q 021319 212 DSLVSLWDISEMLCV-RTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP--CRAAMNSVEWNP---- 284 (314)
Q Consensus 212 dg~i~vwd~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~--~~~~i~~v~~~~---- 284 (314)
|+.|++||+.++... ..+..|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+. +...|++++|+|
T Consensus 466 d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 545 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKG 545 (615)
T ss_dssp TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC--
T ss_pred CCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccc
Confidence 666666666555443 4556678899999999999999999999999999999999888765 678899999999
Q ss_pred ------CCCeeEEEecCCcccccccceEEeccccC
Q 021319 285 ------KYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 285 ------~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
++++||+++.| |+++||+++.
T Consensus 546 ~~~~~~~~~~l~~~~~d--------g~i~iw~~~~ 572 (615)
T 1pgu_A 546 ANEEEIEEDLVATGSLD--------TNIFIYSVKR 572 (615)
T ss_dssp ----CCSCCEEEEEETT--------SCEEEEESSC
T ss_pred ccccccCCCEEEEEcCC--------CcEEEEECCC
Confidence 99999999987 5788998864
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.5e-37 Score=303.47 Aligned_cols=248 Identities=21% Similarity=0.287 Sum_probs=213.7
Q ss_pred ccceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc
Q 021319 11 LHSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~ 90 (314)
.....+.+|.+.|++++|+|+|++|++|+.||+|++||+.+.. ....+.+|...|.+++|+|++ .++++++.|++
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~----~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~ 680 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE----KLLDIKAHEDEVLCCAFSSDD-SYIATCSADKK 680 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTS-SEEEEEETTSE
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC----EEEEeccCCCCEEEEEEecCC-CEEEEEeCCCe
Confidence 3445678999999999999999999999999999999997632 334678999999999999975 69999999999
Q ss_pred EEEEeCCCCceeeeEEec-CceEEEEEcc--CCCEEEEEeCCCcEEEEEccCCeEeeee-ccCcceeeEEeccCCCeEEE
Q 021319 91 VRLWDARSGKCSQQAELS-GENINITYKP--DGTHIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFL 166 (314)
Q Consensus 91 v~iwd~~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 166 (314)
|++||+.++++......+ ..+.+++|+| ++..+++++.|+.+.+||+++.+.+... .+...+.+++|+|++..+++
T Consensus 681 v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred EEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEE
Confidence 999999999887776543 4566799999 5668999999999999999998877664 35667999999999999999
Q ss_pred EcCCceEEEEeCCCCCceee------------------------------------------------------e-eecc
Q 021319 167 TTGNGTVEVLTYPSLRPLDT------------------------------------------------------V-VAHT 191 (314)
Q Consensus 167 ~~~~g~~~~~~~~~~~~~~~------------------------------------------------------~-~~~~ 191 (314)
++.+|.+++|+....+.... + .+|.
T Consensus 761 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 761 CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH 840 (1249)
T ss_dssp EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS
T ss_pred EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC
Confidence 99999999998754322111 1 1567
Q ss_pred cceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECC
Q 021319 192 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVH 263 (314)
Q Consensus 192 ~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~ 263 (314)
..+.+++|+|+++++++++.||.|++||+.++..+..+.+|...|.+++|+|++++|++++.|+.+++|++.
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 789999999999999999999999999999999999999999999999999999999999999999999853
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-37 Score=269.15 Aligned_cols=280 Identities=17% Similarity=0.253 Sum_probs=229.6
Q ss_pred eccccc--EEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 17 TGHKKK--VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 17 ~gH~~~--V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
.+|... +.+++|++ ..+++++.|+.|++|++++.. ........|...|.+++|+|+ +.+|++|+.|+.|++|
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~---~~~~~~~~~~~~v~~v~~s~~-~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGS---VSALAETDESTYVASVKWSHD-GSFLSVGLGNGLVDIY 161 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCC---EEEEEECCTTCCEEEEEECTT-SSEEEEEETTSCEEEE
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCc---EeEeeecCCCCCEEEEEECCC-CCEEEEECCCCeEEEE
Confidence 366654 44566664 568899999999999997642 222223348999999999996 4799999999999999
Q ss_pred eCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccC-CeEeeee-ccCcceeeEEeccCCCeEEEEcCCc
Q 021319 95 DARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRK-FKPIHRR-KFGYEVNEIAWNMTGEMFFLTTGNG 171 (314)
Q Consensus 95 d~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g 171 (314)
|+.+++....... ...+.+++| ++..+++++.|+.+.+||++. ...+... .+...+.+++|+|++..+++++.++
T Consensus 162 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 162 DVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 9999887766643 445567777 567999999999999999984 3333333 4567899999999999999999999
Q ss_pred eEEEEeCCCCCceeeeeecccceEEEEECCCC-CEEEEee--CCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEE
Q 021319 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMG-RYFAVGS--ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYI 248 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~l~t~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 248 (314)
.+++|++...+++..+..|...+.+++|+|++ .++++++ .|+.|++||+.+++++..+. +...+.+++|+|++++|
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l 318 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEI 318 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEE
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeE
Confidence 99999999888888888899999999999976 4666655 79999999999998888875 56689999999999999
Q ss_pred EE--ecCCceEEEEECCCCCeEEEE---eccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 249 AS--ASEDLFIDISNVHTGRTVHQI---PCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 249 ~s--~s~d~~v~v~~~~~~~~~~~~---~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
++ |+.|+.|++|++.+++..... .+...|++++|+|++.+|++++.| |+++||+++.
T Consensus 319 ~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d--------g~i~iw~~~~ 380 (401)
T 4aez_A 319 MSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD--------ENLKFWRVYD 380 (401)
T ss_dssp EEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT--------SEEEEEECCC
T ss_pred EEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC--------CcEEEEECCC
Confidence 99 558999999999887655443 256789999999999999999977 6899999853
No 61
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=265.47 Aligned_cols=252 Identities=20% Similarity=0.295 Sum_probs=200.7
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA 96 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~ 96 (314)
.+|...|++++|+|+|++|++|+.|++++||+++... ......+.+|...|.+++|+|+ +++|++|+.|++|++||+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~--~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD--FECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC---EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC--eEEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEEC
Confidence 6899999999999999999999999999999986532 1233467899999999999997 479999999999999999
Q ss_pred CCCcee---eeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEe--eee-ccCcceeeEEeccCCCeEEEEcC
Q 021319 97 RSGKCS---QQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPI--HRR-KFGYEVNEIAWNMTGEMFFLTTG 169 (314)
Q Consensus 97 ~~~~~~---~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
+.+... .... ....+..++|+|++++|++++.|+.+++||++..+.. ... .+...+.+++|+|+++.+++++.
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 135 DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp CTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 876432 2222 2345678999999999999999999999999877543 222 34567999999999999999999
Q ss_pred CceEEEEeCCCCC---------------ceeeeee-cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE---------
Q 021319 170 NGTVEVLTYPSLR---------------PLDTVVA-HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML--------- 224 (314)
Q Consensus 170 ~g~~~~~~~~~~~---------------~~~~~~~-~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~--------- 224 (314)
|+.+++|+..... .+..+.+ |...|++++|+|++..|++++.|+.|++|+.....
T Consensus 215 D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~ 294 (345)
T 3fm0_A 215 DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSL 294 (345)
T ss_dssp TSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEE
T ss_pred CCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEE
Confidence 9999999852211 1122222 78889999999999999999999999999986431
Q ss_pred EEEEeeecccCeEEEEEccCC-cEEEEecCCceEEEEECCCCCeEEEE
Q 021319 225 CVRTFTKLEWPVRTISFSHTG-DYIASASEDLFIDISNVHTGRTVHQI 271 (314)
Q Consensus 225 ~~~~~~~~~~~v~~~~~sp~~-~~l~s~s~d~~v~v~~~~~~~~~~~~ 271 (314)
......+|...|.+++|+|++ .+|||||.|+.|++|++.+++.+...
T Consensus 295 ~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 295 TAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 122345788899999999998 59999999999999999988776554
No 62
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=255.44 Aligned_cols=276 Identities=17% Similarity=0.264 Sum_probs=223.6
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCcee
Q 021319 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCS 102 (314)
Q Consensus 23 V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~ 102 (314)
.++|+||+++ +|++ +.|++|+|||++++. ....+.+.+|...|.+++|+|++ ++|++|+.|++|++||+.++++.
T Consensus 28 ~~~l~WS~~~-~lAv-g~D~tV~iWd~~tg~--~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAV-ALDNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEE-EETTEEEEEETTTCC--EEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEE-EeCCEEEEEECCCCC--EEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeE
Confidence 5789999886 5555 469999999997643 33344567899999999999975 69999999999999999999887
Q ss_pred eeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEe-ee-eccCcceeeEEeccCCCeEEEEcCCceEEEEeCCC
Q 021319 103 QQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPI-HR-RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPS 180 (314)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 180 (314)
.....+.... .++.+++..+++++.++.+.+|+....... .. ..+...+..+.+.+.++.++++..++.+++|+...
T Consensus 103 ~~~~~h~~~~-~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 103 RNMTSHSARV-GSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEECCSSCE-EEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEecCccceE-EEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 7765443332 345667889999999999999998765433 22 33456788899999999999999999999999876
Q ss_pred CCc----eeeeeecccceEEEEECCCCCE---EEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEec-
Q 021319 181 LRP----LDTVVAHTAGCYCIAIDPMGRY---FAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS- 252 (314)
Q Consensus 181 ~~~----~~~~~~~~~~i~~i~~~~~~~~---l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s- 252 (314)
.+. ......+...+.+++++|++.. +++++.++.|++||.......... .+...+..++|+|++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEEC
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEE
Confidence 543 2334567788999999997653 457788999999999887766554 4666799999999999887654
Q ss_pred -CCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 253 -EDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 253 -~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
.|+.|++||+.+++++..+. |.+.|++|+|+|++++||++|.| |++|||++.+
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D--------~~v~iWd~~~ 315 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD--------ETLRLWRCFE 315 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT--------TEEEEECCSC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC--------CeEEEEECCC
Confidence 89999999999999998886 57899999999999999999987 6899999854
No 63
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.8e-37 Score=268.53 Aligned_cols=275 Identities=17% Similarity=0.277 Sum_probs=224.5
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCce
Q 021319 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101 (314)
Q Consensus 22 ~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~ 101 (314)
.++.|+||++ +.|++| .|++|+|||+.++. ....+.+.+|...|.+++|+|++ ++|++|+.|++|++||+.++++
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~--~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGD--ILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKR 181 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCC--EEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCC--EEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcE
Confidence 3567999975 466655 59999999997643 23344567899999999999974 7999999999999999999988
Q ss_pred eeeEEecC-ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEe-ee-eccCcceeeEEeccCCCeEEEEcCCceEEEEeC
Q 021319 102 SQQAELSG-ENINITYKPDGTHIAVGNRDDELTILDVRKFKPI-HR-RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTY 178 (314)
Q Consensus 102 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 178 (314)
......+. ...++ .+++..+++++.|+.+.+||.+..... .. ..+...+..+.+++.+..++++..++.+.+|+.
T Consensus 182 ~~~~~~h~~~v~~~--s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 182 LRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEEECCCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEEeCCCCceEEE--eeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 77665433 33344 456789999999999999998765432 22 234567889999999999999999999999998
Q ss_pred CCCC----ceeeeeecccceEEEEECCCCC-EEEE--eeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEe
Q 021319 179 PSLR----PLDTVVAHTAGCYCIAIDPMGR-YFAV--GSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 251 (314)
Q Consensus 179 ~~~~----~~~~~~~~~~~i~~i~~~~~~~-~l~t--~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 251 (314)
...+ .+.....|...|.+++|+|.+. ++++ |+.|++|++||+.++.++..+..+ ..+.++.|+|+++.++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~ 338 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISG 338 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEE
Confidence 6543 3445667889999999999654 5554 567999999999999998887654 468999999999998876
Q ss_pred c--CCceEEEEECCCCCeEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 252 S--EDLFIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 252 s--~d~~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+ .|+.|+|||+.+++++..+. |.+.|++|+|+|++.+||+||.| |++|||++.
T Consensus 339 sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D--------~tvriWdv~ 394 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD--------ETLRLWRCF 394 (420)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT--------TEEEEECCS
T ss_pred EecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC--------CeEEEEECC
Confidence 5 79999999999999998886 57799999999999999999988 689999984
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.8e-39 Score=279.71 Aligned_cols=277 Identities=12% Similarity=0.155 Sum_probs=225.1
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCce
Q 021319 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101 (314)
Q Consensus 22 ~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~ 101 (314)
.+++++|+|++++|++++.|+.|++|++...... ..+.+| ..+....|+|+ +++|++++.|+.|++||+.++++
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~----~~~~~~-~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGS----KMLKRA-DYTAVDTAKLQ-MRRFILGTTEGDIKVLDSNFNLQ 131 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETT----TTSCSC-CEEEEEEECSS-SCEEEEEETTSCEEEECTTSCEE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccccee----eEEecC-CceEEEEEecC-CCEEEEEECCCCEEEEeCCCcce
Confidence 4558999999999999999999999998653211 123344 33444466776 57999999999999999998877
Q ss_pred eeeE-EecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcCCceEEEEeCC
Q 021319 102 SQQA-ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYP 179 (314)
Q Consensus 102 ~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 179 (314)
.... .....+.+++|+|++++|++++.|+.|++||+++.+.+.... +...+.+++|+|++..+++++.++.+++|+..
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 6654 345667789999999999999999999999999887766654 56789999999999999999999999999998
Q ss_pred CCCceeeeee---cccce---------------------EEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee-eccc
Q 021319 180 SLRPLDTVVA---HTAGC---------------------YCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEW 234 (314)
Q Consensus 180 ~~~~~~~~~~---~~~~i---------------------~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~-~~~~ 234 (314)
..+.+..+.. +...+ .+++|+|++++|++|+.||.|++||++++..+..+. .|..
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC 291 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCC
Confidence 8777766654 33334 445568999999999999999999999887776664 4678
Q ss_pred CeEEEEEccCCc-EEEEecCCceEEEEECCCCCe-EEEEe--ccCccceeEEcCCCCeeEEEecCCcccccccceEEecc
Q 021319 235 PVRTISFSHTGD-YIASASEDLFIDISNVHTGRT-VHQIP--CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYG 310 (314)
Q Consensus 235 ~v~~~~~sp~~~-~l~s~s~d~~v~v~~~~~~~~-~~~~~--~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~ 310 (314)
+|.+++|+|+++ +|++|+.|+.|++||+.+++. +..+. +...|+++.|+ ++.+|++++.| |+++||+
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d--------~~v~iw~ 362 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALFVSSGFD--------TSIKLDI 362 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEEEEETTT--------EEEEEEE
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEEEEecCC--------ccEEEEe
Confidence 899999999999 999999999999999998754 55554 45678888665 67899999977 6899999
Q ss_pred ccC
Q 021319 311 FEN 313 (314)
Q Consensus 311 ~~~ 313 (314)
++.
T Consensus 363 ~~~ 365 (420)
T 3vl1_A 363 ISD 365 (420)
T ss_dssp ECC
T ss_pred ccC
Confidence 753
No 65
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.8e-37 Score=280.71 Aligned_cols=283 Identities=18% Similarity=0.242 Sum_probs=227.1
Q ss_pred ceeeecccc---cEEEEEECCC-CCEEEEeeCCCcEEEeecCCCCCCceeeEEe-e---cCCCCEEEEEEcCCCCCEEEE
Q 021319 13 SREYTGHKK---KVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGHGKVKDIEL-R---GHADSVDQLCWDPKHADLIAT 84 (314)
Q Consensus 13 ~~~~~gH~~---~V~~v~~s~~-g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~-~---~h~~~v~~l~~~~~~~~~l~s 84 (314)
.+.+.+|.. .|++++|+|+ +++|++++.|+.|++||+.... ....+ . +|...|.+++|+ + +.+|++
T Consensus 196 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~~ 269 (615)
T 1pgu_A 196 SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE----FLKYIEDDQEPVQGGIFALSWL-D-SQKFAT 269 (615)
T ss_dssp EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC----EEEECCBTTBCCCSCEEEEEES-S-SSEEEE
T ss_pred eeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC----EeEEecccccccCCceEEEEEc-C-CCEEEE
Confidence 355678998 9999999999 9999999999999999987532 22344 4 899999999999 4 579999
Q ss_pred EeCCCcEEEEeCCCCceeeeEEec-----CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec------------
Q 021319 85 ASGDKTVRLWDARSGKCSQQAELS-----GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK------------ 147 (314)
Q Consensus 85 ~~~D~~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------------ 147 (314)
++.|+.|++||+++++........ .....+.+. ++..+++++.++.+.+||+++.+++....
T Consensus 270 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 348 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVN 348 (615)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETT
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEec
Confidence 999999999999998877766544 334555554 77888888888888888876544432221
Q ss_pred --------------------------------------------------------------------------------
Q 021319 148 -------------------------------------------------------------------------------- 147 (314)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (314)
T Consensus 349 ~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 428 (615)
T 1pgu_A 349 PLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDD 428 (615)
T ss_dssp TTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSE
T ss_pred CcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCc
Confidence
Q ss_pred ----------------cCcceeeEEeccCCCeEEEEcC-CceEEEEeCCCCCce-eeeeecccceEEEEECCCCCEEEEe
Q 021319 148 ----------------FGYEVNEIAWNMTGEMFFLTTG-NGTVEVLTYPSLRPL-DTVVAHTAGCYCIAIDPMGRYFAVG 209 (314)
Q Consensus 148 ----------------~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~l~t~ 209 (314)
....+.+++++ ++.++++.. ++.+++|+....+.. ..+..|...+++++|+|++++|+++
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 506 (615)
T 1pgu_A 429 LLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 506 (615)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEc
Confidence 11112222232 556666666 888888887665433 4566789999999999999999999
Q ss_pred eCCCeEEEeeCCCcEEEEEeee-cccCeEEEEEcc----------CCcEEEEecCCceEEEEECCCC-CeEEEEe-ccCc
Q 021319 210 SADSLVSLWDISEMLCVRTFTK-LEWPVRTISFSH----------TGDYIASASEDLFIDISNVHTG-RTVHQIP-CRAA 276 (314)
Q Consensus 210 ~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~sp----------~~~~l~s~s~d~~v~v~~~~~~-~~~~~~~-~~~~ 276 (314)
+.||.|++||+.+++.+..+.. |..+|.+++|+| ++++||+++.|+.|++|++.++ +.+..+. |...
T Consensus 507 ~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~ 586 (615)
T 1pgu_A 507 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDG 586 (615)
T ss_dssp ETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTC
T ss_pred CCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccc
Confidence 9999999999999999988887 999999999999 9999999999999999999987 6666654 5678
Q ss_pred cceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 277 MNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 277 i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
|++++|+|+++ |++++.| |+++||+++.
T Consensus 587 v~~l~~s~~~~-l~s~~~d--------~~v~iw~~~~ 614 (615)
T 1pgu_A 587 VNNLLWETPST-LVSSGAD--------ACIKRWNVVL 614 (615)
T ss_dssp EEEEEEEETTE-EEEEETT--------SCEEEEEEC-
T ss_pred eEEEEEcCCCC-eEEecCC--------ceEEEEeeec
Confidence 99999999999 9999977 6899999864
No 66
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.7e-37 Score=263.97 Aligned_cols=246 Identities=18% Similarity=0.226 Sum_probs=197.3
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
.+.+.+|...|++++|+|++.+|+||+.|++|++||+.+.. ....+.+|...|.+++|+|++ .+|++++.|++|+
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT----TYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIK 143 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC----EEEEEECCCSCEEEEEECSST-TEEEEEETTSCEE
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc----EEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEE
Confidence 45678999999999999999999999999999999997532 334678999999999999975 6899999999999
Q ss_pred EEeCCCCceeeeE---EecCceEEEEEccCC----------CEEEEEeCCCcEEEEEccCCeEeee-eccCcceeeEEec
Q 021319 93 LWDARSGKCSQQA---ELSGENINITYKPDG----------THIAVGNRDDELTILDVRKFKPIHR-RKFGYEVNEIAWN 158 (314)
Q Consensus 93 iwd~~~~~~~~~~---~~~~~~~~~~~~~~~----------~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~ 158 (314)
+||+......... .....+.+++|+|++ .++++++.|+.|++||.. .+.... ..+...+.+++|+
T Consensus 144 ~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s 222 (343)
T 2xzm_R 144 LWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSIS 222 (343)
T ss_dssp EEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEEC
T ss_pred EEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEEC
Confidence 9999743322211 123446678899886 789999999999999954 344333 3456679999999
Q ss_pred cCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEE--Eee------
Q 021319 159 MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVR--TFT------ 230 (314)
Q Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~--~~~------ 230 (314)
|+++++++++.++.+++|+............+...+.+++|+|++++++++ .|+.|++||+.+..... .+.
T Consensus 223 ~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~ 301 (343)
T 2xzm_R 223 PNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITK 301 (343)
T ss_dssp TTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGG
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchh
Confidence 999999999999999999985433222233456679999999999988755 57789999997654332 333
Q ss_pred -----ecccCeEEEEEccCCcEEEEecCCceEEEEECCCC
Q 021319 231 -----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTG 265 (314)
Q Consensus 231 -----~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~ 265 (314)
+|...+.+++|+|++++|++|+.|+.|++|++.++
T Consensus 302 ~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 302 AEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp BTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 46667999999999999999999999999998654
No 67
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.1e-37 Score=264.80 Aligned_cols=275 Identities=11% Similarity=0.147 Sum_probs=210.6
Q ss_pred eeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
.+.+|.+.|++++|+|||++|++|+.|+ ++||++++.. .. ...+...+..+.+.+..+.++++++.|++|++|
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 86 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA----HI--MSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIW 86 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE----EE--EEEECSCCCEEEECTTSSEEEEECSSTTEEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc----ee--eeeecCCeEEEEEcCCCCEEEEEECCccEEEEE
Confidence 4578999999999999999999998775 7899986421 11 122223477778887755455788889999999
Q ss_pred eCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCC-eEeeeeccCcceeeEEeccCCCeEEE--EcCCc
Q 021319 95 DARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKF-KPIHRRKFGYEVNEIAWNMTGEMFFL--TTGNG 171 (314)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g 171 (314)
|..++++.........+.++.++++. ++++ .++.+++||+.+. +.+..... +...+++++ ..+++ +..+|
T Consensus 87 d~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~sg~~~g 159 (355)
T 3vu4_A 87 DDVKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYSNEFNLG 159 (355)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEEESSCTT
T ss_pred ECCCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEEeCCCcCc
Confidence 99999988888877788889988764 4443 4789999999887 55554443 334455555 55655 47899
Q ss_pred eEEEEeCCCCC---------------c-eeeeeecccceEEEEECCCCCEEEEeeCCCe-EEEeeCCCcEEEEEee-e-c
Q 021319 172 TVEVLTYPSLR---------------P-LDTVVAHTAGCYCIAIDPMGRYFAVGSADSL-VSLWDISEMLCVRTFT-K-L 232 (314)
Q Consensus 172 ~~~~~~~~~~~---------------~-~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~-i~vwd~~~~~~~~~~~-~-~ 232 (314)
.+++|+....+ + +..+.+|...|++++|+|++++||+|+.|++ |++||+++++++.++. + |
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 99999997644 2 6678899999999999999999999999998 9999999999999998 4 8
Q ss_pred ccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEE--E--------------------Eec--cCccceeEEcCCCCe
Q 021319 233 EWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVH--Q--------------------IPC--RAAMNSVEWNPKYNL 288 (314)
Q Consensus 233 ~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~--~--------------------~~~--~~~i~~v~~~~~~~~ 288 (314)
..+|.+++|+|++++|++++.|+.|++||+..+.... . ++. ......++|+|+++.
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~ 319 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence 8999999999999999999999999999997653211 1 000 112477999999999
Q ss_pred eEEEecCCcccccccceEEeccc
Q 021319 289 LAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 289 la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
|++++.| |.+++|.+
T Consensus 320 l~~~~~d--------g~~~~~~~ 334 (355)
T 3vu4_A 320 VVVWPHT--------RMIETFKV 334 (355)
T ss_dssp EEEETTT--------TEEEEEEE
T ss_pred EEEEeCC--------CeEEEEEE
Confidence 9999987 45667665
No 68
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.3e-36 Score=265.98 Aligned_cols=280 Identities=20% Similarity=0.330 Sum_probs=240.3
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
.+.+.+|.+.|.+++|+ +++|++|+.|++|++||+++. .....+.+|...|.++.|++ +.+++|+.|++|+
T Consensus 152 ~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~ 222 (445)
T 2ovr_B 152 LRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG----ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLR 222 (445)
T ss_dssp EEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEE
T ss_pred EEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC----cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEE
Confidence 45678999999999997 679999999999999998753 23346789999999999963 5799999999999
Q ss_pred EEeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcCC
Q 021319 93 LWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGN 170 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
+||+.++++......+ ..+.++.+ +++.+++++.|+.+.+||+++.+.+.... +...+.++.+ ++..+++++.+
T Consensus 223 ~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 298 (445)
T 2ovr_B 223 VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLD 298 (445)
T ss_dssp EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCC
Confidence 9999999877766543 34456666 78899999999999999999988877765 4556778877 88999999999
Q ss_pred ceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee---cccCeEEEEEccCCcE
Q 021319 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK---LEWPVRTISFSHTGDY 247 (314)
Q Consensus 171 g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---~~~~v~~~~~sp~~~~ 247 (314)
+.+++|+....+.+..+.+|...+.+++++ ++++++|+.||.|++||+++++++..+.. |..+|.+++|+ +++
T Consensus 299 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 374 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNF 374 (445)
T ss_dssp SCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSE
T ss_pred CeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCE
Confidence 999999999988888888999989988874 67999999999999999999999888876 77789999995 689
Q ss_pred EEEecCCceEEEEECCCCCeEEEE------eccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 248 IASASEDLFIDISNVHTGRTVHQI------PCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 248 l~s~s~d~~v~v~~~~~~~~~~~~------~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
|++|+.|+.|++||+.+++.+..+ .+.+.|.+++|+|++.+||+++.|+. +...+.||+|+.
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~----~~~~l~v~df~~ 442 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT----EETKLLVLDFDV 442 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS----SCCEEEEEECCC
T ss_pred EEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC----CccEEEEEECCC
Confidence 999999999999999999998887 34568999999999999999999864 234588999965
No 69
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1e-36 Score=256.83 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=213.5
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
.+.+.+|...|.+++|+|++++|++|+.|+.|++||++... ....+.+|...|.+++|+|++ ++|++|+.|++|+
T Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~ 132 (312)
T 4ery_A 58 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK----CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVR 132 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEE
T ss_pred chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc----EEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEE
Confidence 45678999999999999999999999999999999997532 334678999999999999974 6999999999999
Q ss_pred EEeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec--cCcceeeEEeccCCCeEEEEcC
Q 021319 93 LWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK--FGYEVNEIAWNMTGEMFFLTTG 169 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
+||++++++......+ ..+..++|+|+++++++++.|+.+++||+++.+.+.... ....+..++|+|+++.+++++.
T Consensus 133 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 133 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 9999999877766543 456679999999999999999999999999887766543 3456888999999999999999
Q ss_pred CceEEEEeCCCCCceeeeeecccceE---EEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCc
Q 021319 170 NGTVEVLTYPSLRPLDTVVAHTAGCY---CIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGD 246 (314)
Q Consensus 170 ~g~~~~~~~~~~~~~~~~~~~~~~i~---~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 246 (314)
++.+++|++...+.+..+.+|..... .....+++++|++|+.||.|++||+.+...++.+.+|...|.+++|+|+++
T Consensus 213 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 213 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 292 (312)
T ss_dssp TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC
Confidence 99999999998888777777765533 233446789999999999999999999999999999999999999999999
Q ss_pred EEEEec--CCceEEEEECC
Q 021319 247 YIASAS--EDLFIDISNVH 263 (314)
Q Consensus 247 ~l~s~s--~d~~v~v~~~~ 263 (314)
+|++++ .|+.|++|+..
T Consensus 293 ~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 293 IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEEECTTTCCEEEEECC
T ss_pred ceEEEEccCCccEEEecCC
Confidence 999997 69999999864
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-36 Score=269.04 Aligned_cols=283 Identities=20% Similarity=0.290 Sum_probs=231.7
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCC-CCCEEEEEeCCCcE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKTV 91 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~D~~v 91 (314)
.+.+.+|.+.|.+++|+|++ +|++|+.||+|++||+++. .....+.+|...|.+++|++. ++.++++++.|++|
T Consensus 155 ~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i 229 (464)
T 3v7d_B 155 LLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG----CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 229 (464)
T ss_dssp EEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCE
T ss_pred EEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC----cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcE
Confidence 35577999999999999988 9999999999999999753 234467889999999999852 34789999999999
Q ss_pred EEEeCCCCceeeeE---------------------EecC-ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-c
Q 021319 92 RLWDARSGKCSQQA---------------------ELSG-ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-F 148 (314)
Q Consensus 92 ~iwd~~~~~~~~~~---------------------~~~~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~ 148 (314)
++||++++...... ...+ .....+++++++.+++++.|+.|++||+++.+++.... +
T Consensus 230 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 230 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp EEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 99999876533211 1111 11123457889999999999999999999988877654 5
Q ss_pred CcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEE
Q 021319 149 GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT 228 (314)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~ 228 (314)
...+.++.|+++++.+++++.+|.+++|+....+++..+.+|...+.+++++ ++++++++.||.|++||+.+......
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee
Confidence 6679999999999999999999999999999988888999999999999997 58999999999999999998876655
Q ss_pred eeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEE--EeccCccceeEEcCCCCeeEEEecCCcccccccceE
Q 021319 229 FTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQ--IPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVF 306 (314)
Q Consensus 229 ~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~--~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~ 306 (314)
. .+...+..++|+|++++|++++ |+.|++||+.+++.++. ..+...|.+++|+ ...+++++++|+.. .+
T Consensus 388 ~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~------~i 458 (464)
T 3v7d_B 388 Y-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQS------FL 458 (464)
T ss_dssp E-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEE------EE
T ss_pred e-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeE------EE
Confidence 4 3556788899999999999999 89999999999998875 3456789999998 34556666666543 36
Q ss_pred Eeccc
Q 021319 307 RIYGF 311 (314)
Q Consensus 307 ~~~~~ 311 (314)
++|+|
T Consensus 459 ~~ldf 463 (464)
T 3v7d_B 459 EILDF 463 (464)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 67766
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-37 Score=294.02 Aligned_cols=283 Identities=14% Similarity=0.139 Sum_probs=217.5
Q ss_pred ccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceee-------EEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKD-------IELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 19 H~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~-------~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
|.+.|++++|+|++++|++|+.||+|++||++......... ..+.+|...|.+++|+|.+...+++|+.|+.|
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v 176 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL 176 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE
Confidence 67899999999999999999999999999997532100000 13467999999999999766789999999999
Q ss_pred EEEeCCCCceeeeEEec-------------------CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee--ec---
Q 021319 92 RLWDARSGKCSQQAELS-------------------GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR--RK--- 147 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~--- 147 (314)
+||++++++...+..+ ..+.+++|+|+|++|++++.|+.|++||+++.+++.. ..
T Consensus 177 -lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~ 255 (902)
T 2oaj_A 177 -TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETE 255 (902)
T ss_dssp -EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSC
T ss_pred -EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccc
Confidence 9999998877665433 4477899999999999999999999999866443221 00
Q ss_pred --------------cCcceeeEEe--------------------------------------------------------
Q 021319 148 --------------FGYEVNEIAW-------------------------------------------------------- 157 (314)
Q Consensus 148 --------------~~~~~~~~~~-------------------------------------------------------- 157 (314)
+...+..++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 335 (902)
T 2oaj_A 256 INVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMK 335 (902)
T ss_dssp TTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEE
T ss_pred cCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceE
Confidence 0001111111
Q ss_pred --------------------------------------------------------------------------------
Q 021319 158 -------------------------------------------------------------------------------- 157 (314)
Q Consensus 158 -------------------------------------------------------------------------------- 157 (314)
T Consensus 336 ~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~ 415 (902)
T 2oaj_A 336 IFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNK 415 (902)
T ss_dssp EECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHH
T ss_pred EEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHH
Confidence
Q ss_pred ----------------------------ccCCCeEEEEcCCceEEEEeCCCCCce--eee---------eecccceEEEE
Q 021319 158 ----------------------------NMTGEMFFLTTGNGTVEVLTYPSLRPL--DTV---------VAHTAGCYCIA 198 (314)
Q Consensus 158 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~---------~~~~~~i~~i~ 198 (314)
+|+++.+++++.|++|++|+....... ..+ .+|...|++++
T Consensus 416 ~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~sva 495 (902)
T 2oaj_A 416 LWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKIS 495 (902)
T ss_dssp HHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEE
T ss_pred HHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEE
Confidence 233445566666777777776543211 111 15777899999
Q ss_pred ECCCCCEEEEeeCCCeEEEeeCCCc---------------------------------------------EEEEEeeecc
Q 021319 199 IDPMGRYFAVGSADSLVSLWDISEM---------------------------------------------LCVRTFTKLE 233 (314)
Q Consensus 199 ~~~~~~~l~t~~~dg~i~vwd~~~~---------------------------------------------~~~~~~~~~~ 233 (314)
|+|++++||+|+.||+|++||+.++ +++.++.+|.
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~ 575 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK 575 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCS
T ss_pred ecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCC
Confidence 9999999999999999999998754 3467788899
Q ss_pred cCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEE-------eccCccceeEEc-----CCC---CeeEEEecCCcc
Q 021319 234 WPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQI-------PCRAAMNSVEWN-----PKY---NLLAYAGDDKNK 298 (314)
Q Consensus 234 ~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~-------~~~~~i~~v~~~-----~~~---~~la~~~~d~~~ 298 (314)
.+|.+++|||+| +||+|+.|+.|++||+.++..+... .|.+.|++|+|+ ||+ .+|++++.|
T Consensus 576 ~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D--- 651 (902)
T 2oaj_A 576 GKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM--- 651 (902)
T ss_dssp CSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT---
T ss_pred CcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC---
Confidence 999999999999 9999999999999999887766432 234569999999 885 899999988
Q ss_pred cccccceEEeccc
Q 021319 299 YQADEGVFRIYGF 311 (314)
Q Consensus 299 ~~~~~~~~~~~~~ 311 (314)
|++++|++
T Consensus 652 -----~tv~~wd~ 659 (902)
T 2oaj_A 652 -----GEVITYKI 659 (902)
T ss_dssp -----SEEEEEEE
T ss_pred -----CcEEEEEE
Confidence 68889987
No 72
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2e-36 Score=266.67 Aligned_cols=270 Identities=22% Similarity=0.353 Sum_probs=226.6
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA 96 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~ 96 (314)
.+|...|.+++| ++++|++|+.||.|++||+.+.. ....+.+|...|.+++|+ ++++++|+.||+|++||+
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE----CKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC----EEEEECCCSSCEEEEECC---SSEEEEEETTSCEEEEES
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe----EEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEEEEC
Confidence 457778999987 79999999999999999987532 334678999999999983 469999999999999999
Q ss_pred CCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEee---e-eccCcceeeEEeccCCCeEEEEcCCc
Q 021319 97 RSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIH---R-RKFGYEVNEIAWNMTGEMFFLTTGNG 171 (314)
Q Consensus 97 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~g 171 (314)
.++++......+ ..+.+++++ +..+++++.|+.|.+||+++.+... . ..+...+.++.+ +++.+++++.+|
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 999887766543 445567775 5699999999999999998765432 2 234456777777 788999999999
Q ss_pred eEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEe
Q 021319 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA 251 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 251 (314)
.+++|+....+.+..+.+|...+.+++++ ++++++|+.||.|++||+++++++..+.+|...|.+++| ++.+|++|
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 99999999998888899999999999994 789999999999999999999999999999999999998 78999999
Q ss_pred cCCceEEEEECCCCC---------eEEEEe-ccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 252 SEDLFIDISNVHTGR---------TVHQIP-CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 252 s~d~~v~v~~~~~~~---------~~~~~~-~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+.|+.|++||+.+++ .+..+. +.+.|++++| ++.+|++++.| |+++||++++
T Consensus 353 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~D--------g~i~iwd~~~ 414 (435)
T 1p22_A 353 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD--------DTILIWDFLN 414 (435)
T ss_dssp ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSS--------SEEEEEC---
T ss_pred eCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCC--------CEEEEEECCC
Confidence 999999999987655 555554 5678999999 67889999977 6899999954
No 73
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=257.90 Aligned_cols=245 Identities=20% Similarity=0.271 Sum_probs=187.2
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCC---CceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGH---GKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~---~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
+|.+.|++|+|+|++++|++|+.|++|+||+++.... .......+.+|...|.+++|+|+ +++|++|+.|++|++|
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~iw 134 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWIW 134 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEEE
Confidence 3999999999999999999999999999999853211 11223457899999999999997 4799999999999999
Q ss_pred eCCCC----ceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCC--eEeeee-ccCcceeeEEeccC--CCeE
Q 021319 95 DARSG----KCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKF--KPIHRR-KFGYEVNEIAWNMT--GEMF 164 (314)
Q Consensus 95 d~~~~----~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~-~~~~~~~~~~~~~~--~~~~ 164 (314)
|++.. ++...+. ....+.+++|+|++.+|++++.|+.|++||++.. +++... .+...+.+++|+|+ +..+
T Consensus 135 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 135 ETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp ECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE
T ss_pred eccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE
Confidence 99532 2333332 3345678999999999999999999999998765 344443 34567899999998 6788
Q ss_pred EEEcCCceEEEEeCCCC--------Cceeeeee-cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE--EEE-Eeeec
Q 021319 165 FLTTGNGTVEVLTYPSL--------RPLDTVVA-HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML--CVR-TFTKL 232 (314)
Q Consensus 165 ~~~~~~g~~~~~~~~~~--------~~~~~~~~-~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~--~~~-~~~~~ 232 (314)
++++.|+.+++|++... .....+.. |...|++++|++++ +|++++.||.|++||..++. .+. ....|
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h 293 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCH 293 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTT
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccc
Confidence 99999999999987543 12233333 88899999999765 88999999999999997763 232 23456
Q ss_pred cc-CeEEEEEcc--CCcEEEEecCCceEEEEECCC
Q 021319 233 EW-PVRTISFSH--TGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 233 ~~-~v~~~~~sp--~~~~l~s~s~d~~v~v~~~~~ 264 (314)
.. .|.+++|+| ++++|||||.|+.|++|++.+
T Consensus 294 ~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 294 GVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 65 899999999 789999999999999999864
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=289.74 Aligned_cols=234 Identities=11% Similarity=0.079 Sum_probs=189.3
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
.....||.+.|++++|+|++++||+|+.||+|+||+.... .......|..+|.+++|+| + .+|++++.|++|+
T Consensus 10 ~~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~-----~~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~ 82 (902)
T 2oaj_A 10 ETNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV-----EVVIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVY 82 (902)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC-----EEEEECSSCCCEEEEEEET-T-TEEEEEETTCEEE
T ss_pred cccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc-----EEEEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEE
Confidence 3445689999999999999999999999999999987532 1122345888999999999 4 5899999999999
Q ss_pred EEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee------------eccCcceeeEEeccC
Q 021319 93 LWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR------------RKFGYEVNEIAWNMT 160 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~------------~~~~~~~~~~~~~~~ 160 (314)
+||+.++++...+.....+.+++|+|+++++++|+.|+.|++||++..+.... ..+...+.+++|+|+
T Consensus 83 lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 83 VLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp EEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 99999998887777677788999999999999999999999999988765311 123457899999996
Q ss_pred -CCeEEEEcCCceEEEEeCCCCCceeeeeec------------------ccceEEEEECCCCCEEEEeeCCCeEEEeeCC
Q 021319 161 -GEMFFLTTGNGTVEVLTYPSLRPLDTVVAH------------------TAGCYCIAIDPMGRYFAVGSADSLVSLWDIS 221 (314)
Q Consensus 161 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------------------~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~ 221 (314)
+..++++..++.+ +|++...+++..+..| ...|++++|+|+|++||+|+.||.|++||++
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 4688899999999 9999887777666554 4679999999999999999999999999999
Q ss_pred CcEEEEE--ee---e-------------cccCeEEEEEc----cCC-cEEEEecCC
Q 021319 222 EMLCVRT--FT---K-------------LEWPVRTISFS----HTG-DYIASASED 254 (314)
Q Consensus 222 ~~~~~~~--~~---~-------------~~~~v~~~~~s----p~~-~~l~s~s~d 254 (314)
+++++.. +. . +..+|.+++|+ |++ .+|++|+.|
T Consensus 242 ~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 242 SGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSI 297 (902)
T ss_dssp TCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECS
T ss_pred CCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCC
Confidence 8877653 21 1 23368888885 443 456666443
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=262.03 Aligned_cols=251 Identities=19% Similarity=0.271 Sum_probs=207.6
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCC-CCCEEEEEeCCCcE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPK-HADLIATASGDKTV 91 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~D~~v 91 (314)
.+.+.+|.+.|++++|+|++++|++|+.|+.|+||+++... ......+.+|...|.+++|++. ++++|++++.|+.|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc--ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 45688999999999999999999999999999999986321 2233467899999999999865 25799999999999
Q ss_pred EEEeCCCCce--eeeEE-ecCceEEEEEccC--CCEEEEEeCCCcEEEEEccCCeEe---eeeccCcceeeEEecc----
Q 021319 92 RLWDARSGKC--SQQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPI---HRRKFGYEVNEIAWNM---- 159 (314)
Q Consensus 92 ~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~~---- 159 (314)
++||+.+++. ..... ....+.+++|+|+ +.++++++.|+.+.+||++..... ....+...+.++.|+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 9999998863 33332 3456778999999 999999999999999999876322 2234566789999999
Q ss_pred ---------CCCeEEEEcCCceEEEEeCCCCC----ceeeeeecccceEEEEECCC---CCEEEEeeCCCeEEEeeCCCc
Q 021319 160 ---------TGEMFFLTTGNGTVEVLTYPSLR----PLDTVVAHTAGCYCIAIDPM---GRYFAVGSADSLVSLWDISEM 223 (314)
Q Consensus 160 ---------~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~i~~i~~~~~---~~~l~t~~~dg~i~vwd~~~~ 223 (314)
++..+++++.++.+++|++.... ....+.+|...+++++|+|+ +++|++++.||.|++||+...
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 68999999999999999986554 33456679999999999999 899999999999999999875
Q ss_pred E---EEEE--eeecccCeEEEEEccCCcEEEEecCCceEEEEECCCC
Q 021319 224 L---CVRT--FTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTG 265 (314)
Q Consensus 224 ~---~~~~--~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~ 265 (314)
. .... ...+...|.+++|+|++++|++++.|+.|++|++..+
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 242 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 2 2222 2347788999999999999999999999999998744
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.9e-37 Score=265.91 Aligned_cols=281 Identities=16% Similarity=0.204 Sum_probs=224.8
Q ss_pred cEEEEEECCCCCEE-EEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC-
Q 021319 22 KVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG- 99 (314)
Q Consensus 22 ~V~~v~~s~~g~~l-~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~- 99 (314)
....++++|+...+ ++++.||.|+||+++...........+.+|...|.+++|+|.++++|++|+.|++|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 44568888887654 4578999999999864321111122467899999999999955689999999999999999887
Q ss_pred ------ceeeeEE-ecCceEEEEEccCC-CEEEEEeCCCcEEEEEccCCeEeeeec---cCcceeeEEeccCCCeEEEEc
Q 021319 100 ------KCSQQAE-LSGENINITYKPDG-THIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTGEMFFLTT 168 (314)
Q Consensus 100 ------~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 168 (314)
+...... ....+.+++|+|++ ++|++++.|+.|.+||+++.+.+.... +...+.+++|+|++..+++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 3333433 34566789999998 699999999999999999998887762 566799999999999999999
Q ss_pred CCceEEEEeCCCCCceeee-eecccc-eEEEEECCCCCEEEEe---eCCCeEEEeeCCCcEE-EEEee-ecccCeEEEEE
Q 021319 169 GNGTVEVLTYPSLRPLDTV-VAHTAG-CYCIAIDPMGRYFAVG---SADSLVSLWDISEMLC-VRTFT-KLEWPVRTISF 241 (314)
Q Consensus 169 ~~g~~~~~~~~~~~~~~~~-~~~~~~-i~~i~~~~~~~~l~t~---~~dg~i~vwd~~~~~~-~~~~~-~~~~~v~~~~~ 241 (314)
.++.+++|+....+.+..+ ..|... +.+++|+|++++|++| +.|+.|++||+++... +.... .+...+.+++|
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 9999999999988877777 677765 8999999999999999 7999999999987543 22222 45667999999
Q ss_pred ccCCcEEE-EecCCceEEEEECCCCCe-EE---EEeccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 242 SHTGDYIA-SASEDLFIDISNVHTGRT-VH---QIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 242 sp~~~~l~-s~s~d~~v~v~~~~~~~~-~~---~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+|++++|+ +++.|+.|++|++.+++. +. .+.+...|++++|+|++.++++++ +.+++|.++
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~----------~~~~~~~l~ 341 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKC----------EIARFYKLH 341 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGT----------EEEEEEEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecc----------eeEEEEEcC
Confidence 99999996 566899999999998874 33 333458899999999998886533 467777764
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.1e-36 Score=293.82 Aligned_cols=287 Identities=19% Similarity=0.253 Sum_probs=240.5
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCC-CCEEEEEeCCCcE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDKTV 91 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~D~~v 91 (314)
...+.+|.+.|.+++|+|++++|++|+.|++|+|||+.+.. ....+.+|...|.+++|+|.+ ..++++|+.|+.|
T Consensus 650 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v 725 (1249)
T 3sfz_A 650 LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK----LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFL 725 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCE
T ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc----eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeE
Confidence 45678999999999999999999999999999999997632 334678999999999999853 4588999999999
Q ss_pred EEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee------------------------
Q 021319 92 RLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR------------------------ 146 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~------------------------ 146 (314)
++||+.++++...... ...+.+++|+|+++.+++++.|+.+++||+++.+.....
T Consensus 726 ~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 805 (1249)
T 3sfz_A 726 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCS 805 (1249)
T ss_dssp EEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCC
T ss_pred EEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEE
Confidence 9999999988776543 455678999999999999999999999999776543221
Q ss_pred --------------------------------ccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccce
Q 021319 147 --------------------------------KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGC 194 (314)
Q Consensus 147 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i 194 (314)
.+...+.+++|+|++..+++++.++.+++|+......+..+.+|...|
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v 885 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWV 885 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCE
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccce
Confidence 122346778899999999999999999999999888888888999999
Q ss_pred EEEEECCCCCEEEEeeCCCeEEEeeCCC----------------------------------------------------
Q 021319 195 YCIAIDPMGRYFAVGSADSLVSLWDISE---------------------------------------------------- 222 (314)
Q Consensus 195 ~~i~~~~~~~~l~t~~~dg~i~vwd~~~---------------------------------------------------- 222 (314)
++++|+|+++++++++.||.|++||+.+
T Consensus 886 ~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 965 (1249)
T 3sfz_A 886 HGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVS 965 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEE
Confidence 9999999999999999999999998532
Q ss_pred ---------------------------cEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccC
Q 021319 223 ---------------------------MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA 275 (314)
Q Consensus 223 ---------------------------~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~ 275 (314)
+..+..+.+|..+|.+++|+|++++|++++.|+.|++|++.+++......+..
T Consensus 966 ~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 1045 (1249)
T 3sfz_A 966 CCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQE 1045 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSS
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCC
Confidence 12223344577789999999999999999999999999999988776666778
Q ss_pred ccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 276 AMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 276 ~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
.|.+++|+|++ .+++++.| |++++|++.
T Consensus 1046 ~v~~~~~~~~~-~l~~~~~d--------g~v~vwd~~ 1073 (1249)
T 3sfz_A 1046 TVKDFRLLQDS-RLLSWSFD--------GTVKVWNVI 1073 (1249)
T ss_dssp CEEEEEECSSS-EEEEEESS--------SEEEEEETT
T ss_pred cEEEEEEcCCC-cEEEEECC--------CcEEEEECC
Confidence 99999999966 45678866 578899874
No 78
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.4e-35 Score=260.52 Aligned_cols=274 Identities=21% Similarity=0.369 Sum_probs=232.8
Q ss_pred ceeeecccccE-EEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 13 SREYTGHKKKV-HSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 13 ~~~~~gH~~~V-~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
.+.+.+|.+.| .++ +++|++|++|+.||+|++||+.+.. ....+.+|...|.++.|++ +++++|+.|++|
T Consensus 111 ~~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i 181 (445)
T 2ovr_B 111 PKVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGHTGGVWSSQMRD---NIIISGSTDRTL 181 (445)
T ss_dssp CEEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCC----EEEECCCCSSCEEEEEEET---TEEEEEETTSCE
T ss_pred eEEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCc----EEEEEcCCCCCEEEEEecC---CEEEEEeCCCeE
Confidence 45688998864 554 4578999999999999999987532 3346789999999999973 589999999999
Q ss_pred EEEeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcC
Q 021319 92 RLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTG 169 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
++||+.++++......+ ..+.++.+ +++.+++++.|+.+.+||+++.+.+.... +...+.++.+ ++..+++++.
T Consensus 182 ~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 182 KVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET
T ss_pred EEEECCcCcEEEEECCCCCcEEEEEe--cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC
Confidence 99999999877766543 34556666 46789999999999999999888776653 4566788877 7889999999
Q ss_pred CceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEE
Q 021319 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIA 249 (314)
Q Consensus 170 ~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 249 (314)
+|.+++|+....+.+..+.+|...+.++++ +++++++++.||.|++||+++++++..+..|...+.++++ ++++|+
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 333 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILV 333 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEE
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEE
Confidence 999999999888888888899999999999 7889999999999999999999999999989888887776 567999
Q ss_pred EecCCceEEEEECCCCCeEEEEe----ccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 250 SASEDLFIDISNVHTGRTVHQIP----CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 250 s~s~d~~v~v~~~~~~~~~~~~~----~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+|+.|+.|++||+.+++.+..+. +...|++++|+ +++|++++.| |+++||+++.
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~d--------g~v~iwd~~~ 391 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDD--------GTVKLWDLKT 391 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETT--------SEEEEEETTT
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCC--------CeEEEEECCC
Confidence 99999999999999999988876 56689999996 5789999977 6888998853
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.7e-36 Score=261.32 Aligned_cols=252 Identities=15% Similarity=0.206 Sum_probs=217.2
Q ss_pred ceeeecccccEEEEEECCC----C---CEEEEeeCCCcEEEeecCCCCCC-ceeeEEeecC-----CCCEEEEEEc----
Q 021319 13 SREYTGHKKKVHSVAWNCT----G---TKLASGSVDQTARVWHIEPHGHG-KVKDIELRGH-----ADSVDQLCWD---- 75 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~----g---~~l~s~~~D~~v~iw~~~~~~~~-~~~~~~~~~h-----~~~v~~l~~~---- 75 (314)
...+.+|...|++++|+|+ + ++|++++.|+.|++|+++..... ......+.+| ...|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 5567799999999999999 9 99999999999999999764321 1113456778 5899999999
Q ss_pred CCCCCE-EEEEeCCCcEEEEeCCC------Cceee-----eEE--------ecCceEEEEEccCCCEEEEEeCCCcEEEE
Q 021319 76 PKHADL-IATASGDKTVRLWDARS------GKCSQ-----QAE--------LSGENINITYKPDGTHIAVGNRDDELTIL 135 (314)
Q Consensus 76 ~~~~~~-l~s~~~D~~v~iwd~~~------~~~~~-----~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~ 135 (314)
|++ .+ |++++.|+.|++||+++ ++... .+. ....+.+++|+|++ .+++++.|+.+.+|
T Consensus 135 ~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 135 RLL-SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCC-ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 875 67 99999999999999987 55443 332 24456789999999 99999999999999
Q ss_pred EccCCeEeeeecc-------CcceeeEEeccCCCeEEEEcCC---ceEEEEeCCCCCceeeeee-------------ccc
Q 021319 136 DVRKFKPIHRRKF-------GYEVNEIAWNMTGEMFFLTTGN---GTVEVLTYPSLRPLDTVVA-------------HTA 192 (314)
Q Consensus 136 d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~-------------~~~ 192 (314)
|+++.+++..... ...+.+++|+|++..+++++.+ +.+++|+....+++..+.. |..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 9999888877664 7789999999999999999999 9999999998888888888 999
Q ss_pred ceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee------ec---------------ccCeEEEEEccCC------
Q 021319 193 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT------KL---------------EWPVRTISFSHTG------ 245 (314)
Q Consensus 193 ~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~------~~---------------~~~v~~~~~sp~~------ 245 (314)
.+.+++|+|++++|++++.||.|++||+.+++++..+. .| ..+|.+++|+|++
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~ 372 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 372 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence 99999999999999999999999999999999999998 77 8899999999998
Q ss_pred ----cEEEEecCCceEEEEECCCCC
Q 021319 246 ----DYIASASEDLFIDISNVHTGR 266 (314)
Q Consensus 246 ----~~l~s~s~d~~v~v~~~~~~~ 266 (314)
++|++++.|+.|++|++.+|+
T Consensus 373 ~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 373 ADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998764
No 80
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.6e-36 Score=257.46 Aligned_cols=240 Identities=16% Similarity=0.246 Sum_probs=202.9
Q ss_pred ccccEEEEEECCC----CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 19 HKKKVHSVAWNCT----GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 19 H~~~V~~v~~s~~----g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
|...|++++|+|+ +.+|++|+.|+.|++||+++.. ....+.+|...|.+++|+|.++++|++++.|+.|++|
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iw 143 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ----CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLW 143 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC----EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce----EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 6678999999999 6799999999999999987532 2345778999999999999556899999999999999
Q ss_pred eCCCCceeeeE----EecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-----------------------
Q 021319 95 DARSGKCSQQA----ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK----------------------- 147 (314)
Q Consensus 95 d~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------------------- 147 (314)
|+++++..... .....+.+++|+|++++|++++.|+.+.+||+++.+......
T Consensus 144 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 144 NIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp ETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred EeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence 99998877665 345667789999999999999999999999998754432221
Q ss_pred ------cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCc--------------eeeeeecccceEEEEECCC--CCE
Q 021319 148 ------FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP--------------LDTVVAHTAGCYCIAIDPM--GRY 205 (314)
Q Consensus 148 ------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--------------~~~~~~~~~~i~~i~~~~~--~~~ 205 (314)
+...+.++.|+ ++.+++++.++.+++|+....+. +..+..|...+++++|+|+ +++
T Consensus 224 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp EEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred cccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 45568888888 78999999999999999876543 5566778889999999999 999
Q ss_pred EEEeeCCCeEEEeeCCCcE----EEEEeeec--ccCeEEEEEccCCcEEEEecCCceEEEEECCC
Q 021319 206 FAVGSADSLVSLWDISEML----CVRTFTKL--EWPVRTISFSHTGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 206 l~t~~~dg~i~vwd~~~~~----~~~~~~~~--~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~ 264 (314)
|++|+.||.|++||+.+++ ....+..| ..+|.+++|+|++++|++++.|+.|++||+.+
T Consensus 302 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 302 LALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999999999998764 34466666 68999999999999999999999999999753
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.2e-35 Score=247.12 Aligned_cols=245 Identities=18% Similarity=0.268 Sum_probs=208.2
Q ss_pred eEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCcee-----eeEE-ecCceEEEEEccCCCEEEEEeCCCcE
Q 021319 59 DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCS-----QQAE-LSGENINITYKPDGTHIAVGNRDDEL 132 (314)
Q Consensus 59 ~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i 132 (314)
...++||.+.|++++|+|+++++|+|||.|++|++||+.+.+.. ..+. ....+.+++|+|++++|++++.|+.+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 34688999999999999987789999999999999998766432 2222 23456789999999999999999999
Q ss_pred EEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCc-eeeeeecccceEEEEECCCC--CEEEE
Q 021319 133 TILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP-LDTVVAHTAGCYCIAIDPMG--RYFAV 208 (314)
Q Consensus 133 ~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~--~~l~t 208 (314)
.+|+........... .........+++.+..+++++.++.+.+|+...... .....+|...+.+++|++++ .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 999998877665543 345667788899999999999999999999865443 33445788899999998865 57899
Q ss_pred eeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCe
Q 021319 209 GSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNL 288 (314)
Q Consensus 209 ~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 288 (314)
++.|+.|++||+.+++++..+.+|..+|.+++|+|++++|++|+.|+.|++||+.+++.+..+.....+.+++|+|++.+
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~ 270 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW 270 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSE
T ss_pred EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999888889999999998866
Q ss_pred eEEEecCCcccccccceEEecccc
Q 021319 289 LAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 289 la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+ +++.| |.++||+++
T Consensus 271 ~-~~~~d--------~~i~iwd~~ 285 (340)
T 4aow_A 271 L-CAATG--------PSIKIWDLE 285 (340)
T ss_dssp E-EEEET--------TEEEEEETT
T ss_pred e-eccCC--------CEEEEEECC
Confidence 5 45555 578888875
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-35 Score=260.18 Aligned_cols=271 Identities=13% Similarity=0.132 Sum_probs=216.5
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCC-ceee---------------------------------------
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG-KVKD--------------------------------------- 59 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~-~~~~--------------------------------------- 59 (314)
..++++++|+|+|++|+++ .++.|++||+.++... ....
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4578999999999966665 5789999998654300 0000
Q ss_pred -------------EEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCC--CCceeeeEE---ecCceEEEEEccCCC
Q 021319 60 -------------IELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR--SGKCSQQAE---LSGENINITYKPDGT 121 (314)
Q Consensus 60 -------------~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~--~~~~~~~~~---~~~~~~~~~~~~~~~ 121 (314)
...++|...|.+++|+|++..++++++.|++|++||+. ++.+...+. ....+.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 01124566899999999865345899999999999998 777766653 345677899999999
Q ss_pred EEEEEeCCCcEEEEEccCCeEee----e-eccCcceeeEEeccC---CCeEEEEcCCceEEEEeCCCCCceee-eeeccc
Q 021319 122 HIAVGNRDDELTILDVRKFKPIH----R-RKFGYEVNEIAWNMT---GEMFFLTTGNGTVEVLTYPSLRPLDT-VVAHTA 192 (314)
Q Consensus 122 ~l~~~~~d~~i~i~d~~~~~~~~----~-~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~ 192 (314)
+|++++.++.+.+|++...+... . ..+...+.+++|+|+ +..+++++.++.+++|++...+.+.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999998765432 2 224567899999999 89999999999999999988877766 558999
Q ss_pred ceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee-------------------------cccCeEEEEEccCCcE
Q 021319 193 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK-------------------------LEWPVRTISFSHTGDY 247 (314)
Q Consensus 193 ~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-------------------------~~~~v~~~~~sp~~~~ 247 (314)
.|++++|+ ++++|++++.|+.|++||+.+++++..+.. ....+.+++|+|++++
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 99999999 999999999999999999999988877753 2356899999999999
Q ss_pred EEEec-CCceEEEEEC--CCC---CeEEEEeccCccceeEEcCCCCeeEEEe
Q 021319 248 IASAS-EDLFIDISNV--HTG---RTVHQIPCRAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 248 l~s~s-~d~~v~v~~~--~~~---~~~~~~~~~~~i~~v~~~~~~~~la~~~ 293 (314)
|++++ .|+.|++|++ .++ +.+..+.....|.+++|+|++ ++++.+
T Consensus 322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~-~~v~~~ 372 (450)
T 2vdu_B 322 VAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDE-FQVTLD 372 (450)
T ss_dssp EEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTE-EEEEEC
T ss_pred EEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCc-EEEEEe
Confidence 99999 8999999999 555 555556656889999999954 444443
No 83
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=253.07 Aligned_cols=247 Identities=17% Similarity=0.300 Sum_probs=207.1
Q ss_pred ecccccEEEEEECCC---CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEE------cCCCCCEEEEEeC
Q 021319 17 TGHKKKVHSVAWNCT---GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW------DPKHADLIATASG 87 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~---g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~------~~~~~~~l~s~~~ 87 (314)
.+|...|++++|+|+ +++|++|+.|+.|++|++.... .....+.+|...|.++.| +|+ +++|++++.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~~~ 137 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE---MPVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTGSR 137 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS---SCSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEEET
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC---ccEEEEEecccceEEEeeccccccCCC-ccEEEEEeC
Confidence 479999999999999 6999999999999999997643 123457799999999966 455 568999999
Q ss_pred CCcEEEEeCCCCc-eeeeEEe-cC----ceEEEE----EccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEe
Q 021319 88 DKTVRLWDARSGK-CSQQAEL-SG----ENINIT----YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAW 157 (314)
Q Consensus 88 D~~v~iwd~~~~~-~~~~~~~-~~----~~~~~~----~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 157 (314)
|+.|++||++++. ....... .. ...++. |+|+++++++++.|+.+.+||+++.+......+...+.++.|
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~ 217 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEF 217 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEc
Confidence 9999999999876 4444322 11 445566 779999999999999999999999988777777788999999
Q ss_pred cc---CCCeEEEEcCCceEEEEeCCCCCceeeee-----ecccceEEEEECCCCC-EEEEeeCCCeEEEeeCCCc-----
Q 021319 158 NM---TGEMFFLTTGNGTVEVLTYPSLRPLDTVV-----AHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISEM----- 223 (314)
Q Consensus 158 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~i~~i~~~~~~~-~l~t~~~dg~i~vwd~~~~----- 223 (314)
+| ++..+++++.+|.+++|+....++...+. +|...+++++|+|+++ ++++++.||.|++||++..
T Consensus 218 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 297 (357)
T 3i2n_A 218 DRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSK 297 (357)
T ss_dssp SCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--
T ss_pred CCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccc
Confidence 99 89999999999999999987666555544 8999999999999998 8999999999999998742
Q ss_pred --------------EEEEEeeecccCeEEEEEccCCcEEE-EecCCceEEEEECCCCCe
Q 021319 224 --------------LCVRTFTKLEWPVRTISFSHTGDYIA-SASEDLFIDISNVHTGRT 267 (314)
Q Consensus 224 --------------~~~~~~~~~~~~v~~~~~sp~~~~l~-s~s~d~~v~v~~~~~~~~ 267 (314)
.++..+..|..+|.+++|+|++++|+ +++.|+.|++|++.+...
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 298 KDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 46777888999999999999999998 899999999999987553
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-36 Score=264.21 Aligned_cols=267 Identities=15% Similarity=0.252 Sum_probs=214.6
Q ss_pred EECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEe-ecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC---Cc--
Q 021319 27 AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL-RGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS---GK-- 100 (314)
Q Consensus 27 ~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~---~~-- 100 (314)
.|+|+++.+++++ .|+... . ....+ .+|.+.|.+++|+|.++.+|++|+.|++|++||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g----~-~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 102 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRG----K-LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY 102 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCC----C-EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC
T ss_pred hcCCccccccccc------cccccc----e-EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc
Confidence 4677888777766 386432 2 23345 789999999999993357999999999999999866 33
Q ss_pred -eeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEcc---CCeEee--------eec-----cCcceeeEE--eccCC
Q 021319 101 -CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVR---KFKPIH--------RRK-----FGYEVNEIA--WNMTG 161 (314)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~--------~~~-----~~~~~~~~~--~~~~~ 161 (314)
+.........+.+++|+|+++.|++++.|+.|++||+. ..+... ... ....+.++. +++++
T Consensus 103 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 103 SSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp SCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC
T ss_pred ceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC
Confidence 23333456678899999999999999999999999985 332221 111 122334444 45678
Q ss_pred CeEEEEcCCceEEEEeCCCCCceeeeee--cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee-ecccCeEE
Q 021319 162 EMFFLTTGNGTVEVLTYPSLRPLDTVVA--HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT-KLEWPVRT 238 (314)
Q Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~ 238 (314)
..+++++.++.+++|+....+.+..+.. |...|++++|+|++++|++|+.||.|++||++.++++..+. .+..+|.+
T Consensus 183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 183 SLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITH 262 (437)
T ss_dssp EEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEE
Confidence 9999999999999999999888888887 88999999999999999999999999999999999988876 67778999
Q ss_pred EEEc----cCCcEEEEecCCceEEEEECCCCCeEEEEe---------------------------ccCccceeEEcCCCC
Q 021319 239 ISFS----HTGDYIASASEDLFIDISNVHTGRTVHQIP---------------------------CRAAMNSVEWNPKYN 287 (314)
Q Consensus 239 ~~~s----p~~~~l~s~s~d~~v~v~~~~~~~~~~~~~---------------------------~~~~i~~v~~~~~~~ 287 (314)
++|+ |++.+|++|+.|+.|++||+.+++.+..+. +...|++++|+ +++
T Consensus 263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp EEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred EEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 9555 568899999999999999999998887765 33458899999 678
Q ss_pred eeEEEecCCcccccccceEEeccccC
Q 021319 288 LLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 288 ~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+|++++.| |.++||++++
T Consensus 342 ~l~s~~~d--------~~i~~wd~~~ 359 (437)
T 3gre_A 342 ILLTDEAT--------SSIVMFSLNE 359 (437)
T ss_dssp EEEEEGGG--------TEEEEEETTC
T ss_pred EEEecCCC--------CeEEEEECCC
Confidence 99999977 6889999853
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.5e-35 Score=275.76 Aligned_cols=284 Identities=19% Similarity=0.260 Sum_probs=234.6
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
.+.+.+|.+.|++++|+|++++|++|+.|+.|++|++.+.. ....+.+|...|.+++|+|++ .+|++++.|++|+
T Consensus 48 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~ 122 (814)
T 3mkq_A 48 VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE----KVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVK 122 (814)
T ss_dssp EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEE
T ss_pred EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----EEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEE
Confidence 45678999999999999999999999999999999987532 334678899999999999985 6899999999999
Q ss_pred EEeCCCC-ceeeeEE-ecCceEEEEEcc-CCCEEEEEeCCCcEEEEEccCCeEeeeecc--CcceeeEEecc--CCCeEE
Q 021319 93 LWDARSG-KCSQQAE-LSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRRKF--GYEVNEIAWNM--TGEMFF 165 (314)
Q Consensus 93 iwd~~~~-~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~ 165 (314)
+||+.++ ....... ....+.+++|+| ++..+++++.|+.|.+||++..++...... ...+..+.|+| ++..++
T Consensus 123 vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 123 LWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp EEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred EEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 9999877 4444443 345567899999 889999999999999999987766554432 36788999999 899999
Q ss_pred EEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCC
Q 021319 166 LTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTG 245 (314)
Q Consensus 166 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~ 245 (314)
+++.+|.+.+|+....+.+..+.+|...+.+++|+|+++++++++.||.|++||+.++..+..+..+..++.+++|+|++
T Consensus 203 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG 282 (814)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTC
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCC
Confidence 99999999999998888888888999999999999999999999999999999999999999998888899999999999
Q ss_pred c--EEEEecCCceEEEEECCCCCeEEEEe--------------------------------------------ccCccce
Q 021319 246 D--YIASASEDLFIDISNVHTGRTVHQIP--------------------------------------------CRAAMNS 279 (314)
Q Consensus 246 ~--~l~s~s~d~~v~v~~~~~~~~~~~~~--------------------------------------------~~~~i~~ 279 (314)
. ++++++ |+.+.+|+...+.....+. +...+.+
T Consensus 283 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (814)
T 3mkq_A 283 RKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQS 361 (814)
T ss_dssp GGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSE
T ss_pred CceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCce
Confidence 7 455555 5557778765432221111 1224789
Q ss_pred eEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 280 VEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 280 v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
++|+|+++++++++ | |.+.||++
T Consensus 362 ~~~spdg~~la~~~-~--------~~~~i~~~ 384 (814)
T 3mkq_A 362 LAHSPNGRFVTVVG-D--------GEYVIYTA 384 (814)
T ss_dssp EEECTTSSEEEEEE-T--------TEEEEEET
T ss_pred eEECCCCCEEEEec-C--------CEEEEEEC
Confidence 99999999999888 4 35566654
No 86
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-34 Score=246.21 Aligned_cols=256 Identities=19% Similarity=0.296 Sum_probs=221.4
Q ss_pred ceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEE
Q 021319 56 KVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTI 134 (314)
Q Consensus 56 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i 134 (314)
......+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++....+. ....+.+++|+|++++|++++.|+.|.+
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKE-GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTT-SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred ccccEEEEEeeceEEEEEEcCC-CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3455678999999999999997 4699999999999999999998877665 3456678999999999999999999999
Q ss_pred EEccCCeEeeeeccCcceeeEEeccCCCeEEEEcCC-----ceEEEEeCCCCC-----------ceeeeeeccc--ceEE
Q 021319 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLR-----------PLDTVVAHTA--GCYC 196 (314)
Q Consensus 135 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~-----------~~~~~~~~~~--~i~~ 196 (314)
||+++.+.+........+.++.|+|++..++++..+ +.+.+|+..... +...+..|.. .+.+
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999999888888888899999999999999999998 999999975433 3334445555 8999
Q ss_pred EEECCCCCEEEEeeCCCeEEEeeCCC-cEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccC
Q 021319 197 IAIDPMGRYFAVGSADSLVSLWDISE-MLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA 275 (314)
Q Consensus 197 i~~~~~~~~l~t~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~ 275 (314)
++|+|++++|++++.||.|++||+.+ ...+..+..|..+|.+++|+|++++|++++.|+.|++||+.+++.+..+.+..
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 260 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDC 260 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCC
Confidence 99999999999999999999999998 78888888899999999999999999999999999999999999999988888
Q ss_pred ccceeEEcCCCCeeEEEecCCcccccc------cceEEecccc
Q 021319 276 AMNSVEWNPKYNLLAYAGDDKNKYQAD------EGVFRIYGFE 312 (314)
Q Consensus 276 ~i~~v~~~~~~~~la~~~~d~~~~~~~------~~~~~~~~~~ 312 (314)
.+.+++|+|++.++++++.++....+. ...+++|+++
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 999999999999999999876432211 1168888874
No 87
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.7e-36 Score=256.39 Aligned_cols=248 Identities=13% Similarity=0.180 Sum_probs=194.3
Q ss_pred eeeecccccEEEEEECCCCCEEEEe-----------eCCCcEEEeecCCCCCCceeeE------EeecCCCCEEEEEEcC
Q 021319 14 REYTGHKKKVHSVAWNCTGTKLASG-----------SVDQTARVWHIEPHGHGKVKDI------ELRGHADSVDQLCWDP 76 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l~s~-----------~~D~~v~iw~~~~~~~~~~~~~------~~~~h~~~v~~l~~~~ 76 (314)
..+.+|...|.+++++ ++.+++| +.|+.+|+|+++..... .... ....+...+..++|+|
T Consensus 67 ~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~fSp 143 (365)
T 4h5i_A 67 FALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQ-LEFLTSVDFDASTNADDYTKLVYISR 143 (365)
T ss_dssp EECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTE-EEEEEEECSSCCCCTTCCEEEEEECT
T ss_pred EEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCce-EEEeeeeceeecCCcccCEEEEEEcC
Confidence 4567888889888764 4555554 56888999998654321 1111 1223455688999999
Q ss_pred CCCCE-EEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee---ccCcce
Q 021319 77 KHADL-IATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR---KFGYEV 152 (314)
Q Consensus 77 ~~~~~-l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~ 152 (314)
++..+ +++++.|++|+|||+.++++.........+..++|+|+|+++++++. +.+.+|+..+.+.+... .+...+
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEE
T ss_pred CCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCE
Confidence 86533 24556799999999999998888877778889999999999999885 45667776665544332 245678
Q ss_pred eeEEeccCCCeEEEEcCCc----eEEEEeCCCCCc----eeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE
Q 021319 153 NEIAWNMTGEMFFLTTGNG----TVEVLTYPSLRP----LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (314)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~----~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~ 224 (314)
..++|+|++..+++++.++ .+..|+...... ...+.+|...|++++|+|+|++||+|+.|++|++||+.+++
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc
Confidence 9999999999999987766 567777654332 33456788899999999999999999999999999999999
Q ss_pred EEEEe-eecccCeEEEEEccCCcEEEEecCCceEEEEECCCC
Q 021319 225 CVRTF-TKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTG 265 (314)
Q Consensus 225 ~~~~~-~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~ 265 (314)
+++++ .+|..+|.+++|||||++|||||.|+.|+||++...
T Consensus 303 ~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 303 MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99875 679999999999999999999999999999998653
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-35 Score=278.94 Aligned_cols=250 Identities=22% Similarity=0.337 Sum_probs=200.3
Q ss_pred eeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCC-CCEEEEEeCCCcEE
Q 021319 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDKTVR 92 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~D~~v~ 92 (314)
..+.||.+.|++++|+|++++|++|+.||+|+||++.... ......+.+|.++|.+++|+|.. +++|++|+.||+|+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~--~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE--EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC--CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 5678999999999999999999999999999999986421 23344678999999999998762 57999999999999
Q ss_pred EEeCCCCce--eeeEE-ecCceEEEEEccC--CCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEE
Q 021319 93 LWDARSGKC--SQQAE-LSGENINITYKPD--GTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT 167 (314)
Q Consensus 93 iwd~~~~~~--~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
+||+.+++. ..... ....+.+++|+|+ ++.+++++.|+.|++||++.....
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~------------------------ 136 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT------------------------ 136 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC------------------------
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc------------------------
Confidence 999998863 22222 3455678899998 899999999999999998764211
Q ss_pred cCCceEEEEeCCCCCceeeeeecccceEEEEECC-------------CCCEEEEeeCCCeEEEeeCCCc----EEEEEee
Q 021319 168 TGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDP-------------MGRYFAVGSADSLVSLWDISEM----LCVRTFT 230 (314)
Q Consensus 168 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-------------~~~~l~t~~~dg~i~vwd~~~~----~~~~~~~ 230 (314)
....+.+|...+.+++|+| +++++++|+.||.|++||+++. .+...+.
T Consensus 137 ---------------~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~ 201 (753)
T 3jro_A 137 ---------------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 201 (753)
T ss_dssp ---------------CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred ---------------ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec
Confidence 1112345777888888888 5899999999999999999765 5667788
Q ss_pred ecccCeEEEEEccC---CcEEEEecCCceEEEEECCCCCeE------EEEeccCccceeEEcCCCCeeEEEecCCccccc
Q 021319 231 KLEWPVRTISFSHT---GDYIASASEDLFIDISNVHTGRTV------HQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQA 301 (314)
Q Consensus 231 ~~~~~v~~~~~sp~---~~~l~s~s~d~~v~v~~~~~~~~~------~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~ 301 (314)
+|..+|.+++|+|+ +++|++++.|+.|++||+.++... ....+...|++++|+|++.+|++++.|
T Consensus 202 ~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D------ 275 (753)
T 3jro_A 202 GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD------ 275 (753)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS------
T ss_pred CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC------
Confidence 89999999999999 999999999999999999886421 112246689999999999999999977
Q ss_pred ccceEEecccc
Q 021319 302 DEGVFRIYGFE 312 (314)
Q Consensus 302 ~~~~~~~~~~~ 312 (314)
|.++||+++
T Consensus 276 --g~I~vwd~~ 284 (753)
T 3jro_A 276 --NKVTLWKEN 284 (753)
T ss_dssp --SCEECCBCC
T ss_pred --CEEEEEecC
Confidence 578888875
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-34 Score=249.40 Aligned_cols=246 Identities=20% Similarity=0.291 Sum_probs=203.1
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~ 97 (314)
.|...|++++|+|++++|++|+.||.|++|+++... ....+.+|...|.+++|++ +++++++.|+.|++||++
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT----KLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe----EEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecc
Confidence 388999999999999999999999999999987532 3345679999999999953 589999999999999998
Q ss_pred C-CceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee-ccCcceeeEEeccCCCeEEEEc---CCc
Q 021319 98 S-GKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLTT---GNG 171 (314)
Q Consensus 98 ~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~g 171 (314)
. +....... ....+.+++|+|++++|++++.|+.|++||+++.+++... .+...+.+++|+|++..+++.+ .++
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4 44444433 3456678999999999999999999999999988877665 3567799999999876555543 599
Q ss_pred eEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEE--eeCCCeEEEeeCCCcEEE--EEeeecccCeEEEEEccCCcE
Q 021319 172 TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAV--GSADSLVSLWDISEMLCV--RTFTKLEWPVRTISFSHTGDY 247 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t--~~~dg~i~vwd~~~~~~~--~~~~~~~~~v~~~~~sp~~~~ 247 (314)
.+++|+....+++..+. +...+.+++|+|+++++++ |+.||.|++||+.++... ..+.+|...|.+++|+|++++
T Consensus 285 ~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~ 363 (401)
T 4aez_A 285 QIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRI 363 (401)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSE
T ss_pred EEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCE
Confidence 99999998888776664 6678999999999999998 558999999999886544 346688899999999999999
Q ss_pred EEEecCCceEEEEECCCCCeEEEE
Q 021319 248 IASASEDLFIDISNVHTGRTVHQI 271 (314)
Q Consensus 248 l~s~s~d~~v~v~~~~~~~~~~~~ 271 (314)
|++++.|+.|++|++.+++.+...
T Consensus 364 l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 364 LSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEECTTSEEEEEECCC-------
T ss_pred EEEEeCCCcEEEEECCCCcccccc
Confidence 999999999999999998876553
No 90
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-34 Score=268.49 Aligned_cols=245 Identities=19% Similarity=0.280 Sum_probs=210.4
Q ss_pred EEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc-----eeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEE
Q 021319 60 IELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK-----CSQQAE-LSGENINITYKPDGTHIAVGNRDDELT 133 (314)
Q Consensus 60 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~ 133 (314)
..+.+|.+.|.+++|+|++.++|+||+.|++|++||+.+.. ...... +...+.+++|+|++++|++++.|+.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 35789999999999999877899999999999999987643 222332 334567899999999999999999999
Q ss_pred EEEccCCeEeeee-ccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceee---eeecccceEEEEECCCC--CEEE
Q 021319 134 ILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDT---VVAHTAGCYCIAIDPMG--RYFA 207 (314)
Q Consensus 134 i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~i~~i~~~~~~--~~l~ 207 (314)
+||+.+.+.+... .+...+.+++|+|++..+++++.|+.+++|+......... ..+|...+.+++|+|++ ..++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 9999998877664 4567899999999999999999999999999754332221 23688889999999987 5899
Q ss_pred EeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCC
Q 021319 208 VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYN 287 (314)
Q Consensus 208 t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 287 (314)
+++.|+.|++||+++.++...+.+|...|.+++|+|++++|+||+.|+.|++||+.+++.+..+.....|++++|+|++.
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~ 615 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRY 615 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSS
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999888887778899999999998
Q ss_pred eeEEEecCCcccccccceEEeccccC
Q 021319 288 LLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 288 ~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+|++++++ .++||+++.
T Consensus 616 ~l~~~~~~---------~i~iwd~~~ 632 (694)
T 3dm0_A 616 WLCAATEH---------GIKIWDLES 632 (694)
T ss_dssp EEEEEETT---------EEEEEETTT
T ss_pred EEEEEcCC---------CEEEEECCC
Confidence 88776533 488998853
No 91
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-35 Score=263.95 Aligned_cols=248 Identities=9% Similarity=0.097 Sum_probs=196.0
Q ss_pred eeecccccEEEEEECCC------CCEEEEeeCCCcEEEeecCCCCCC-------ceeeEEeecCCCCEEEEEEcCCCCCE
Q 021319 15 EYTGHKKKVHSVAWNCT------GTKLASGSVDQTARVWHIEPHGHG-------KVKDIELRGHADSVDQLCWDPKHADL 81 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~------g~~l~s~~~D~~v~iw~~~~~~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~ 81 (314)
.+.+|.+.|.+|+|+|+ +.+||||+.||+|+|||+...... ......+.+|...|.+++|++. ..
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~ 279 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TT 279 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--Ce
Confidence 35678899999999997 579999999999999999754211 0112357789999999999974 48
Q ss_pred EEEEeCCCcEEEEeCCCCcee-eeEEe-cCceEEE--EEccCC-CEEEEEeCCCcEEEEEccCCeEeeeecc---Cccee
Q 021319 82 IATASGDKTVRLWDARSGKCS-QQAEL-SGENINI--TYKPDG-THIAVGNRDDELTILDVRKFKPIHRRKF---GYEVN 153 (314)
Q Consensus 82 l~s~~~D~~v~iwd~~~~~~~-~~~~~-~~~~~~~--~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~~ 153 (314)
|++|+.||+|++||++++... ..... ...+.++ .|+|++ .+|++++.|+++++||+++.+....... ...+.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 999999999999999876432 22333 3455666 567887 8999999999999999987654433221 12467
Q ss_pred eEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCc----------
Q 021319 154 EIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM---------- 223 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~---------- 223 (314)
+++|+|++..+++++.++.+++|+......+..+.+|...|++++|+|++++|++|+.||+|++||+...
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~ 439 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSA 439 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC-----
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCcc
Confidence 8999999999999999999999999888877788899999999999999999999999999999985321
Q ss_pred ----------------------------------EEEEEeeecccCeEEEEEccCCc---EEEEecCCceEEEEECCC
Q 021319 224 ----------------------------------LCVRTFTKLEWPVRTISFSHTGD---YIASASEDLFIDISNVHT 264 (314)
Q Consensus 224 ----------------------------------~~~~~~~~~~~~v~~~~~sp~~~---~l~s~s~d~~v~v~~~~~ 264 (314)
.++.++.+|..+|.+++|+|++. ++|+|+.||.|+||++.-
T Consensus 440 ~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 440 TQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp -CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 11122334666889999999964 999999999999999753
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-34 Score=241.04 Aligned_cols=251 Identities=17% Similarity=0.204 Sum_probs=210.1
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
...+.+|...|.+++|+|++++|++|+.|+.|++|++...... .....+.+|...|.+++|+ ++++++++.|+.|+
T Consensus 52 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~ 127 (313)
T 3odt_A 52 GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGE-DPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAK 127 (313)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTS-CC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEE
T ss_pred EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCC-CcccchhhcccCEEEEEec---CCEEEEEeCCCCEE
Confidence 3456789999999999999999999999999999998754322 2234578899999999994 46899999999999
Q ss_pred EEeCCCCceeeeEE-ecCceEEEEEcc-CCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEEcCC
Q 021319 93 LWDARSGKCSQQAE-LSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN 170 (314)
Q Consensus 93 iwd~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
+|| .+....... .......+.+.| +++.+++++.|+.+.+||...........+...+.+++|++++. +++++.+
T Consensus 128 ~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d 204 (313)
T 3odt_A 128 VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSND 204 (313)
T ss_dssp EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETT
T ss_pred EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCC
Confidence 999 445444443 345566788887 99999999999999999954433333333667899999999998 8899999
Q ss_pred ceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEE
Q 021319 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 250 (314)
Q Consensus 171 g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 250 (314)
+.+++|+....+++..+..|...+++++|+|++ .+++++.||.|++||+.+++.+..+..+..++.+++|+|+++ +++
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 282 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIV 282 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEE
T ss_pred CeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEE
Confidence 999999999988888899999999999999999 588999999999999999999999999999999999999999 567
Q ss_pred ecCCceEEEEECCCCCeEEEEe
Q 021319 251 ASEDLFIDISNVHTGRTVHQIP 272 (314)
Q Consensus 251 ~s~d~~v~v~~~~~~~~~~~~~ 272 (314)
++.|+.|++|++.+++.+....
T Consensus 283 ~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 283 GSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp EETTSCEEEEESCGGGCCC---
T ss_pred EeCCCcEEEEeCCCCceeehhh
Confidence 9999999999999887665543
No 93
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=261.81 Aligned_cols=258 Identities=7% Similarity=0.030 Sum_probs=206.2
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
...|.+|+|||||+++||++.|++|+ |.... ..+.+|...|..++|+|++ .++.+++|+....
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~-------~~l~gh~~~v~~V~FsPdg--------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYA-------KDINCNSKNLFHVKEFPLE--------FENKLDFELAQQN 77 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCC-------SCCSSBGGGTEEEEEECCC--------CCCTTTTSCCCSS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccc-------ceecCCCccEEEEEECCCC--------CcceEEEEeCCCc
Confidence 57899999999999999999999999 64321 1346999999999999975 5566666654322
Q ss_pred ceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccC-----cceeeEEeccCCCeEEEEcCCceEE
Q 021319 100 KCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG-----YEVNEIAWNMTGEMFFLTTGNGTVE 174 (314)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~ 174 (314)
. .........+..++|+|+|+.|++++.|+.+.+||... .+....+. ..+.+++|+|+|+.+++++.+|+++
T Consensus 78 ~-~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 78 G-LLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp C-SSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred e-EeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 2 22212256678899999999999999999999999544 33333322 2589999999999999999999999
Q ss_pred EEeCCCCCc-------eeee----eecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEE---EEEee-ecccCeEEE
Q 021319 175 VLTYPSLRP-------LDTV----VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC---VRTFT-KLEWPVRTI 239 (314)
Q Consensus 175 ~~~~~~~~~-------~~~~----~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~---~~~~~-~~~~~v~~~ 239 (314)
+|+...... +.++ .+|...|.+++|+|+| +++++.|++|++||+..... .+++. .|...|.++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 999877542 4554 5677899999999999 78889999999999987663 34563 677889999
Q ss_pred EEccCCcEEEEecCCceEEEEECCCCCe-EEEEeccCccceeEE--cCCCCeeEEEecCCcccccccceEEeccc
Q 021319 240 SFSHTGDYIASASEDLFIDISNVHTGRT-VHQIPCRAAMNSVEW--NPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 240 ~~sp~~~~l~s~s~d~~v~v~~~~~~~~-~~~~~~~~~i~~v~~--~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
+|+ |++||+++ |+.|++||..+++. .....|...+++|+| +|++..|+++++| |+ |+|-+
T Consensus 233 aFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ed--------G~-klw~~ 295 (588)
T 2j04_A 233 KIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKT--------SY-KVLLE 295 (588)
T ss_dssp EEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSC--------EE-EEEES
T ss_pred EEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCC--------CC-EEEee
Confidence 999 69999998 69999999998777 444467789999999 9999999999977 56 66655
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=247.47 Aligned_cols=238 Identities=15% Similarity=0.222 Sum_probs=207.2
Q ss_pred ccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 021319 19 HKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (314)
Q Consensus 19 H~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~ 98 (314)
|.+.|++++|+|++++|++|+.|+.|++|+... .....+.+|...|.+++|+|++ .+|++++.|+.|++||+.+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG-----ALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVIS 180 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETTS-----CEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTT
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----CeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCC
Confidence 788999999999999999999999999999431 2334677899999999999974 6899999999999999987
Q ss_pred CceeeeEE---------------------------------------------------------ecCceEEEEEccCCC
Q 021319 99 GKCSQQAE---------------------------------------------------------LSGENINITYKPDGT 121 (314)
Q Consensus 99 ~~~~~~~~---------------------------------------------------------~~~~~~~~~~~~~~~ 121 (314)
++...... ....+..++|+|+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 260 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK 260 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC
Confidence 76543221 122345688999999
Q ss_pred EEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEEC
Q 021319 122 HIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAID 200 (314)
Q Consensus 122 ~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~ 200 (314)
+|++++.|+.+.+||++..+.+.... +...+.++.|+|++ .+++++.++.+++|+....+.+..+..|...+.+++|+
T Consensus 261 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 261 LLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp EEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred EEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEc
Confidence 99999999999999999877666654 56789999999999 99999999999999999888888888899999999999
Q ss_pred CCCCEEEEeeCCCeEEEeeCCCcE--------------------EEEEeeeccc--CeEEEEEccCCcEEEEecCCceEE
Q 021319 201 PMGRYFAVGSADSLVSLWDISEML--------------------CVRTFTKLEW--PVRTISFSHTGDYIASASEDLFID 258 (314)
Q Consensus 201 ~~~~~l~t~~~dg~i~vwd~~~~~--------------------~~~~~~~~~~--~v~~~~~sp~~~~l~s~s~d~~v~ 258 (314)
|++++|++++.||.|++||+.+.. .+..+..+.. +|.+++|+|++++|++++.|+.|+
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 419 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGS 419 (425)
T ss_dssp TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCE
T ss_pred CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEE
Confidence 999999999999999999998877 7888888866 999999999999999999999999
Q ss_pred EEECC
Q 021319 259 ISNVH 263 (314)
Q Consensus 259 v~~~~ 263 (314)
+|++.
T Consensus 420 iw~~~ 424 (425)
T 1r5m_A 420 VVAIP 424 (425)
T ss_dssp EEECC
T ss_pred EEeec
Confidence 99974
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.9e-34 Score=247.78 Aligned_cols=240 Identities=14% Similarity=0.134 Sum_probs=197.3
Q ss_pred ecccccEEEEEECC-CCCEEEEeeCCCcEEEeecCCCCCCceee-EEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 17 TGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKD-IELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 17 ~gH~~~V~~v~~s~-~g~~l~s~~~D~~v~iw~~~~~~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
.+|.+.|.+++|+| ++++|++++.|+.|++||+... .... ....+|...|.+++|+|++ .+|++++.|+.|++|
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~ 190 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS---VIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLL 190 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC---EEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC---ceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEE
Confidence 47999999999999 6899999999999999999741 1111 1223455889999999975 699999999999999
Q ss_pred eCCCCceeeeEE-ecCceEEEEEccCCC-EEEEEeCCCcEEEEEccC----CeEeeeeccCcceeeEEecc-CCCeEEEE
Q 021319 95 DARSGKCSQQAE-LSGENINITYKPDGT-HIAVGNRDDELTILDVRK----FKPIHRRKFGYEVNEIAWNM-TGEMFFLT 167 (314)
Q Consensus 95 d~~~~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 167 (314)
|++ ++...... ....+.+++|+|+++ ++++++.|+.|++||+++ ...+....+...+.+++|+| ++..++++
T Consensus 191 d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 191 GLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp ETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEE
T ss_pred ECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEE
Confidence 995 55554444 345677899999999 999999999999999987 55566666778899999999 99999999
Q ss_pred cCCceEEEEeCCCCCceeeeeecc-----------------cceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee
Q 021319 168 TGNGTVEVLTYPSLRPLDTVVAHT-----------------AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (314)
Q Consensus 168 ~~~g~~~~~~~~~~~~~~~~~~~~-----------------~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~ 230 (314)
+.++.+++|++...+....+..|. ..+..++++|++++ +++.|+.|++||+.+++++..+.
T Consensus 270 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~ 347 (383)
T 3ei3_B 270 DQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLR 347 (383)
T ss_dssp ESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEEC
T ss_pred cCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeec
Confidence 999999999998777666665543 23445667777766 77899999999999999998887
Q ss_pred e--cccCeEEEEEccCCcEEEEecCCceEEEEECCC
Q 021319 231 K--LEWPVRTISFSHTGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 231 ~--~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~ 264 (314)
. +...+..++|+|++++|++|+ |+.|++||+.+
T Consensus 348 ~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 348 DPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp BTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 6 456678889999999999997 99999999864
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.2e-33 Score=246.70 Aligned_cols=283 Identities=12% Similarity=0.141 Sum_probs=232.5
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeE-EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
..+.+++|+|++.++++++.|+.|++||+++......... .+.+|...|.+++|+|+ +.++++++.|+.|++||+.++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH-NELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG-TEEEEEEGGGTEEEEEETTTC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC-CEEEEEECCCCEEEEEECCCc
Confidence 4466999999888888899999999999875321110000 34578999999999876 468999999999999999998
Q ss_pred ceeeeEEe-cCceEEEEEccCCCEEEEEe-CCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEEc--------C
Q 021319 100 KCSQQAEL-SGENINITYKPDGTHIAVGN-RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT--------G 169 (314)
Q Consensus 100 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 169 (314)
+....... ......++|+|+++.+++++ .++.|.+||+++.+.+........+..++|+|+++.++++. .
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccC
Confidence 87776654 34567899999999886554 78999999999988887777777789999999999888887 5
Q ss_pred CceEEEEeCCCCCceeeeeecccceEEEEECCCCCE-EEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEE
Q 021319 170 NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRY-FAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYI 248 (314)
Q Consensus 170 ~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 248 (314)
++.+++|+....+.+..+ .|...+.+++|+|+++. +++++.++.|++||+.+++.+..+. +...+.+++|+|++++|
T Consensus 282 dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l 359 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYL 359 (433)
T ss_dssp CEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEE
T ss_pred CCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEE
Confidence 889999999876655443 56668899999999975 5677899999999999998887775 56679999999999999
Q ss_pred EEecC---------------CceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 249 ASASE---------------DLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 249 ~s~s~---------------d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
++++. ||.|++||..+++.+..+.....+.+++|+|++++|++++.+ +|.++||+++.
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------d~~i~v~~~~~ 432 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFL-------DHQIRVYRRDG 432 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETT-------TTEEEEEEETT
T ss_pred EEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECC-------CCeEEEEEecC
Confidence 88876 579999999999998888877789999999999999888752 36899999864
No 97
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-34 Score=246.76 Aligned_cols=243 Identities=21% Similarity=0.313 Sum_probs=202.5
Q ss_pred EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC--ceeeeEE-ecCceEEEEEccC--CCEEEEEeCCCcEEEE
Q 021319 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG--KCSQQAE-LSGENINITYKPD--GTHIAVGNRDDELTIL 135 (314)
Q Consensus 61 ~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~--~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~d~~i~i~ 135 (314)
.+.+|.+.|.+++|+|++ ++|++|+.|+.|++||+..+ +....+. ....+.+++|+++ +++|++++.|+.|++|
T Consensus 6 ~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 468999999999999974 69999999999999999743 3333333 3455678999877 9999999999999999
Q ss_pred EccCCe--Eeeee-ccCcceeeEEeccC--CCeEEEEcCCceEEEEeCCCCC--ceeeeeecccceEEEEECC-------
Q 021319 136 DVRKFK--PIHRR-KFGYEVNEIAWNMT--GEMFFLTTGNGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDP------- 201 (314)
Q Consensus 136 d~~~~~--~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~i~~i~~~~------- 201 (314)
|+++.+ .+... .+...+.+++|+|+ +..+++++.++.+++|++.... ....+..|...+++++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 999876 33333 35678999999999 9999999999999999997663 3345668899999999999
Q ss_pred ------CCCEEEEeeCCCeEEEeeCCCc----EEEEEeeecccCeEEEEEccC---CcEEEEecCCceEEEEECCCCCeE
Q 021319 202 ------MGRYFAVGSADSLVSLWDISEM----LCVRTFTKLEWPVRTISFSHT---GDYIASASEDLFIDISNVHTGRTV 268 (314)
Q Consensus 202 ------~~~~l~t~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~sp~---~~~l~s~s~d~~v~v~~~~~~~~~ 268 (314)
+++++++++.||.|++||++.. .++..+..|..+|.+++|+|+ +++|++++.|+.|++||+.++...
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 244 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 244 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence 6999999999999999998754 355677789999999999999 899999999999999999886422
Q ss_pred ---EEEe---ccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 269 ---HQIP---CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 269 ---~~~~---~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
.... +...|++++|+|++.+|++++.| |.++||+++
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d--------g~i~iw~~~ 286 (379)
T 3jrp_A 245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD--------NKVTLWKEN 286 (379)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEESS--------SSEEEEEEE
T ss_pred ceeeeeccccCCCcEEEEEEcCCCCEEEEecCC--------CcEEEEeCC
Confidence 2211 45679999999999999999977 567888874
No 98
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-35 Score=249.02 Aligned_cols=259 Identities=10% Similarity=0.065 Sum_probs=202.2
Q ss_pred EECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCC---------
Q 021319 27 AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR--------- 97 (314)
Q Consensus 27 ~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~--------- 97 (314)
.+.+++++|+||+.||+|++||++... ... .+. ...|.++.++|. +++++.|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~--~~~--~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSK--TIT--TIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSS--CEE--EEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETT
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCc--EEE--EEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecC
Confidence 455788999999999999999997643 222 222 456777788875 8899999999999765
Q ss_pred CCceeeeEEe--cCceEEEEEcc--CCCEEEEEeCCCcEEEEEccCCeEeeee--ccCcceeeEEeccCCCeEEEEcCCc
Q 021319 98 SGKCSQQAEL--SGENINITYKP--DGTHIAVGNRDDELTILDVRKFKPIHRR--KFGYEVNEIAWNMTGEMFFLTTGNG 171 (314)
Q Consensus 98 ~~~~~~~~~~--~~~~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g 171 (314)
+++....... ...+.+++++| +++++++++.|+.+++||+++.+..... .....+.+++|+|++..+++++.+|
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 3443333332 25578899999 9999999999999999999988775543 3344689999999999999999999
Q ss_pred eEEEEeCCCCCce-eeeee-cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee---cccCeE--EEEEccC
Q 021319 172 TVEVLTYPSLRPL-DTVVA-HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK---LEWPVR--TISFSHT 244 (314)
Q Consensus 172 ~~~~~~~~~~~~~-~~~~~-~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~---~~~~v~--~~~~sp~ 244 (314)
.+++|+....+.+ ..+.. |...|++++|+|++.+|++++ |+.|++||+++..++..+.. +..++. +++|+|+
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 9999999888776 67777 999999999999999999999 55999999998765544433 333444 6999999
Q ss_pred CcEEEEecC-CceEEEEECCCCCeEEEEeccCccceeEEcC---CCCeeEEEecCCccc
Q 021319 245 GDYIASASE-DLFIDISNVHTGRTVHQIPCRAAMNSVEWNP---KYNLLAYAGDDKNKY 299 (314)
Q Consensus 245 ~~~l~s~s~-d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~---~~~~la~~~~d~~~~ 299 (314)
+++|++++. |+.+++|++.+....... .++..++|+| +...+++++.|+...
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~ 327 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIA 327 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEE
T ss_pred CCEEEEecCCCCcEEEEEEcccccceEe---cCceeEecCccccccceeEEEecCCceE
Confidence 999999998 999999999776554443 5688899999 888999999886544
No 99
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.2e-33 Score=245.16 Aligned_cols=248 Identities=19% Similarity=0.289 Sum_probs=203.3
Q ss_pred eeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
.+.+|...|++|+|+|+|++|++|+.|++|+|||++.. .....+.+|...+.++++++ .++++|+.|+.+++|
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~----~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ----KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHH 214 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEE
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC----cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEe
Confidence 34578889999999999999999999999999999753 23346789999999999864 589999999999999
Q ss_pred eCCCCcee-eeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEe-----eeeccCcceeeEEeccCCCeEE-E
Q 021319 95 DARSGKCS-QQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPI-----HRRKFGYEVNEIAWNMTGEMFF-L 166 (314)
Q Consensus 95 d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~ 166 (314)
|....... .... .......+.+.|+++.+++++.|+.+.+||....+.. ....+...+..++|+|.+..++ +
T Consensus 215 d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~ 294 (420)
T 4gga_A 215 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 294 (420)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEE
T ss_pred eecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEE
Confidence 98765432 3333 3445667889999999999999999999998765421 2233456788999999876554 3
Q ss_pred --EcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEee--CCCeEEEeeCCCcEEEEEeeecccCeEEEEEc
Q 021319 167 --TTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGS--ADSLVSLWDISEMLCVRTFTKLEWPVRTISFS 242 (314)
Q Consensus 167 --~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~s 242 (314)
++.|+.+++|+....+....+..| ..+.++.|+|+++.+++++ .|+.|++||+.+++++.++.+|..+|.+++|+
T Consensus 295 ~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~s 373 (420)
T 4gga_A 295 GGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS 373 (420)
T ss_dssp EECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 346899999999888777666544 5688999999999887654 78999999999999999999999999999999
Q ss_pred cCCcEEEEecCCceEEEEECCCCCeEEE
Q 021319 243 HTGDYIASASEDLFIDISNVHTGRTVHQ 270 (314)
Q Consensus 243 p~~~~l~s~s~d~~v~v~~~~~~~~~~~ 270 (314)
|+|++|||||.|+.|++||+.+..+.+.
T Consensus 374 pdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 374 PDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp TTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred CCCCEEEEEecCCeEEEEECCCCCccch
Confidence 9999999999999999999977655443
No 100
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.7e-33 Score=239.22 Aligned_cols=244 Identities=17% Similarity=0.217 Sum_probs=202.3
Q ss_pred EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc----eeeeEE-ecCceEEEEEcc--CCCEEEEEeCCCcEE
Q 021319 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK----CSQQAE-LSGENINITYKP--DGTHIAVGNRDDELT 133 (314)
Q Consensus 61 ~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~----~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~d~~i~ 133 (314)
.+.+|.+.|.+++|+|+ +.+|++++.|+.|++||+.++. ....+. ....+.+++|+| ++++|++++.|+.|+
T Consensus 6 ~~~gH~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFY-GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSS-SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCC-CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 46799999999999997 4699999999999999998763 333332 345677899999 699999999999999
Q ss_pred EEEccCC---------eEeeee-ccCcceeeEEeccC--CCeEEEEcCCceEEEEeCCCCCceeeee-------------
Q 021319 134 ILDVRKF---------KPIHRR-KFGYEVNEIAWNMT--GEMFFLTTGNGTVEVLTYPSLRPLDTVV------------- 188 (314)
Q Consensus 134 i~d~~~~---------~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~------------- 188 (314)
+||++.. +++... .+...+.+++|+|+ +..+++++.++.+++|++...+.+..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999875 334333 34567999999999 9999999999999999987766544332
Q ss_pred ecccceEEEEECCC---CCEEEEeeCCCeEEEeeCCCcEE--EEEeeecccCeEEEEEccCC----cEEEEecCCceEEE
Q 021319 189 AHTAGCYCIAIDPM---GRYFAVGSADSLVSLWDISEMLC--VRTFTKLEWPVRTISFSHTG----DYIASASEDLFIDI 259 (314)
Q Consensus 189 ~~~~~i~~i~~~~~---~~~l~t~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~sp~~----~~l~s~s~d~~v~v 259 (314)
.|...+.+++|+|+ +.++++++.++.+.+|+...... +..+..|..+|.+++|+|++ ++|++++.|+.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 57778999999997 89999999999998888876654 67778899999999999998 89999999999999
Q ss_pred EECCCC----------------------------------------------CeEEEEe-ccCccceeEEcCCCCeeEEE
Q 021319 260 SNVHTG----------------------------------------------RTVHQIP-CRAAMNSVEWNPKYNLLAYA 292 (314)
Q Consensus 260 ~~~~~~----------------------------------------------~~~~~~~-~~~~i~~v~~~~~~~~la~~ 292 (314)
||+.++ +.+..+. +...|++++|+|++++|+++
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 999764 3333333 46789999999999999999
Q ss_pred ecCCcccccccceEEeccccC
Q 021319 293 GDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 293 ~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+.| |.++||+++.
T Consensus 325 ~~d--------g~v~iw~~~~ 337 (351)
T 3f3f_A 325 GDD--------GKVRLWKATY 337 (351)
T ss_dssp ETT--------SCEEEEEECT
T ss_pred cCC--------CcEEEEecCc
Confidence 987 5788998853
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-33 Score=248.48 Aligned_cols=283 Identities=18% Similarity=0.317 Sum_probs=222.5
Q ss_pred cEEEEEECCCC----------CEEEEeeC----CCcEEEeecCC-----------------------CCCCceeeEEeec
Q 021319 22 KVHSVAWNCTG----------TKLASGSV----DQTARVWHIEP-----------------------HGHGKVKDIELRG 64 (314)
Q Consensus 22 ~V~~v~~s~~g----------~~l~s~~~----D~~v~iw~~~~-----------------------~~~~~~~~~~~~~ 64 (314)
+..+++|.|+. .+++.|.. ...|.+.+++. ...+........+
T Consensus 47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 126 (430)
T 2xyi_A 47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN 126 (430)
T ss_dssp CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence 56888888875 45777654 35677775430 0011233345678
Q ss_pred CCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC----------CceeeeEE-ecCceEEEEEccCCC-EEEEEeCCCcE
Q 021319 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARS----------GKCSQQAE-LSGENINITYKPDGT-HIAVGNRDDEL 132 (314)
Q Consensus 65 h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~----------~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~d~~i 132 (314)
|.+.|.+++|+|+++.+|++++.||.|++||+.+ ......+. ....+.+++|+|++. +|++++.|+.|
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCE
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeE
Confidence 9999999999997667999999999999999875 23333333 334556799999998 99999999999
Q ss_pred EEEEccCCeE-------eeee-ccCcceeeEEecc-CCCeEEEEcCCceEEEEeCCCC---CceeeeeecccceEEEEEC
Q 021319 133 TILDVRKFKP-------IHRR-KFGYEVNEIAWNM-TGEMFFLTTGNGTVEVLTYPSL---RPLDTVVAHTAGCYCIAID 200 (314)
Q Consensus 133 ~i~d~~~~~~-------~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~i~~i~~~ 200 (314)
.+||+..... .... .+...+.+++|+| .+..+++++.++.+++|++... +++..+..|...+++++|+
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 286 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFN 286 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEEC
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeC
Confidence 9999987321 1112 3456799999999 6778889999999999999865 5666777899999999999
Q ss_pred CCCC-EEEEeeCCCeEEEeeCCC-cEEEEEeeecccCeEEEEEccCCc-EEEEecCCceEEEEECCC-------------
Q 021319 201 PMGR-YFAVGSADSLVSLWDISE-MLCVRTFTKLEWPVRTISFSHTGD-YIASASEDLFIDISNVHT------------- 264 (314)
Q Consensus 201 ~~~~-~l~t~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~s~d~~v~v~~~~~------------- 264 (314)
|++. ++++|+.||.|++||++. ...+..+..|..+|.+++|+|+++ +|++++.|+.|++||+..
T Consensus 287 p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 366 (430)
T 2xyi_A 287 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 366 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHC
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccC
Confidence 9987 689999999999999987 456778888999999999999995 699999999999999976
Q ss_pred -CCeEEEEe-ccCccceeEEcCCCC-eeEEEecCCcccccccceEEecccc
Q 021319 265 -GRTVHQIP-CRAAMNSVEWNPKYN-LLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 265 -~~~~~~~~-~~~~i~~v~~~~~~~-~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
...+..+. +...|++++|+|+++ +|++++.| |.++||.++
T Consensus 367 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d--------g~i~iw~~~ 409 (430)
T 2xyi_A 367 PPELLFIHGGHTAKISDFSWNPNEPWIICSVSED--------NIMQVWQMA 409 (430)
T ss_dssp CTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT--------SEEEEEEEC
T ss_pred CcceEEEcCCCCCCceEEEECCCCCCEEEEEECC--------CCEEEeEcc
Confidence 23444433 456799999999998 88999977 689999885
No 102
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.7e-34 Score=249.88 Aligned_cols=252 Identities=15% Similarity=0.233 Sum_probs=202.0
Q ss_pred EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEE---ecCceEEEEEcc-CCCEEEEEeCCCcEEEEE
Q 021319 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE---LSGENINITYKP-DGTHIAVGNRDDELTILD 136 (314)
Q Consensus 61 ~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~---~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d 136 (314)
...+|...|++|+|+|.++++|++|+.||+|+|||+.++....... +...+.+++|+| ++++|++++.|++|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 4567899999999999878899999999999999998776444332 345567899998 689999999999999999
Q ss_pred ccCCeEeeeec---cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCC-EEEEeeCC
Q 021319 137 VRKFKPIHRRK---FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGR-YFAVGSAD 212 (314)
Q Consensus 137 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~l~t~~~d 212 (314)
++......... ....+.++.|++++..+++++.+|.+++|+... +.+..+.+|...|++++|+|++. ++++|+.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 98754432222 223467899999999999999999999999854 45667789999999999999876 78899999
Q ss_pred CeEEEeeCCCcEEEEE---eeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec-c------CccceeEE
Q 021319 213 SLVSLWDISEMLCVRT---FTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC-R------AAMNSVEW 282 (314)
Q Consensus 213 g~i~vwd~~~~~~~~~---~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~-~------~~i~~v~~ 282 (314)
+.|++||+++...... ..+|..+|.+++|+|++++|++++.|+.|++||+.+++....+.. . ..+..+.|
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW 352 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE
T ss_pred ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEE
Confidence 9999999987654332 346888999999999999999999999999999999887766532 1 13557899
Q ss_pred cCCCCeeEEEecC-Ccccc---cccceEEeccccC
Q 021319 283 NPKYNLLAYAGDD-KNKYQ---ADEGVFRIYGFEN 313 (314)
Q Consensus 283 ~~~~~~la~~~~d-~~~~~---~~~~~~~~~~~~~ 313 (314)
+|++.++++++.+ +.... .++++++||+.+.
T Consensus 353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~ 387 (435)
T 4e54_B 353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS 387 (435)
T ss_dssp CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence 9999998887644 33322 3456899998753
No 103
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.9e-33 Score=247.32 Aligned_cols=252 Identities=19% Similarity=0.276 Sum_probs=209.2
Q ss_pred ceeeecccccEEEEEECCC-CCEEEEeeCCCcEEEeecCCCCC------CceeeEEeecCCCCEEEEEEcCCCCCEEEEE
Q 021319 13 SREYTGHKKKVHSVAWNCT-GTKLASGSVDQTARVWHIEPHGH------GKVKDIELRGHADSVDQLCWDPKHADLIATA 85 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~-g~~l~s~~~D~~v~iw~~~~~~~------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 85 (314)
.....+|.+.|++++|+|+ +.+|++++.||.|++|++..... .......+.+|...|.+++|+|.+..+|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 4456789999999999998 67999999999999999975210 0123346789999999999999876699999
Q ss_pred eCCCcEEEEeCCCCce-------eeeE-EecCceEEEEEcc-CCCEEEEEeCCCcEEEEEccCC---eEeeee-ccCcce
Q 021319 86 SGDKTVRLWDARSGKC-------SQQA-ELSGENINITYKP-DGTHIAVGNRDDELTILDVRKF---KPIHRR-KFGYEV 152 (314)
Q Consensus 86 ~~D~~v~iwd~~~~~~-------~~~~-~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~---~~~~~~-~~~~~~ 152 (314)
+.||+|++||+..+.. .... .....+..++|+| ++..+++++.|+.|.+||++.. +++... .+...+
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987432 1112 2334567899999 7789999999999999999876 344443 456779
Q ss_pred eeEEeccCCC-eEEEEcCCceEEEEeCCC-CCceeeeeecccceEEEEECCCCC-EEEEeeCCCeEEEeeCCC-------
Q 021319 153 NEIAWNMTGE-MFFLTTGNGTVEVLTYPS-LRPLDTVVAHTAGCYCIAIDPMGR-YFAVGSADSLVSLWDISE------- 222 (314)
Q Consensus 153 ~~~~~~~~~~-~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~i~~i~~~~~~~-~l~t~~~dg~i~vwd~~~------- 222 (314)
.+++|+|.+. .+++++.+|.+++|++.. ..++..+..|...+++++|+|+++ +|++++.|+.|++||+..
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 9999999987 578899999999999987 456778888999999999999985 699999999999999976
Q ss_pred -------cEEEEEeeecccCeEEEEEccCCc-EEEEecCCceEEEEECCC
Q 021319 223 -------MLCVRTFTKLEWPVRTISFSHTGD-YIASASEDLFIDISNVHT 264 (314)
Q Consensus 223 -------~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~s~d~~v~v~~~~~ 264 (314)
...+..+.+|...|.+++|+|+++ +|++++.|+.|++|++..
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 356667778888999999999999 999999999999999865
No 104
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.2e-33 Score=241.49 Aligned_cols=241 Identities=12% Similarity=0.191 Sum_probs=205.3
Q ss_pred eecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc--eeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 021319 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK--CSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVR 138 (314)
Q Consensus 62 ~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 138 (314)
+..|.++|.+++|+|++ ++|++++.|+.|++||+.+++ ....+. ....+.+++|+|++++|++++.|+.+.+||++
T Consensus 4 ~~~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 34589999999999974 699999999999999998886 444443 34566789999999999999999999999998
Q ss_pred CCeEeee---eccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCc---eee-eeecccceEEEEECCCCCEEEEeeC
Q 021319 139 KFKPIHR---RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP---LDT-VVAHTAGCYCIAIDPMGRYFAVGSA 211 (314)
Q Consensus 139 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~~~~~i~~i~~~~~~~~l~t~~~ 211 (314)
+.+.... ..+...+.++.|+|+++.+++++.++.+++|++..... ... ...|...+++++|+|++++|++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 8764433 34567799999999999999999999999999876653 222 2467889999999999999999999
Q ss_pred CCeEEEeeC------------------CCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec
Q 021319 212 DSLVSLWDI------------------SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 273 (314)
Q Consensus 212 dg~i~vwd~------------------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~ 273 (314)
||.|++||+ ..+.++..+..|..++.+++|+|++++|++++.|+.|++||+.+++.+..+..
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 999999995 36778888888999999999999999999999999999999999998888764
Q ss_pred -cCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 274 -RAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 274 -~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
...|++++|+|++.+|+++ .| |.++||+++
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~-~d--------~~i~i~~~~ 273 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG-HD--------CFPVLFTYD 273 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE-TT--------SSCEEEEEE
T ss_pred CCCCeEEEEEecCCCEEEEE-eC--------CeEEEEEcc
Confidence 5589999999999988876 66 456677764
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-33 Score=246.69 Aligned_cols=253 Identities=19% Similarity=0.300 Sum_probs=207.1
Q ss_pred ceeeecccccEEEEEECC-CCCEEEEeeCCCcEEEeecCCCCCCc---eeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC
Q 021319 13 SREYTGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGK---VKDIELRGHADSVDQLCWDPKHADLIATASGD 88 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~-~g~~l~s~~~D~~v~iw~~~~~~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D 88 (314)
...+.+|.+.|++++|+| ++++|++|+.|++|+||++....... .....+.+|...|.+++|+|++.++|++++.|
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 345789999999999999 89999999999999999997643210 12346789999999999999876799999999
Q ss_pred CcEEEEeCCCCceeeeE--E-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee-c-cC-cceeeEEeccCCC
Q 021319 89 KTVRLWDARSGKCSQQA--E-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR-K-FG-YEVNEIAWNMTGE 162 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~-~~-~~~~~~~~~~~~~ 162 (314)
+.|++||+++++..... . ....+.+++|+|++++|++++.|+.|++||+++.+.+... . +. ..+..+.|++++.
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 99999999999877666 2 3456778999999999999999999999999998887765 2 22 2378899999999
Q ss_pred eEEEE---cCCceEEEEeCCCCCc-eeeee-ecccceEEEEECCCCCEEE-EeeCCCeEEEeeCCCcEE-EEEeee--cc
Q 021319 163 MFFLT---TGNGTVEVLTYPSLRP-LDTVV-AHTAGCYCIAIDPMGRYFA-VGSADSLVSLWDISEMLC-VRTFTK--LE 233 (314)
Q Consensus 163 ~~~~~---~~~g~~~~~~~~~~~~-~~~~~-~~~~~i~~i~~~~~~~~l~-t~~~dg~i~vwd~~~~~~-~~~~~~--~~ 233 (314)
.++++ ..++.+.+|+....+. +.... .|...+.+++|+|++++|+ +|+.||.|++||+.+.+. +..+.. +.
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~ 313 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSK 313 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCS
T ss_pred EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccC
Confidence 99988 7999999999977553 33332 4677899999999999986 455799999999987652 344433 45
Q ss_pred cCeEEEEEccCCcEEEEecCCceEEEEECCCCCe
Q 021319 234 WPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 267 (314)
Q Consensus 234 ~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~ 267 (314)
.++.+++|+|++.++++ .|+.+++|++.+++.
T Consensus 314 ~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 314 ESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp SCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred CcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 78999999999999864 566899999987643
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.3e-32 Score=234.37 Aligned_cols=265 Identities=14% Similarity=0.143 Sum_probs=219.9
Q ss_pred CEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceE
Q 021319 33 TKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENI 112 (314)
Q Consensus 33 ~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~ 112 (314)
..+++++.|+.|++||++.. . ....+.+|. .+.+++|+|++..++++++.|++|++||+.++++.........+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~---~-~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN---K-VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT---E-EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE
T ss_pred EEEEEcCCCCEEEEEECCCC---e-EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc
Confidence 46888999999999998753 1 223455554 589999999865455788899999999999999888887777888
Q ss_pred EEEEccCCCEEEEEe-CCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeE-EEEcCCceEEEEeCCCCCceeeeeec
Q 021319 113 NITYKPDGTHIAVGN-RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMF-FLTTGNGTVEVLTYPSLRPLDTVVAH 190 (314)
Q Consensus 113 ~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~ 190 (314)
.++|+|+++.|++++ .++.|.+||+.+.+.+........+..++|+++++.+ +++..++.+.+|+....+.+..+..+
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence 999999999886554 6799999999999888777777788999999999977 67778999999999887776666554
Q ss_pred ccceEEEEECCCCCEE-EEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEec---CCceEEEEECCCCC
Q 021319 191 TAGCYCIAIDPMGRYF-AVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS---EDLFIDISNVHTGR 266 (314)
Q Consensus 191 ~~~i~~i~~~~~~~~l-~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s---~d~~v~v~~~~~~~ 266 (314)
..+.+++|+|+++++ ++++.++.|++||+++++++..+. +...+.+++|+|++++|++++ .|+.|.+||..+++
T Consensus 158 -~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 158 -RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp -SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred -CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 457999999999887 677888999999999998887765 445689999999999999888 68999999999999
Q ss_pred eEEEEeccCccceeEEcCCCCee-EEEecCCcccccccceEEecccc
Q 021319 267 TVHQIPCRAAMNSVEWNPKYNLL-AYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 267 ~~~~~~~~~~i~~v~~~~~~~~l-a~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
.+..+.....+.+++|+|+++.| ++++.| |.+++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d--------~~v~v~d~~ 274 (391)
T 1l0q_A 236 ITARIPVGPDPAGIAVTPDGKKVYVALSFX--------NTVSVIDTA 274 (391)
T ss_dssp EEEEEECCSSEEEEEECTTSSEEEEEETTT--------TEEEEEETT
T ss_pred EEEEEecCCCccEEEEccCCCEEEEEcCCC--------CEEEEEECC
Confidence 88888777778999999999877 455544 678888875
No 107
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-34 Score=246.15 Aligned_cols=248 Identities=19% Similarity=0.217 Sum_probs=190.3
Q ss_pred cceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 12 HSREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
..+.+.+|.+.|++++|+|++++|++|+.|++|++||+.... .......+.+|...|.+++|+|++ ++|++++.|+.|
T Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 124 (377)
T 3dwl_C 47 HARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG-TWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVI 124 (377)
T ss_dssp ECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCE
T ss_pred EEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC-ceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeE
Confidence 345678999999999999999999999999999999997643 112334577899999999999974 688999999999
Q ss_pred EEEeCCCCce---eeeEE--ecCceEEEEEccCCCEEEEEeCCCcEEEEEccC------------------CeEeeeecc
Q 021319 92 RLWDARSGKC---SQQAE--LSGENINITYKPDGTHIAVGNRDDELTILDVRK------------------FKPIHRRKF 148 (314)
Q Consensus 92 ~iwd~~~~~~---~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~------------------~~~~~~~~~ 148 (314)
++||++.+.. ..... ....+.+++|+|++++|++++.|+.+++||++. .+.+....+
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPS 204 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCC
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccC
Confidence 9999988762 33333 455677899999999999999999999999852 233333445
Q ss_pred CcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCc----eeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE
Q 021319 149 GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP----LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (314)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~ 224 (314)
...+.+++|+|+++.+++++.++.+++|+....+. +..+..|...+.+++|+|++++|++++.++.+ +|+.....
T Consensus 205 ~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~ 283 (377)
T 3dwl_C 205 GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESG 283 (377)
T ss_dssp SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC--
T ss_pred CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCc
Confidence 56789999999999999999999999999988776 77788999999999999999999999877766 66554111
Q ss_pred ------------------------------EE------EEe----------------eecccCeEEEEEccCC-c---EE
Q 021319 225 ------------------------------CV------RTF----------------TKLEWPVRTISFSHTG-D---YI 248 (314)
Q Consensus 225 ------------------------------~~------~~~----------------~~~~~~v~~~~~sp~~-~---~l 248 (314)
.. ..+ ..|...|.++++.+.. . .|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~ 363 (377)
T 3dwl_C 284 WAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAF 363 (377)
T ss_dssp -CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEE
T ss_pred eEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEE
Confidence 00 111 1277889999976544 3 69
Q ss_pred EEecCCceEEEEEC
Q 021319 249 ASASEDLFIDISNV 262 (314)
Q Consensus 249 ~s~s~d~~v~v~~~ 262 (314)
+|+|.||.|++||+
T Consensus 364 ~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 364 TSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEETTSEEEEECC
T ss_pred EeecCCCcEEEecC
Confidence 99999999999985
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.7e-33 Score=244.77 Aligned_cols=286 Identities=12% Similarity=0.095 Sum_probs=196.7
Q ss_pred cEEEEEE---CCCCCEEEEeeCCCcEEEeecCCCCCC-----ceeeEEeecCCCCEEEEEEcC-----------------
Q 021319 22 KVHSVAW---NCTGTKLASGSVDQTARVWHIEPHGHG-----KVKDIELRGHADSVDQLCWDP----------------- 76 (314)
Q Consensus 22 ~V~~v~~---s~~g~~l~s~~~D~~v~iw~~~~~~~~-----~~~~~~~~~h~~~v~~l~~~~----------------- 76 (314)
..+++.| +|++..|++++.|+.|++|+....... .........+...+..+.|++
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNS 96 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceee
Confidence 3445566 455566777777999999986432211 111112223445555555543
Q ss_pred --CCCCEEEEEeCCCcEEEEeCCCCceeeeEE------ecCceEEEEEcc--------CCCEEEEEeCCCcEEEEEccCC
Q 021319 77 --KHADLIATASGDKTVRLWDARSGKCSQQAE------LSGENINITYKP--------DGTHIAVGNRDDELTILDVRKF 140 (314)
Q Consensus 77 --~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~------~~~~~~~~~~~~--------~~~~l~~~~~d~~i~i~d~~~~ 140 (314)
....++++++.|++|++||.+.+.+..... +...+..++|+| |+++|++++.|+++++||+++.
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 223579999999999999998887654322 234567899987 8899999999999999999887
Q ss_pred eEeee-eccCcceeeEEeccCCC-eEEEEcCCceEEEEeCCCCCceee-------------------------eeecccc
Q 021319 141 KPIHR-RKFGYEVNEIAWNMTGE-MFFLTTGNGTVEVLTYPSLRPLDT-------------------------VVAHTAG 193 (314)
Q Consensus 141 ~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~-------------------------~~~~~~~ 193 (314)
.++.. ..+...+.+++|+|++. .+++++.++.+++|++...+.... ..+|...
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 66544 45667889999999875 788899999999999865432211 1246667
Q ss_pred eEEEEEC-CCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEE------------------EEcc--CCcEEEEec
Q 021319 194 CYCIAID-PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI------------------SFSH--TGDYIASAS 252 (314)
Q Consensus 194 i~~i~~~-~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~------------------~~sp--~~~~l~s~s 252 (314)
+.++.|+ |+++.+++++.|+++++||+........+..+...+..+ .|+| ++.++++|+
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs 336 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS 336 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC
Confidence 8888886 799999999999999999998776655554443333333 3333 345788899
Q ss_pred CCceEEEEECCCCCeEEE-EeccCccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 253 EDLFIDISNVHTGRTVHQ-IPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 253 ~d~~v~v~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
.|+.|++||+.+++.+.. ..+..+|++|+|||++++||++++|+-+ .+|++||.+
T Consensus 337 ~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~------lvrL~gf~~ 392 (393)
T 4gq1_A 337 QHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVL------LTRLMGFTR 392 (393)
T ss_dssp TTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEE------EEEEGGGCC
T ss_pred CCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeE------EEEEeCccc
Confidence 999999999999887765 4467799999999999999999977532 278888854
No 109
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=247.80 Aligned_cols=239 Identities=15% Similarity=0.259 Sum_probs=192.9
Q ss_pred cCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc-----------eeeeEEec-------------CceEEEEEccC
Q 021319 64 GHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK-----------CSQQAELS-------------GENINITYKPD 119 (314)
Q Consensus 64 ~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~-----------~~~~~~~~-------------~~~~~~~~~~~ 119 (314)
.|.+.|.+++|+|+ +++|++|+.|+.|++||+.++. +...+..+ ..+.+++|+|+
T Consensus 26 ~~~~~V~~v~~s~~-g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHS-GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSS-SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCC-CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 46789999999997 5799999999999999998765 23333322 44668999999
Q ss_pred C--CEEEEEeCCCcEEEEEccCCeEe---------------------------------------ee--eccCcceeeEE
Q 021319 120 G--THIAVGNRDDELTILDVRKFKPI---------------------------------------HR--RKFGYEVNEIA 156 (314)
Q Consensus 120 ~--~~l~~~~~d~~i~i~d~~~~~~~---------------------------------------~~--~~~~~~~~~~~ 156 (314)
+ ..+++++.|+.|++||+...+.. .. ..+...+.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 89999999999999998764321 01 23456789999
Q ss_pred eccCCCeEEEEcCCceEEEEeCCC-CCcee-------eeeecccceEEEEECCCC-CEEEEeeCCCeEEEeeCCCcEE--
Q 021319 157 WNMTGEMFFLTTGNGTVEVLTYPS-LRPLD-------TVVAHTAGCYCIAIDPMG-RYFAVGSADSLVSLWDISEMLC-- 225 (314)
Q Consensus 157 ~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~-------~~~~~~~~i~~i~~~~~~-~~l~t~~~dg~i~vwd~~~~~~-- 225 (314)
|+|+++.++++ .++.+++|++.. .+.+. .+.+|...+++++|+|++ ++|++|+.||.|++||++++..
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 99999999998 899999999973 33333 245788999999999998 9999999999999999998775
Q ss_pred --EEEeeeccc------------CeEEEEEccCCcEEEEecCCceEEEEECCC-CCeEEEEeccCc--------------
Q 021319 226 --VRTFTKLEW------------PVRTISFSHTGDYIASASEDLFIDISNVHT-GRTVHQIPCRAA-------------- 276 (314)
Q Consensus 226 --~~~~~~~~~------------~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~-~~~~~~~~~~~~-------------- 276 (314)
+..+..+.. +|.+++|+|++++|++++. +.|++||+.+ ++.+..+.....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 677777765 8999999999999999999 9999999987 777777654333
Q ss_pred --cceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 277 --MNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 277 --i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+..++|+|++.+|++++.| |.++||+++.
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~d--------g~v~iwd~~~ 373 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYN--------NFFRMFDRNT 373 (447)
T ss_dssp GCCCCEEECTTSSEEEEECST--------TEEEEEETTT
T ss_pred ccceEEEECCCCCEEEEeccC--------CEEEEEEcCC
Confidence 2239999999999999977 6788998853
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.5e-32 Score=227.01 Aligned_cols=243 Identities=19% Similarity=0.272 Sum_probs=198.0
Q ss_pred eecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q 021319 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (314)
Q Consensus 16 ~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd 95 (314)
+.+|...|++|+|+|++++|+||+.|++|++|++++. .....+.+|...+.++.+.+ .++++++.++.+++|+
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~----~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~ 135 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ----KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHD 135 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc----eeEEEecCccceEEEeecCC---CEEEEEecCCceEeee
Confidence 4578889999999999999999999999999998753 23346789999998877653 5899999999999999
Q ss_pred CCCCcee-eeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEe-----eeeccCcceeeEEeccCCCeEE---
Q 021319 96 ARSGKCS-QQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPI-----HRRKFGYEVNEIAWNMTGEMFF--- 165 (314)
Q Consensus 96 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--- 165 (314)
....... .... .......+.+.++++++++++.|+.+++||+++.+.. ........+..+.+++.+..++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 215 (318)
T 4ggc_A 136 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 215 (318)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEE
T ss_pred cCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEE
Confidence 8776443 2222 3445667889999999999999999999999865432 1223345678888888776443
Q ss_pred EEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEe--eCCCeEEEeeCCCcEEEEEeeecccCeEEEEEcc
Q 021319 166 LTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVG--SADSLVSLWDISEMLCVRTFTKLEWPVRTISFSH 243 (314)
Q Consensus 166 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~--~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp 243 (314)
.+..++.+++|+......... ..+...+..+.++|+++.++++ +.|+.|++||+.+++++.++.+|..+|.+++|+|
T Consensus 216 ~~~~~~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~sp 294 (318)
T 4ggc_A 216 GGTSDRHIRIWNVCSGACLSA-VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP 294 (318)
T ss_dssp ECTTTCEEEEEETTTCCEEEE-EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred ecCCCCEEEEEeccccccccc-ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 445779999999877665433 4567789999999999987765 4799999999999999999999999999999999
Q ss_pred CCcEEEEecCCceEEEEECCCCC
Q 021319 244 TGDYIASASEDLFIDISNVHTGR 266 (314)
Q Consensus 244 ~~~~l~s~s~d~~v~v~~~~~~~ 266 (314)
++++|||||.|+.|++||+.+..
T Consensus 295 dg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 295 DGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TSSCEEEEETTTEEEEECCSCCC
T ss_pred CCCEEEEEecCCeEEEEECCCCC
Confidence 99999999999999999987643
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.5e-31 Score=227.95 Aligned_cols=252 Identities=14% Similarity=0.144 Sum_probs=207.5
Q ss_pred eeeecccccEEEEEECCCCCEE-EEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 14 REYTGHKKKVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l-~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
+.+.+|. .+.+++|+|+|++| ++++.|+.|++||+.+.. ....+..+ ..+.+++|+|++..++++++.|+.|+
T Consensus 26 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~----~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~ 99 (391)
T 1l0q_A 26 ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN----VIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLS 99 (391)
T ss_dssp EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE----EEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe----EEEEEECC-CCccceEECCCCCEEEEEECCCCEEE
Confidence 3445554 58999999999976 677799999999986532 22234433 38999999998654556777789999
Q ss_pred EEeCCCCceeeeEEecCceEEEEEccCCCEE-EEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeE-EEEcCC
Q 021319 93 LWDARSGKCSQQAELSGENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMF-FLTTGN 170 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 170 (314)
+||+.+++.............++|+|+++.+ ++++.++.|.+||+++.+.+........+..+.|+|+++.+ +++..+
T Consensus 100 v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 100 VIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT
T ss_pred EEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCC
Confidence 9999999888777777778889999999988 67778999999999998888777777778999999999877 566788
Q ss_pred ceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEee---CCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcE
Q 021319 171 GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGS---ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDY 247 (314)
Q Consensus 171 g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~---~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 247 (314)
+.+++|+....+....+. +...+.+++|+|+++++++++ .++.|++||+.+++.+..+..+. .+.+++|+|++++
T Consensus 180 ~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~ 257 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKK 257 (391)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSE
T ss_pred CEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCE
Confidence 999999998776555443 556789999999999998887 68999999999998888887655 5789999999987
Q ss_pred E-EEecCCceEEEEECCCCCeEEEEec
Q 021319 248 I-ASASEDLFIDISNVHTGRTVHQIPC 273 (314)
Q Consensus 248 l-~s~s~d~~v~v~~~~~~~~~~~~~~ 273 (314)
| ++++.|+.|++||+.+++.+..+..
T Consensus 258 l~~s~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 258 VYVALSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence 7 6778999999999999988877754
No 112
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-32 Score=233.96 Aligned_cols=243 Identities=22% Similarity=0.324 Sum_probs=200.9
Q ss_pred eeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEE--cCCCCCEEEEEeCCCcE
Q 021319 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW--DPKHADLIATASGDKTV 91 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~~~D~~v 91 (314)
+.+.+|.+.|++++|+|++++|++|+.|+.|++||++.. ....+.+|...|.+++| +|+ +.+|++++.|+.|
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i 153 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN-----QAIQIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTL 153 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-----EEEEEEECSSCEEEEEEEECSS-CEEEEEEETTSEE
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC-----CceeeccccCceEEEEEEeCCC-CCEEEEccCCCcE
Confidence 567899999999999999999999999999999998753 22346789999999999 776 4689999999999
Q ss_pred EEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee---ccCcceeeEEeccCCCe----E
Q 021319 92 RLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR---KFGYEVNEIAWNMTGEM----F 164 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~ 164 (314)
++||+++++.............+.+. ...+++++.++.+.+|+++........ ........+.+.+.... +
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGF 231 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred EEEECCCCcEEEEEecCCCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeE
Confidence 99999999887777766666666555 458889999999999999876443222 22344556666555544 8
Q ss_pred EEEcCCceEEEEeCCCC---Cceeeeeeccc------------ceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 165 FLTTGNGTVEVLTYPSL---RPLDTVVAHTA------------GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 165 ~~~~~~g~~~~~~~~~~---~~~~~~~~~~~------------~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
++++.+|.+++|++... .....+..|.. .+++++|+|++++|++++.||.|++||+.+++++..+
T Consensus 232 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 232 ALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred EEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 99999999999999776 34555666665 6999999999999999999999999999999999999
Q ss_pred eecccCeEEEEEccCCcEEEEecCCceEEEEECCC
Q 021319 230 TKLEWPVRTISFSHTGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 230 ~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~ 264 (314)
..|..+|.+++|+|++++|++++.|+....|+...
T Consensus 312 ~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 312 EQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred cCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 99999999999999999999999998666555443
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.2e-32 Score=242.48 Aligned_cols=255 Identities=19% Similarity=0.292 Sum_probs=198.8
Q ss_pred ceeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 13 SREYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
.+.+.+|.+.|.+++| ++++|++|+.||+|++||+++.. ....+.+|...|.+++|++ +.+++|+.|+.|+
T Consensus 166 ~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~ 236 (435)
T 1p22_A 166 KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE----MLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIA 236 (435)
T ss_dssp EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC----EEEEECCCCSCEEEEECCT---TEEEEEETTSCEE
T ss_pred EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc----EEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEE
Confidence 4567899999999998 78999999999999999997642 3346778999999999974 4899999999999
Q ss_pred EEeCCCCceee---eEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEE
Q 021319 93 LWDARSGKCSQ---QAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLT 167 (314)
Q Consensus 93 iwd~~~~~~~~---~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 167 (314)
+||+.++.... ... ....+.++.+ +++.+++++.|+.+++||+++.+.+.... +...+.++.+ ++..++++
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g 312 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSG 312 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEE
Confidence 99998876542 221 2334556666 78899999999999999999988877654 4556777777 57899999
Q ss_pred cCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE---------EEEEeeecccCeEE
Q 021319 168 TGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML---------CVRTFTKLEWPVRT 238 (314)
Q Consensus 168 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~---------~~~~~~~~~~~v~~ 238 (314)
+.+|.+++|+....+.+..+.+|...+.++++ ++.++++|+.||.|++||+..+. ++..+..|..+|.+
T Consensus 313 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 390 (435)
T 1p22_A 313 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 390 (435)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCC
T ss_pred eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEE
Confidence 99999999999998888889999999999999 68899999999999999997655 78888899999999
Q ss_pred EEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcC
Q 021319 239 ISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNP 284 (314)
Q Consensus 239 ~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~ 284 (314)
++| ++.+|++++.|+.|++||+.+...........+..++.|.+
T Consensus 391 l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 434 (435)
T 1p22_A 391 LQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTYIS 434 (435)
T ss_dssp EEE--CSSCEEECCSSSEEEEEC-----------------------
T ss_pred EEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCCCCCccceeeec
Confidence 999 78999999999999999998876665555555667776654
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-32 Score=233.88 Aligned_cols=238 Identities=15% Similarity=0.193 Sum_probs=200.8
Q ss_pred ecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc----eeeeEEecCceEEEEEccCCC-EEEEEeCCCcEEEEEc
Q 021319 63 RGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK----CSQQAELSGENINITYKPDGT-HIAVGNRDDELTILDV 137 (314)
Q Consensus 63 ~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~ 137 (314)
.+|.+.|.+++|+|+ +++|++++.|+.|++||+.++. ..........+.+++|+|+++ +|++++.|+.|.+||+
T Consensus 8 ~~h~~~v~~~~~s~~-~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 8 QAPKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SCCSSCEEEEEEEGG-GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred cCCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 479999999999997 4689999999999999998877 444445566778899999999 9999999999999999
Q ss_pred -cCCeEeeeec--cCcceeeEEeccCCCeEEEEcCCceEEEEeCCC---------CCceeeeeecccceEEEEECCCCCE
Q 021319 138 -RKFKPIHRRK--FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPS---------LRPLDTVVAHTAGCYCIAIDPMGRY 205 (314)
Q Consensus 138 -~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~~~~~~~~i~~i~~~~~~~~ 205 (314)
...+...... +...+.++.|++ +..+++++.++.+++|+... .+++..+. |...+.+++|+|++
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-- 162 (342)
T 1yfq_A 87 IGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-- 162 (342)
T ss_dssp SSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--
T ss_pred ccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--
Confidence 8776544444 667899999999 99999999999999999876 66665555 88899999999887
Q ss_pred EEEeeCCCeEEEeeCCC-cE--EEEEeeecccCeEEEEEcc-CCcEEEEecCCceEEEEECCCC------CeEEEEec-c
Q 021319 206 FAVGSADSLVSLWDISE-ML--CVRTFTKLEWPVRTISFSH-TGDYIASASEDLFIDISNVHTG------RTVHQIPC-R 274 (314)
Q Consensus 206 l~t~~~dg~i~vwd~~~-~~--~~~~~~~~~~~v~~~~~sp-~~~~l~s~s~d~~v~v~~~~~~------~~~~~~~~-~ 274 (314)
+++++.|+.|++||+++ +. .......+...+.+++|+| +++++++++.|+.+++|+.... +....+.. .
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccc
Confidence 89999999999999987 43 2234446778899999999 9999999999999999999876 66666653 2
Q ss_pred ---------CccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 275 ---------AAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 275 ---------~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
..|++++|+|++++|++++.| |.++||+++.
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------g~i~vwd~~~ 282 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSD--------GIISCWNLQT 282 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEETT--------SCEEEEETTT
T ss_pred ccccccccceeEEEEEEcCCCCEEEEecCC--------ceEEEEcCcc
Confidence 289999999999999999977 5788888753
No 115
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.1e-32 Score=227.27 Aligned_cols=213 Identities=20% Similarity=0.237 Sum_probs=163.8
Q ss_pred ceeeecccccEEEEEECCC--CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCC-CCEEEEEeCCC
Q 021319 13 SREYTGHKKKVHSVAWNCT--GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDK 89 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~--g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~D~ 89 (314)
...+.+|.+.|++++|+|+ +++|+||+.|++|+|||++.... .....+.+|...|.+++|+|+. +.+|++++.|+
T Consensus 46 ~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB--CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce--EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 4678899999999999874 89999999999999999975321 1223567899999999999963 56899999999
Q ss_pred cEEEEeCCCCcee--eeE-EecCceEEEEEccC-------------CCEEEEEeCCCcEEEEEccCCeEeeeeccCccee
Q 021319 90 TVRLWDARSGKCS--QQA-ELSGENINITYKPD-------------GTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVN 153 (314)
Q Consensus 90 ~v~iwd~~~~~~~--~~~-~~~~~~~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 153 (314)
+|++||++++... ... .......+++|+|+ +++|++++.|+.|++||++..+...
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~--------- 194 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY--------- 194 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEE---------
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceE---------
Confidence 9999999876322 122 22345667889886 3566777777777777664321000
Q ss_pred eEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCC---CEEEEeeCCCeEEEeeCCCcE---EEE
Q 021319 154 EIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMG---RYFAVGSADSLVSLWDISEML---CVR 227 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~---~~l~t~~~dg~i~vwd~~~~~---~~~ 227 (314)
.....+.+|...|++++|+|++ ++||+++.|++|++||++... ...
T Consensus 195 ----------------------------~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~ 246 (297)
T 2pm7_B 195 ----------------------------VLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKT 246 (297)
T ss_dssp ----------------------------EEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE
T ss_pred ----------------------------EEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCcccee
Confidence 0123456799999999999984 899999999999999987632 222
Q ss_pred Ee--eecccCeEEEEEccCCcEEEEecCCceEEEEECCC
Q 021319 228 TF--TKLEWPVRTISFSHTGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 228 ~~--~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~ 264 (314)
.+ ..+...|.+++|+|++++||+++.|+.|++|+...
T Consensus 247 ~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 247 LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp ESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 33 45677899999999999999999999999999763
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.6e-31 Score=232.42 Aligned_cols=280 Identities=16% Similarity=0.181 Sum_probs=195.2
Q ss_pred ecccccEEEEEECC-CCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCC--CCEEEEEeCCCcEEE
Q 021319 17 TGHKKKVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH--ADLIATASGDKTVRL 93 (314)
Q Consensus 17 ~gH~~~V~~v~~s~-~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~--~~~l~s~~~D~~v~i 93 (314)
.+|...|.+++|+| ++.+|++++.|+.|++||+.... . .....+...+.++.++|.. ..++++++.|+.|++
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ----T-ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE----E-EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc----c-ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence 36999999999999 77899999999999999987532 1 2233478889999999864 348999999999999
Q ss_pred EeCCCCceeeeEE-ecCceEEEEEccCCC-EEEEEeCCCcEEEEEccCCeE-eee----------------eccCcceee
Q 021319 94 WDARSGKCSQQAE-LSGENINITYKPDGT-HIAVGNRDDELTILDVRKFKP-IHR----------------RKFGYEVNE 154 (314)
Q Consensus 94 wd~~~~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~-~~~----------------~~~~~~~~~ 154 (314)
||+++++...... ....+.+++|+|+++ .+++++.|+.+.+||++.... +.. ..+...+.+
T Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 171 CDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp EESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred EeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 9999888766655 345567899999998 588999999999999986542 111 123456899
Q ss_pred EEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecc-----cceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 155 IAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-----AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 155 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
++|+|++..+++++.+|.+++|++...+.......+. ..+........+..+++++.++.|++||+.++..+..+
T Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 330 (408)
T 4a11_B 251 LCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML 330 (408)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence 9999999999999999999999998766544332221 11222222233456666788999999999999999999
Q ss_pred eecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCe-eEEEecCCcccccccceEEe
Q 021319 230 TKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNL-LAYAGDDKNKYQADEGVFRI 308 (314)
Q Consensus 230 ~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~-la~~~~d~~~~~~~~~~~~~ 308 (314)
.+|..+|.+++|+|++++|++++.|+.|++|++.+++.+...... .....++|.... +.++++ +|.++|
T Consensus 331 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~ 400 (408)
T 4a11_B 331 KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDET--TTKSQLNPAFEDAWSSSDE--------EGGTSA 400 (408)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------------------------------------------
T ss_pred ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCce--EeccccccccceeecccCc--------cCceee
Confidence 999999999999999999999999999999999998877654322 223445554333 333333 378999
Q ss_pred ccc
Q 021319 309 YGF 311 (314)
Q Consensus 309 ~~~ 311 (314)
|..
T Consensus 401 W~~ 403 (408)
T 4a11_B 401 WSH 403 (408)
T ss_dssp ---
T ss_pred cCC
Confidence 975
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=242.40 Aligned_cols=258 Identities=13% Similarity=0.088 Sum_probs=199.4
Q ss_pred eeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEE
Q 021319 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~i 93 (314)
+.+.||.+.|.+|+|+|+| .++.+++|+.+. ... ..+ .|...|.+++|+|++ ..||+++.||.|++
T Consensus 46 ~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~---~~~--~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~i 111 (588)
T 2j04_A 46 KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQ---NGL--LNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSV 111 (588)
T ss_dssp SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCS---SCS--STT-SCSCCEEEEEECSSS-SCEEEEETTSCEEE
T ss_pred ceecCCCccEEEEEECCCC-------CcceEEEEeCCC---ceE--eec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEE
Confidence 4457999999999999999 567766665432 111 112 568889999999985 68999999999999
Q ss_pred EeCCCCceeeeEEecC------ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeE-------eeeec-----cCcceeeE
Q 021319 94 WDARSGKCSQQAELSG------ENINITYKPDGTHIAVGNRDDELTILDVRKFKP-------IHRRK-----FGYEVNEI 155 (314)
Q Consensus 94 wd~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-------~~~~~-----~~~~~~~~ 155 (314)
||... +..... +. ...+++|+|||++|++|+.||+|++||+..... +...+ +...+.++
T Consensus 112 wd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sV 188 (588)
T 2j04_A 112 FKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHI 188 (588)
T ss_dssp EETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEE
T ss_pred EeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEE
Confidence 99543 434333 22 367899999999999999999999999987642 34432 23479999
Q ss_pred EeccCCCeEEEEcCCceEEEEeCCCCCc---eeee-eecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee
Q 021319 156 AWNMTGEMFFLTTGNGTVEVLTYPSLRP---LDTV-VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (314)
Q Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~-~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~ 231 (314)
+|+|++ +++++.|+.+++|+...... ..++ .+|...|.+++|+ ++.+|+++ +++|++||+.+.+......+
T Consensus 189 awSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~g 263 (588)
T 2j04_A 189 VWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTG 263 (588)
T ss_dssp EEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECS
T ss_pred EEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcC
Confidence 999999 78888999999999877653 2345 3788899999999 68999887 69999999998877433337
Q ss_pred cccCeEEEEE--ccCCcEEEEecCCceEEEEECCC------CC-----------------eEEEEeccCccceeEEcCCC
Q 021319 232 LEWPVRTISF--SHTGDYIASASEDLFIDISNVHT------GR-----------------TVHQIPCRAAMNSVEWNPKY 286 (314)
Q Consensus 232 ~~~~v~~~~~--sp~~~~l~s~s~d~~v~v~~~~~------~~-----------------~~~~~~~~~~i~~v~~~~~~ 286 (314)
|...+..++| +|++..|+++++||. ++|.... +. .+..+.....|++|+|||+|
T Consensus 264 h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG 342 (588)
T 2j04_A 264 SLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDG 342 (588)
T ss_dssp CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTS
T ss_pred CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCC
Confidence 9899999999 999999999999999 9998642 10 01111111238899999999
Q ss_pred CeeEEEec
Q 021319 287 NLLAYAGD 294 (314)
Q Consensus 287 ~~la~~~~ 294 (314)
.++|++++
T Consensus 343 ~~lA~~~~ 350 (588)
T 2j04_A 343 YSIAIVYD 350 (588)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEe
Confidence 99999885
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.4e-31 Score=229.67 Aligned_cols=234 Identities=11% Similarity=0.131 Sum_probs=185.6
Q ss_pred EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEE-EEeCCCcEEEEEccC
Q 021319 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDELTILDVRK 139 (314)
Q Consensus 61 ~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~ 139 (314)
....|...|.+++|+|++ .+|++|+.| .+++||..++......... ....+.+.++++.++ +++.|+.+++||+++
T Consensus 14 ~~~~h~~~V~~v~fs~dg-~~la~g~~~-~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQ-SCLILSTLK-SFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -----CCCCCEEEECTTS-SEEEEECSS-EEEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccccCCCceEEEEECCCC-CEEEEEcCC-EEEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 457899999999999985 688887766 5799998877655444333 345577888888875 577788999999999
Q ss_pred CeEeeeeccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCC-CceeeeeecccceEEEEECCCCCEEEE--eeCCCeEE
Q 021319 140 FKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSL-RPLDTVVAHTAGCYCIAIDPMGRYFAV--GSADSLVS 216 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~l~t--~~~dg~i~ 216 (314)
.+.+........+.++.++++. ++++ .++.+++|++... +.+..+.. ....+++++ .+++. |+.||.|+
T Consensus 91 ~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~ 162 (355)
T 3vu4_A 91 KQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIH 162 (355)
T ss_dssp TEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEE
T ss_pred CcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEE
Confidence 9998888877788999887654 3333 4789999999876 55555544 344556676 56665 68999999
Q ss_pred EeeCCCcE----------------EEEEeeecccCeEEEEEccCCcEEEEecCCce-EEEEECCCCCeEEEEe---ccCc
Q 021319 217 LWDISEML----------------CVRTFTKLEWPVRTISFSHTGDYIASASEDLF-IDISNVHTGRTVHQIP---CRAA 276 (314)
Q Consensus 217 vwd~~~~~----------------~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~-v~v~~~~~~~~~~~~~---~~~~ 276 (314)
+||+.++. ++..+.+|..+|.+++|+|++++||||+.|+. |++||+.+++.+..+. +...
T Consensus 163 iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~ 242 (355)
T 3vu4_A 163 ITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD 242 (355)
T ss_dssp EEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC
T ss_pred EEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc
Confidence 99998764 26778899999999999999999999999998 9999999999999987 6789
Q ss_pred cceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 277 MNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 277 i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
|++++|+|++++|++++.| |+++||++++
T Consensus 243 v~~~~~s~~~~~l~s~s~d--------~~v~iw~~~~ 271 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDK--------WTLHVFEIFN 271 (355)
T ss_dssp EEEEEECTTSCEEEEEETT--------CEEEEEESSC
T ss_pred EEEEEECCCCCEEEEEECC--------CEEEEEEccC
Confidence 9999999999999999987 6899999854
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=8.4e-33 Score=240.42 Aligned_cols=243 Identities=16% Similarity=0.155 Sum_probs=167.5
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCce-eeEEeecCCCCEEEEEEcCC-------CCCEEEEEeCCC
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKV-KDIELRGHADSVDQLCWDPK-------HADLIATASGDK 89 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~-~~~~~~~h~~~v~~l~~~~~-------~~~~l~s~~~D~ 89 (314)
+|...+....+++++.+|++|+.|++|||||++....... ....+.||.+.|++++|+|. ++++|+|||.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 3444455555566677899999999999999875321111 11236799999999999872 357999999999
Q ss_pred cEEEEeCCCCceee-eEEecCceEEEEEccCCC-EEEEEeCCCcEEEEEccCCeEeeee---------------------
Q 021319 90 TVRLWDARSGKCSQ-QAELSGENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRR--------------------- 146 (314)
Q Consensus 90 ~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~--------------------- 146 (314)
+|||||++++.... .........+++|+|++. +|++++.|+.|++||+++.+.....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 99999998776544 445667788999999875 7999999999999999876532211
Q ss_pred -----ccCcceeeEEec-cCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEE------------------ECC-
Q 021319 147 -----KFGYEVNEIAWN-MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIA------------------IDP- 201 (314)
Q Consensus 147 -----~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~------------------~~~- 201 (314)
.+...+..+.|. +++..++++..++.+++|++...+....+..|...+..+. ++|
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 112345667775 7899999999999999999876554444444443333322 222
Q ss_pred -CCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEE
Q 021319 202 -MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDIS 260 (314)
Q Consensus 202 -~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~ 260 (314)
++.++++|+.||.|++||+.+++++..+..|..+|.+++|||+|++||+++.||.+.+.
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvr 386 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTR 386 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 34467888899999999999988888888888999999999999999999998854443
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-30 Score=230.70 Aligned_cols=234 Identities=13% Similarity=0.127 Sum_probs=195.1
Q ss_pred CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc---eeeeEEec-----------------------------------
Q 021319 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGK---CSQQAELS----------------------------------- 108 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~---~~~~~~~~----------------------------------- 108 (314)
.++.+++|+|++. +|+++ .++.|++||+.+++ ........
T Consensus 5 ~p~~~v~~s~dg~-~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGS-LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSS-EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCC-EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4678899999864 66554 57899999998887 43332211
Q ss_pred --------------------CceEEEEEccCCCEE-EEEeCCCcEEEEEcc--CCeEeeee---ccCcceeeEEeccCCC
Q 021319 109 --------------------GENINITYKPDGTHI-AVGNRDDELTILDVR--KFKPIHRR---KFGYEVNEIAWNMTGE 162 (314)
Q Consensus 109 --------------------~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~--~~~~~~~~---~~~~~~~~~~~~~~~~ 162 (314)
..+.+++|+|++++| ++++.|+.+++||+. ..+.+... .+...+.+++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 135679999999996 889999999999998 66555544 3456789999999999
Q ss_pred eEEEEcCCceEEEEeCCCCCcee----eeeecccceEEEEECCC---CCEEEEeeCCCeEEEeeCCCcEEEEE-eeeccc
Q 021319 163 MFFLTTGNGTVEVLTYPSLRPLD----TVVAHTAGCYCIAIDPM---GRYFAVGSADSLVSLWDISEMLCVRT-FTKLEW 234 (314)
Q Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~i~~i~~~~~---~~~l~t~~~dg~i~vwd~~~~~~~~~-~~~~~~ 234 (314)
.++++..+|.+++|++...+... .+.+|...|++++|+|+ +++|++|+.|+.|++||+.++.++.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999987665443 67789999999999999 99999999999999999998887776 558889
Q ss_pred CeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec--------------------------cCccceeEEcCCCCe
Q 021319 235 PVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC--------------------------RAAMNSVEWNPKYNL 288 (314)
Q Consensus 235 ~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~--------------------------~~~i~~v~~~~~~~~ 288 (314)
.|.+++|+ ++++|++++.|+.|++||+.+++.+..+.. ...|.+++|+|++++
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 99999999 999999999999999999999998887752 235889999999999
Q ss_pred eEEEe-cCCcccccccceEEeccc
Q 021319 289 LAYAG-DDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 289 la~~~-~d~~~~~~~~~~~~~~~~ 311 (314)
|++++ .| |.++||++
T Consensus 322 l~~~~~~d--------~~i~iw~~ 337 (450)
T 2vdu_B 322 VAFFVEAT--------KCIIILEM 337 (450)
T ss_dssp EEEEETTC--------SEEEEEEE
T ss_pred EEEEECCC--------CeEEEEEe
Confidence 99998 44 67888887
No 121
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-31 Score=226.32 Aligned_cols=225 Identities=20% Similarity=0.242 Sum_probs=163.1
Q ss_pred ceeeecccccEEEEEECC--CCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCC-CCEEEEEeCCC
Q 021319 13 SREYTGHKKKVHSVAWNC--TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDK 89 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~--~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~D~ 89 (314)
...+.+|.+.|++|+|+| ++++|+||+.|++|++||++.... .....+.+|...|.+++|+|+. +.+|++|+.|+
T Consensus 50 ~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~--~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~ 127 (316)
T 3bg1_A 50 IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW--EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 127 (316)
T ss_dssp EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC--CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS
T ss_pred EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc--eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC
Confidence 456889999999999986 489999999999999999875321 2334577999999999999973 56899999999
Q ss_pred cEEEEeCCCCceee---eE-EecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEE
Q 021319 90 TVRLWDARSGKCSQ---QA-ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFF 165 (314)
Q Consensus 90 ~v~iwd~~~~~~~~---~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (314)
+|++||++.+.... .. .......+++|+|+... +. +.+.... .....+..++
T Consensus 128 ~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-------~~--~~~~~~~---------------~~~~~~~~l~ 183 (316)
T 3bg1_A 128 AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP-------GS--LIDHPSG---------------QKPNYIKRFA 183 (316)
T ss_dssp CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---------------CCS---------------CCCCCCCBEE
T ss_pred CEEEEecCCCCCcceeeeeccccCCcceEEEccccCC-------cc--ccccccc---------------cCccccceEE
Confidence 99999998653211 11 11223446778876310 00 0000000 0011234556
Q ss_pred EEcCCceEEEEeCCCC---CceeeeeecccceEEEEECCCC----CEEEEeeCCCeEEEeeCCCc---E-EEEEeeeccc
Q 021319 166 LTTGNGTVEVLTYPSL---RPLDTVVAHTAGCYCIAIDPMG----RYFAVGSADSLVSLWDISEM---L-CVRTFTKLEW 234 (314)
Q Consensus 166 ~~~~~g~~~~~~~~~~---~~~~~~~~~~~~i~~i~~~~~~----~~l~t~~~dg~i~vwd~~~~---~-~~~~~~~~~~ 234 (314)
+++.|+.+++|+.... +++..+.+|...|++++|+|++ ++||+++.|++|++||+.+. . ..+.+..|..
T Consensus 184 sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 263 (316)
T 3bg1_A 184 SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFND 263 (316)
T ss_dssp CCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSS
T ss_pred EecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCC
Confidence 6666666666665432 2345567899999999999986 89999999999999998752 1 1234456788
Q ss_pred CeEEEEEccCCcEEEEecCCceEEEEECC
Q 021319 235 PVRTISFSHTGDYIASASEDLFIDISNVH 263 (314)
Q Consensus 235 ~v~~~~~sp~~~~l~s~s~d~~v~v~~~~ 263 (314)
.|.+++|+|++++||+++.|+.|++|+..
T Consensus 264 ~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 264 VVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999999999999999999999999975
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.8e-29 Score=221.81 Aligned_cols=244 Identities=13% Similarity=0.096 Sum_probs=204.8
Q ss_pred eeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
.+.+|.+.|.+++|+|++.++++++.|+.|++||++... ....+..|...+.+++|+|++..++++++.|+.|++|
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~ 239 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA----YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVI 239 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC----EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce----EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEE
Confidence 456899999999999999999999999999999987532 2335668899999999999865455677789999999
Q ss_pred eCCCCceeeeEEecCceEEEEEccCCCEEEEEe--------CCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeE-E
Q 021319 95 DARSGKCSQQAELSGENINITYKPDGTHIAVGN--------RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMF-F 165 (314)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 165 (314)
|+++++.............++++|+++.+++++ .|+.|.+||+++.+.+........+..++|+|+++.+ +
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 240 DRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYV 319 (433)
T ss_dssp ETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEE
T ss_pred ECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEE
Confidence 999998877766666677899999999999887 4889999999988877776666678889999999755 5
Q ss_pred EEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeC---------------CCeEEEeeCCCcEEEEEee
Q 021319 166 LTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSA---------------DSLVSLWDISEMLCVRTFT 230 (314)
Q Consensus 166 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~---------------dg~i~vwd~~~~~~~~~~~ 230 (314)
++..++.+.+|+....+....+. +...+.+++|+|+++++++++. ||.|++||+.+++.+..+.
T Consensus 320 ~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 320 SDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred EecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec
Confidence 55889999999998776665554 6778999999999999888876 5799999999999888876
Q ss_pred ecccCeEEEEEccCCcEEEEecC-CceEEEEECCC
Q 021319 231 KLEWPVRTISFSHTGDYIASASE-DLFIDISNVHT 264 (314)
Q Consensus 231 ~~~~~v~~~~~sp~~~~l~s~s~-d~~v~v~~~~~ 264 (314)
. ...+.+++|+|++++|++++. |+.|++|++..
T Consensus 399 ~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 399 A-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp C-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred C-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 5 446899999999999998875 99999999753
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.1e-31 Score=227.47 Aligned_cols=222 Identities=11% Similarity=0.112 Sum_probs=177.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccC---------CeEeeeec--
Q 021319 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK---------FKPIHRRK-- 147 (314)
Q Consensus 79 ~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~-- 147 (314)
+.++++|+.|++|++||+.+++...... ...+..+.++|+ +++++.|+.+++|+... .+.+....
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 4689999999999999999988776655 233334566776 89999999999997653 33233332
Q ss_pred cCcceeeEEecc--CCCeEEEEcCCceEEEEeCCCCCceeeee-ecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE
Q 021319 148 FGYEVNEIAWNM--TGEMFFLTTGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (314)
Q Consensus 148 ~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~ 224 (314)
+...+.+++|+| +++.+++++.+|.+++|++...+...... .|...+++++|+|++++|++|+.||.|++||++++.
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 235689999999 99999999999999999998877755543 445579999999999999999999999999999888
Q ss_pred EE-EEeee-cccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe----ccCccc--eeEEcCCCCeeEEEec-C
Q 021319 225 CV-RTFTK-LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP----CRAAMN--SVEWNPKYNLLAYAGD-D 295 (314)
Q Consensus 225 ~~-~~~~~-~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~----~~~~i~--~v~~~~~~~~la~~~~-d 295 (314)
.+ ..+.. |..+|.+++|+|++.+|++++.| .|++||+.+++.+..+. +...+. +++|+|++++|++++. |
T Consensus 204 ~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d 282 (343)
T 3lrv_A 204 QASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNES 282 (343)
T ss_dssp SCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTT
T ss_pred CCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCC
Confidence 77 77887 89999999999999999999955 99999999887654432 112344 6999999999999887 5
Q ss_pred CcccccccceEEeccccC
Q 021319 296 KNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~ 313 (314)
+.++||++++
T Consensus 283 --------~~i~v~~~~~ 292 (343)
T 3lrv_A 283 --------NSLTIYKFDK 292 (343)
T ss_dssp --------TEEEEEEECT
T ss_pred --------CcEEEEEEcc
Confidence 5788998743
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.1e-28 Score=201.51 Aligned_cols=278 Identities=14% Similarity=0.121 Sum_probs=191.6
Q ss_pred cEEEEEECCCCC---EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE-EEe--
Q 021319 22 KVHSVAWNCTGT---KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR-LWD-- 95 (314)
Q Consensus 22 ~V~~v~~s~~g~---~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~-iwd-- 95 (314)
.+.++.|-..|- .|++++ ..+|++|+.... ..+.......+|..+|..+.+.|+..+++..+-..-.++ ++-
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla 118 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITAC-EDVVSLWKALDA-WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALF 118 (356)
T ss_dssp EEEEEEEC----CEEEEEEEE-SSEEEEEEESSS-SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEEC
T ss_pred EEeeeeeccCCCCccEEEEec-cceEEEcccCCC-ccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEE
Confidence 456666655443 677777 579999998763 344566788899999999999997766665554433332 221
Q ss_pred --CCCCceeeeEEecCceEEEEEccCCCEEEEEe--CCCcEEEEEccC-CeEeee-eccCcceeeEEecc---CCCeEEE
Q 021319 96 --ARSGKCSQQAELSGENINITYKPDGTHIAVGN--RDDELTILDVRK-FKPIHR-RKFGYEVNEIAWNM---TGEMFFL 166 (314)
Q Consensus 96 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~-~~~~~~-~~~~~~~~~~~~~~---~~~~~~~ 166 (314)
.+.........-.+....+--.++++++.++. .|+.|++|++.. .+.+.. ..+...+..++|++ +++.+++
T Consensus 119 ~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaS 198 (356)
T 2w18_A 119 CSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLG 198 (356)
T ss_dssp C------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEE
T ss_pred ECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEE
Confidence 11000011111111112221125565555543 599999999944 554443 34556788889999 7799999
Q ss_pred EcCCceEEEEeCCCCCceeeeeecc---cceEEEEECCCCCEE------------EEeeCCCeEEEeeCCCcEEEEEee-
Q 021319 167 TTGNGTVEVLTYPSLRPLDTVVAHT---AGCYCIAIDPMGRYF------------AVGSADSLVSLWDISEMLCVRTFT- 230 (314)
Q Consensus 167 ~~~~g~~~~~~~~~~~~~~~~~~~~---~~i~~i~~~~~~~~l------------~t~~~dg~i~vwd~~~~~~~~~~~- 230 (314)
++.|+++++|++.+.+.+.++.+|. ..+.+++|+|+|+++ ++|+.|++|++||..+++++..+.
T Consensus 199 gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 199 TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEE
T ss_pred ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 9999999999999999888887643 357788999999876 668889999999999998876652
Q ss_pred ----ecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe-ccCcc-ceeEEcCCCCeeEEEecCCcccccccc
Q 021319 231 ----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP-CRAAM-NSVEWNPKYNLLAYAGDDKNKYQADEG 304 (314)
Q Consensus 231 ----~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-~~~~i-~~v~~~~~~~~la~~~~d~~~~~~~~~ 304 (314)
+|...+.+ .+.++.++|+++.|+.|+|||+.+++.+.++. |...+ .+|+|||++++||+|+.| +
T Consensus 279 ~~p~Gh~~~~ls--g~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D--------~ 348 (356)
T 2w18_A 279 CLPPGQAGRFLE--GDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKD--------G 348 (356)
T ss_dssp CCCTTCCCCEEE--EEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTT--------S
T ss_pred eccCCCcceeEc--cccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECC--------C
Confidence 34433433 33448899999999999999999999999986 44444 469999999999999988 5
Q ss_pred eEEeccc
Q 021319 305 VFRIYGF 311 (314)
Q Consensus 305 ~~~~~~~ 311 (314)
++|||++
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 8999986
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=5.7e-29 Score=206.66 Aligned_cols=210 Identities=10% Similarity=0.083 Sum_probs=140.5
Q ss_pred ccccEEEEEECCC----CCEEEEee--------------------CCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEE
Q 021319 19 HKKKVHSVAWNCT----GTKLASGS--------------------VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW 74 (314)
Q Consensus 19 H~~~V~~v~~s~~----g~~l~s~~--------------------~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~ 74 (314)
|...|++|+|+|| ++.+++++ .|+.|++|++.+.+ + ....+.+|...+..++|
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG--~-~~~s~~~~~~~v~~l~f 186 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG--G-GKENQFLMPPEETILTF 186 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS--C-EEEEEEECCCSSCEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC--c-eeeeeccCCCceeeEEe
Confidence 3457788888888 77777655 39999999985532 2 22346678888888888
Q ss_pred cC--CCCCEEEEEeCCCcEEEEeCCCCceeeeEEecC----ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeecc
Q 021319 75 DP--KHADLIATASGDKTVRLWDARSGKCSQQAELSG----ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF 148 (314)
Q Consensus 75 ~~--~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 148 (314)
+| .++.+|+|++.|++|||||+.++++...+..+. ....++|+|+|+.+++++.+.. +|+
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w~------------ 252 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KES------------ 252 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------------------
T ss_pred eccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cce------------
Confidence 87 235799999999999999999999888775322 2345789999988755432211 111
Q ss_pred CcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeee-----eecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCc
Q 021319 149 GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTV-----VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM 223 (314)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~ 223 (314)
++++..++++++|+....+.+..+ .+|.....+.++ ++..+|+++.|++|++||+.++
T Consensus 253 ---------------laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tG 315 (356)
T 2w18_A 253 ---------------ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLG 315 (356)
T ss_dssp --------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTC
T ss_pred ---------------eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCC
Confidence 112233333333333332222111 133333333333 3789999999999999999999
Q ss_pred EEEEEeeecccCeE-EEEEccCCcEEEEecCCceEEEEEC
Q 021319 224 LCVRTFTKLEWPVR-TISFSHTGDYIASASEDLFIDISNV 262 (314)
Q Consensus 224 ~~~~~~~~~~~~v~-~~~~sp~~~~l~s~s~d~~v~v~~~ 262 (314)
++++++++|...+. .++|||+|++|+||+.|+.|+|||+
T Consensus 316 k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 316 QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999998876544 6899999999999999999999985
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=9.4e-29 Score=216.31 Aligned_cols=284 Identities=14% Similarity=0.118 Sum_probs=211.4
Q ss_pred ccccEEEEEECCCCC-EEEEee----CCC----cEEEeec--CCCCCCceeeEEeecCCCCEEEEEEcCC----------
Q 021319 19 HKKKVHSVAWNCTGT-KLASGS----VDQ----TARVWHI--EPHGHGKVKDIELRGHADSVDQLCWDPK---------- 77 (314)
Q Consensus 19 H~~~V~~v~~s~~g~-~l~s~~----~D~----~v~iw~~--~~~~~~~~~~~~~~~h~~~v~~l~~~~~---------- 77 (314)
+...++..+|++.|. ++++|+ .|| .++|||+ .++. .+....+.+|...+..+++.+.
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGT--VLAQNSYKVNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTC--EEEEEEEEECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCC--EEeeeEEEcChhHHHHHHHHHHHHHHHHHcCC
Confidence 345788888998885 566776 467 9999999 6532 3334567888888877766541
Q ss_pred ---CCCEEEEEeCC------CcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCC---cEEEEEccCCeEeee
Q 021319 78 ---HADLIATASGD------KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDD---ELTILDVRKFKPIHR 145 (314)
Q Consensus 78 ---~~~~l~s~~~D------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~ 145 (314)
.+..++.++.+ ++|++||...+..............++|+|+|+.|+.++.++ .|.+||+++.+....
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe
Confidence 02355555543 799999998655444444556778899999999999998875 899999998776554
Q ss_pred eccCcceeeEEeccCCCeEE-EEcCCc--eEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeC-CC--eEEEee
Q 021319 146 RKFGYEVNEIAWNMTGEMFF-LTTGNG--TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSA-DS--LVSLWD 219 (314)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~-~~~~~g--~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~-dg--~i~vwd 219 (314)
......+..++|+|+++.++ ++..++ .+++|+....+. ..+..|...+.+++|+|+|++|+.++. ++ .|.+||
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 45556788999999999877 454444 588888876553 456678888999999999999887776 45 677889
Q ss_pred CCCcEEEEEeeecccCeEEEEEccCCcEEEEecCC---ceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCC
Q 021319 220 ISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED---LFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDK 296 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d---~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~ 296 (314)
+.+++. ..+..+...+.+++|+|+|++|++++.+ ..|.+||+.+++.. .+.....+.+++|+|++++|++++.|+
T Consensus 298 ~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 298 INGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTFLDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp TTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSSSCEEEEECTTSSEEEEEEEET
T ss_pred CCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCCCcCCeEEcCCCCEEEEEEcCC
Confidence 887653 3444566678899999999999988864 68999999988764 343334789999999999999999876
Q ss_pred cccccccceEEecccc
Q 021319 297 NKYQADEGVFRIYGFE 312 (314)
Q Consensus 297 ~~~~~~~~~~~~~~~~ 312 (314)
. ...+.+|+++
T Consensus 376 ~-----~~~l~~~d~~ 386 (415)
T 2hqs_A 376 M-----GSVLNLVSTD 386 (415)
T ss_dssp T-----EEEEEEEETT
T ss_pred C-----ccEEEEEECC
Confidence 3 1256666653
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.1e-27 Score=209.49 Aligned_cols=264 Identities=14% Similarity=0.184 Sum_probs=202.6
Q ss_pred eeeecccccEEEEEECC--------------CCCEEEEeeCC------CcEEEeecCCCCCCceeeEEeecCCCCEEEEE
Q 021319 14 REYTGHKKKVHSVAWNC--------------TGTKLASGSVD------QTARVWHIEPHGHGKVKDIELRGHADSVDQLC 73 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~--------------~g~~l~s~~~D------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~ 73 (314)
+.+.+|...++.+++++ .+..++.++.+ +.|++||++.. . ...+.+|...+.+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~---~--~~~l~~~~~~v~~~~ 185 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY---N--QFVVHRSPQPLMSPA 185 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC---S--CEEEEEESSCEEEEE
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC---C--CEEEeCCCCcceeeE
Confidence 55778888888887764 26677776654 79999998642 1 235678999999999
Q ss_pred EcCCCCCEEEEEeCCC---cEEEEeCCCCceeeeEEecCceEEEEEccCCCEEE-EEeCCCc--EEEEEccCCeEeeeec
Q 021319 74 WDPKHADLIATASGDK---TVRLWDARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDE--LTILDVRKFKPIHRRK 147 (314)
Q Consensus 74 ~~~~~~~~l~s~~~D~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~~ 147 (314)
|+|++ +.|++++.|+ .|++||+.++++............++|+|||+.|+ +++.++. |.+||+++.+...-..
T Consensus 186 ~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~ 264 (415)
T 2hqs_A 186 WSPDG-SKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD 264 (415)
T ss_dssp ECTTS-SEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC
T ss_pred EcCCC-CEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC
Confidence 99985 6888888875 99999999988765544555677899999999888 5655554 9999998876544334
Q ss_pred cCcceeeEEeccCCCeEEEEcC-Cc--eEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCC---CeEEEeeCC
Q 021319 148 FGYEVNEIAWNMTGEMFFLTTG-NG--TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD---SLVSLWDIS 221 (314)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~-~g--~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~d---g~i~vwd~~ 221 (314)
+...+..++|+|+++.+++++. ++ .+++|+....+. ..+..+...+.+++|+|+|++|++++.+ ..|.+||+.
T Consensus 265 ~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 265 GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 4567889999999998887775 44 677777766543 3444566778899999999999988765 589999998
Q ss_pred CcEEEEEeeecccCeEEEEEccCCcEEEEecCCc---eEEEEECCCCCeEEEEe-ccCccceeEEcCCCC
Q 021319 222 EMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL---FIDISNVHTGRTVHQIP-CRAAMNSVEWNPKYN 287 (314)
Q Consensus 222 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~---~v~v~~~~~~~~~~~~~-~~~~i~~v~~~~~~~ 287 (314)
+++.. .+..+. .+.+++|+|+|++|++++.|+ .|.+||+.. +.+..+. +.+.|.+++|+|..+
T Consensus 344 ~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g-~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 344 TGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG-RFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp TCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS-CCEEECCCSSSEEEEEEECCCCC
T ss_pred CCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC-CcEEEeeCCCCCCcCCccccccc
Confidence 87763 454454 789999999999999998876 799999874 4455554 457899999999643
No 128
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=2.6e-26 Score=194.49 Aligned_cols=274 Identities=11% Similarity=0.086 Sum_probs=200.6
Q ss_pred EECCCCCE-EEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCce-eee
Q 021319 27 AWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC-SQQ 104 (314)
Q Consensus 27 ~~s~~g~~-l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~-~~~ 104 (314)
.|.+++++ +++++.++.|++||.++.. .. ..+..+...+ .++|+|++..+++++..++.|.+||..+++. ...
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~---~~-~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLE---IL-NQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA 78 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCC---EE-EEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccc---ee-eeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence 45666555 7888899999999987632 22 2333445556 9999998654555556689999999998887 666
Q ss_pred EEecCceEE-EEEccCCCEEEEEeCCC---cEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEE-cCCce-EEEEeC
Q 021319 105 AELSGENIN-ITYKPDGTHIAVGNRDD---ELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT-TGNGT-VEVLTY 178 (314)
Q Consensus 105 ~~~~~~~~~-~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~-~~~~~~ 178 (314)
......... ++++|++++++++..++ .|.+||+.+.+.+...........++|+|+++.++++ ..++. +.+|++
T Consensus 79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 79 IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp EEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 666666666 99999999999655553 8999999998888777777778999999999865554 55577 999998
Q ss_pred CCCCce----eeeeecccceEEEEECCCCCEEE-EeeCCCeEEEeeCCCcEE---EEEeeecccCeEEEEEccCCcEEEE
Q 021319 179 PSLRPL----DTVVAHTAGCYCIAIDPMGRYFA-VGSADSLVSLWDISEMLC---VRTFTKLEWPVRTISFSHTGDYIAS 250 (314)
Q Consensus 179 ~~~~~~----~~~~~~~~~i~~i~~~~~~~~l~-t~~~dg~i~vwd~~~~~~---~~~~~~~~~~v~~~~~sp~~~~l~s 250 (314)
.....+ .........+..++|+|+|++++ ++..++.|++||+.+++. +..+... ..+..++|+|+|++|+.
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v 237 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYV 237 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEE
Confidence 653332 11223345689999999999655 455688999999988776 6666543 45788999999997765
Q ss_pred ec-CCceEEEEECCCCCe--EEEEecc-----C---ccceeEEcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 251 AS-EDLFIDISNVHTGRT--VHQIPCR-----A---AMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 251 ~s-~d~~v~v~~~~~~~~--~~~~~~~-----~---~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
++ .++.|.+||..+++. +..+... . ..+.++|+|+++.|++++.+. |+++||+++.
T Consensus 238 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-------~~v~v~d~~~ 304 (331)
T 3u4y_A 238 LTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS-------RELKVFTISG 304 (331)
T ss_dssp ECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT-------TEEEEEETTS
T ss_pred EEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC-------CcEEEEEecC
Confidence 54 578899999998877 4433322 1 135689999999988777653 6888998854
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=1.5e-26 Score=208.48 Aligned_cols=281 Identities=11% Similarity=0.082 Sum_probs=213.5
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcC----CCCCEEEEEe-CCCcEEEEeCC
Q 021319 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP----KHADLIATAS-GDKTVRLWDAR 97 (314)
Q Consensus 23 V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~----~~~~~l~s~~-~D~~v~iwd~~ 97 (314)
++.++|+|||++|++++.|++|++||+.... .. ....+. +...+..++|+| ++ +++++++ .+++|.+||..
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t-~~-~~~~i~-~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKE-PT-KVAEIK-IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSS-CE-EEEEEE-CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETT
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCC-Cc-EEEEEe-cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEecc
Confidence 8999999999999999999999999993111 11 222344 445678999999 75 5666666 58999999999
Q ss_pred CCceeeeEEec------------CceEEEEEccCCCEE-EEEeCCCcEEEEEccCCeEee--eeccCcceeeEEeccCCC
Q 021319 98 SGKCSQQAELS------------GENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIH--RRKFGYEVNEIAWNMTGE 162 (314)
Q Consensus 98 ~~~~~~~~~~~------------~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~ 162 (314)
++++...+... .....+.++|++..+ ++...++.|.+||....+.+. .+..+..+..+.|+|+++
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 99887766542 145678899977655 456678899999998754333 444556678899999999
Q ss_pred eEEEE-cCCceEEEEeCCCCCceeeeee----cccceEEEEECCC-CCEEEEee-CCCeEEEeeCCC-------cEEEEE
Q 021319 163 MFFLT-TGNGTVEVLTYPSLRPLDTVVA----HTAGCYCIAIDPM-GRYFAVGS-ADSLVSLWDISE-------MLCVRT 228 (314)
Q Consensus 163 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~----~~~~i~~i~~~~~-~~~l~t~~-~dg~i~vwd~~~-------~~~~~~ 228 (314)
+++++ ..++++.+|+..+.+.+..+.. |.+....+ ++|+ +.+++++. .|++|.+||+.+ ++++++
T Consensus 337 ~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 87665 4688999999988877666653 54433333 4676 66777775 589999999988 899999
Q ss_pred eeecccCeEEEEEccCCcEEEEecC-------CceEEEEECCCCCeE-EEEe---------ccCccceeEEcCCCCeeEE
Q 021319 229 FTKLEWPVRTISFSHTGDYIASASE-------DLFIDISNVHTGRTV-HQIP---------CRAAMNSVEWNPKYNLLAY 291 (314)
Q Consensus 229 ~~~~~~~v~~~~~sp~~~~l~s~s~-------d~~v~v~~~~~~~~~-~~~~---------~~~~i~~v~~~~~~~~la~ 291 (314)
+..+...+..++|+|++++|++++. +..|.|||+.+++.. ..++ +...+..++|+|+|..+++
T Consensus 416 l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 495 (543)
T 1nir_A 416 LQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWF 495 (543)
T ss_dssp EECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEE
T ss_pred EEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEE
Confidence 9988877888999999999999872 679999999998877 4442 2457889999999999887
Q ss_pred Eec-CCcccccccceEEecccc
Q 021319 292 AGD-DKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 292 ~~~-d~~~~~~~~~~~~~~~~~ 312 (314)
+.- .++ ++++|.|||.+
T Consensus 496 s~~~~~~----~~~~i~v~D~~ 513 (543)
T 1nir_A 496 SVWNGKN----DSSALVVVDDK 513 (543)
T ss_dssp EEECCTT----SCCEEEEEETT
T ss_pred EeecCCC----CCCeEEEEECC
Confidence 632 111 35788888864
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=1.1e-25 Score=192.05 Aligned_cols=270 Identities=10% Similarity=0.059 Sum_probs=212.8
Q ss_pred ccccEEEEEECCCCCEEEEeeC-------CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 19 HKKKVHSVAWNCTGTKLASGSV-------DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 19 H~~~V~~v~~s~~g~~l~s~~~-------D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
....+..++|+|+|+++++++. ++.|.+||.++.. ... .+. ....+..++|+|++..++++...++.|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~--~~~--~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE--VTQ--AIH-NDLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC--EEE--EEE-ESSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe--EEE--EEe-cCCCcceEEECCCCCEEEEEecCCCEE
Confidence 3457889999999998888774 5689999987532 222 222 234467889999876566777778999
Q ss_pred EEEeCCCCceeeeEEecC----------ceEEEEEccCCCEEEEEe--CCCcEEEEEccCCeEeeeec-cCcceeeEEec
Q 021319 92 RLWDARSGKCSQQAELSG----------ENINITYKPDGTHIAVGN--RDDELTILDVRKFKPIHRRK-FGYEVNEIAWN 158 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~ 158 (314)
.+||..+++......... ....+.++|+++.++++. .++.|.+||+.+.+.+.... .+..+..++|+
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALD 193 (353)
T ss_dssp EEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEE
T ss_pred EEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEEC
Confidence 999999998777665532 146789999999888776 47789999999988887776 55568889999
Q ss_pred cCCCeEEEEcCCceEEEEeCCCCCceeeeee----cccceEEEEECCCCCEEEEeeC-CCeEEEeeCCCcEEEEEeeecc
Q 021319 159 MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA----HTAGCYCIAIDPMGRYFAVGSA-DSLVSLWDISEMLCVRTFTKLE 233 (314)
Q Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~i~~i~~~~~~~~l~t~~~-dg~i~vwd~~~~~~~~~~~~~~ 233 (314)
|+++.++++..++.+.+|+....+....+.. +...+..++|+|+++++++++. ++.|.+||..+++.+..+....
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 9999999999999999999988776655543 4456788999999997776655 4899999999988877765433
Q ss_pred cCeEEEEEccCCcEEEEe-cCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecC
Q 021319 234 WPVRTISFSHTGDYIASA-SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 234 ~~v~~~~~sp~~~~l~s~-s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d 295 (314)
+ ..++|+|++++++.+ ..++.|.+||..+++.+..+.....+.+++|+|+++.|+.+..+
T Consensus 274 -~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 274 -S-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -C-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred -C-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 2 569999999965555 47899999999999998888877789999999999977666654
No 131
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.8e-28 Score=227.66 Aligned_cols=213 Identities=21% Similarity=0.247 Sum_probs=171.4
Q ss_pred ceeeecccccEEEEEECCC--CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCC-CCEEEEEeCCC
Q 021319 13 SREYTGHKKKVHSVAWNCT--GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKH-ADLIATASGDK 89 (314)
Q Consensus 13 ~~~~~gH~~~V~~v~~s~~--g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~D~ 89 (314)
...+.+|.+.|++++|+|+ +++|++|+.||.|++||+.... ......+.+|...|.+++|+|+. ++++++|+.|+
T Consensus 46 ~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 46 IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR--WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp EEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc--ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 4567899999999999998 9999999999999999997532 12344677899999999999973 57999999999
Q ss_pred cEEEEeCCCCceeeeE---EecCceEEEEEcc-------------CCCEEEEEeCCCcEEEEEccCCeEeeeeccCccee
Q 021319 90 TVRLWDARSGKCSQQA---ELSGENINITYKP-------------DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVN 153 (314)
Q Consensus 90 ~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 153 (314)
.|++||++++...... .....+.+++|+| ++..+++++.|+.|++||++......
T Consensus 124 ~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~--------- 194 (753)
T 3jro_A 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY--------- 194 (753)
T ss_dssp EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE---------
T ss_pred cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc---------
Confidence 9999999887433222 2345567889998 58888999999999999886532110
Q ss_pred eEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCC---CCEEEEeeCCCeEEEeeCCCcE-----E
Q 021319 154 EIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPM---GRYFAVGSADSLVSLWDISEML-----C 225 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~---~~~l~t~~~dg~i~vwd~~~~~-----~ 225 (314)
.....+.+|...|++++|+|+ ++++++++.||.|++||+.++. .
T Consensus 195 ----------------------------~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 246 (753)
T 3jro_A 195 ----------------------------VLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT 246 (753)
T ss_dssp ----------------------------EEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCC
T ss_pred ----------------------------eeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeE
Confidence 112344578899999999999 8999999999999999998753 2
Q ss_pred EEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCC
Q 021319 226 VRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 226 ~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~ 264 (314)
+.....+...|.+++|+|++++|++++.||.|++|++.+
T Consensus 247 ~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 247 LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp BSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 223345777899999999999999999999999999874
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=5e-26 Score=193.27 Aligned_cols=268 Identities=13% Similarity=0.196 Sum_probs=189.5
Q ss_pred EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC-CcEEEEeCC--CCcee--eeEEec
Q 021319 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD-KTVRLWDAR--SGKCS--QQAELS 108 (314)
Q Consensus 34 ~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D-~~v~iwd~~--~~~~~--~~~~~~ 108 (314)
.+++++.|+.|++|+++.. +.........|...+..++|+|++ ++|++++.+ +.|++|++. ++... ......
T Consensus 7 l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHE--GALTLTQVVDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTT--SCEEEEEEEECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCC--CcEEEeeeEecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 4555578999999999642 222233334577889999999985 566666665 999999987 55533 233334
Q ss_pred CceEEEEEccCCCEEEEEeC-CCcEEEEEc---cCCeEeeeeccCcceeeEEeccCCCeEEEEc-CCceEEEEeCCC-CC
Q 021319 109 GENINITYKPDGTHIAVGNR-DDELTILDV---RKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT-GNGTVEVLTYPS-LR 182 (314)
Q Consensus 109 ~~~~~~~~~~~~~~l~~~~~-d~~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~ 182 (314)
.....++|+|+++.+++++. ++.+.+||+ ...+.+........+..++|+|+++.++++. .++.+.+|++.. .+
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 45667999999998877665 788999999 4444555555556688899999999887776 889999999876 33
Q ss_pred cee----eeee-cccceEEEEECCCCCEEEEe-eCCCeEEEeeCCC--cE--EEEEeeec------ccCeEEEEEccCCc
Q 021319 183 PLD----TVVA-HTAGCYCIAIDPMGRYFAVG-SADSLVSLWDISE--ML--CVRTFTKL------EWPVRTISFSHTGD 246 (314)
Q Consensus 183 ~~~----~~~~-~~~~i~~i~~~~~~~~l~t~-~~dg~i~vwd~~~--~~--~~~~~~~~------~~~v~~~~~sp~~~ 246 (314)
... .... ....+..++|+|++++++++ ..++.|.+||+.. +. ....+... ...+..++|+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~ 243 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGR 243 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSS
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCC
Confidence 221 2222 23468899999999976554 4789999999953 32 23333211 22466899999998
Q ss_pred EEE-EecCCceEEEEECC--CC--CeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 247 YIA-SASEDLFIDISNVH--TG--RTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 247 ~l~-s~s~d~~v~v~~~~--~~--~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
+|+ +...|+.|.+|++. ++ +.+..+.....+.+++|+|++++|++++.+ +|.++||.+
T Consensus 244 ~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~v~v~~~ 306 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQK-------SHHISVYEI 306 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTT-------TCEEEEEEE
T ss_pred EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCC-------CCeEEEEEE
Confidence 877 55689999999998 33 344445555569999999999988887743 256667754
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=1.6e-25 Score=201.85 Aligned_cols=278 Identities=12% Similarity=0.068 Sum_probs=212.2
Q ss_pred EECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEee-cCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeC--CCCceee
Q 021319 27 AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-GHADSVDQLCWDPKHADLIATASGDKTVRLWDA--RSGKCSQ 103 (314)
Q Consensus 27 ~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~--~~~~~~~ 103 (314)
.|+|++..+++++.|++|++||..+.. . ...+. ++. +..++++|++ ++|++++.|++|++||+ .++++..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~---~-~~~i~~g~~--~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK---I-VKVIDTGYA--VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC---E-EEEEECSTT--EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce---E-EEEEecCcc--cceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEEE
Confidence 378999999999999999999987532 2 22344 443 8899999985 68899999999999999 7888877
Q ss_pred eEEecCceEEEEEcc----CCCEEEEEe-CCCcEEEEEccCCeEeeeeccC------------cceeeEEeccCCCeEE-
Q 021319 104 QAELSGENINITYKP----DGTHIAVGN-RDDELTILDVRKFKPIHRRKFG------------YEVNEIAWNMTGEMFF- 165 (314)
Q Consensus 104 ~~~~~~~~~~~~~~~----~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~- 165 (314)
.+........++|+| +|++++++. .++++.+||..+.+++..+... ..+..+.+++++..++
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred EEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 777666778899999 999999887 4899999999998887765431 2467888999776655
Q ss_pred EEcCCceEEEEeCCCCCcee-eeeecccceEEEEECCCCCEEEEe-eCCCeEEEeeCCCcEEEEEeee----cccCeEEE
Q 021319 166 LTTGNGTVEVLTYPSLRPLD-TVVAHTAGCYCIAIDPMGRYFAVG-SADSLVSLWDISEMLCVRTFTK----LEWPVRTI 239 (314)
Q Consensus 166 ~~~~~g~~~~~~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~l~t~-~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~ 239 (314)
....++.+.+|+....+.+. ....+...+..++|+|+|++++++ ..+++|.+||..+++++.++.. |......+
T Consensus 297 s~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~ 376 (543)
T 1nir_A 297 NVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF 376 (543)
T ss_dssp EETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE
T ss_pred EECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc
Confidence 45678999999987765443 122455668889999999986655 4578999999999998888764 33222333
Q ss_pred EEccC-CcEEEEec-CCceEEEEECCC-------CCeEEEEec-cCccceeEEcCCCCeeEEEecCCcccccccceEEec
Q 021319 240 SFSHT-GDYIASAS-EDLFIDISNVHT-------GRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIY 309 (314)
Q Consensus 240 ~~sp~-~~~l~s~s-~d~~v~v~~~~~-------~~~~~~~~~-~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~ 309 (314)
++|+ +.+++|++ .|+.|.+||+.+ ++.++.++. ...+..|+|||+++.|++++.-..-. -.+++++||
T Consensus 377 -~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~-~~~~~v~v~ 454 (543)
T 1nir_A 377 -VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDA-RISQSVAVF 454 (543)
T ss_dssp -EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSH-HHHTCEEEE
T ss_pred -CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCc-ccCceEEEE
Confidence 4687 67777776 689999999988 888888875 45788999999999999876311000 014688888
Q ss_pred cccC
Q 021319 310 GFEN 313 (314)
Q Consensus 310 ~~~~ 313 (314)
+++.
T Consensus 455 d~~~ 458 (543)
T 1nir_A 455 DLKN 458 (543)
T ss_dssp ETTC
T ss_pred ECCC
Confidence 8753
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.9e-25 Score=189.62 Aligned_cols=269 Identities=14% Similarity=0.122 Sum_probs=187.1
Q ss_pred ecccccEEEEEECCCCCEEEEeeCC-CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSVD-QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~D-~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd 95 (314)
..|...+.+++|+|+|++|++++.+ +.|++|+++...........+..+. .+..++|+|++..+++++..++.|.+||
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 3467789999999999998888876 9999999973222222222333333 7889999998654445555689999999
Q ss_pred CCCC---ceeeeEEecCceEEEEEccCCCEEEEEe-CCCcEEEEEccC-CeEee------eeccCcceeeEEeccCCCeE
Q 021319 96 ARSG---KCSQQAELSGENINITYKPDGTHIAVGN-RDDELTILDVRK-FKPIH------RRKFGYEVNEIAWNMTGEMF 164 (314)
Q Consensus 96 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~ 164 (314)
+..+ ..............++|+|+++.++++. .++.+.+||+.. .+... ....+..+..++|+|+++.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l 192 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 192 (343)
T ss_dssp EETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred CCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEE
Confidence 9433 3333333344566789999999888877 889999999986 43321 12234467789999999976
Q ss_pred EEE-cCCceEEEEeCCC--CCc--eeeee----ec--ccceEEEEECCCCCEEE-EeeCCCeEEEeeCC----CcEEEEE
Q 021319 165 FLT-TGNGTVEVLTYPS--LRP--LDTVV----AH--TAGCYCIAIDPMGRYFA-VGSADSLVSLWDIS----EMLCVRT 228 (314)
Q Consensus 165 ~~~-~~~g~~~~~~~~~--~~~--~~~~~----~~--~~~i~~i~~~~~~~~l~-t~~~dg~i~vwd~~----~~~~~~~ 228 (314)
+++ ..++.+.+|+... .+. ..... .+ ...+..++|+|++++|+ ++..++.|.+||+. +.+.+..
T Consensus 193 ~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 193 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeee
Confidence 555 4789999999853 221 11111 11 23466899999998877 45578999999998 3445555
Q ss_pred eeecccCeEEEEEccCCcEEEEec-CCceEEEEEC--CCCC--eEEEEeccCccceeEEcCCCC
Q 021319 229 FTKLEWPVRTISFSHTGDYIASAS-EDLFIDISNV--HTGR--TVHQIPCRAAMNSVEWNPKYN 287 (314)
Q Consensus 229 ~~~~~~~v~~~~~sp~~~~l~s~s-~d~~v~v~~~--~~~~--~~~~~~~~~~i~~v~~~~~~~ 287 (314)
+..... +..++|+|++++|++++ .|+.+.+|++ .+++ .+..++......+++|.|+.+
T Consensus 273 ~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 273 QPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp EECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred ecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence 544444 88899999999888887 6899999954 4553 334455555677888887543
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=2e-25 Score=189.02 Aligned_cols=263 Identities=12% Similarity=0.078 Sum_probs=200.5
Q ss_pred CEEEEeeCCCcEEEeecCCCCCCceeeEEee-cCCC-CEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecC-
Q 021319 33 TKLASGSVDQTARVWHIEPHGHGKVKDIELR-GHAD-SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG- 109 (314)
Q Consensus 33 ~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~-~h~~-~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~- 109 (314)
++|++++.++.|++||+.+.. ... .+. ++.. .+..++|+|++..++++++.++.|.+||+.+++.........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~--~~~--~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA--VDK--VITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE--EEE--EEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCc--EEE--EEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 478999999999999987531 111 222 2222 477899999875566777788999999999988776665433
Q ss_pred -----ceEEEEEccCCCEEEEEe------------CCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEEcCCce
Q 021319 110 -----ENINITYKPDGTHIAVGN------------RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGT 172 (314)
Q Consensus 110 -----~~~~~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 172 (314)
....++|+|+++.++++. .++.|.+||+.+.+.+.....+..+..++|+|+++.++++ ++.
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~ 155 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRD 155 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSS
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCe
Confidence 445689999999998886 5789999999988887777666678889999999988877 688
Q ss_pred EEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCC------------------------eEEEeeCCCcEEE-E
Q 021319 173 VEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADS------------------------LVSLWDISEMLCV-R 227 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg------------------------~i~vwd~~~~~~~-~ 227 (314)
+.+|+....+....+..+.. ...+.|+|+++.++..+.++ .|.+||+.+++.. .
T Consensus 156 i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp EEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred EEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 99999987766555443321 11237899988765544332 4689999887654 2
Q ss_pred EeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEE
Q 021319 228 TFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFR 307 (314)
Q Consensus 228 ~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~ 307 (314)
.+..+...+..++|+|++++|+++ ++.|.+||..+++.+..+.....+.+++|+|+++.|++++.+ +.++
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--------~~i~ 304 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGAL--------GDLA 304 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBS--------SEEE
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCC--------CcEE
Confidence 333455568889999999999988 789999999999888888777789999999999988887654 5777
Q ss_pred ecccc
Q 021319 308 IYGFE 312 (314)
Q Consensus 308 ~~~~~ 312 (314)
||+++
T Consensus 305 v~d~~ 309 (337)
T 1pby_B 305 AYDAE 309 (337)
T ss_dssp EEETT
T ss_pred EEECc
Confidence 88774
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=7.2e-26 Score=212.02 Aligned_cols=278 Identities=9% Similarity=0.092 Sum_probs=201.8
Q ss_pred cccEEEEEECCCCCEEEEeeC-CC-----cEEEeecCCCCCCceeeEEeecCC------------------------CCE
Q 021319 20 KKKVHSVAWNCTGTKLASGSV-DQ-----TARVWHIEPHGHGKVKDIELRGHA------------------------DSV 69 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~-D~-----~v~iw~~~~~~~~~~~~~~~~~h~------------------------~~v 69 (314)
...|.+++|||||++|++++. |+ .|++||++... .. ..+..+. ..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ---TR-LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC---EE-EEECGGGTC--------------------CCEES
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc---ee-EccchhhcccccccccchhhhhhhhhhhccccCc
Confidence 456999999999999999998 88 89999987532 11 1222222 237
Q ss_pred EEEEEcCCCCCEEEEEeCCCcEEEEeCCCC---ceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee
Q 021319 70 DQLCWDPKHADLIATASGDKTVRLWDARSG---KCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR 146 (314)
Q Consensus 70 ~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 146 (314)
..++|+|++ +.|++++. +.|.+||+.++ ..............++|+|||+.|+.++ ++.|.+||+...+.....
T Consensus 112 ~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 112 VDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp CCCEECTTS-SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC
T ss_pred ceeEECCCC-CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec
Confidence 889999985 57777776 99999999888 5444333345667899999999999887 468999999887655433
Q ss_pred ccCcc-----------------eeeEEeccCCCeEEEEcCCc---------------------------------eEEEE
Q 021319 147 KFGYE-----------------VNEIAWNMTGEMFFLTTGNG---------------------------------TVEVL 176 (314)
Q Consensus 147 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~g---------------------------------~~~~~ 176 (314)
..... +..+.|+|+++.++++..++ .+.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 22211 47799999999988876543 77778
Q ss_pred eCCC-CCceeeee--ecccceEEEEECCCCCEEEEeeC-----CCeEEEeeCCCcEEEEEeeeccc----CeEEEEEccC
Q 021319 177 TYPS-LRPLDTVV--AHTAGCYCIAIDPMGRYFAVGSA-----DSLVSLWDISEMLCVRTFTKLEW----PVRTISFSHT 244 (314)
Q Consensus 177 ~~~~-~~~~~~~~--~~~~~i~~i~~~~~~~~l~t~~~-----dg~i~vwd~~~~~~~~~~~~~~~----~v~~~~~sp~ 244 (314)
+... .+...... .|...+..++| |||++|+.++. +..|.+||+.++++...+..+.. .+..++|+||
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Confidence 8766 55433222 36677899999 99999887654 56899999998887766655432 4568899999
Q ss_pred CcEEEEecCCceEEEEECC-CCCeEEEEe-ccCcccee-EEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 245 GDYIASASEDLFIDISNVH-TGRTVHQIP-CRAAMNSV-EWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 245 ~~~l~s~s~d~~v~v~~~~-~~~~~~~~~-~~~~i~~v-~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
|+++++++.|+.+++|.+. .++ ...+. +...+.++ +|+|+++.|++.+.+.. ..+++||.+
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~-----~~~~~l~~~ 411 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIES-----ARESQIYAV 411 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSC-----TTCBEEEEE
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCC-----CceEEEEEE
Confidence 9999999999988888765 444 55544 34467777 69999988766654421 125666654
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1e-25 Score=187.01 Aligned_cols=252 Identities=14% Similarity=0.158 Sum_probs=188.0
Q ss_pred EeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC-CceeeeEEec--CceEE
Q 021319 37 SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS-GKCSQQAELS--GENIN 113 (314)
Q Consensus 37 s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~-~~~~~~~~~~--~~~~~ 113 (314)
+++.|+.|++||+... . ...+..|...|.+++|+|++ ++|++++ ++.|.+||+.+ ++........ .....
T Consensus 17 ~~~~~~~i~~~d~~~~---~--~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 89 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR---K--MRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNND 89 (297)
T ss_dssp -CCCCEEEEEEETTTT---E--EEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSC
T ss_pred CCCcceeEEEEeCCCC---c--eeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccc
Confidence 4578999999998753 1 22456789999999999985 5777766 78999999998 7665443322 23456
Q ss_pred EEEccCCCEEEEEe--CCCcEEEEEc--cCCeEeeeeccCcceeeEEeccCCCeEE-EEcCCceEEEEeCCC-CCceeee
Q 021319 114 ITYKPDGTHIAVGN--RDDELTILDV--RKFKPIHRRKFGYEVNEIAWNMTGEMFF-LTTGNGTVEVLTYPS-LRPLDTV 187 (314)
Q Consensus 114 ~~~~~~~~~l~~~~--~d~~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~-~~~~~~~ 187 (314)
++|+|+++.|+++. .++...+|.+ ...+ .........+..++|+|+++.++ ++..++.+.+|.+.. ......+
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc
Confidence 89999999999998 3345555544 4433 23333334578889999999877 566788888888532 2334455
Q ss_pred eecccceEEEEECCCCCEEEEee-CCCeEEEeeCC-CcEEEEEeeecccCeEEEEEccCCcEEEEecCC-----------
Q 021319 188 VAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDIS-EMLCVRTFTKLEWPVRTISFSHTGDYIASASED----------- 254 (314)
Q Consensus 188 ~~~~~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d----------- 254 (314)
..+...+.+++|+|++++++.++ .++.+++|++. ....+..+..+...+..++|+|++++|++++.+
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 56778899999999999887665 58899999885 445566677777788999999999999988876
Q ss_pred ceEEEEECCCCCeEEE--E-eccCccceeEEcCCCCeeEEEecCC
Q 021319 255 LFIDISNVHTGRTVHQ--I-PCRAAMNSVEWNPKYNLLAYAGDDK 296 (314)
Q Consensus 255 ~~v~v~~~~~~~~~~~--~-~~~~~i~~v~~~~~~~~la~~~~d~ 296 (314)
..|.+||+.+++.... + .+...+.+++|+|+++.|++++.|.
T Consensus 249 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred eEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988765332 2 3456899999999999999988774
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=4.4e-25 Score=205.64 Aligned_cols=278 Identities=12% Similarity=0.110 Sum_probs=202.1
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC--
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS-- 98 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~-- 98 (314)
..|.+++|||| ..++.+. |+.|++||+... . ...+..+...+..++|+|++ +.|+++ .|+.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~---~--~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLAR---K--VTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTT---E--EEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTT
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCC---c--eEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCccc
Confidence 56999999999 6655553 599999998652 1 23455677788899999986 567664 689999999988
Q ss_pred ---CceeeeEEecCc---------------eEEEEEccCCCEEEEEe---------------------------------
Q 021319 99 ---GKCSQQAELSGE---------------NINITYKPDGTHIAVGN--------------------------------- 127 (314)
Q Consensus 99 ---~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~--------------------------------- 127 (314)
++.......... ...+.|+|||+.|++++
T Consensus 153 ~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 153 EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 765543322222 25688999999999887
Q ss_pred CCCcEEEEEccCCeEeeee---ccCcceeeEEeccCCCeEEEEcCCc-----eEEEEeCCCCCceeeee--eccc---ce
Q 021319 128 RDDELTILDVRKFKPIHRR---KFGYEVNEIAWNMTGEMFFLTTGNG-----TVEVLTYPSLRPLDTVV--AHTA---GC 194 (314)
Q Consensus 128 ~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~--~~~~---~i 194 (314)
.+..+.+||+.+.+..... .....+..++|+|+++.++++..++ .+.+|+..+.+....+. .+.. .+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 3457999999887654332 2234578899999999888876554 88999987763333332 1221 23
Q ss_pred EEEEECC--CCCEEEEeeCCCeEEEeeCC-CcEEEEEeeecccCeEE-EEEccCCcEEEEec-CCc----eEEEEECCCC
Q 021319 195 YCIAIDP--MGRYFAVGSADSLVSLWDIS-EMLCVRTFTKLEWPVRT-ISFSHTGDYIASAS-EDL----FIDISNVHTG 265 (314)
Q Consensus 195 ~~i~~~~--~~~~l~t~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~~-~~~sp~~~~l~s~s-~d~----~v~v~~~~~~ 265 (314)
..++|+| +|+++++++.|+.+++|++. ++..+..+..+...+.. ++|+|+++.|+.++ .++ .|..|+..++
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 6789999 99999999999999999886 66677778778888877 79999998876554 444 6777787776
Q ss_pred CeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 266 RTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 266 ~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+ +..+.+...+.+++|+|+++.|++...+.. .-+++.+|+++
T Consensus 393 ~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~----~p~~i~l~d~~ 434 (706)
T 2z3z_A 393 K-TKDLTPESGMHRTQLSPDGSAIIDIFQSPT----VPRKVTVTNIG 434 (706)
T ss_dssp C-CEESCCSSSEEEEEECTTSSEEEEEEECSS----CSCEEEEEESS
T ss_pred C-ceeccCCCceEEEEECCCCCEEEEEecCCC----CCcEEEEEECC
Confidence 5 445556667899999999999887765432 12456666653
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=3.3e-25 Score=202.11 Aligned_cols=262 Identities=10% Similarity=-0.000 Sum_probs=194.8
Q ss_pred ccccEEEEEECCCCCEEEEeeC-CCcEEEeecCCCCCCceeeEEeecCC-CCEEEEEEcCCCCCEEEEEeC---CCcEEE
Q 021319 19 HKKKVHSVAWNCTGTKLASGSV-DQTARVWHIEPHGHGKVKDIELRGHA-DSVDQLCWDPKHADLIATASG---DKTVRL 93 (314)
Q Consensus 19 H~~~V~~v~~s~~g~~l~s~~~-D~~v~iw~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~---D~~v~i 93 (314)
+..+|++++|+|||++|++++. ||+++||+++.. . ...+..|. ..+..++|+|+ .++++++. +...++
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g---~--~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG---E--TVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHAL 92 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT---E--EEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCC---C--cEeeecccccccccccCCCC--eEEEEeccCCCCcceEE
Confidence 3668999999999999999887 999999998532 2 22445555 57999999987 57777765 566677
Q ss_pred EeCCC---CceeeeEEecCceEEEEEccCCCE-EEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEEcC
Q 021319 94 WDARS---GKCSQQAELSGENINITYKPDGTH-IAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTG 169 (314)
Q Consensus 94 wd~~~---~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (314)
|.+.. +... ...........+|+|+++. +++...++.+.+||+.+.+......... ..++|+|+|+.++++..
T Consensus 93 ~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 93 FKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp EEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEE
T ss_pred EEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEE
Confidence 65432 2222 2211222335578888864 3444455566699998876544333222 78899999999997766
Q ss_pred C----ceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCC--eEEEeeCCCcEEEEEeeecccCeEEEE---
Q 021319 170 N----GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADS--LVSLWDISEMLCVRTFTKLEWPVRTIS--- 240 (314)
Q Consensus 170 ~----g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg--~i~vwd~~~~~~~~~~~~~~~~v~~~~--- 240 (314)
+ +.+++|+..+.+. ..+..|...+..++|+|||+.|++++.++ .|.+||+.+++.. .+..+...+..++
T Consensus 170 ~~~~~~~i~~~d~~~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp EETTEEEEEEEETTTCCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred cCCCCeEEEEEcCCCCCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 5 7788888776654 35667888899999999999999888888 8999999988776 6666666666666
Q ss_pred -----EccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCc
Q 021319 241 -----FSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN 297 (314)
Q Consensus 241 -----~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~ 297 (314)
|+|||.++++++.|+.+++|++ |+.+. ...+.+.+++|+ ++.++++++.+..
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTSLST 304 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTE
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcCCCC
Confidence 9999999999999999999999 65544 234678899999 9999998887753
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.8e-24 Score=202.61 Aligned_cols=267 Identities=12% Similarity=0.142 Sum_probs=199.8
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCce
Q 021319 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKC 101 (314)
Q Consensus 22 ~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~ 101 (314)
.|.+++|||||++|++++. +.|++||++....... ..+..|...+..++|+|++ +.|+.++ ++.|.+||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~--~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAV--RQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSC--CBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceE--EEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCCCE
Confidence 3789999999999999986 9999999976410011 2456788889999999985 5777776 46999999988875
Q ss_pred eeeEEecCc-----------------eEEEEEccCCCEEEEEeCCC---------------------------------c
Q 021319 102 SQQAELSGE-----------------NINITYKPDGTHIAVGNRDD---------------------------------E 131 (314)
Q Consensus 102 ~~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~d~---------------------------------~ 131 (314)
......... ...+.|+|||+.|+.++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 543322221 24589999999999887665 7
Q ss_pred EEEEEccC-CeEeeee---ccCcceeeEEeccCCCeEEEEcC-----CceEEEEeCCCCCceeeeeeccc----ceEEEE
Q 021319 132 LTILDVRK-FKPIHRR---KFGYEVNEIAWNMTGEMFFLTTG-----NGTVEVLTYPSLRPLDTVVAHTA----GCYCIA 198 (314)
Q Consensus 132 i~i~d~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~----~i~~i~ 198 (314)
|.+||+.+ .+..... .....+..++| |+++.+++... +..+.+|+..+.+....+..+.. .+..++
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 88889877 6543322 23456788999 99998887653 56788899887765555544443 346889
Q ss_pred ECCCCCEEEEeeCCCeEEEeeCC-CcEEEEEeeecccCeEEE-EEccCCcEEE-EecCCc--eEEEEECCC-CCeEEEEe
Q 021319 199 IDPMGRYFAVGSADSLVSLWDIS-EMLCVRTFTKLEWPVRTI-SFSHTGDYIA-SASEDL--FIDISNVHT-GRTVHQIP 272 (314)
Q Consensus 199 ~~~~~~~l~t~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~~~-~~sp~~~~l~-s~s~d~--~v~v~~~~~-~~~~~~~~ 272 (314)
|+|||+++++++.||.+++|.+. ++. ...+..+...+..+ +|+|+++.|+ +++.|+ .+++|++.. ++.+..+.
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS 422 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence 99999999999999988888765 344 67777888888887 5999998775 555555 899999864 55566665
Q ss_pred ccCccceeEEcCCCCeeEEEecC
Q 021319 273 CRAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 273 ~~~~i~~v~~~~~~~~la~~~~d 295 (314)
....+.+++|+|+++.|+....+
T Consensus 423 ~~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 423 KAPGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp CSCSEEEEEECTTSSEEEEEEEE
T ss_pred cCCCceEEEECCCCCEEEEEecC
Confidence 55678899999999998876544
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=4.4e-24 Score=206.88 Aligned_cols=292 Identities=12% Similarity=0.075 Sum_probs=214.1
Q ss_pred ceeeecccccE-------EEEEECCCCCEEEEeeCC----C--cEEEeecCCCCCCc-----------------------
Q 021319 13 SREYTGHKKKV-------HSVAWNCTGTKLASGSVD----Q--TARVWHIEPHGHGK----------------------- 56 (314)
Q Consensus 13 ~~~~~gH~~~V-------~~v~~s~~g~~l~s~~~D----~--~v~iw~~~~~~~~~----------------------- 56 (314)
.+.+.+|...+ ..++|||||+.+++++.+ + .|.+|+++......
T Consensus 92 ~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~ 171 (1045)
T 1k32_A 92 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTF 171 (1045)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCS
T ss_pred eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCC
Confidence 45678898888 999999999977777755 3 46666654321000
Q ss_pred ----------------------eeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC-CceeeeEEecCceEE
Q 021319 57 ----------------------VKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS-GKCSQQAELSGENIN 113 (314)
Q Consensus 57 ----------------------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~-~~~~~~~~~~~~~~~ 113 (314)
.....+.+|...+.++.|+++ .++++++.|+++++|.+.. +..............
T Consensus 172 ~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~ 249 (1045)
T 1k32_A 172 ELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYP 249 (1045)
T ss_dssp CCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCE
T ss_pred CccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEecCCCCcce
Confidence 001234578888999999875 5777888899999997643 222222222233445
Q ss_pred EEEccCCCEEEEEeCCCcEEEEEccCCeEeeeecc------------CcceeeEEec-cCCCeEEEEcCCceEEEEeCCC
Q 021319 114 ITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF------------GYEVNEIAWN-MTGEMFFLTTGNGTVEVLTYPS 180 (314)
Q Consensus 114 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~ 180 (314)
.+|+|+|+.++.+ .++.+.+||+...+ +..... ...+..++|+ |+++.++++. ++.+.+|+...
T Consensus 250 ~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~ 326 (1045)
T 1k32_A 250 RHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSG 326 (1045)
T ss_dssp EEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTS
T ss_pred eeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCC
Confidence 6899999998887 48899999984332 222222 1257889999 9999888777 78899998876
Q ss_pred CCceeeeeeccc-ceEEEEECCCCCEEEEeeCCCeEE-EeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEE
Q 021319 181 LRPLDTVVAHTA-GCYCIAIDPMGRYFAVGSADSLVS-LWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFID 258 (314)
Q Consensus 181 ~~~~~~~~~~~~-~i~~i~~~~~~~~l~t~~~dg~i~-vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~ 258 (314)
.+.. .+..|.. .+..++|+ +|+.++.++.++.+. +||+..+... .+..+...+..++|+|+|++|++++.++.++
T Consensus 327 ~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~ 403 (1045)
T 1k32_A 327 TYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIM 403 (1045)
T ss_dssp SBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEE
T ss_pred CceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEE
Confidence 5433 3455666 78999999 999999988888888 9998876544 3446777899999999999999999999999
Q ss_pred EEECCCCCeEEEE-eccCccceeEEcCCCCeeEEEecCC--cccccccceEEecccc
Q 021319 259 ISNVHTGRTVHQI-PCRAAMNSVEWNPKYNLLAYAGDDK--NKYQADEGVFRIYGFE 312 (314)
Q Consensus 259 v~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~la~~~~d~--~~~~~~~~~~~~~~~~ 312 (314)
+||+.+++..... .+...+.+++|+|++++||+++.+. .......+++++|+++
T Consensus 404 ~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 404 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred EEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 9999999877666 4566789999999999999988754 1111234688888875
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=3.7e-24 Score=207.44 Aligned_cols=272 Identities=11% Similarity=0.086 Sum_probs=209.0
Q ss_pred eeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEE
Q 021319 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRL 93 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~i 93 (314)
+.+.+|...+.++.|+++ ..+++++.|+.++||.++..... . ..+..|. .+...+|+|++. .|+.+ .++.|.+
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~-~--~~l~~~~-~~~~~~~SpDG~-~la~~-~~~~i~~ 269 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKD-L--RKHTSFT-DYYPRHLNTDGR-RILFS-KGGSIYI 269 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCS-C--EECCCCC-SSCEEEEEESSS-CEEEE-ETTEEEE
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCc-c--eEecCCC-CcceeeEcCCCC-EEEEE-eCCEEEE
Confidence 345789999999999998 67778888999999988653321 1 2344454 356779999864 55555 4899999
Q ss_pred EeCCCCceeeeEEe------------cCceEEEEEc-cCCCEEEEEeCCCcEEEEEccCCeEeeeeccCc-ceeeEEecc
Q 021319 94 WDARSGKCSQQAEL------------SGENINITYK-PDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY-EVNEIAWNM 159 (314)
Q Consensus 94 wd~~~~~~~~~~~~------------~~~~~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~ 159 (314)
||....... .... ......++|+ |+|+.|+.+. ++.+.+|++...+......... .+..++|+
T Consensus 270 ~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 270 FNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp ECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-
T ss_pred ecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-
Confidence 998544332 2211 1135679999 9999999887 7889999988766544333334 67889999
Q ss_pred CCCeEEEEcCCceEE-EEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEE
Q 021319 160 TGEMFFLTTGNGTVE-VLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRT 238 (314)
Q Consensus 160 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 238 (314)
++..++.+..++.+. +|+....+.. .+..|...+..++|+|+|++|++++.++.|++||+.+++.......+...+..
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccc
Confidence 998888888888888 8887665433 33467788999999999999999999999999999998877777678888999
Q ss_pred EEEccCCcEEEEecCCc----------eEEEEECCCCCeEEEE-eccCccceeEEcCCCCeeEEEecCCc
Q 021319 239 ISFSHTGDYIASASEDL----------FIDISNVHTGRTVHQI-PCRAAMNSVEWNPKYNLLAYAGDDKN 297 (314)
Q Consensus 239 ~~~sp~~~~l~s~s~d~----------~v~v~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~la~~~~d~~ 297 (314)
++|||||++|++++.++ .|++||+.+++ +..+ .+...+.+++|+|+++.|++++.+..
T Consensus 426 ~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 426 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCC
T ss_pred eEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccC
Confidence 99999999999887654 89999999877 4443 34556888999999999998887543
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1e-24 Score=203.59 Aligned_cols=279 Identities=11% Similarity=0.088 Sum_probs=192.6
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCC---CEEEEEEcCCCCCEEEEEeCC---------
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD---SVDQLCWDPKHADLIATASGD--------- 88 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~D--------- 88 (314)
..+.+++|+|||+++++ +.||+|++||+++... ...+.+|.. .|..++|+|++ +.|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~----~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS----TVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC----EEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSSCCC
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcE----EEEeccccccccccceEEECCCC-CEEEEEecCccceeecce
Confidence 34788999999997766 7899999999976431 223455554 38999999985 677888764
Q ss_pred CcEEEEeCCCCceeeeEEecC---ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccC-c--------------
Q 021319 89 KTVRLWDARSGKCSQQAELSG---ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG-Y-------------- 150 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~-------------- 150 (314)
+.+.+||+.+++......... ....++|+|||+.|+.++. +.|.+||+...+.......+ .
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 788899999887632222111 1446889999999998876 78999999876554332221 1
Q ss_pred ----ceeeEEeccCCCeEEEEcCCc----------------------------------eEEEEeCCCCCceeeeeec--
Q 021319 151 ----EVNEIAWNMTGEMFFLTTGNG----------------------------------TVEVLTYPSLRPLDTVVAH-- 190 (314)
Q Consensus 151 ----~~~~~~~~~~~~~~~~~~~~g----------------------------------~~~~~~~~~~~~~~~~~~~-- 190 (314)
.+..++|+|+++.++++..++ .+.+|+....+....+..+
T Consensus 170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~ 249 (723)
T 1xfd_A 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD 249 (723)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC
T ss_pred EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc
Confidence 226799999999988876432 7888888766544444433
Q ss_pred ----ccceEEEEECCCCCEEEEeeC----CCeEEEeeCCCcEEEEEeeec-ccCe----EEEEEccCCcEEEE--ecCCc
Q 021319 191 ----TAGCYCIAIDPMGRYFAVGSA----DSLVSLWDISEMLCVRTFTKL-EWPV----RTISFSHTGDYIAS--ASEDL 255 (314)
Q Consensus 191 ----~~~i~~i~~~~~~~~l~t~~~----dg~i~vwd~~~~~~~~~~~~~-~~~v----~~~~~sp~~~~l~s--~s~d~ 255 (314)
...+..++|+|||+++++... +..|.+||+.++++...+..+ ...+ ..++|+|||+.|+. +..|+
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG 329 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccC
Confidence 556889999999999876643 357999999988776655433 2223 37899999998775 44666
Q ss_pred ------eEEEEEC-CCCCe--EEEEec-cCccce-eEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 256 ------FIDISNV-HTGRT--VHQIPC-RAAMNS-VEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 256 ------~v~v~~~-~~~~~--~~~~~~-~~~i~~-v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
.+.+||. .++.. ...+.. ...+.. ++|+|+++.|++.+.+. ..++++||.+
T Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~~~~~l~~~ 391 (723)
T 1xfd_A 330 GRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTED-----LPRRRQLYSA 391 (723)
T ss_dssp SSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSS-----CTTCCEEEEE
T ss_pred CCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCC-----CCcceEEEEE
Confidence 5667773 33331 344432 234444 69999999998777652 1245566655
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=2e-22 Score=171.89 Aligned_cols=264 Identities=11% Similarity=0.155 Sum_probs=179.9
Q ss_pred eCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeC--CCcEEEEeCCCCceeeeEE---ecCceEE
Q 021319 39 SVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG--DKTVRLWDARSGKCSQQAE---LSGENIN 113 (314)
Q Consensus 39 ~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~--D~~v~iwd~~~~~~~~~~~---~~~~~~~ 113 (314)
+.++.+.+|.++... +.........+...+..++|+|++. +++++.. ++.|.+||+.++....... .......
T Consensus 13 ~~~~~i~v~~~d~~t-g~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTA-KTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp SSCCEEEEEEEETTT-TEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCCCCEEEEEEcCCC-CeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 346789999887532 2333334445667778899999865 5544432 6899999997776433222 2345567
Q ss_pred EEEccCCCEEEEEe-CCCcEEEEEcc---CCeEeeeeccC----------cceeeEEeccCCCeEEEEcCCceEEEEeCC
Q 021319 114 ITYKPDGTHIAVGN-RDDELTILDVR---KFKPIHRRKFG----------YEVNEIAWNMTGEMFFLTTGNGTVEVLTYP 179 (314)
Q Consensus 114 ~~~~~~~~~l~~~~-~d~~i~i~d~~---~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 179 (314)
++|+|++++|++++ .++.+.+|++. ..+.+...... ..+..++|+|+++.+++...++.+.+|+..
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 99999999888887 67889999986 22333332221 236779999999966666778999999987
Q ss_pred CCCcee---eeee-cccceEEEEECCCCCEEEE-eeCCCeEEEeeCCC--cEE--EEEeeecc------cCeEEEEEccC
Q 021319 180 SLRPLD---TVVA-HTAGCYCIAIDPMGRYFAV-GSADSLVSLWDISE--MLC--VRTFTKLE------WPVRTISFSHT 244 (314)
Q Consensus 180 ~~~~~~---~~~~-~~~~i~~i~~~~~~~~l~t-~~~dg~i~vwd~~~--~~~--~~~~~~~~------~~v~~~~~sp~ 244 (314)
....+. .+.. ....+..++|+|+|+++++ +..++.|.+|++.. +.. +..+.... ..+..++|+|+
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 322222 1222 2236788999999996655 56678999999863 432 23333222 34788999999
Q ss_pred CcEE-EEecCCceEEEEECCC-C--CeEEEEec-cCccceeEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 245 GDYI-ASASEDLFIDISNVHT-G--RTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 245 ~~~l-~s~s~d~~v~v~~~~~-~--~~~~~~~~-~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
|++| ++...++.|.+|++.. + +.+..++. ...+..++|+|++++|++++.+. +.++||.+
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-------~~v~v~~~ 315 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNT-------DNATLYAR 315 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTT-------TEEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCC-------CcEEEEEE
Confidence 9987 5556789999999873 2 33444443 44689999999999998888653 56777744
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=1.7e-22 Score=170.99 Aligned_cols=245 Identities=12% Similarity=0.075 Sum_probs=177.3
Q ss_pred eecccccEEEEEECCCCCEEEEeeC-CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCC---cE
Q 021319 16 YTGHKKKVHSVAWNCTGTKLASGSV-DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK---TV 91 (314)
Q Consensus 16 ~~gH~~~V~~v~~s~~g~~l~s~~~-D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~---~v 91 (314)
+..+...+ .++|+|+|+++++++. ++.|.+||.++.. .....+..+..+..+++|+|++ ++++++..++ .|
T Consensus 36 ~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i 110 (331)
T 3u4y_A 36 ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP---PKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNM 110 (331)
T ss_dssp EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS---CEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEE
T ss_pred EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc---eeEEecccCCCCccceEECCCC-CEEEEecCCCCcccE
Confidence 33445566 9999999997666654 8999999987643 2133455566666669999985 5666555543 89
Q ss_pred EEEeCCCCceeeeEEecCceEEEEEccCCCEEEEE-eCCCc-EEEEEccCCeEe-----eeeccCcceeeEEeccCCCeE
Q 021319 92 RLWDARSGKCSQQAELSGENINITYKPDGTHIAVG-NRDDE-LTILDVRKFKPI-----HRRKFGYEVNEIAWNMTGEMF 164 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~-i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 164 (314)
.+||+.+++.............++|+|+|++++++ ..++. +.+|++.....+ .....+.....++|+|+++.+
T Consensus 111 ~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 111 QSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 99999999888777777777889999999866554 55688 999998653222 222334567889999999965
Q ss_pred EE-EcCCceEEEEeCCCCCc---eeeeeecccceEEEEECCCCCEEEEee-CCCeEEEeeCCCcEE--EEEeeec----c
Q 021319 165 FL-TTGNGTVEVLTYPSLRP---LDTVVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLC--VRTFTKL----E 233 (314)
Q Consensus 165 ~~-~~~~g~~~~~~~~~~~~---~~~~~~~~~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~--~~~~~~~----~ 233 (314)
++ ...++.+.+|+....+. +..+. ....+..++|+|+|+++++++ .++.|.+||+.+++. +..+... .
T Consensus 191 ~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 269 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDP 269 (331)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCC
T ss_pred EEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCC
Confidence 54 45689999999987776 55554 345678999999999766554 577899999998876 4443322 1
Q ss_pred c---CeEEEEEccCCcEEEEec-CCceEEEEECCCCC
Q 021319 234 W---PVRTISFSHTGDYIASAS-EDLFIDISNVHTGR 266 (314)
Q Consensus 234 ~---~v~~~~~sp~~~~l~s~s-~d~~v~v~~~~~~~ 266 (314)
. ....++|+|++++|+.++ .++.|.+||+.+..
T Consensus 270 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 270 RPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 1 235589999999886655 56799999997644
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=6.1e-23 Score=174.69 Aligned_cols=240 Identities=11% Similarity=0.039 Sum_probs=178.9
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCC-CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceee
Q 021319 25 SVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA-DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ 103 (314)
Q Consensus 25 ~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~ 103 (314)
.+++++++.++++++.++.|++||+.+.. . ...+..+. ..+..++|+|++..+++++..++.|.+||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~---~-~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDT---V-YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTE---E-EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCc---E-EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 35678889999999999999999987532 1 12233222 2567899999865456677789999999999888776
Q ss_pred eEEecCc-------eEEEEEccCCCEEEEEeCC------------CcEEEEEccCCe---EeeeeccCcceeeEEeccCC
Q 021319 104 QAELSGE-------NINITYKPDGTHIAVGNRD------------DELTILDVRKFK---PIHRRKFGYEVNEIAWNMTG 161 (314)
Q Consensus 104 ~~~~~~~-------~~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~ 161 (314)
....... ...++|+|+|++++++..+ +.+.+||+.+.+ .+........+.+++|+|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 6554321 4568899999999998865 899999998733 23333344467888899999
Q ss_pred CeEEEEcCCceEEEEeCCCCCceeeeeec---------------------------------------------------
Q 021319 162 EMFFLTTGNGTVEVLTYPSLRPLDTVVAH--------------------------------------------------- 190 (314)
Q Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 190 (314)
+ ++++. +.+.+|+..+.+....+..+
T Consensus 160 ~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 55543 34888887665544333211
Q ss_pred -----------------ccceEEEEECC-CCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEec
Q 021319 191 -----------------TAGCYCIAIDP-MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASAS 252 (314)
Q Consensus 191 -----------------~~~i~~i~~~~-~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s 252 (314)
...+..++++| ++++++++ ++.|.+||+.+++.++.+.. ...+..++|+|++++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEES
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEec
Confidence 11345678889 99999888 88999999999988777653 34577899999999999988
Q ss_pred CCceEEEEECCCCCeEEEEecc
Q 021319 253 EDLFIDISNVHTGRTVHQIPCR 274 (314)
Q Consensus 253 ~d~~v~v~~~~~~~~~~~~~~~ 274 (314)
.++.|.+||..+++.+..++..
T Consensus 314 ~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 314 TFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp BSSEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEeccccceeeeeecC
Confidence 8999999999999988887654
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.5e-23 Score=173.94 Aligned_cols=235 Identities=13% Similarity=0.097 Sum_probs=174.3
Q ss_pred eeeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCC-CCCCceeeEEeecC-CCCEEEEEEcCCCCCEEEEEe--CCC
Q 021319 14 REYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEP-HGHGKVKDIELRGH-ADSVDQLCWDPKHADLIATAS--GDK 89 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~-~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~--~D~ 89 (314)
+.+..|...|.+++|+|+|++|++++ ++.|++||++. ... . ....+| ...+.+++|+|++ ..|++++ .++
T Consensus 35 ~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~---~-~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~ 108 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP---E-KVDTGFATICNNDHGISPDG-ALYAISDKVEFG 108 (297)
T ss_dssp EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC---E-ECCCTTCCCBCSCCEECTTS-SEEEEEECTTTS
T ss_pred eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc---e-EeccccccccccceEECCCC-CEEEEEEeCCCC
Confidence 44667899999999999999999987 78999999875 321 1 123344 4678899999985 5777887 345
Q ss_pred cEEEEe--CCCCceeeeEEecCceEEEEEccCCCEEE-EEeCCCcEEEEEcc--CCeEeeeeccCcceeeEEeccCCCeE
Q 021319 90 TVRLWD--ARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDELTILDVR--KFKPIHRRKFGYEVNEIAWNMTGEMF 164 (314)
Q Consensus 90 ~v~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
..+||. ..++.. ...........++|+|+++.|+ ++..++.+.+|++. ..+..........+..+.|+|+++.+
T Consensus 109 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 109 KSAIYLLPSTGGTP-RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp SCEEEEEETTCCCC-EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred cceEEEEECCCCce-EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 566654 444442 2333334466789999999887 67788989999854 33333333445568899999999988
Q ss_pred EEEc-CCceEEEEeCC-CCCceeeeeecccceEEEEECCCCCEEEEeeCC-----------CeEEEeeCCCcEE--EEEe
Q 021319 165 FLTT-GNGTVEVLTYP-SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD-----------SLVSLWDISEMLC--VRTF 229 (314)
Q Consensus 165 ~~~~-~~g~~~~~~~~-~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~d-----------g~i~vwd~~~~~~--~~~~ 229 (314)
+++. .++.+.+|.+. .......+..|...+.+++|+|++++|++++.+ +.|.+||+.+++. +..+
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 267 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL 267 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc
Confidence 7765 58888888875 444556666777789999999999999888766 5699999987644 4445
Q ss_pred eecccCeEEEEEccCCcEEEEecCCc
Q 021319 230 TKLEWPVRTISFSHTGDYIASASEDL 255 (314)
Q Consensus 230 ~~~~~~v~~~~~sp~~~~l~s~s~d~ 255 (314)
..+...+..++|+|++++|++++.|.
T Consensus 268 ~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 268 FGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCCcccccceECCCCCEEEEEEecc
Confidence 56777899999999999999887663
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=4.7e-22 Score=169.55 Aligned_cols=238 Identities=11% Similarity=0.095 Sum_probs=187.2
Q ss_pred CCCEEEEEEcCCCCCEEEEEeC-------CCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEE-eCCCcEEEEEc
Q 021319 66 ADSVDQLCWDPKHADLIATASG-------DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG-NRDDELTILDV 137 (314)
Q Consensus 66 ~~~v~~l~~~~~~~~~l~s~~~-------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~ 137 (314)
...+..++++|++. .++.++. ++.|.+||..+++.............++++|+++.++++ ..++.+.+||+
T Consensus 40 ~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQEN-ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTT-EEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCC-EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 45678899999864 4555542 678999999999888877776667789999999966655 55789999999
Q ss_pred cCCeEeeeeccCc----------ceeeEEeccCCCeEEEEc--CCceEEEEeCCCCCceeeeeecccceEEEEECCCCCE
Q 021319 138 RKFKPIHRRKFGY----------EVNEIAWNMTGEMFFLTT--GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRY 205 (314)
Q Consensus 138 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 205 (314)
.+.+.+.....+. ....++++|+++.++++. .++.+.+|+....+....+..+...+.+++|+|++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 9888766655421 257899999999877765 4788999999887776666545666889999999999
Q ss_pred EEEeeCCCeEEEeeCCCcEEEEEeee----cccCeEEEEEccCCcEEEEecC-CceEEEEECCCCCeEEEEeccCcccee
Q 021319 206 FAVGSADSLVSLWDISEMLCVRTFTK----LEWPVRTISFSHTGDYIASASE-DLFIDISNVHTGRTVHQIPCRAAMNSV 280 (314)
Q Consensus 206 l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~s~s~-d~~v~v~~~~~~~~~~~~~~~~~i~~v 280 (314)
+++++.++.|.+||+.+++.+..+.. +...+..++|+|++++++.++. ++.|.+||..+++.+..+....+ ..+
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~ 277 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAV 277 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCE
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceE
Confidence 99999999999999999988877654 3445788999999998776665 59999999999998888775443 679
Q ss_pred EEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 281 EWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 281 ~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+|+|+++.++.++.. ++++.+|+.+
T Consensus 278 ~~s~dg~~l~v~~~~-------~~~v~~~d~~ 302 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQ-------AGKVSVIDAK 302 (353)
T ss_dssp EEETTTTEEEEEETT-------TTEEEEEETT
T ss_pred EECCCCCEEEEEECC-------CCeEEEEECC
Confidence 999999976655532 2567777764
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.2e-22 Score=171.95 Aligned_cols=244 Identities=10% Similarity=0.030 Sum_probs=183.0
Q ss_pred cEEEEEECCCCCEE-EEeeCCCcEEEeecCCCCCCceeeEEeec---CCCCEEEEEEcCCCCCEEEEEe-----------
Q 021319 22 KVHSVAWNCTGTKL-ASGSVDQTARVWHIEPHGHGKVKDIELRG---HADSVDQLCWDPKHADLIATAS----------- 86 (314)
Q Consensus 22 ~V~~v~~s~~g~~l-~s~~~D~~v~iw~~~~~~~~~~~~~~~~~---h~~~v~~l~~~~~~~~~l~s~~----------- 86 (314)
.+..++|+|+|+++ ++++.++.|.+||+.+.. ......... |...+..++|+|++ +.+++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--TLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--EEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--eEeeEEcCCcccccccccceEECCCC-CEEEEEeccccccccccc
Confidence 48899999999765 556678999999987532 222222221 12256788999975 4666665
Q ss_pred -CCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEE
Q 021319 87 -GDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFF 165 (314)
Q Consensus 87 -~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (314)
.++.|.+||..+++.............++|+|++++++++ ++.+.+||+.+.+.............+.|+|++..++
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVW 189 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCC
T ss_pred ccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEe
Confidence 5799999999988877766665566678899999988888 6889999999888776655433223446788887655
Q ss_pred EEcCCc------------------------eEEEEeCCCCCce-eeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeC
Q 021319 166 LTTGNG------------------------TVEVLTYPSLRPL-DTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (314)
Q Consensus 166 ~~~~~g------------------------~~~~~~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~ 220 (314)
+....+ .+.+|+....+.. ..+..+...+.+++|+|++++++++ ++.|.+||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~ 267 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDL 267 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEET
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEEC
Confidence 444322 4678887766543 2233455678899999999999888 789999999
Q ss_pred CCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec
Q 021319 221 SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 273 (314)
Q Consensus 221 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~ 273 (314)
.+++.+..+... ..+.+++|+|++++|++++.|+.|.+||+.+++.+..++.
T Consensus 268 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 268 EKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp TTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 999887776543 4578899999999999999999999999999998888764
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=1e-21 Score=168.40 Aligned_cols=262 Identities=13% Similarity=0.124 Sum_probs=176.2
Q ss_pred ccccEEEEEECCCCCEEEEeeCC----CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 19 HKKKVHSVAWNCTGTKLASGSVD----QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 19 H~~~V~~v~~s~~g~~l~s~~~D----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
|...+..++|+|||++|++++.+ +.|++|+++..............+......+++ ++..++++...+++|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56677889999999999999876 899999987532211122233345556777777 433344444468999999
Q ss_pred eCCCCceeee----EEec-----------CceEEEEEccCCCEEEEEe-CCCcEEEEEccCCeE--------------ee
Q 021319 95 DARSGKCSQQ----AELS-----------GENINITYKPDGTHIAVGN-RDDELTILDVRKFKP--------------IH 144 (314)
Q Consensus 95 d~~~~~~~~~----~~~~-----------~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~--------------~~ 144 (314)
++........ .... .....++|+|+|++++++. .++.+.+|++..... ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 9875432211 1111 1225689999999776655 478899998764331 11
Q ss_pred eeccCcceeeEEeccCCCeEEEEc-CCceEEEEeCCCCCc--eeee---eecccceEEEEECCCCCEEEEeeCC--CeEE
Q 021319 145 RRKFGYEVNEIAWNMTGEMFFLTT-GNGTVEVLTYPSLRP--LDTV---VAHTAGCYCIAIDPMGRYFAVGSAD--SLVS 216 (314)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~--~~~~---~~~~~~i~~i~~~~~~~~l~t~~~d--g~i~ 216 (314)
....+.....++|+|+++.++++. .++.+.+|++...+. +..+ ..+...+..++|+|+|++|++++.+ +.|.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 223345577899999999777666 689999999864432 2222 2233457899999999998776655 8999
Q ss_pred EeeCC--CcE--EEEEeeecccCeEEEEEccCCcEEEEec-CCceEEEE--ECCCCCeEEEEe--ccCccceeEEc
Q 021319 217 LWDIS--EML--CVRTFTKLEWPVRTISFSHTGDYIASAS-EDLFIDIS--NVHTGRTVHQIP--CRAAMNSVEWN 283 (314)
Q Consensus 217 vwd~~--~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s~s-~d~~v~v~--~~~~~~~~~~~~--~~~~i~~v~~~ 283 (314)
+|++. ++. .+..+.. ...+..++|+|+|++|++++ .++.+.+| |..+++...... ....+.||+|.
T Consensus 286 v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99995 333 4444444 45678899999999988887 56889996 455676543321 23467888885
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=7.3e-23 Score=190.67 Aligned_cols=262 Identities=16% Similarity=0.163 Sum_probs=186.6
Q ss_pred EEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCC-----------------CCEEEEEEcCCCCCEEEEE
Q 021319 23 VHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA-----------------DSVDQLCWDPKHADLIATA 85 (314)
Q Consensus 23 V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~-----------------~~v~~l~~~~~~~~~l~s~ 85 (314)
+..+.|+ |+.+++++.|+ | +||+.+.... .. .+..|. ..|.+++|+|+ +.++++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~-~~--~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~- 98 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSA-QT--TRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF- 98 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC--------C--EEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEe-eE--EeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-
Confidence 4557787 77788888888 8 9998764320 01 122222 56999999998 544444
Q ss_pred eCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccC-----CeEeeeeccCcc---------
Q 021319 86 SGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK-----FKPIHRRKFGYE--------- 151 (314)
Q Consensus 86 ~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~--------- 151 (314)
.|+.+++||+.+++.............++|+|||+.|+.+ .++.|.+||+.+ .+..........
T Consensus 99 -~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 99 -TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp -ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred -ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 4599999999988765544444455568999999999985 679999999987 655433222222
Q ss_pred ------eeeEEeccCCCeEEEEc---------------------------------CCceEEEEeCCCCCceeee--eec
Q 021319 152 ------VNEIAWNMTGEMFFLTT---------------------------------GNGTVEVLTYPSLRPLDTV--VAH 190 (314)
Q Consensus 152 ------~~~~~~~~~~~~~~~~~---------------------------------~~g~~~~~~~~~~~~~~~~--~~~ 190 (314)
+..+.|+|+++.++++. .+..+.+|+....+..... ..|
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 47899999999998886 4567888988766543322 245
Q ss_pred ccceEEEEECCCCCEEEEeeCCC-----eEEEeeCCCcEEEEEee-e-ccc---CeEEEEEcc--CCcEEEEecCCceEE
Q 021319 191 TAGCYCIAIDPMGRYFAVGSADS-----LVSLWDISEMLCVRTFT-K-LEW---PVRTISFSH--TGDYIASASEDLFID 258 (314)
Q Consensus 191 ~~~i~~i~~~~~~~~l~t~~~dg-----~i~vwd~~~~~~~~~~~-~-~~~---~v~~~~~sp--~~~~l~s~s~d~~v~ 258 (314)
...+.+++|+|||+.|++++.++ .|.+||+.++.....+. . ... .+..++|+| +|++|++++.|+.++
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccE
Confidence 66789999999999999887775 89999999883333322 2 111 246789999 999999999999999
Q ss_pred EEECC-CCCeEEEEec-cCccce-eEEcCCCCeeEEEecC
Q 021319 259 ISNVH-TGRTVHQIPC-RAAMNS-VEWNPKYNLLAYAGDD 295 (314)
Q Consensus 259 v~~~~-~~~~~~~~~~-~~~i~~-v~~~~~~~~la~~~~d 295 (314)
+|.+. +++.+..+.. ...+.+ ++|+|+++.|++++.+
T Consensus 337 l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 337 LYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp EEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred EEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 99876 6666666543 345666 7999999988777655
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=5.2e-22 Score=169.30 Aligned_cols=248 Identities=13% Similarity=0.185 Sum_probs=170.8
Q ss_pred ecccccEEEEEECCCCCEEEEeeC---CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEe-CCCcEE
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSV---DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS-GDKTVR 92 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~---D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~D~~v~ 92 (314)
..+...+..++|+|||+ |++++. ++.|++|+++... ......+..+...+..++|+|++ ++|++++ .+++|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~--~~~~~~~~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT--AHKLNTVVAPGTPPAYVAVDEAR-QLVYSANYHKGTAE 111 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE--EEEEEEEEEESCCCSEEEEETTT-TEEEEEETTTTEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc--EEEeeeeecCCCCCEEEEECCCC-CEEEEEeCCCCEEE
Confidence 34556788899999999 555543 6899999996422 11222334567788899999986 5566666 789999
Q ss_pred EEeCC-CCceeee--EEecC----------ceEEEEEccCCCEEEEEeCCCcEEEEEcc-CCeEe--ee--eccCcceee
Q 021319 93 LWDAR-SGKCSQQ--AELSG----------ENINITYKPDGTHIAVGNRDDELTILDVR-KFKPI--HR--RKFGYEVNE 154 (314)
Q Consensus 93 iwd~~-~~~~~~~--~~~~~----------~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~--~~--~~~~~~~~~ 154 (314)
+||+. ++..... ....+ ....++|+|+|+.+++...++.+.+||+. ..+.. .. ...+.....
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 99985 3333222 21111 24568999999966666678889999998 33222 11 122335678
Q ss_pred EEeccCCCeEEE-EcCCceEEEEeCCC--CC--ceeeeeecc------cceEEEEECCCCCEE-EEeeCCCeEEEeeCC-
Q 021319 155 IAWNMTGEMFFL-TTGNGTVEVLTYPS--LR--PLDTVVAHT------AGCYCIAIDPMGRYF-AVGSADSLVSLWDIS- 221 (314)
Q Consensus 155 ~~~~~~~~~~~~-~~~~g~~~~~~~~~--~~--~~~~~~~~~------~~i~~i~~~~~~~~l-~t~~~dg~i~vwd~~- 221 (314)
++|+|+++.+++ ...++.+.+|++.. .+ .+..+.... ..+..++|+|+|++| ++...++.|.+||+.
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 999999996555 56788999998764 22 112222222 347889999999987 455668999999997
Q ss_pred --CcEEEEEeeecccCeEEEEEccCCcEEEEecCC-ceEEEE--ECCCCCeE
Q 021319 222 --EMLCVRTFTKLEWPVRTISFSHTGDYIASASED-LFIDIS--NVHTGRTV 268 (314)
Q Consensus 222 --~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d-~~v~v~--~~~~~~~~ 268 (314)
....+..+..+...+..++|+|+|++|++++.+ +.+.+| |..+|+..
T Consensus 272 ~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 272 DGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 335556665555567899999999998888765 899999 55567655
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=9.4e-21 Score=162.40 Aligned_cols=268 Identities=12% Similarity=0.119 Sum_probs=178.5
Q ss_pred CCEEEEe----eCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC----CcEEEEeCCC--Cce
Q 021319 32 GTKLASG----SVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD----KTVRLWDARS--GKC 101 (314)
Q Consensus 32 g~~l~s~----~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D----~~v~iwd~~~--~~~ 101 (314)
..+++.| +.++.|.+|.++.... ........ +...+..++|+|++ ++|++++.+ +.|.+|++.. +..
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g-~~~~~~~~-~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETG-ESLPLSDA-EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTC-CEEEEEEE-ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCC-CEEEeecc-cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 3445555 3467899998865332 22222222 66777889999985 677777775 8999998765 443
Q ss_pred eeeEEe---cCceEEEEEccCCCEEEEEe-CCCcEEEEEccCCeEeeee----c-----------cCcceeeEEeccCCC
Q 021319 102 SQQAEL---SGENINITYKPDGTHIAVGN-RDDELTILDVRKFKPIHRR----K-----------FGYEVNEIAWNMTGE 162 (314)
Q Consensus 102 ~~~~~~---~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~ 162 (314)
...... ......+++ +++.|+++. .++.+.+|++.....+... . ....+..++|+|+++
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 332222 234455666 888777766 5788999998653322111 0 112246799999999
Q ss_pred eEEEE-cCCceEEEEeCCCCCc------e-------eeeeecccceEEEEECCCCCEEEEee-CCCeEEEeeCCCcEE--
Q 021319 163 MFFLT-TGNGTVEVLTYPSLRP------L-------DTVVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLC-- 225 (314)
Q Consensus 163 ~~~~~-~~~g~~~~~~~~~~~~------~-------~~~~~~~~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~-- 225 (314)
.++++ ..++.+.+|++..... + .....+...+..++|+|+|+++++++ .++.|.+||+.++..
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDE 247 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEE
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEE
Confidence 66554 4688999998764331 1 11123445688999999999887776 689999999986643
Q ss_pred EEEeee---cccCeEEEEEccCCcEEEEecC--CceEEEEECC--CCC--eEEEEeccCccceeEEcCCCCeeEEEecCC
Q 021319 226 VRTFTK---LEWPVRTISFSHTGDYIASASE--DLFIDISNVH--TGR--TVHQIPCRAAMNSVEWNPKYNLLAYAGDDK 296 (314)
Q Consensus 226 ~~~~~~---~~~~v~~~~~sp~~~~l~s~s~--d~~v~v~~~~--~~~--~~~~~~~~~~i~~v~~~~~~~~la~~~~d~ 296 (314)
+..+.. +......++|+|+|++|+++.. ++.|.+|++. +++ .+..+.....++.++|+|++++|++++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 248 IQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp EEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTT
T ss_pred eEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCC
Confidence 333322 2234679999999999876665 4889999985 455 344444445788999999999998888542
Q ss_pred cccccccceEEeccc
Q 021319 297 NKYQADEGVFRIYGF 311 (314)
Q Consensus 297 ~~~~~~~~~~~~~~~ 311 (314)
+.++||.+
T Consensus 328 -------~~v~v~~~ 335 (361)
T 3scy_A 328 -------NVIQIFER 335 (361)
T ss_dssp -------TEEEEEEE
T ss_pred -------CCEEEEEE
Confidence 46666544
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=6.7e-23 Score=191.38 Aligned_cols=277 Identities=10% Similarity=0.055 Sum_probs=188.5
Q ss_pred eeeecccc---cEEEEEECCCCCEEEEeeCC---------CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCE
Q 021319 14 REYTGHKK---KVHSVAWNCTGTKLASGSVD---------QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADL 81 (314)
Q Consensus 14 ~~~~gH~~---~V~~v~~s~~g~~l~s~~~D---------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 81 (314)
+.+.+|.. .|.+++|||||++|++++.+ +.+.+||++.... .......+|...+..++|+|++ +.
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG-~~ 127 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKLQYAGWGPKG-QQ 127 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCCSBCCBCSST-TC
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCccccccccccEECCCC-CE
Confidence 34455554 49999999999999999875 6788999976432 1111123455558889999986 56
Q ss_pred EEEEeCCCcEEEEeCCCCceeeeEEec-C------------------ceEEEEEccCCCEEEEEeCCC------------
Q 021319 82 IATASGDKTVRLWDARSGKCSQQAELS-G------------------ENINITYKPDGTHIAVGNRDD------------ 130 (314)
Q Consensus 82 l~s~~~D~~v~iwd~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~l~~~~~d~------------ 130 (314)
|+.++. +.|++||..+++........ . ....++|+|||+.|+.++.++
T Consensus 128 la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~ 206 (723)
T 1xfd_A 128 LIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT 206 (723)
T ss_dssp EEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS
T ss_pred EEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccC
Confidence 777765 79999999888765443321 1 125799999999999887543
Q ss_pred ----------------------cEEEEEccCCeEeeeecc-------CcceeeEEeccCCCeEEEEcC----CceEEEEe
Q 021319 131 ----------------------ELTILDVRKFKPIHRRKF-------GYEVNEIAWNMTGEMFFLTTG----NGTVEVLT 177 (314)
Q Consensus 131 ----------------------~i~i~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~ 177 (314)
.+.+||+.+.+....... ...+..++|+|+++.+++... +..+.+|+
T Consensus 207 ~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 207 GSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 688999887654333322 345778999999998766542 35788888
Q ss_pred CCCCCceeeeee-cccce----EEEEECCCCCEEEE--eeCCC------eEEEee-CCCcE--EEEEeeecccCeEE-EE
Q 021319 178 YPSLRPLDTVVA-HTAGC----YCIAIDPMGRYFAV--GSADS------LVSLWD-ISEML--CVRTFTKLEWPVRT-IS 240 (314)
Q Consensus 178 ~~~~~~~~~~~~-~~~~i----~~i~~~~~~~~l~t--~~~dg------~i~vwd-~~~~~--~~~~~~~~~~~v~~-~~ 240 (314)
..+.+....+.. +...+ ..++|+|||+.|+. +..++ .|.+|| ...+. +...+......+.. ++
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~ 366 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILA 366 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEE
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeE
Confidence 877665544433 23333 37899999997664 45667 566777 33333 14445444555655 69
Q ss_pred EccCCcEEEEecCC---ceEEEEECCCCC--eEEEEe----ccCccceeEEcCCCCeeEEEec
Q 021319 241 FSHTGDYIASASED---LFIDISNVHTGR--TVHQIP----CRAAMNSVEWNPKYNLLAYAGD 294 (314)
Q Consensus 241 ~sp~~~~l~s~s~d---~~v~v~~~~~~~--~~~~~~----~~~~i~~v~~~~~~~~la~~~~ 294 (314)
|+|+|++|+..+.+ +.+++|++.... ....+. +...+..++|+|+++.|+....
T Consensus 367 ~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 367 YDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp EETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred EcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 99999999766554 789999986432 233333 2456889999999998876543
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=1.3e-21 Score=166.34 Aligned_cols=225 Identities=11% Similarity=0.071 Sum_probs=173.1
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecC--ceEEEEEccCCCEEEE-EeCCCcEEEEEccCCeEeeeeccC
Q 021319 73 CWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG--ENINITYKPDGTHIAV-GNRDDELTILDVRKFKPIHRRKFG 149 (314)
Q Consensus 73 ~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~ 149 (314)
++.+. +.++++++.+++|++||..+++......... ....++++|+++.+++ ...++.|.+||+.+.+.+......
T Consensus 6 ~~~~~-~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 6 ALKAG-HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCTT-CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred cccCC-CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 34544 5688999999999999999998877776655 5678999999987654 456889999999988877665542
Q ss_pred -------cceeeEEeccCCCeEEEEcCC------------ceEEEEeCCCCCc---eeeeeecccceEEEEECCCCCEEE
Q 021319 150 -------YEVNEIAWNMTGEMFFLTTGN------------GTVEVLTYPSLRP---LDTVVAHTAGCYCIAIDPMGRYFA 207 (314)
Q Consensus 150 -------~~~~~~~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~---~~~~~~~~~~i~~i~~~~~~~~l~ 207 (314)
..+..++|+|+++.++++..+ +.+.+|+....+. +... .+...+.+++|+|+|+ ++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCc-EE
Confidence 236789999999999888754 8999999876332 2222 2344688999999999 55
Q ss_pred EeeCCCeEEEeeCCCcEEEEEeeecc------------------------------------------------------
Q 021319 208 VGSADSLVSLWDISEMLCVRTFTKLE------------------------------------------------------ 233 (314)
Q Consensus 208 t~~~dg~i~vwd~~~~~~~~~~~~~~------------------------------------------------------ 233 (314)
+++. .|.+||+.+++.+..+....
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 5543 39999998887766554221
Q ss_pred --------------cCeEEEEEcc-CCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCcc
Q 021319 234 --------------WPVRTISFSH-TGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNK 298 (314)
Q Consensus 234 --------------~~v~~~~~sp-~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~ 298 (314)
..+..++|+| ++++++++ ++.|.+||..+++.+..+.....+.+++|+|+++.|++++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--- 315 (349)
T 1jmx_B 241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTF--- 315 (349)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBS---
T ss_pred cCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCC---
Confidence 1345677889 99999988 889999999999988888776778999999999988886654
Q ss_pred cccccceEEecccc
Q 021319 299 YQADEGVFRIYGFE 312 (314)
Q Consensus 299 ~~~~~~~~~~~~~~ 312 (314)
+.+++|+.+
T Consensus 316 -----~~v~v~d~~ 324 (349)
T 1jmx_B 316 -----NDLAVFNPD 324 (349)
T ss_dssp -----SEEEEEETT
T ss_pred -----CeEEEEecc
Confidence 567788764
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=1.3e-21 Score=169.14 Aligned_cols=277 Identities=11% Similarity=0.066 Sum_probs=184.8
Q ss_pred ceeeecccccEEE-----EEECCCCCEEEEeeC-CCc--EEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEE
Q 021319 13 SREYTGHKKKVHS-----VAWNCTGTKLASGSV-DQT--ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIAT 84 (314)
Q Consensus 13 ~~~~~gH~~~V~~-----v~~s~~g~~l~s~~~-D~~--v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 84 (314)
.+.++.|...... .+|||||++|+.++. ++. |.+||++.. . ......++...+..+.|+|++ ..|+.
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g---~-~~~lt~~~~~~~~~~~~spdg-~~l~~ 97 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ---V-ATQLTEGRGDNTFGGFLSPDD-DALFY 97 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTC---E-EEECCCSSCBCSSSCEECTTS-SEEEE
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCC---c-eEEeeeCCCCCccceEEcCCC-CEEEE
Confidence 3456667766666 889999999999887 775 666666542 2 222234555555567899985 67888
Q ss_pred EeCCCcEEEEeCCCCceeeeEEecCceE---EEEEccCCCEEEEEe----------------------CCCcEEEEEccC
Q 021319 85 ASGDKTVRLWDARSGKCSQQAELSGENI---NITYKPDGTHIAVGN----------------------RDDELTILDVRK 139 (314)
Q Consensus 85 ~~~D~~v~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~----------------------~d~~i~i~d~~~ 139 (314)
++.++.|.+||+.+++............ ...++|+++.++... .+..|.+||+.+
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred EeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 8899999999999988665555444332 234589999887432 335789999988
Q ss_pred CeEeeeeccCcceeeEEecc-CCCeEEEEcCC------ceEEEEeCCCCCceeeeeecc--cceEEEEECCCCCEEEEee
Q 021319 140 FKPIHRRKFGYEVNEIAWNM-TGEMFFLTTGN------GTVEVLTYPSLRPLDTVVAHT--AGCYCIAIDPMGRYFAVGS 210 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~--~~i~~i~~~~~~~~l~t~~ 210 (314)
.+..........+..+.|+| ++..++..... ..+.+++....+. ..+..+. ..+...+|+|||+.|+..+
T Consensus 178 g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 178 GESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp CCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred CceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEe
Confidence 76544444455678899999 99888776543 3677777654433 2333333 3477889999999775433
Q ss_pred C-CC----eEEEeeCCCcEEE--EEeeecc---cCeEEEEEccCCcEEEEe---------cCCceEEEEECCCCCeEEEE
Q 021319 211 A-DS----LVSLWDISEMLCV--RTFTKLE---WPVRTISFSHTGDYIASA---------SEDLFIDISNVHTGRTVHQI 271 (314)
Q Consensus 211 ~-dg----~i~vwd~~~~~~~--~~~~~~~---~~v~~~~~sp~~~~l~s~---------s~d~~v~v~~~~~~~~~~~~ 271 (314)
. ++ .|.+||+.+++.. ..+..+. .....++|+|||+.|+.. ..+..|.+||..+++.....
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEE
T ss_pred cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEec
Confidence 3 22 3999999887643 2222210 011224799999988854 45668999999887654333
Q ss_pred eccC-----------ccceeEEcCCCCeeEEEecC
Q 021319 272 PCRA-----------AMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 272 ~~~~-----------~i~~v~~~~~~~~la~~~~d 295 (314)
.+.. .+.+++|+|+++.|++++..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~ 371 (388)
T 3pe7_A 337 RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV 371 (388)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred cccCcccccccccccCCCCccCCCCCCEEEEEecC
Confidence 3333 47899999999999888754
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=2.5e-22 Score=187.44 Aligned_cols=262 Identities=14% Similarity=0.114 Sum_probs=178.7
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCC---CEEEEEEcCCCCCEEEEEeC---------CCcEE
Q 021319 25 SVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD---SVDQLCWDPKHADLIATASG---------DKTVR 92 (314)
Q Consensus 25 ~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~~---------D~~v~ 92 (314)
+++|+|||+++++ +.|+.|++||++... ....+.+|.. .+..++|+|++ +.|++++. |+.|+
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQ----SYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCC----EEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCc----EEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecceEEE
Confidence 7899999965554 469999999987632 1222333433 48899999985 57777765 78999
Q ss_pred EEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCc-------------------cee
Q 021319 93 LWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY-------------------EVN 153 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------~~~ 153 (314)
+||+.+++......+......++|+|||+.|+.+. ++.|.+||+.+.+.......+. ...
T Consensus 94 ~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 94 IYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp EEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred EEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 99999887632122334566799999999999885 7899999997765433221111 114
Q ss_pred eEEeccCCCeEEEEcCCc----------------------------------eEEEEeCCCCCce--------eeeeecc
Q 021319 154 EIAWNMTGEMFFLTTGNG----------------------------------TVEVLTYPSLRPL--------DTVVAHT 191 (314)
Q Consensus 154 ~~~~~~~~~~~~~~~~~g----------------------------------~~~~~~~~~~~~~--------~~~~~~~ 191 (314)
.+.|+|+|+.++++..+. .+.+|+....+.. ..+..|.
T Consensus 173 ~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 173 ALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp CEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred cEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence 799999999998876431 6778887665432 1123467
Q ss_pred cceEEEEECCCCCEEEEeeCC----CeEEEee----CCCcEEEEEe----eecccCeE-----EEEEccCCcEEEE--ec
Q 021319 192 AGCYCIAIDPMGRYFAVGSAD----SLVSLWD----ISEMLCVRTF----TKLEWPVR-----TISFSHTGDYIAS--AS 252 (314)
Q Consensus 192 ~~i~~i~~~~~~~~l~t~~~d----g~i~vwd----~~~~~~~~~~----~~~~~~v~-----~~~~sp~~~~l~s--~s 252 (314)
..+..++|+||++++++.... ..|.+|| ..++++...+ ..+...+. .++|+|||+.|+. ..
T Consensus 253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc
Confidence 778999999998877774432 2488899 7777655444 34554555 7899999996554 44
Q ss_pred CCc--eEEEEECCCCCeEEEEec-cCccceeEEcCCCCeeEEEecC
Q 021319 253 EDL--FIDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 253 ~d~--~v~v~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~la~~~~d 295 (314)
.++ .|.+|+..+++ ...+.. ...+..+.++ ++..|++.+.+
T Consensus 333 ~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 333 KDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp TTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred cCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 555 56677776666 334432 3457777777 77777777654
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=5.7e-20 Score=157.95 Aligned_cols=268 Identities=13% Similarity=0.145 Sum_probs=177.8
Q ss_pred EEEeeC--CCcEEEeecCCCCCCceeeEEe-e-cCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCC-CCceeeeEEec-
Q 021319 35 LASGSV--DQTARVWHIEPHGHGKVKDIEL-R-GHADSVDQLCWDPKHADLIATASGDKTVRLWDAR-SGKCSQQAELS- 108 (314)
Q Consensus 35 l~s~~~--D~~v~iw~~~~~~~~~~~~~~~-~-~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~-~~~~~~~~~~~- 108 (314)
++.|++ ++.|.+|+++... +....... . +....+..++|+|++ ++|++++.+ .|.+||+. +++........
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~-g~l~~~~~~~~~~~~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEK-LTCKLIKRTEIPQDEPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTT-TEEEEEEEEECCTTCCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCC-CCEEEeeEEccCCCCCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEEeeEeec
Confidence 444544 2568887765422 22221111 1 233467789999985 577788877 99999987 77654433221
Q ss_pred -CceEEEEEccCCCE--EEEEe-------------CCCcEEEEEccC-CeEeeeec-----cCcceeeEEeccCCCeEEE
Q 021319 109 -GENINITYKPDGTH--IAVGN-------------RDDELTILDVRK-FKPIHRRK-----FGYEVNEIAWNMTGEMFFL 166 (314)
Q Consensus 109 -~~~~~~~~~~~~~~--l~~~~-------------~d~~i~i~d~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 166 (314)
+....++++|+|+. ++++. .++.+.+|++.. .+...... ....+..++|+|+++.+++
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 33345788999995 44442 688999999863 43322222 3456888999999998776
Q ss_pred Ec-CCceEEEEeCC-CCCc--eeeee--ecccceEEEEECCCCCEEEEeeC-CCeEEEeeCC--CcEEE---EEeeec--
Q 021319 167 TT-GNGTVEVLTYP-SLRP--LDTVV--AHTAGCYCIAIDPMGRYFAVGSA-DSLVSLWDIS--EMLCV---RTFTKL-- 232 (314)
Q Consensus 167 ~~-~~g~~~~~~~~-~~~~--~~~~~--~~~~~i~~i~~~~~~~~l~t~~~-dg~i~vwd~~--~~~~~---~~~~~~-- 232 (314)
+. .++.+.+|+.. ..+. +..+. .|...+..++|+|+|+++++++. ++.|.+|++. +++.. +.+...
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 64 56899999987 4432 22222 23567899999999999887765 6899999865 44432 222211
Q ss_pred -----cc------CeEEEE-EccCCcEEEEecCCc------eEEEEECC-CCCeEEE---Ee-ccCccceeEEcC---CC
Q 021319 233 -----EW------PVRTIS-FSHTGDYIASASEDL------FIDISNVH-TGRTVHQ---IP-CRAAMNSVEWNP---KY 286 (314)
Q Consensus 233 -----~~------~v~~~~-~sp~~~~l~s~s~d~------~v~v~~~~-~~~~~~~---~~-~~~~i~~v~~~~---~~ 286 (314)
.. .+..++ |+|||++|++++.+. .|.+|++. +++.... .. .......++|+| ++
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC
Confidence 11 478899 999999988776432 89999986 5664431 32 234678999999 89
Q ss_pred CeeEEEecCCcccccccceEEecccc
Q 021319 287 NLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 287 ~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
++|++++.+ +++++||.++
T Consensus 322 ~~l~v~~~~-------~~~v~v~~~~ 340 (365)
T 1jof_A 322 EWMAITDDQ-------EGWLEIYRWK 340 (365)
T ss_dssp TEEEEECSS-------SCEEEEEEEE
T ss_pred CEEEEEEcC-------CCeEEEEEEc
Confidence 999988865 2678888764
No 159
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=4.9e-21 Score=168.15 Aligned_cols=202 Identities=13% Similarity=0.123 Sum_probs=144.0
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCC-------C-Ccee---eEEeecCCCCEEEEEEcCCCCCEEE----E
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHG-------H-GKVK---DIELRGHADSVDQLCWDPKHADLIA----T 84 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~-------~-~~~~---~~~~~~h~~~v~~l~~~~~~~~~l~----s 84 (314)
...++.+++++++.++++++.|+ ++||+..... . .... ......|...|.+++|+|++ ++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN-LTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS-CEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC-CEEEEEEec
Confidence 44689999999999999999888 8998753110 0 0100 00112466789999999985 5777 8
Q ss_pred EeCCCcEEEEeCCCC--------ceeeeEE----ecCceEEEEEccC-CCEEEEEeCCCcEEEEEccCCeEeeeeccCcc
Q 021319 85 ASGDKTVRLWDARSG--------KCSQQAE----LSGENINITYKPD-GTHIAVGNRDDELTILDVRKFKPIHRRKFGYE 151 (314)
Q Consensus 85 ~~~D~~v~iwd~~~~--------~~~~~~~----~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 151 (314)
++.|++|++||+.++ +...... +...+..++|+|+ +.+|++++.|+.+++||+++...
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~--------- 184 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK--------- 184 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE---------
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc---------
Confidence 899999999998654 1111111 2345667888887 77888888888888888765421
Q ss_pred eeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee
Q 021319 152 VNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (314)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~ 231 (314)
.....+|...+++++|+|+|++|++|+.||.|++||++ +.....+..
T Consensus 185 --------------------------------~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~ 231 (434)
T 2oit_A 185 --------------------------------VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPC 231 (434)
T ss_dssp --------------------------------EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECC
T ss_pred --------------------------------eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccC
Confidence 11223477789999999999999999999999999998 444444443
Q ss_pred c-------ccCeEEEEEccCCcEEEEe-cCCc------eEEEEECCCC
Q 021319 232 L-------EWPVRTISFSHTGDYIASA-SEDL------FIDISNVHTG 265 (314)
Q Consensus 232 ~-------~~~v~~~~~sp~~~~l~s~-s~d~------~v~v~~~~~~ 265 (314)
+ ...+.+++|++++.++++. +.|| .+++|++.+.
T Consensus 232 ~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 232 PPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 3 2378999999999888653 3443 3899998764
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=4.2e-21 Score=168.58 Aligned_cols=215 Identities=13% Similarity=0.139 Sum_probs=157.7
Q ss_pred CcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCe----------------EeeeeccCcce
Q 021319 89 KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFK----------------PIHRRKFGYEV 152 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----------------~~~~~~~~~~~ 152 (314)
+.+++|+.... . .......+++++++.++++++.++ +.+|+..... +.........+
T Consensus 23 ~~vri~~~~~~-----~-~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 95 (434)
T 2oit_A 23 KKVRIFDSPEE-----L-PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPI 95 (434)
T ss_dssp CEEECSCCCSS-----C-CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCE
T ss_pred eeEEecCCccc-----c-CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcc
Confidence 46788764311 0 122344577889999999998887 8887753210 11122334568
Q ss_pred eeEEeccCCCeEE----EEcCCceEEEEeCCCC--------Cc---eeeeeecccceEEEEECCC-CCEEEEeeCCCeEE
Q 021319 153 NEIAWNMTGEMFF----LTTGNGTVEVLTYPSL--------RP---LDTVVAHTAGCYCIAIDPM-GRYFAVGSADSLVS 216 (314)
Q Consensus 153 ~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~--------~~---~~~~~~~~~~i~~i~~~~~-~~~l~t~~~dg~i~ 216 (314)
.+++|+++++.++ +++.++.+++|+.... ++ +..+.+|...|++++|+|+ +.+|++++.||+|+
T Consensus 96 ~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~ 175 (434)
T 2oit_A 96 HHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIA 175 (434)
T ss_dssp EEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEE
Confidence 9999999999999 5677999999987543 22 3345568999999999998 88999999999999
Q ss_pred EeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec--------cCccceeEEcCCCCe
Q 021319 217 LWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC--------RAAMNSVEWNPKYNL 288 (314)
Q Consensus 217 vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~--------~~~i~~v~~~~~~~~ 288 (314)
+||++++..+.....|...|.+++|+|+|++|++|+.|+.|++||.. ++....+.. ...|.+++|++++.+
T Consensus 176 iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 176 VLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 99999887776666788899999999999999999999999999998 555555432 127899999998887
Q ss_pred eEEEe-cCCcccccccceEEeccccC
Q 021319 289 LAYAG-DDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 289 la~~~-~d~~~~~~~~~~~~~~~~~~ 313 (314)
+++.+ .|+. . -....+++|++.+
T Consensus 255 l~~~~~~dg~-~-~~~~~v~i~~l~~ 278 (434)
T 2oit_A 255 AIVYAAADGT-L-ETSPDVVMALLPK 278 (434)
T ss_dssp EEEEEETTCC-S-SSCCEEEEEECCC
T ss_pred EEEEccCCCc-c-CCCCceEEEEecc
Confidence 75443 3321 1 0113478888753
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=6.7e-21 Score=173.65 Aligned_cols=231 Identities=13% Similarity=0.024 Sum_probs=165.0
Q ss_pred CCCEEEEEEcCCCCCEEEEEeC-CCcEEEEeCCCCceeeeEEec-CceEEEEEccCCCEEEEEeC---CCcEEEEEccC-
Q 021319 66 ADSVDQLCWDPKHADLIATASG-DKTVRLWDARSGKCSQQAELS-GENINITYKPDGTHIAVGNR---DDELTILDVRK- 139 (314)
Q Consensus 66 ~~~v~~l~~~~~~~~~l~s~~~-D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~- 139 (314)
..+|..++++|++ +.|++++. |++++||++..+...+..... .....+.|+|| +.++++.. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCC-CeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 5579999999985 57777776 999999998766654443333 24457889999 77777765 45556665433
Q ss_pred -CeEeeeeccCcceeeEEeccCCCe-EEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCC----C
Q 021319 140 -FKPIHRRKFGYEVNEIAWNMTGEM-FFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD----S 213 (314)
Q Consensus 140 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~d----g 213 (314)
................+|+|+++. +++....+...+|++.+.+... +..+.. .+++|+|||+++|.++.+ +
T Consensus 99 ~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 99 RPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp STTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-EEEESS--CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-eecCCC--ceEEECCCCCEEEEEEEcCCCCe
Confidence 211112222333446688898864 4444555666699886655433 333333 789999999999988777 7
Q ss_pred eEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCc--eEEEEECCCCCeEEEEe-ccCccceeE--------E
Q 021319 214 LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDL--FIDISNVHTGRTVHQIP-CRAAMNSVE--------W 282 (314)
Q Consensus 214 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~--~v~v~~~~~~~~~~~~~-~~~~i~~v~--------~ 282 (314)
.|.+||+.+++.. .+..+...+..++|||||++|++++.++ .|++||+.+++.. .+. +...+.+++ |
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGY 253 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEE
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeE
Confidence 8999999877644 5667777889999999999999888888 8999999988876 433 344677788 9
Q ss_pred cCCCCeeEEEecCCcccccccceEEeccc
Q 021319 283 NPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 283 ~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
+|++.++++++.| |+++||.+
T Consensus 254 spdg~~~~~~~~~--------g~~~l~~~ 274 (582)
T 3o4h_A 254 LPDGRLAVVARRE--------GRSAVFID 274 (582)
T ss_dssp CTTSCEEEEEEET--------TEEEEEET
T ss_pred cCCCcEEEEEEcC--------CcEEEEEE
Confidence 9999888888866 56777754
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=7.8e-20 Score=158.21 Aligned_cols=264 Identities=9% Similarity=0.018 Sum_probs=172.7
Q ss_pred cEEEEEECCCCCEEEEeeCC---CcEEEeecCCCCCCceeeEEeecCCCC-EEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q 021319 22 KVHSVAWNCTGTKLASGSVD---QTARVWHIEPHGHGKVKDIELRGHADS-VDQLCWDPKHADLIATASGDKTVRLWDAR 97 (314)
Q Consensus 22 ~V~~v~~s~~g~~l~s~~~D---~~v~iw~~~~~~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~l~s~~~D~~v~iwd~~ 97 (314)
.+.+++|||||++|+....+ ..|.+|+++.. .. ..+..+... ...+.|+|++ +.|+.++.++.|.+||+.
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~---~~--~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ---QA--VQLTEGKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT---EE--EECCCSSCBCTTTCEECTTS-SEEEEEETTTEEEEEETT
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCC---cE--EEeecCCCCccccceECCCC-CEEEEEEcCCcEEEEECC
Confidence 37788999999998876543 36777776542 22 123333333 3337899985 688888888899999998
Q ss_pred CCceeeeEEecCceE----E----------------EEEccCCCEEEEE-----eCCCcEEEEEccCCeEeeeeccCcce
Q 021319 98 SGKCSQQAELSGENI----N----------------ITYKPDGTHIAVG-----NRDDELTILDVRKFKPIHRRKFGYEV 152 (314)
Q Consensus 98 ~~~~~~~~~~~~~~~----~----------------~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~ 152 (314)
+++............ . ..++|+++.++.. ..+..|.+||+.+.+..........+
T Consensus 111 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~ 190 (396)
T 3c5m_A 111 TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWL 190 (396)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCE
T ss_pred CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccc
Confidence 887654443222211 1 2346666665543 34567899999876654444445567
Q ss_pred eeEEecc-CCCeEEEEcCC------ceEEEEeCCCCCceeeeeec--ccceEEEEECCCCCEEEEeeCC-----CeEEEe
Q 021319 153 NEIAWNM-TGEMFFLTTGN------GTVEVLTYPSLRPLDTVVAH--TAGCYCIAIDPMGRYFAVGSAD-----SLVSLW 218 (314)
Q Consensus 153 ~~~~~~~-~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~--~~~i~~i~~~~~~~~l~t~~~d-----g~i~vw 218 (314)
..+.|+| ++..++....+ ..+.+++....+.. .+..+ ...+..++|+|+|++|+..+.+ +.|.+|
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA 269 (396)
T ss_dssp EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence 8889999 77766655433 35777777554322 22222 2357889999999987766544 459999
Q ss_pred eCCCcEEEEEeeecccCeEEEEEcc-CCcEEEEec----------------CCceEEEEECCCCCeEEEEeccC------
Q 021319 219 DISEMLCVRTFTKLEWPVRTISFSH-TGDYIASAS----------------EDLFIDISNVHTGRTVHQIPCRA------ 275 (314)
Q Consensus 219 d~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~s----------------~d~~v~v~~~~~~~~~~~~~~~~------ 275 (314)
|+.+++..... ... ... +.|+| +|+++++++ .+..|.+||..+++......+..
T Consensus 270 d~~~g~~~~l~-~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 346 (396)
T 3c5m_A 270 NPETLENEEVM-VMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLD 346 (396)
T ss_dssp CTTTCCEEEEE-ECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBT
T ss_pred ECCCCCeEEee-eCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcccccc
Confidence 99877543322 122 123 88999 999988765 34789999998876533222222
Q ss_pred -----ccceeEEcCCCCeeEEEecC
Q 021319 276 -----AMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 276 -----~i~~v~~~~~~~~la~~~~d 295 (314)
.+..++|+|+++.|++++.+
T Consensus 347 ~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 347 GDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp TBSSTTCCCCEECTTSSEEEEEECT
T ss_pred ccccCCCCCceEccCCCeEEEEecC
Confidence 26778999999999888865
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=4.9e-19 Score=152.11 Aligned_cols=241 Identities=7% Similarity=0.050 Sum_probs=165.0
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceee-EEeecCCCCEEEEEEcCCCCC-EEEEEe------------
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKD-IELRGHADSVDQLCWDPKHAD-LIATAS------------ 86 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~-~~~~~h~~~v~~l~~~~~~~~-~l~s~~------------ 86 (314)
..+..++|+|||++|++++.+ .|.+|+++.. +.... .....+ +.+..++|+|++.. +++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~--g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSP--TEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEET--TEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCC--CCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 467899999999999999888 9999998621 12211 111111 23455788998643 344553
Q ss_pred -CCCcEEEEeCC-CCceeeeEE-----ecCceEEEEEccCCCEEEEEeC-CCcEEEEEcc-CCeEe--eeec---cCcce
Q 021319 87 -GDKTVRLWDAR-SGKCSQQAE-----LSGENINITYKPDGTHIAVGNR-DDELTILDVR-KFKPI--HRRK---FGYEV 152 (314)
Q Consensus 87 -~D~~v~iwd~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~-~~~~~--~~~~---~~~~~ 152 (314)
.++++++|++. +++...... .......++|+|+|++++++.. ++.|.+||+. +.+.. .... .+..+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 68999999987 465543332 1245667999999998887664 6789999997 55432 2222 14557
Q ss_pred eeEEeccCCCeEEEEcC-CceEEEEeCCC--CCce---eeee-------eccc------ceEEEE-ECCCCCEEEEeeCC
Q 021319 153 NEIAWNMTGEMFFLTTG-NGTVEVLTYPS--LRPL---DTVV-------AHTA------GCYCIA-IDPMGRYFAVGSAD 212 (314)
Q Consensus 153 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~--~~~~---~~~~-------~~~~------~i~~i~-~~~~~~~l~t~~~d 212 (314)
..++|+|+++.++++.. ++.+.+|++.. .+.. ..+. +|.. .+..++ |+|||++|++++.+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 88999999998877664 68999987642 3221 1111 1121 478999 99999998877653
Q ss_pred C------eEEEeeCC-CcEEEE---EeeecccCeEEEEEcc---CCcEEEEecCC-ceEEEEECCCC
Q 021319 213 S------LVSLWDIS-EMLCVR---TFTKLEWPVRTISFSH---TGDYIASASED-LFIDISNVHTG 265 (314)
Q Consensus 213 g------~i~vwd~~-~~~~~~---~~~~~~~~v~~~~~sp---~~~~l~s~s~d-~~v~v~~~~~~ 265 (314)
. .|.+|++. +++... ....+...+..++|+| +|++|++++.+ +.|.+|++...
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 3 89999996 554432 1222344567789999 89999999875 89999998765
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=1.6e-20 Score=175.19 Aligned_cols=221 Identities=10% Similarity=0.125 Sum_probs=158.8
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCc----eEEEEEccCCCEEEEEeC---------CCcEEEEEc
Q 021319 71 QLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGE----NINITYKPDGTHIAVGNR---------DDELTILDV 137 (314)
Q Consensus 71 ~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~---------d~~i~i~d~ 137 (314)
.+.|+|++ .+++ .+.|++|++||..+++.......... ...++|+|||++|+.++. ++.+.+||+
T Consensus 20 ~~~~s~dg-~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQ-EYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSS-EEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCC-eEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 67899986 4554 45799999999999887655543322 668999999999998876 689999999
Q ss_pred cCCeEeeeeccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeee-eecccce-----------------EEEEE
Q 021319 138 RKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTV-VAHTAGC-----------------YCIAI 199 (314)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~i-----------------~~i~~ 199 (314)
.+.+.+........+..++|+|+|+.++++. ++.+++|+....+..... .++...+ .+++|
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred CCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 8887632223334678899999999988875 679999998766543322 2222212 48999
Q ss_pred CCCCCEEEEeeCCC----------------------------------eEEEeeCCCcEEE---E-----EeeecccCeE
Q 021319 200 DPMGRYFAVGSADS----------------------------------LVSLWDISEMLCV---R-----TFTKLEWPVR 237 (314)
Q Consensus 200 ~~~~~~l~t~~~dg----------------------------------~i~vwd~~~~~~~---~-----~~~~~~~~v~ 237 (314)
+|||++||.++.|. .|++||+.++... + .+..+...+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE
Confidence 99999999887652 7889999877542 1 1224566789
Q ss_pred EEEEccCCcEEEEecC--C--ceEEEEE----CCCCCeEEEE-----eccCccc-----eeEEcCCCCeeEEEec
Q 021319 238 TISFSHTGDYIASASE--D--LFIDISN----VHTGRTVHQI-----PCRAAMN-----SVEWNPKYNLLAYAGD 294 (314)
Q Consensus 238 ~~~~sp~~~~l~s~s~--d--~~v~v~~----~~~~~~~~~~-----~~~~~i~-----~v~~~~~~~~la~~~~ 294 (314)
.++||||++++++... + ..|.+|| ..+++....+ .+...+. .++|+|+++.|+....
T Consensus 257 ~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 331 (719)
T 1z68_A 257 WLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFS 331 (719)
T ss_dssp EEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEE
T ss_pred EeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEE
Confidence 9999999988887442 2 4588899 7776544322 2344566 8999999997776433
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=3.2e-19 Score=164.92 Aligned_cols=279 Identities=8% Similarity=-0.052 Sum_probs=183.7
Q ss_pred ccceeeecccccEEEEEECCCCCEEEEe--eCCCcEEEeecCCCCCCceeeEEeecCCCCEE---------EEEEc--CC
Q 021319 11 LHSREYTGHKKKVHSVAWNCTGTKLASG--SVDQTARVWHIEPHGHGKVKDIELRGHADSVD---------QLCWD--PK 77 (314)
Q Consensus 11 ~~~~~~~gH~~~V~~v~~s~~g~~l~s~--~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~---------~l~~~--~~ 77 (314)
+..+.+.+|...|..++|++++-++++. +.++..+||..... +. ...+..|...+. ...|+ |+
T Consensus 14 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~--~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD 89 (662)
T 3azo_A 14 IDAALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD--GA--EESALPAPWNVRNRVFEYSGFPWAGVPRPA 89 (662)
T ss_dssp CCHHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT--SC--EEESSCTTCCBCCCGGGTCCCCEEEECCSS
T ss_pred CCHHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC--CC--cceeCCCCccccccccccCCccceeeeecC
Confidence 3455678899999999999988778887 66889999987432 22 224555655555 55565 88
Q ss_pred CCC-EEEEEeCCCcEEEEeCC--C-CceeeeEEe-----cCceEEEEEccCCCEEEEEeCC----------CcEEEEEcc
Q 021319 78 HAD-LIATASGDKTVRLWDAR--S-GKCSQQAEL-----SGENINITYKPDGTHIAVGNRD----------DELTILDVR 138 (314)
Q Consensus 78 ~~~-~l~s~~~D~~v~iwd~~--~-~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~ 138 (314)
+.. ++++...+..|.+++.. . +........ ......++|+|||+.|+.++.+ ..|.+||+.
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 169 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLD 169 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETT
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECC
Confidence 765 44444446677777775 3 443222221 2234578999999999988776 479999987
Q ss_pred C------CeEeeee-ccCcceeeEEeccCCCeEEEEcCC--------ceEEEEeCC-CC---CceeeeeecccceEEEEE
Q 021319 139 K------FKPIHRR-KFGYEVNEIAWNMTGEMFFLTTGN--------GTVEVLTYP-SL---RPLDTVVAHTAGCYCIAI 199 (314)
Q Consensus 139 ~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~-~~---~~~~~~~~~~~~i~~i~~ 199 (314)
. .+...-. .....+..++|+|+|+.+++...+ ..+++|+.. +. +.......|...+..++|
T Consensus 170 ~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~ 249 (662)
T 3azo_A 170 GSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEW 249 (662)
T ss_dssp STTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEE
T ss_pred CCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEE
Confidence 7 4433222 233456778999999998876633 478899887 34 222233345678999999
Q ss_pred CCCCCEEEEeeCCC--eEEEeeCCCcEEEEEeeecccC--------eEEEEEccCCcEEEEecCCceEEEE--ECCCCCe
Q 021319 200 DPMGRYFAVGSADS--LVSLWDISEMLCVRTFTKLEWP--------VRTISFSHTGDYIASASEDLFIDIS--NVHTGRT 267 (314)
Q Consensus 200 ~~~~~~l~t~~~dg--~i~vwd~~~~~~~~~~~~~~~~--------v~~~~~sp~~~~l~s~s~d~~v~v~--~~~~~~~ 267 (314)
+|||+++++++.++ .|.+||+.+++.......+... +..++|+|+++++++++. +.+++| |..+++
T Consensus 250 spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~- 327 (662)
T 3azo_A 250 APDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE- 327 (662)
T ss_dssp CTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-
T ss_pred CCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-
Confidence 99999888888888 5666676566544332222111 567899999999999999 999999 554444
Q ss_pred EEEEec-cCcccee-EEcCCCCeeEEEecC
Q 021319 268 VHQIPC-RAAMNSV-EWNPKYNLLAYAGDD 295 (314)
Q Consensus 268 ~~~~~~-~~~i~~v-~~~~~~~~la~~~~d 295 (314)
+..+.. ...+..+ +++++.-.+++++.+
T Consensus 328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 357 (662)
T 3azo_A 328 LVDAAGPWTEWAATLTVSGTRAVGVAASPR 357 (662)
T ss_dssp EEECCSSCCEEEEEEEEETTEEEEEEEETT
T ss_pred EEEecCCCCeEEEEEecCCCEEEEEEcCCC
Confidence 555542 3456666 554433333444433
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=3.2e-17 Score=135.73 Aligned_cols=240 Identities=13% Similarity=0.144 Sum_probs=172.5
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEe----ecCCCCEEEEEEcCCCCCEEEEEeC-CCcEE
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL----RGHADSVDQLCWDPKHADLIATASG-DKTVR 92 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~----~~h~~~v~~l~~~~~~~~~l~s~~~-D~~v~ 92 (314)
+|.....+++++++|+++++...++.|++|+.+. ........ .+|...+..+++.+.++.++++... ++.|+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g---~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG---RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS---CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCC---cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 4567899999999999999988899999998752 11211111 1345678899995334556665533 89999
Q ss_pred EEeCCCCceeeeEEe--cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec---cCcceeeEEeccCCCeEEEE
Q 021319 93 LWDARSGKCSQQAEL--SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTGEMFFLT 167 (314)
Q Consensus 93 iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 167 (314)
+|| .+++....... ......+++.++++++++...++.|.+||... +.+.... ....+..++++++++.+++.
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 999 45665544422 13466799999999887777788999999643 3333332 22357889999999988877
Q ss_pred cCCceEEEEeCCCCCceeeeeec--ccceEEEEECCCCCEEEEeeCCC-eEEEeeCCCcEEEEEeeeccc--CeEEEEEc
Q 021319 168 TGNGTVEVLTYPSLRPLDTVVAH--TAGCYCIAIDPMGRYFAVGSADS-LVSLWDISEMLCVRTFTKLEW--PVRTISFS 242 (314)
Q Consensus 168 ~~~g~~~~~~~~~~~~~~~~~~~--~~~i~~i~~~~~~~~l~t~~~dg-~i~vwd~~~~~~~~~~~~~~~--~v~~~~~s 242 (314)
..++.+.+|+... +.+..+..+ ...+..++++++|+++++...++ .|.+||. ++..+..+..+.. .+..++++
T Consensus 182 ~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 182 NRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 8889999998643 334444332 35689999999999888887776 9999996 4555666654332 36789999
Q ss_pred cCCcEEEEecCCceEEEEECCCC
Q 021319 243 HTGDYIASASEDLFIDISNVHTG 265 (314)
Q Consensus 243 p~~~~l~s~s~d~~v~v~~~~~~ 265 (314)
|+|+++++ +.|+.|.+|+....
T Consensus 260 ~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 260 DDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCcEEEE-CCCCeEEEEEcccc
Confidence 99998877 57999999997654
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=1.4e-17 Score=142.74 Aligned_cols=263 Identities=11% Similarity=0.090 Sum_probs=177.8
Q ss_pred eecccccEEEEEECCCCCEEEEee----------CCCcEEEeecCCCCCCceeeEEeec----CCCCEEEEEEcCCCCCE
Q 021319 16 YTGHKKKVHSVAWNCTGTKLASGS----------VDQTARVWHIEPHGHGKVKDIELRG----HADSVDQLCWDPKHADL 81 (314)
Q Consensus 16 ~~gH~~~V~~v~~s~~g~~l~s~~----------~D~~v~iw~~~~~~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~ 81 (314)
+..+..+ .++|+|||+++.++. .+++|.+||..+.. ....+.+.. +......++++|++. +
T Consensus 47 i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--~~~~i~~~~~~~~~g~~p~~i~~spdg~-~ 121 (361)
T 2oiz_A 47 VPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--FEKEISLPPKRVQGLNYDGLFRQTTDGK-F 121 (361)
T ss_dssp EECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--EEEEEEECTTBCCBCCCGGGEEECTTSS-E
T ss_pred ecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--EEEEEEcCccccccCCCcceEEECCCCC-E
Confidence 4444444 899999999988876 36789999986532 222222221 223456789999864 5
Q ss_pred EEEEe-C-CCcEEEEeCCCCceeee-EEecCceEEEEEccCC-CEEEEEeCCCcEEEEEccC-CeEeee------eccCc
Q 021319 82 IATAS-G-DKTVRLWDARSGKCSQQ-AELSGENINITYKPDG-THIAVGNRDDELTILDVRK-FKPIHR------RKFGY 150 (314)
Q Consensus 82 l~s~~-~-D~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~-~~~~~~------~~~~~ 150 (314)
|+++. . +++|.+||+.+++.... ..... ...+.+.|++ ..+++.+.|+.+.+++... .+.... .....
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~ 200 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKD 200 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTT
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCC
Confidence 55554 3 68999999999877665 43322 2224456665 5667778888888888754 332211 11111
Q ss_pred ceeeEEeccCCCeEEEEcCCceEEEEeCCCCCce--eeeee------c----ccceEEEEECCCCCEEEEeeC-------
Q 021319 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPL--DTVVA------H----TAGCYCIAIDPMGRYFAVGSA------- 211 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~------~----~~~i~~i~~~~~~~~l~t~~~------- 211 (314)
....+..++++..++....++.+.++++...... ..+.. + ......++++|+++.++++..
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~ 280 (361)
T 2oiz_A 201 DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT 280 (361)
T ss_dssp SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC
T ss_pred CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc
Confidence 1122333566667777777889999987543311 11110 0 111223789999887766543
Q ss_pred ----CCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCC--CeEEEE-eccCccceeEEcC
Q 021319 212 ----DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTG--RTVHQI-PCRAAMNSVEWNP 284 (314)
Q Consensus 212 ----dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~--~~~~~~-~~~~~i~~v~~~~ 284 (314)
.+.|.+||+.+++.+.++..+. +..++|+|+|++|++++. +.|.+||..++ +.+..+ ......+.++++|
T Consensus 281 ~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 281 HKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp TTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred ccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 3489999999999999988776 899999999999998887 99999999999 888886 4566778999999
Q ss_pred CCC
Q 021319 285 KYN 287 (314)
Q Consensus 285 ~~~ 287 (314)
+|.
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 985
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=6.3e-19 Score=165.01 Aligned_cols=260 Identities=10% Similarity=0.130 Sum_probs=171.4
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCC-----EEEEEEcCCCCCEEEEEeCC------
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADS-----VDQLCWDPKHADLIATASGD------ 88 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~~l~s~~~D------ 88 (314)
.....++.|+|||++++++ |+.|++|++.+.. ....+.+|... ...++|+|++ +.|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGN----SSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCC----EEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECSSS
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCc----eEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeEEE
Confidence 3456789999999999886 9999999997643 12235555532 2447899985 577777776
Q ss_pred ---CcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCc---------------
Q 021319 89 ---KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY--------------- 150 (314)
Q Consensus 89 ---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------------- 150 (314)
+.+.+||+.++++.............+|+|||+.|+.+ .++.|.+||+...+...-...+.
T Consensus 89 ~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred ccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence 55669999998865544444567789999999999888 46899999987765432111111
Q ss_pred ----ceeeEEeccCCCeEEEEcC-CceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCC---
Q 021319 151 ----EVNEIAWNMTGEMFFLTTG-NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE--- 222 (314)
Q Consensus 151 ----~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~--- 222 (314)
....+.|+|+|+.++.... ++.+..|.+....... .+......+.+.+.|.. .....|.+||+.+
T Consensus 168 e~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~---~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~ 240 (740)
T 4a5s_A 168 EVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES---LQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSS 240 (740)
T ss_dssp HTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT---CSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCS
T ss_pred hhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC---CCCCcceeecCCCCcCc----CCeeEEEEEECCCCCC
Confidence 1134889999998887653 3335555432111000 12334566666666542 1223689999988
Q ss_pred c---EEEEEeee------cccCeEEEEEccCCcEEEEec----CCceEEEEECCCCC------eEEEE---eccCccc--
Q 021319 223 M---LCVRTFTK------LEWPVRTISFSHTGDYIASAS----EDLFIDISNVHTGR------TVHQI---PCRAAMN-- 278 (314)
Q Consensus 223 ~---~~~~~~~~------~~~~v~~~~~sp~~~~l~s~s----~d~~v~v~~~~~~~------~~~~~---~~~~~i~-- 278 (314)
+ +.. .+.. +...+..++|+|||+.++... .+..|.+||+.+++ .+..+ .+...+.
T Consensus 241 ~~~~~~~-~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~ 319 (740)
T 4a5s_A 241 VTNATSI-QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRF 319 (740)
T ss_dssp SSCCCEE-EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSS
T ss_pred CCcceEE-EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccC
Confidence 6 333 3322 556688999999999766543 34579999998887 11211 2233333
Q ss_pred ---eeEEcCCCCeeE-EEecC
Q 021319 279 ---SVEWNPKYNLLA-YAGDD 295 (314)
Q Consensus 279 ---~v~~~~~~~~la-~~~~d 295 (314)
.++|+||++.|+ +.++.
T Consensus 320 ~~~~p~fspDG~~l~~~~s~~ 340 (740)
T 4a5s_A 320 RPSEPHFTLDGNSFYKIISNE 340 (740)
T ss_dssp SCCCCEECTTSSEEEEEEECT
T ss_pred cCCCceEcCCCCEEEEEEEcC
Confidence 789999999888 66643
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.82 E-value=1.7e-17 Score=141.09 Aligned_cols=265 Identities=9% Similarity=0.081 Sum_probs=175.0
Q ss_pred ccEEEEEECCCCCEEEEee---------CCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC---
Q 021319 21 KKVHSVAWNCTGTKLASGS---------VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD--- 88 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~---------~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D--- 88 (314)
..+..+++ ||++++... .++.|.+|+++... .. .+ ..+..+.|+|++ +.|+..+.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~---~~--~l----~~~~~~~~SpDg-~~la~~~~~~~~ 82 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA---RR--FI----ENATMPRISPDG-KKIAFMRANEEK 82 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC---EE--EE----ESCEEEEECTTS-SEEEEEEEETTT
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc---eE--Ec----ccCCCeEECCCC-CEEEEEEeccCC
Confidence 45777888 898877642 36678889886532 11 23 457889999986 466655543
Q ss_pred C--cEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCC---------------------------CcEEEEEccC
Q 021319 89 K--TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD---------------------------DELTILDVRK 139 (314)
Q Consensus 89 ~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---------------------------~~i~i~d~~~ 139 (314)
+ .|.+||+.+++......... ...+.|+|||+.|+.++.+ ..|.+||+..
T Consensus 83 ~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 83 KVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp TEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred CcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 3 47778888877655544444 6678999999999887632 4688899987
Q ss_pred CeEeeeeccCcceeeEEeccCCCeEEEEcCC------c-eEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCC
Q 021319 140 FKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN------G-TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD 212 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g-~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~d 212 (314)
.+.+...... .+..+.|+|++ .++++..+ . ...+|.+... ....+..+ ..+..+ +|+|+.|+.++.+
T Consensus 162 ~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~l~~~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 162 EEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-KEEKMFEK-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp TEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-EEEEEEEE-ESEEEE--EECSSCEEEEECC
T ss_pred CeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-ceEEeccC-cceeeE--CCCCCEEEEEEcc
Confidence 7653332223 67788999999 66666433 1 3344443322 23344444 444444 9999988877644
Q ss_pred --------CeEEEeeCCCcEEEEEeeecccCeEE-EEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccceeEEc
Q 021319 213 --------SLVSLWDISEMLCVRTFTKLEWPVRT-ISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWN 283 (314)
Q Consensus 213 --------g~i~vwd~~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~ 283 (314)
..|.+|| ++........++..+.. +.|+ ++ ++++++.++.+++| +.+++..........|.+++|+
T Consensus 236 ~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s 310 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVD 310 (347)
T ss_dssp SSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEES
T ss_pred ccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeee
Confidence 3688888 45444334445667876 8999 88 99999999999999 8766654444456679999999
Q ss_pred CCCCeeEEEecCC---cccccccce-EEecccc
Q 021319 284 PKYNLLAYAGDDK---NKYQADEGV-FRIYGFE 312 (314)
Q Consensus 284 ~~~~~la~~~~d~---~~~~~~~~~-~~~~~~~ 312 (314)
| .++++++.+. .+|..+ |+ .++.+++
T Consensus 311 ~--~~~~~~~~~~~~~~l~~~~-g~~~~lt~~n 340 (347)
T 2gop_A 311 E--IVVYLKETATRLRELFTWD-GEEKQLTDYN 340 (347)
T ss_dssp S--SEEEEEECSSSCCEEEEES-SSEEECCCTT
T ss_pred C--cEEEEEcCCCChHHheEeC-CcEEEecccc
Confidence 9 5666666554 356555 43 3444443
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=8.7e-17 Score=136.07 Aligned_cols=266 Identities=9% Similarity=0.071 Sum_probs=187.7
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~ 100 (314)
..|.++.|++++..+++.+.++.++.|.-. ....+..+...+.+++|++++ ++++++..++.|.+||..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE-------PWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE-------EEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCC
T ss_pred cccceeeecCCccceeEEeecccCcccccc-------eeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCc
Confidence 357788999999888888889999999321 223456677778999999875 577788889999999998887
Q ss_pred eeeeE-EecCceEEEEEccCCCEEEEEeCC----CcEEEEEccCCeEeeee---ccCcceeeEEeccCCCeEEEEcC---
Q 021319 101 CSQQA-ELSGENINITYKPDGTHIAVGNRD----DELTILDVRKFKPIHRR---KFGYEVNEIAWNMTGEMFFLTTG--- 169 (314)
Q Consensus 101 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--- 169 (314)
..... .....+..++++|+++++++...+ +.|.+||....+..... .....+..+++++++..+++...
T Consensus 78 ~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 78 IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS 157 (333)
T ss_dssp EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBT
T ss_pred EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccc
Confidence 65433 233556789999999988777666 68999998765433211 12345788999999988776654
Q ss_pred ---CceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEE-EeeCCCeEEEeeCCC-cEEEEE-----eeec--ccCeE
Q 021319 170 ---NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFA-VGSADSLVSLWDISE-MLCVRT-----FTKL--EWPVR 237 (314)
Q Consensus 170 ---~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-t~~~dg~i~vwd~~~-~~~~~~-----~~~~--~~~v~ 237 (314)
.+.+..++....+ ...+..+...+..++++|+++.++ +.+.++.|.+||+.+ +..+.. +... ...+.
T Consensus 158 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPD 236 (333)
T ss_dssp TBCCEEEEEECTTSCC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEE
T ss_pred cCCCceEEEEeCCCCE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCC
Confidence 3556666554333 223333344578999999998654 445678999999853 221111 1111 13577
Q ss_pred EEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccC-------ccceeEEcCCCCeeEEEecCC
Q 021319 238 TISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-------AMNSVEWNPKYNLLAYAGDDK 296 (314)
Q Consensus 238 ~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~-------~i~~v~~~~~~~~la~~~~d~ 296 (314)
.++++++|+++++...++.|.+|+. +++.+..+.... .+.+++|+|++..|..++.++
T Consensus 237 ~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 237 SCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred ceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 8999999999888888899999998 567776665432 588999999987766555543
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=2e-16 Score=130.95 Aligned_cols=235 Identities=10% Similarity=0.118 Sum_probs=170.5
Q ss_pred cCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEec-------CceEEEEE-ccCCCEEEEEeC-CCcEEE
Q 021319 64 GHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS-------GENINITY-KPDGTHIAVGNR-DDELTI 134 (314)
Q Consensus 64 ~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~l~~~~~-d~~i~i 134 (314)
++...+.++++++++ +++++...++.|++||.. ++........ ..+..+++ .+++.++++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCC-CEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 455678899999874 688888889999999987 5544433221 24567888 467766666543 789999
Q ss_pred EEccCCeEeeeecc--CcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeee--ecccceEEEEECCCCCEEEEee
Q 021319 135 LDVRKFKPIHRRKF--GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVV--AHTAGCYCIAIDPMGRYFAVGS 210 (314)
Q Consensus 135 ~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~t~~ 210 (314)
|| ...+.+..... ...+..+++.+++..+++...++.+.+|+.. .+.+..+. .+...+..++++++|+++++..
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 99 44554444432 2357889999999988887888999999854 33333332 2345689999999999888888
Q ss_pred CCCeEEEeeCCCcEEEEEeeec--ccCeEEEEEccCCcEEEEecCCc-eEEEEECCCCCeEEEEeccC---ccceeEEcC
Q 021319 211 ADSLVSLWDISEMLCVRTFTKL--EWPVRTISFSHTGDYIASASEDL-FIDISNVHTGRTVHQIPCRA---AMNSVEWNP 284 (314)
Q Consensus 211 ~dg~i~vwd~~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~s~s~d~-~v~v~~~~~~~~~~~~~~~~---~i~~v~~~~ 284 (314)
.++.|++||.. +..+..+... ...+..++++|+|+++++...++ .|.+|+. +++.+..+.... .+.+++++|
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEET
T ss_pred CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECC
Confidence 89999999974 4455555433 24678999999999999888886 9999995 567776665322 367899999
Q ss_pred CCCeeEEEecCCcccccccceEEeccccC
Q 021319 285 KYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 285 ~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+++++++ +.| +.++||.+..
T Consensus 261 ~g~l~vs-~~~--------~~v~v~~~~~ 280 (286)
T 1q7f_A 261 DGSVVLA-SKD--------YRLYIYRYVQ 280 (286)
T ss_dssp TTEEEEE-ETT--------TEEEEEECSC
T ss_pred CCcEEEE-CCC--------CeEEEEEccc
Confidence 9987776 434 5788998753
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=1.1e-16 Score=135.50 Aligned_cols=236 Identities=14% Similarity=0.107 Sum_probs=172.0
Q ss_pred CCCEEEEEEcCCCCCEEEEEeCC------------------------CcEEEEeCCCCceeeeEEe--cCceEEEEEccC
Q 021319 66 ADSVDQLCWDPKHADLIATASGD------------------------KTVRLWDARSGKCSQQAEL--SGENINITYKPD 119 (314)
Q Consensus 66 ~~~v~~l~~~~~~~~~l~s~~~D------------------------~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~ 119 (314)
.+.+.+++++|++ +++++...+ ++|.+||..+++....... ...+..++++|+
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 4568899999874 677777777 4799999988887654321 135677999999
Q ss_pred CCEEEEEeCCCcEEEEEccCCe-Eeeeec----------cCcceeeEEecc-CCCeEEEEc-CCceEEEEeCCCCCceee
Q 021319 120 GTHIAVGNRDDELTILDVRKFK-PIHRRK----------FGYEVNEIAWNM-TGEMFFLTT-GNGTVEVLTYPSLRPLDT 186 (314)
Q Consensus 120 ~~~l~~~~~d~~i~i~d~~~~~-~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~~~~~~ 186 (314)
|+++++...++.|.+||..... .+.... .......+++++ ++..+++.. .++.+.+|+. ..+.+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEE
Confidence 9988888888999999975431 222221 112477899999 788888876 6899999984 4444444
Q ss_pred eeec----------ccceEEEEECCC-CCEEEEeeCCCeEEEeeCCCcEEEEEeee--cccCeEEEEEccCCcEEEEe--
Q 021319 187 VVAH----------TAGCYCIAIDPM-GRYFAVGSADSLVSLWDISEMLCVRTFTK--LEWPVRTISFSHTGDYIASA-- 251 (314)
Q Consensus 187 ~~~~----------~~~i~~i~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~s~-- 251 (314)
+... -..+..++++|+ ++++++...++.|++||..+++.+..+.. +...+..++|+| +..+++.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 4322 233889999998 77778888889999999987888777743 445688999999 4444443
Q ss_pred -----cCCceEEEEECCCCCeEEEEe----ccCccceeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 252 -----SEDLFIDISNVHTGRTVHQIP----CRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 252 -----s~d~~v~v~~~~~~~~~~~~~----~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+.+..+.+|+..+++.+..+. ......+|+++|++.++++...+ +.+++|+++
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~--------~~I~~~~~~ 321 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT--------NTVWKFTLT 321 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSS--------CCEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCC--------CEEEEEeCC
Confidence 344589999999999888874 23458899999999777766655 467777663
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=1.4e-16 Score=134.82 Aligned_cols=239 Identities=11% Similarity=0.026 Sum_probs=174.2
Q ss_pred cccEEEEEECCCCCEEEEeeCC------------------------CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEc
Q 021319 20 KKKVHSVAWNCTGTKLASGSVD------------------------QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD 75 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D------------------------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 75 (314)
.+.+.+|+++|+|+++++...+ +.|.+||.++. ........++......++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEECTTTCSSEEEEEEC
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccCCCccCCceEEEEC
Confidence 4679999999999999998877 47899987643 22222222455678899999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCc-eeeeEEe----------cCceEEEEEcc-CCCEEEEEe-CCCcEEEEEccCCeE
Q 021319 76 PKHADLIATASGDKTVRLWDARSGK-CSQQAEL----------SGENINITYKP-DGTHIAVGN-RDDELTILDVRKFKP 142 (314)
Q Consensus 76 ~~~~~~l~s~~~D~~v~iwd~~~~~-~~~~~~~----------~~~~~~~~~~~-~~~~l~~~~-~d~~i~i~d~~~~~~ 142 (314)
|++ +++++...++.|++||..... ....+.. ...+..++++| ++.++++.+ .++.|.+||. ..+.
T Consensus 100 ~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~ 177 (329)
T 3fvz_A 100 TDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKF 177 (329)
T ss_dssp TTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCE
T ss_pred CCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCE
Confidence 875 588888889999999986442 2222211 12466799999 788887776 6899999994 4444
Q ss_pred eeeecc-C----------cceeeEEeccC-CCeEEEEcCCceEEEEeCCCCCceeeee--ecccceEEEEECC------C
Q 021319 143 IHRRKF-G----------YEVNEIAWNMT-GEMFFLTTGNGTVEVLTYPSLRPLDTVV--AHTAGCYCIAIDP------M 202 (314)
Q Consensus 143 ~~~~~~-~----------~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~i~~~~------~ 202 (314)
+..... + .....++++++ +..+++...++.+.+|+..+.+.+..+. .+...+..++++| +
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 257 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVN 257 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeC
Confidence 433321 1 23678999998 7777888889999999987666665553 3556788999999 3
Q ss_pred CCEEEEeeCCCeEEEeeCCCcEEEEEee---ecccCeEEEEEccCCcEEEEecCCceEEEEECC
Q 021319 203 GRYFAVGSADSLVSLWDISEMLCVRTFT---KLEWPVRTISFSHTGDYIASASEDLFIDISNVH 263 (314)
Q Consensus 203 ~~~l~t~~~dg~i~vwd~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~ 263 (314)
++..++...+..|++||..+++.+..+. .+-..+..|+++|+|.++++...++.|++|+..
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 3333333344589999999998888773 344568899999999999999999999999864
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=1.9e-16 Score=135.61 Aligned_cols=254 Identities=15% Similarity=0.088 Sum_probs=170.5
Q ss_pred CCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEe----------CCCcEEEEeCCCCceeeeEEec-
Q 021319 40 VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS----------GDKTVRLWDARSGKCSQQAELS- 108 (314)
Q Consensus 40 ~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----------~D~~v~iwd~~~~~~~~~~~~~- 108 (314)
.|+.|.+||.++.. .. ..+..+..+ .++++|++ ++++++. .+++|.+||..+.+........
T Consensus 29 ~d~~v~v~D~~t~~---~~-~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 29 TESRVHVYDYTNGK---FL-GMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp GGCEEEEEETTTCC---EE-EEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred ccCeEEEEECCCCe---EE-EEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 47899999976532 22 244555544 88999986 4666554 3678999999988887766543
Q ss_pred ------CceEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeee-eccCcceeeEEeccCC-CeEEEEcCCceEEEEeC
Q 021319 109 ------GENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHR-RKFGYEVNEIAWNMTG-EMFFLTTGNGTVEVLTY 178 (314)
Q Consensus 109 ------~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~ 178 (314)
.....++++|||++|+++.. ++.|.+||+.+.+.+.. +..+.. ..+...|.+ ..+++.+.+|.+.++..
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 23446889999999998864 57899999999888776 554322 224455554 56677778888888876
Q ss_pred CC-CCceee------eeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCc--EEEEEeeecc----------cCeEEE
Q 021319 179 PS-LRPLDT------VVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEM--LCVRTFTKLE----------WPVRTI 239 (314)
Q Consensus 179 ~~-~~~~~~------~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~--~~~~~~~~~~----------~~v~~~ 239 (314)
.. .+.... +..... ...+.+++++..++..+.++.|.++|+... .....+.... .....+
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 181 GEDGKVASQSRSKQMFSVKDD-PIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp CTTSSEEEEEECCCCSCTTTS-CBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCCcEeeeccccceEcCCCC-ceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 43 222211 111111 112233566767776778899999998643 2223221110 111237
Q ss_pred EEccCCcEEEEecC-----------CceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEEe
Q 021319 240 SFSHTGDYIASASE-----------DLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRI 308 (314)
Q Consensus 240 ~~sp~~~~l~s~s~-----------d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~ 308 (314)
+|+|+++.++.+.. +..|.+||..+++.+..++... ..+++|+|++++|++++. +++.|
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~---------~~v~v 329 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG---------GNVNV 329 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS---------SCEEE
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC---------CeEEE
Confidence 89999887776532 3589999999999999988777 999999999998887763 56777
Q ss_pred cccc
Q 021319 309 YGFE 312 (314)
Q Consensus 309 ~~~~ 312 (314)
|+.+
T Consensus 330 ~D~~ 333 (361)
T 2oiz_A 330 YDIS 333 (361)
T ss_dssp EECS
T ss_pred EECC
Confidence 7654
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=9.5e-16 Score=127.57 Aligned_cols=232 Identities=13% Similarity=0.063 Sum_probs=164.2
Q ss_pred eecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCe
Q 021319 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFK 141 (314)
Q Consensus 62 ~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 141 (314)
+..+.....+++|+|++..+++++..++.|..||..++ ..........+..++++++|+++++...++.|.+||..+.+
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 44556667899999986447888889999999999877 32222223456789999999988777777899999986655
Q ss_pred Eeeeec--c---CcceeeEEeccCCCeEEEEc-----------------CCceEEEEeCCCCCceeeeeecccceEEEEE
Q 021319 142 PIHRRK--F---GYEVNEIAWNMTGEMFFLTT-----------------GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAI 199 (314)
Q Consensus 142 ~~~~~~--~---~~~~~~~~~~~~~~~~~~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 199 (314)
...... . ...+..++++++|..+++.. ..+.+..++.. ..+..+..+...+..++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLSAPIRDRVKPNGLAF 179 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEEEEECCCSSEEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEEEeecCCCCCccEEE
Confidence 332211 1 12356789999999887632 13455555543 334444455566889999
Q ss_pred CCCCCEEEEeeCCCeEEEeeCC-CcEE---EEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccC
Q 021319 200 DPMGRYFAVGSADSLVSLWDIS-EMLC---VRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA 275 (314)
Q Consensus 200 ~~~~~~l~t~~~dg~i~vwd~~-~~~~---~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~ 275 (314)
+|+++.+++.+.++.|.+||+. ++.. ...+......+..++++|+|++.++. ++.|.+|+.. ++.+..+....
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~ 256 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQ 256 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSS
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCC
Confidence 9999988777778999999986 4443 23332233456789999999987766 7889999986 77777776443
Q ss_pred ccceeEE-cCCCCeeEEEecCCcccc
Q 021319 276 AMNSVEW-NPKYNLLAYAGDDKNKYQ 300 (314)
Q Consensus 276 ~i~~v~~-~~~~~~la~~~~d~~~~~ 300 (314)
.+++++| .|+++.|..++.+ .+|.
T Consensus 257 ~~~~~~f~~~d~~~L~v~t~~-~l~~ 281 (296)
T 3e5z_A 257 TTSNLCFGGPEGRTLYMTVST-EFWS 281 (296)
T ss_dssp CCCEEEEESTTSCEEEEEETT-EEEE
T ss_pred CceeEEEECCCCCEEEEEcCC-eEEE
Confidence 4999999 6898888777755 3444
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.76 E-value=3.1e-15 Score=124.42 Aligned_cols=241 Identities=10% Similarity=0.042 Sum_probs=169.6
Q ss_pred eeeecccccEEEEEECCCCC-EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEE
Q 021319 14 REYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVR 92 (314)
Q Consensus 14 ~~~~gH~~~V~~v~~s~~g~-~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~ 92 (314)
+.+..+.....+++|+|+|+ .++++..++.|..|+.+.. . ..+..+...+.++++++++ .++++...++.|.
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~----~--~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ----L--SPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLE 93 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC----E--EEEESSCSSEEEEEECTTC-CEEEEETTTTEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC----e--EEEECCCCCcceeeECCCC-cEEEEecCCCeEE
Confidence 44556677889999999998 7888888999999997642 2 2344567789999999875 5777777779999
Q ss_pred EEeCCCCceeeeEEec-----CceEEEEEccCCCEEEEE----e-------------CCCcEEEEEccCCeEeeeeccCc
Q 021319 93 LWDARSGKCSQQAELS-----GENINITYKPDGTHIAVG----N-------------RDDELTILDVRKFKPIHRRKFGY 150 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~----~-------------~d~~i~i~d~~~~~~~~~~~~~~ 150 (314)
+||..+++........ .....+++.|+|+++++. + ..+.|..++.. .+.........
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV 172 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC
Confidence 9999888754432211 122358899999988863 2 13456666654 33222222334
Q ss_pred ceeeEEeccCCCeEEEEcCCceEEEEeCC-CCCc---eeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEE
Q 021319 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYP-SLRP---LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCV 226 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~---~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~ 226 (314)
....++|+|+++.+++...++.+.+|+.. ..+. ...+..+...+..++++++|++.++. ++.|.+||.. ++.+
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 56789999999988667778999999875 2222 12222244556789999999977666 7889999986 6667
Q ss_pred EEeeecccCeEEEEE-ccCCcEEEEecCCceEEEEECCCCCe
Q 021319 227 RTFTKLEWPVRTISF-SHTGDYIASASEDLFIDISNVHTGRT 267 (314)
Q Consensus 227 ~~~~~~~~~v~~~~~-sp~~~~l~s~s~d~~v~v~~~~~~~~ 267 (314)
..+..+.. +.+++| +|+++.|+.++.++ +.-++..+.+.
T Consensus 250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 250 GRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp EEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred EEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 77766665 889999 58999999888875 44445555443
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=9.4e-16 Score=129.62 Aligned_cols=260 Identities=9% Similarity=0.035 Sum_probs=180.3
Q ss_pred CCCcEEEeecCCCCCCceeeEEee-----cCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEE
Q 021319 40 VDQTARVWHIEPHGHGKVKDIELR-----GHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINI 114 (314)
Q Consensus 40 ~D~~v~iw~~~~~~~~~~~~~~~~-----~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 114 (314)
.+++|.++|.++.. ....... ........+++.. +.+.++...++.|.+||..+++....+.....+..+
T Consensus 15 ~~~~l~~~d~~t~~---~~~~i~~~~n~~~lg~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCE---VENEVFYRANGFKLGDVAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTE---EECSHHHHHHSSCCBSCEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEE
T ss_pred CCceEEEEECCCCE---EhhhhHhhhcCcccCccceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEE
Confidence 48899999987532 1110000 1123456777753 456677777899999999999987777655667788
Q ss_pred EEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCc------ceeeEEeccCCCeEEEEc-CCceEEEEeCCCCCceeee
Q 021319 115 TYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY------EVNEIAWNMTGEMFFLTT-GNGTVEVLTYPSLRPLDTV 187 (314)
Q Consensus 115 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 187 (314)
+++++++..++...++.|.++|+.+.+....+..+. ....+++ ..+..+++.. .++.+.+++..+.+....+
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i 168 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDEL 168 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEE
Confidence 998898544444478999999999988777666555 5667777 4444444444 4889999998877665555
Q ss_pred eecccceEEEEECCCCCEEEEeeCC----------CeEEEeeCCCcEEEEEeeec-ccCeEEEEEccCCcEEEEecCCce
Q 021319 188 VAHTAGCYCIAIDPMGRYFAVGSAD----------SLVSLWDISEMLCVRTFTKL-EWPVRTISFSHTGDYIASASEDLF 256 (314)
Q Consensus 188 ~~~~~~i~~i~~~~~~~~l~t~~~d----------g~i~vwd~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~s~s~d~~ 256 (314)
.. ...+..++++|+|++++++..+ +.|.++|..+++..+.+... ......++|+|++++|..+.. .
T Consensus 169 ~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~ 245 (328)
T 3dsm_A 169 TI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D 245 (328)
T ss_dssp EC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S
T ss_pred Ec-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E
Confidence 43 3456789999999988777655 78999999988877666432 235789999999998887765 8
Q ss_pred EEEEECCCCCeEEE--Eec-cCccceeEEcCC-CCeeEEEecCCcccccccceEEecccc
Q 021319 257 IDISNVHTGRTVHQ--IPC-RAAMNSVEWNPK-YNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 257 v~v~~~~~~~~~~~--~~~-~~~i~~v~~~~~-~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
|.++|..+++.... +.. ......++++|+ +.++++...| | ...|.+.+|+.+
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~---y-~~~~~V~v~d~~ 301 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAID---Y-QQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTT---S-SSEEEEEEECTT
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccc---c-ccCCEEEEECCC
Confidence 99999988775421 121 346789999994 5555544111 1 124667777653
No 178
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.75 E-value=4.2e-16 Score=145.90 Aligned_cols=263 Identities=13% Similarity=0.143 Sum_probs=167.7
Q ss_pred EEEEECCCCCEEEEeeCC---------CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 24 HSVAWNCTGTKLASGSVD---------QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 24 ~~v~~s~~g~~l~s~~~D---------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
.++.|||||++|+.++.+ +.+.+||++++. ...+..|...+...+|+|++. .|+.+ .|+.|.+|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~-----~~~l~~~~~~~~~~~~SPdG~-~la~~-~~~~i~~~ 137 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-----LITEERIPNNTQWVTWSPVGH-KLAYV-WNNDIYVK 137 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-----ECCSSCCCTTEEEEEECSSTT-CEEEE-ETTEEEEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc-----EEEcccCCCcceeeEECCCCC-EEEEE-ECCeEEEE
Confidence 458899999999999887 455699987632 224567788899999999864 56666 46899999
Q ss_pred eCCCCceeeeEEec-------------------CceEEEEEccCCCEEEEEeCCC-------------------------
Q 021319 95 DARSGKCSQQAELS-------------------GENINITYKPDGTHIAVGNRDD------------------------- 130 (314)
Q Consensus 95 d~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l~~~~~d~------------------------- 130 (314)
|..++...+..... +....+.|+|||+.|+....|.
T Consensus 138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~ 217 (740)
T 4a5s_A 138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP 217 (740)
T ss_dssp SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEE
T ss_pred ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeec
Confidence 99887654321111 1112478999999999875332
Q ss_pred -----------cEEEEEccC---C---eEeeeec------cCcceeeEEeccCCCeEEEEcC----CceEEEEeCCCCC-
Q 021319 131 -----------ELTILDVRK---F---KPIHRRK------FGYEVNEIAWNMTGEMFFLTTG----NGTVEVLTYPSLR- 182 (314)
Q Consensus 131 -----------~i~i~d~~~---~---~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~- 182 (314)
.+.+||+.+ . +...... ....+..++|+|+++.++.... ...+.+|+..+.+
T Consensus 218 yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~ 297 (740)
T 4a5s_A 218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSG 297 (740)
T ss_dssp CCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTT
T ss_pred CCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcc
Confidence 367788876 5 2221111 2344678899999986655432 3468888876655
Q ss_pred -----ceeee--eecccceE-----EEEECCCCCEEE-Eee-CCC--eEEEeeCCCcEEEEEeeecccCeEEEEEccCCc
Q 021319 183 -----PLDTV--VAHTAGCY-----CIAIDPMGRYFA-VGS-ADS--LVSLWDISEMLCVRTFTKLEWPVRTISFSHTGD 246 (314)
Q Consensus 183 -----~~~~~--~~~~~~i~-----~i~~~~~~~~l~-t~~-~dg--~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~ 246 (314)
....+ ..|...+. ..+|+|||+.++ ..+ .+| .|.+||...+... .+....+.+..+.. ++++
T Consensus 298 ~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~ 375 (740)
T 4a5s_A 298 RWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSD 375 (740)
T ss_dssp EEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSS
T ss_pred ccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCC
Confidence 12222 33444433 678999999876 554 444 5888888765443 45555677776542 4455
Q ss_pred E-EEEecC----CceEEEEEC--CCCCeEEEEec-----cCccceeEEcCCCCeeEEEecC
Q 021319 247 Y-IASASE----DLFIDISNV--HTGRTVHQIPC-----RAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 247 ~-l~s~s~----d~~v~v~~~--~~~~~~~~~~~-----~~~i~~v~~~~~~~~la~~~~d 295 (314)
. +++++. .+..+||.+ ..+.....+.+ ......+.|+|++..++.....
T Consensus 376 ~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~ 436 (740)
T 4a5s_A 376 YLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSG 436 (740)
T ss_dssp EEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECS
T ss_pred EEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCC
Confidence 4 445554 234455544 33333223332 2467899999999887655543
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=2.8e-15 Score=126.70 Aligned_cols=251 Identities=8% Similarity=0.038 Sum_probs=180.5
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~ 100 (314)
.....+.+. +++..++...++.|.+||.++.. .+. .+. .......+++++++ .+.++...++.|.+||..+++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--~~~--~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--EVG--RIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYE 116 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--EEE--EEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccE--EEE--EcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCe
Confidence 346777774 45566667778999999987632 112 233 34567889998775 555555589999999999998
Q ss_pred eeeeEEecC------ceEEEEEccCCCEEEEEe--CCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEEcCC--
Q 021319 101 CSQQAELSG------ENINITYKPDGTHIAVGN--RDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGN-- 170 (314)
Q Consensus 101 ~~~~~~~~~------~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 170 (314)
......... ....+++ ++..++++. .++.|.++|+.+.+.+..+..+.....+.++++++.+++...+
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~ 194 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYE 194 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCT
T ss_pred EEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCcc
Confidence 777666554 4555666 345555554 4889999999999888877777677889999999877776654
Q ss_pred --------ceEEEEeCCCCCceeeeeec-ccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEE-E-eeecccCeEEE
Q 021319 171 --------GTVEVLTYPSLRPLDTVVAH-TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVR-T-FTKLEWPVRTI 239 (314)
Q Consensus 171 --------g~~~~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~-~-~~~~~~~v~~~ 239 (314)
+.+.+++..+.+....+... ...+..++++|+++.|.++.. .|.+||..+++... . +.........+
T Consensus 195 ~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi 272 (328)
T 3dsm_A 195 GSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGL 272 (328)
T ss_dssp TCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEE
T ss_pred CCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEE
Confidence 78999998776655444322 236899999999998887765 89999998765431 1 11113457889
Q ss_pred EEcc-CCcEEEEe----cCCceEEEEECCCCCeEEEEeccCccceeEEc
Q 021319 240 SFSH-TGDYIASA----SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWN 283 (314)
Q Consensus 240 ~~sp-~~~~l~s~----s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~ 283 (314)
+++| ++.+.++. ..++.|.+||.. ++.+..+.....-..++|-
T Consensus 273 ~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~ 320 (328)
T 3dsm_A 273 TVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWK 320 (328)
T ss_dssp EECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEE
T ss_pred EEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEe
Confidence 9999 56666666 678999999998 9999888765556666663
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=6.8e-16 Score=142.65 Aligned_cols=250 Identities=13% Similarity=-0.015 Sum_probs=158.9
Q ss_pred eeeecccccEE---------EEEEC--CCCCE-EEEeeC-CCcEEEeecCCCCCCceeeEEeec-----CCCCEEEEEEc
Q 021319 14 REYTGHKKKVH---------SVAWN--CTGTK-LASGSV-DQTARVWHIEPHGHGKVKDIELRG-----HADSVDQLCWD 75 (314)
Q Consensus 14 ~~~~gH~~~V~---------~v~~s--~~g~~-l~s~~~-D~~v~iw~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~ 75 (314)
+.+..|...+. ...|+ |||+. |+.++. +..|.+|+++....+.. ..+.. |...+..++|+
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~--~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP--RPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC--EECSCCCCSTTCEEEEEEEEE
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC--EeccCCccCCCCccccCcEEC
Confidence 45666665655 56565 99998 776553 44454444430010111 23334 66778899999
Q ss_pred CCCCCEEEEEeCC----------CcEEEEeCCC------CceeeeE-EecCceEEEEEccCCCEEEEEeCCC--------
Q 021319 76 PKHADLIATASGD----------KTVRLWDARS------GKCSQQA-ELSGENINITYKPDGTHIAVGNRDD-------- 130 (314)
Q Consensus 76 ~~~~~~l~s~~~D----------~~v~iwd~~~------~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~-------- 130 (314)
|++ +.|++++.| ..|.+||+.+ +...... ........++|+|||+.|+..+.++
T Consensus 139 pDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~ 217 (662)
T 3azo_A 139 PER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGT 217 (662)
T ss_dssp TTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCE
T ss_pred CCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCc
Confidence 986 577777766 5899999987 5543332 2223344578999999999877543
Q ss_pred cEEEEEcc-CC---eEeeeec-cCcceeeEEeccCCCeEEEEcCCc--eEEEEeCCCCCceeeeeecccc--------eE
Q 021319 131 ELTILDVR-KF---KPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNG--TVEVLTYPSLRPLDTVVAHTAG--------CY 195 (314)
Q Consensus 131 ~i~i~d~~-~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~--------i~ 195 (314)
.|.+||+. +. +...... ....+..+.|+|+++.++++..++ .+..++....+.......+... +.
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMR 297 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCC
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCc
Confidence 69999998 45 3222222 245678899999999777777777 5555655444332222222221 46
Q ss_pred EEEECCCCCEEEEeeCCCeEEEe--eCCCcEEEEEeeecccCeEEE-EEccCCcEEEEecCCc--eEEEEECCCCCeE
Q 021319 196 CIAIDPMGRYFAVGSADSLVSLW--DISEMLCVRTFTKLEWPVRTI-SFSHTGDYIASASEDL--FIDISNVHTGRTV 268 (314)
Q Consensus 196 ~i~~~~~~~~l~t~~~dg~i~vw--d~~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~s~s~d~--~v~v~~~~~~~~~ 268 (314)
.++|+|++++++++.. +.+++| |+..+. ++.+..+...+..+ +++++.-++++++.+. .+.++|..+++..
T Consensus 298 ~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 298 WFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp SEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred eEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 7899999999999998 999999 555554 56666666667766 5544444555666664 4555676676643
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=6.5e-16 Score=133.31 Aligned_cols=249 Identities=11% Similarity=0.032 Sum_probs=157.4
Q ss_pred EeecCCCCEEE-----EEEcCCCCCEEEEEeC-CCc--EEEEeCCCCceeeeEEecCceE-EEEEccCCCEEEEEeCCCc
Q 021319 61 ELRGHADSVDQ-----LCWDPKHADLIATASG-DKT--VRLWDARSGKCSQQAELSGENI-NITYKPDGTHIAVGNRDDE 131 (314)
Q Consensus 61 ~~~~h~~~v~~-----l~~~~~~~~~l~s~~~-D~~--v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~d~~ 131 (314)
.+..|...... .+|+|++ +.|+.++. ++. |.+||+.+++............ ...|+||++.|+.+..+..
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~ 103 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDG-SKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRN 103 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTE
T ss_pred EecCCcccccchhhcCccCCCCC-CEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCe
Confidence 45566655555 7899986 46666665 674 7888998887655443333232 5679999999999999999
Q ss_pred EEEEEccCCeEeeeeccCcc-eeeE--EeccCCCeEEEE----------------------cCCceEEEEeCCCCCceee
Q 021319 132 LTILDVRKFKPIHRRKFGYE-VNEI--AWNMTGEMFFLT----------------------TGNGTVEVLTYPSLRPLDT 186 (314)
Q Consensus 132 i~i~d~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~----------------------~~~g~~~~~~~~~~~~~~~ 186 (314)
+.+||+.+.+.......... .... ..++++..++.. .....+.++++...+. ..
T Consensus 104 l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~ 182 (388)
T 3pe7_A 104 LMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-TV 182 (388)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-EE
T ss_pred EEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-EE
Confidence 99999988765543332221 2222 347888877642 1346788888876643 34
Q ss_pred eeecccceEEEEECC-CCCEEEEeeCC------CeEEEeeCCCcEEEEEeeecc--cCeEEEEEccCCcEEEEecCC---
Q 021319 187 VVAHTAGCYCIAIDP-MGRYFAVGSAD------SLVSLWDISEMLCVRTFTKLE--WPVRTISFSHTGDYIASASED--- 254 (314)
Q Consensus 187 ~~~~~~~i~~i~~~~-~~~~l~t~~~d------g~i~vwd~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~s~s~d--- 254 (314)
+..+...+..++|+| +|+.|+....+ ..|.++|..... .+.+..+. ..+...+|+|||+.|+..+.+
T Consensus 183 l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (388)
T 3pe7_A 183 ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGS 261 (388)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTC
T ss_pred eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEecCCCC
Confidence 445666789999999 99988876653 368888876543 33343333 247788999999988765432
Q ss_pred --ceEEEEECCCCCeEEEEeccC------ccceeEEcCCCCeeEEEecCCcccc-cccceEEecccc
Q 021319 255 --LFIDISNVHTGRTVHQIPCRA------AMNSVEWNPKYNLLAYAGDDKNKYQ-ADEGVFRIYGFE 312 (314)
Q Consensus 255 --~~v~v~~~~~~~~~~~~~~~~------~i~~v~~~~~~~~la~~~~d~~~~~-~~~~~~~~~~~~ 312 (314)
..|.+||+.+++......... ....++|+|+++.|++...+...|. .....+.+|+++
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 262 PDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 249999999987533222111 1345689999999887654321111 123456666653
No 182
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=2.6e-13 Score=112.41 Aligned_cols=265 Identities=11% Similarity=0.025 Sum_probs=186.3
Q ss_pred eecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q 021319 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (314)
Q Consensus 16 ~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd 95 (314)
+..+...+.+++++++|...++...++.|.+|+.+ . .........+...+..+++++++ .+.++...++.|..||
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~---~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G---KITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRIT 84 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C---CEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C---CeEEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEEC
Confidence 34556789999999999988887778899999875 2 22333333455678999999864 5777766688999999
Q ss_pred CCCCceeeeEEe---cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee-e-ccCcceeeEEeccCCCeEEEEcCC
Q 021319 96 ARSGKCSQQAEL---SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR-R-KFGYEVNEIAWNMTGEMFFLTTGN 170 (314)
Q Consensus 96 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
.. ++. ..... ......+++.+++.++++...++.+..+|. ..+.... . .....+..+++.+++..+++....
T Consensus 85 ~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 161 (299)
T 2z2n_A 85 KK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQN 161 (299)
T ss_dssp TT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC
Confidence 86 443 22221 234567889999988877777888999998 4332221 1 123457788899999888877778
Q ss_pred ceEEEEeCCCCCceee-eeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEE-eeecccCeEEEEEccCCcEE
Q 021319 171 GTVEVLTYPSLRPLDT-VVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRT-FTKLEWPVRTISFSHTGDYI 248 (314)
Q Consensus 171 g~~~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l 248 (314)
+.+..++. ..+.... .......+..+++++++++.++...++.|..||. ++..... .......+..++++|+|++.
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLW 239 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEE
Confidence 89999987 4332221 2223456889999999998777767889999998 5543321 22233568899999999988
Q ss_pred EEecCCceEEEEECCCCCeEEEEec---cCccceeEEcCCCCeeEEEe
Q 021319 249 ASASEDLFIDISNVHTGRTVHQIPC---RAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 249 ~s~s~d~~v~v~~~~~~~~~~~~~~---~~~i~~v~~~~~~~~la~~~ 293 (314)
++...++.|..++. +++ +..+.. ...+.++++ +++.+.++.+
T Consensus 240 v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 240 FTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAME 284 (299)
T ss_dssp EEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEET
T ss_pred EeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEec
Confidence 87777889999998 443 444432 246889999 8888776554
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=4.3e-14 Score=119.44 Aligned_cols=234 Identities=10% Similarity=0.029 Sum_probs=159.5
Q ss_pred eeecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC----Cc
Q 021319 15 EYTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD----KT 90 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D----~~ 90 (314)
.+.++...+.+++|+++|++++++..++.|.+|+.+... ... ....+...+.+++++|++ +++++...+ +.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~---~~~-~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE---IKR-PFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC---EEE-EEECSSSSEEEEEECTTS-CEEEEECTTSSSCCE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc---EEE-EeeCCCCCcceEEECCCC-cEEEEeCCCCCCCce
Confidence 455677778999999999988888889999999876432 222 122466789999999875 577776666 68
Q ss_pred EEEEeCCCCceeeeEE---ecCceEEEEEccCCCEEEEEeC------CCcEEEEEccCCeEeeeeccCcceeeEEeccCC
Q 021319 91 VRLWDARSGKCSQQAE---LSGENINITYKPDGTHIAVGNR------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTG 161 (314)
Q Consensus 91 v~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (314)
|.+||..++....... .......+.++|+|+++++... .+.|..+|....+.............++|++++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE 193 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC
Confidence 9999998776543221 1234567899999987776653 245666666543332211222346788999999
Q ss_pred CeEE-EEcCCceEEEEeCCC-CCceeee-----eecc--cceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeec
Q 021319 162 EMFF-LTTGNGTVEVLTYPS-LRPLDTV-----VAHT--AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKL 232 (314)
Q Consensus 162 ~~~~-~~~~~g~~~~~~~~~-~~~~~~~-----~~~~--~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~ 232 (314)
+.++ +...++.+.+|+... ...+..+ .... ..+..++++++|+++++...++.|.+||. +++.+..+...
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIP 272 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECT
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcC
Confidence 8554 445678999998753 2222111 1111 35788999999998888777899999998 45556666443
Q ss_pred cc------CeEEEEEccCCcEEEEecCC
Q 021319 233 EW------PVRTISFSHTGDYIASASED 254 (314)
Q Consensus 233 ~~------~v~~~~~sp~~~~l~s~s~d 254 (314)
.. .+.+++|+|+++.|+.++.+
T Consensus 273 ~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 273 GRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCccccccCcceEEECCCCCEEEEEeCc
Confidence 32 57899999998777655554
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.73 E-value=5.7e-15 Score=121.58 Aligned_cols=209 Identities=12% Similarity=0.053 Sum_probs=165.5
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeeEEecC--ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccC--cceee
Q 021319 79 ADLIATASGDKTVRLWDARSGKCSQQAELSG--ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG--YEVNE 154 (314)
Q Consensus 79 ~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~ 154 (314)
+++|++++.|+.|.+||..+|+.+..+.... ....+.+.|+|++++ +.++.+..+|. +.+.+.++..+ ..+..
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 3689999999999999998999887776654 456788999999888 45778999998 78877777654 46778
Q ss_pred EEeccCCCeEEEEcC-CceEEEEeCCCCCceeeee------ecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEE
Q 021319 155 IAWNMTGEMFFLTTG-NGTVEVLTYPSLRPLDTVV------AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVR 227 (314)
Q Consensus 155 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~------~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~ 227 (314)
+.+.++++.+++... ++.+..++. ..+.+..+. .+...+..+++.++|+++++...++.|..||.. ++.+.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 889999999998877 777877764 444443332 112234566789999999999999999999987 88888
Q ss_pred EeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccC-------ccceeEEcCCCCeeEEEe
Q 021319 228 TFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRA-------AMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 228 ~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~-------~i~~v~~~~~~~~la~~~ 293 (314)
++.... .+.++...|+|.++++++.++.|..+|..+|+.+.++.... -+.+++.-++++++++..
T Consensus 160 ~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 160 SVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEECSS-CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEECCC-CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 876543 45567888999999999999999999999999999986321 267888899999998773
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=5.1e-15 Score=137.97 Aligned_cols=243 Identities=12% Similarity=0.013 Sum_probs=164.0
Q ss_pred cccccEEEEEECCCCCEEEEeeCCC-----cEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc--
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQ-----TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT-- 90 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~-----~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~-- 90 (314)
+|...+..++|||||++|+.++.++ .|++||++++. .....+.. ..+..++|+|++ +.|+.++.|+.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~---~~~~~~~~--~~~~~~~wspDg-~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK---ELPDVLER--VKFSCMAWTHDG-KGMFYNAYPQQDG 195 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE---EEEEEEEE--ECSCCEEECTTS-SEEEEEECCCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC---CCcccccC--cccceEEEEeCC-CEEEEEEECCccc
Confidence 3545789999999999998776543 89999997632 22222222 225678999985 56777777765
Q ss_pred --------------EEEEeCCCCceeeeE--Ee---cCceEEEEEccCCCEEEEEeC-----CCcEEEEEccC------C
Q 021319 91 --------------VRLWDARSGKCSQQA--EL---SGENINITYKPDGTHIAVGNR-----DDELTILDVRK------F 140 (314)
Q Consensus 91 --------------v~iwd~~~~~~~~~~--~~---~~~~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~------~ 140 (314)
|.+|++.++...... .. ......+.|+|||++|+.... +..+.++|+.. .
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 999999877632111 11 122467899999999987764 56799999875 3
Q ss_pred e-EeeeeccCcceeeEEeccCCCeEEEEcC----CceEEEEeCCCCCc--eeeeeeccc--ceEEEEECCCCCEEEEeeC
Q 021319 141 K-PIHRRKFGYEVNEIAWNMTGEMFFLTTG----NGTVEVLTYPSLRP--LDTVVAHTA--GCYCIAIDPMGRYFAVGSA 211 (314)
Q Consensus 141 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~--~~~~~~~~~--~i~~i~~~~~~~~l~t~~~ 211 (314)
. ...............|++++..+++.+. .+.+.+++...... ...+..|.. .+..+++++++.++++...
T Consensus 276 ~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 276 ILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp SCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred ccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 2 1222222111122357788887776654 34688888765532 244444544 5778889888888888888
Q ss_pred CCe--EEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEe----cCCceEEEEECCCCC
Q 021319 212 DSL--VSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASA----SEDLFIDISNVHTGR 266 (314)
Q Consensus 212 dg~--i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~----s~d~~v~v~~~~~~~ 266 (314)
++. |.+||+.+++.++.+..+...+..++++|+++.++.. ...+.+..||+.+++
T Consensus 356 ~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 356 DVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 884 6667776777667776666678889999998766522 235789999998876
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=4.2e-15 Score=121.73 Aligned_cols=239 Identities=10% Similarity=-0.022 Sum_probs=166.8
Q ss_pred cEEEEEECCCCCEEE-EeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 021319 22 KVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (314)
Q Consensus 22 ~V~~v~~s~~g~~l~-s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~ 100 (314)
...+++++++|+.++ +...++.|.+|+..... ... ....+...+.++++++++ +++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~---~~~-~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG---TTV-LPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC--------EE-CCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc---cce-EeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCce
Confidence 788999999999887 55778999999864321 111 112333567789999874 5666555 8899999987654
Q ss_pred eeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeecc-CcceeeEEeccCCCeEEEEcCCceEEEEeC
Q 021319 101 CSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLTTGNGTVEVLTY 178 (314)
Q Consensus 101 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 178 (314)
....... ......+++.++++.+++...++.|.+++..+......... ...+..+++++++..+++...++.+.+|+.
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 3322111 14567899999999777777788899998665433222111 235678899999998777777889999987
Q ss_pred CCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEE
Q 021319 179 PSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFID 258 (314)
Q Consensus 179 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~ 258 (314)
...........+...+..++++++|.++++...++.|.+||.............-..+..++++|+|+++++.+.++.|.
T Consensus 179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred CCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 65543322223335689999999998888777788999999876543322112224588999999999999999999999
Q ss_pred EEECCCCC
Q 021319 259 ISNVHTGR 266 (314)
Q Consensus 259 v~~~~~~~ 266 (314)
+++....+
T Consensus 259 ~~~~~~~~ 266 (270)
T 1rwi_B 259 KLTSLEHH 266 (270)
T ss_dssp EECCCGGG
T ss_pred EEcCCCcc
Confidence 99886544
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=2.3e-13 Score=122.73 Aligned_cols=258 Identities=14% Similarity=0.088 Sum_probs=181.2
Q ss_pred CCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCC--CCceeeeEEe
Q 021319 30 CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR--SGKCSQQAEL 107 (314)
Q Consensus 30 ~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~--~~~~~~~~~~ 107 (314)
|.+.++++...++.|.++|.++.. +. ..+. ....+..+.++|++ .++++++.|+.|.+||+. +++.+.....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~---v~-~~i~-~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYE---IK-TVLD-TGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCC---EE-EEEE-CSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred CCceEEEEeCCCCeEEEEECCCCe---EE-EEEe-CCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence 444567788889999999987632 22 1232 23456789999985 577788899999999996 7777777766
Q ss_pred cCceEEEEEc----cCCCEEEEEe-CCCcEEEEEccCCeEeeeeccCc------------ceeeEEeccCCCeEEEE-cC
Q 021319 108 SGENINITYK----PDGTHIAVGN-RDDELTILDVRKFKPIHRRKFGY------------EVNEIAWNMTGEMFFLT-TG 169 (314)
Q Consensus 108 ~~~~~~~~~~----~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~ 169 (314)
......++++ |||++++++. .++.+.++|..+.+++..+.... .+..+..++.+..+++. .+
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 6677889999 6999888765 46889999999988877654321 34566667776655554 56
Q ss_pred CceEEEEeCCCCCceeee-eecccceEEEEECCCCCEEEEee-CCCeEEEeeCCCcEEEEEeee-cc--cCeEEEE-Ecc
Q 021319 170 NGTVEVLTYPSLRPLDTV-VAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTFTK-LE--WPVRTIS-FSH 243 (314)
Q Consensus 170 ~g~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~~~-~~--~~v~~~~-~sp 243 (314)
.|.+.++++...+.+... .........+.|+|+++++++++ .++.|.++|+.+++.+..+.. .. .+-.... ++|
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p 398 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHP 398 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEET
T ss_pred CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECC
Confidence 699999998765432211 12234466889999999876655 568899999999987776643 22 1112223 578
Q ss_pred CC-cEEEEec-CCceEEEEECCC-------CCeEEEEeccC-ccceeEEcCCCCeeEEEe
Q 021319 244 TG-DYIASAS-EDLFIDISNVHT-------GRTVHQIPCRA-AMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 244 ~~-~~l~s~s-~d~~v~v~~~~~-------~~~~~~~~~~~-~i~~v~~~~~~~~la~~~ 293 (314)
++ .+.+++. .++.|.++|..+ .+.++.++..+ .-.-|+.||+++.|....
T Consensus 399 ~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 399 TFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred CCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 74 4555553 468999999987 56777776533 335588999998876655
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=2.5e-14 Score=133.27 Aligned_cols=261 Identities=8% Similarity=0.001 Sum_probs=170.3
Q ss_pred CCCCEEEEeeCCC---cEEEeecCCCCCCceeeEE----eecCCCCEEEEEEcCCCCCEEEEEeCC-C----cEEEEeCC
Q 021319 30 CTGTKLASGSVDQ---TARVWHIEPHGHGKVKDIE----LRGHADSVDQLCWDPKHADLIATASGD-K----TVRLWDAR 97 (314)
Q Consensus 30 ~~g~~l~s~~~D~---~v~iw~~~~~~~~~~~~~~----~~~h~~~v~~l~~~~~~~~~l~s~~~D-~----~v~iwd~~ 97 (314)
|+|++++-...++ .-.+|-.+........... ..+|...+..++|+|++. +|+.++.+ | .|++||+.
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGE-YFAYGLSASGSDWVTIKFMKVD 159 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSS-EEEEEEEETTCSCEEEEEEETT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCC-EEEEEEcCCCCceEEEEEEECC
Confidence 8888766554322 2246655432211111110 123444688999999864 66544443 3 89999999
Q ss_pred CCceeeeEEecCceEEEEEccCCCEEEEEeCCCc----------------EEEEEccCCeE----eeeec-cCcceeeEE
Q 021319 98 SGKCSQQAELSGENINITYKPDGTHIAVGNRDDE----------------LTILDVRKFKP----IHRRK-FGYEVNEIA 156 (314)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~----------------i~i~d~~~~~~----~~~~~-~~~~~~~~~ 156 (314)
+++.............++|+|||+.|+.+..++. |.+|++.+.+. +.... .......+.
T Consensus 160 tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 160 GAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 9886653222222346899999999999887765 99999876542 22211 123356789
Q ss_pred eccCCCeEEEEcC-----CceEEEEeCCC------CC-ceeeeeecccceEEEEECCCCCEEEEeeCC----CeEEEeeC
Q 021319 157 WNMTGEMFFLTTG-----NGTVEVLTYPS------LR-PLDTVVAHTAGCYCIAIDPMGRYFAVGSAD----SLVSLWDI 220 (314)
Q Consensus 157 ~~~~~~~~~~~~~-----~g~~~~~~~~~------~~-~~~~~~~~~~~i~~i~~~~~~~~l~t~~~d----g~i~vwd~ 220 (314)
|+|+++.+++... +..++++++.. .. ....+..+...+.. .|+|+|+.|+..+.+ +.|.+||+
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~ 318 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDF 318 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEET
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 9999998887754 56888888764 32 34455555555544 488888877765543 36999999
Q ss_pred CCcE--EEEEeeeccc--CeEEEEEccCCcEEEEecCCce--EEEEECCCCCeEEEEec-cCccceeEEcCCCCeeEEE
Q 021319 221 SEML--CVRTFTKLEW--PVRTISFSHTGDYIASASEDLF--IDISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYA 292 (314)
Q Consensus 221 ~~~~--~~~~~~~~~~--~v~~~~~sp~~~~l~s~s~d~~--v~v~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~la~~ 292 (314)
.++. ..+.+..+.. .+..++|++++.++++...|+. |.+|+..+|+.++.+.. .+.+..++++|++..++..
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence 7753 1233333322 5778999988899999999985 56677767877666653 4568889999998766544
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=1.6e-14 Score=118.20 Aligned_cols=235 Identities=10% Similarity=-0.031 Sum_probs=160.7
Q ss_pred CEEEEEEcCCCCCEEE-EEeCCCcEEEEeCCCCceeeeEEe-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee
Q 021319 68 SVDQLCWDPKHADLIA-TASGDKTVRLWDARSGKCSQQAEL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR 145 (314)
Q Consensus 68 ~v~~l~~~~~~~~~l~-s~~~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 145 (314)
...++++++++ ++++ +...++.|.+||..++........ ......+++.++++++++.. ++.|.+||.........
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 56788999875 5666 557789999999765543221111 13455688999998665555 88999999866433221
Q ss_pred e-ccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE
Q 021319 146 R-KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (314)
Q Consensus 146 ~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~ 224 (314)
. .....+..+++.+++..+++...++.+..++................+..++++++|+++++...++.|.+||.....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 1 112457788999999988877788899998754433322222223457899999999988877778899999987765
Q ss_pred EEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec--cCccceeEEcCCCCeeEEEecCCcccccc
Q 021319 225 CVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC--RAAMNSVEWNPKYNLLAYAGDDKNKYQAD 302 (314)
Q Consensus 225 ~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~--~~~i~~v~~~~~~~~la~~~~d~~~~~~~ 302 (314)
...........+..++++|+|.++++...++.|.+|+....... .... ...+.++++.|+++++++...+
T Consensus 183 ~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~------- 254 (270)
T 1rwi_B 183 QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-VLPFTGLNTPLAVAVDSDRTVYVADRGN------- 254 (270)
T ss_dssp EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE-ECCCCSCSCEEEEEECTTCCEEEEEGGG-------
T ss_pred eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce-eeccCCCCCceeEEECCCCCEEEEECCC-------
Confidence 43322222246789999999988888888899999998654432 2222 2458899999999877766644
Q ss_pred cceEEeccccC
Q 021319 303 EGVFRIYGFEN 313 (314)
Q Consensus 303 ~~~~~~~~~~~ 313 (314)
+.+++|.+++
T Consensus 255 -~~v~~~~~~~ 264 (270)
T 1rwi_B 255 -DRVVKLTSLE 264 (270)
T ss_dssp -TEEEEECCCG
T ss_pred -CEEEEEcCCC
Confidence 6888988754
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=3.5e-15 Score=138.76 Aligned_cols=243 Identities=14% Similarity=0.005 Sum_probs=158.3
Q ss_pred cccccEEEEEECCCCCEEE-----EeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc--
Q 021319 18 GHKKKVHSVAWNCTGTKLA-----SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT-- 90 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~-----s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~-- 90 (314)
+|...+..++|||||++|+ +|+.+..|++||++++.. .....+.+.. ...++|+|++ ..|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~--~~~~~~~~~~--~~~~~wspDg-~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW--SKVDVIEGGK--YATPKWTPDS-KGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCB--CSSCCBSCCT--TCCCEECTTS-SEEEEEECCCCTT
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCC--cCCcccCccc--ccceEEecCC-CEEEEEEecCCCC
Confidence 4566799999999999988 555667999999976431 1011121111 1578999985 57778888776
Q ss_pred -----------EEEEeCCCCcee--eeEEe--c-CceEEEEEccCCCEEEEEeCCC----cEEEEEccCCeEeeeeccCc
Q 021319 91 -----------VRLWDARSGKCS--QQAEL--S-GENINITYKPDGTHIAVGNRDD----ELTILDVRKFKPIHRRKFGY 150 (314)
Q Consensus 91 -----------v~iwd~~~~~~~--~~~~~--~-~~~~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~ 150 (314)
|++|++.++... ..... . .....+.++|||++|+.++.++ .+.+++....+...-.....
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 272 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG 272 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC
Confidence 999999887632 11111 1 2456789999999998877665 56666654433222122222
Q ss_pred ceeeEEeccCCCeEEEEc---CCceEEEEeCCCCCc--eeeeeec--ccceEEEEECCCCCEEEEeeCCCeEEEeeCC-C
Q 021319 151 EVNEIAWNMTGEMFFLTT---GNGTVEVLTYPSLRP--LDTVVAH--TAGCYCIAIDPMGRYFAVGSADSLVSLWDIS-E 222 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~--~~~~~~~--~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~-~ 222 (314)
......+ +++..++.+. .++.+.+++...... ...+..+ ...+..++++ ++.++++...|+..++|.+. +
T Consensus 273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 3344445 5555444443 357888898865442 2333333 3357778887 67788899999988888654 3
Q ss_pred cEEEEEeeec-ccCeEEEEEccCCcEEE----EecCCceEEEEECCCCCe
Q 021319 223 MLCVRTFTKL-EWPVRTISFSHTGDYIA----SASEDLFIDISNVHTGRT 267 (314)
Q Consensus 223 ~~~~~~~~~~-~~~v~~~~~sp~~~~l~----s~s~d~~v~v~~~~~~~~ 267 (314)
+..++.+..+ ...+..++++|+++.++ +....+.+++||+.+++.
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 5555555443 44577788999998777 334458899999988764
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=2e-13 Score=123.05 Aligned_cols=268 Identities=12% Similarity=0.080 Sum_probs=184.1
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEc----CCCCCEEEEEeCCCcEEEEeC
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWD----PKHADLIATASGDKTVRLWDA 96 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~----~~~~~~l~s~~~D~~v~iwd~ 96 (314)
..++.+.|+|||+++.+++.|+.|.+||+.......+ .++.... ....++++ |++..++++.-.+++|.++|.
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 3577999999999999999999999999851111122 2333322 35688999 576555566666799999999
Q ss_pred CCCceeeeEEecC------------ceEEEEEccCCCEEEE-EeCCCcEEEEEccCCeEe--eeeccCcceeeEEeccCC
Q 021319 97 RSGKCSQQAELSG------------ENINITYKPDGTHIAV-GNRDDELTILDVRKFKPI--HRRKFGYEVNEIAWNMTG 161 (314)
Q Consensus 97 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~ 161 (314)
.+.+.+....... ....+..++++..+++ ...++.|.++|....+.. ..+..+.......|++++
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH 353 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCC
Confidence 9888776654321 3345777787665554 455688999998765432 233445556788999999
Q ss_pred CeEEEEc-CCceEEEEeCCCCCceeeeee-----cccceEEEEECCC-CCEEEEee-CCCeEEEeeCCC-------cEEE
Q 021319 162 EMFFLTT-GNGTVEVLTYPSLRPLDTVVA-----HTAGCYCIAIDPM-GRYFAVGS-ADSLVSLWDISE-------MLCV 226 (314)
Q Consensus 162 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~-----~~~~i~~i~~~~~-~~~l~t~~-~dg~i~vwd~~~-------~~~~ 226 (314)
++++++. .++.+.+++..+.+.+..+.. |.+....+ ++|+ +...+++. .++.|.++|..+ .+.+
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv 432 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKIL 432 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEE
Confidence 9887765 678999999988765544432 33222222 5787 44555554 468999999987 6677
Q ss_pred EEeeecccCeEEEEEccCCcEEEEecC-------CceEEEEECCCC-----CeE-EEEec---------cCccceeEEcC
Q 021319 227 RTFTKLEWPVRTISFSHTGDYIASASE-------DLFIDISNVHTG-----RTV-HQIPC---------RAAMNSVEWNP 284 (314)
Q Consensus 227 ~~~~~~~~~v~~~~~sp~~~~l~s~s~-------d~~v~v~~~~~~-----~~~-~~~~~---------~~~i~~v~~~~ 284 (314)
+++......-.-+..+|++++|..... ...|.|+|..+. ... ..++. ...+..++|+|
T Consensus 433 ~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (567)
T 1qks_A 433 DSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK 512 (567)
T ss_dssp EEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECT
T ss_pred EEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECC
Confidence 777654333344789999999887663 358999999876 222 33431 34688999999
Q ss_pred CCCeeEEE
Q 021319 285 KYNLLAYA 292 (314)
Q Consensus 285 ~~~~la~~ 292 (314)
+|..+..+
T Consensus 513 ~G~~~~~s 520 (567)
T 1qks_A 513 DGTEVWFS 520 (567)
T ss_dssp TSSEEEEE
T ss_pred CCCEEEEE
Confidence 99887655
No 192
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.70 E-value=1.6e-12 Score=107.76 Aligned_cols=263 Identities=10% Similarity=0.015 Sum_probs=184.5
Q ss_pred cccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q 021319 18 GHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~ 97 (314)
.....+.++.++++|...++...++.|.+|+.+ . ......+..+...+..+++++++ ++.++...++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~---~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G---RIKEFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S---CEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C---ceEEEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECCC
Confidence 445688999999999988888788999999865 2 23333344445678899998764 577766668899999987
Q ss_pred CCceeeeEEe---cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee-ec-cCcceeeEEeccCCCeEEEEcCCce
Q 021319 98 SGKCSQQAEL---SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR-RK-FGYEVNEIAWNMTGEMFFLTTGNGT 172 (314)
Q Consensus 98 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~g~ 172 (314)
++.. .... ......+++.+++++.++...++.+..+|.. .+.... .. ....+..+++.+++..+++...++.
T Consensus 92 -g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 92 -GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp -SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred -CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 5543 2222 2345678889999887777768889999987 333221 11 2345778889999997777777888
Q ss_pred EEEEeCCCCCcee-eeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEE-EeeecccCeEEEEEccCCcEEEE
Q 021319 173 VEVLTYPSLRPLD-TVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVR-TFTKLEWPVRTISFSHTGDYIAS 250 (314)
Q Consensus 173 ~~~~~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~s 250 (314)
+..++. ..+... ....+...+..++++++|++.++....+.|..||. ++.... .+......+.+++++|+|++.++
T Consensus 169 i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~ 246 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFT 246 (300)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEe
Confidence 988887 333221 11123456889999999988777767788999998 443322 22223446789999999998887
Q ss_pred ecCCceEEEEECCCCCeEEEEec---cCccceeEEcCCCCeeEEE
Q 021319 251 ASEDLFIDISNVHTGRTVHQIPC---RAAMNSVEWNPKYNLLAYA 292 (314)
Q Consensus 251 ~s~d~~v~v~~~~~~~~~~~~~~---~~~i~~v~~~~~~~~la~~ 292 (314)
...++.|..++. +++.. .+.. ...+.++++.|++++.++.
T Consensus 247 ~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 247 EWGANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp ETTTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred ccCCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEc
Confidence 777889999998 45433 3322 3468899999998866544
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.69 E-value=4.6e-14 Score=118.10 Aligned_cols=244 Identities=9% Similarity=-0.030 Sum_probs=163.4
Q ss_pred eeecccccEEEEEECCCCCEEEE-------eeCCCcEEEeecCCCCCCceeeEEe---ecCCCCEEEEEEcCCCCCEEEE
Q 021319 15 EYTGHKKKVHSVAWNCTGTKLAS-------GSVDQTARVWHIEPHGHGKVKDIEL---RGHADSVDQLCWDPKHADLIAT 84 (314)
Q Consensus 15 ~~~gH~~~V~~v~~s~~g~~l~s-------~~~D~~v~iw~~~~~~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~l~s 84 (314)
.+.+......+++|+++|..+++ +..++.|.+|+..... ...... .++...+..++++++++.++++
T Consensus 12 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~ 88 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK---KTVICKPEVNGYGGIPAGCQCDRDANQLFVA 88 (314)
T ss_dssp EEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC---EEEEECCEETTEECCEEEEEECSSSSEEEEE
T ss_pred hhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc---EEEEEecccCCCCCCCceEEEecCCCcEEEE
Confidence 34445556789999999998888 6778999999875432 222111 1245678899999873344444
Q ss_pred EeCCCcEEEEeCCCCceeee-EEec-----CceEEEEEccCCCEEEEEeCC---------------CcEEEEEccCCeEe
Q 021319 85 ASGDKTVRLWDARSGKCSQQ-AELS-----GENINITYKPDGTHIAVGNRD---------------DELTILDVRKFKPI 143 (314)
Q Consensus 85 ~~~D~~v~iwd~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~ 143 (314)
. .+..|.+||.. ++.... .... .....+++.++|++.++...+ +.+..+|.. .+..
T Consensus 89 ~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 89 D-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp E-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred E-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence 4 44579999988 665433 2111 224578899999887776554 467777765 3322
Q ss_pred eeeccCcceeeEEec----cCCCeEEEE-cCCceEEEEeCC-CCC-----ceeeeeecc-cceEEEEECCCCCEEEEeeC
Q 021319 144 HRRKFGYEVNEIAWN----MTGEMFFLT-TGNGTVEVLTYP-SLR-----PLDTVVAHT-AGCYCIAIDPMGRYFAVGSA 211 (314)
Q Consensus 144 ~~~~~~~~~~~~~~~----~~~~~~~~~-~~~g~~~~~~~~-~~~-----~~~~~~~~~-~~i~~i~~~~~~~~l~t~~~ 211 (314)
...........++++ ++++.++++ ..++.+.+|+.. ..+ ....+..+. ..+..++++++|+++++...
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 222222345778888 888655444 567899999864 222 111222232 55788999999998888878
Q ss_pred CCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEE-EEecCCceEEEEECCC
Q 021319 212 DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYI-ASASEDLFIDISNVHT 264 (314)
Q Consensus 212 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~s~d~~v~v~~~~~ 264 (314)
++.|.+||..+++.+..+..+...+.+++|+|++++| ++...++.|..+++..
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 8899999988666655665555678999999999944 5556678899998764
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=3.8e-14 Score=120.34 Aligned_cols=225 Identities=12% Similarity=0.039 Sum_probs=144.6
Q ss_pred ccEEEEEECCCCCEEEEeeCC---Cc--EEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeC--------
Q 021319 21 KKVHSVAWNCTGTKLASGSVD---QT--ARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG-------- 87 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D---~~--v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~-------- 87 (314)
..+..++|||||++|+.++.+ +. |.+|+++.. ... .+..+.. +..+.|+|++ +.|+.++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g---~~~--~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL---SSK--KILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDF 131 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT---EEE--EEEEESE-EEEEEECTTS-SEEEEEEECCCC----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC---ceE--EEEcCCC-ccceeECCCC-CEEEEEEccCCCcCCc
Confidence 457789999999999988754 34 555666532 222 2223334 8999999986 45555542
Q ss_pred -------------------CCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCC-------cEEEEEccCCe
Q 021319 88 -------------------DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDD-------ELTILDVRKFK 141 (314)
Q Consensus 88 -------------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~ 141 (314)
...|.+||+.+++....+... ....+.|+|+| +++++..+. ...+|.+...+
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE
T ss_pred EEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc
Confidence 257889999888763333323 55678899999 777775542 33444443333
Q ss_pred EeeeeccCcceeeEEeccCCCeEEEEcCC--------ceEEEEeCCCCCceeeeeecccceEE-EEECCCCCEEEEeeCC
Q 021319 142 PIHRRKFGYEVNEIAWNMTGEMFFLTTGN--------GTVEVLTYPSLRPLDTVVAHTAGCYC-IAIDPMGRYFAVGSAD 212 (314)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~i~~-i~~~~~~~~l~t~~~d 212 (314)
...-... .... .++|+|+.+++...+ ..+.+++ ..+.......+...+.. +.|+ ++ ++++++.+
T Consensus 210 ~~~l~~~-~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~ 282 (347)
T 2gop_A 210 EEKMFEK-VSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEE 282 (347)
T ss_dssp EEEEEEE-ESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEET
T ss_pred eEEeccC-ccee--eECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecC
Confidence 2221111 2233 338999988776543 3677776 33332223345566775 8999 88 88999999
Q ss_pred CeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceE-EEEECCCCC
Q 021319 213 SLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI-DISNVHTGR 266 (314)
Q Consensus 213 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v-~v~~~~~~~ 266 (314)
+.+++| +.+++... +..+...+.+++|+| .++++++.++.. .+|.+. ++
T Consensus 283 ~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 283 GSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE 332 (347)
T ss_dssp TEEEEE-EESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS
T ss_pred CcEEEE-EcCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc
Confidence 999999 87555433 334466789999999 677777777654 667665 44
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=1e-14 Score=135.56 Aligned_cols=261 Identities=11% Similarity=0.068 Sum_probs=168.7
Q ss_pred CCCCCEEEEeeCCC---cEEEeecCCCCCCceeeEE----eecCCCCEEEEEEcCCCCCEEE-----EEeCCCcEEEEeC
Q 021319 29 NCTGTKLASGSVDQ---TARVWHIEPHGHGKVKDIE----LRGHADSVDQLCWDPKHADLIA-----TASGDKTVRLWDA 96 (314)
Q Consensus 29 s~~g~~l~s~~~D~---~v~iw~~~~~~~~~~~~~~----~~~h~~~v~~l~~~~~~~~~l~-----s~~~D~~v~iwd~ 96 (314)
+|+|++++-...++ .-.||..+........... -.+|...+..++|+|++ ++|+ +|+.+..|++||+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEET
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEEC
Confidence 47899887776554 4567765432222111111 12455578899999986 4665 3444578999999
Q ss_pred CCCceeeeEEecCc-eEEEEEccCCCEEEEEeCCCc-------------EEEEEccCCe----Eeeeec-cCcceeeEEe
Q 021319 97 RSGKCSQQAELSGE-NINITYKPDGTHIAVGNRDDE-------------LTILDVRKFK----PIHRRK-FGYEVNEIAW 157 (314)
Q Consensus 97 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~~-------------i~i~d~~~~~----~~~~~~-~~~~~~~~~~ 157 (314)
.+++.......... ...++|+|||+.|+.++.+.. |.+|++.+.+ .+.... ....+..+.|
T Consensus 155 ~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 155 DSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp TTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 99876411112221 156889999999999888776 9999987654 222221 1235678899
Q ss_pred ccCCCeEEEEcCCc----eEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEee---CCCeEEEeeCCCcEE---EE
Q 021319 158 NMTGEMFFLTTGNG----TVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGS---ADSLVSLWDISEMLC---VR 227 (314)
Q Consensus 158 ~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~---~dg~i~vwd~~~~~~---~~ 227 (314)
+|+|+.+++...++ .+++++....+ ...+..+........+ ++|++++... .++.|.+||+.++.. ..
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEE
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeE
Confidence 99999888776554 55666543333 3445555555555555 5666444443 257899999976542 22
Q ss_pred Eeeec-ccCeEEEEEccCCcEEEEecCCceEEEEECC-CCCeEEEEec--cCccceeEEcCCCCeeEEEe
Q 021319 228 TFTKL-EWPVRTISFSHTGDYIASASEDLFIDISNVH-TGRTVHQIPC--RAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 228 ~~~~~-~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~-~~~~~~~~~~--~~~i~~v~~~~~~~~la~~~ 293 (314)
.+..+ ...+..++|+ ++.++++...|+..++|.+. +++.++.+.. .+.+..++++|++..++...
T Consensus 313 l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 381 (695)
T 2bkl_A 313 IVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVF 381 (695)
T ss_dssp EECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEE
T ss_pred EecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEE
Confidence 23222 4457888888 78899999999988888664 4666655542 45688999999987776443
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.68 E-value=2.2e-13 Score=112.06 Aligned_cols=233 Identities=12% Similarity=0.078 Sum_probs=171.0
Q ss_pred CCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCC-CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEec
Q 021319 30 CTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA-DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS 108 (314)
Q Consensus 30 ~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~ 108 (314)
..++.|++++.|+.|++||.+++. ...++..+. ..+.++.+.|++ ++++ +.++.|..||. +++.+......
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~----~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKE----IVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTE----EEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred CCCcEEEeeCCCCEEEEEECCCCe----EEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence 356889999999999999986532 223444444 467888999975 6777 45789999999 78877776653
Q ss_pred --CceEEEEEccCCCEEEEEeC-CCcEEEEEccCCeEeeeeccC-------cceeeEEeccCCCeEEEEcCCceEEEEeC
Q 021319 109 --GENINITYKPDGTHIAVGNR-DDELTILDVRKFKPIHRRKFG-------YEVNEIAWNMTGEMFFLTTGNGTVEVLTY 178 (314)
Q Consensus 109 --~~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 178 (314)
.....+.+.++|+.+++.+. ++.+..+|. ..+.+...... .....+...++++++++...++.+..|+.
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 24456788999999999887 777877775 55555443321 13445677889999999999999999998
Q ss_pred CCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeeccc------CeEEEEEccCCcEEEEec
Q 021319 179 PSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEW------PVRTISFSHTGDYIASAS 252 (314)
Q Consensus 179 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~------~v~~~~~sp~~~~l~s~s 252 (314)
. .+.+.++... ..+..+...++|+++++++.++.|..+|..+++.+.++...+. .+..++..++|.++++..
T Consensus 154 ~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 154 N-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp T-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred C-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 7 7766666543 4567788899999999998888999999998998888764321 267788889999988874
Q ss_pred CC--------ceEEEEEC-CCCCeEEEEec
Q 021319 253 ED--------LFIDISNV-HTGRTVHQIPC 273 (314)
Q Consensus 253 ~d--------~~v~v~~~-~~~~~~~~~~~ 273 (314)
.. +..+++++ .+|+.+.++..
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 232 QGHDREAGKGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp CTTCTTGGGSCCCSEEEECTTSBEEEEECC
T ss_pred cCccccccccCCceEEEECCCCCEEEEecC
Confidence 21 12345555 47777777653
No 197
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.67 E-value=4e-15 Score=128.50 Aligned_cols=233 Identities=11% Similarity=0.062 Sum_probs=147.9
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEE-------------------EEEcCCCCCEEEEE
Q 021319 25 SVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQ-------------------LCWDPKHADLIATA 85 (314)
Q Consensus 25 ~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~~l~s~ 85 (314)
.+.|+|||++|+.++.++.|++|+++... .. .....+...... ..|+|++. .++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~---~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~ 159 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLE---EQ-VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFA 159 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCC---EE-EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCC---cE-EEEecccccCCCCCEEEeccCCccccccccccccCCCCc-ceeee
Confidence 37899999999999999999999986532 11 112223222212 23455543 33322
Q ss_pred -----eCCCcEEEEeCCCCceeeeEEecCceEEEEEcc-CCCEEEEEeCC------CcEEEEEccCCeEeeeecc--Ccc
Q 021319 86 -----SGDKTVRLWDARSGKCSQQAELSGENINITYKP-DGTHIAVGNRD------DELTILDVRKFKPIHRRKF--GYE 151 (314)
Q Consensus 86 -----~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~--~~~ 151 (314)
..+..|.+||+.+++.............+.|+| +++.|+..+.+ ..|.++|+...+....... ...
T Consensus 160 ~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 160 EFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES 239 (396)
T ss_dssp HHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred eeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence 466789999999887665554455566789999 78877765543 3588888765432222221 234
Q ss_pred eeeEEeccCCCeEEEEcCC-----ceEEEEeCCCCCceeeeeecccceEEEEECC-CCCEEEEee---------------
Q 021319 152 VNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDP-MGRYFAVGS--------------- 210 (314)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~l~t~~--------------- 210 (314)
+..+.|+|+++.+++...+ +.+.+|+....+... +.... ... +.|+| +|++++.++
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEECC-SEE-EEEECSSSSEEEEEECCC----------CC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeCC-CCC-CCccCCCCceEEEecCCcceeecccccccc
Confidence 6778999999977666432 448999886654322 22111 223 88999 999888754
Q ss_pred -CCCeEEEeeCCCcEEEEEeeeccc-----------CeEEEEEccCCcEEEEecC-Cce--EEEEECCCCC
Q 021319 211 -ADSLVSLWDISEMLCVRTFTKLEW-----------PVRTISFSHTGDYIASASE-DLF--IDISNVHTGR 266 (314)
Q Consensus 211 -~dg~i~vwd~~~~~~~~~~~~~~~-----------~v~~~~~sp~~~~l~s~s~-d~~--v~v~~~~~~~ 266 (314)
.+..|.+||+.++... .+..+.. .+..++|+|+|+.|+.++. ++. +.+.+..++.
T Consensus 317 ~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 317 ENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp CCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred CCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 3468999999876542 3333333 2456789999998887765 444 4444554544
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.65 E-value=1.5e-12 Score=108.25 Aligned_cols=225 Identities=12% Similarity=0.103 Sum_probs=155.7
Q ss_pred CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee
Q 021319 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR 146 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 146 (314)
.-.....|+|.++.++++...++.|..||..++.. ........+..+++.+++++++. . +..|.++|..+.+.....
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 33467889987677888888899999999987765 33445566778999999995554 3 568999998766543221
Q ss_pred c-----cCcceeeEEeccCCCeEEEEcCC---------ceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEE-EeeC
Q 021319 147 K-----FGYEVNEIAWNMTGEMFFLTTGN---------GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFA-VGSA 211 (314)
Q Consensus 147 ~-----~~~~~~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~-t~~~ 211 (314)
. ....++.+++.++|..++..... ....+|.+........+..+....+.++|+|+++.|+ +.+.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 1 12346789999999977755321 2233444332222333334445578999999998764 5555
Q ss_pred CCeEEEeeC--CCcEE-----EEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEecc-CccceeEEc
Q 021319 212 DSLVSLWDI--SEMLC-----VRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR-AAMNSVEWN 283 (314)
Q Consensus 212 dg~i~vwd~--~~~~~-----~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~-~~i~~v~~~ 283 (314)
++.|..||+ .++.. ...+.........++++++|.+.++...++.|.+||..+|+.+..+... ..+++++|.
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 789999987 34432 1222223345788999999998888888889999999999998887654 578999998
Q ss_pred -CCCCeeEEEec
Q 021319 284 -PKYNLLAYAGD 294 (314)
Q Consensus 284 -~~~~~la~~~~ 294 (314)
|++..|..++.
T Consensus 250 g~d~~~L~vt~~ 261 (297)
T 3g4e_A 250 GKNYSEMYVTCA 261 (297)
T ss_dssp SGGGCEEEEEEB
T ss_pred CCCCCEEEEEcC
Confidence 88776644443
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=7.9e-13 Score=110.50 Aligned_cols=226 Identities=12% Similarity=0.120 Sum_probs=153.5
Q ss_pred ecCCCCEEEEEEcCCCCCEEEE-------EeCCCcEEEEeCCCCceeeeEE-----ecCceEEEEEccC-CCEEEEEeCC
Q 021319 63 RGHADSVDQLCWDPKHADLIAT-------ASGDKTVRLWDARSGKCSQQAE-----LSGENINITYKPD-GTHIAVGNRD 129 (314)
Q Consensus 63 ~~h~~~v~~l~~~~~~~~~l~s-------~~~D~~v~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~l~~~~~d 129 (314)
...-....+++|++++ .++++ +..++.|.+||..+++...... ....+..+++.++ +++++ +...
T Consensus 14 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~ 91 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMR 91 (314)
T ss_dssp ECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETT
T ss_pred hccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECC
Confidence 3344556789999764 67766 5778999999988877543322 2345677889999 65444 4445
Q ss_pred CcEEEEEccCCeEeee-ec-----cCcceeeEEeccCCCeEEEEcCC---------------ceEEEEeCCCCCceeeee
Q 021319 130 DELTILDVRKFKPIHR-RK-----FGYEVNEIAWNMTGEMFFLTTGN---------------GTVEVLTYPSLRPLDTVV 188 (314)
Q Consensus 130 ~~i~i~d~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~---------------g~~~~~~~~~~~~~~~~~ 188 (314)
..+.+||.. .+.... .. ....+..+++.+++..+++...+ +.+..++.. .+ ...+.
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~ 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-MIQVD 168 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-EEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-EEEec
Confidence 579999987 443322 11 11346789999999888777654 566666654 22 23333
Q ss_pred ecccceEEEEEC----CCCCEEEEe-eCCCeEEEeeCC-CcEE-----EEEeeecc-cCeEEEEEccCCcEEEEecCCce
Q 021319 189 AHTAGCYCIAID----PMGRYFAVG-SADSLVSLWDIS-EMLC-----VRTFTKLE-WPVRTISFSHTGDYIASASEDLF 256 (314)
Q Consensus 189 ~~~~~i~~i~~~----~~~~~l~t~-~~dg~i~vwd~~-~~~~-----~~~~~~~~-~~v~~~~~sp~~~~l~s~s~d~~ 256 (314)
.+...+..++++ |+++.+..+ ..++.|.+||.. ++.. ...+..+. ..+..++++++|.++++...++.
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 344557889999 999765544 567899999976 3432 22222222 45788999999999998888899
Q ss_pred EEEEECCCCCeEEEEecc-CccceeEEcCCCCeeEEEe
Q 021319 257 IDISNVHTGRTVHQIPCR-AAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 257 v~v~~~~~~~~~~~~~~~-~~i~~v~~~~~~~~la~~~ 293 (314)
|.+||..+++.+..+... ..+.+++|+|+++.|..++
T Consensus 249 i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence 999999877776666543 5789999999998554444
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.64 E-value=4e-12 Score=105.26 Aligned_cols=244 Identities=8% Similarity=0.002 Sum_probs=167.8
Q ss_pred EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEE--ecCceEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 021319 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE--LSGENINITYKPDGTHIAVGNRDDELTILDVR 138 (314)
Q Consensus 61 ~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 138 (314)
.+..+...+.++++++++ .+.++...++.|.+||.. +....... .......+++.+++...++...++.+..||..
T Consensus 9 ~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKG-KVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp ECCSSSCCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cCCCcCCCccceEECCCC-CEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 344555678999999875 566666668899999988 55432221 12456678899999887777768889999976
Q ss_pred CCeEeeeec-cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCcee-eeeecccceEEEEECCCCCEEEEeeCCCeEE
Q 021319 139 KFKPIHRRK-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLD-TVVAHTAGCYCIAIDPMGRYFAVGSADSLVS 216 (314)
Q Consensus 139 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~ 216 (314)
......... ....+..+++.+++..+++...++.+..++. ..+... ........+..+++++++++.++...++.|.
T Consensus 87 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 87 GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 322111111 2345778889999988888878889998887 332211 1122345689999999998888777778999
Q ss_pred EeeCCCcEEEEE-eeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec---cCccceeEEcCCCCeeEEE
Q 021319 217 LWDISEMLCVRT-FTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC---RAAMNSVEWNPKYNLLAYA 292 (314)
Q Consensus 217 vwd~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~---~~~i~~v~~~~~~~~la~~ 292 (314)
.||. +++.... .......+..++++|+|.+.++...++.|.+++. +++... +.. ...+.++++.|+++++++.
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEec
Confidence 9998 5544332 2223345789999999998888777889999999 766443 322 2468899999999877665
Q ss_pred ecCCcccccc-cceEEecc
Q 021319 293 GDDKNKYQAD-EGVFRIYG 310 (314)
Q Consensus 293 ~~d~~~~~~~-~~~~~~~~ 310 (314)
..+..++.++ .|+++.|.
T Consensus 243 ~~~~~i~~~d~~g~~~~~~ 261 (299)
T 2z2n_A 243 WGANKIGRLTSNNIIEEYP 261 (299)
T ss_dssp TTTTEEEEEETTTEEEEEE
T ss_pred cCCceEEEECCCCceEEEe
Confidence 4555554443 45665554
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.64 E-value=4.2e-13 Score=114.25 Aligned_cols=254 Identities=14% Similarity=0.082 Sum_probs=165.3
Q ss_pred EEECCCCCEEEEee----------CCCcEEEeecCCCCCCceeeEEeec--C---CCCEEEEEEcCCCCCEEEEEeC-CC
Q 021319 26 VAWNCTGTKLASGS----------VDQTARVWHIEPHGHGKVKDIELRG--H---ADSVDQLCWDPKHADLIATASG-DK 89 (314)
Q Consensus 26 v~~s~~g~~l~s~~----------~D~~v~iw~~~~~~~~~~~~~~~~~--h---~~~v~~l~~~~~~~~~l~s~~~-D~ 89 (314)
+.++|||+++..+. .++.|.+||..+.. .+..+.+.. + ......+.++|++..++++... ++
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~ 160 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP 160 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCC
Confidence 99999999877665 36789999987642 223333321 0 1234568899986544444333 68
Q ss_pred cEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccC-CeEeeeeccC-----cce-eeEEec-cCC
Q 021319 90 TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK-FKPIHRRKFG-----YEV-NEIAWN-MTG 161 (314)
Q Consensus 90 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~-----~~~-~~~~~~-~~~ 161 (314)
+|.++|..+++....+...+. ...+....+.+++.+.||++.+.++.. .+........ .++ ....|. +++
T Consensus 161 ~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 161 AVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred eEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 999999999998887765442 111222334455556667766666654 3322111100 011 123453 455
Q ss_pred CeEEEEcCCceEEEEeCCCCCc--eeeee----------ecccceEEEEECCCCCEEEEeeC----------CCeEEEee
Q 021319 162 EMFFLTTGNGTVEVLTYPSLRP--LDTVV----------AHTAGCYCIAIDPMGRYFAVGSA----------DSLVSLWD 219 (314)
Q Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~--~~~~~----------~~~~~i~~i~~~~~~~~l~t~~~----------dg~i~vwd 219 (314)
..++ .+.+|++++++...... ...+. -.......++++++++.++.... ...|.+.|
T Consensus 239 ~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD 317 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 317 (386)
T ss_dssp EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred cEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence 4444 55579999999854431 22221 01233446788999888776643 24799999
Q ss_pred CCCcEEEEEeeecccCeEEEEEccCCc-EEEEe-cCCceEEEEECCCCCeEEEEeccCccceeEEcCC
Q 021319 220 ISEMLCVRTFTKLEWPVRTISFSHTGD-YIASA-SEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPK 285 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~-s~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~ 285 (314)
+.+.+.++++... ..+..|+++||++ +|++. ..++.|.|+|..+++.+..++..+.-+.+.+++|
T Consensus 318 ~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 318 AKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp TTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred CCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 9999998887543 3678899999997 66665 5589999999999999999988888888888887
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.63 E-value=5e-13 Score=113.74 Aligned_cols=269 Identities=12% Similarity=0.052 Sum_probs=175.9
Q ss_pred EECCCCCEEEEeeC-----CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEe---------CCCcEE
Q 021319 27 AWNCTGTKLASGSV-----DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS---------GDKTVR 92 (314)
Q Consensus 27 ~~s~~g~~l~s~~~-----D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---------~D~~v~ 92 (314)
...|+++.+..... ++.|.+.|..+.. +. ..+..-..+ . +.++|++..+.++.. .++.|.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~---v~-~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGR---VI-GMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTE---EE-EEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCe---EE-EEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 45688988777654 6789999887532 22 233333334 4 999998765555442 467899
Q ss_pred EEeCCCCceeeeEEecC--------ceEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeeeeccCcceeeEEeccCCC
Q 021319 93 LWDARSGKCSQQAELSG--------ENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162 (314)
Q Consensus 93 iwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (314)
+||..+.+......... ....+.++|||++++++.. ++.+.++|+.+.+.+.++..+.. ...+.....
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~ 190 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPD 190 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETT
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCc
Confidence 99999999887776532 3456899999999998864 68899999999998887765321 222333345
Q ss_pred eEEEEcCCceEEEEeCCC-CCceeeeeec----ccce-EEEEE-CCCCCEEEEeeCCCeEEEeeCCCc--EEEEEeee--
Q 021319 163 MFFLTTGNGTVEVLTYPS-LRPLDTVVAH----TAGC-YCIAI-DPMGRYFAVGSADSLVSLWDISEM--LCVRTFTK-- 231 (314)
Q Consensus 163 ~~~~~~~~g~~~~~~~~~-~~~~~~~~~~----~~~i-~~i~~-~~~~~~l~t~~~dg~i~vwd~~~~--~~~~~~~~-- 231 (314)
.++..+.+|.+.++++.. .+.......+ ...+ ....| .++|++++.. .+|.|.+.|+... +.++.+..
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs-~~g~V~v~d~~~~~~~v~~~~~~~~ 269 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPT-YTGKIHQIDLSSGDAKFLPAVEALT 269 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEB-TTSEEEEEECTTSSCEECCCEESSC
T ss_pred eeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEe-CCCEEEEEECCCCcceeecceeccc
Confidence 556666777777777654 2321111000 1111 12345 4688766644 4799999999654 33333320
Q ss_pred --------cccCeEEEEEccCCcEEEEecC----------CceEEEEECCCCCeEEEEeccCccceeEEcCCCC-eeEEE
Q 021319 232 --------LEWPVRTISFSHTGDYIASASE----------DLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYN-LLAYA 292 (314)
Q Consensus 232 --------~~~~v~~~~~sp~~~~l~s~s~----------d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~-~la~~ 292 (314)
.......++++|+++.++.+.. ...|.+.|+.+++.+..++...++.+++++|+++ +|.++
T Consensus 270 ~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 270 EAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEE
T ss_pred cccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEE
Confidence 0112345778999988887642 2579999999999999998877899999999996 55554
Q ss_pred ecCCcccccccceEEeccc
Q 021319 293 GDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 293 ~~d~~~~~~~~~~~~~~~~ 311 (314)
.. .+|++-|+|.
T Consensus 350 n~-------~~~~VsViD~ 361 (386)
T 3sjl_D 350 ST-------GDKTLYIHDA 361 (386)
T ss_dssp ET-------TTTEEEEEET
T ss_pred cC-------CCCeEEEEEC
Confidence 43 1345556654
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=8.1e-12 Score=107.15 Aligned_cols=267 Identities=11% Similarity=-0.015 Sum_probs=171.4
Q ss_pred EECCCCCEEEEeeC--CC---cEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEe----------CCCcE
Q 021319 27 AWNCTGTKLASGSV--DQ---TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS----------GDKTV 91 (314)
Q Consensus 27 ~~s~~g~~l~s~~~--D~---~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~----------~D~~v 91 (314)
...|+++++..+.. .. +|.++|..+.. .. ..++.-..+ .+.++|++. .++.+. .++.|
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~---~~-~~i~~g~~p--~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v 99 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGS---IL-GHVNGGFLP--NPVAAHSGS-EFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCe---EE-EEecCCCCC--CeEECCCCC-EEEEEeccccccccCCCCCeE
Confidence 44578887666643 33 78899987532 22 233332333 889999865 444443 36789
Q ss_pred EEEeCCCCceeeeEEec--------CceEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeee-eccCcceeeEEeccC
Q 021319 92 RLWDARSGKCSQQAELS--------GENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHR-RKFGYEVNEIAWNMT 160 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~ 160 (314)
.+||..+.+........ .....+.++|||++|+++.. ++.|.++| .+.+.+.. +..+.. +.+.+.
T Consensus 100 ~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~ 175 (373)
T 2mad_H 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPG 175 (373)
T ss_pred EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeC
Confidence 99999888777665543 23446889999999998874 47899999 88887766 554322 333444
Q ss_pred C-CeEEEEcCCceEEEEeCCCCCceeeee-----ecccce-EEEEECCCCCEEEEeeCCCeEEEeeCCCc--EEEEEeee
Q 021319 161 G-EMFFLTTGNGTVEVLTYPSLRPLDTVV-----AHTAGC-YCIAIDPMGRYFAVGSADSLVSLWDISEM--LCVRTFTK 231 (314)
Q Consensus 161 ~-~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~i-~~i~~~~~~~~l~t~~~dg~i~vwd~~~~--~~~~~~~~ 231 (314)
+ ..++..+.+|.+.+++. ..+...... .....+ ....+.+++..++..+.++.+.+.|+... ..+..+..
T Consensus 176 ~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 176 APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred CCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeee
Confidence 4 45566677888888888 554432211 111111 22345555544443346788999998654 22333221
Q ss_pred c----------ccCeEEEEEccCCcEEEEecC----------CceEEEEECCCCCeEEEEeccCccceeEEcCCCC-eeE
Q 021319 232 L----------EWPVRTISFSHTGDYIASASE----------DLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYN-LLA 290 (314)
Q Consensus 232 ~----------~~~v~~~~~sp~~~~l~s~s~----------d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~-~la 290 (314)
. ......++++|+++.+..+.. ++.|.+.|..+++.+..++.......++|+|+++ .+.
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~ 334 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLY 334 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEE
Confidence 1 122344789999988777643 3579999999999999998777899999999999 555
Q ss_pred EEecCCcccccccceEEecccc
Q 021319 291 YAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 291 ~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+++.. ++++-||+.+
T Consensus 335 v~~~~-------~~~V~ViD~~ 349 (373)
T 2mad_H 335 ALSAG-------TEVLHIYDAG 349 (373)
T ss_pred EEcCC-------CCeEEEEECC
Confidence 55521 2566666653
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.62 E-value=6.1e-13 Score=124.52 Aligned_cols=260 Identities=11% Similarity=0.082 Sum_probs=163.6
Q ss_pred CCCCCEEEEeeCCCc---EEEeecCCC---CCCceeeE----EeecCCCCEEEEEEcCCCCCEEEEEeCC-----CcEEE
Q 021319 29 NCTGTKLASGSVDQT---ARVWHIEPH---GHGKVKDI----ELRGHADSVDQLCWDPKHADLIATASGD-----KTVRL 93 (314)
Q Consensus 29 s~~g~~l~s~~~D~~---v~iw~~~~~---~~~~~~~~----~~~~h~~~v~~l~~~~~~~~~l~s~~~D-----~~v~i 93 (314)
+|+|++++-...++. -.+|..+.. ........ ...+|...+..++|+|++. +|+.++.+ ..|++
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGR-LLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSS-EEEEEEEETTCSEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCC-EEEEEEcCCCCceEEEEE
Confidence 389998877665543 667866532 21111110 1123444678899999864 55554433 45999
Q ss_pred EeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCc--------------EEEEEccCCe----Eeeeecc-Ccceee
Q 021319 94 WDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDE--------------LTILDVRKFK----PIHRRKF-GYEVNE 154 (314)
Q Consensus 94 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~--------------i~i~d~~~~~----~~~~~~~-~~~~~~ 154 (314)
||+.+++.............++|+|| +.|+.+..++. |.+|++.+.+ .+..... ......
T Consensus 194 ~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 194 VGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp EETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred EECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99999886543211111235789999 98888876654 7888886553 2222111 123678
Q ss_pred EEeccCCCeEEEEcCC-----ceEEEEeCCCC--CceeeeeecccceEEEEECCCCCEEEEeeCC----CeEEEeeCCCc
Q 021319 155 IAWNMTGEMFFLTTGN-----GTVEVLTYPSL--RPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD----SLVSLWDISEM 223 (314)
Q Consensus 155 ~~~~~~~~~~~~~~~~-----g~~~~~~~~~~--~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~d----g~i~vwd~~~~ 223 (314)
+.|+|+|+.+++...+ ..+++++.... +....+..+....... ++|+|+.|+..+.+ +.|.+||+.++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 8999999988877643 47888887654 3134444444444444 34888888776653 45999999874
Q ss_pred --EEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECC-CCCeEEEEe--ccCccceeEEcCCCCeeEEE
Q 021319 224 --LCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVH-TGRTVHQIP--CRAAMNSVEWNPKYNLLAYA 292 (314)
Q Consensus 224 --~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~-~~~~~~~~~--~~~~i~~v~~~~~~~~la~~ 292 (314)
.....+..+...+..++++ ++.++++...|+..++|... +++.++.+. ..+.+..++|+|++..|+..
T Consensus 352 ~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~ 424 (741)
T 1yr2_A 352 TPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLS 424 (741)
T ss_dssp SCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEE
T ss_pred ccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEE
Confidence 3333344444456677887 67788899999987777654 466666654 24568899999998766543
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.60 E-value=3.1e-13 Score=126.55 Aligned_cols=239 Identities=12% Similarity=0.043 Sum_probs=151.7
Q ss_pred ccccEEEEEECCCCCEEEEeeCC-----CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc---
Q 021319 19 HKKKVHSVAWNCTGTKLASGSVD-----QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT--- 90 (314)
Q Consensus 19 H~~~V~~v~~s~~g~~l~s~~~D-----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~--- 90 (314)
|...+..++|||||++|+.++.+ ..|++||++++. .....+ +...+..++|+|+ . .|+.++.|..
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~---~~~~~~--~~~~~~~~~wspD-~-~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK---PLADEL--KWVKFSGLAWLGN-D-ALLYSRFAEPKEG 233 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC---EEEEEE--EEEESCCCEESTT-S-EEEEEECCCC---
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC---CCCccC--CCceeccEEEECC-C-EEEEEEecCcccc
Confidence 44578899999999999887654 469999997643 221111 1112356899997 4 5556666544
Q ss_pred -----------EEEEeCCCCcee--eeEEecC---ceEEEEEccCCCEEEEEeCCC-----cEEEEEccCCeE--eeeec
Q 021319 91 -----------VRLWDARSGKCS--QQAELSG---ENINITYKPDGTHIAVGNRDD-----ELTILDVRKFKP--IHRRK 147 (314)
Q Consensus 91 -----------v~iwd~~~~~~~--~~~~~~~---~~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~--~~~~~ 147 (314)
|.+|++.++... ....... ....+.|+|||++|+....++ .+.++|+..... .....
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 313 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI 313 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec
Confidence 889998776532 1122211 256788999999998777543 799999876521 12221
Q ss_pred -cCcceeeEEeccCCCeEEEEcC----CceEEEEeCCCC-Cceeee-eecccceEEEEECCCCCEEEEeeCCCeEEEeeC
Q 021319 148 -FGYEVNEIAWNMTGEMFFLTTG----NGTVEVLTYPSL-RPLDTV-VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (314)
Q Consensus 148 -~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~-~~~~~~-~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~ 220 (314)
........ +.++++.+++.+. ++.+.+++.... .....+ ..+...+..++++ ++.++++...|+..++|.+
T Consensus 314 ~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 314 PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 11122222 3478887777654 456888887653 122233 3344446677777 5677888888998777755
Q ss_pred C-CcEEEEEeeec-ccCeEEEEEccCCcEEE----EecCCceEEEEECCCCC
Q 021319 221 S-EMLCVRTFTKL-EWPVRTISFSHTGDYIA----SASEDLFIDISNVHTGR 266 (314)
Q Consensus 221 ~-~~~~~~~~~~~-~~~v~~~~~sp~~~~l~----s~s~d~~v~v~~~~~~~ 266 (314)
. ++..++.+... ...+..++++|+++.|+ +....+.+++||+.+++
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 4 45555555432 45688899999988666 33345889999998875
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.56 E-value=3.6e-11 Score=101.31 Aligned_cols=220 Identities=11% Similarity=0.060 Sum_probs=150.0
Q ss_pred EEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeecc
Q 021319 69 VDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKF 148 (314)
Q Consensus 69 v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 148 (314)
.....|+|+++.++++...++.|..||..+++.. .......+..+.+.+++++++.. . ..|.+||..+.+.......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECS
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeC
Confidence 4567899876677788878899999999877543 33344567788899999877654 3 4599999876554322111
Q ss_pred -----CcceeeEEeccCCCeEEEEcC------CceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEe-eCCCeEE
Q 021319 149 -----GYEVNEIAWNMTGEMFFLTTG------NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVG-SADSLVS 216 (314)
Q Consensus 149 -----~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~-~~dg~i~ 216 (314)
...+..+.+++++..++.... .+.+..++ .. .+..+..+......++|+|+++.++.+ +.++.|.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG-KVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT-EEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC-cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 134778899999987765542 35566665 22 222333333457889999999876544 4568999
Q ss_pred EeeCC--Cc-E-----EEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEecc-CccceeEEc-CCC
Q 021319 217 LWDIS--EM-L-----CVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCR-AAMNSVEWN-PKY 286 (314)
Q Consensus 217 vwd~~--~~-~-----~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~-~~i~~v~~~-~~~ 286 (314)
+||+. ++ . ....+.........++++++|.+.++...++.|.+|+. +++.+..+... ..+++++|. |++
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTS
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCC
Confidence 99985 44 2 12222222345678999999998887777788999998 67777766543 368999998 887
Q ss_pred CeeEEEecC
Q 021319 287 NLLAYAGDD 295 (314)
Q Consensus 287 ~~la~~~~d 295 (314)
..|..++..
T Consensus 284 ~~L~vt~~~ 292 (326)
T 2ghs_A 284 SRLLVTSAR 292 (326)
T ss_dssp CEEEEEEBC
T ss_pred CEEEEEecC
Confidence 766544443
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.56 E-value=1.2e-11 Score=107.38 Aligned_cols=232 Identities=9% Similarity=0.013 Sum_probs=156.8
Q ss_pred CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCC--cEEEEEccCCeEee
Q 021319 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDD--ELTILDVRKFKPIH 144 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~ 144 (314)
.....++|++++ +++++...++.|++||..++............. ++++++++.|+++..++ .|.+++........
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 356789999875 577777778999999998877655443333333 88999999999888766 68888876543222
Q ss_pred ee----c-cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeee-----eecccc-eE-EEEECCC-CCEEEEeeC
Q 021319 145 RR----K-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTV-----VAHTAG-CY-CIAIDPM-GRYFAVGSA 211 (314)
Q Consensus 145 ~~----~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~-i~-~i~~~~~-~~~l~t~~~ 211 (314)
.. . ....+..++++|.+..++++..++.+..|+...... ..+ .++... +. .++|+|+ +.++++-..
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 22 1 334567889999555555577788899998765432 122 111111 23 9999995 666666667
Q ss_pred CCeEEEeeCCCcEEEEEeeecc---------------cCeEEEEEccCCcEEEEec-CCceEEEEECCCCCeEEEEec--
Q 021319 212 DSLVSLWDISEMLCVRTFTKLE---------------WPVRTISFSHTGDYIASAS-EDLFIDISNVHTGRTVHQIPC-- 273 (314)
Q Consensus 212 dg~i~vwd~~~~~~~~~~~~~~---------------~~v~~~~~sp~~~~l~s~s-~d~~v~v~~~~~~~~~~~~~~-- 273 (314)
++.|+.|+.... +..+.+.. .....++++|+|+++++-+ .+..|+.|+..+++.......
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~ 365 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVD 365 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCC
Confidence 789999997644 22332221 2368899999999888888 899999999877765433322
Q ss_pred -------------cCccceeEEcCCCCeeEEEecCCcccccccceEEeccc
Q 021319 274 -------------RAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGF 311 (314)
Q Consensus 274 -------------~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~ 311 (314)
-.....|++.|++.++++-..+ +.+|.+.+
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n--------~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG--------KAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT--------CEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC--------CeEEEEEe
Confidence 1246789999997766654433 45665554
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.55 E-value=2.5e-11 Score=105.50 Aligned_cols=232 Identities=13% Similarity=0.100 Sum_probs=157.0
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCC--cEEEEeCCC
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK--TVRLWDARS 98 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~--~v~iwd~~~ 98 (314)
.....|+|+++++++++...++.|++|+.+.. .+... ... ..... ++|++++ +.|+.+..++ .|.+++...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g---~~~~~-~~~-~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN---KVTTV-HPG-FKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT---EEEEE-EET-CCBCB-CEECTTS-SEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC---EEEEe-ecc-CCCCc-eeEecCC-CcEEEEecCCCceEEEEEcCC
Confidence 46889999999998888888899999998642 22221 222 22233 8899875 5666777655 788888876
Q ss_pred CceeeeE----E-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee----eccC--ccee-eEEeccC-CCeEE
Q 021319 99 GKCSQQA----E-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR----RKFG--YEVN-EIAWNMT-GEMFF 165 (314)
Q Consensus 99 ~~~~~~~----~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~--~~~~-~~~~~~~-~~~~~ 165 (314)
+...... . .......++++|++..|+++..++.|..||+........ .... .... .++++|. +.+++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 5543322 1 123345688899656666677788899999876542211 1111 1112 8999995 66666
Q ss_pred EEcCCceEEEEeCCCCCceeeeeecc---------------cceEEEEECCCCCEEEEee-CCCeEEEeeCCCcEEEEEe
Q 021319 166 LTTGNGTVEVLTYPSLRPLDTVVAHT---------------AGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 166 ~~~~~g~~~~~~~~~~~~~~~~~~~~---------------~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~ 229 (314)
+-..++.|..++.... ...+.++. ..+..++++++|+++++-. .++.|+.||+.++.. .++
T Consensus 284 ~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~ 360 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STV 360 (409)
T ss_dssp EETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEE
T ss_pred EeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEE
Confidence 6677889998886543 33333332 3478999999999777777 788999999877764 333
Q ss_pred eec---------------ccCeEEEEEccCCcEEEEecCCceEEEEEC
Q 021319 230 TKL---------------EWPVRTISFSHTGDYIASASEDLFIDISNV 262 (314)
Q Consensus 230 ~~~---------------~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~ 262 (314)
.+. -.....++++|++.++++-..+..|+.+++
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 332 124788999999988888888888877654
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=3.2e-11 Score=100.60 Aligned_cols=227 Identities=12% Similarity=0.085 Sum_probs=151.8
Q ss_pred eecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCe
Q 021319 62 LRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFK 141 (314)
Q Consensus 62 ~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 141 (314)
+...........|+|++..++++...++.|..|+. ++..............+++.++|+++++...++.|..++.. .+
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 34455567788999986557888888999999998 45533222334456678999999977766666789999875 32
Q ss_pred Eeee--ecc---CcceeeEEeccCCCeEEE----EcC-------------CceEEEEeCCCCCceeeeeecccceEEEEE
Q 021319 142 PIHR--RKF---GYEVNEIAWNMTGEMFFL----TTG-------------NGTVEVLTYPSLRPLDTVVAHTAGCYCIAI 199 (314)
Q Consensus 142 ~~~~--~~~---~~~~~~~~~~~~~~~~~~----~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 199 (314)
...- ... ...++.+++.++|..+++ +.. .+.+..++....+.. .+. ....++.++|
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~-~~~-~~~~p~gl~~ 195 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ-RMA-DLDHPNGLAF 195 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE-EEE-EESSEEEEEE
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE-EEe-cCCCCcceEE
Confidence 2111 111 123567899999988775 221 245666665444332 222 3455788999
Q ss_pred CCCCCEEEEeeCC------CeEEEeeCCCcEEE--EEee-ecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEE
Q 021319 200 DPMGRYFAVGSAD------SLVSLWDISEMLCV--RTFT-KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQ 270 (314)
Q Consensus 200 ~~~~~~l~t~~~d------g~i~vwd~~~~~~~--~~~~-~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~ 270 (314)
+|+++.|+.+... +.|.+||+...... ..+. ........++++++|++.++. .++ |.+|+. .++.+..
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~g-v~~~~~-~g~~~~~ 272 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTG-VCVFDS-DGQLLGH 272 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SSE-EEEECT-TSCEEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CCc-EEEECC-CCCEEEE
Confidence 9999988777665 68999998754311 1111 112334568999999955544 554 999998 6777877
Q ss_pred EeccCccceeEEcCCCCeeEEEecC
Q 021319 271 IPCRAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 271 ~~~~~~i~~v~~~~~~~~la~~~~d 295 (314)
+.....+.+++|.|+++.|..++.+
T Consensus 273 ~~~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 273 IPTPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EECSSCCCEEEECTTSCEEEEEETT
T ss_pred EECCCceeEEEEeCCCCEEEEEcCC
Confidence 7665578999999998877766654
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.54 E-value=7.8e-12 Score=108.23 Aligned_cols=267 Identities=10% Similarity=0.022 Sum_probs=172.4
Q ss_pred CCCCEEEEeeC-C----CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEe---------CCCcEEEEe
Q 021319 30 CTGTKLASGSV-D----QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS---------GDKTVRLWD 95 (314)
Q Consensus 30 ~~g~~l~s~~~-D----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---------~D~~v~iwd 95 (314)
++++.+..+.. + +.|.+.|..+.. .+. ++..-..+ .+.++|++..+.++.. .++.|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~--vv~--~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGR--ILG--MTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTE--EEE--EEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCE--EEE--EEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 45665444433 3 689999987632 222 23222334 7899999766655542 467999999
Q ss_pred CCCCceeeeEEec--------CceEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeeeeccCcceeeEEeccC-CCeE
Q 021319 96 ARSGKCSQQAELS--------GENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRRKFGYEVNEIAWNMT-GEMF 164 (314)
Q Consensus 96 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 164 (314)
..+++......+. .....+.++|||++++++.. ++.|.++|+.+.+.+.++..+.. ....|. ...+
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~ 232 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVF 232 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEE
Confidence 9999988777653 23346889999999999874 57899999999998877765432 122222 2445
Q ss_pred EEEcCCceEEEEeCCCCCceee----eeecccc-eEEEEECCCCCEEEEeeCCCeEEEeeCCCcEE--EEEeee------
Q 021319 165 FLTTGNGTVEVLTYPSLRPLDT----VVAHTAG-CYCIAIDPMGRYFAVGSADSLVSLWDISEMLC--VRTFTK------ 231 (314)
Q Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~-i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~--~~~~~~------ 231 (314)
+..+.+|.+.+.+....+.... +...... ...+.+++++..++..+..+.+.+.|+..... +..+..
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 5556667666666633332211 1111111 12346788888776667788999999865432 121110
Q ss_pred ----cccCeEEEEEccCCcEEEEecC----------CceEEEEECCCCCeEEEEeccCccceeEEcCCCC-eeEEEecCC
Q 021319 232 ----LEWPVRTISFSHTGDYIASASE----------DLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYN-LLAYAGDDK 296 (314)
Q Consensus 232 ----~~~~v~~~~~sp~~~~l~s~s~----------d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~-~la~~~~d~ 296 (314)
.......++++|+++.++.+.. ++.|.+.|..+.+.+..++.......++|+|+++ .++++...
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~- 391 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAG- 391 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETT-
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCC-
Confidence 0111223789999887766532 4579999999999999998777799999999998 77766632
Q ss_pred cccccccceEEecccc
Q 021319 297 NKYQADEGVFRIYGFE 312 (314)
Q Consensus 297 ~~~~~~~~~~~~~~~~ 312 (314)
++++-|+|.+
T Consensus 392 ------s~~VsVID~~ 401 (426)
T 3c75_H 392 ------TQTLHIYDAA 401 (426)
T ss_dssp ------TTEEEEEETT
T ss_pred ------CCeEEEEECC
Confidence 2566666653
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.53 E-value=1.3e-10 Score=99.68 Aligned_cols=238 Identities=13% Similarity=0.013 Sum_probs=155.2
Q ss_pred EEEECCCCCEEEEee----------CCCcEEEeecCCCCCCceeeEEee--cC---CCCEEEEEEcCCCCCEEEEEe-C-
Q 021319 25 SVAWNCTGTKLASGS----------VDQTARVWHIEPHGHGKVKDIELR--GH---ADSVDQLCWDPKHADLIATAS-G- 87 (314)
Q Consensus 25 ~v~~s~~g~~l~s~~----------~D~~v~iw~~~~~~~~~~~~~~~~--~h---~~~v~~l~~~~~~~~~l~s~~-~- 87 (314)
.+++||||+++..+. .++.|.+||..+.. ....+.+. .+ ......+.++|++. +|+.+. .
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~~~~i~~~~~~~~~~g~~p~~~~~spDG~-~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--PIADIELPDAPRFDVGPYSWMNANTPNNA-DLLFFQFAA 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--EEEEEECCCccccccCCCccceEECCCCC-EEEEEecCC
Confidence 889999999988875 36789999986432 22222222 00 12345789999865 555554 3
Q ss_pred CCcEEEEeCCCCceeee-EEecCceEEEEEccCC-CEEEEEeCCCcEEEEEccCCeEeeeec-----cCc-c-eeeEEec
Q 021319 88 DKTVRLWDARSGKCSQQ-AELSGENINITYKPDG-THIAVGNRDDELTILDVRKFKPIHRRK-----FGY-E-VNEIAWN 158 (314)
Q Consensus 88 D~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~-~-~~~~~~~ 158 (314)
+.+|.++| .+++.... ...... +.+.|++ ..+++.+.|+.+.++|. +.+...... ... + .....+.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 58899999 99887766 544332 3344554 34455667888999998 665543221 110 1 1122344
Q ss_pred cCCCeEEEEcCCceEEEEeCCCCCc--eeeeee----------cccceEEEEECCCCCEEEEeeC----------CCeEE
Q 021319 159 MTGEMFFLTTGNGTVEVLTYPSLRP--LDTVVA----------HTAGCYCIAIDPMGRYFAVGSA----------DSLVS 216 (314)
Q Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~----------~~~~i~~i~~~~~~~~l~t~~~----------dg~i~ 216 (314)
+++..++.....+.+.+++...... +..+.. .......++++|+++.+.++.. .+.|.
T Consensus 222 ~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 222 NKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred ecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 5555545555677888888754321 111110 1223445789999988777543 35799
Q ss_pred EeeCCCcEEEEEeeecccCeEEEEEccCCc-EEEEec-CCceEEEEECCCCCeEEEE
Q 021319 217 LWDISEMLCVRTFTKLEWPVRTISFSHTGD-YIASAS-EDLFIDISNVHTGRTVHQI 271 (314)
Q Consensus 217 vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~s-~d~~v~v~~~~~~~~~~~~ 271 (314)
++|+.+++.++++... .....++|+|||+ +++++. .++.|.|+|..+++.+..+
T Consensus 302 VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 302 SVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 9999999998888533 3578899999999 777777 4899999999999988773
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=7.4e-12 Score=106.32 Aligned_cols=256 Identities=11% Similarity=0.023 Sum_probs=159.8
Q ss_pred ccEEEEEECCCCCEEEEee--CCCcEEEeecCCCCCCceeeE-----EeecCCCCEEEEEEcCCCCCEEEEEeC-----C
Q 021319 21 KKVHSVAWNCTGTKLASGS--VDQTARVWHIEPHGHGKVKDI-----ELRGHADSVDQLCWDPKHADLIATASG-----D 88 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~--~D~~v~iw~~~~~~~~~~~~~-----~~~~h~~~v~~l~~~~~~~~~l~s~~~-----D 88 (314)
.....|+++++|+.+++.. .++.++||.++. +..... ...+|...+..+++++++ .+.++-.. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~---g~~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ---DGLIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET---TEEEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC---CCeecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCC
Confidence 6899999999999999864 234477787751 222211 112456789999999874 45544333 5
Q ss_pred CcEEEEeCCCCceeeeEEecC-------ceEEEEEccCCCEEEEE-e---CCCcEEEEEccCCeEeeeecc--CcceeeE
Q 021319 89 KTVRLWDARSGKCSQQAELSG-------ENINITYKPDGTHIAVG-N---RDDELTILDVRKFKPIHRRKF--GYEVNEI 155 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~-~---~d~~i~i~d~~~~~~~~~~~~--~~~~~~~ 155 (314)
..|.+||+.+++......+.. ....+++.+++..++++ . .++.|.+||+.+.+....... .......
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 789999999888666555421 23467888765555444 4 578899999987654433221 1000012
Q ss_pred EeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCC-eEEEeeCC---CcE-------
Q 021319 156 AWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADS-LVSLWDIS---EML------- 224 (314)
Q Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg-~i~vwd~~---~~~------- 224 (314)
.+.+++..+.....++.+..| ...+..++++|+++.|+.+...+ .+..++.. .+.
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~--------------~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRP--------------HLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp CCEETTEECBEECTTSCEECC--------------CCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred ceeECCEEEEeccCCCceece--------------ecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 233344444444444443222 12467899999999888887766 44444421 100
Q ss_pred -EEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec--cCccceeEEcCCCCeeEEEecC
Q 021319 225 -CVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC--RAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 225 -~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~--~~~i~~v~~~~~~~~la~~~~d 295 (314)
.+.. .+.......++++++|.++++...++.|.+||..+++....... .....+++|.|++.++++.+..
T Consensus 239 ~~~~~-~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 239 SKIER-YSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp TTCEE-EEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred cceEe-cccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 0011 12223456799999999999999999999999866654333322 2347899999999888777654
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=4.6e-11 Score=99.27 Aligned_cols=226 Identities=11% Similarity=0.058 Sum_probs=149.4
Q ss_pred cccccEEEEEECCCC-CEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeC
Q 021319 18 GHKKKVHSVAWNCTG-TKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDA 96 (314)
Q Consensus 18 gH~~~V~~v~~s~~g-~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~ 96 (314)
.+..-.....|+|++ .++++...++.|..|+.+... ... ......+.++++++++. ++++ . +..|.+||.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---~~~---~~~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~ 80 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---VQR---VTMDAPVSSVALRQSGG-YVAT-I-GTKFCALNW 80 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---EEE---EECSSCEEEEEEBTTSS-EEEE-E-TTEEEEEET
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---EEE---EeCCCceEEEEECCCCC-EEEE-E-CCeEEEEEC
Confidence 344556788999965 456666678999999986532 221 23456789999998764 5554 3 578999999
Q ss_pred CCCceeeeEEec-----CceEEEEEccCCCEEEEEeCC---------CcEEEEEccC-CeEeeeeccCcceeeEEeccCC
Q 021319 97 RSGKCSQQAELS-----GENINITYKPDGTHIAVGNRD---------DELTILDVRK-FKPIHRRKFGYEVNEIAWNMTG 161 (314)
Q Consensus 97 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~ 161 (314)
.+++........ .....+++.|+|++++..... ....+|.+.. .+...........+.++|+|++
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDH 160 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTS
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCC
Confidence 887754433321 123458899999966654321 2234444332 2221112222346789999999
Q ss_pred CeEEE-EcCCceEEEEeCC--CCCc-----eeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc
Q 021319 162 EMFFL-TTGNGTVEVLTYP--SLRP-----LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE 233 (314)
Q Consensus 162 ~~~~~-~~~~g~~~~~~~~--~~~~-----~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~ 233 (314)
+.+++ ....+.+..|++. .... +..+..+...+..++++++|++.++...++.|..||..+++.+..+....
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 86654 4567889999863 3221 11122234567899999999988887778899999998888888877666
Q ss_pred cCeEEEEEc-cCCcEEEEec
Q 021319 234 WPVRTISFS-HTGDYIASAS 252 (314)
Q Consensus 234 ~~v~~~~~s-p~~~~l~s~s 252 (314)
..+.+++|. |+++.|...+
T Consensus 241 ~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 241 DKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp SBEEEEEEESGGGCEEEEEE
T ss_pred CCceEEEEeCCCCCEEEEEc
Confidence 678999998 8887665443
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.51 E-value=4e-10 Score=93.13 Aligned_cols=243 Identities=9% Similarity=0.010 Sum_probs=163.7
Q ss_pred EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEec---CceEEEEEccCCCEEEEEeCCCcEEEEEc
Q 021319 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS---GENINITYKPDGTHIAVGNRDDELTILDV 137 (314)
Q Consensus 61 ~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 137 (314)
.+......+.++++.+++ .+.++...++.|.+||.. ++... .... .....+++.++++..++...++.|..+|.
T Consensus 14 ~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 14 NLSIPDSGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp ECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred ecCCCCCCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 344445678899998874 577766678999999987 55433 2221 34667888999987777766788999998
Q ss_pred cCCeEee-eec-cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCcee-eeeecccceEEEEECCCCCEEEEeeCCCe
Q 021319 138 RKFKPIH-RRK-FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLD-TVVAHTAGCYCIAIDPMGRYFAVGSADSL 214 (314)
Q Consensus 138 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~l~t~~~dg~ 214 (314)
. .+... ... ....+..+++.+++..+++...++.+..++.. .+... .+......+..+++++++++.++...++.
T Consensus 91 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 91 K-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred C-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 7 33321 111 23457788889999888887778889888875 33221 12223456899999999997777666788
Q ss_pred EEEeeCCCcEEEE-EeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEE-Ee-ccCccceeEEcCCCCeeEE
Q 021319 215 VSLWDISEMLCVR-TFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQ-IP-CRAAMNSVEWNPKYNLLAY 291 (314)
Q Consensus 215 i~vwd~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~-~~-~~~~i~~v~~~~~~~~la~ 291 (314)
|..+|. ++.... ........+..++++|+|.+.++....+.|.+++. +++.... .+ ....+.++++.|++++.++
T Consensus 169 i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~ 246 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFT 246 (300)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEe
Confidence 999998 444332 12222345789999999998887777888999998 5554432 22 1345789999999987665
Q ss_pred EecCCcccccc-cceEEecc
Q 021319 292 AGDDKNKYQAD-EGVFRIYG 310 (314)
Q Consensus 292 ~~~d~~~~~~~-~~~~~~~~ 310 (314)
...+..++.++ .|+++.|.
T Consensus 247 ~~~~~~i~~~~~~g~~~~~~ 266 (300)
T 2qc5_A 247 EWGANQIGRITNDNTIQEYQ 266 (300)
T ss_dssp ETTTTEEEEECTTSCEEEEE
T ss_pred ccCCCeEEEECCCCcEEEEE
Confidence 54444443322 34554443
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.51 E-value=1.5e-12 Score=111.28 Aligned_cols=169 Identities=11% Similarity=0.082 Sum_probs=130.8
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEEccCCe-----------EeeeeccCcceeeEEeccCCCeEEEEcCCceEEEEeCC
Q 021319 111 NINITYKPDGTHIAVGNRDDELTILDVRKFK-----------PIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYP 179 (314)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 179 (314)
...+++++...++++|+.+ .+.+|++...+ +........ +..++| +++.++++ .++.+++|+..
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 4458888999999999887 56669865332 223334555 899999 88888888 88999999988
Q ss_pred CCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEE
Q 021319 180 SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 259 (314)
Q Consensus 180 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v 259 (314)
..........|..++..+.+.+. .+|++..||.+.+||+.++...+ +...|.+++|||+| ++.|..||.+++
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred hhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 77766666677778888777654 38889999999999998776543 34579999999999 678999999999
Q ss_pred EECCCCCe--EEEEe----------ccCccceeEEcCCCCeeEEE
Q 021319 260 SNVHTGRT--VHQIP----------CRAAMNSVEWNPKYNLLAYA 292 (314)
Q Consensus 260 ~~~~~~~~--~~~~~----------~~~~i~~v~~~~~~~~la~~ 292 (314)
|+...+.. ...++ +...|.+|.|.+++.+|++=
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 98877664 45552 34579999999999888653
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.47 E-value=2.9e-11 Score=104.65 Aligned_cols=254 Identities=12% Similarity=0.052 Sum_probs=160.1
Q ss_pred EEEECCCCCEEEEee----------CCCcEEEeecCCCCCCceeeEEeecC-----CCCEEEEEEcCCCCCEEEEEe-C-
Q 021319 25 SVAWNCTGTKLASGS----------VDQTARVWHIEPHGHGKVKDIELRGH-----ADSVDQLCWDPKHADLIATAS-G- 87 (314)
Q Consensus 25 ~v~~s~~g~~l~s~~----------~D~~v~iw~~~~~~~~~~~~~~~~~h-----~~~v~~l~~~~~~~~~l~s~~-~- 87 (314)
.+.++|||+++..+. .++.|.++|..+.. .+..+.+.+. ......+.++|++. +++.+. .
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--vv~~I~v~g~~r~~~g~~P~~~~~spDGk-~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--PIADIELPDAPRFLVGTYQWMNALTPDNK-NLLFYQFSP 198 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETTCCCCCBSCCGGGSEECTTSS-EEEEEECSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--EEEEEECCCccccccCCCcceEEEcCCCC-EEEEEecCC
Confidence 789999999877765 36789999987642 2233333211 12345678899865 555544 3
Q ss_pred CCcEEEEeCCCCceeeeEEecCceEEEEEccCC-CEEEEEeCCCcEEEEEccCCeEeee----eccCc--ceeeEEeccC
Q 021319 88 DKTVRLWDARSGKCSQQAELSGENINITYKPDG-THIAVGNRDDELTILDVRKFKPIHR----RKFGY--EVNEIAWNMT 160 (314)
Q Consensus 88 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~--~~~~~~~~~~ 160 (314)
+++|.+.|..+++....+...+. ....|++ ..+++.+.|+.+.+.+....+.... +.... ......+.++
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~d 275 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLR 275 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTT
T ss_pred CCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCC
Confidence 68999999999988877665432 1122222 3344445566666556533332211 11111 1123456788
Q ss_pred CCeEEEEcCCceEEEEeCCCCCc--eeeee----------ecccceEEEEECCCCCEEEEeeC----------CCeEEEe
Q 021319 161 GEMFFLTTGNGTVEVLTYPSLRP--LDTVV----------AHTAGCYCIAIDPMGRYFAVGSA----------DSLVSLW 218 (314)
Q Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~--~~~~~----------~~~~~i~~i~~~~~~~~l~t~~~----------dg~i~vw 218 (314)
+..+++....+.+.+.+...... +..+. ........++++|+++.+++... .+.|.+.
T Consensus 276 g~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVI 355 (426)
T 3c75_H 276 SGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVL 355 (426)
T ss_dssp TCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEE
Confidence 88877777888999988754321 11110 01122234789999887666542 3579999
Q ss_pred eCCCcEEEEEeeecccCeEEEEEccCCc-EEEEec-CCceEEEEECCCCCeEEEEeccCccceeEEcCC
Q 021319 219 DISEMLCVRTFTKLEWPVRTISFSHTGD-YIASAS-EDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPK 285 (314)
Q Consensus 219 d~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~s-~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~ 285 (314)
|+.+.+.++++.... ....++|+||++ +++++. .++.|.|+|+.+++.+..+..-+.-..+..+||
T Consensus 356 D~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~ 423 (426)
T 3c75_H 356 NAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD 423 (426)
T ss_dssp ETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred ECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence 999999998886433 478899999999 888887 589999999999999988732222222444443
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=1.6e-10 Score=96.31 Aligned_cols=234 Identities=12% Similarity=0.096 Sum_probs=152.8
Q ss_pred cceeeecccccEEEEEECCCCC-EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCc
Q 021319 12 HSREYTGHKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKT 90 (314)
Q Consensus 12 ~~~~~~gH~~~V~~v~~s~~g~-~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~ 90 (314)
..+.+..+........|+|+|+ ++++...++.|..|+... ... .+..+...+..+++++++ +++++...++.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----~~~--~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~ 108 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----TVD--VLLDATAFTNGNAVDAQQ-RLVHCEHGRRA 108 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS----CEE--EEEESCSCEEEEEECTTS-CEEEEETTTTE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC----CEE--EEeCCCCccceeeECCCC-CEEEEECCCCE
Confidence 3444555666788999999998 567777789999997631 222 334456778999999875 57666666789
Q ss_pred EEEEeCCCCceeeeEEe-cC----ceEEEEEccCCCEEEE----EeC-------------CCcEEEEEccCCeEeeeecc
Q 021319 91 VRLWDARSGKCSQQAEL-SG----ENINITYKPDGTHIAV----GNR-------------DDELTILDVRKFKPIHRRKF 148 (314)
Q Consensus 91 v~iwd~~~~~~~~~~~~-~~----~~~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~ 148 (314)
|.+||.. ++....... .. ....+.+.++|++.++ |.. .+.|..+|..+.+..... .
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~ 186 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D 186 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c
Confidence 9999986 554322211 11 1235888999998775 332 245777777544332222 2
Q ss_pred CcceeeEEeccCCCeEEEEcCC------ceEEEEeCCCCCceee---e-eecccceEEEEECCCCCEEEEeeCCCeEEEe
Q 021319 149 GYEVNEIAWNMTGEMFFLTTGN------GTVEVLTYPSLRPLDT---V-VAHTAGCYCIAIDPMGRYFAVGSADSLVSLW 218 (314)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~---~-~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vw 218 (314)
......++|+|+++.++++... +.+..|+..... +.. + ......+..++++++|++.+ ++.+ .|.+|
T Consensus 187 ~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~ 263 (305)
T 3dr2_A 187 LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVF 263 (305)
T ss_dssp ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEE-CCSS-EEEEE
T ss_pred CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEE-ecCC-cEEEE
Confidence 2345778999999977766554 688888865432 111 1 11223456789999999555 4444 49999
Q ss_pred eCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEE
Q 021319 219 DISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 259 (314)
Q Consensus 219 d~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v 259 (314)
|. +++.+..+.... .+.+++|+|+++.|..++.++..++
T Consensus 264 ~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 264 DS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp CT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 98 466666665444 5888999999988887777754443
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.45 E-value=2.8e-11 Score=112.43 Aligned_cols=239 Identities=13% Similarity=0.118 Sum_probs=148.2
Q ss_pred cccccEEEEEECCCCCEEEE-----eeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCC---
Q 021319 18 GHKKKVHSVAWNCTGTKLAS-----GSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK--- 89 (314)
Q Consensus 18 gH~~~V~~v~~s~~g~~l~s-----~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~--- 89 (314)
+|...+..++|||||++||- |+.+..|++||++++. .....+.+. ....++|+ ++ +.|+.++.|.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~---~~~~~~~~~--k~~~~~Ws-Dg-~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ---PLETPLKDV--KFSGISWL-GN-EGFFYSSYDKPDG 198 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS---EEEEEEEEE--ESCCCEEE-TT-TEEEEEESSCCC-
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC---CCccccCCc--eeccEEEe-CC-CEEEEEEecCccc
Confidence 45667999999999998883 3344689999998643 222222221 12456898 65 5566666664
Q ss_pred ----------cEEEEeCCCCceee--eEEecC----ceEEEEEccCCCEEEEEeC----CCcEEEEEccCCe-Eeeeecc
Q 021319 90 ----------TVRLWDARSGKCSQ--QAELSG----ENINITYKPDGTHIAVGNR----DDELTILDVRKFK-PIHRRKF 148 (314)
Q Consensus 90 ----------~v~iwd~~~~~~~~--~~~~~~----~~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~-~~~~~~~ 148 (314)
.|.+|++.++.... ...... ....+.++|||++|+.... ...+.++|+.... .......
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 39999987765321 111111 2467889999999876543 2478899986652 1122211
Q ss_pred Cc-ceeeEEeccCCCeEEEEc-C---CceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCCC---eEEEe
Q 021319 149 GY-EVNEIAWNMTGEMFFLTT-G---NGTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSADS---LVSLW 218 (314)
Q Consensus 149 ~~-~~~~~~~~~~~~~~~~~~-~---~g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg---~i~vw 218 (314)
.. ..... +++++..+++.+ . .+.+..+++..... ...+..|...+. .|+++++.|+....++ .|.+|
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 11 12222 556666555443 3 36788888765443 244555665555 8889998877665544 68999
Q ss_pred eCCCcEEEEEee-ecccCeEEEEEccCCcEEEEecCC----ceEEEEECCCCCe
Q 021319 219 DISEMLCVRTFT-KLEWPVRTISFSHTGDYIASASED----LFIDISNVHTGRT 267 (314)
Q Consensus 219 d~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~s~d----~~v~v~~~~~~~~ 267 (314)
|+..... +.+. .....+..++++|+++.|+....+ +.+..+|+.+++.
T Consensus 356 d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 356 DYEGKRV-REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CTTSCEE-EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCCCee-EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 9875543 3333 223356777888888776655444 7899999887653
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=8.4e-10 Score=92.91 Aligned_cols=220 Identities=11% Similarity=0.025 Sum_probs=142.3
Q ss_pred ccEEEEEECCCCC-EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 21 KKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 21 ~~V~~v~~s~~g~-~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
.......|+|++. ++++...++.|..|+.+.. .... + .....+.++.|++++ +++++ .. ..|.+||..++
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~---~~~~--~-~~~~~v~~i~~~~dg-~l~v~-~~-~gl~~~d~~~g 119 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASG---RKTV--H-ALPFMGSALAKISDS-KQLIA-SD-DGLFLRDTATG 119 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTT---EEEE--E-ECSSCEEEEEEEETT-EEEEE-ET-TEEEEEETTTC
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCC---cEEE--E-ECCCcceEEEEeCCC-eEEEE-EC-CCEEEEECCCC
Confidence 3467889999854 5666667889999987642 2222 2 234678999999875 45554 34 45999999888
Q ss_pred ceeeeEEec-----CceEEEEEccCCCEEEEEeC------CCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEE-
Q 021319 100 KCSQQAELS-----GENINITYKPDGTHIAVGNR------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT- 167 (314)
Q Consensus 100 ~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (314)
+........ .....+.++|+|++++.... .+.|..++ ..+.............++|+++++.++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~ 197 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVD 197 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEE
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEE
Confidence 754332221 12456889999987665432 23455555 33322211112245688999999866554
Q ss_pred cCCceEEEEeCC--CC-Cc--eeee---eecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEE
Q 021319 168 TGNGTVEVLTYP--SL-RP--LDTV---VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 239 (314)
Q Consensus 168 ~~~g~~~~~~~~--~~-~~--~~~~---~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~ 239 (314)
..++.+.+|+.. .. .. ...+ ......+..++++++|.+.++...++.|..||. +++.+..+......+.++
T Consensus 198 ~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~ 276 (326)
T 2ghs_A 198 TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCP 276 (326)
T ss_dssp TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEE
T ss_pred CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEE
Confidence 557899999875 33 21 1112 122345788999999998777766788999998 566666666555568999
Q ss_pred EEc-cCCcEEEEec
Q 021319 240 SFS-HTGDYIASAS 252 (314)
Q Consensus 240 ~~s-p~~~~l~s~s 252 (314)
+|+ |+++.|+.++
T Consensus 277 af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 277 AFIGPDASRLLVTS 290 (326)
T ss_dssp EEESTTSCEEEEEE
T ss_pred EEecCCCCEEEEEe
Confidence 998 8887665443
No 220
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=8.7e-12 Score=106.52 Aligned_cols=169 Identities=14% Similarity=0.154 Sum_probs=124.7
Q ss_pred CEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc---------e--eeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEE
Q 021319 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGK---------C--SQQAELSGENINITYKPDGTHIAVGNRDDELTILD 136 (314)
Q Consensus 68 ~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d 136 (314)
+++.|++++.. .++++|+.+ .+++|++...+ . .....+.. +..++| +++.|+++ .++.|.+||
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 57889999875 588888887 55669854322 1 12334455 778899 99999999 889999999
Q ss_pred ccCCeEeeee-ccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeE
Q 021319 137 VRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLV 215 (314)
Q Consensus 137 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i 215 (314)
+++....... .+...+..+.+.+. .+++...+|.+.+|++....... +...++|++|+|+| ++.|..||.+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 9876533221 22334555555433 48888999999999998655432 45689999999999 6789999999
Q ss_pred EEeeCCCcEE--EEEe------e---ecccCeEEEEEccCCcEEEE
Q 021319 216 SLWDISEMLC--VRTF------T---KLEWPVRTISFSHTGDYIAS 250 (314)
Q Consensus 216 ~vwd~~~~~~--~~~~------~---~~~~~v~~~~~sp~~~~l~s 250 (314)
++|+.....+ .+++ . .+...|.+|+|.+++.++++
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999887765 5555 2 25678999999999999886
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.39 E-value=9.4e-10 Score=94.52 Aligned_cols=217 Identities=11% Similarity=0.095 Sum_probs=150.6
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCC----ceeeeEE---e----c-CceEEEEEccCCCEEEEEeCC------CcEEEEEc
Q 021319 76 PKHADLIATASGDKTVRLWDARSG----KCSQQAE---L----S-GENINITYKPDGTHIAVGNRD------DELTILDV 137 (314)
Q Consensus 76 ~~~~~~l~s~~~D~~v~iwd~~~~----~~~~~~~---~----~-~~~~~~~~~~~~~~l~~~~~d------~~i~i~d~ 137 (314)
++...+++++..+++|.++|..+. +..+..+ + . ...-.+...|+| .+++...+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 555667788888999999998644 3333331 1 1 123356788999 66655544 68999999
Q ss_pred cCCeEeeeeccCc----ceeeEEeccCCCeEEEEc-------------------CCceEEEEeCCCCCceeeeeec--cc
Q 021319 138 RKFKPIHRRKFGY----EVNEIAWNMTGEMFFLTT-------------------GNGTVEVLTYPSLRPLDTVVAH--TA 192 (314)
Q Consensus 138 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-------------------~~g~~~~~~~~~~~~~~~~~~~--~~ 192 (314)
.+.+.+.+...+. -...+.|+|+++.++++. ...++.+|++...+.+.++..- ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9999888876442 134577899999888874 3789999999876655555432 23
Q ss_pred ceEEEEE--CCCCCEEEEee------CCCeEEEeeCCCcE--EEEEe--eec----------------ccCeEEEEEccC
Q 021319 193 GCYCIAI--DPMGRYFAVGS------ADSLVSLWDISEML--CVRTF--TKL----------------EWPVRTISFSHT 244 (314)
Q Consensus 193 ~i~~i~~--~~~~~~l~t~~------~dg~i~vwd~~~~~--~~~~~--~~~----------------~~~v~~~~~sp~ 244 (314)
....+.| +|+++++.+++ .+++|.+|....+. .++.+ ... ......|.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 4566666 99999877666 56688877665432 12221 110 123577999999
Q ss_pred CcEEEEecC-CceEEEEECC---CCCeEEEEeccCc---------------cceeEEcCCCCeeEEEe
Q 021319 245 GDYIASASE-DLFIDISNVH---TGRTVHQIPCRAA---------------MNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 245 ~~~l~s~s~-d~~v~v~~~~---~~~~~~~~~~~~~---------------i~~v~~~~~~~~la~~~ 293 (314)
|++|..+.. .+.|.++|+. +.+.+..++.++. -..++++|+++.|..+.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999988765 5789999985 3456666665533 48999999999998888
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=3.3e-10 Score=96.41 Aligned_cols=240 Identities=10% Similarity=-0.076 Sum_probs=148.9
Q ss_pred EEEEeeCCC----cEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEe---------CCCcEEEEeCCCCc
Q 021319 34 KLASGSVDQ----TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS---------GDKTVRLWDARSGK 100 (314)
Q Consensus 34 ~l~s~~~D~----~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---------~D~~v~iwd~~~~~ 100 (314)
.+++-..++ +|.+.|.++.. +.. ++..-..+ .+.++|++..+.++.. .+++|.+||..+++
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~---v~~-~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGV---TLG-HSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTE---EEE-EEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred EEEECCccCCccceEEEEECCCCe---EEE-EEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 344444444 77788876532 222 23322344 6999999766555542 47899999999999
Q ss_pred eeeeEEec--------CceEEEEEccCCCEEEEEeC--CCcEEE--EEccCCeEeeeeccCcc--------eeeEEe---
Q 021319 101 CSQQAELS--------GENINITYKPDGTHIAVGNR--DDELTI--LDVRKFKPIHRRKFGYE--------VNEIAW--- 157 (314)
Q Consensus 101 ~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~--d~~i~i--~d~~~~~~~~~~~~~~~--------~~~~~~--- 157 (314)
........ .....+.++|||++++++.. ...+.+ +|+.+ +..+..+.. ..-+..
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCP 184 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCT
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCC
Confidence 98887664 23456899999999998875 356888 88866 222211100 000111
Q ss_pred ----------------------------------ccCCCeEEEEcCCceEEEEeCCCCC--ceeeeee----------cc
Q 021319 158 ----------------------------------NMTGEMFFLTTGNGTVEVLTYPSLR--PLDTVVA----------HT 191 (314)
Q Consensus 158 ----------------------------------~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~----------~~ 191 (314)
.+++..++.... +.+.+.+..... .+..+.. ..
T Consensus 185 g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred CCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 112222222222 555555553211 1111100 01
Q ss_pred cceEEEEECCCCCEEEEeeC---------CCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcE-EEEec-CCceEEEE
Q 021319 192 AGCYCIAIDPMGRYFAVGSA---------DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDY-IASAS-EDLFIDIS 260 (314)
Q Consensus 192 ~~i~~i~~~~~~~~l~t~~~---------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~s~s-~d~~v~v~ 260 (314)
.....++++|+++.++++.. ++.+.++|+.+.+.+.++.... ....++|+|||++ +++.. .++.|.|+
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVI 342 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIY 342 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEE
Confidence 11222789999988776533 2356799999998888776544 4788999999984 55555 58999999
Q ss_pred ECCCCCeEEEEeccCccceeEEcC
Q 021319 261 NVHTGRTVHQIPCRAAMNSVEWNP 284 (314)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~v~~~~ 284 (314)
|+.+++.+..++-......+++.+
T Consensus 343 D~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 343 DAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp ESSSCEEEEECCCCSCCCEEECCC
T ss_pred ECCCCcEEEEEECCCCCCEEEeec
Confidence 999999999887666666776654
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.35 E-value=2.8e-09 Score=91.56 Aligned_cols=220 Identities=14% Similarity=0.111 Sum_probs=145.0
Q ss_pred CCCCE-EEEeeCCCcEEEeecCCCCCCceeeEEee--------cCCCCEEEEEEcCCCCCEEEEEeCC------CcEEEE
Q 021319 30 CTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELR--------GHADSVDQLCWDPKHADLIATASGD------KTVRLW 94 (314)
Q Consensus 30 ~~g~~-l~s~~~D~~v~iw~~~~~~~~~~~~~~~~--------~h~~~v~~l~~~~~~~~~l~s~~~D------~~v~iw 94 (314)
+++++ ++++..++.|.|+|+.+..........+. +.+ ....+...|++ +++++..+ +.|.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDA--IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSC--EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCCe--EEEEcCCCcCCCCCCeEEEE
Confidence 77776 45566889999999864322111111121 111 23345566774 77777766 789999
Q ss_pred eCCCCceeeeEEecCc----eEEEEEccCCCEEEEEe-------------------CCCcEEEEEccCCeEeeeeccC--
Q 021319 95 DARSGKCSQQAELSGE----NINITYKPDGTHIAVGN-------------------RDDELTILDVRKFKPIHRRKFG-- 149 (314)
Q Consensus 95 d~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~-- 149 (314)
|..+.+.+...+.... ...+.|+|+++.+++.. .+.+|.+||+.+.+.+.++..+
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 9999988877654322 22377899999888885 3688999999988877777665
Q ss_pred -cceeeEEe--ccCCCeEEEEc------CCceEEEEeCCCCC--ceeee--ee----------------cccceEEEEEC
Q 021319 150 -YEVNEIAW--NMTGEMFFLTT------GNGTVEVLTYPSLR--PLDTV--VA----------------HTAGCYCIAID 200 (314)
Q Consensus 150 -~~~~~~~~--~~~~~~~~~~~------~~g~~~~~~~~~~~--~~~~~--~~----------------~~~~i~~i~~~ 200 (314)
.....+.| +|+++..++++ .++++.+|.....+ ....+ .. -...+..|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 23455555 99999887776 45677665443211 00000 00 02346889999
Q ss_pred CCCCEEEEeeC-CCeEEEeeCCC---cEEEEEeeecc----------c----CeEEEEEccCCcEEEEec
Q 021319 201 PMGRYFAVGSA-DSLVSLWDISE---MLCVRTFTKLE----------W----PVRTISFSHTGDYIASAS 252 (314)
Q Consensus 201 ~~~~~l~t~~~-dg~i~vwd~~~---~~~~~~~~~~~----------~----~v~~~~~sp~~~~l~s~s 252 (314)
+||++|.++.. .+.|.+||+.+ .+.+..+.... . ....++++|||++|+.+.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999887766 57999999852 35555443220 1 257799999999999888
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.34 E-value=3.4e-10 Score=105.08 Aligned_cols=226 Identities=12% Similarity=0.095 Sum_probs=144.8
Q ss_pred cCCCCEEEEEEcCCCCCEEEEE----eCCCcEEEEeCCCCceeeeEEecCc-eEEEEEccCCCEEEEEeCCCc-------
Q 021319 64 GHADSVDQLCWDPKHADLIATA----SGDKTVRLWDARSGKCSQQAELSGE-NINITYKPDGTHIAVGNRDDE------- 131 (314)
Q Consensus 64 ~h~~~v~~l~~~~~~~~~l~s~----~~D~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~~------- 131 (314)
+|...+..++|+|++..++.+. +.+..|++||+.+++..... .... ...++|+ |++.|+.+..+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 3556788899999865333333 33367999999999865432 2222 2457899 9999998887743
Q ss_pred ------EEEEEccCCe----Eeeeecc--CcceeeEEeccCCCeEEEEcC----CceEEEEeCCCCC-ceeeeeecccce
Q 021319 132 ------LTILDVRKFK----PIHRRKF--GYEVNEIAWNMTGEMFFLTTG----NGTVEVLTYPSLR-PLDTVVAHTAGC 194 (314)
Q Consensus 132 ------i~i~d~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~-~~~~~~~~~~~i 194 (314)
|.+|++.+.+ .+..... ......+.|+++++.+++... .+.++++++.... ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 8888886643 2222221 223567889999998866543 2478888876543 344455555544
Q ss_pred EEEEECCCCCEEE-EeeCC---CeEEEeeCCCcEE--EEEeeecccCeEEEEEccCCcEEEEecC-Cc--eEEEEECCCC
Q 021319 195 YCIAIDPMGRYFA-VGSAD---SLVSLWDISEMLC--VRTFTKLEWPVRTISFSHTGDYIASASE-DL--FIDISNVHTG 265 (314)
Q Consensus 195 ~~i~~~~~~~~l~-t~~~d---g~i~vwd~~~~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~s~-d~--~v~v~~~~~~ 265 (314)
... +++++..|+ ....+ +.|..+|+.++.. .+.+..+...+. .|+|++++|+.... ++ .|.+|+.. +
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~-g 359 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE-G 359 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT-S
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC-C
Confidence 444 556665544 44443 5799999987543 234555555554 89999998877665 44 68888876 4
Q ss_pred CeEEEEe--ccCccceeEEcCCCCeeEEEecC
Q 021319 266 RTVHQIP--CRAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 266 ~~~~~~~--~~~~i~~v~~~~~~~~la~~~~d 295 (314)
...+.+. ..+.+..+.++|++..|+....+
T Consensus 360 ~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 360 KRVREVALPGLGSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp CEEEEECCSSSSEEEECCCCTTCSCEEEEEEC
T ss_pred CeeEEeecCCCceEEeeecCCCCCEEEEEecC
Confidence 4455554 23467788889988877666544
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.32 E-value=2.7e-10 Score=96.98 Aligned_cols=221 Identities=13% Similarity=-0.006 Sum_probs=143.5
Q ss_pred EEEEEeCCC----cEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEe----------CCCcEEEEEccCCeEeeee
Q 021319 81 LIATASGDK----TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN----------RDDELTILDVRKFKPIHRR 146 (314)
Q Consensus 81 ~l~s~~~D~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~ 146 (314)
..++...++ +|.++|..+++.+..+...... .+.++||+++++++. .++.|.++|+.+.+.+.++
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE
Confidence 444554454 8889999999999888877777 899999999999886 3678999999999998887
Q ss_pred ccC--------cceeeEEeccCCCeEEEEcC--CceEEE--EeCCCCCceeeeee-c------ccceEEEEE--------
Q 021319 147 KFG--------YEVNEIAWNMTGEMFFLTTG--NGTVEV--LTYPSLRPLDTVVA-H------TAGCYCIAI-------- 199 (314)
Q Consensus 147 ~~~--------~~~~~~~~~~~~~~~~~~~~--~g~~~~--~~~~~~~~~~~~~~-~------~~~i~~i~~-------- 199 (314)
..+ .....++++|+++.++++.. ...+.+ +|... +..+.. . .+.-.-+++
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEE
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEE
Confidence 654 34678999999999988864 456777 77643 111110 0 000000111
Q ss_pred -----------------------------CCCCCEEEEeeCCCeEEEeeCCCc--EEEEEeee-------cc---cCeEE
Q 021319 200 -----------------------------DPMGRYFAVGSADSLVSLWDISEM--LCVRTFTK-------LE---WPVRT 238 (314)
Q Consensus 200 -----------------------------~~~~~~l~t~~~dg~i~vwd~~~~--~~~~~~~~-------~~---~~v~~ 238 (314)
.+++..++..+. +.+.+.|+... ..+..+.. .. .....
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSC
T ss_pred EECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCccee
Confidence 222222222333 56666776432 22222210 00 11122
Q ss_pred EEEccCCcEEEEecC---------CceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCcccccccceEEec
Q 021319 239 ISFSHTGDYIASASE---------DLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIY 309 (314)
Q Consensus 239 ~~~sp~~~~l~s~s~---------d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~ 309 (314)
++|+|+++.++.+.. +..+.++|+.+.+.+..++.......++|+|+++.++++... .++++-++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~------~~~~VsVI 342 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSA------GTEVLDIY 342 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEET------TTTEEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccC------CCCeEEEE
Confidence 789999988876533 235669999999999888877789999999999865555541 02566677
Q ss_pred ccc
Q 021319 310 GFE 312 (314)
Q Consensus 310 ~~~ 312 (314)
|.+
T Consensus 343 D~~ 345 (368)
T 1mda_H 343 DAA 345 (368)
T ss_dssp ESS
T ss_pred ECC
Confidence 654
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.31 E-value=2.4e-08 Score=81.41 Aligned_cols=251 Identities=9% Similarity=0.023 Sum_probs=151.7
Q ss_pred CEEEEeeCCCcEEEeecCCCCCCcee-eEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEec-Cc
Q 021319 33 TKLASGSVDQTARVWHIEPHGHGKVK-DIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS-GE 110 (314)
Q Consensus 33 ~~l~s~~~D~~v~iw~~~~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~-~~ 110 (314)
.+|+-+.. +.|+.++++........ ...+......+..++|++.++.+.++-...+.|..+|...+......... ..
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34444443 46777777643211100 00111122346789999876667777777899999998765433222211 35
Q ss_pred eEEEEEccCCCEEEEE-eCCCcEEEEEccCCeEeeeeccC-cceeeEEeccCCCeEEEEc-C--CceEEEEeCCCCCcee
Q 021319 111 NINITYKPDGTHIAVG-NRDDELTILDVRKFKPIHRRKFG-YEVNEIAWNMTGEMFFLTT-G--NGTVEVLTYPSLRPLD 185 (314)
Q Consensus 111 ~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~--~g~~~~~~~~~~~~~~ 185 (314)
...+++.+++..|+++ ...+.|.++++............ .....+++++++..++++. . .+.+..++..... ..
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cE
Confidence 6678899876655554 45678999887643211111112 3567889999655554444 3 4678777765432 22
Q ss_pred eee-ecccceEEEEECCCCCEEE-EeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECC
Q 021319 186 TVV-AHTAGCYCIAIDPMGRYFA-VGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVH 263 (314)
Q Consensus 186 ~~~-~~~~~i~~i~~~~~~~~l~-t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~ 263 (314)
.+. .....+..+++++++..|. +-...+.|..+|.........+..... ...++.. .+..+++....+.|.++|..
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~-P~gi~~d-~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY-PFAVTSY-GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS-EEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCC-ceEEEEe-CCEEEEEECCCCeEEEEeCC
Confidence 221 2224578999999876655 444567999999975543333333333 3556654 34444444566899999999
Q ss_pred CCCeEEEEeccC--ccceeEEcCCCC
Q 021319 264 TGRTVHQIPCRA--AMNSVEWNPKYN 287 (314)
Q Consensus 264 ~~~~~~~~~~~~--~i~~v~~~~~~~ 287 (314)
+++.+..++... ....+++.|++.
T Consensus 238 ~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 238 ISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCceEEEccccccccceeeecCccC
Confidence 999888886533 478899998875
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.28 E-value=2.5e-09 Score=98.83 Aligned_cols=261 Identities=10% Similarity=0.002 Sum_probs=169.9
Q ss_pred CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCC---------CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCcee
Q 021319 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA---------DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCS 102 (314)
Q Consensus 32 g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~---------~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~ 102 (314)
+..+..++.++.|.-+|.+++. .+......... .....++.. +..|+.++.|+.|..+|..+|+..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~a~~---~~~v~v~~~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGN--RIWTYDPQIDRSTGFKGCCDVVNRGVALW---KGKVYVGAWDGRLIALDAATGKEV 151 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTE--EEEEECCCCCGGGGGGSSSCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCeEEEEECCCCc--EEEEEcCCCCccccccccccCCCCCceEE---CCEEEEEcCCCEEEEEECCCCCEE
Confidence 4466667778888888876543 22222221110 000122322 347778889999999999999887
Q ss_pred eeEEec-C-----ceEE-EEEccCCCEEEEEeC------CCcEEEEEccCCeEeeeeccCcce-----------------
Q 021319 103 QQAELS-G-----ENIN-ITYKPDGTHIAVGNR------DDELTILDVRKFKPIHRRKFGYEV----------------- 152 (314)
Q Consensus 103 ~~~~~~-~-----~~~~-~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~----------------- 152 (314)
-..... . .... ... .+..++++.. ++.|..+|.++.+.+.+.......
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred eeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 665543 1 1110 111 2345555543 688999999998887665432111
Q ss_pred ----------------eeEEeccCCCeEEEEcCCc-------------------eEEEEeCCCCCceeeeee--c-----
Q 021319 153 ----------------NEIAWNMTGEMFFLTTGNG-------------------TVEVLTYPSLRPLDTVVA--H----- 190 (314)
Q Consensus 153 ----------------~~~~~~~~~~~~~~~~~~g-------------------~~~~~~~~~~~~~~~~~~--~----- 190 (314)
...++.+.+..++++..++ .+..++..+.+.+-.+.. |
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~ 309 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDY 309 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred cccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccc
Confidence 2456778888888887664 488888887776655442 2
Q ss_pred --ccceEEEEECCCC---CEEEEeeCCCeEEEeeCCCcEEEEEeeecccC-----------e------------------
Q 021319 191 --TAGCYCIAIDPMG---RYFAVGSADSLVSLWDISEMLCVRTFTKLEWP-----------V------------------ 236 (314)
Q Consensus 191 --~~~i~~i~~~~~~---~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~-----------v------------------ 236 (314)
...+..+....+| +.++.++.+|.+.++|..+++.+..+.....+ +
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 1223333444467 68999999999999999999887655321100 1
Q ss_pred ------EEEEEccCCcEEEEecC-------------------------------------------CceEEEEECCCCCe
Q 021319 237 ------RTISFSHTGDYIASASE-------------------------------------------DLFIDISNVHTGRT 267 (314)
Q Consensus 237 ------~~~~~sp~~~~l~s~s~-------------------------------------------d~~v~v~~~~~~~~ 267 (314)
..++|+|+..+++..+. .+.|..||..+|+.
T Consensus 390 ~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~ 469 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA 469 (677)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE
T ss_pred ccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE
Confidence 14688999888877543 27899999999999
Q ss_pred EEEEeccCccceeEEcCCCCeeEEEecCCccc
Q 021319 268 VHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKY 299 (314)
Q Consensus 268 ~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~ 299 (314)
+.+++...++.+..+.+.+.++++++.|+.++
T Consensus 470 ~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~ 501 (677)
T 1kb0_A 470 AWSVEHVSPWNGGTLTTAGNVVFQGTADGRLV 501 (677)
T ss_dssp EEEEEESSSCCCCEEEETTTEEEEECTTSEEE
T ss_pred EeecCCCCCCcCcceEeCCCEEEEECCCCcEE
Confidence 99988777777777888888888887665443
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.27 E-value=5.5e-12 Score=108.20 Aligned_cols=201 Identities=9% Similarity=0.079 Sum_probs=115.5
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCc--ceeeEE
Q 021319 79 ADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGY--EVNEIA 156 (314)
Q Consensus 79 ~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~ 156 (314)
+..+++++.|+.|..||..+|+....... ....+..+..++..+++++.|+.+..||.++.+.+....... .+.. .
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~-s 86 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA-S 86 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT-C
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc-C
Confidence 35888999999999999999998776655 444444445677777788899999999998776654433211 1100 0
Q ss_pred ecc-CCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccC
Q 021319 157 WNM-TGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWP 235 (314)
Q Consensus 157 ~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~ 235 (314)
... .+..++++..++.+..|+..+.+.+..+..+. ...++|++..+++++.|+.|+.||.++++.+..+....
T Consensus 87 p~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-- 160 (369)
T 2hz6_A 87 PCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-- 160 (369)
T ss_dssp SCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--
T ss_pred ceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--
Confidence 011 34456667778999999988777665554432 23456678889999999999999999887654443221
Q ss_pred eEEEEEccCC---cEEEEecCCceEEEEECCCCCeEEEEeccCccce-eEEcCCCC
Q 021319 236 VRTISFSHTG---DYIASASEDLFIDISNVHTGRTVHQIPCRAAMNS-VEWNPKYN 287 (314)
Q Consensus 236 v~~~~~sp~~---~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~~-v~~~~~~~ 287 (314)
....+++++. ..++.++.|+.+..||..+|+.+.+.....++.. ..+++++.
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCce
Confidence 1222334432 5677789999999999999999988776555543 35555553
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.26 E-value=3.3e-09 Score=97.94 Aligned_cols=256 Identities=11% Similarity=0.066 Sum_probs=167.1
Q ss_pred CCCEEEEeeCCCcEEEeecCCCCCCceeeEEee-cCC--CCEEE-EEEcCCCCCEEEEEeC------CCcEEEEeCCCCc
Q 021319 31 TGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-GHA--DSVDQ-LCWDPKHADLIATASG------DKTVRLWDARSGK 100 (314)
Q Consensus 31 ~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~-~h~--~~v~~-l~~~~~~~~~l~s~~~------D~~v~iwd~~~~~ 100 (314)
++..|+.++.|+.|..+|..++. .+...... ... ..+.. ... .+ ..++.++. ++.|+.+|..+|+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~--~~W~~~~~~~~~~~~~~~~~p~v--~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGK--EVWHQNTFEGQKGSLTITGAPRV--FK-GKVIIGNGGAEYGVRGYITAYDAETGE 201 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCC--EEEEEETTTTCCSSCBCCSCCEE--ET-TEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred ECCEEEEEcCCCEEEEEECCCCC--EEeeecCCcCcCcCcccccCcEE--EC-CEEEEEecccccCCCCEEEEEECCCCc
Confidence 35678888889999999987643 22222221 000 11111 111 12 34444442 7999999999998
Q ss_pred eeeeEEecCce---------------------------------EEEEEccCCCEEEEEeCCC-----------------
Q 021319 101 CSQQAELSGEN---------------------------------INITYKPDGTHIAVGNRDD----------------- 130 (314)
Q Consensus 101 ~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~~d~----------------- 130 (314)
.+-........ ..++++|++..++++..++
T Consensus 202 ~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~ 281 (677)
T 1kb0_A 202 RKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLY 281 (677)
T ss_dssp EEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred EEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCee
Confidence 76554432111 1367888999999887664
Q ss_pred --cEEEEEccCCeEeeeeccCc----------ceeeEEeccCC---CeEEEEcCCceEEEEeCCCCCceeeeeecc----
Q 021319 131 --ELTILDVRKFKPIHRRKFGY----------EVNEIAWNMTG---EMFFLTTGNGTVEVLTYPSLRPLDTVVAHT---- 191 (314)
Q Consensus 131 --~i~i~d~~~~~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---- 191 (314)
.|..+|.++.+.+..++... ....+....+| ..++.+..+|.+++++..+.+.+..+....
T Consensus 282 ~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~ 361 (677)
T 1kb0_A 282 LASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA 361 (677)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence 49999999998877655321 11122223355 567788889999999988777654432110
Q ss_pred -------cce------------------------EEEEECCCCCEEEEeeC-----------------------------
Q 021319 192 -------AGC------------------------YCIAIDPMGRYFAVGSA----------------------------- 211 (314)
Q Consensus 192 -------~~i------------------------~~i~~~~~~~~l~t~~~----------------------------- 211 (314)
..+ ..++++|++.++++...
T Consensus 362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 000 15688998888776543
Q ss_pred --------------CCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCcc
Q 021319 212 --------------DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM 277 (314)
Q Consensus 212 --------------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i 277 (314)
.|.|..||+.+++.+-++.. ..++....+++.+..++.++.|+.++++|..+|+.+..+.....+
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 520 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGV 520 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCc
Confidence 27899999999998776643 334455567788889999999999999999999999988754433
Q ss_pred --ceeEEcCCCCeeEEE
Q 021319 278 --NSVEWNPKYNLLAYA 292 (314)
Q Consensus 278 --~~v~~~~~~~~la~~ 292 (314)
.-+.|.++++.++..
T Consensus 521 ~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 521 VAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp CSCCEEEEETTEEEEEE
T ss_pred ccCCEEEEeCCEEEEEE
Confidence 345666788655433
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.25 E-value=9.3e-09 Score=83.05 Aligned_cols=193 Identities=8% Similarity=0.013 Sum_probs=138.7
Q ss_pred EEEEEEcCCCCCEEEEEeC--CCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEE-eCCCcEEEEEccCCeEeee
Q 021319 69 VDQLCWDPKHADLIATASG--DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG-NRDDELTILDVRKFKPIHR 145 (314)
Q Consensus 69 v~~l~~~~~~~~~l~s~~~--D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~ 145 (314)
...+.|+++ +.+.++.+. +++|++.|..+++......+........+..+++.|+.. -.++.+.++|..+.+.+.+
T Consensus 23 ~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 23 TQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred cccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 578999986 345555543 689999999999988887765543333333345566554 4577899999999998887
Q ss_pred eccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecc-----cceEEEEECCCCCEEEEeeCCCeEEEeeC
Q 021319 146 RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-----AGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (314)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~t~~~dg~i~vwd~ 220 (314)
+..+ .......++++..++++..++++.+++..+.+....+.... ..++.+.+. +++..+....++.|.+.|.
T Consensus 102 i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 102 FTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp EECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEET
T ss_pred EECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEEC
Confidence 7665 22334456688888888889999999998877666654221 136677777 6766666667789999999
Q ss_pred CCcEEEEEeeecc-------------cCeEEEEEccCCc-EEEEecCCceEEEEECCC
Q 021319 221 SEMLCVRTFTKLE-------------WPVRTISFSHTGD-YIASASEDLFIDISNVHT 264 (314)
Q Consensus 221 ~~~~~~~~~~~~~-------------~~v~~~~~sp~~~-~l~s~s~d~~v~v~~~~~ 264 (314)
.+++.+..+.... .....|+|+|+++ +++++.....+.+.++..
T Consensus 180 ~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 180 KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 9999888775321 2457899999976 555666778888887654
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.23 E-value=5.8e-09 Score=84.26 Aligned_cols=194 Identities=8% Similarity=0.063 Sum_probs=131.9
Q ss_pred eeeEEecCc--eEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeeeeccCcce--eeEEeccCCCeEEEEcCCceEEE
Q 021319 102 SQQAELSGE--NINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRRKFGYEV--NEIAWNMTGEMFFLTTGNGTVEV 175 (314)
Q Consensus 102 ~~~~~~~~~--~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~ 175 (314)
+....+... ...+.+++++.+.++.+. ++.|.++|+.+.+.+.....+... ..+++. .+..+++.-.++.+.+
T Consensus 12 v~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWLKNIGFI 90 (266)
T ss_dssp EEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred EEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEecCCEEEE
Confidence 344444432 356888988654444443 578999999999888776654332 233433 2345556667899999
Q ss_pred EeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc--c---CeEEEEEccCCcEEEE
Q 021319 176 LTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE--W---PVRTISFSHTGDYIAS 250 (314)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~--~---~v~~~~~sp~~~~l~s 250 (314)
++..+.+.+.++......- ..+++||+.++++..++.|.++|..+.+.+.++.-.. . .++.+.|. ++...+.
T Consensus 91 iD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn 167 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWAN 167 (266)
T ss_dssp EETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEe
Confidence 9998888777664221222 3355577766666678899999999988877765322 1 35678887 7776666
Q ss_pred ecCCceEEEEECCCCCeEEEEecc--------------CccceeEEcCCCCee-EEEecCCccc
Q 021319 251 ASEDLFIDISNVHTGRTVHQIPCR--------------AAMNSVEWNPKYNLL-AYAGDDKNKY 299 (314)
Q Consensus 251 ~s~d~~v~v~~~~~~~~~~~~~~~--------------~~i~~v~~~~~~~~l-a~~~~d~~~~ 299 (314)
...+..|.+.|..+++.+..+... ...+.++|+|+++.| +++......|
T Consensus 168 ~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 168 IWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp ETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred cCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 667889999999999999888753 134899999998655 4444555444
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.23 E-value=6.8e-09 Score=96.10 Aligned_cols=262 Identities=11% Similarity=0.091 Sum_probs=166.8
Q ss_pred CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCC--------CCE-EEEEEcCCCCCEEEEEeCCCcEEEEeCCCCcee
Q 021319 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA--------DSV-DQLCWDPKHADLIATASGDKTVRLWDARSGKCS 102 (314)
Q Consensus 32 g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~--------~~v-~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~ 102 (314)
+..+..++.++.|..+|.+++.. +......... ..+ ..++.. +..|+.++.|+.|..+|..+|+..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~v~v~~~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRL--IWKYDPQSDRHRAGEACCDAVNRGVAVW---KGKVYVGVLDGRLEAIDAKTGQRA 144 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCE--EEEECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCeEEEEECCCCce--eEEEcCCCCccccccccccCCCCccEEE---CCEEEEEccCCEEEEEECCCCCEe
Confidence 55677777788999999876432 2222211100 001 112222 247788889999999999999877
Q ss_pred eeEEec-Cc--eEEEEEcc---CCCEEEEEe------CCCcEEEEEccCCeEeeeeccCc--------------------
Q 021319 103 QQAELS-GE--NINITYKP---DGTHIAVGN------RDDELTILDVRKFKPIHRRKFGY-------------------- 150 (314)
Q Consensus 103 ~~~~~~-~~--~~~~~~~~---~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~-------------------- 150 (314)
-..... .. ...+...| ++ .++++. .++.+..+|.++.+.+.+.....
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 223 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWF 223 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCC
T ss_pred eeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccC
Confidence 555442 10 00111111 44 444443 36889999999988876543210
Q ss_pred ------------ceeeEEeccCCCeEEEEcCCce-------------------EEEEeCCCCCceeeeee--cc------
Q 021319 151 ------------EVNEIAWNMTGEMFFLTTGNGT-------------------VEVLTYPSLRPLDTVVA--HT------ 191 (314)
Q Consensus 151 ------------~~~~~~~~~~~~~~~~~~~~g~-------------------~~~~~~~~~~~~~~~~~--~~------ 191 (314)
.....++.+....++++..++. +..++..+.+.+-.+.. |.
T Consensus 224 g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~ 303 (689)
T 1yiq_A 224 GDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTA 303 (689)
T ss_dssp SSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCC
T ss_pred CceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccC
Confidence 0024567778888888887764 88999888877655543 21
Q ss_pred -cceEEEEECCCCC---EEEEeeCCCeEEEeeCCCcEEEEEeeecc--c-------------------------------
Q 021319 192 -AGCYCIAIDPMGR---YFAVGSADSLVSLWDISEMLCVRTFTKLE--W------------------------------- 234 (314)
Q Consensus 192 -~~i~~i~~~~~~~---~l~t~~~dg~i~vwd~~~~~~~~~~~~~~--~------------------------------- 234 (314)
..+....+..+|+ .++.++.+|.++++|..+++.+....... +
T Consensus 304 ~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 304 TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 1122223333565 78899999999999999998764322111 0
Q ss_pred ------CeEEEEEccCCcEEEEecC---------------------------------------------CceEEEEECC
Q 021319 235 ------PVRTISFSHTGDYIASASE---------------------------------------------DLFIDISNVH 263 (314)
Q Consensus 235 ------~v~~~~~sp~~~~l~s~s~---------------------------------------------d~~v~v~~~~ 263 (314)
....++|+|+..+++..+. ++.+..||..
T Consensus 384 ~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~ 463 (689)
T 1yiq_A 384 AFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV 463 (689)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT
T ss_pred CcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC
Confidence 0123688998887776532 4789999999
Q ss_pred CCCeEEEEeccCccceeEEcCCCCeeEEEecCCccc
Q 021319 264 TGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKY 299 (314)
Q Consensus 264 ~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~ 299 (314)
+|+.+.+++...+...-.+...+.++++++.|+.++
T Consensus 464 tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~ 499 (689)
T 1yiq_A 464 KQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVI 499 (689)
T ss_dssp TTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEE
T ss_pred CCCeEeEccCCCCccCccceECCCEEEEECCCCcEE
Confidence 999999988777777667777888888888775433
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.22 E-value=1.3e-08 Score=94.21 Aligned_cols=259 Identities=11% Similarity=0.113 Sum_probs=165.1
Q ss_pred CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCC---CEEE-EEEcCCCCCEEEEEe------CCCcEEEEeCCCCce
Q 021319 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD---SVDQ-LCWDPKHADLIATAS------GDKTVRLWDARSGKC 101 (314)
Q Consensus 32 g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~---~v~~-l~~~~~~~~~l~s~~------~D~~v~iwd~~~~~~ 101 (314)
+..++.++.|+.|..+|.+++. .+.......+.. .+.. -.+. + + .++.++ .++.|..||..+|+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~--~~W~~~~~~~~~~~~~~~~sP~v~-~-g-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQ--RAWSVDTRADHKRSYTITGAPRVV-N-G-KVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCC--EEEEEECCSCTTSCCBCCSCCEEE-T-T-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CCEEEEEccCCEEEEEECCCCC--EeeeecCcCCCCCCccccCCcEEE-C-C-EEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 4578888899999999987643 222222210111 1110 0111 2 3 343443 378999999999987
Q ss_pred eeeEEecC-------------------------------ce-EEEEEccCCCEEEEEeCCCc------------------
Q 021319 102 SQQAELSG-------------------------------EN-INITYKPDGTHIAVGNRDDE------------------ 131 (314)
Q Consensus 102 ~~~~~~~~-------------------------------~~-~~~~~~~~~~~l~~~~~d~~------------------ 131 (314)
.-...... .. ..+++.|++..++++..++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~ 275 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS 275 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 65443210 00 13678888999999887763
Q ss_pred -EEEEEccCCeEeeeeccC-c---------ceeeEEeccCCC---eEEEEcCCceEEEEeCCCCCceeeeeecc------
Q 021319 132 -LTILDVRKFKPIHRRKFG-Y---------EVNEIAWNMTGE---MFFLTTGNGTVEVLTYPSLRPLDTVVAHT------ 191 (314)
Q Consensus 132 -i~i~d~~~~~~~~~~~~~-~---------~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------ 191 (314)
|..+|.++.+.+...+.. . +........++. .++.+..+|.+++++..+.+.+.......
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 999999999888765432 1 111111222443 67777889999999988776652211000
Q ss_pred -------------------------------c--ceEEEEECCCCCEEEEeeC---------------------------
Q 021319 192 -------------------------------A--GCYCIAIDPMGRYFAVGSA--------------------------- 211 (314)
Q Consensus 192 -------------------------------~--~i~~i~~~~~~~~l~t~~~--------------------------- 211 (314)
+ .-..++++|+..++++...
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 0 0113688888877776522
Q ss_pred ------------------CCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec
Q 021319 212 ------------------DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC 273 (314)
Q Consensus 212 ------------------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~ 273 (314)
+|.|+.||+.+++.+-++..+. ++..-.++..+.+++.|+.|+.+++||..+|+.+.++..
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 3789999999999887765443 333345667888999999999999999999999998875
Q ss_pred cCcc--ceeEEcCCCCe-eEEEecCC
Q 021319 274 RAAM--NSVEWNPKYNL-LAYAGDDK 296 (314)
Q Consensus 274 ~~~i--~~v~~~~~~~~-la~~~~d~ 296 (314)
...+ .-+.|..+|+. +++.+..+
T Consensus 515 ~~~~~~~p~ty~~~G~qyv~~~~G~g 540 (689)
T 1yiq_A 515 ASGVMAAPVTYSVDGEQYVTFMAGWG 540 (689)
T ss_dssp SSCCCSCCEEEEETTEEEEEEEECCC
T ss_pred CCCcccCceEEEECCEEEEEEEecCC
Confidence 4333 45777788864 44444433
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.22 E-value=1e-09 Score=97.48 Aligned_cols=221 Identities=13% Similarity=0.113 Sum_probs=153.2
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCceeeeEEe--cCceEEEEE-c-cCCCEEEEEeC------------------CCcEEE
Q 021319 77 KHADLIATASGDKTVRLWDARSGKCSQQAEL--SGENINITY-K-PDGTHIAVGNR------------------DDELTI 134 (314)
Q Consensus 77 ~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~--~~~~~~~~~-~-~~~~~l~~~~~------------------d~~i~i 134 (314)
++..++++...+.+|.+.|+.+.++.....+ ....-.+++ . |+++++++++. ++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 3444556666678899999999998885554 334556776 4 99999998852 457999
Q ss_pred EEccCCeEeeeeccCcceeeEEeccCCCeEEEEcCCc--------------------------------------eEEEE
Q 021319 135 LDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNG--------------------------------------TVEVL 176 (314)
Q Consensus 135 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------------------------------------~~~~~ 176 (314)
.|..+.+...++..+.....++.++++..+++++.+. .+.++
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 9999998888887765777888999999888887542 24555
Q ss_pred eCCC--CCc-eeeeeecccceEEEEECCCCCEEEEee-CCCeEEEeeCCCcE------------EEEEeeecccCeEEEE
Q 021319 177 TYPS--LRP-LDTVVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEML------------CVRTFTKLEWPVRTIS 240 (314)
Q Consensus 177 ~~~~--~~~-~~~~~~~~~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~------------~~~~~~~~~~~v~~~~ 240 (314)
|... .+. +..+. -...+.++.++|||+++++++ .+.+|.++|+.+.+ ...+.. .......++
T Consensus 260 D~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~a 337 (595)
T 1fwx_A 260 DGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTA 337 (595)
T ss_dssp ECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEE
T ss_pred eCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEE
Confidence 5544 222 22222 233567899999999866554 56899999998653 233332 233578899
Q ss_pred EccCCcEEEEecCCceEEEEECCC----------CCeEEEEeccCc------cceeEEcCCCCeeEEEec-CCccc
Q 021319 241 FSHTGDYIASASEDLFIDISNVHT----------GRTVHQIPCRAA------MNSVEWNPKYNLLAYAGD-DKNKY 299 (314)
Q Consensus 241 ~sp~~~~l~s~s~d~~v~v~~~~~----------~~~~~~~~~~~~------i~~v~~~~~~~~la~~~~-d~~~~ 299 (314)
|+|+|...++.-.|+.|.+|++.+ ...+.+++-.-. -..+..+|||++|.+... .+.+|
T Consensus 338 F~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 338 FDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp ECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred ECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 999995445566799999999877 445555553221 245577899999988775 33555
No 235
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=9.4e-10 Score=93.30 Aligned_cols=230 Identities=14% Similarity=0.093 Sum_probs=144.8
Q ss_pred ecccccEEEEEECCCCCEEEEeeC-----CCcEEEeecCCCCCCceeeEEee----cCCCCEEEEEEcCCCCCEEEEEe-
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSV-----DQTARVWHIEPHGHGKVKDIELR----GHADSVDQLCWDPKHADLIATAS- 86 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~-----D~~v~iw~~~~~~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~s~~- 86 (314)
.+|...+..++++++|.++++-.. ++.|.+||+.+.. ....+.+. .+...+..+++++.++.+.++-.
T Consensus 63 ~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~ 140 (343)
T 2qe8_A 63 IITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPA 140 (343)
T ss_dssp CCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECC
T ss_pred ccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCc
Confidence 356778999999999987665433 5789999986432 12222332 12234688999876555556665
Q ss_pred --CCCcEEEEeCCCCceeeeEEec-C-ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCC
Q 021319 87 --GDKTVRLWDARSGKCSQQAELS-G-ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE 162 (314)
Q Consensus 87 --~D~~v~iwd~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (314)
.++.|.+||..+++..+....+ . ......+.++|..+.+...++.+..|. .....++++++++
T Consensus 141 ~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~ 207 (343)
T 2qe8_A 141 PDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH-------------LGVNGIVLDAENE 207 (343)
T ss_dssp SGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC-------------CCEEEEEECTTSC
T ss_pred cCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee-------------cccceeEeccCCC
Confidence 6889999999888754433110 0 000023344666666666666654442 1356789999998
Q ss_pred eEEEEcCCc-eEEEEeCC---CCC-----cee--eeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee
Q 021319 163 MFFLTTGNG-TVEVLTYP---SLR-----PLD--TVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK 231 (314)
Q Consensus 163 ~~~~~~~~g-~~~~~~~~---~~~-----~~~--~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~ 231 (314)
.++++...+ .+..++.. ... ... ...++...+..++++++|+++++...++.|.+||..+++.......
T Consensus 208 ~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~ 287 (343)
T 2qe8_A 208 WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD 287 (343)
T ss_dssp EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC
Confidence 777665444 66665532 110 000 1123444567899999999999988899999999855553222221
Q ss_pred c-ccCeEEEEEccCCcEEEEecCCceEEEEE
Q 021319 232 L-EWPVRTISFSHTGDYIASASEDLFIDISN 261 (314)
Q Consensus 232 ~-~~~v~~~~~sp~~~~l~s~s~d~~v~v~~ 261 (314)
. -..+..++|.|++.++++.+....+.++.
T Consensus 288 ~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 288 EKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp GGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CceecCCeeEECCCCcEEEEeCccccccccc
Confidence 1 23578999999999888887665554443
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.19 E-value=7e-09 Score=92.18 Aligned_cols=232 Identities=15% Similarity=0.117 Sum_probs=158.4
Q ss_pred CCCCEEEEee-CCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEE-c-CCCCCEEEEEe------------------CC
Q 021319 30 CTGTKLASGS-VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCW-D-PKHADLIATAS------------------GD 88 (314)
Q Consensus 30 ~~g~~l~s~~-~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~-~-~~~~~~l~s~~------------------~D 88 (314)
+||+++..+. .+..|.+.|+++... ...++++. ......+++ . |+. .+++.++ .+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~--~~ii~ip~-g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKC--DAILEIPN-AKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEE--EEEEECSS-CCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceE--eeEEeCCC-CCCCcceeeeecCCC-cEEEEecccccccCCCCcccccccccC
Confidence 3787765554 566799999876432 11123332 234677777 4 665 4555553 34
Q ss_pred CcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCC--------------------------------------
Q 021319 89 KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDD-------------------------------------- 130 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-------------------------------------- 130 (314)
+.+.+.|..+.+...+....++.-.++++|+|+++++.+.+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred ceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 688999999998888888766677788999999999888553
Q ss_pred cEEEEEccC--CeE-eeeeccCcceeeEEeccCCCeEEEEc-CCceEEEEeCCCCC------------ceeeeeecccce
Q 021319 131 ELTILDVRK--FKP-IHRRKFGYEVNEIAWNMTGEMFFLTT-GNGTVEVLTYPSLR------------PLDTVVAHTAGC 194 (314)
Q Consensus 131 ~i~i~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~------------~~~~~~~~~~~i 194 (314)
.+.+.|.++ .+. +..+..+.....+.++|+|++++++. ...++.+++..+.+ ....+ .-..++
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP 333 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGP 333 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCE
T ss_pred cEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCc
Confidence 466777766 333 34455556778899999999887775 67899999987542 11111 223568
Q ss_pred EEEEECCCCCEEEEeeCCCeEEEeeCCC----------cEEEEEeeecccCe-----EEEEEccCCcEEEEec---CCce
Q 021319 195 YCIAIDPMGRYFAVGSADSLVSLWDISE----------MLCVRTFTKLEWPV-----RTISFSHTGDYIASAS---EDLF 256 (314)
Q Consensus 195 ~~i~~~~~~~~l~t~~~dg~i~vwd~~~----------~~~~~~~~~~~~~v-----~~~~~sp~~~~l~s~s---~d~~ 256 (314)
..++|+|+|...++.-.|++|.+||+.+ ...+.++..+-.+- ..+.++|||++|+++. .|..
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 9999999995566778899999999976 55666665443321 1234689999999884 4553
Q ss_pred E----------EEEECCCCC
Q 021319 257 I----------DISNVHTGR 266 (314)
Q Consensus 257 v----------~v~~~~~~~ 266 (314)
+ .++|+..++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSS
T ss_pred ccCCCCCCCcceEEEcCCCc
Confidence 2 778886544
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.18 E-value=1.4e-08 Score=81.15 Aligned_cols=188 Identities=15% Similarity=0.184 Sum_probs=130.1
Q ss_pred eeeEEecCce--EEEEEccCCCEEEEEeCCC--cEEEEEccCCeEeeeeccCcceeeEEeccCCC-eEEEEcCCceEEEE
Q 021319 102 SQQAELSGEN--INITYKPDGTHIAVGNRDD--ELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE-MFFLTTGNGTVEVL 176 (314)
Q Consensus 102 ~~~~~~~~~~--~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 176 (314)
+...++.... -.+.|+ ++.+..+.+.++ .|..+|+.+.+.+.+...+.........+.++ .+++.-.++.+.++
T Consensus 34 v~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred EEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 3444444444 346676 666666666665 79999999999888877665543333333444 44555568999999
Q ss_pred eCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc-----cCeEEEEEccCCcEEEEe
Q 021319 177 TYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE-----WPVRTISFSHTGDYIASA 251 (314)
Q Consensus 177 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~-----~~v~~~~~sp~~~~l~s~ 251 (314)
|..+.+.+.++.... .-..++ ++++.|+.++.++.|.++|..+.+.+.++.... ..++.+.|. +|+..|..
T Consensus 113 D~~t~~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~ 188 (262)
T 3nol_A 113 NIRNLRQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANV 188 (262)
T ss_dssp ETTTCCEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred ECccCcEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEE
Confidence 999988887775322 223333 567777777667889999999988887765421 234567776 78777666
Q ss_pred cCCceEEEEECCCCCeEEEEecc-------------CccceeEEcCCCCeeEEEec
Q 021319 252 SEDLFIDISNVHTGRTVHQIPCR-------------AAMNSVEWNPKYNLLAYAGD 294 (314)
Q Consensus 252 s~d~~v~v~~~~~~~~~~~~~~~-------------~~i~~v~~~~~~~~la~~~~ 294 (314)
-.+..|.+.|..+|+.+..+... ...+.+||+|+.+.|..+|.
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 67889999999999999888642 13489999998776666663
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.15 E-value=2.4e-08 Score=79.80 Aligned_cols=181 Identities=13% Similarity=0.097 Sum_probs=131.9
Q ss_pred EEEEEEcCCCCCEEEEEeCCC--cEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEe-CCCcEEEEEccCCeEeee
Q 021319 69 VDQLCWDPKHADLIATASGDK--TVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN-RDDELTILDVRKFKPIHR 145 (314)
Q Consensus 69 v~~l~~~~~~~~~l~s~~~D~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~ 145 (314)
...|.|+ + +.+..|.+.+| +|+++|+.+++......+..........+++..|.... .++.+.++|..+.+.+.+
T Consensus 45 tqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4778887 3 46777877765 99999999999988887766654433344555665554 578899999999998888
Q ss_pred eccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeec--c---cceEEEEECCCCCEEEEeeCCCeEEEeeC
Q 021319 146 RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAH--T---AGCYCIAIDPMGRYFAVGSADSLVSLWDI 220 (314)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~i~~i~~~~~~~~l~t~~~dg~i~vwd~ 220 (314)
+..+.+-..+ .+++..++.+.+++++.++|..+.+.+..+... . ..++.+.+. +|+..|..-.+..|.+.|.
T Consensus 123 i~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 123 FNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp EECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECT
T ss_pred EECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEEC
Confidence 7765443344 467788888888899999998888776665432 1 234566766 6777776667889999999
Q ss_pred CCcEEEEEeeec------------ccCeEEEEEccCCcEEEEecCC
Q 021319 221 SEMLCVRTFTKL------------EWPVRTISFSHTGDYIASASED 254 (314)
Q Consensus 221 ~~~~~~~~~~~~------------~~~v~~~~~sp~~~~l~s~s~d 254 (314)
.+++.+..+... ..-.+.|||+|+++.|+..++.
T Consensus 200 ~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 200 ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 999988776531 1235789999998777766654
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.14 E-value=2.6e-08 Score=85.38 Aligned_cols=252 Identities=12% Similarity=0.120 Sum_probs=154.4
Q ss_pred CCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCc
Q 021319 31 TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGE 110 (314)
Q Consensus 31 ~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~ 110 (314)
++..+..++.++.|..+|.+++. ......+.+.. ....... +..++.++.++.+..+|..+|+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~--~~W~~~~~~~~--~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGT--VAWQTKVAGEA--LSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCC--EEEEEECSSCC--CSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--EEEEEeCCCce--EcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC
Confidence 35577778889999999987543 22222222111 1111121 24677888999999999999987765554332
Q ss_pred eE------EEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcce-----e---eEEec--cCCCeEEEEcCCceEE
Q 021319 111 NI------NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEV-----N---EIAWN--MTGEMFFLTTGNGTVE 174 (314)
Q Consensus 111 ~~------~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----~---~~~~~--~~~~~~~~~~~~g~~~ 174 (314)
.. .... .+..++++..++.+..+|.++.+.+.......+. . .+... ..+..++++..++.+.
T Consensus 175 ~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 175 SLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLT 252 (376)
T ss_dssp ----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEE
T ss_pred ceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEE
Confidence 21 1111 2456788888999999999988877655432110 0 00001 1246677777889999
Q ss_pred EEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeeccc-CeEEEEEccCCcEEEEecC
Q 021319 175 VLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEW-PVRTISFSHTGDYIASASE 253 (314)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~s~s~ 253 (314)
.++..+.+.+.... ......+.. ++..+..++.++.+..+|..+++.+-....... ....... .+..|+.++.
T Consensus 253 ~~d~~tG~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~ 326 (376)
T 3q7m_A 253 ALDLRSGQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDS 326 (376)
T ss_dssp EEETTTCCEEEEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECT
T ss_pred EEECCCCcEEeecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeC
Confidence 99987776554432 122334444 356777788899999999999987655542211 1121222 3577888999
Q ss_pred CceEEEEECCCCCeEEEEec-cCccce-eEEcCCCCeeEEEecCCccc
Q 021319 254 DLFIDISNVHTGRTVHQIPC-RAAMNS-VEWNPKYNLLAYAGDDKNKY 299 (314)
Q Consensus 254 d~~v~v~~~~~~~~~~~~~~-~~~i~~-v~~~~~~~~la~~~~d~~~~ 299 (314)
++.+.++|..+|+.+..... ...+.+ ... . +..|..++.++.+|
T Consensus 327 ~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~-~~~l~v~~~~G~l~ 372 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQQKVDSSGFQTEPVA-A-DGKLLIQAKDGTVY 372 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCTTCBCSCCEE-E-TTEEEEEBTTSCEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCcceeCCEE-E-CCEEEEEeCCCEEE
Confidence 99999999999999887764 333332 222 2 34555677665544
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.10 E-value=4.8e-11 Score=102.34 Aligned_cols=177 Identities=11% Similarity=0.003 Sum_probs=97.2
Q ss_pred CCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccc-eE-E
Q 021319 119 DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAG-CY-C 196 (314)
Q Consensus 119 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-i~-~ 196 (314)
++..+++++.|+.+..||..+.+.+.+.+. ..+.+.....++..+++++.++.++.|+..+.+.+..+..+... +. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 577899999999999999999988877665 34444334456667777789999999998766654443322111 10 0
Q ss_pred EEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCc
Q 021319 197 IAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAA 276 (314)
Q Consensus 197 i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~ 276 (314)
..+. .+..+++++.++.+..||..+++.+.++..+. ...++|++..+++++.|+.+..||..+|+.+..+....
T Consensus 87 p~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 87 PCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred ceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 0111 34567788889999999999998876665433 24567899999999999999999999999887764321
Q ss_pred cceeEEcCCC---CeeEEEecCCcccccc
Q 021319 277 MNSVEWNPKY---NLLAYAGDDKNKYQAD 302 (314)
Q Consensus 277 i~~v~~~~~~---~~la~~~~d~~~~~~~ 302 (314)
....++.++. ..+..++.|+..+-++
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEETSCEEEEEC
T ss_pred ccCccccCCccccceEEEECCCCEEEEEE
Confidence 2333344432 4555677776555433
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.08 E-value=2e-07 Score=79.85 Aligned_cols=254 Identities=9% Similarity=0.022 Sum_probs=154.3
Q ss_pred CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecC-------CCCEE-EEEEcCCCCCEEEEEeCCCcEEEEeCCCCceee
Q 021319 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGH-------ADSVD-QLCWDPKHADLIATASGDKTVRLWDARSGKCSQ 103 (314)
Q Consensus 32 g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h-------~~~v~-~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~ 103 (314)
+..+..++.++.|..+|.+++. ......+... ...+. .... . ...++.++.++.|..+|..+|+..-
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~v~v~~~~g~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGK--EIWSVSLAEKDGWFSKEPALLSGGVTV--S-GGHVYIGSEKAQVYALNTSDGTVAW 127 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCC--EEEEEECCC---CCSCCCCCEEEEEEE--E-TTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCc--eeeeecCccccccccccCcccccCceE--e-CCEEEEEcCCCEEEEEECCCCCEEE
Confidence 5678888888999999987543 2222232211 12232 2222 2 2467788899999999999998776
Q ss_pred eEEecCceEE-EEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCccee------eEEeccCCCeEEEEcCCceEEEE
Q 021319 104 QAELSGENIN-ITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVN------EIAWNMTGEMFFLTTGNGTVEVL 176 (314)
Q Consensus 104 ~~~~~~~~~~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~ 176 (314)
.......... ... .+..+++++.++.+..+|.++.+.+.......... ... ..+..++++..++.+..+
T Consensus 128 ~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~--~~~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 128 QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPT--TAFGAAVVGGDNGRVSAV 203 (376)
T ss_dssp EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCE--EETTEEEECCTTTEEEEE
T ss_pred EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcE--EECCEEEEEcCCCEEEEE
Confidence 5554433221 111 24578888899999999999888776655432221 111 124567777888999999
Q ss_pred eCCCCCceeeeeeccc-c---eEE---EEECC--CCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcE
Q 021319 177 TYPSLRPLDTVVAHTA-G---CYC---IAIDP--MGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDY 247 (314)
Q Consensus 177 ~~~~~~~~~~~~~~~~-~---i~~---i~~~~--~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 247 (314)
+..+.+.+........ . +.. +...| .+..+..++.++.+..+|..+++.+..... .....+. .++..
T Consensus 204 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~--~~~~~ 279 (376)
T 3q7m_A 204 LMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFI--VDGNR 279 (376)
T ss_dssp ETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEE--EETTE
T ss_pred ECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCce--EECCE
Confidence 9877765544332110 0 000 00111 245667777899999999999887655432 1233333 34677
Q ss_pred EEEecCCceEEEEECCCCCeEEEEec-c-CccceeEEcCCCCeeEEEecCCcccc
Q 021319 248 IASASEDLFIDISNVHTGRTVHQIPC-R-AAMNSVEWNPKYNLLAYAGDDKNKYQ 300 (314)
Q Consensus 248 l~s~s~d~~v~v~~~~~~~~~~~~~~-~-~~i~~v~~~~~~~~la~~~~d~~~~~ 300 (314)
|..++.++.+..+|..+|+.+..... . ....+.... +..|..++.++.++-
T Consensus 280 l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~ 332 (376)
T 3q7m_A 280 IYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHW 332 (376)
T ss_dssp EEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEE
Confidence 88888899999999999998877652 1 123333332 345556666655443
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.07 E-value=2.7e-07 Score=73.08 Aligned_cols=183 Identities=14% Similarity=0.135 Sum_probs=130.9
Q ss_pred CCEEEEEEcCCCCCEEEEEeCC--CcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEE-EEeCCCcEEEEEccCCeEe
Q 021319 67 DSVDQLCWDPKHADLIATASGD--KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDELTILDVRKFKPI 143 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D--~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~ 143 (314)
.-...|.|++ +.+..|.+.+ ++|+.+|+.+++......+..........+.+..|. +.-.++.+.++|..+.+.+
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3467899986 4566777775 499999999999988887766554433333455555 4456788999999999999
Q ss_pred eeeccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecc-----cceEEEEECCCCCEEEEeeCCCeEEEe
Q 021319 144 HRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-----AGCYCIAIDPMGRYFAVGSADSLVSLW 218 (314)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~i~~i~~~~~~~~l~t~~~dg~i~vw 218 (314)
.++..+..-..+ .+++..++++..++.+.++|..+.+.+..+.... ..++.+.+. +|+..|..-.+..|.+.
T Consensus 99 ~ti~~~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 99 ARFRYPGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EEEECSSCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEE
Confidence 888766544444 4567888888889999999988887766654321 234566655 67766666567799999
Q ss_pred eCCCcEEEEEeeec-------------ccCeEEEEEccCCcEEEEecCC
Q 021319 219 DISEMLCVRTFTKL-------------EWPVRTISFSHTGDYIASASED 254 (314)
Q Consensus 219 d~~~~~~~~~~~~~-------------~~~v~~~~~sp~~~~l~s~s~d 254 (314)
|..+++.+..+.-. ..-.+.||++|+++.|+..++-
T Consensus 176 Dp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 176 DPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp CTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred ECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 99999988776521 1245789999987766655543
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.05 E-value=9.5e-08 Score=76.35 Aligned_cols=175 Identities=11% Similarity=0.085 Sum_probs=124.0
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccC-CCeEEEEcCCceEEEEeCCCCCceeeeeecc
Q 021319 113 NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMT-GEMFFLTTGNGTVEVLTYPSLRPLDTVVAHT 191 (314)
Q Consensus 113 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 191 (314)
.+.|. ++.+.++.+.++.|.++|+++.+.+... .+.........+. +..+++.-.++.+.+||..+.+.+.++...
T Consensus 59 GL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~- 135 (268)
T 3nok_A 59 GLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS- 135 (268)
T ss_dssp EEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-
T ss_pred eEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-
Confidence 45565 4556667777888999999998887776 5544333222333 355566667899999999998888777532
Q ss_pred cceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc-----cCeEEEEEccCCcEEEEecCCceEEEEECCCCC
Q 021319 192 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE-----WPVRTISFSHTGDYIASASEDLFIDISNVHTGR 266 (314)
Q Consensus 192 ~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~-----~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~ 266 (314)
..-..++ ++++.|+.+..++.|.++|..+.+.+.++.... ..++.+.|. +|+..|..-.+..|.+.|..+|+
T Consensus 136 ~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 136 GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 2223444 567787777778899999999998887765422 134667776 78777666678899999999999
Q ss_pred eEEEEecc--------------CccceeEEcCCCCeeEEEe
Q 021319 267 TVHQIPCR--------------AAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 267 ~~~~~~~~--------------~~i~~v~~~~~~~~la~~~ 293 (314)
.+..+... ...|.|||+|+++.|..+|
T Consensus 213 V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 213 VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99888642 2458999999765554444
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.03 E-value=2.6e-07 Score=73.18 Aligned_cols=176 Identities=12% Similarity=0.120 Sum_probs=122.4
Q ss_pred EEEEccCCCEEEEEeCC--CcEEEEEccCCeEeeeeccCcceeeEEeccC-CCeEEEEcCCceEEEEeCCCCCceeeeee
Q 021319 113 NITYKPDGTHIAVGNRD--DELTILDVRKFKPIHRRKFGYEVNEIAWNMT-GEMFFLTTGNGTVEVLTYPSLRPLDTVVA 189 (314)
Q Consensus 113 ~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 189 (314)
.+.|.. +.+..+.+.+ +.|..+|+.+.+.+.+...+.........+. +..+++.-.++.+.+++..+.+.+.++..
T Consensus 25 GL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~ 103 (243)
T 3mbr_X 25 GLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRY 103 (243)
T ss_dssp EEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEEC
T ss_pred cEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeC
Confidence 466765 4455555554 4799999999998887766544433322333 44555566789999999999888877653
Q ss_pred cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc-----cCeEEEEEccCCcEEEEecCCceEEEEECCC
Q 021319 190 HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE-----WPVRTISFSHTGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 190 ~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~-----~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~ 264 (314)
- ..-..++ +++..|+++..++.|.++|..+.+.+.+++... ..++.+.+. +|+..|..-.+..|.+.|..+
T Consensus 104 ~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 104 P-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp S-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred C-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 2 2334444 456666666678899999999998887765432 235566664 777666665678999999999
Q ss_pred CCeEEEEecc--------------CccceeEEcCCCCeeEEEe
Q 021319 265 GRTVHQIPCR--------------AAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 265 ~~~~~~~~~~--------------~~i~~v~~~~~~~~la~~~ 293 (314)
|+.+..+... ...|.+||+|++..|..+|
T Consensus 180 G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 180 GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 9999887632 1358999999766665555
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.02 E-value=1.3e-07 Score=75.54 Aligned_cols=179 Identities=11% Similarity=0.009 Sum_probs=129.8
Q ss_pred EEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEE-EEeCCCcEEEEEccCCeEeeeec
Q 021319 69 VDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIA-VGNRDDELTILDVRKFKPIHRRK 147 (314)
Q Consensus 69 v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~ 147 (314)
...|.|+. +.+..+.+.++.|+++|+.+++..... +..........+++..|. +.-.++.+.++|..+.+.+.++.
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 46788873 567888999999999999999988877 666554422333444444 45567889999999999988877
Q ss_pred cCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeee--ccc---ceEEEEECCCCCEEEEeeCCCeEEEeeCCC
Q 021319 148 FGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA--HTA---GCYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (314)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~---~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~ 222 (314)
...+-..++ +++..++.+..++++.++|..+.+.+..+.. +.. .++.+.+. +|+..|..-.+..|.+.|..+
T Consensus 134 ~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 134 YSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp CSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTT
T ss_pred CCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 655444444 5678888888899999999888877666543 222 34666766 777666666788999999999
Q ss_pred cEEEEEeeec-------------ccCeEEEEEccCCcEEEEecC
Q 021319 223 MLCVRTFTKL-------------EWPVRTISFSHTGDYIASASE 253 (314)
Q Consensus 223 ~~~~~~~~~~-------------~~~v~~~~~sp~~~~l~s~s~ 253 (314)
++.+..+.-. ..-.+.||++|+++.|+..++
T Consensus 211 G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 211 GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 9988776421 124578999998765555444
No 246
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.98 E-value=3.2e-07 Score=84.59 Aligned_cols=268 Identities=10% Similarity=0.055 Sum_probs=149.9
Q ss_pred EEEECC-CCCEEEEeeCCC-----------cEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEe-CCCcE
Q 021319 25 SVAWNC-TGTKLASGSVDQ-----------TARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATAS-GDKTV 91 (314)
Q Consensus 25 ~v~~s~-~g~~l~s~~~D~-----------~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~D~~v 91 (314)
.+++.+ +++.++.||.+. .+.+||..+.......... ..+.....++++.++ +.+++.|+ .+..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~-~~~~~~~~~~~~~~~-g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV-TKHDMFCPGISMDGN-GQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE-CSCCCSSCEEEECTT-SCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC-CCCCCccccccCCCC-CCEEEeCCCCCCce
Confidence 445566 888888887643 5778888765433322221 112233334555555 46777887 45689
Q ss_pred EEEeCCCCceeeeEEecCc--eEEEEEccCCCEEEEEe-CC-----CcEEEEEccCCeEeeeec-----cCcceeeEEec
Q 021319 92 RLWDARSGKCSQQAELSGE--NINITYKPDGTHIAVGN-RD-----DELTILDVRKFKPIHRRK-----FGYEVNEIAWN 158 (314)
Q Consensus 92 ~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~~~-----~~~~~~~~~~~ 158 (314)
.+||..+++......+... ...++..++++.++.|+ .+ ..+.+||+.+.+...... .........+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 9999987765443322211 22455667999999988 34 468999998765433210 00000011122
Q ss_pred cCCCeEEEEcCCc---------eEEEEeCCCCCceeeeeeccc---------ceEEEEEC-CCCCEEEEeeCCC------
Q 021319 159 MTGEMFFLTTGNG---------TVEVLTYPSLRPLDTVVAHTA---------GCYCIAID-PMGRYFAVGSADS------ 213 (314)
Q Consensus 159 ~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~~~~~~~---------~i~~i~~~-~~~~~l~t~~~dg------ 213 (314)
.++..++++..+| .+..|+............+.. .-.++.+. .++++++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 4455566665444 345566544332211111111 12344443 4788888888643
Q ss_pred -----eEEEeeCCCcEEEEEe--e-ecccCeEEEEEccCCcEEEEecCC-----------ceEEEEECCCCCeEEEEe--
Q 021319 214 -----LVSLWDISEMLCVRTF--T-KLEWPVRTISFSHTGDYIASASED-----------LFIDISNVHTGRTVHQIP-- 272 (314)
Q Consensus 214 -----~i~vwd~~~~~~~~~~--~-~~~~~v~~~~~sp~~~~l~s~s~d-----------~~v~v~~~~~~~~~~~~~-- 272 (314)
.|.+||..+....... . .....-.+....|++++++.|+.+ ..+.+||..+.+=. .+.
T Consensus 428 ~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~-~~~~~ 506 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFY-KQNPN 506 (656)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEE-ECCCC
T ss_pred CCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCcee-ecCCC
Confidence 6889998766543322 1 111112344566899999999865 45789998764321 121
Q ss_pred -c-cCccceeEEcCCCCeeEEEecC
Q 021319 273 -C-RAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 273 -~-~~~i~~v~~~~~~~~la~~~~d 295 (314)
. +..-.++.+.|++++++.||..
T Consensus 507 ~~~R~~hs~a~ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 507 SIVRVYHSISLLLPDGRVFNGGGGL 531 (656)
T ss_dssp SSCCCTTEEEEECTTSCEEEEECCC
T ss_pred CCccccccHhhcCCCcEEEecCCCC
Confidence 1 1222345667999999999853
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=2.3e-06 Score=71.53 Aligned_cols=240 Identities=10% Similarity=-0.008 Sum_probs=145.7
Q ss_pred ecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEee------------------cCCCCEEEEEEcCCC
Q 021319 17 TGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------------------GHADSVDQLCWDPKH 78 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~------------------~h~~~v~~l~~~~~~ 78 (314)
.+.-....+++|+++|+++.++..++.|..|+.+.. ........ .....+..+++.+.+
T Consensus 15 ~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 15 EAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNS---GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp ECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTT---CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred CCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCC---ceEEEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 343345678889999997888888899998876532 12211110 011347889998733
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeeEE-ec----CceEEEEEcc-CCCEEEEEeC-----------------CCcEEEE
Q 021319 79 ADLIATASGDKTVRLWDARSGKCSQQAE-LS----GENINITYKP-DGTHIAVGNR-----------------DDELTIL 135 (314)
Q Consensus 79 ~~~l~s~~~D~~v~iwd~~~~~~~~~~~-~~----~~~~~~~~~~-~~~~l~~~~~-----------------d~~i~i~ 135 (314)
++++ .+...+.+..+|..++....... .. .....+++.+ +|+..++... ++.+..+
T Consensus 92 g~l~-v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 92 NQLY-IVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TEEE-EEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred CcEE-EEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 4444 45455568889877654322111 11 2245688899 8876665432 2568888
Q ss_pred EccCCeEeeeeccCcceeeEEeccCCCeEEEE-cCCceEEEEeCCCCC--ceeeeeecccceEEEEECCCCCEEEEeeC-
Q 021319 136 DVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT-TGNGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSA- 211 (314)
Q Consensus 136 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~t~~~- 211 (314)
|....+.............++++++++.++++ ...+.|..++..... ....+....+ +..++++++|++.++...
T Consensus 171 d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 171 DPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp ETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEE
T ss_pred eCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCc
Confidence 87655432222222345678999999855555 667899999876421 1122222223 788999999987666544
Q ss_pred ---------CCeEEEeeCCCcEEEEEeeecc----cCeEEEEEccCCcEEEEecCCceEEEEECC
Q 021319 212 ---------DSLVSLWDISEMLCVRTFTKLE----WPVRTISFSHTGDYIASASEDLFIDISNVH 263 (314)
Q Consensus 212 ---------dg~i~vwd~~~~~~~~~~~~~~----~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~ 263 (314)
.+.|..+|.. ++.+..+.... ..+..+++ .++++.++......|.+++..
T Consensus 250 ~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred ccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 4678888864 66665554332 23555666 567766666677788888764
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.97 E-value=2.5e-06 Score=69.27 Aligned_cols=219 Identities=9% Similarity=0.034 Sum_probs=137.2
Q ss_pred ccEEEEEECCCCCEEE-EeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 21 KKVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~-s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
..+..++|++++..|. +-..++.|..++.+... .. ..+.........+++++.++.+.++-...+.|.+++....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~-~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE---PT-TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC---CE-EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCC---cE-EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 4577999999765544 55567889999876422 11 1122223467889999876666677777889999998654
Q ss_pred ceeeeEEec-CceEEEEEccCCCEEEEEeC---CCcEEEEEccCCe--EeeeeccCcceeeEEeccCCCeE-EEEcCCce
Q 021319 100 KCSQQAELS-GENINITYKPDGTHIAVGNR---DDELTILDVRKFK--PIHRRKFGYEVNEIAWNMTGEMF-FLTTGNGT 172 (314)
Q Consensus 100 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~ 172 (314)
......... .....+++.|++..|+++.. .+.|..+++.... .+.. ........+++++++..+ ++-...+.
T Consensus 112 ~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~-~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ-DNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC-TTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE-CCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 322222212 35677899997666665554 3578777765322 1111 112346788999976554 55556789
Q ss_pred EEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeeccc-CeEEEEEccCCc
Q 021319 173 VEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEW-PVRTISFSHTGD 246 (314)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~-~v~~~~~sp~~~ 246 (314)
+..++........... ....+..++++ .+.++++...++.|..+|..+++.+.++..... ....+++.|++.
T Consensus 191 I~~~~~~g~~~~~~~~-~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 191 AECLNPAQPGRRKVLE-GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTEEEEEEEEE-CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEecCCCceEEEec-CCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9999876433222222 22345677765 344455555668999999999988887754332 356678888764
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.96 E-value=1e-06 Score=79.73 Aligned_cols=256 Identities=10% Similarity=0.041 Sum_probs=155.5
Q ss_pred CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCC--CEEE-EEEcCCCCCEEEEEeC------CCcEEEEeCCCCcee
Q 021319 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD--SVDQ-LCWDPKHADLIATASG------DKTVRLWDARSGKCS 102 (314)
Q Consensus 32 g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~--~v~~-l~~~~~~~~~l~s~~~------D~~v~iwd~~~~~~~ 102 (314)
+..++.++.|+.|..+|..++. .+....+..+.. .+.. ... .++ .++.++. ++.|..+|..+|+..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~--~~W~~~~~~~~~~~~~~~~P~v--~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGK--INWEVEVCDPKVGSTLTQAPFV--AKD-TVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCC--EEEEEECCCGGGTCBCCSCCEE--ETT-EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCEEEEEeCCCEEEEEECCCCC--EEEEecCCCCCccceeccCCEE--ECC-EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 4567777789999999887643 223333322211 1111 011 123 4444443 799999999999876
Q ss_pred eeEEecCce---------------------------------------EEEEEccCCCEEEEEeCC--------------
Q 021319 103 QQAELSGEN---------------------------------------INITYKPDGTHIAVGNRD-------------- 129 (314)
Q Consensus 103 ~~~~~~~~~---------------------------------------~~~~~~~~~~~l~~~~~d-------------- 129 (314)
-........ ..+++.++...++.+..+
T Consensus 190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~ 269 (571)
T 2ad6_A 190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK 269 (571)
T ss_dssp EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence 554432211 124566777777777642
Q ss_pred --CcEEEEEccCCeEeeeeccCc----------ceeeEEeccCCC---eEEEEcCCceEEEEeCCCCCceeeeeecc---
Q 021319 130 --DELTILDVRKFKPIHRRKFGY----------EVNEIAWNMTGE---MFFLTTGNGTVEVLTYPSLRPLDTVVAHT--- 191 (314)
Q Consensus 130 --~~i~i~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--- 191 (314)
+.+..+|.++.+.+...+... ...-+....+++ .++.+..+|.+.+++..+.+.+.......
T Consensus 270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence 258999999988877655321 111111223553 56677888999999987766554332110
Q ss_pred ----------cce--------------------------EEEEECCCCCEEEEee-------------------------
Q 021319 192 ----------AGC--------------------------YCIAIDPMGRYFAVGS------------------------- 210 (314)
Q Consensus 192 ----------~~i--------------------------~~i~~~~~~~~l~t~~------------------------- 210 (314)
.++ ..++++|+..++++..
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 000 2357888777666543
Q ss_pred ------------CCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCccc
Q 021319 211 ------------ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAMN 278 (314)
Q Consensus 211 ------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i~ 278 (314)
.+|.+..||..+++.+-++... .++....+...+..++.++.|+.++++|..+|+.+.++.....+.
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~ 508 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGI 508 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcE
Confidence 3578999999999877665432 222222233456677779999999999999999999887654432
Q ss_pred --eeEEcCCCCeeEEEe
Q 021319 279 --SVEWNPKYNLLAYAG 293 (314)
Q Consensus 279 --~v~~~~~~~~la~~~ 293 (314)
-+.+.++++.++...
T Consensus 509 ~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 509 GSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp SCCEEEEETTEEEEEEE
T ss_pred eeeEEEEECCEEEEEEE
Confidence 345557777654433
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.94 E-value=5.2e-07 Score=83.24 Aligned_cols=263 Identities=12% Similarity=0.071 Sum_probs=161.3
Q ss_pred CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCC--------CCE-EEEEEcCCCCCEEEEEeCCCcEEEEeCCCCcee
Q 021319 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA--------DSV-DQLCWDPKHADLIATASGDKTVRLWDARSGKCS 102 (314)
Q Consensus 32 g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~--------~~v-~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~ 102 (314)
+..+..++.++.|.-+|.+++.. +......... ..+ ..++.. +..++.++.|+.|..+|..+|+..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKE--LWRYDPEVAKVKARTSCCDAVNRGVALW---GDKVYVGTLDGRLIALDAKTGKAI 140 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCE--EEEECCCCCGGGGGGCTTCSCCCCCEEE---BTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEECCCCeEEEEECCCChh--ceEECCCCCccccccccccCCccceEEE---CCEEEEEcCCCEEEEEECCCCCEe
Confidence 45666677788888888765432 2222211100 001 112222 246778889999999999999877
Q ss_pred eeEEecCc--eEEEEEcc--CCCEEEEEeC------CCcEEEEEccCCeEeeeeccC--cc-------------------
Q 021319 103 QQAELSGE--NINITYKP--DGTHIAVGNR------DDELTILDVRKFKPIHRRKFG--YE------------------- 151 (314)
Q Consensus 103 ~~~~~~~~--~~~~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~--~~------------------- 151 (314)
-....... ...+...| .+..++++.. ++.+..+|.++.+.+.+.... .+
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred eeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 65544211 00000011 1335555543 578999999998887665421 00
Q ss_pred -----------eeeEEeccCCCeEEEEcCCce-------------------EEEEeCCCCCceeeeee--cc-------c
Q 021319 152 -----------VNEIAWNMTGEMFFLTTGNGT-------------------VEVLTYPSLRPLDTVVA--HT-------A 192 (314)
Q Consensus 152 -----------~~~~~~~~~~~~~~~~~~~g~-------------------~~~~~~~~~~~~~~~~~--~~-------~ 192 (314)
....++.+....++++..++. +..++..+.+.+-.+.. |. .
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~ 300 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQ 300 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCC
Confidence 013566777778888877663 88888888776655542 21 2
Q ss_pred ceEEEEECCCCC---EEEEeeCCCeEEEeeCCCcEEEEEeeecc--c----------C----------------------
Q 021319 193 GCYCIAIDPMGR---YFAVGSADSLVSLWDISEMLCVRTFTKLE--W----------P---------------------- 235 (314)
Q Consensus 193 ~i~~i~~~~~~~---~l~t~~~dg~i~vwd~~~~~~~~~~~~~~--~----------~---------------------- 235 (314)
++....+..+|+ .++.++.+|.+.++|..+++.+...+... + +
T Consensus 301 ~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~ 380 (668)
T 1kv9_A 301 QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA 380 (668)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred CcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccc
Confidence 222233333565 68899999999999999998774332111 0 0
Q ss_pred --eEEEEEccCCcEEEEe------------------------------------cCCceEEEEECCCCCeEEEEeccCcc
Q 021319 236 --VRTISFSHTGDYIASA------------------------------------SEDLFIDISNVHTGRTVHQIPCRAAM 277 (314)
Q Consensus 236 --v~~~~~sp~~~~l~s~------------------------------------s~d~~v~v~~~~~~~~~~~~~~~~~i 277 (314)
...++++|+..++... ..++.|..||..+|+.+.+.+.....
T Consensus 381 ~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~ 460 (668)
T 1kv9_A 381 HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHW 460 (668)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSC
T ss_pred cCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCC
Confidence 0125778876665531 23488999999999999888776666
Q ss_pred ceeEEcCCCCeeEEEecCCccc
Q 021319 278 NSVEWNPKYNLLAYAGDDKNKY 299 (314)
Q Consensus 278 ~~v~~~~~~~~la~~~~d~~~~ 299 (314)
....+...+.++++++.|+.++
T Consensus 461 ~~~~~~t~gg~vf~g~~dg~l~ 482 (668)
T 1kv9_A 461 NGGTLSTAGNLVFQGTAAGQMH 482 (668)
T ss_dssp CCCEEEETTTEEEEECTTSEEE
T ss_pred cCceeEeCCCEEEEECCcccch
Confidence 6666777788888887665433
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.91 E-value=1.5e-06 Score=80.24 Aligned_cols=256 Identities=12% Similarity=0.128 Sum_probs=157.3
Q ss_pred CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCC--CCEEE-EEEcCCCCCEEEEEeC------CCcEEEEeCCCCcee
Q 021319 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHA--DSVDQ-LCWDPKHADLIATASG------DKTVRLWDARSGKCS 102 (314)
Q Consensus 32 g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~--~~v~~-l~~~~~~~~~l~s~~~------D~~v~iwd~~~~~~~ 102 (314)
+..++.++.|+.|..+|.+++. .+......... ..+.. ... .++ .++.+.. ++.|..+|..+|+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~--~~W~~~~~~~~~~~~~~~~P~v--~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGK--AIWSQQTTDPAKPYSITGAPRV--VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCC--EEEEEECSCTTSSCBCCSCCEE--ETT-EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCEEEEEECCCCC--EeeeeccCCCCCcceecCCCEE--ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 4567788889999999987643 22222221110 01110 011 122 4444432 589999999999876
Q ss_pred eeEEecC---c----------------------------e-EEEEEccCCCEEEEEeCCC-------------------c
Q 021319 103 QQAELSG---E----------------------------N-INITYKPDGTHIAVGNRDD-------------------E 131 (314)
Q Consensus 103 ~~~~~~~---~----------------------------~-~~~~~~~~~~~l~~~~~d~-------------------~ 131 (314)
-...... . . ..+++.|+...++++..++ .
T Consensus 192 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~ 271 (668)
T 1kv9_A 192 WRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSS 271 (668)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 5553210 0 0 1257888888998887765 3
Q ss_pred EEEEEccCCeEeeeeccC----------cceeeEEeccCCC---eEEEEcCCceEEEEeCCCCCceeeeeecc-------
Q 021319 132 LTILDVRKFKPIHRRKFG----------YEVNEIAWNMTGE---MFFLTTGNGTVEVLTYPSLRPLDTVVAHT------- 191 (314)
Q Consensus 132 i~i~d~~~~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------- 191 (314)
|..+|+++.+.+...+.. .+........+++ .++++..+|.+++++..+.+.+.......
T Consensus 272 v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 351 (668)
T 1kv9_A 272 ILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKV 351 (668)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEE
T ss_pred EEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccc
Confidence 999999999888766542 1111112223454 57777889999999887776552211100
Q ss_pred ----cc-------------------------eEEEEECCCCCEEEEe---------------------------------
Q 021319 192 ----AG-------------------------CYCIAIDPMGRYFAVG--------------------------------- 209 (314)
Q Consensus 192 ----~~-------------------------i~~i~~~~~~~~l~t~--------------------------------- 209 (314)
.. -..++++|+...+...
T Consensus 352 d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 431 (668)
T 1kv9_A 352 DLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDV 431 (668)
T ss_dssp CTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCC
T ss_pred ccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCC
Confidence 00 0126777776655431
Q ss_pred ---eCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCcc--ceeEEcC
Q 021319 210 ---SADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM--NSVEWNP 284 (314)
Q Consensus 210 ---~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i--~~v~~~~ 284 (314)
..+|.|..||+.+++.+-+.... .+.....+...+.+++.++.|+.++++|..+|+.+..+.....+ .-+.+..
T Consensus 432 p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~ 510 (668)
T 1kv9_A 432 PAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL 510 (668)
T ss_dssp CGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEE
Confidence 12488999999999887665433 23333445567888999999999999999999999888754433 2344555
Q ss_pred CCC-eeEEEe
Q 021319 285 KYN-LLAYAG 293 (314)
Q Consensus 285 ~~~-~la~~~ 293 (314)
+++ +++.++
T Consensus 511 ~G~~yva~~~ 520 (668)
T 1kv9_A 511 AGRQYVAIMA 520 (668)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 665 444444
No 252
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.90 E-value=2.6e-06 Score=77.04 Aligned_cols=265 Identities=15% Similarity=0.072 Sum_probs=157.2
Q ss_pred CCEEEEeeC-CCcEEEeec-CCCCCCceeeEEeecCCC--------CE-EEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 021319 32 GTKLASGSV-DQTARVWHI-EPHGHGKVKDIELRGHAD--------SV-DQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (314)
Q Consensus 32 g~~l~s~~~-D~~v~iw~~-~~~~~~~~~~~~~~~h~~--------~v-~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~ 100 (314)
+..+..++. ++.|.-+|. +++. .+....+..... .+ ..++.. +..++.++.|+.+..+|..+|+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~v~~~dg~l~alD~~tG~ 136 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGK--IVWQHKPKQDASTKAVMCCDVVDRGLAYG---AGQIVKKQANGHLLALDAKTGK 136 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS--EEEEECCCCCGGGGGGCTTCSCCCCCEEE---TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCcc--EEEEEcCCCCccccccccccccccccEEE---CCEEEEEeCCCEEEEEECCCCC
Confidence 345555555 788888887 5543 222222221100 00 112222 2467788889999999999998
Q ss_pred eeeeEEecCce--EEEEEcc--CCCEEEEEeC------CCcEEEEEccCCeEeeeeccCcce------------------
Q 021319 101 CSQQAELSGEN--INITYKP--DGTHIAVGNR------DDELTILDVRKFKPIHRRKFGYEV------------------ 152 (314)
Q Consensus 101 ~~~~~~~~~~~--~~~~~~~--~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~------------------ 152 (314)
..-........ ..+...| .+..++++.. ++.+..+|.++.+.+.+.......
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 77655443210 0011111 1345566654 789999999998887665432211
Q ss_pred ---------------------eeEEeccCCCeEEEEcCC----------------ceEEEEeCCCCCceeeeee--cc--
Q 021319 153 ---------------------NEIAWNMTGEMFFLTTGN----------------GTVEVLTYPSLRPLDTVVA--HT-- 191 (314)
Q Consensus 153 ---------------------~~~~~~~~~~~~~~~~~~----------------g~~~~~~~~~~~~~~~~~~--~~-- 191 (314)
..+++.+....++++..+ +.+..++..+.+.+-.+.. |.
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 123444555566666542 3588888877776554432 11
Q ss_pred -----cceEEEEECCCCC---EEEEeeCCCeEEEeeCCCcEEEEEeeecc-------------cCe--------------
Q 021319 192 -----AGCYCIAIDPMGR---YFAVGSADSLVSLWDISEMLCVRTFTKLE-------------WPV-------------- 236 (314)
Q Consensus 192 -----~~i~~i~~~~~~~---~l~t~~~dg~i~vwd~~~~~~~~~~~~~~-------------~~v-------------- 236 (314)
..+.-+....+|+ .++.++.+|.+.++|..+++.+..+.... .++
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 1122223334674 67788999999999999998775543211 111
Q ss_pred ------------EEEEEccCCcEEEEec-------------------------------------CCceEEEEECCCCCe
Q 021319 237 ------------RTISFSHTGDYIASAS-------------------------------------EDLFIDISNVHTGRT 267 (314)
Q Consensus 237 ------------~~~~~sp~~~~l~s~s-------------------------------------~d~~v~v~~~~~~~~ 267 (314)
..++++|+..+|+..+ .++.+..+|..+|+.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 2357888877766553 358899999999999
Q ss_pred EEEEeccCccceeEEcCCCCeeEEEecCCccccc
Q 021319 268 VHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQA 301 (314)
Q Consensus 268 ~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~ 301 (314)
+.+++....+.+......+..+..++.|+.++-+
T Consensus 457 ~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~ 490 (571)
T 2ad6_A 457 KWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKAL 490 (571)
T ss_dssp EEEEEESSCCCSBCEEETTTEEEEECTTSEEEEE
T ss_pred EEEecCCCCccceeEEECCCEEEEEcCCCeEEEE
Confidence 9888766655555444456666667777555443
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.90 E-value=5e-06 Score=69.53 Aligned_cols=227 Identities=12% Similarity=0.081 Sum_probs=136.9
Q ss_pred EEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEE--------------------ecCceEEEEEccC
Q 021319 60 IELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAE--------------------LSGENINITYKPD 119 (314)
Q Consensus 60 ~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 119 (314)
+.+.+.-.....++|+++ ++++.++..++.|..||..++....... ....+..+++.++
T Consensus 12 i~~~g~~~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~ 90 (322)
T 2fp8_A 12 ILIEAPSYAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ 90 (322)
T ss_dssp EEEECSSSCCCCEECCTT-CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred eecCCccCCceEEEEcCC-CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCC
Confidence 344444445567888886 4667778889999999987665432111 0124567888873
Q ss_pred CCEEEEEeCCCcEEEEEccCCe--Eeeeecc---CcceeeEEecc-CCCeEEEEcC-----------------CceEEEE
Q 021319 120 GTHIAVGNRDDELTILDVRKFK--PIHRRKF---GYEVNEIAWNM-TGEMFFLTTG-----------------NGTVEVL 176 (314)
Q Consensus 120 ~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~-----------------~g~~~~~ 176 (314)
...|+++...+.+..+|....+ .+..... ......++..+ ++..+++... .+.+..+
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred CCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 3445555555668888876432 1211111 12357788888 8887776543 3667777
Q ss_pred eCCCCCceeeeeecccceEEEEECCCCCEEEEe-eCCCeEEEeeCCCcE--EEEEeeecccCeEEEEEccCCcEEEEecC
Q 021319 177 TYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVG-SADSLVSLWDISEML--CVRTFTKLEWPVRTISFSHTGDYIASASE 253 (314)
Q Consensus 177 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~-~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s~s~ 253 (314)
+....+. ..+.........++++|+++.|..+ ..++.|..|++.... ....+..... ...++++++|.+.++...
T Consensus 171 d~~~~~~-~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 171 DPSTKET-TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp ETTTTEE-EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEE
T ss_pred eCCCCEE-EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecC
Confidence 6543332 2222222346789999999866555 556889999986421 1112211223 678999999987776654
Q ss_pred ----------CceEEEEECCCCCeEEEEecc-----CccceeEEcCCCCeeEE
Q 021319 254 ----------DLFIDISNVHTGRTVHQIPCR-----AAMNSVEWNPKYNLLAY 291 (314)
Q Consensus 254 ----------d~~v~v~~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~la~ 291 (314)
.+.|..++. .++.+..+... ..+.++++ .++.++++
T Consensus 249 ~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~ 299 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIG 299 (322)
T ss_dssp ETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEE
T ss_pred cccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEe
Confidence 467888886 47777766532 23566666 34554443
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=4.5e-07 Score=75.86 Aligned_cols=254 Identities=14% Similarity=0.038 Sum_probs=149.9
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
...+.++...++|...+ ++.+ |..+|.. . ........ ........... ...+..++.++.+..+|.. +
T Consensus 59 ~~~~~~~~~~~~g~l~v-~t~~--l~~~d~~-g--~~~~~~~~--~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g 126 (330)
T 3hxj_A 59 EIIECRPSIGKDGTIYF-GSDK--VYAINPD-G--TEKWRFDT--KKAIVSDFTIF---EDILYVTSMDGHLYAINTD-G 126 (330)
T ss_dssp GEEEECCEETTTTEECC-SSCE--EEEECCC-G--GGGGGSCC-------CCEEEE---TTEEEEECTTSEEEEECTT-S
T ss_pred CCcccceEEecCCcEEE-ecCc--EEEECCC-C--cEEEEEEC--CCCcccCceEE---CCEEEEEecCCEEEEEcCC-C
Confidence 34556777777775444 4433 7777642 1 11111111 11111222222 2456778889999999988 7
Q ss_pred ceeeeEEecCce-EEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccC-cceeeEEeccCCCeEEEEcCCceEEEEe
Q 021319 100 KCSQQAELSGEN-INITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG-YEVNEIAWNMTGEMFFLTTGNGTVEVLT 177 (314)
Q Consensus 100 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 177 (314)
+........... ..+...+++. +++++.++.+..+|.. .+.+...... ..+..+....++..++ ++ +.+..++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d 201 (330)
T 3hxj_A 127 TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN 201 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC
T ss_pred CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC
Confidence 655444433322 2344555665 6677788999999988 6555444332 2344455555666544 44 7788888
Q ss_pred CCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceE
Q 021319 178 YPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 257 (314)
Q Consensus 178 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v 257 (314)
...+.+.........+.++..+++|.+.+ ++.++.+..+|. ++..+..+......+..+.+.+++. |..++.++.+
T Consensus 202 -~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl 277 (330)
T 3hxj_A 202 -PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHL 277 (330)
T ss_dssp -TTSCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEE
T ss_pred -CCCcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCE
Confidence 55554444444445578888888886554 566777888885 4555555543333344455655664 5567788889
Q ss_pred EEEECCCCCeEEEEec-cCccceeEEcCCCCeeEEEecCC
Q 021319 258 DISNVHTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 296 (314)
Q Consensus 258 ~v~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~la~~~~d~ 296 (314)
..+|. +++.+..+.. ...+.++...+++.+.+ ++.++
T Consensus 278 ~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G 315 (330)
T 3hxj_A 278 YAINP-DGTEKWNFETGSWIIATPVIDENGTIYF-GTRNG 315 (330)
T ss_dssp EEECT-TSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTS
T ss_pred EEECC-CCcEEEEEEcCCccccceEEcCCCEEEE-EcCCC
Confidence 99996 7787776654 34577888877777654 66553
No 255
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.89 E-value=1.1e-07 Score=79.55 Aligned_cols=254 Identities=12% Similarity=0.020 Sum_probs=150.2
Q ss_pred EEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeE
Q 021319 26 VAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQA 105 (314)
Q Consensus 26 v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~ 105 (314)
.....++ .|..++.++.|..|| .... .. .....+...+.++...++ ..+..++.+ +..+|. +++.....
T Consensus 25 ~~~d~~g-~l~v~t~~~~l~~~d-~~g~--~~--~~~~~~~~~~~~~~~~~~--g~l~v~t~~--l~~~d~-~g~~~~~~ 93 (330)
T 3hxj_A 25 PILAKNG-TIYLGSSNKNLYAIN-TDGS--VK--WFFKSGEIIECRPSIGKD--GTIYFGSDK--VYAINP-DGTEKWRF 93 (330)
T ss_dssp CEECTTS-CEECSSTTTTTEEEC-TTSC--EE--ESSCGGGEEEECCEETTT--TEECCSSCE--EEEECC-CGGGGGGS
T ss_pred ceEccCC-eEEEEcCCCEEEEEC-CCCc--EE--EEEecCCCcccceEEecC--CcEEEecCc--EEEECC-CCcEEEEE
Confidence 3344445 456667788888888 4422 11 112222333455666544 245555554 888886 55443322
Q ss_pred EecCceE-EEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccC-cceeeEEeccCCCeEEEEcCCceEEEEeCCCCCc
Q 021319 106 ELSGENI-NITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFG-YEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP 183 (314)
Q Consensus 106 ~~~~~~~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 183 (314)
....... ...+. +..+.+++.++.+..+|.. .+........ ..+..+...+++. +.++..++.+..++.. .+.
T Consensus 94 ~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~ 168 (330)
T 3hxj_A 94 DTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTE 168 (330)
T ss_dssp CC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCE
T ss_pred ECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCE
Confidence 2222111 12222 5667888888999999987 5555443332 2234444444555 5567777889999877 555
Q ss_pred eeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECC
Q 021319 184 LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVH 263 (314)
Q Consensus 184 ~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~ 263 (314)
+..+......+.++.+++++.+.+.. +.+..+| .+++.+..+......+.++...++|.+.+ ++.++.+..++ .
T Consensus 169 ~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~-~ 242 (330)
T 3hxj_A 169 KWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAIN-P 242 (330)
T ss_dssp EEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEEC-T
T ss_pred eEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEEC-C
Confidence 44444444556778888888866544 7799999 67666655554445577788888876555 66677787777 4
Q ss_pred CCCeEEEEeccC-ccceeEEcCCCCeeEEEecCCcccccc
Q 021319 264 TGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKNKYQAD 302 (314)
Q Consensus 264 ~~~~~~~~~~~~-~i~~v~~~~~~~~la~~~~d~~~~~~~ 302 (314)
+++.+..+.... .+.++...+++.+ ..++.++.++.++
T Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~ggl~~~d 281 (330)
T 3hxj_A 243 DGTEKWRFKTGKRIESSPVIGNTDTI-YFGSYDGHLYAIN 281 (330)
T ss_dssp TSCEEEEEECSSCCCSCCEECTTSCE-EEECTTCEEEEEC
T ss_pred CCCEeEEeeCCCCccccceEcCCCeE-EEecCCCCEEEEC
Confidence 677776665433 3455666655654 4566665555544
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.84 E-value=6.2e-05 Score=70.95 Aligned_cols=276 Identities=11% Similarity=0.076 Sum_probs=173.0
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEee-----cCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~-----~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
...|.++...++|..-+ |..++-|..|+..... ....... -....|.++...+++ + |..|..++-|..|
T Consensus 309 ~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~---~~~~~~~~~~~~l~~~~V~~i~~d~~g-~-lWiGt~~~Gl~~~ 382 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNR---FKNIRNIPYKNSLSDNVVSCIVEDKDK-N-LWIGTNDGGLNLY 382 (795)
T ss_dssp SSCEEEEEECTTSCEEE-EESSSCEEEECGGGGS---SEEECCCTTSSSCSCSSEEEEEECTTS-C-EEEEESSSCEEEE
T ss_pred CCcEEEEEEeCCcCEEE-EECCCCeEEeCCCccc---ceEEcCCCCCCCCCCCeeEEEEECCCC-C-EEEEECCCCeEEE
Confidence 35799999998887544 5555667777754321 1111110 023568898887654 3 5567788889999
Q ss_pred eCCCCceeeeEE--------e-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec-----cCcceeeEEeccC
Q 021319 95 DARSGKCSQQAE--------L-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK-----FGYEVNEIAWNMT 160 (314)
Q Consensus 95 d~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~~~~~~~~~ 160 (314)
|..++....... + ...+.++...++++.|.+|+.++.+..+|..+.+...-.. ....+.++...++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 462 (795)
T 4a2l_A 383 NPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGE 462 (795)
T ss_dssp CTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSS
T ss_pred cCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCC
Confidence 988776543211 1 2334567777788767888888889999987654322111 1235677777777
Q ss_pred CCeEEEEcCCceEEEEeCCCCCceeeee-------ecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee---
Q 021319 161 GEMFFLTTGNGTVEVLTYPSLRPLDTVV-------AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT--- 230 (314)
Q Consensus 161 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~--- 230 (314)
+...+... +.+..++....+. ..+. .....|.++..+++|++.+... +.+..||..+.+. .+.
T Consensus 463 g~lwigt~--~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~ 535 (795)
T 4a2l_A 463 GNLWLGTL--SALVRFNPEQRSF-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASIL 535 (795)
T ss_dssp SCEEEEES--SCEEEEETTTTEE-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCS
T ss_pred CCEEEEec--CceeEEeCCCCeE-EEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCC
Confidence 77666554 3466777544321 1111 1234689999999998766443 4588899877655 232
Q ss_pred ----ecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec-----cCccceeEEcCCCCeeEEEecCCccccc
Q 021319 231 ----KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC-----RAAMNSVEWNPKYNLLAYAGDDKNKYQA 301 (314)
Q Consensus 231 ----~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~-----~~~i~~v~~~~~~~~la~~~~d~~~~~~ 301 (314)
.....|.++...++|.+.++.. . -+..+|..+++ +..+.. ...|.++...+++++.+++..--..|.+
T Consensus 536 ~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~-~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~ 612 (795)
T 4a2l_A 536 PVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQ-IKRYNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNP 612 (795)
T ss_dssp CSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTE-EEEECGGGTCSCSCEEEEEECTTSCEEEEETTEEEEEET
T ss_pred CCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCc-EEEeCCCCCCchhheEEEEECCCCCEEEEcCCceEEEcC
Confidence 1234688999999998776544 3 47788876654 333332 2358888888888887666433344556
Q ss_pred ccceEEeccc
Q 021319 302 DEGVFRIYGF 311 (314)
Q Consensus 302 ~~~~~~~~~~ 311 (314)
+.+.++.|+.
T Consensus 613 ~~~~~~~~~~ 622 (795)
T 4a2l_A 613 ETEKFRNFTE 622 (795)
T ss_dssp TTTEEEEECG
T ss_pred CCCcEEEcCC
Confidence 6778887754
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.83 E-value=6.6e-06 Score=74.57 Aligned_cols=264 Identities=15% Similarity=0.036 Sum_probs=153.6
Q ss_pred CCEEEEeeC-CCcEEEeec-CCCCCCceeeEEeecCC---------CCEEEEEEcCCCC---CEEEEEeCCCcEEEEeCC
Q 021319 32 GTKLASGSV-DQTARVWHI-EPHGHGKVKDIELRGHA---------DSVDQLCWDPKHA---DLIATASGDKTVRLWDAR 97 (314)
Q Consensus 32 g~~l~s~~~-D~~v~iw~~-~~~~~~~~~~~~~~~h~---------~~v~~l~~~~~~~---~~l~s~~~D~~v~iwd~~ 97 (314)
+..+..++. ++.|.-+|. ++.. .+......... .....+++.|.++ ..|+.++.|+.+.-+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~--~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGT--ILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTS--EEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCc--EEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 345556666 788888887 5543 22222221110 0011234433222 236778899999999999
Q ss_pred CCceeeeEEecC-----ceEE-EEEccCCCEEEEEe------CCCcEEEEEccCCeEeeeeccCcce-------------
Q 021319 98 SGKCSQQAELSG-----ENIN-ITYKPDGTHIAVGN------RDDELTILDVRKFKPIHRRKFGYEV------------- 152 (314)
Q Consensus 98 ~~~~~~~~~~~~-----~~~~-~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~------------- 152 (314)
+|+..-...... .... -.. .++ .++++. .++.|..+|.++.+.+.+.....+.
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 998765554332 1110 011 134 455554 3789999999998887665443211
Q ss_pred --------------------------eeEEeccCCCeEEEEcCC----------------ceEEEEeCCCCCceeeeeec
Q 021319 153 --------------------------NEIAWNMTGEMFFLTTGN----------------GTVEVLTYPSLRPLDTVVAH 190 (314)
Q Consensus 153 --------------------------~~~~~~~~~~~~~~~~~~----------------g~~~~~~~~~~~~~~~~~~~ 190 (314)
...++.+....++++..+ +.+..++..+.+.+-.++..
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 022344566677777665 37888888877765544322
Q ss_pred cc---------ceEEEEEC-CCC---CEEEEeeCCCeEEEeeCCCcEEEEEeeecc-------------cCe--------
Q 021319 191 TA---------GCYCIAID-PMG---RYFAVGSADSLVSLWDISEMLCVRTFTKLE-------------WPV-------- 236 (314)
Q Consensus 191 ~~---------~i~~i~~~-~~~---~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~-------------~~v-------- 236 (314)
.. ...-+... .+| +.++.++.+|.+.++|..+++.+-...... .++
T Consensus 298 ~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 377 (599)
T 1w6s_A 298 PHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTR 377 (599)
T ss_dssp TTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCC
T ss_pred CCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCC
Confidence 11 11222332 567 567889999999999999998775543111 011
Q ss_pred ------------------EEEEEccCCcEEEEe---------------------------------c------CCceEEE
Q 021319 237 ------------------RTISFSHTGDYIASA---------------------------------S------EDLFIDI 259 (314)
Q Consensus 237 ------------------~~~~~sp~~~~l~s~---------------------------------s------~d~~v~v 259 (314)
..++++|+..+++.. + .++.+..
T Consensus 378 ~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A 457 (599)
T 1w6s_A 378 MDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKA 457 (599)
T ss_dssp TTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEE
T ss_pred CCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEE
Confidence 235677776655442 1 4578999
Q ss_pred EECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCccc
Q 021319 260 SNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKY 299 (314)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~ 299 (314)
||..+|+.+.+.+...+..+-.....+.++..++.|+.++
T Consensus 458 ~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~ 497 (599)
T 1w6s_A 458 YNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLK 497 (599)
T ss_dssp ECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEE
T ss_pred EECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEE
Confidence 9999999998887554443322333455666677665443
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.80 E-value=3.6e-05 Score=69.69 Aligned_cols=255 Identities=13% Similarity=0.118 Sum_probs=152.5
Q ss_pred CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCC--CEE---EEEEcCCCCC-EEEEEe------CCCcEEEEeCCCC
Q 021319 32 GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHAD--SVD---QLCWDPKHAD-LIATAS------GDKTVRLWDARSG 99 (314)
Q Consensus 32 g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~--~v~---~l~~~~~~~~-~l~s~~------~D~~v~iwd~~~~ 99 (314)
+..++.++.|+.|..+|.+++. .+....+..+.. .+. .+.=....+. .++.++ .++.|.-+|..+|
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~--~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGK--VVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCC--EEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCC--EEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 4567777888999888887643 222222222110 011 1111101111 555554 3789999999999
Q ss_pred ceeeeEEecCce------------------------------------------EEEEEccCCCEEEEEeC---------
Q 021319 100 KCSQQAELSGEN------------------------------------------INITYKPDGTHIAVGNR--------- 128 (314)
Q Consensus 100 ~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~l~~~~~--------- 128 (314)
+..-........ ..+++.|+...++++..
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 876543321100 12456677778887763
Q ss_pred -----------C----CcEEEEEccCCeEeeeeccCcc-------e-eeEEec---cCCC---eEEEEcCCceEEEEeCC
Q 021319 129 -----------D----DELTILDVRKFKPIHRRKFGYE-------V-NEIAWN---MTGE---MFFLTTGNGTVEVLTYP 179 (314)
Q Consensus 129 -----------d----~~i~i~d~~~~~~~~~~~~~~~-------~-~~~~~~---~~~~---~~~~~~~~g~~~~~~~~ 179 (314)
| +.|..+|+++.+.+...+.... . ..+... .+++ .++.+..+|.+++++..
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 354 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRS 354 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETT
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECC
Confidence 2 5799999999988877653211 0 112222 3553 67778899999999987
Q ss_pred CCCceeeeeecc------------cc---------------------------------eEEEEECCCCCEEEEee----
Q 021319 180 SLRPLDTVVAHT------------AG---------------------------------CYCIAIDPMGRYFAVGS---- 210 (314)
Q Consensus 180 ~~~~~~~~~~~~------------~~---------------------------------i~~i~~~~~~~~l~t~~---- 210 (314)
+.+.+....... .. -..++++|+...+++..
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 766554332110 00 01346677655544432
Q ss_pred -----------------------------CCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEE
Q 021319 211 -----------------------------ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISN 261 (314)
Q Consensus 211 -----------------------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~ 261 (314)
.+|.|..||+.+++.+-+..... ++..-.....+.+++.++.|+.++.+|
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEE
Confidence 35789999999998775554321 222112223467788899999999999
Q ss_pred CCCCCeEEEEeccCccce--eEEcCCCCee
Q 021319 262 VHTGRTVHQIPCRAAMNS--VEWNPKYNLL 289 (314)
Q Consensus 262 ~~~~~~~~~~~~~~~i~~--v~~~~~~~~l 289 (314)
..+|+.+.++.....+.+ +.+..+++..
T Consensus 514 ~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 514 AKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp TTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 999999999876555543 6777787644
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.77 E-value=4.6e-05 Score=63.14 Aligned_cols=223 Identities=13% Similarity=0.046 Sum_probs=133.4
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC-C-cEEEEeCCC
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD-K-TVRLWDARS 98 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D-~-~v~iwd~~~ 98 (314)
.....++|+++|.++++-..++.|..|+.+. ...... .-...+..+++.+++ +++++.... + .|..+|..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g---~~~~~~---~~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG---NQQIHA---TVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC---CEEEEE---ECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC---ceEEEE---eCCCCceeEEEcCCC-cEEEEeccCCcceEEEEcCCC
Confidence 5678999999999877777788888887653 111111 123457889999875 465554432 2 466678777
Q ss_pred CceeeeEEecC--ceEEEEEccCCCEEEEEeCCCcEEEEEccCCeE-eee--------eccC--cceeeEEeccCCCeE-
Q 021319 99 GKCSQQAELSG--ENINITYKPDGTHIAVGNRDDELTILDVRKFKP-IHR--------RKFG--YEVNEIAWNMTGEMF- 164 (314)
Q Consensus 99 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~--------~~~~--~~~~~~~~~~~~~~~- 164 (314)
++......... ....++..+++..+++-...+.|..+|....+. +.. .... ...+.+ ++++..+
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred CeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 76544333211 122344445554444444578888888765321 110 0000 123344 6777655
Q ss_pred EEEcCCceEEEEeCCC-CCc--eeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEE--EEeeecccCeEEE
Q 021319 165 FLTTGNGTVEVLTYPS-LRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCV--RTFTKLEWPVRTI 239 (314)
Q Consensus 165 ~~~~~~g~~~~~~~~~-~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~--~~~~~~~~~v~~~ 239 (314)
++-...+.+..++... .+. ...+ .....+..++++++|++.++....+.|.++|.. ++.. ..+...-....++
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~-~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~ 260 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAV 260 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEE-eccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEE
Confidence 4455678999998754 211 1111 112346778999999987777777899999975 4432 2222222457889
Q ss_pred EEc---cCCcEEEEecCC
Q 021319 240 SFS---HTGDYIASASED 254 (314)
Q Consensus 240 ~~s---p~~~~l~s~s~d 254 (314)
+|. |+++.|+.++..
T Consensus 261 a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 261 AFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EECCSTTTTTEEEEEECT
T ss_pred EEecccCCCCEEEEECCC
Confidence 998 887766655443
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.76 E-value=1.2e-05 Score=72.95 Aligned_cols=253 Identities=13% Similarity=0.077 Sum_probs=151.5
Q ss_pred EEEeeCCCcEEEeecCCCCCCceeeEEeecCCC--CEEE-EEEcCCCCCEEEEEe------CCCcEEEEeCCCCceeeeE
Q 021319 35 LASGSVDQTARVWHIEPHGHGKVKDIELRGHAD--SVDQ-LCWDPKHADLIATAS------GDKTVRLWDARSGKCSQQA 105 (314)
Q Consensus 35 l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~--~v~~-l~~~~~~~~~l~s~~------~D~~v~iwd~~~~~~~~~~ 105 (314)
|+.++.|+.|..+|..++. .+....+..+.. .+.. -... . + .++.++ .++.|+-+|..+|+..-..
T Consensus 124 V~v~t~dg~l~AlDa~TG~--~~W~~~~~~~~~~~~~~ssP~v~-~-g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGE--TVWKVENSDIKVGSTLTIAPYVV-K-D-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp EEEECTTSEEEEEETTTCC--EEEEEECCCGGGTCBCCSCCEEE-T-T-EEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCC--EEEeecCCCCCccceeecCCEEE-C-C-EEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 7778889999888887643 222223222110 1111 0111 2 3 444444 3899999999999876554
Q ss_pred EecCce---------------------------------------EEEEEccCCCEEEEEeCCC----------------
Q 021319 106 ELSGEN---------------------------------------INITYKPDGTHIAVGNRDD---------------- 130 (314)
Q Consensus 106 ~~~~~~---------------------------------------~~~~~~~~~~~l~~~~~d~---------------- 130 (314)
...... ..+++.++...++.+..+.
T Consensus 199 ~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~ 278 (599)
T 1w6s_A 199 YATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTM 278 (599)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSS
T ss_pred cCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccc
Confidence 432211 1245667788888887653
Q ss_pred cEEEEEccCCeEeeeeccCcc------e--eeEEec---cCC---CeEEEEcCCceEEEEeCCCCCceeeeeec------
Q 021319 131 ELTILDVRKFKPIHRRKFGYE------V--NEIAWN---MTG---EMFFLTTGNGTVEVLTYPSLRPLDTVVAH------ 190 (314)
Q Consensus 131 ~i~i~d~~~~~~~~~~~~~~~------~--~~~~~~---~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------ 190 (314)
.+..+|+++.+.+...+.... . .-+... .++ ..++.+..+|.+.+++..+.+.+......
T Consensus 279 sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~ 358 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVF 358 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred eEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccc
Confidence 799999999888776654311 0 111121 356 45666788999999998777655433210
Q ss_pred ------cc-c--------------------------eEEEEECCCCCEEEEe----------------------------
Q 021319 191 ------TA-G--------------------------CYCIAIDPMGRYFAVG---------------------------- 209 (314)
Q Consensus 191 ------~~-~--------------------------i~~i~~~~~~~~l~t~---------------------------- 209 (314)
.+ . -..++++|+..++++.
T Consensus 359 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 438 (599)
T 1w6s_A 359 KSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNM 438 (599)
T ss_dssp EEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred cccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceeccccee
Confidence 00 0 0235666665555432
Q ss_pred -----e------CCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEeccCcc-
Q 021319 210 -----S------ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM- 277 (314)
Q Consensus 210 -----~------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i- 277 (314)
+ .+|.+..||+.+++.+-+... ..+...-.....+.+++.++.|+.++.+|..+|+.+.++.....+
T Consensus 439 ~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~ 517 (599)
T 1w6s_A 439 YPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAI 517 (599)
T ss_dssp EECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred ccCCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcE
Confidence 1 347899999999887655532 112211112335677778999999999999999999988754432
Q ss_pred -ceeEEcCCCCe-eEEEe
Q 021319 278 -NSVEWNPKYNL-LAYAG 293 (314)
Q Consensus 278 -~~v~~~~~~~~-la~~~ 293 (314)
.-+.+..+++. +++.+
T Consensus 518 ~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 518 GYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp SCCEEEEETTEEEEEEEE
T ss_pred eccEEEEeCCEEEEEEEc
Confidence 23556667764 44433
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.76 E-value=0.00015 Score=68.37 Aligned_cols=274 Identities=9% Similarity=0.056 Sum_probs=167.6
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEee------cCCCCEEEEEEcCCCCCEEEEEeCCCcEEE
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHADSVDQLCWDPKHADLIATASGDKTVRL 93 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~l~s~~~D~~v~i 93 (314)
...|+++...++|.+.+... + -|.+|+.... ........ -....|.++...+++ .|..|..++-|..
T Consensus 262 ~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~---~~~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~~~Gl~~ 334 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGTF-N-DLNIYHEGTD---SFASYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTYFGGLNY 334 (795)
T ss_dssp CSBEEEEEECTTSCEEEEES-S-CEEEEETTTT---EEEEECCCTTSTTSCSSSCEEEEEECTTS--CEEEEESSSCEEE
T ss_pred CCeEEEEEEcCCCCEEEEeC-C-hhheEcCCCC---eEEEEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEECCCCeEE
Confidence 35699999998888665543 3 5778876532 11111100 123568999888764 3556777788999
Q ss_pred EeCCCCceeeeEE------e-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeee---------ccCcceeeEEe
Q 021319 94 WDARSGKCSQQAE------L-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRR---------KFGYEVNEIAW 157 (314)
Q Consensus 94 wd~~~~~~~~~~~------~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---------~~~~~~~~~~~ 157 (314)
++...+....... + ...+.++...++|+ |.+|+.++.+..+|..+.+...-. .....+.++..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 413 (795)
T 4a2l_A 335 YHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV 413 (795)
T ss_dssp ECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE
T ss_pred eCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE
Confidence 9876554322111 1 22345666666665 666888888999998764332211 11234667777
Q ss_pred ccCCCeEEEEcCCceEEEEeCCCCCceeeee-----ecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee-
Q 021319 158 NMTGEMFFLTTGNGTVEVLTYPSLRPLDTVV-----AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK- 231 (314)
Q Consensus 158 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~- 231 (314)
..++..+.+++.++.+..++....+. ..+. .....|.++..+++|++.+.. .+ .+..||..+.+.......
T Consensus 414 d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~ 490 (795)
T 4a2l_A 414 DEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTTIEKEK 490 (795)
T ss_dssp ETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEECCBCT
T ss_pred cCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEEccccc
Confidence 77777455566656688887654432 1221 123568999999988866544 34 488999877654322111
Q ss_pred -----cccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe--------ccCccceeEEcCCCCeeEEEecCCcc
Q 021319 232 -----LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP--------CRAAMNSVEWNPKYNLLAYAGDDKNK 298 (314)
Q Consensus 232 -----~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~--------~~~~i~~v~~~~~~~~la~~~~d~~~ 298 (314)
....|.++...++|.+.+... . -+..++..+++. .+. ....|+++...+++.+.+.+.. .+
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--Gl 564 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--GF 564 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--CE
T ss_pred cccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--Cc
Confidence 124688999999998777554 4 477888776554 222 1235888999888886654432 44
Q ss_pred cc--cccceEEecc
Q 021319 299 YQ--ADEGVFRIYG 310 (314)
Q Consensus 299 ~~--~~~~~~~~~~ 310 (314)
+. .+.+.++.|.
T Consensus 565 ~~~d~~~~~~~~~~ 578 (795)
T 4a2l_A 565 YCFNEKDKQIKRYN 578 (795)
T ss_dssp EEEETTTTEEEEEC
T ss_pred eeECCCCCcEEEeC
Confidence 44 4456666664
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.74 E-value=4.7e-05 Score=63.11 Aligned_cols=222 Identities=10% Similarity=0.064 Sum_probs=132.5
Q ss_pred CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCC--cEEEEEccCCeEee
Q 021319 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDD--ELTILDVRKFKPIH 144 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~ 144 (314)
.....++|++++ +++++-..++.|..||... ..............+++.++++++++..... .+..+|..+.+...
T Consensus 32 ~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDG-TIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCC-CEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 456789999864 5777766789999999865 3344444455667799999999766554433 36667766554322
Q ss_pred eecc--CcceeeEEeccCCCeEEEEcCCceEEEEeCCCCC-cee---------eeeecccceEEEEECCCCCEEEEe-eC
Q 021319 145 RRKF--GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLR-PLD---------TVVAHTAGCYCIAIDPMGRYFAVG-SA 211 (314)
Q Consensus 145 ~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~---------~~~~~~~~i~~i~~~~~~~~l~t~-~~ 211 (314)
.... ......++..+.+..+++-...+.++.++....+ .+. .....-...+.+ +++++.|..+ ..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 1111 1122333333444444444467888888764321 010 000111234555 7788765544 45
Q ss_pred CCeEEEeeCCC-cEE--EEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEE--EEecc-CccceeEEc--
Q 021319 212 DSLVSLWDISE-MLC--VRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVH--QIPCR-AAMNSVEWN-- 283 (314)
Q Consensus 212 dg~i~vwd~~~-~~~--~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~--~~~~~-~~i~~v~~~-- 283 (314)
.+.|..+|+.. +.. ...+... .....++++++|++.++....+.|.+++.. |+... .+... ...++++|.
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~ 265 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQT 265 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCS
T ss_pred CCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecc
Confidence 67899999864 221 1222111 234668999999988877778899999875 66532 22222 457899999
Q ss_pred -CCCCeeEEEec
Q 021319 284 -PKYNLLAYAGD 294 (314)
Q Consensus 284 -~~~~~la~~~~ 294 (314)
|++..|..++.
T Consensus 266 ~~d~~~LyVt~~ 277 (306)
T 2p4o_A 266 EGDCTAIYVVTN 277 (306)
T ss_dssp TTTTTEEEEEEC
T ss_pred cCCCCEEEEECC
Confidence 88766655544
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.70 E-value=9.6e-05 Score=62.50 Aligned_cols=245 Identities=9% Similarity=-0.037 Sum_probs=143.6
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
.+..+|.+..+++.++++- ...|+..+++.. . ....+. ....+..++|++..+.+.++-...+.|..++...+
T Consensus 33 ~d~~~C~~~~~~~~ll~~~--~~~I~~i~~~g~---~-~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 33 PDRRSCKALGPEPVLLFAN--RIDIRQVLPHRS---E-YTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp TTSSCEEESSSCCEEEEEC--BSCEEEECTTSC---C-EEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCcccccccCceeEeec--ccceEEEeCCCC---e-eEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCC
Confidence 3445566655644334433 244666665432 1 111222 23447889999876666667667889999998766
Q ss_pred ceeeeEEe-cCceEEEEEccCCCEE-EEEeCCCcEEEEEccCCeEeeee-ccCcceeeEEeccCCCeEEEE-cCC-ceEE
Q 021319 100 KCSQQAEL-SGENINITYKPDGTHI-AVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLT-TGN-GTVE 174 (314)
Q Consensus 100 ~~~~~~~~-~~~~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~-g~~~ 174 (314)
........ ......+++.+.+..| ++-...+.|.+.++......... ........++..|.+..++.+ ... +.|.
T Consensus 106 ~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 106 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 185 (349)
T ss_dssp SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEE
Confidence 53332221 1234567888755555 45555678888887643222111 122356788888865554444 444 7888
Q ss_pred EEeCCCCCceeeeeecccceEEEEECCCCCEEEEe-eCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecC
Q 021319 175 VLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVG-SADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASE 253 (314)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~ 253 (314)
.++................++.++++|++..|..+ ...+.|..+|+........+...-.....+++ ..+....+-..
T Consensus 186 r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~ 264 (349)
T 3v64_C 186 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWH 264 (349)
T ss_dssp EEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred EEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCC
Confidence 88775433222222223457899999876665544 45578999998643222222222234567777 45666666667
Q ss_pred CceEEEEECCCCCeEEEEe
Q 021319 254 DLFIDISNVHTGRTVHQIP 272 (314)
Q Consensus 254 d~~v~v~~~~~~~~~~~~~ 272 (314)
.+.|...+..+|+....+.
T Consensus 265 ~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 265 TKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TTEEEEEETTTCCSCEEEE
T ss_pred CCeEEEEEccCCCccEEec
Confidence 7889888877777666554
No 264
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.69 E-value=2.9e-05 Score=62.20 Aligned_cols=199 Identities=11% Similarity=0.169 Sum_probs=132.5
Q ss_pred EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEec--CceEEEEEccCCCEEEEEeCCCcEEEEEcc
Q 021319 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS--GENINITYKPDGTHIAVGNRDDELTILDVR 138 (314)
Q Consensus 61 ~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 138 (314)
.+.|-...+..++|+|+.+.+.+....++.|...|.. ++..+...+. ...-.+++.+++.++++...++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4556667799999999866676778889999999997 8877776654 355678888888877776677888888865
Q ss_pred CCeE---eeeecc-------CcceeeEEeccCCCeEEEEcCCceEEEEeCCC---CCceeeee-------ecccceEEEE
Q 021319 139 KFKP---IHRRKF-------GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPS---LRPLDTVV-------AHTAGCYCIA 198 (314)
Q Consensus 139 ~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-------~~~~~i~~i~ 198 (314)
.... +..... ......++|.+.++.++++.+.....+|.+.. ...+.... .+...+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 4332 222211 22347899999998887777665555555431 11111110 1223567899
Q ss_pred ECCC-CCEEEEeeCCCeEEEeeCCCcEEEEEeeecc---------cCeEEEEEccCCcEEEEecCCceEEEEEC
Q 021319 199 IDPM-GRYFAVGSADSLVSLWDISEMLCVRTFTKLE---------WPVRTISFSHTGDYIASASEDLFIDISNV 262 (314)
Q Consensus 199 ~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~---------~~v~~~~~sp~~~~l~s~s~d~~v~v~~~ 262 (314)
++|. +++++.......+..+|.. ++.+..+.-.. .....|+|.|+|+..+ +|+-..++++..
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEEEEe
Confidence 9985 4566677777889999975 44544443221 1457899999998554 477777777654
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.66 E-value=0.00012 Score=62.72 Aligned_cols=241 Identities=9% Similarity=-0.042 Sum_probs=141.0
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceee
Q 021319 24 HSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ 103 (314)
Q Consensus 24 ~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~ 103 (314)
+|.+..+++ +|+-+. ...|+..+++... .. ..+. ....+..++|++.++.++++-...+.|..++...+....
T Consensus 80 ~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~---~~-~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 80 SCKALGPEP-VLLFAN-RIDIRQVLPHRSE---YT-LLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 152 (386)
T ss_dssp CEEECSSCC-EEEEEC-BSCEEEECTTSCC---CE-EEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE
T ss_pred eECCccccc-eeEeec-CccceeeccCCCc---EE-EEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE
Confidence 344444433 333333 3567777665321 11 1122 334578899998766677777778899999987665333
Q ss_pred eEEe-cCceEEEEEccCCCEEE-EEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEc-CC-ceEEEEeC
Q 021319 104 QAEL-SGENINITYKPDGTHIA-VGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTT-GN-GTVEVLTY 178 (314)
Q Consensus 104 ~~~~-~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~ 178 (314)
.... ......+++.+.+..|+ +-...+.|.+.++.......... .......++..|.+..++.+. .. +.|..++.
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 2221 12344577777555554 44556678888875432211111 123567888888666555544 44 67888777
Q ss_pred CCCCceeeeeecccceEEEEECCCCCEEEEe-eCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceE
Q 021319 179 PSLRPLDTVVAHTAGCYCIAIDPMGRYFAVG-SADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFI 257 (314)
Q Consensus 179 ~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v 257 (314)
...............++.++++|++..|..+ ...+.|..+|+........+.........+++ ..+.++.+....+.|
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V 311 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSI 311 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeE
Confidence 5443222222223457899999876655544 45678999998643222222222234567777 556666677778889
Q ss_pred EEEECCCCCeEEEEe
Q 021319 258 DISNVHTGRTVHQIP 272 (314)
Q Consensus 258 ~v~~~~~~~~~~~~~ 272 (314)
...+..+|+.+..+.
T Consensus 312 ~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 312 NSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEETTTCCSCEEEE
T ss_pred EEEECCCCcceEEEc
Confidence 999977777766654
No 266
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.64 E-value=0.00027 Score=66.43 Aligned_cols=279 Identities=12% Similarity=0.097 Sum_probs=167.7
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEe--------ecCCCCEEEEEEcCCCCCEEEEEeCCCcE
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL--------RGHADSVDQLCWDPKHADLIATASGDKTV 91 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~--------~~h~~~v~~l~~~~~~~~~l~s~~~D~~v 91 (314)
...|.++...++|.+-+ |..++-|..++..... ...... .-....|.++...+++ . |..|..++-|
T Consensus 312 ~~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~-lWigt~~~Gl 385 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWI-GTWGGGINFISNAPPT---FHTWSYSPTQMNESSLSNKVVSSVCDDGQG-K-LWIGTDGGGI 385 (781)
T ss_dssp SSCEEEEEECSSCCEEE-EEBSSCEEEECSSCCS---CEEEC----CCCSSCCSSSCEEEEEECTTS-C-EEEEEBSSCE
T ss_pred CCeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCc---ceeeccCccccccCCCCCcceEEEEEcCCC-C-EEEEeCCCcE
Confidence 45799999988887544 4555667777754321 111110 0123568888887653 3 4556666778
Q ss_pred EEEeCCCCceeeeE---Ee-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeec---cCcceeeEEeccCCCeE
Q 021319 92 RLWDARSGKCSQQA---EL-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRK---FGYEVNEIAWNMTGEMF 164 (314)
Q Consensus 92 ~iwd~~~~~~~~~~---~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 164 (314)
..+|..++...... .. ...+.++...+++. |.+|+.++.+..+|.++.+...-.. ....+.++...+++...
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw 464 (781)
T 3v9f_A 386 NVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW 464 (781)
T ss_dssp EEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE
T ss_pred EEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE
Confidence 89998755432211 11 13345566666665 5557777789999887654322211 12456667666666655
Q ss_pred EEEcCCceEEEEeCCCCCceeeeeec-----ccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee----cccC
Q 021319 165 FLTTGNGTVEVLTYPSLRPLDTVVAH-----TAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK----LEWP 235 (314)
Q Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~ 235 (314)
+.. . +.+..++....+........ ...+.++..+++|++.+. +.++.+..||..+.+.. .+.. ....
T Consensus 465 igt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~ 540 (781)
T 3v9f_A 465 IGT-H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVR-KFNQYEGFCSNT 540 (781)
T ss_dssp EEE-T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEE-EECTTTTCSCSC
T ss_pred EEE-C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEE-EccCCCCCCCCe
Confidence 544 4 45777776543322111111 346899999999987664 44344777988765433 3321 1235
Q ss_pred eEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec-----cCccceeEEcCCCCeeEEEecCCcccccccceEEecc
Q 021319 236 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC-----RAAMNSVEWNPKYNLLAYAGDDKNKYQADEGVFRIYG 310 (314)
Q Consensus 236 v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~-----~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~ 310 (314)
|.++...++|.+.++.. +|.+..+|..+++ +..+.. ...|.++...+++++.+++..--..|.++.+.++.|+
T Consensus 541 i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~-~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 541 INQIYRSSKGQMWLATG-EGLVCFPSARNFD-YQVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTYD 618 (781)
T ss_dssp EEEEEECTTSCEEEEET-TEEEEESCTTTCC-CEEECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTEEEEEC
T ss_pred eEEEEECCCCCEEEEEC-CCceEEECCCCCc-EEEccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCceEEec
Confidence 88999999998777554 7766888887665 333321 2358889888888877665444444556677888776
Q ss_pred c
Q 021319 311 F 311 (314)
Q Consensus 311 ~ 311 (314)
.
T Consensus 619 ~ 619 (781)
T 3v9f_A 619 H 619 (781)
T ss_dssp G
T ss_pred c
Confidence 4
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=5.2e-05 Score=66.06 Aligned_cols=153 Identities=18% Similarity=0.218 Sum_probs=95.2
Q ss_pred CEEEEEEcC-CCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCC-C----cEEEEEccC-C
Q 021319 68 SVDQLCWDP-KHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRD-D----ELTILDVRK-F 140 (314)
Q Consensus 68 ~v~~l~~~~-~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-~----~i~i~d~~~-~ 140 (314)
....++++| .++. |..+...+.|+.+|+..+..............++++++++.|+++... + .+.+++... .
T Consensus 138 ~P~~lavdp~~~g~-Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNH-LYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEE-EEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCe-EEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 346788887 3444 444444488999999877655444444557789999999966666542 2 233344322 1
Q ss_pred eEeeeeccCcceeeEEecc-CCCeEEEEcCCceEEEEeCCCCCceeeee-ecccceEEEEECCCCCEEE-EeeCCCeEEE
Q 021319 141 KPIHRRKFGYEVNEIAWNM-TGEMFFLTTGNGTVEVLTYPSLRPLDTVV-AHTAGCYCIAIDPMGRYFA-VGSADSLVSL 217 (314)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~l~-t~~~dg~i~v 217 (314)
..............++++| ++.++++-...+.+..++........... ........++++|++++|. +-...+.|..
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 1111111223457788899 67777777788999999876543211111 1123578999999999554 4455678999
Q ss_pred eeCC
Q 021319 218 WDIS 221 (314)
Q Consensus 218 wd~~ 221 (314)
++..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 8765
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.55 E-value=0.00037 Score=63.12 Aligned_cols=220 Identities=12% Similarity=0.047 Sum_probs=132.7
Q ss_pred CEEEEEeCCCcEEEEeCCCCceeeeEEecCc-----eE-E-EEEc--cCCC-EEEEEeC------CCcEEEEEccCCeEe
Q 021319 80 DLIATASGDKTVRLWDARSGKCSQQAELSGE-----NI-N-ITYK--PDGT-HIAVGNR------DDELTILDVRKFKPI 143 (314)
Q Consensus 80 ~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~-----~~-~-~~~~--~~~~-~l~~~~~------d~~i~i~d~~~~~~~ 143 (314)
..++.++.|+.|.-+|..+|+..-....... .. . +... .+++ .++++.. ++.+..+|.++.+.+
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence 4677888999999999999987655543321 10 0 1111 1233 5666543 788999999888776
Q ss_pred eeeccCcc------------------------------------------eeeEEeccCCCeEEEEcC------------
Q 021319 144 HRRKFGYE------------------------------------------VNEIAWNMTGEMFFLTTG------------ 169 (314)
Q Consensus 144 ~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~------------ 169 (314)
........ -...++.+....++++..
T Consensus 198 W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~ 277 (582)
T 1flg_A 198 WMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTA 277 (582)
T ss_dssp EEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSC
T ss_pred eecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccccc
Confidence 54322100 011334455556665553
Q ss_pred --------C----ceEEEEeCCCCCceeeeee--cc-------cceEEEEEC-CCCC---EEEEeeCCCeEEEeeCCCcE
Q 021319 170 --------N----GTVEVLTYPSLRPLDTVVA--HT-------AGCYCIAID-PMGR---YFAVGSADSLVSLWDISEML 224 (314)
Q Consensus 170 --------~----g~~~~~~~~~~~~~~~~~~--~~-------~~i~~i~~~-~~~~---~l~t~~~dg~i~vwd~~~~~ 224 (314)
+ +.+..++..+.+.+-.++. |. ....-+... .+|+ .++.++.+|.+.++|..+++
T Consensus 278 ~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 357 (582)
T 1flg_A 278 KGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGK 357 (582)
T ss_dssp TTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred CCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCC
Confidence 1 5788888887776655432 21 111222322 4664 78889999999999999988
Q ss_pred EEEEeeecc-------------cC--------------------------------eEEEEEccCCcEEEEec-------
Q 021319 225 CVRTFTKLE-------------WP--------------------------------VRTISFSHTGDYIASAS------- 252 (314)
Q Consensus 225 ~~~~~~~~~-------------~~--------------------------------v~~~~~sp~~~~l~s~s------- 252 (314)
.+-.+.... .+ ...++++|+..+++...
T Consensus 358 ~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~ 437 (582)
T 1flg_A 358 LQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDY 437 (582)
T ss_dssp EEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEE
T ss_pred EecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceee
Confidence 775543221 00 01346677655554432
Q ss_pred --------------------------CCceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEecCCccc
Q 021319 253 --------------------------EDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKY 299 (314)
Q Consensus 253 --------------------------~d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~ 299 (314)
.++.+..||..+|+.+.+.+...++..-.....+.++++++.|+.++
T Consensus 438 ~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 438 WTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEE
T ss_pred ecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEE
Confidence 36889999999999998887655544333333466677777665443
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.49 E-value=0.00025 Score=61.78 Aligned_cols=197 Identities=11% Similarity=0.116 Sum_probs=117.0
Q ss_pred CEEEEEEcCC--CCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCC-----cEEEEEccCC
Q 021319 68 SVDQLCWDPK--HADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDD-----ELTILDVRKF 140 (314)
Q Consensus 68 ~v~~l~~~~~--~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~ 140 (314)
....++|+|+ ++.+.+ +...+.|+.+|..++..............++++++++ |+++...+ .+..++....
T Consensus 140 ~P~gvavd~~s~~g~Lyv-~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYW-VGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEE-ECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEE-EeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4568899984 344444 4333899999998777655444344577899999999 55544321 2333332211
Q ss_pred -eEeeeeccCcceeeEEecc-CCCeEEEEcCCceEEEEeCCCCCceeeeee--cccceEEEEECCCCCEEEEe-eCCCeE
Q 021319 141 -KPIHRRKFGYEVNEIAWNM-TGEMFFLTTGNGTVEVLTYPSLRPLDTVVA--HTAGCYCIAIDPMGRYFAVG-SADSLV 215 (314)
Q Consensus 141 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~t~-~~dg~i 215 (314)
..............+++++ .+.++++-..++.++.++.........+.. .......++++|+++.|..+ ...+.|
T Consensus 218 ~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 218 FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1001111123456678888 677777777788888888764433122211 12234579999999955544 456789
Q ss_pred EEeeCC--CcEE--EEEeeec---------------ccCeEEEEE---------ccCCcEEEEecCCceEEEEECCCCCe
Q 021319 216 SLWDIS--EMLC--VRTFTKL---------------EWPVRTISF---------SHTGDYIASASEDLFIDISNVHTGRT 267 (314)
Q Consensus 216 ~vwd~~--~~~~--~~~~~~~---------------~~~v~~~~~---------sp~~~~l~s~s~d~~v~v~~~~~~~~ 267 (314)
+.++.. ++.. ...+.+. -.....+++ .++|.+.++-.....|+.++. +|..
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 998764 2211 1112111 012566888 777888887778888998884 5543
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.48 E-value=0.0004 Score=60.45 Aligned_cols=233 Identities=9% Similarity=0.075 Sum_probs=133.2
Q ss_pred cEEEEEECC-CCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCC----cEEEEeC
Q 021319 22 KVHSVAWNC-TGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDK----TVRLWDA 96 (314)
Q Consensus 22 ~V~~v~~s~-~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~----~v~iwd~ 96 (314)
....|+++| ++..|..+...+.|+.++.+.. .+. .+.........+++++++..++++...++ .+...+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~---~v~--~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE---YVS--TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT---EEE--EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC---EEE--EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 457889998 4555665555477888887542 122 22234456788999987643555544322 2333343
Q ss_pred CCCcee--eeEEecCceEEEEEcc-CCCEEEEEeCCCcEEEEEccCCeEe--eeeccCcceeeEEeccCCC-eEEEEcCC
Q 021319 97 RSGKCS--QQAELSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPI--HRRKFGYEVNEIAWNMTGE-MFFLTTGN 170 (314)
Q Consensus 97 ~~~~~~--~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 170 (314)
.+... ...........+++.| ++.++++-...+.|..+++...... ...........++++|+++ .+++-...
T Consensus 213 -~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 213 -ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp -GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred -CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 33222 2222233445678899 6666666667788999998765432 1121223467899999999 55555677
Q ss_pred ceEEEEeCCCC-Cc---eeeeeec---------------ccceE-EEEEC--------CCCCEEEEeeCCCeEEEeeCCC
Q 021319 171 GTVEVLTYPSL-RP---LDTVVAH---------------TAGCY-CIAID--------PMGRYFAVGSADSLVSLWDISE 222 (314)
Q Consensus 171 g~~~~~~~~~~-~~---~~~~~~~---------------~~~i~-~i~~~--------~~~~~l~t~~~dg~i~vwd~~~ 222 (314)
+.+..++.... .. ...+.+. -..+. .+++. +++.+.++-..++.|+.++. +
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~ 370 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-Q 370 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-T
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-C
Confidence 88888876432 11 1111111 11233 45553 44666666566778999984 4
Q ss_pred cEEEEEeeec---------c---------cCeEEEEEccC-CcEEEEecCCceEEEEEC
Q 021319 223 MLCVRTFTKL---------E---------WPVRTISFSHT-GDYIASASEDLFIDISNV 262 (314)
Q Consensus 223 ~~~~~~~~~~---------~---------~~v~~~~~sp~-~~~l~s~s~d~~v~v~~~ 262 (314)
+... ++.+. + .....|+++|+ +.++++-.....|+..+.
T Consensus 371 G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 371 GRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp SEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 5433 22221 1 13677888884 666665556667776654
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.46 E-value=0.00019 Score=57.54 Aligned_cols=184 Identities=8% Similarity=0.114 Sum_probs=118.2
Q ss_pred CceEEEEEccCCCEEE-EEeCCCcEEEEEccCCeEeeeeccC--cceeeEEeccCCCeEEEEcCCceEEEEeCCCCCce-
Q 021319 109 GENINITYKPDGTHIA-VGNRDDELTILDVRKFKPIHRRKFG--YEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPL- 184 (314)
Q Consensus 109 ~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~- 184 (314)
.+...+++.|+++.|+ +...++.|..+|+. .+.+.+.... .....+++..++.++++.-.++.+.++.......+
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 4567799999876555 57778889999987 6666665443 46778888888876666667788888876543321
Q ss_pred --eeee------ecccceEEEEECCCCCEEEEeeCCCeEEEeeCCC------cEEEEE--ee--ecccCeEEEEEccCC-
Q 021319 185 --DTVV------AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISE------MLCVRT--FT--KLEWPVRTISFSHTG- 245 (314)
Q Consensus 185 --~~~~------~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~------~~~~~~--~~--~~~~~v~~~~~sp~~- 245 (314)
.... ..+.....++++|.++.|.++.......+|.+.. ...+.. +. .....+..++++|..
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 1111 1234468999999987666665554455555431 122111 00 122357899999975
Q ss_pred cEEEEecCCceEEEEECCCCCeEEEEeccC----------ccceeEEcCCCCeeEEEecC
Q 021319 246 DYIASASEDLFIDISNVHTGRTVHQIPCRA----------AMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 246 ~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~----------~i~~v~~~~~~~~la~~~~d 295 (314)
.+++.......+.+.|. +|+.+..+.... --..|+|.|+|++.++ ++-
T Consensus 186 ~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~ 243 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEP 243 (255)
T ss_dssp EEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETT
T ss_pred eEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCC
Confidence 55556666778888885 467776665432 2358999999986654 544
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.41 E-value=0.00074 Score=58.18 Aligned_cols=232 Identities=9% Similarity=-0.038 Sum_probs=137.1
Q ss_pred EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc----eeeeEE-ec
Q 021319 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK----CSQQAE-LS 108 (314)
Q Consensus 34 ~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~----~~~~~~-~~ 108 (314)
+|+.+. ...|+..+++.... . .+......+..++|++.++.+.++-...+.|+.+++.... ...... ..
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~--~---~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEY--T---SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSC--E---EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred eeEEec-cceeEEEccCCcce--e---EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 343333 36777777764321 1 1223455678999998766666666677899999886521 111111 12
Q ss_pred CceEEEEEccCCC-EEEEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEc-C-CceEEEEeCCCCCce
Q 021319 109 GENINITYKPDGT-HIAVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTT-G-NGTVEVLTYPSLRPL 184 (314)
Q Consensus 109 ~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~-~g~~~~~~~~~~~~~ 184 (314)
.....+++.+.+. +.++-...+.|.+.++.......... .......++..|.+..++.+. . .+.|...++......
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 3456688887444 44455567788888886543322222 223467888888666555554 3 367888877654332
Q ss_pred eeeeecccceEEEEECCCCCEEEEee-CCCeEEEeeCCCcEEEEEeee--cccCeEEEEEccCCcEEEEecCCceEEEEE
Q 021319 185 DTVVAHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTFTK--LEWPVRTISFSHTGDYIASASEDLFIDISN 261 (314)
Q Consensus 185 ~~~~~~~~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~ 261 (314)
......-..++.|++++++..|..+. ..+.|..+|+........... .-.....++. ..+.++.+....+.|...+
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEE
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEE
Confidence 22222235688999998777666554 457899999864432222221 1123456666 3455666666778899999
Q ss_pred CCCCCeEEEEe
Q 021319 262 VHTGRTVHQIP 272 (314)
Q Consensus 262 ~~~~~~~~~~~ 272 (314)
..+|+.+..+.
T Consensus 318 ~~~G~~~~~i~ 328 (400)
T 3p5b_L 318 RLTGSDVNLLA 328 (400)
T ss_dssp SSSCCCCEEEE
T ss_pred cCCCCceEEEe
Confidence 88887665553
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.39 E-value=9.6e-05 Score=69.18 Aligned_cols=193 Identities=10% Similarity=0.037 Sum_probs=106.1
Q ss_pred CEEEEEEc-CCCCCEEEEEeCCC----cEEEEeCCCC-ceeeeEEecCceEEEEEccCCCEEEEEeCCC-----cEEEEE
Q 021319 68 SVDQLCWD-PKHADLIATASGDK----TVRLWDARSG-KCSQQAELSGENINITYKPDGTHIAVGNRDD-----ELTILD 136 (314)
Q Consensus 68 ~v~~l~~~-~~~~~~l~s~~~D~----~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-----~i~i~d 136 (314)
.+...+|+ |++..++.+.+.+| +|+++|+.++ +.... .+......+.|+||++.|+....+. .|..++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 57788999 98654444444433 5999999988 53211 1111123578999998888776542 466677
Q ss_pred ccCCe----EeeeeccCcceeeEEeccCCCeEEEEc---CCceEEEEeCCCCC-ce--eee-eecccceEEEEECCCCCE
Q 021319 137 VRKFK----PIHRRKFGYEVNEIAWNMTGEMFFLTT---GNGTVEVLTYPSLR-PL--DTV-VAHTAGCYCIAIDPMGRY 205 (314)
Q Consensus 137 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~-~~--~~~-~~~~~~i~~i~~~~~~~~ 205 (314)
+.+.+ .+...........+.|+++++.++... ....+.++++.... .. ..+ .......+.+.|+..+.+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 76542 221111122245678999999887765 34567777775532 12 222 223344566665544445
Q ss_pred EEEeeCC----CeEEEeeCCCcEEEEE-eeeccc--CeEEEEEccCCcEEEEecCCce--EEEEEC
Q 021319 206 FAVGSAD----SLVSLWDISEMLCVRT-FTKLEW--PVRTISFSHTGDYIASASEDLF--IDISNV 262 (314)
Q Consensus 206 l~t~~~d----g~i~vwd~~~~~~~~~-~~~~~~--~v~~~~~sp~~~~l~s~s~d~~--v~v~~~ 262 (314)
++....+ ..|..+|+.+....+. +..+.. .+..+++. .+.++++...|+. +.+++.
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 5555444 2566677654211122 222333 33444443 3445566777775 455564
No 274
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.36 E-value=0.00073 Score=56.26 Aligned_cols=228 Identities=7% Similarity=-0.046 Sum_probs=133.4
Q ss_pred CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeee-EE-ecCceEEEEEcc
Q 021319 41 DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ-AE-LSGENINITYKP 118 (314)
Q Consensus 41 D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~-~~-~~~~~~~~~~~~ 118 (314)
...|+..+++...... ...+.+ .....++.|++.++.+..+-...+.|..++...+..... .. .-.....+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~--~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENA--TIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCC--EEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEE--EEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 3568888876532111 111222 234568899987666777777788999999876532111 11 112345677776
Q ss_pred CCCEE-EEEeCCCcEEEEEccCCeEeeee-ccCcceeeEEeccCCCeEEEEc--CCceEEEEeCCCCCceeeeeecccce
Q 021319 119 DGTHI-AVGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLTT--GNGTVEVLTYPSLRPLDTVVAHTAGC 194 (314)
Q Consensus 119 ~~~~l-~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~i 194 (314)
.+..| ++-...+.|.++++......... ........++..|.+..++.+. ..+.|..++.............-..+
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~P 168 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP 168 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCE
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCc
Confidence 55444 45556678999987643221111 2223467888888655555554 35788888765433222122223457
Q ss_pred EEEEECCCCCEEEEe-eCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe
Q 021319 195 YCIAIDPMGRYFAVG-SADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP 272 (314)
Q Consensus 195 ~~i~~~~~~~~l~t~-~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~ 272 (314)
+.+++++++..|..+ ...+.|..+|+............-.....+++. .+.++.+-...+.|...+..+|+....+.
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 899999976665554 456789999986432211222122345667775 34555566677889999988877655543
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.28 E-value=0.0011 Score=56.76 Aligned_cols=205 Identities=8% Similarity=-0.004 Sum_probs=122.7
Q ss_pred ccEEEEEECCCCCEEE-EeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 21 KKVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~-s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
.....++|++.+..|. +-...+.|..++++... ... .+.........+++++.++.+.++-...+.|.+.++...
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~---~~~-~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN---VEE-VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC---EEE-EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC---cEE-EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 3567889997655544 44466788888775321 111 122222345677888766667777777888999888654
Q ss_pred ceeeeEEe-cCceEEEEEccCCCEEEEEeCC--CcEEEEEccCCeEeeeecc-CcceeeEEeccCCCe-EEEEcCCceEE
Q 021319 100 KCSQQAEL-SGENINITYKPDGTHIAVGNRD--DELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEM-FFLTTGNGTVE 174 (314)
Q Consensus 100 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~ 174 (314)
........ -..+..+++.|.+..|+..... +.|..+++........... ......+++++.+.. +++-...+.|.
T Consensus 192 ~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~ 271 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 271 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEE
T ss_pred ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEE
Confidence 33222221 1346678899877777665543 5677777754322211111 234678999976554 45555678899
Q ss_pred EEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee
Q 021319 175 VLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (314)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~ 230 (314)
.+++........+......+..+++. .+.++.+-...+.|..+|..+++.+..+.
T Consensus 272 ~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 272 RANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 98876543322222233457788883 45555666667889888866665444443
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.27 E-value=0.00012 Score=67.35 Aligned_cols=242 Identities=12% Similarity=0.054 Sum_probs=131.1
Q ss_pred EEEEcCCCCCEEEEEeCCC-----------cEEEEeCCCCceeeeEEecC----ceEEEEEccCCCEEEEEeC-CCcEEE
Q 021319 71 QLCWDPKHADLIATASGDK-----------TVRLWDARSGKCSQQAELSG----ENINITYKPDGTHIAVGNR-DDELTI 134 (314)
Q Consensus 71 ~l~~~~~~~~~l~s~~~D~-----------~v~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~-d~~i~i 134 (314)
.+++.+.++.+++.|+.+. .+.+||..+++......... ....+++..+++.+++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 4455553456777877543 57899998887544332211 1123567789999999884 457999
Q ss_pred EEccCCeEeeeec--cCcceeeEEeccCCCeEEEEc-CC-----ceEEEEeCCCCCceee--e--eecccceEEEEECCC
Q 021319 135 LDVRKFKPIHRRK--FGYEVNEIAWNMTGEMFFLTT-GN-----GTVEVLTYPSLRPLDT--V--VAHTAGCYCIAIDPM 202 (314)
Q Consensus 135 ~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~-----g~~~~~~~~~~~~~~~--~--~~~~~~i~~i~~~~~ 202 (314)
||+.+.+...... ....-..++..+++..+++++ .+ ..+.+|+....+-... . ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 9998765443221 111222344556888888887 33 4677787654321110 0 000000000112234
Q ss_pred CCEEEEeeCCC---------eEEEeeCCCcEEEEEeeecc---------cCeEEEEEc-cCCcEEEEecCCc--------
Q 021319 203 GRYFAVGSADS---------LVSLWDISEMLCVRTFTKLE---------WPVRTISFS-HTGDYIASASEDL-------- 255 (314)
Q Consensus 203 ~~~l~t~~~dg---------~i~vwd~~~~~~~~~~~~~~---------~~v~~~~~s-p~~~~l~s~s~d~-------- 255 (314)
+..++.|+.+| .+..||..+........... ..-.++.|. .++++++.|+.+.
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 45545554443 46788887654333222111 123445554 4788899988542
Q ss_pred ---eEEEEECCCCCeEEEE----eccCccceeEEcCCCCeeEEEecCCcc-cc--cccceEEecccc
Q 021319 256 ---FIDISNVHTGRTVHQI----PCRAAMNSVEWNPKYNLLAYAGDDKNK-YQ--ADEGVFRIYGFE 312 (314)
Q Consensus 256 ---~v~v~~~~~~~~~~~~----~~~~~i~~v~~~~~~~~la~~~~d~~~-~~--~~~~~~~~~~~~ 312 (314)
.+.+||..+..-.... +..-.-.+....|++++++.||.+... |. --..++.+|+.+
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC
Confidence 5778887765433221 111112345667899999999966321 10 012456677654
No 277
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=0.0031 Score=59.27 Aligned_cols=275 Identities=9% Similarity=0.055 Sum_probs=159.2
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEee------cCCCCEEEEEEcCCCCCEEEEEeCCCcEEEE
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR------GHADSVDQLCWDPKHADLIATASGDKTVRLW 94 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iw 94 (314)
..|.++...++|.+.+... + -|.+|+..... ....... -....|.++...+++ .|..|...+-|.++
T Consensus 211 ~~i~~i~~d~~g~lwigt~-~-Gl~~~d~~~~~---~~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~~~Gl~~~ 283 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTS-K-GLALFNANTET---FTNFHNNPGNIHGALSSYIFSIKQLKDN--KLWIATELNGIMIL 283 (781)
T ss_dssp SSEEEEEECTTCCEEEEET-T-EEEEEETTTTE---EEC-----------CCCCEEEEEECTTS--EEEEEESSSCEEEE
T ss_pred CceeEEEEcCCCCEEEEeC-C-cHheECCCCCc---EEEEEcCCCccccccCceEEEEEECCCC--CEEEEeCCCCeEEE
Confidence 4688998888888766543 3 57788865321 1111110 123568888877653 45556665678899
Q ss_pred eCCCCceeeeEE--------------e-cCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeE--eee--------eccC
Q 021319 95 DARSGKCSQQAE--------------L-SGENINITYKPDGTHIAVGNRDDELTILDVRKFKP--IHR--------RKFG 149 (314)
Q Consensus 95 d~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~--------~~~~ 149 (314)
|..++....... + ...+.++...++|. |.+|+.++.|..++...... ... ....
T Consensus 284 ~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 284 DLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSN 362 (781)
T ss_dssp ETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSS
T ss_pred CCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCC
Confidence 987765432211 1 12345666677665 66788788899998764322 110 0112
Q ss_pred cceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeee---eecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEE
Q 021319 150 YEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTV---VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCV 226 (314)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~ 226 (314)
..+.++....++...+ ++.++-+..++....+..... ......|.++..++++++.+ |+.++.+..+|..+++..
T Consensus 363 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWI-GTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SCEEEEEECTTSCEEE-EEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE
T ss_pred cceEEEEEcCCCCEEE-EeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE
Confidence 3466776666666554 444445666665432111000 11235689999998887655 666667999998766543
Q ss_pred EEeee---cccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEec------cCccceeEEcCCCCeeEEEecCCc
Q 021319 227 RTFTK---LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIPC------RAAMNSVEWNPKYNLLAYAGDDKN 297 (314)
Q Consensus 227 ~~~~~---~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~------~~~i~~v~~~~~~~~la~~~~d~~ 297 (314)
.+.. ....|.++...+++.+.+.. .. -+..++..+++....... ...|+++...+++.+.+ |..++.
T Consensus 441 -~~~~~~~~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~G 516 (781)
T 3v9f_A 441 -IIELEKNELLDVRVFYEDKNKKIWIGT-HA-GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGG 516 (781)
T ss_dssp -ECCSTTTCCCCEEEEEECTTSEEEEEE-TT-EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSC
T ss_pred -EeccCCCCCCeEEEEEECCCCCEEEEE-CC-ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCC
Confidence 3321 23568899988888876644 34 588888877654332211 24688888888887654 443344
Q ss_pred cccc--ccceEEec
Q 021319 298 KYQA--DEGVFRIY 309 (314)
Q Consensus 298 ~~~~--~~~~~~~~ 309 (314)
++.. +.+.++.|
T Consensus 517 l~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 517 VGIYTPDMQLVRKF 530 (781)
T ss_dssp EEEECTTCCEEEEE
T ss_pred EEEEeCCCCeEEEc
Confidence 5443 34555554
No 278
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.25 E-value=0.0014 Score=54.79 Aligned_cols=265 Identities=9% Similarity=0.044 Sum_probs=140.1
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeE-EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~ 98 (314)
...+.+|.|.+++..++ ++.++.| |........+.... ........+.++.+.+ +..++ ++.++.|.. ..+.
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~-~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWI-VGEPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEE-EEETTEEEE-ESST
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEE-EECCCeEEE-ECCC
Confidence 34799999988777777 4556754 33333222222211 1111244678888876 23444 455665543 3333
Q ss_pred CceeeeEE----ecCceEEEEEccCCCEEEEEeCCCcEE-EEE-ccCCeEeeeeccCcceeeEEeccCCCeEEEEcCCce
Q 021319 99 GKCSQQAE----LSGENINITYKPDGTHIAVGNRDDELT-ILD-VRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTTGNGT 172 (314)
Q Consensus 99 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d~~i~-i~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 172 (314)
|+--.... +......+.+.+++..++++ .++.+. -.| -++.+.+.. .....+..+.+.+++..++++.. |.
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~-~~~~~~~~~~~~~~~~~~~~g~~-G~ 184 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQ-EAIGVMRNLNRSPSGEYVAVSSR-GS 184 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEEC-SCCCCEEEEEECTTSCEEEEETT-SS
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeec-CCCcceEEEEEcCCCcEEEEECC-Cc
Confidence 43222111 12334556666666666555 445443 223 223333322 12234667888888777766544 44
Q ss_pred EEEE-eC--CCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeee----cccCeEEEEEccCC
Q 021319 173 VEVL-TY--PSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTK----LEWPVRTISFSHTG 245 (314)
Q Consensus 173 ~~~~-~~--~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~~~~sp~~ 245 (314)
+..- +. ...+++. ......+..++++++++.++. +.+|.+.+.+...++.-..+.. ....+.++++.|++
T Consensus 185 ~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~ 261 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN 261 (327)
T ss_dssp EEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSS
T ss_pred EEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCC
Confidence 4332 22 1112221 123456788999999887654 4578777764333433222221 12347889999988
Q ss_pred cEEEEecCCceEEEEECCCCCeEEEEec----cCccceeEEcCCCCeeEEEecCCcccc
Q 021319 246 DYIASASEDLFIDISNVHTGRTVHQIPC----RAAMNSVEWNPKYNLLAYAGDDKNKYQ 300 (314)
Q Consensus 246 ~~l~s~s~d~~v~v~~~~~~~~~~~~~~----~~~i~~v~~~~~~~~la~~~~d~~~~~ 300 (314)
.+++.+. ++.+. +....|+.-..+.. ...+++|.|.+++. ++.+|.++.++.
T Consensus 262 ~~~~~g~-~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~ 317 (327)
T 2xbg_A 262 EVWLAGG-AGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLR 317 (327)
T ss_dssp CEEEEES-TTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEE
T ss_pred EEEEEeC-CCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEE
Confidence 8777665 56553 33444544333321 24678999976555 445666765443
No 279
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.24 E-value=0.0008 Score=55.62 Aligned_cols=204 Identities=10% Similarity=0.136 Sum_probs=127.6
Q ss_pred EeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecC---------ceEEEEE---ccCCCEEEEEe-
Q 021319 61 ELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSG---------ENINITY---KPDGTHIAVGN- 127 (314)
Q Consensus 61 ~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~l~~~~- 127 (314)
.+........+..|++..+.+.++.-..++|..||...+..... .... ....+.+ .|+++++++..
T Consensus 7 ~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~ 85 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN 85 (334)
T ss_dssp EECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred EecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence 34444445567899887655555555799999999976644333 2221 2356888 68877777644
Q ss_pred ------------CCCcEEEEEcc---CCeEeeeeccC--------------cceeeEEeccCCCeEEEEcCC-ceEEEEe
Q 021319 128 ------------RDDELTILDVR---KFKPIHRRKFG--------------YEVNEIAWNMTGEMFFLTTGN-GTVEVLT 177 (314)
Q Consensus 128 ------------~d~~i~i~d~~---~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 177 (314)
.+..+..+|+. +.+.+...... .....++..++|+.+++.+.. +.|..++
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 25679999998 66665443321 236788999999999988877 7777666
Q ss_pred CCCCCceeeeee------cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEE--EEEee--ec--c-cCeEEE-EEcc
Q 021319 178 YPSLRPLDTVVA------HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC--VRTFT--KL--E-WPVRTI-SFSH 243 (314)
Q Consensus 178 ~~~~~~~~~~~~------~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~--~~~~~--~~--~-~~v~~~-~~sp 243 (314)
.... .+..+.. .....+.|+++|+|+.|++....|.+..+|+.+... +. .. +. . .....+ .--.
T Consensus 166 pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~ 243 (334)
T 2p9w_A 166 ADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPV 243 (334)
T ss_dssp TTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEE
T ss_pred CCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCccccccccc
Confidence 5433 2222211 122367999999999888887799999999875432 21 11 11 0 112332 3334
Q ss_pred CCcE-EEEecCCceEEEEECCCCCe
Q 021319 244 TGDY-IASASEDLFIDISNVHTGRT 267 (314)
Q Consensus 244 ~~~~-l~s~s~d~~v~v~~~~~~~~ 267 (314)
+|+. |++.+..+.+.+.+....+.
T Consensus 244 ~G~vllV~~~~~~~~~l~S~DgW~s 268 (334)
T 2p9w_A 244 GNESVLVGARAPYAISFRSWDNWKS 268 (334)
T ss_dssp TTEEEEEEEETTEEEEEECSSTTSE
T ss_pred CCEEEEEEcCCCCEEEEECCCCcce
Confidence 6776 56666676666665544333
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.16 E-value=0.0021 Score=53.38 Aligned_cols=175 Identities=9% Similarity=0.003 Sum_probs=108.2
Q ss_pred CcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEE-eCCCcEEEEEccC----CeEeeeecc-CcceeeEEeccC-C
Q 021319 89 KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVG-NRDDELTILDVRK----FKPIHRRKF-GYEVNEIAWNMT-G 161 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~----~~~~~~~~~-~~~~~~~~~~~~-~ 161 (314)
..|+..|+.................++|.+++..|+.. ...+.|..+++.. ......... ......+++.+. +
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 56888898877655544445567789999876666554 4567899998865 111111111 134567788754 4
Q ss_pred CeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeC-C-CeEEEeeCCCcEEEEEe-eecccCeEE
Q 021319 162 EMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSA-D-SLVSLWDISEMLCVRTF-TKLEWPVRT 238 (314)
Q Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~-d-g~i~vwd~~~~~~~~~~-~~~~~~v~~ 238 (314)
..+++-...+.|.+++................+..++++|.+..|+.+.. . +.|...++.... .+.+ ...-.....
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~g 168 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNG 168 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceE
Confidence 55566677889999887654322222223356889999986665544443 3 688888875432 2222 111234678
Q ss_pred EEEccCCcEEEEe-cCCceEEEEECCC
Q 021319 239 ISFSHTGDYIASA-SEDLFIDISNVHT 264 (314)
Q Consensus 239 ~~~sp~~~~l~s~-s~d~~v~v~~~~~ 264 (314)
++++|++..|..+ +..+.|..++...
T Consensus 169 la~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 169 ITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEeccCCEEEEEECCCCeEEEEecCC
Confidence 9999987665544 5667899999864
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.16 E-value=0.0024 Score=53.90 Aligned_cols=203 Identities=8% Similarity=-0.004 Sum_probs=121.3
Q ss_pred cEEEEEECCCCCEEE-EeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 021319 22 KVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (314)
Q Consensus 22 ~V~~v~~s~~g~~l~-s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~ 100 (314)
....++|++....|. +-...+.|..++++... ... .+.........+++++.++.+.++-...+.|.+.+.....
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~---~~~-~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSN---VEE-VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEE-EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCC---ceE-EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 467889987665554 44466778888775422 111 1222223456788887666677777778899999987543
Q ss_pred eeeeEEe-cCceEEEEEccCCCEEEEEeC-C-CcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeE-EEEcCCceEEE
Q 021319 101 CSQQAEL-SGENINITYKPDGTHIAVGNR-D-DELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMF-FLTTGNGTVEV 175 (314)
Q Consensus 101 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 175 (314)
....... -..+..+++.|.+..|+.... . +.|..+++.......... .......+++++.+..+ ++-...+.|..
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 3222211 234667889987666665544 3 668888775432211111 12346789999765554 44456788998
Q ss_pred EeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 176 LTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
+++........+......+..+++. .+...++-...+.|..+|..+++.+..+
T Consensus 230 ~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 230 ANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 8876543222222233456788883 4555556666778888886555544444
No 282
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.13 E-value=0.0035 Score=54.55 Aligned_cols=234 Identities=9% Similarity=0.056 Sum_probs=132.1
Q ss_pred ccEEEEEECCC--CCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCC---Cc-EEEE
Q 021319 21 KKVHSVAWNCT--GTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGD---KT-VRLW 94 (314)
Q Consensus 21 ~~V~~v~~s~~--g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D---~~-v~iw 94 (314)
.....|+|+|+ ...|..+...+.|+.++.+.. .+. .+.........+++++++. ++++-... .. +...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g---~v~--~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ---YVD--IKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTT---EEE--EECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCC---EEE--EeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEE
Confidence 34678999985 344444444488888887532 222 2333445688999999865 65554321 12 2223
Q ss_pred eCCCCce-eeeEEecCceEEEEEcc-CCCEEEEEeCCCcEEEEEccCCeEeee---eccCcceeeEEeccCCC-eEEEEc
Q 021319 95 DARSGKC-SQQAELSGENINITYKP-DGTHIAVGNRDDELTILDVRKFKPIHR---RKFGYEVNEIAWNMTGE-MFFLTT 168 (314)
Q Consensus 95 d~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~ 168 (314)
+...+.. ............+++.| ++.+.++-..++.|..+|......... .........++++++++ ++++-.
T Consensus 213 ~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 213 TRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp CGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred ECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 3221111 01111123344577888 666555555677899999875443111 11111234589999998 555556
Q ss_pred CCceEEEEeCCCCC-c---eeeeeec---------------ccceEEEEE---------CCCCCEEEEeeCCCeEEEeeC
Q 021319 169 GNGTVEVLTYPSLR-P---LDTVVAH---------------TAGCYCIAI---------DPMGRYFAVGSADSLVSLWDI 220 (314)
Q Consensus 169 ~~g~~~~~~~~~~~-~---~~~~~~~---------------~~~i~~i~~---------~~~~~~l~t~~~dg~i~vwd~ 220 (314)
..+.|..+++.... . ...+.+. -..+..+++ ++++.+.++-..++.|+.++.
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 77889888764211 1 1122111 123677999 778877777777789999985
Q ss_pred CCcEEEEEeeecc------------------cCeEEEEEc-cCCcEEEEecCCceEEEEEC
Q 021319 221 SEMLCVRTFTKLE------------------WPVRTISFS-HTGDYIASASEDLFIDISNV 262 (314)
Q Consensus 221 ~~~~~~~~~~~~~------------------~~v~~~~~s-p~~~~l~s~s~d~~v~v~~~ 262 (314)
++.. .++.+.. .....|+++ +++.++++=.....|+..+.
T Consensus 373 -~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 373 -EGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp -TSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred -CCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 4543 3332210 125668888 55666655556666666654
No 283
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.12 E-value=0.0004 Score=65.01 Aligned_cols=183 Identities=13% Similarity=0.081 Sum_probs=101.7
Q ss_pred eEEEEEc-cCCCEEEEEeC-CC----cEEEEEccCC-eEeeeeccCcceeeEEeccCCCeEEEEcCC-----ceEEEEeC
Q 021319 111 NINITYK-PDGTHIAVGNR-DD----ELTILDVRKF-KPIHRRKFGYEVNEIAWNMTGEMFFLTTGN-----GTVEVLTY 178 (314)
Q Consensus 111 ~~~~~~~-~~~~~l~~~~~-d~----~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~ 178 (314)
.....|+ |||++|+.+.. +| .|.++|+.+. +.+.. ........+.|+|+++.++....+ ..+..+++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 3467899 99998885543 33 3999999876 53211 111123568899999877766543 25666666
Q ss_pred CCCCce--eeee-ecccceEEEEECCCCCEEEEeeC---CCeEEEeeCCCc--EE-EEEe-eecccCeEEEEEccCCcEE
Q 021319 179 PSLRPL--DTVV-AHTAGCYCIAIDPMGRYFAVGSA---DSLVSLWDISEM--LC-VRTF-TKLEWPVRTISFSHTGDYI 248 (314)
Q Consensus 179 ~~~~~~--~~~~-~~~~~i~~i~~~~~~~~l~t~~~---dg~i~vwd~~~~--~~-~~~~-~~~~~~v~~~~~sp~~~~l 248 (314)
.+.... ..+. ........+.|+|||++|+..+. ...|.++|+.++ .. +..+ ........++.|+.++.++
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLV 334 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEE
Confidence 554322 1121 12233567889999998876553 336888888764 22 1223 2233444555555445555
Q ss_pred EEecCC----ceEEEEECCCC-CeEE-EEeccC--ccceeEEcCCCCeeEEEecC
Q 021319 249 ASASED----LFIDISNVHTG-RTVH-QIPCRA--AMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 249 ~s~s~d----~~v~v~~~~~~-~~~~-~~~~~~--~i~~v~~~~~~~~la~~~~d 295 (314)
+....+ ..|..++..++ .... .+.+.. .+..+++.. +.++++...|
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~ 388 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRA 388 (751)
T ss_dssp EEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-SEEEEEEEET
T ss_pred EEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeC
Confidence 554443 36777777653 2122 233322 355666652 3344444444
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.0027 Score=53.00 Aligned_cols=199 Identities=15% Similarity=0.205 Sum_probs=122.5
Q ss_pred EEEEcCCC--CCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEcc----CCC---EEEEEeC---CCcEEEEEcc
Q 021319 71 QLCWDPKH--ADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKP----DGT---HIAVGNR---DDELTILDVR 138 (314)
Q Consensus 71 ~l~~~~~~--~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~---d~~i~i~d~~ 138 (314)
++..+|.+ ..+++.....+-+.++|+ +|+.++.+.. +....+...| .|+ ++++... ++++.+|++.
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 34444542 356777778899999999 6777666543 3333444333 233 2333333 4789999662
Q ss_pred -CCeEeeeec-------cC-cceeeEEe--ccC-CC-eEEEEcCCceEEEEeCC---CC----CceeeeeecccceEEEE
Q 021319 139 -KFKPIHRRK-------FG-YEVNEIAW--NMT-GE-MFFLTTGNGTVEVLTYP---SL----RPLDTVVAHTAGCYCIA 198 (314)
Q Consensus 139 -~~~~~~~~~-------~~-~~~~~~~~--~~~-~~-~~~~~~~~g~~~~~~~~---~~----~~~~~~~~~~~~i~~i~ 198 (314)
...++.... .. ..+..++. ++. +. ++++...+|.+..|.+. .. +.++++. ..+.+..+.
T Consensus 108 p~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~Egcv 186 (355)
T 3amr_A 108 GKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMA 186 (355)
T ss_dssp TTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEE
T ss_pred CCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEE
Confidence 222233321 11 44555555 553 43 56777788999888762 22 2334443 345688899
Q ss_pred ECCCCCEEEEeeCCCeEEEeeCC-----CcEEEEEee--ecccCeEEEEE--ccCCc-EEEEec-CCceEEEEECC-CCC
Q 021319 199 IDPMGRYFAVGSADSLVSLWDIS-----EMLCVRTFT--KLEWPVRTISF--SHTGD-YIASAS-EDLFIDISNVH-TGR 266 (314)
Q Consensus 199 ~~~~~~~l~t~~~dg~i~vwd~~-----~~~~~~~~~--~~~~~v~~~~~--sp~~~-~l~s~s-~d~~v~v~~~~-~~~ 266 (314)
.++....|+.+-.+..|..+|.+ +.+.+..+. .....+..|++ .++++ ||+.++ .+....|||.. +.+
T Consensus 187 vDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 187 ADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp EETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCC
T ss_pred EcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCc
Confidence 99988899999888777777754 345555442 22346788887 55655 666666 56789999996 677
Q ss_pred eEEEEe
Q 021319 267 TVHQIP 272 (314)
Q Consensus 267 ~~~~~~ 272 (314)
.+..+.
T Consensus 267 ~vg~f~ 272 (355)
T 3amr_A 267 YVADFR 272 (355)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777664
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.11 E-value=0.0027 Score=52.69 Aligned_cols=223 Identities=10% Similarity=-0.002 Sum_probs=132.4
Q ss_pred CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC----CceeeeEEe-cCceEEEEE
Q 021319 42 QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS----GKCSQQAEL-SGENINITY 116 (314)
Q Consensus 42 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~----~~~~~~~~~-~~~~~~~~~ 116 (314)
..|+..+++.... .. +......+..+.|++.++.+.++-...+.|..++... ......... -.....+++
T Consensus 10 ~~I~~i~~~~~~~---~~--~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 84 (316)
T 1ijq_A 10 HEVRKMTLDRSEY---TS--LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 84 (316)
T ss_dssp SSEEEEETTSCCC---EE--EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred CeEEEEECCCcce---Ee--hhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEE
Confidence 4578878765321 11 1223455788999987666777777789999999875 221111111 123456778
Q ss_pred ccCCCEE-EEEeCCCcEEEEEccCCeEeeeec-cCcceeeEEeccCCCeEEEEc-CC-ceEEEEeCCCCCceeeee-ecc
Q 021319 117 KPDGTHI-AVGNRDDELTILDVRKFKPIHRRK-FGYEVNEIAWNMTGEMFFLTT-GN-GTVEVLTYPSLRPLDTVV-AHT 191 (314)
Q Consensus 117 ~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~-~~~ 191 (314)
.+.+..| ++-...+.|.++++.......... .......++..|.+..++.+. .. +.|..++..... ...+. ..-
T Consensus 85 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~ 163 (316)
T 1ijq_A 85 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENI 163 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSC
T ss_pred eecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCC
Confidence 7655545 455667889999986543221111 224567888888665555444 33 678777765432 22221 223
Q ss_pred cceEEEEECCCCCEEEEee-CCCeEEEeeCCCcEEEEEeee---cccCeEEEEEccCCcEEEEecCCceEEEEECCCCCe
Q 021319 192 AGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTFTK---LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 267 (314)
Q Consensus 192 ~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~ 267 (314)
..++.+++++++..|..+. ..+.|..+|+.... .+.+.. .-.....+++. .+.++.+-...+.|...+..+|+.
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcc
Confidence 4578999998776665554 55789999986422 222211 11235667774 466666777788999999877776
Q ss_pred EEEEe
Q 021319 268 VHQIP 272 (314)
Q Consensus 268 ~~~~~ 272 (314)
+..+.
T Consensus 242 ~~~i~ 246 (316)
T 1ijq_A 242 VNLLA 246 (316)
T ss_dssp CEEEE
T ss_pred eEEEe
Confidence 65553
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.08 E-value=0.0032 Score=52.35 Aligned_cols=205 Identities=7% Similarity=-0.043 Sum_probs=123.3
Q ss_pred ccEEEEEECCCCCE-EEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 21 KKVHSVAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 21 ~~V~~v~~s~~g~~-l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
..+..++|.+.+.. +.+-...+.|..++.+..... ...+.........+++.+.++.+.++-...+.|.+.+....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~---~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC---CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce---EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 34668889886544 455456778888887643211 11122223445678888766667777777889999998654
Q ss_pred ceeeeE-EecCceEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeeee-ccCcceeeEEeccCCCeE-EEEcCCceEE
Q 021319 100 KCSQQA-ELSGENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMF-FLTTGNGTVE 174 (314)
Q Consensus 100 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~g~~~ 174 (314)
...... .....+..+++.|.+..|+.... .+.|...++.......-. ..-...+.+++++.+..+ ++-...+.|.
T Consensus 112 ~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 112 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 322222 12234667888887777766653 467888877532211111 112346789999865544 4555678899
Q ss_pred EEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 175 VLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
.+++...............+..+++.. +.++.+-...+.|..+|..+++....+
T Consensus 192 ~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEE
Confidence 998865332222222334567888863 445555666788999998766544444
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.99 E-value=0.0061 Score=52.43 Aligned_cols=220 Identities=9% Similarity=-0.026 Sum_probs=130.2
Q ss_pred cccEEEEEECCCCCEEEEe-eCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 021319 20 KKKVHSVAWNCTGTKLASG-SVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~-~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~ 98 (314)
...+..|+|++....|.-+ ...+.|+.++++...........+.........+++++.++++.++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4567889999866554444 456788888775311000111122223456778888876666777777788999999876
Q ss_pred CceeeeEE-ecCceEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeeeecc-CcceeeEEeccCCCeEEEE-cCCceE
Q 021319 99 GKCSQQAE-LSGENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLT-TGNGTV 173 (314)
Q Consensus 99 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~g~~ 173 (314)
........ .-..+..+++.|.+..|+.... .+.|...++........... -.....+++++.+..++.+ ...+.|
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I 270 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 270 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEE
Confidence 54433332 2234677899997777766653 36788888764322221111 2456789999766655554 567889
Q ss_pred EEEeCCCCCceeeeee--cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEE
Q 021319 174 EVLTYPSLRPLDTVVA--HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTIS 240 (314)
Q Consensus 174 ~~~~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~ 240 (314)
..+++........... ....+..+++. .+.++.+-...+.|..+|..++..+..+.........|.
T Consensus 271 ~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 271 SSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp EEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred EEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEE
Confidence 9998865433222221 22346677774 344555666677899999777765555543322334443
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.98 E-value=0.0075 Score=53.03 Aligned_cols=197 Identities=16% Similarity=0.175 Sum_probs=117.3
Q ss_pred EEEEEEcCC-CCCEEEEEeCCCcEEEEeCCCCceeeeEEec----CceEEEEE-------ccCCCEEEEEeCCC------
Q 021319 69 VDQLCWDPK-HADLIATASGDKTVRLWDARSGKCSQQAELS----GENINITY-------KPDGTHIAVGNRDD------ 130 (314)
Q Consensus 69 v~~l~~~~~-~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~----~~~~~~~~-------~~~~~~l~~~~~d~------ 130 (314)
...|+++|. +++++++-...+.|++.|...+......... .....++| ++++..|++....+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 567899983 4556666665678999999887765544332 23677999 99999777776554
Q ss_pred -cEEEEEccC-CeEe-----eeeccCcceeeEEecc-CCCeEEEEcCCceEEEEeCC-------CCCc-----------e
Q 021319 131 -ELTILDVRK-FKPI-----HRRKFGYEVNEIAWNM-TGEMFFLTTGNGTVEVLTYP-------SLRP-----------L 184 (314)
Q Consensus 131 -~i~i~d~~~-~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~-------~~~~-----------~ 184 (314)
.+.+++... .... ...........++.+| ++.++++-...+.+..++.. .... .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~ 300 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF 300 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred ceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence 255665332 1111 1111123456778888 45666677788899999876 3321 1
Q ss_pred eeee--ecccceEEEEECCCCCEEEEee-CCCeEEEeeCC--CcEE--EEEeeec----------------ccCeEEEEE
Q 021319 185 DTVV--AHTAGCYCIAIDPMGRYFAVGS-ADSLVSLWDIS--EMLC--VRTFTKL----------------EWPVRTISF 241 (314)
Q Consensus 185 ~~~~--~~~~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~--~~~~--~~~~~~~----------------~~~v~~~~~ 241 (314)
..+. ......+.++|+|+|+.|..+. ....|+.++.. .... ...+-+. ..|-..++.
T Consensus 301 ~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~v 380 (496)
T 3kya_A 301 KQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFV 380 (496)
T ss_dssp EEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEE
T ss_pred ceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEE
Confidence 1211 1234568999999999655554 55788886653 3321 0122111 112113444
Q ss_pred c-------cCCcEEEEecCCceEEEEECCCCC
Q 021319 242 S-------HTGDYIASASEDLFIDISNVHTGR 266 (314)
Q Consensus 242 s-------p~~~~l~s~s~d~~v~v~~~~~~~ 266 (314)
. +++.+.++=+....|+.++ .+|.
T Consensus 381 d~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~ 411 (496)
T 3kya_A 381 KNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI 411 (496)
T ss_dssp ECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB
T ss_pred ccccccccCCCeEEEEECCCCEEEEEe-CCCC
Confidence 4 4566666667778888887 4554
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.96 E-value=0.0059 Score=51.49 Aligned_cols=226 Identities=15% Similarity=0.121 Sum_probs=119.5
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEee---cCCCCEEEEEEcCC---CCCEEEEEeCC-----
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR---GHADSVDQLCWDPK---HADLIATASGD----- 88 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~---~h~~~v~~l~~~~~---~~~~l~s~~~D----- 88 (314)
-..-..++|.|+|.++++ ..++.|++++ + .. ......+. ........++++|+ ++.+.++-...
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~-g~--~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR-E-GR--LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE-T-TE--EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE-C-CC--ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 445679999999986665 4568888887 2 11 11111111 12345788999997 44455544432
Q ss_pred CcEEEEeCCCCcee---eeEE-ec---C---ceEEEEEccCCCEEEEEeCC-------------CcEEEEEccCCe----
Q 021319 89 KTVRLWDARSGKCS---QQAE-LS---G---ENINITYKPDGTHIAVGNRD-------------DELTILDVRKFK---- 141 (314)
Q Consensus 89 ~~v~iwd~~~~~~~---~~~~-~~---~---~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~---- 141 (314)
..|..++...+... .... +. . ....++|.|||.+.++.+.. +.|.-++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 67778877644221 1111 11 1 12368899999766554321 345555543210
Q ss_pred --------EeeeeccC-cceeeEEecc-CCCeEEEEcCCce--------EEEEeCCC----------------CCceeee
Q 021319 142 --------PIHRRKFG-YEVNEIAWNM-TGEMFFLTTGNGT--------VEVLTYPS----------------LRPLDTV 187 (314)
Q Consensus 142 --------~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~g~--------~~~~~~~~----------------~~~~~~~ 187 (314)
.......+ .....++|++ .+.++++-...+. +....... ..++..+
T Consensus 185 pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 00000011 2256678888 6676666554443 44332111 0122222
Q ss_pred eecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE----E--EEEeeecccCeEEEEEccCCcEEEEec
Q 021319 188 VAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML----C--VRTFTKLEWPVRTISFSHTGDYIASAS 252 (314)
Q Consensus 188 ~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~----~--~~~~~~~~~~v~~~~~sp~~~~l~s~s 252 (314)
.+...+..++| .+|.++++.-..+.|...++.... . ...+...-..+..+++.|||.+.++..
T Consensus 265 -~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 -PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp -TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 12234667777 467777666666778877765321 1 122222224678899999997766553
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=0.0088 Score=52.61 Aligned_cols=240 Identities=10% Similarity=0.046 Sum_probs=133.0
Q ss_pred cEEEEEECCC-C-CEEEEeeCCCcEEEeecCCCCCCceeeEEeec--CCCCEEEEEE-------cCCCCCEEEEEeCCC-
Q 021319 22 KVHSVAWNCT-G-TKLASGSVDQTARVWHIEPHGHGKVKDIELRG--HADSVDQLCW-------DPKHADLIATASGDK- 89 (314)
Q Consensus 22 ~V~~v~~s~~-g-~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~--h~~~v~~l~~-------~~~~~~~l~s~~~D~- 89 (314)
....|+|+|+ . +++++-...+.|++.|.+.. .+..+.-.+ .......++| ++++..++++-..++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~---~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNR---MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTT---EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCC---EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 4678899984 4 44555444567777776542 222211111 2235789999 887643554444432
Q ss_pred -----cEEEEeCCC-Ccee-----eeEEecCceEEEEEccCC-CEEEEEeCCCcEEEEEcc-------CCeE--------
Q 021319 90 -----TVRLWDARS-GKCS-----QQAELSGENINITYKPDG-THIAVGNRDDELTILDVR-------KFKP-------- 142 (314)
Q Consensus 90 -----~v~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~-------~~~~-------- 142 (314)
.|.+.+... +... ...........++.+|++ .++++-..++.|..+|+. +...
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred cccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 256666443 2321 122222344567888954 445556677779999987 3322
Q ss_pred ------eeeeccCcceeeEEeccCCCe-EEEEcCCceEEEEeCCCCC-ce---eeeeec---------------ccceE-
Q 021319 143 ------IHRRKFGYEVNEIAWNMTGEM-FFLTTGNGTVEVLTYPSLR-PL---DTVVAH---------------TAGCY- 195 (314)
Q Consensus 143 ------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~-~~---~~~~~~---------------~~~i~- 195 (314)
+...........++++|+++. +++-.....|+.++..... .+ ..+.+. -..+.
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 111222234568999999995 5555677888887653321 11 122221 01244
Q ss_pred EEEEC-------CCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc------------------------cCeEEEEEccC
Q 021319 196 CIAID-------PMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE------------------------WPVRTISFSHT 244 (314)
Q Consensus 196 ~i~~~-------~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~------------------------~~v~~~~~sp~ 244 (314)
.++.+ +++.+.++-..+..|+.++. ++. +.++-+.. .....|+++++
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 45554 45666666666789999994 553 34443210 12456777775
Q ss_pred -CcEEEEecCCceEEEEECCCCC
Q 021319 245 -GDYIASASEDLFIDISNVHTGR 266 (314)
Q Consensus 245 -~~~l~s~s~d~~v~v~~~~~~~ 266 (314)
+.+.++=+....|+.+++....
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECCCC
T ss_pred CCEEEEEeCCCCEEEEEECCCCc
Confidence 6655555666677776665433
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.93 E-value=0.0041 Score=51.87 Aligned_cols=172 Identities=13% Similarity=0.185 Sum_probs=108.2
Q ss_pred CCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccC----CC---eEEEEc-C--CceEEEEeCC-CCCceeee
Q 021319 119 DGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMT----GE---MFFLTT-G--NGTVEVLTYP-SLRPLDTV 187 (314)
Q Consensus 119 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~-~--~g~~~~~~~~-~~~~~~~~ 187 (314)
....++.....+.+.+||+ ..+.+..... ...+.+..-|. +. ..+++. . ++++.+|.+. ...++..+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 3345555667778999999 7777666544 34555544442 22 233333 3 5789999774 22334433
Q ss_pred ee------cc-cceEEEEE--CCC-CC-EEEEeeCCCeEEEeeCC-------CcEEEEEeeecccCeEEEEEccCCcEEE
Q 021319 188 VA------HT-AGCYCIAI--DPM-GR-YFAVGSADSLVSLWDIS-------EMLCVRTFTKLEWPVRTISFSHTGDYIA 249 (314)
Q Consensus 188 ~~------~~-~~i~~i~~--~~~-~~-~l~t~~~dg~i~vwd~~-------~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 249 (314)
.. .. ..++.+++ +|. ++ ++++...+|.+..|++. +.+.++++... ..+..+...+...+|+
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEE
Confidence 11 11 45677777 774 54 67788889999999983 33556666543 4678888999999999
Q ss_pred EecCCceEEEEECC-----CCCeEEEEecc---CccceeEE--cCCCC-eeEEEe
Q 021319 250 SASEDLFIDISNVH-----TGRTVHQIPCR---AAMNSVEW--NPKYN-LLAYAG 293 (314)
Q Consensus 250 s~s~d~~v~v~~~~-----~~~~~~~~~~~---~~i~~v~~--~~~~~-~la~~~ 293 (314)
.+-+|.-|..++.+ +++.+..+... ..+..++. .+++. +|+.++
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 99999778888854 23444444322 35677777 45555 555555
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.92 E-value=0.015 Score=54.55 Aligned_cols=209 Identities=10% Similarity=-0.023 Sum_probs=122.5
Q ss_pred cccEEEEEECCCCC-EEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC
Q 021319 20 KKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARS 98 (314)
Q Consensus 20 ~~~V~~v~~s~~g~-~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~ 98 (314)
...+..|+|.+... ++++-...+.|+.++++...........+.........|++++.++++.++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 34567888988554 45555566778888775321100111122323455678888877667777878889999999875
Q ss_pred CceeeeEE-ecCceEEEEEccCCCEEEEEeCC--CcEEEEEccCCeEeeeecc-CcceeeEEeccCCCeEEEE-cCCceE
Q 021319 99 GKCSQQAE-LSGENINITYKPDGTHIAVGNRD--DELTILDVRKFKPIHRRKF-GYEVNEIAWNMTGEMFFLT-TGNGTV 173 (314)
Q Consensus 99 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~g~~ 173 (314)
........ .-..+..+++.|.+..|+..... +.|...++........... ......+++.+....++++ ...+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 54333222 12346779999987777666542 5788888765433222222 2356788888665555444 566788
Q ss_pred EEEeCCCCCceeeeee--cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 174 EVLTYPSLRPLDTVVA--HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 174 ~~~~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
..+++........+.. .-.....|++.. ++++++-...+.|...|..++..+..+
T Consensus 583 ~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 8888765443322222 123456777743 344445556678888886665444333
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.90 E-value=0.013 Score=53.38 Aligned_cols=226 Identities=6% Similarity=-0.064 Sum_probs=125.0
Q ss_pred CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceee-eEEec-CceEEEEEcc
Q 021319 41 DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQ-QAELS-GENINITYKP 118 (314)
Q Consensus 41 D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~-~~~~~-~~~~~~~~~~ 118 (314)
...|+..+++...... . .+......+..+++++.++.++++=...+.|..+++....... ..... ..+..+++.+
T Consensus 17 ~~~I~~i~~~~~~~~~--~-~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~ 93 (619)
T 3s94_A 17 RRDLRLVDATNGKENA--T-IVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 93 (619)
T ss_dssp SSBEEEECCC------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEET
T ss_pred cccEEEEeCCCCcceE--E-EEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe
Confidence 3567776665321000 1 1112234467889998766666666667888888886542211 11111 3466788888
Q ss_pred CCCEEEE-EeCCCcEEEEEccCCeEeeee-ccCcceeeEEeccCCCeEEEEcC--CceEEEEeCCCCCceeeeeecccce
Q 021319 119 DGTHIAV-GNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLTTG--NGTVEVLTYPSLRPLDTVVAHTAGC 194 (314)
Q Consensus 119 ~~~~l~~-~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~i 194 (314)
.+..|+. -...+.|.+.++.......-. ........++..|....++.+.. .+.+...++...............+
T Consensus 94 ~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P 173 (619)
T 3s94_A 94 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP 173 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSE
T ss_pred cCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCC
Confidence 6655554 456678999988654221111 22235678888887665555542 4677766665433322222234568
Q ss_pred EEEEECCCCCEEEEee-CCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEE
Q 021319 195 YCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQ 270 (314)
Q Consensus 195 ~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~ 270 (314)
+.+++++++..|..+. ..+.|...|+............-.....+++..+ ....+-...+.|...|..+|+....
T Consensus 174 ~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 174 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred cEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEE
Confidence 8999999766655554 4568999998654332222211112245666655 4555555678899999887765433
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.87 E-value=0.0081 Score=50.06 Aligned_cols=224 Identities=12% Similarity=0.090 Sum_probs=116.1
Q ss_pred CCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEe-----cCceEEEEEccCCCEEEEEeCCCcEEEE-E-cc
Q 021319 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-----SGENINITYKPDGTHIAVGNRDDELTIL-D-VR 138 (314)
Q Consensus 66 ~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~i~-d-~~ 138 (314)
...+.++.+.+. +..++ ++.++.| +.....|+--..... ......+.+.+ +..+++ +..+.+..- | -+
T Consensus 35 ~~~~~~v~~~~~-~~~~~-~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~-g~~g~i~~S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDR-HHGWL-VGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIV-GEPPIMLHTTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSS-SCEEE-EETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEE-EETTEEEEESSTTS
T ss_pred CCcEEEEEECCC-CcEEE-EcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEE-ECCCeEEEECCCCC
Confidence 346888888654 34555 5566765 333444432111111 12345677765 444444 445544332 1 23
Q ss_pred CCeEeeee-ccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCcee-eeeecccceEEEEECCCCCEEEEeeCCCeEE
Q 021319 139 KFKPIHRR-KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLD-TVVAHTAGCYCIAIDPMGRYFAVGSADSLVS 216 (314)
Q Consensus 139 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~ 216 (314)
+.+.+... ........+....++..++++ ..|.+..-. ...+.-. ........+..+++.+++++++.+...+..+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~ 187 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTK-DSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS 187 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEES-STTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEc-CCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence 33333221 112234556655556555544 455443221 1121111 1123345688999999999888776555555
Q ss_pred EeeC--CCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe-----ccCccceeEEcCCCCee
Q 021319 217 LWDI--SEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP-----CRAAMNSVEWNPKYNLL 289 (314)
Q Consensus 217 vwd~--~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~-----~~~~i~~v~~~~~~~~l 289 (314)
-.|- .+.+.+. ......+..+.++|++++++ ++.+|.+.+++...|+.-..+. ....+.++++.|++.++
T Consensus 188 S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~ 264 (327)
T 2xbg_A 188 TWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW 264 (327)
T ss_dssp EECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE
T ss_pred EeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE
Confidence 5553 3344332 23345688899999987665 4567777776432233222221 12347889999887777
Q ss_pred EEEecCCcccc
Q 021319 290 AYAGDDKNKYQ 300 (314)
Q Consensus 290 a~~~~d~~~~~ 300 (314)
+.+. ++.+|.
T Consensus 265 ~~g~-~g~i~~ 274 (327)
T 2xbg_A 265 LAGG-AGALLC 274 (327)
T ss_dssp EEES-TTCEEE
T ss_pred EEeC-CCeEEE
Confidence 6554 444443
No 295
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.85 E-value=0.026 Score=55.17 Aligned_cols=276 Identities=16% Similarity=0.169 Sum_probs=140.1
Q ss_pred cccEEEEEECCC------CCEEEEeeC-CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcC-CCCCEEEEEeCCCcE
Q 021319 20 KKKVHSVAWNCT------GTKLASGSV-DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDP-KHADLIATASGDKTV 91 (314)
Q Consensus 20 ~~~V~~v~~s~~------g~~l~s~~~-D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~~D~~v 91 (314)
...|.|+++.|. +++++.|.. |++|+|+.++.- .......+.+ .....++.+.. .+..+|..|-.||.+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l--~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l 629 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF--ELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGAL 629 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC--CEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC--CeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeE
Confidence 457999999864 368888886 999999998642 2222223322 12333443321 223467788899988
Q ss_pred EEE--eCCCCceeee--EEecCceEEEE-EccCCC-EEEEEeCCCcEEEEEccCCeEeeeeccCcce-eeEEeccC--CC
Q 021319 92 RLW--DARSGKCSQQ--AELSGENINIT-YKPDGT-HIAVGNRDDELTILDVRKFKPIHRRKFGYEV-NEIAWNMT--GE 162 (314)
Q Consensus 92 ~iw--d~~~~~~~~~--~~~~~~~~~~~-~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~--~~ 162 (314)
..+ |..+|..... ..+......+. +...+. .+++.+. .-..++--. .+....-.....+ ....|+.. .+
T Consensus 630 ~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~-rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 630 FYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSD-RPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESS-SCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTT
T ss_pred EEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECC-CCEEEEEcC-CceEEeccChHHhceEeccCcccCCC
Confidence 644 4445544322 22233333332 222232 2333333 332233222 1111111111112 12233321 24
Q ss_pred eEEEEcCCceEEEEeCCCCCceeee-eecccceEEEEECCCCCEEEEeeCC-----------------------------
Q 021319 163 MFFLTTGNGTVEVLTYPSLRPLDTV-VAHTAGCYCIAIDPMGRYFAVGSAD----------------------------- 212 (314)
Q Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~i~~~~~~~~l~t~~~d----------------------------- 212 (314)
.++... ++.+++...+..+..... ..-...+..++++|..+.++.+..+
T Consensus 708 g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1158)
T 3ei3_A 708 SLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSS 786 (1158)
T ss_dssp EEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCC
T ss_pred cEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccc
Confidence 454444 455888877654433221 1223557778888776655443311
Q ss_pred --------------------CeEEEeeCCCcEEEEEeeecc-cCeEEE---EEccC-CcEEEEec----------CCceE
Q 021319 213 --------------------SLVSLWDISEMLCVRTFTKLE-WPVRTI---SFSHT-GDYIASAS----------EDLFI 257 (314)
Q Consensus 213 --------------------g~i~vwd~~~~~~~~~~~~~~-~~v~~~---~~sp~-~~~l~s~s----------~d~~v 257 (314)
..|++.|..+.+.+..+.-.+ ..+.++ .|..+ ..+|+.|. ..|.|
T Consensus 787 ~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 787 KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp CCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred ccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 236666666655554443211 123333 34332 47888775 24889
Q ss_pred EEEECCCCC--eEEEEeccCccceeE-EcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 258 DISNVHTGR--TVHQIPCRAAMNSVE-WNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 258 ~v~~~~~~~--~~~~~~~~~~i~~v~-~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
.++++..++ .+.+...++.+++++ | +|.+||..| ..++||++.+
T Consensus 867 ~vf~v~~~kL~lv~~~~v~g~v~al~~~--~g~Lla~ig----------~~l~vy~l~~ 913 (1158)
T 3ei3_A 867 VVFQYSDGKLQTVAEKEVKGAVYSMVEF--NGKLLASIN----------STVRLYEWTT 913 (1158)
T ss_dssp EEEEEETTEEEEEEEEEESSCEEEEEEE--TTEEEEEET----------TEEEEEEECT
T ss_pred EEEEEECCEEEEEEEEEcCCcCEEEeee--CCEEEEEcC----------CEEEEEECCC
Confidence 999986433 223334577888885 5 366666554 3577777753
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.84 E-value=0.02 Score=53.62 Aligned_cols=225 Identities=9% Similarity=-0.025 Sum_probs=131.2
Q ss_pred CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc----eeeeEE-ecCceEEEE
Q 021319 41 DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK----CSQQAE-LSGENINIT 115 (314)
Q Consensus 41 D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~----~~~~~~-~~~~~~~~~ 115 (314)
...|+..+++.... . .+......+.++++++..+.++++-...+.|+.+++.... ...... .......++
T Consensus 403 ~~~Ir~i~l~~~~~---~--~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLA 477 (791)
T 3m0c_C 403 RHEVRKMTLDRSEY---T--SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 477 (791)
T ss_dssp BSSEEEECTTSCCC---E--EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred ccceeEeeccCCcc---e--eeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceee
Confidence 35677776654321 1 1223345677899988666666777777889999886431 111111 113345688
Q ss_pred EccCCCEEE-EEeCCCcEEEEEccCCeEeeee-ccCcceeeEEeccCCCeEEEEc-CC-ceEEEEeCCCCCceeeeeecc
Q 021319 116 YKPDGTHIA-VGNRDDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMFFLTT-GN-GTVEVLTYPSLRPLDTVVAHT 191 (314)
Q Consensus 116 ~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~ 191 (314)
+.+.+..|+ +-...+.|.+.++......... ........++..|....++.+. .. +.|...++........+...-
T Consensus 478 vD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l 557 (791)
T 3m0c_C 478 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 557 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred eeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCC
Confidence 887775555 4455678999988654322222 1223477888888755555554 33 678888776544322222233
Q ss_pred cceEEEEECCCCCEEEEee-CCCeEEEeeCCCcEEEEEeeec--ccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeE
Q 021319 192 AGCYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTFTKL--EWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTV 268 (314)
Q Consensus 192 ~~i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~ 268 (314)
..++.|++++.+..|+.+. ....|...++........+... -.....|++. .+.+.++-...+.|...+..+|+.+
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCC
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCcce
Confidence 5689999998766665554 4568999998644332222221 1123456653 2344555566788888888787666
Q ss_pred EEE
Q 021319 269 HQI 271 (314)
Q Consensus 269 ~~~ 271 (314)
..+
T Consensus 637 ~~l 639 (791)
T 3m0c_C 637 NLL 639 (791)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.78 E-value=0.00028 Score=65.40 Aligned_cols=205 Identities=10% Similarity=-0.031 Sum_probs=115.1
Q ss_pred CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCC----CceeeeEEe-cCceEEEEEccCC-CEEEEEeCCCcEEEEEccCC
Q 021319 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARS----GKCSQQAEL-SGENINITYKPDG-THIAVGNRDDELTILDVRKF 140 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~----~~~~~~~~~-~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~ 140 (314)
..+..++|++..+.++++-...+.|+.+++.. ......... ......+++.+.+ +++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 34567888886655555555678899998865 111111110 1123346676544 44444455678999987654
Q ss_pred eEeeeecc-CcceeeEEeccCCCeEEEEc-CC-ceEEEEeCCCCCceeeeeecccceEEEEECCCCCEE-EEeeCCCeEE
Q 021319 141 KPIHRRKF-GYEVNEIAWNMTGEMFFLTT-GN-GTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYF-AVGSADSLVS 216 (314)
Q Consensus 141 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l-~t~~~dg~i~ 216 (314)
........ ......+++.|.+..++++. .. +.|..+++........+......++.|+++|++..| ++-...+.|.
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 33222221 23467788888655544443 22 677766654322211111122346789999875544 4455567899
Q ss_pred EeeCCCcEEEEEeee--cccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe
Q 021319 217 LWDISEMLCVRTFTK--LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP 272 (314)
Q Consensus 217 vwd~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~ 272 (314)
.+|+........+.. .-.....|++..+ .++++....+.|..++..+|+.+..+.
T Consensus 566 ~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 566 SIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 999864322222211 1112334555443 555566677889999988887776654
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.77 E-value=0.00027 Score=65.42 Aligned_cols=208 Identities=10% Similarity=-0.003 Sum_probs=118.1
Q ss_pred cEEEEEECCCCCEEEEe-eCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCc
Q 021319 22 KVHSVAWNCTGTKLASG-SVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGK 100 (314)
Q Consensus 22 ~V~~v~~s~~g~~l~s~-~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~ 100 (314)
.+..|+|++.+..|.-+ ...+.|+.++++...........+.........+++.+.+++++++-...+.|.+.++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 45678888876665555 45678888887631100000011111112345677775556666666677899999987554
Q ss_pred eeeeEEe-cCceEEEEEccCCCEEEEEeCC--CcEEEEEccCCeEeeee-ccCcceeeEEeccCC-CeEEEEcCCceEEE
Q 021319 101 CSQQAEL-SGENINITYKPDGTHIAVGNRD--DELTILDVRKFKPIHRR-KFGYEVNEIAWNMTG-EMFFLTTGNGTVEV 175 (314)
Q Consensus 101 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~ 175 (314)
....... ......+++.|.+..|+.+... +.|..+++......... ......+.+++++.+ .++++-...+.|..
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 3322221 1234567788876666655432 56777766432211111 112346778999875 45555566788999
Q ss_pred EeCCCCCceeeee--ecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee
Q 021319 176 LTYPSLRPLDTVV--AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (314)
Q Consensus 176 ~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~ 230 (314)
+++........+. .....+..|++..+ .++++....+.|..+|..+++.+..+.
T Consensus 567 ~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 567 IDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp ECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 9886433222111 11233456666654 455566667899999988887776654
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.69 E-value=0.03 Score=51.13 Aligned_cols=223 Identities=11% Similarity=0.033 Sum_probs=135.0
Q ss_pred CCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEec-CceEEEEEcc
Q 021319 40 VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELS-GENINITYKP 118 (314)
Q Consensus 40 ~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~ 118 (314)
....|+..+++.... .....+. .-..+..++|++.++.+.++-..++.|..+++............ ..+..+++.+
T Consensus 13 ~~~~I~~i~l~~~~~--~~~~~~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~ 89 (628)
T 4a0p_A 13 RRADIRRISLETNNN--NVAIPLT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDW 89 (628)
T ss_dssp ETTEEEEEESSCTTC--EEECCCC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET
T ss_pred eCCcEEEEECCCCCc--ceEEEcC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEe
Confidence 346778877764321 1111222 23457799999877767777777899999998755433322222 2355677776
Q ss_pred CCCEEE-EEeCCCcEEEEEccCCe--EeeeeccCcceeeEEeccCCCeEEEEc--CCceEEEEeCCCCCceeeeeecccc
Q 021319 119 DGTHIA-VGNRDDELTILDVRKFK--PIHRRKFGYEVNEIAWNMTGEMFFLTT--GNGTVEVLTYPSLRPLDTVVAHTAG 193 (314)
Q Consensus 119 ~~~~l~-~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~ 193 (314)
.+..|+ +-...+.|.+.++.... .+.. ........++..|....++.+. ..+.|...++...... .+......
T Consensus 90 ~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~ 167 (628)
T 4a0p_A 90 LGKNLYWADTGTNRIEVSKLDGQHRQVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGR 167 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSTTCEEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSS
T ss_pred CCCEEEEEECCCCEEEEEecCCCcEEEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCC
Confidence 655554 44556778888875432 2211 2223567888888655555554 2567777776554432 22233456
Q ss_pred eEEEEECCCCCEEEEee-CCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEE
Q 021319 194 CYCIAIDPMGRYFAVGS-ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVH 269 (314)
Q Consensus 194 i~~i~~~~~~~~l~t~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~ 269 (314)
++.+++++++..|..+. ..+.|...|+..... +.+...-.....+++.. +.+..|-...+.|...|..+|+...
T Consensus 168 P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 168 ANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRT 242 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCE
T ss_pred cceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceE
Confidence 89999999776665554 457899999864322 22222222345677754 4555565667889988887775443
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.64 E-value=0.036 Score=50.59 Aligned_cols=198 Identities=6% Similarity=0.001 Sum_probs=122.3
Q ss_pred ccEEEEEECCCCCEEE-EeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 21 KKVHSVAWNCTGTKLA-SGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~-s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
..+..|+|++++..|. +-..++.|+.++++... ... .+..-......+++++.++++.++-...+.|.+.++...
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~---~~~-v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSA---LEH-VVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEE-EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCC---cEE-EEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 3577899998766554 44567888888775321 111 122222446678888766667777777889999998654
Q ss_pred ceeeeE-EecCceEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEE-EEcCCceEEE
Q 021319 100 KCSQQA-ELSGENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFF-LTTGNGTVEV 175 (314)
Q Consensus 100 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 175 (314)
...... ..-..+..+++.|....|+.... .+.|...++.......-.........+++.+.+..++ +-...+.+..
T Consensus 113 ~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 113 HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 432222 12234678899987666766653 4567777765432222122334577889988655544 4456788999
Q ss_pred EeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE
Q 021319 176 LTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEML 224 (314)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~ 224 (314)
+++..... ..+......+..+++.. +.++++-...+.|...|..+++
T Consensus 193 ~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 193 SNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred EcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 88865433 33333344567888865 4455555567889888865543
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.62 E-value=0.023 Score=47.87 Aligned_cols=220 Identities=16% Similarity=0.143 Sum_probs=119.3
Q ss_pred CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEe------cCceEEEEEccC---CCEEEEEeC-C-----Cc
Q 021319 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL------SGENINITYKPD---GTHIAVGNR-D-----DE 131 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~---~~~l~~~~~-d-----~~ 131 (314)
.....++|.|++ .+++ +..++.|++++ .+........ ......++++|+ +..|.++.. . ..
T Consensus 31 ~~P~~ia~~pdG-~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDG-GMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTS-CEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCC-eEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 346789999975 4554 45679999998 4442211111 234677999998 555555443 2 56
Q ss_pred EEEEEccCC-----eEeee-ec----cCcceeeEEeccCCCeEEEEcC-------------CceEEEEeCCCCC------
Q 021319 132 LTILDVRKF-----KPIHR-RK----FGYEVNEIAWNMTGEMFFLTTG-------------NGTVEVLTYPSLR------ 182 (314)
Q Consensus 132 i~i~d~~~~-----~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~-------------~g~~~~~~~~~~~------ 182 (314)
|..++.... +.+.. .. .......+++.|+|.++++... .|.|..++....-
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 777776532 11211 11 0123467899999976665432 2566666543210
Q ss_pred ------ceeee-eecccceEEEEECC-CCCEEEEeeCCCeE------EEeeCCCcE------------------EEEEee
Q 021319 183 ------PLDTV-VAHTAGCYCIAIDP-MGRYFAVGSADSLV------SLWDISEML------------------CVRTFT 230 (314)
Q Consensus 183 ------~~~~~-~~~~~~i~~i~~~~-~~~~l~t~~~dg~i------~vwd~~~~~------------------~~~~~~ 230 (314)
....+ .++ ..+..++|+| +++++++-.....+ .+.-+..+. .+..+
T Consensus 187 ~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~- 264 (352)
T 2ism_A 187 LGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW- 264 (352)
T ss_dssp TTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-
T ss_pred cCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-
Confidence 01111 122 2367889999 67665544333321 122211111 11111
Q ss_pred ecccCeEEEEEccCCcEEEEecCCceEEEEECCCCCe------EEEE-eccCccceeEEcCCCCeeEEEe
Q 021319 231 KLEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT------VHQI-PCRAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 231 ~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~------~~~~-~~~~~i~~v~~~~~~~~la~~~ 293 (314)
........++| .+|.++++.-..+.|...+...... ...+ .....+..|++.|++.++++..
T Consensus 265 ~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 11123566777 6777777766777787777654321 1222 2235789999999998876654
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.48 E-value=0.047 Score=49.73 Aligned_cols=201 Identities=6% Similarity=-0.058 Sum_probs=115.2
Q ss_pred ccEEEEEECCCCCEEEEee-CCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC
Q 021319 21 KKVHSVAWNCTGTKLASGS-VDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG 99 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~-~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~ 99 (314)
+....|+|++.+..|.-+. ..+.|..++++... . ....+..-......+++++.++++.++-...+.|.+.+....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--~-~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--S-VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--c-eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 4577889998766655444 46777777765321 1 111222223567889998876677777778899999998755
Q ss_pred ceeeeE-EecCceEEEEEccCCCEEEEEeC--CCcEEEEEccCCeEeeee-ccCcceeeEEeccCCCeE-EEEcCCceEE
Q 021319 100 KCSQQA-ELSGENINITYKPDGTHIAVGNR--DDELTILDVRKFKPIHRR-KFGYEVNEIAWNMTGEMF-FLTTGNGTVE 174 (314)
Q Consensus 100 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~g~~~ 174 (314)
...... ..-..+..+++.|.+..|+.... .+.|...++.-.....-. ........++..+....+ ++-...+.|.
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~ 196 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 196 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEE
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEE
Confidence 432222 11234556888887666666654 345666665432211111 122356788888865544 4445667888
Q ss_pred EEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEE
Q 021319 175 VLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (314)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~ 225 (314)
.+++..........+....+..+++..+ ....+-...+.|...|..+++.
T Consensus 197 ~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 197 KSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred EecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 8887653322222212233456777755 4455555667888888766543
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.47 E-value=0.037 Score=46.52 Aligned_cols=181 Identities=17% Similarity=0.185 Sum_probs=103.5
Q ss_pred CCCcEEEEeCCC--CceeeeEEecC--------ceEEEEEcc--CCC--EEEEEeC--CCcEEEEEccCC--e--Eeeee
Q 021319 87 GDKTVRLWDARS--GKCSQQAELSG--------ENINITYKP--DGT--HIAVGNR--DDELTILDVRKF--K--PIHRR 146 (314)
Q Consensus 87 ~D~~v~iwd~~~--~~~~~~~~~~~--------~~~~~~~~~--~~~--~l~~~~~--d~~i~i~d~~~~--~--~~~~~ 146 (314)
.+|.|.++|..+ ++.. .+...+ ....+.+.+ ++. ++++... +..+.+|++... . .+...
T Consensus 81 ~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCceE-EEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 689999999873 3322 222222 344566544 453 4445444 456778776542 2 12222
Q ss_pred cc--CcceeeEEeccCCCeEEEEc-----------------CCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEE
Q 021319 147 KF--GYEVNEIAWNMTGEMFFLTT-----------------GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFA 207 (314)
Q Consensus 147 ~~--~~~~~~~~~~~~~~~~~~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~ 207 (314)
.. -...+.++..++|..++... ..|.+..++. .+ +..+...-...+.++|+||++.|.
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lY 236 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVY 236 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEE
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEE
Confidence 22 23568888888888776653 1245555543 22 223333334578999999998877
Q ss_pred Eee-CCCeEEEeeCCC-cE--EEEEeeecccCeEEEEEcc-CCcEEEEecCC-ceEEEEECC--CCCeEEEEe
Q 021319 208 VGS-ADSLVSLWDISE-ML--CVRTFTKLEWPVRTISFSH-TGDYIASASED-LFIDISNVH--TGRTVHQIP 272 (314)
Q Consensus 208 t~~-~dg~i~vwd~~~-~~--~~~~~~~~~~~v~~~~~sp-~~~~l~s~s~d-~~v~v~~~~--~~~~~~~~~ 272 (314)
.+. ..+.|..|++.. +. ..+.+ ........++..+ +|.+.+++..+ +.|..++.. .+..+..+.
T Consensus 237 vadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 237 IAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred EEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 665 467899999863 32 22333 3345567899999 59988877655 344444433 234444443
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.20 E-value=0.079 Score=44.53 Aligned_cols=163 Identities=13% Similarity=0.158 Sum_probs=92.1
Q ss_pred CCCcEEEEEccCC--eE--eeeec-----cCcceeeEEecc--CCC--eEEEEcC--CceEEEEeCCCCCce----eeee
Q 021319 128 RDDELTILDVRKF--KP--IHRRK-----FGYEVNEIAWNM--TGE--MFFLTTG--NGTVEVLTYPSLRPL----DTVV 188 (314)
Q Consensus 128 ~d~~i~i~d~~~~--~~--~~~~~-----~~~~~~~~~~~~--~~~--~~~~~~~--~g~~~~~~~~~~~~~----~~~~ 188 (314)
.+|.|.++|+.+. +. +.... ..+....+...+ ++. .+++-.. ++.+.++++...... ..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6888999998732 22 11111 113444555544 343 3444333 567777776443222 2222
Q ss_pred ec-ccceEEEEECCCCCEEEEee-----------------CCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEE
Q 021319 189 AH-TAGCYCIAIDPMGRYFAVGS-----------------ADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIAS 250 (314)
Q Consensus 189 ~~-~~~i~~i~~~~~~~~l~t~~-----------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 250 (314)
+. -..++.+++.++|++.++.. ..|.|..+|..+.+. ...+. ...+.++||||+++|..
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~--~~~~l-~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRV--VAEGF-DFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEE--EEEEE-SSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEE--eecCC-cccCcceECCCCCEEEE
Confidence 21 13578999999999887754 124555555532221 22222 34688999999987776
Q ss_pred e-cCCceEEEEECCC-CCeE--EEEeccCccceeEEcC-CCCeeEEEe
Q 021319 251 A-SEDLFIDISNVHT-GRTV--HQIPCRAAMNSVEWNP-KYNLLAYAG 293 (314)
Q Consensus 251 ~-s~d~~v~v~~~~~-~~~~--~~~~~~~~i~~v~~~~-~~~~la~~~ 293 (314)
+ +....|..+++.. ++.- +.+...+..-.++..+ +|++.+++.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 5 4678899999863 4322 2233334456778887 587766554
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.12 E-value=0.085 Score=43.61 Aligned_cols=203 Identities=8% Similarity=0.059 Sum_probs=122.4
Q ss_pred ecccccEEEEEECCCCCE-EEEeeCCCcEEEeecCCCCCCceeeEEeec----CC--CCEEEEEE---cCCCCCEEEEEe
Q 021319 17 TGHKKKVHSVAWNCTGTK-LASGSVDQTARVWHIEPHGHGKVKDIELRG----HA--DSVDQLCW---DPKHADLIATAS 86 (314)
Q Consensus 17 ~gH~~~V~~v~~s~~g~~-l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~----h~--~~v~~l~~---~~~~~~~l~s~~ 86 (314)
.+..-.-.++.|.+.... +++.-..++|..|+.... ......+.+ .. ..+..+.| .|. +.+++...
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~---~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~ 84 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ---SHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMK 84 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTC---CEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEE
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCC---eEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEc
Confidence 333344557889775544 555558999999987532 122222322 11 13578899 576 45655433
Q ss_pred -------------CCCcEEEEeCC---CCceeeeEEec----C----------ceEEEEEccCCCEEEEEeCC-CcEEEE
Q 021319 87 -------------GDKTVRLWDAR---SGKCSQQAELS----G----------ENINITYKPDGTHIAVGNRD-DELTIL 135 (314)
Q Consensus 87 -------------~D~~v~iwd~~---~~~~~~~~~~~----~----------~~~~~~~~~~~~~l~~~~~d-~~i~i~ 135 (314)
.+..|..+|+. +++......+. + ....++..++|+..++++.. +.|..+
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence 26889999998 77765544432 1 24468899999999988888 877777
Q ss_pred EccCCeEe-eeecc-----CcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCc--eeeee-ec---ccceEE-EEECCC
Q 021319 136 DVRKFKPI-HRRKF-----GYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP--LDTVV-AH---TAGCYC-IAIDPM 202 (314)
Q Consensus 136 d~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~-~~---~~~i~~-i~~~~~ 202 (314)
+....... .-... ..-.+.++++|++..+++....|.+..++...... +..-. +. ...... +....+
T Consensus 165 ~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~ 244 (334)
T 2p9w_A 165 SADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVG 244 (334)
T ss_dssp CTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEET
T ss_pred eCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccC
Confidence 76543211 11111 11256889999999999998899999999763222 11110 11 112333 344457
Q ss_pred CCE-EEEeeCCCeEEEeeCCCc
Q 021319 203 GRY-FAVGSADSLVSLWDISEM 223 (314)
Q Consensus 203 ~~~-l~t~~~dg~i~vwd~~~~ 223 (314)
|+. +++...++.+.+.+.+..
T Consensus 245 G~vllV~~~~~~~~~l~S~DgW 266 (334)
T 2p9w_A 245 NESVLVGARAPYAISFRSWDNW 266 (334)
T ss_dssp TEEEEEEEETTEEEEEECSSTT
T ss_pred CEEEEEEcCCCCEEEEECCCCc
Confidence 777 555556666666665543
No 306
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.09 E-value=0.1 Score=43.89 Aligned_cols=227 Identities=15% Similarity=0.095 Sum_probs=121.5
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEee---cCCCCEEEEEEcCC---CCCEEEEEeC---C--
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR---GHADSVDQLCWDPK---HADLIATASG---D-- 88 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~---~h~~~v~~l~~~~~---~~~~l~s~~~---D-- 88 (314)
-..-..++|.|+|.++++ ..++.|++++.+ . ......+. ........++++|+ ++.+.++-+. +
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~--G--~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLISPS--G--KKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEECSS--C--EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEeCC--C--ceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 456789999999986555 455888888632 1 11111111 12345789999986 4445554442 3
Q ss_pred --CcEEEEeCCCC--cee------eeEEec--CceEEEEEccCCCEEEEEeCC-------------CcEEEEEccCC---
Q 021319 89 --KTVRLWDARSG--KCS------QQAELS--GENINITYKPDGTHIAVGNRD-------------DELTILDVRKF--- 140 (314)
Q Consensus 89 --~~v~iwd~~~~--~~~------~~~~~~--~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~--- 140 (314)
..|..++.... ... ...... .....+.|.|||.+.++.+.. +.|.-++....
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~ 182 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPA 182 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCT
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCC
Confidence 56777776543 111 111111 112358899999866654321 34444443221
Q ss_pred ------eEeeeeccCcceeeEEecc-CCCeEEEEcCCc---eEEEEeCCC----------------CCceeeeeecccce
Q 021319 141 ------KPIHRRKFGYEVNEIAWNM-TGEMFFLTTGNG---TVEVLTYPS----------------LRPLDTVVAHTAGC 194 (314)
Q Consensus 141 ------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g---~~~~~~~~~----------------~~~~~~~~~~~~~i 194 (314)
..+...- ......++|++ .+.++++-...+ .+.+..... ..++..+......+
T Consensus 183 ~npf~~~~i~a~G-~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap 261 (354)
T 3a9g_A 183 DNPFPNSPIWSYG-HRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAP 261 (354)
T ss_dssp TSSSTTCCEEEEC-CSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCE
T ss_pred CCCCCCCcEEEEc-cCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCC
Confidence 0011100 11245788888 666666554432 243332111 01222221112357
Q ss_pred EEEEEC-------CCCCEEEEeeCCCeEEEeeCCCc-EEE--EEee-ecccCeEEEEEccCCcEEEEec
Q 021319 195 YCIAID-------PMGRYFAVGSADSLVSLWDISEM-LCV--RTFT-KLEWPVRTISFSHTGDYIASAS 252 (314)
Q Consensus 195 ~~i~~~-------~~~~~l~t~~~dg~i~vwd~~~~-~~~--~~~~-~~~~~v~~~~~sp~~~~l~s~s 252 (314)
..++|. .+|+++++.-..+.|...++... ... ..+. .....+..+++.|||.+.++..
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 788883 56777777777778988888742 222 2222 2234678899999997766654
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.05 E-value=0.11 Score=43.66 Aligned_cols=237 Identities=10% Similarity=0.079 Sum_probs=120.6
Q ss_pred ccccEEEEEECCCCC-EEEEeeCCCcEEEeecCCCCCCceeeE--EeecCCCCEEEEEEcCC---CCCEEEEEeC-----
Q 021319 19 HKKKVHSVAWNCTGT-KLASGSVDQTARVWHIEPHGHGKVKDI--ELRGHADSVDQLCWDPK---HADLIATASG----- 87 (314)
Q Consensus 19 H~~~V~~v~~s~~g~-~l~s~~~D~~v~iw~~~~~~~~~~~~~--~~~~h~~~v~~l~~~~~---~~~~l~s~~~----- 87 (314)
--..-..++|.|+|. ++++ ...|.|++++.+......+... ...........++++|+ ++.+.++-..
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp EESSEEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCCCcEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 345678999999998 5554 4578888887431100000000 01112345688999985 4444444332
Q ss_pred --CCcEEEEeCCCC--cee--ee-EE-ec------CceEEEEEccCCCEEEEEeCC-------------CcEEEEEccCC
Q 021319 88 --DKTVRLWDARSG--KCS--QQ-AE-LS------GENINITYKPDGTHIAVGNRD-------------DELTILDVRKF 140 (314)
Q Consensus 88 --D~~v~iwd~~~~--~~~--~~-~~-~~------~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~ 140 (314)
...|..++...+ ... .. +. .. .....+.|.|||.+.++.+.. +.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 235656665432 111 11 11 11 112358999999655554331 34555555421
Q ss_pred eE------------eeeeccC-cceeeEEecc-CCCeEEEEcCC---ceEEEEeCCC-----------------------
Q 021319 141 KP------------IHRRKFG-YEVNEIAWNM-TGEMFFLTTGN---GTVEVLTYPS----------------------- 180 (314)
Q Consensus 141 ~~------------~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~---g~~~~~~~~~----------------------- 180 (314)
-+ ......+ .....++|.+ .+.++++-... ..+.......
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 00 0001111 2356788888 56555543331 1232211000
Q ss_pred ------CCceeeeeecccceEEEEECC-------CCCEEEEeeCCCeEEEeeCCCcEEEEE--e-eecccCeEEEEEccC
Q 021319 181 ------LRPLDTVVAHTAGCYCIAIDP-------MGRYFAVGSADSLVSLWDISEMLCVRT--F-TKLEWPVRTISFSHT 244 (314)
Q Consensus 181 ------~~~~~~~~~~~~~i~~i~~~~-------~~~~l~t~~~dg~i~vwd~~~~~~~~~--~-~~~~~~v~~~~~sp~ 244 (314)
..++..+ .+...+..++|.. +|+++++.-..+.|...++..+..... + ......+..+++.||
T Consensus 255 ~~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 255 EIVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp SSCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 0011111 1223567788853 467777776778888888876544322 2 122236888999999
Q ss_pred CcEEEEec-CCceE
Q 021319 245 GDYIASAS-EDLFI 257 (314)
Q Consensus 245 ~~~l~s~s-~d~~v 257 (314)
|.+.++.. .++.|
T Consensus 334 G~lyv~td~~~g~I 347 (353)
T 2g8s_A 334 GYLYVLTDESSGEL 347 (353)
T ss_dssp SCEEEEECSTTEEE
T ss_pred CcEEEEEeCCCCEE
Confidence 98666432 44543
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.99 E-value=0.11 Score=42.39 Aligned_cols=182 Identities=14% Similarity=0.049 Sum_probs=91.6
Q ss_pred CCEEEEEeCC-----CcEEEEeCCCCc---eeeeEEecCc--eEEEEEccCCCEEEEEeCC-----CcEEEEEccCCeEe
Q 021319 79 ADLIATASGD-----KTVRLWDARSGK---CSQQAELSGE--NINITYKPDGTHIAVGNRD-----DELTILDVRKFKPI 143 (314)
Q Consensus 79 ~~~l~s~~~D-----~~v~iwd~~~~~---~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 143 (314)
+.+++.|+.+ ..+.++|+.+.. .......... ...++. .+++.++.|+.+ ..+.++|+.+.+..
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 4566677654 468899988776 4433222111 111222 266777777654 35788898776543
Q ss_pred eeeccCc-ceeeEEeccCCCeEEEEcCC-----ceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCC---
Q 021319 144 HRRKFGY-EVNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSAD--- 212 (314)
Q Consensus 144 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~d--- 212 (314)
....... .........++..+++++.+ ..+..|+....+- +..+........++.+ ++++++.|+.+
T Consensus 142 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 142 MLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTA 219 (301)
T ss_dssp EEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS
T ss_pred ECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCc
Confidence 3211111 11111122356666666533 4566677544321 1111111111122333 56777888765
Q ss_pred --CeEEEeeCCCcEEEEE--eeecccCeEEEEEccCCcEEEEecCC-----ceEEEEECCCC
Q 021319 213 --SLVSLWDISEMLCVRT--FTKLEWPVRTISFSHTGDYIASASED-----LFIDISNVHTG 265 (314)
Q Consensus 213 --g~i~vwd~~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~s~s~d-----~~v~v~~~~~~ 265 (314)
..+.+||+.+.+-... +......... ...++++++.|+.+ ..+.++|..+.
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTSMTTPRCYVGA--TVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEE--EEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred ccceEEEEeCCCCcEEECCCCCCcccceeE--EEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 3589999987654322 1111111122 22367788888765 35677787654
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.91 E-value=0.12 Score=41.95 Aligned_cols=215 Identities=13% Similarity=0.061 Sum_probs=104.8
Q ss_pred CcEEEEeCCCCceeeeEEecCc--eEEEEEccCCCEEEEEeCC-----CcEEEEEccCCe---Eeee--eccCcceeeEE
Q 021319 89 KTVRLWDARSGKCSQQAELSGE--NINITYKPDGTHIAVGNRD-----DELTILDVRKFK---PIHR--RKFGYEVNEIA 156 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~---~~~~--~~~~~~~~~~~ 156 (314)
..+.++|+.+++.......... ...+ ...++..++.|+.+ ..+.++|+.+.+ .... ......-..+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~- 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVAS-VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA- 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEE-EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE-
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccE-EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE-
Confidence 3677888877764433222111 1112 22356777777754 358889987654 2221 1111111111
Q ss_pred eccCCCeEEEEcCC-----ceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCCC-----eEEEeeCCCcE
Q 021319 157 WNMTGEMFFLTTGN-----GTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSADS-----LVSLWDISEML 224 (314)
Q Consensus 157 ~~~~~~~~~~~~~~-----g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg-----~i~vwd~~~~~ 224 (314)
...++..+++++.+ ..+.+|+....+- +..+........++.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 109 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 12355666665532 3566777654321 1111111111122223 577777777653 58899987764
Q ss_pred EEEEeeecccC-eEEEEEccCCcEEEEecCC-----ceEEEEECCCCCeEEE--Eec-cCccceeEEcCCCCeeEEEecC
Q 021319 225 CVRTFTKLEWP-VRTISFSHTGDYIASASED-----LFIDISNVHTGRTVHQ--IPC-RAAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 225 ~~~~~~~~~~~-v~~~~~sp~~~~l~s~s~d-----~~v~v~~~~~~~~~~~--~~~-~~~i~~v~~~~~~~~la~~~~d 295 (314)
-... .....+ ....+...++++++.|+.+ ..+.++|..+.+=... ++. +..-..+.+ ++.+++.||.+
T Consensus 187 W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 263 (301)
T 2vpj_A 187 WTNV-TPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYD 263 (301)
T ss_dssp EEEE-CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred EEeC-CCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcC
Confidence 4322 111111 1111222367888888764 4588899876532211 111 111122232 67788888866
Q ss_pred CcccccccceEEeccccC
Q 021319 296 KNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~ 313 (314)
... ....+.+|+++.
T Consensus 264 ~~~---~~~~v~~yd~~~ 278 (301)
T 2vpj_A 264 GNS---LLSSIECYDPII 278 (301)
T ss_dssp SSS---BEEEEEEEETTT
T ss_pred CCc---ccccEEEEcCCC
Confidence 532 124566776643
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.91 E-value=0.13 Score=41.99 Aligned_cols=183 Identities=14% Similarity=0.133 Sum_probs=90.5
Q ss_pred CCEEEEEeCC-----CcEEEEeCCCCceeeeEEecCc--eEEEEEccCCCEEEEEeCCC-----cEEEEEccCCeEeeee
Q 021319 79 ADLIATASGD-----KTVRLWDARSGKCSQQAELSGE--NINITYKPDGTHIAVGNRDD-----ELTILDVRKFKPIHRR 146 (314)
Q Consensus 79 ~~~l~s~~~D-----~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~ 146 (314)
+.+++.|+.+ ..+.++|..+.+.......... ...++. .+++.++.|+.++ .+.+||+.+.+.....
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 4566677654 3578889887765443222111 111222 2667777777654 4677888766543322
Q ss_pred ccCcc-eeeEEeccCCCeEEEEcC-------CceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCCC---
Q 021319 147 KFGYE-VNEIAWNMTGEMFFLTTG-------NGTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSADS--- 213 (314)
Q Consensus 147 ~~~~~-~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg--- 213 (314)
..... ........++..+++++. ...+..|+....+- +..+........++.+ ++++++.|+.++
T Consensus 141 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 141 PMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLV 218 (302)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSB
T ss_pred CCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcc
Confidence 11111 111111235556666543 23466777644321 1111111111122233 577788887653
Q ss_pred --eEEEeeCCCcEEEEEeeecccC-eEEEEEccCCcEEEEecCCc-----eEEEEECCCC
Q 021319 214 --LVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDL-----FIDISNVHTG 265 (314)
Q Consensus 214 --~i~vwd~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~s~s~d~-----~v~v~~~~~~ 265 (314)
.+.+||+.+.+-.. +.....+ ....+...++++++.|+.++ .+.++|..+.
T Consensus 219 ~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQ-VADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred cceEEEEeCCCCCEee-CCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 58899988764332 2111111 11112223677888887653 3777777664
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.78 E-value=0.16 Score=41.38 Aligned_cols=224 Identities=10% Similarity=0.031 Sum_probs=110.4
Q ss_pred EEEEEeC--CCcEEEEeCCCCceeeeEEecCc--eEEEEEccCCCEEEEEeCC----CcEEEEEccCCeEeeeeccCc-c
Q 021319 81 LIATASG--DKTVRLWDARSGKCSQQAELSGE--NINITYKPDGTHIAVGNRD----DELTILDVRKFKPIHRRKFGY-E 151 (314)
Q Consensus 81 ~l~s~~~--D~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~-~ 151 (314)
+++.|+. ...+.++|..+++.......... ...+. ..++..++.|+.+ ..+.++|+.+.+......... .
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEE-EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEE-EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 4445544 35788899888765433222111 11122 2366677777754 568888988765433222111 1
Q ss_pred eeeEEeccCCCeEEEEcCC------ceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCC---------Ce
Q 021319 152 VNEIAWNMTGEMFFLTTGN------GTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSAD---------SL 214 (314)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~d---------g~ 214 (314)
....+...++..+++++.+ ..+.+|+....+- +..+......-.++.+ ++++++.|+.+ ..
T Consensus 93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 170 (306)
T 3ii7_A 93 DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNS 170 (306)
T ss_dssp BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCC
T ss_pred cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccce
Confidence 1111122355666666543 3566777654321 1111111111122222 56777777642 34
Q ss_pred EEEeeCCCcEEEEEeeecccC-eEEEEEccCCcEEEEecCC-----ceEEEEECCCCC--eEEEEec-cCccceeEEcCC
Q 021319 215 VSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASED-----LFIDISNVHTGR--TVHQIPC-RAAMNSVEWNPK 285 (314)
Q Consensus 215 i~vwd~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~s~s~d-----~~v~v~~~~~~~--~~~~~~~-~~~i~~v~~~~~ 285 (314)
+.+||+.+..-... .....+ ....+..-++++++.|+.+ ..+.++|..+.+ .+..++. +.....+.+ +
T Consensus 171 ~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 247 (306)
T 3ii7_A 171 CEVYDPATETWTEL-CPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--G 247 (306)
T ss_dssp EEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--T
T ss_pred EEEeCCCCCeEEEC-CCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--C
Confidence 88999887643322 111111 1111122367778877754 357888887643 1111111 112223333 6
Q ss_pred CCeeEEEecCCcccccccceEEeccccC
Q 021319 286 YNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 286 ~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
+.+++.||.+...+ ...+.+|+.+.
T Consensus 248 ~~i~v~GG~~~~~~---~~~~~~yd~~~ 272 (306)
T 3ii7_A 248 SIVYVLAGFQGVGR---LGHILEYNTET 272 (306)
T ss_dssp TEEEEEECBCSSSB---CCEEEEEETTT
T ss_pred CEEEEEeCcCCCee---eeeEEEEcCCC
Confidence 77888888765432 34677777654
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.76 E-value=0.17 Score=41.30 Aligned_cols=182 Identities=12% Similarity=0.049 Sum_probs=92.3
Q ss_pred CCEEEEEeCC----CcEEEEeCCCCceeeeEEecCce--EEEEEccCCCEEEEEeCC------CcEEEEEccCCeEeeee
Q 021319 79 ADLIATASGD----KTVRLWDARSGKCSQQAELSGEN--INITYKPDGTHIAVGNRD------DELTILDVRKFKPIHRR 146 (314)
Q Consensus 79 ~~~l~s~~~D----~~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~ 146 (314)
+.+++.|+.+ ..+.++|+.+.+......+.... ..++ ..+++.++.|+.+ ..+.+||+.+.+.....
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 3566677654 56788898887654433222111 1122 2267777777765 45888998876543321
Q ss_pred ccCcc-eeeEEeccCCCeEEEEcC---------CceEEEEeCCCCC--ceeeeeecccceEEEEECCCCCEEEEeeCCC-
Q 021319 147 KFGYE-VNEIAWNMTGEMFFLTTG---------NGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSADS- 213 (314)
Q Consensus 147 ~~~~~-~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg- 213 (314)
..... ........++..+++++. ...+..|+....+ .+..+......-.++.+ ++++++.|+.++
T Consensus 135 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 135 SMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGL 212 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETT
T ss_pred CCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCC
Confidence 11111 111111235556666542 3446677765432 11111111111122223 567777777543
Q ss_pred ----eEEEeeCCCcEEEE--EeeecccCeEEEEEccCCcEEEEecCC-----ceEEEEECCCC
Q 021319 214 ----LVSLWDISEMLCVR--TFTKLEWPVRTISFSHTGDYIASASED-----LFIDISNVHTG 265 (314)
Q Consensus 214 ----~i~vwd~~~~~~~~--~~~~~~~~v~~~~~sp~~~~l~s~s~d-----~~v~v~~~~~~ 265 (314)
.+.+||+.+.+-.. .+.........+.+ ++++++.|+.+ ..+.++|..+.
T Consensus 213 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 213 GGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 58899987764322 11111111222222 67888888754 45788888764
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.62 E-value=0.21 Score=40.61 Aligned_cols=216 Identities=16% Similarity=0.084 Sum_probs=103.3
Q ss_pred CcEEEEeCCCCceeeeEEecCc--eEEEEEccCCCEEEEEeCC-----CcEEEEEccCCeEeeeeccCc-ceeeEEeccC
Q 021319 89 KTVRLWDARSGKCSQQAELSGE--NINITYKPDGTHIAVGNRD-----DELTILDVRKFKPIHRRKFGY-EVNEIAWNMT 160 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~ 160 (314)
..+..+|+.+.+......+... ...++ ..++..++.|+.+ ..+.+||+.+.+......... .....+...+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 108 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLN 108 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEEC
Confidence 3567788877654332221111 11122 2266677777754 358888987765433221111 1111111235
Q ss_pred CCeEEEEcCC-----ceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCC-------CeEEEeeCCCcEEE
Q 021319 161 GEMFFLTTGN-----GTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSAD-------SLVSLWDISEMLCV 226 (314)
Q Consensus 161 ~~~~~~~~~~-----g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~d-------g~i~vwd~~~~~~~ 226 (314)
+..+++++.+ ..+..|+....+- +..+........++.+ ++++++.|+.+ ..+.+||+.+..-.
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 6666766543 2455666543321 1111111111122222 56777777653 34889998776433
Q ss_pred EE--eeecccCeEEEEEccCCcEEEEecCC-----ceEEEEECCCCCeEEEEec--cCccceeEEcCCCCeeEEEecCCc
Q 021319 227 RT--FTKLEWPVRTISFSHTGDYIASASED-----LFIDISNVHTGRTVHQIPC--RAAMNSVEWNPKYNLLAYAGDDKN 297 (314)
Q Consensus 227 ~~--~~~~~~~v~~~~~sp~~~~l~s~s~d-----~~v~v~~~~~~~~~~~~~~--~~~i~~v~~~~~~~~la~~~~d~~ 297 (314)
.. +.........+ ..++++++.|+.+ ..+.++|..+.+=. .+.. ...-...+...++.+++.||.+..
T Consensus 187 ~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~ 263 (302)
T 2xn4_A 187 YIAEMSTRRSGAGVG--VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR-QVADMNMCRRNAGVCAVNGLLYVVGGDDGS 263 (302)
T ss_dssp EECCCSSCCBSCEEE--EETTEEEEECCBSSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred ECCCCccccccccEE--EECCEEEEECCCCCCcccceEEEEeCCCCCEe-eCCCCCCccccCeEEEECCEEEEECCcCCC
Confidence 22 11111111222 2367888888764 35888888765321 1211 011111111226778888887654
Q ss_pred ccccccceEEeccccC
Q 021319 298 KYQADEGVFRIYGFEN 313 (314)
Q Consensus 298 ~~~~~~~~~~~~~~~~ 313 (314)
.. ...+.+|+.+.
T Consensus 264 ~~---~~~v~~yd~~~ 276 (302)
T 2xn4_A 264 CN---LASVEYYNPTT 276 (302)
T ss_dssp SB---CCCEEEEETTT
T ss_pred cc---cccEEEEcCCC
Confidence 22 34566777653
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.60 E-value=0.25 Score=42.35 Aligned_cols=104 Identities=8% Similarity=0.128 Sum_probs=71.5
Q ss_pred ceEEEEECCCCCEEEEeeCCCeEEEeeCCCcE------------EEEEeee------cccCeEEEEEccCC---cEEEEe
Q 021319 193 GCYCIAIDPMGRYFAVGSADSLVSLWDISEML------------CVRTFTK------LEWPVRTISFSHTG---DYIASA 251 (314)
Q Consensus 193 ~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~------------~~~~~~~------~~~~v~~~~~sp~~---~~l~s~ 251 (314)
.+..+..||+|++||..+.. .|.|-.+..+. ..+.+.- ...+|..+-|||-+ ..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 57789999999999988644 68888876221 1233332 24679999999975 589999
Q ss_pred cCCceEEEEECCCCC--eEEEEe-------c---cCccceeEEcCCCCeeEEEe--cCCcc
Q 021319 252 SEDLFIDISNVHTGR--TVHQIP-------C---RAAMNSVEWNPKYNLLAYAG--DDKNK 298 (314)
Q Consensus 252 s~d~~v~v~~~~~~~--~~~~~~-------~---~~~i~~v~~~~~~~~la~~~--~d~~~ 298 (314)
..|+.|++||+.... +. .+. . ...|.+++|.+++-.|-... +.+..
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCE
Confidence 999999999997532 22 221 1 13578999999776665544 44443
No 315
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.006 Score=50.89 Aligned_cols=187 Identities=10% Similarity=0.059 Sum_probs=102.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCceeeeEEec--CceEEEEE--ccCCCEEEEE--eCCCcEEEEEccCCeEeeeeccCccee
Q 021319 80 DLIATASGDKTVRLWDARSGKCSQQAELS--GENINITY--KPDGTHIAVG--NRDDELTILDVRKFKPIHRRKFGYEVN 153 (314)
Q Consensus 80 ~~l~s~~~D~~v~iwd~~~~~~~~~~~~~--~~~~~~~~--~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~ 153 (314)
.+++.++.||.|.-.|..+|+..-..+.. ...+...- .+.+..++++ +.||.+..++..+.........+..+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47788999999999999999876665544 22222110 1112234443 589999999987764443332221111
Q ss_pred --eEEec-----------cCCCeEEEEcCCceEEEEeCCCCCceeeeeeccc-c------eEEEEEC-----CCCCEEEE
Q 021319 154 --EIAWN-----------MTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTA-G------CYCIAID-----PMGRYFAV 208 (314)
Q Consensus 154 --~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~------i~~i~~~-----~~~~~l~t 208 (314)
.+... ..+..++++..+|++..++..+++.+..+..... . ..|.... -.+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 01110 1455677888899999999988887766542211 0 0111111 12345666
Q ss_pred eeCCCeEEEeeCCCcEEEEE-----eeecccC--eE-EEEEccCCcEEEEecCCceEEEEECCCCCeEE
Q 021319 209 GSADSLVSLWDISEMLCVRT-----FTKLEWP--VR-TISFSHTGDYIASASEDLFIDISNVHTGRTVH 269 (314)
Q Consensus 209 ~~~dg~i~vwd~~~~~~~~~-----~~~~~~~--v~-~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~ 269 (314)
+..+..+.+.+ ++++ +-. +...... +. .-..+.++.+ +.++.|+.|...|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 66666666666 3332 111 1100000 00 0001234666 447889999999999998876
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.39 E-value=0.33 Score=40.10 Aligned_cols=130 Identities=12% Similarity=0.202 Sum_probs=85.4
Q ss_pred CCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEE
Q 021319 88 DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT 167 (314)
Q Consensus 88 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
+.+|-|.|+.++......+...+ +.-++|..+.+|.-. ...+.++|+++.+.++......++.-..|-.....-++
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~Ad--sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lV- 123 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISAD--SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV- 123 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCS--EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEE-
T ss_pred CCEEEEEECCCCCCccccccccc--eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEE-
Confidence 34788889887654443333332 233588888888876 67899999999988888777777777777554444333
Q ss_pred cCCceEEEEeCCC-CCceeeeeecc----cceEEEEECCCCCEEEEeeC-------CCeEEEeeCCC
Q 021319 168 TGNGTVEVLTYPS-LRPLDTVVAHT----AGCYCIAIDPMGRYFAVGSA-------DSLVSLWDISE 222 (314)
Q Consensus 168 ~~~g~~~~~~~~~-~~~~~~~~~~~----~~i~~i~~~~~~~~l~t~~~-------dg~i~vwd~~~ 222 (314)
.+..++-|+... ..|.+.+..|. ..|..-..+++.++++..+- .|.+.+|.+++
T Consensus 124 -T~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 124 -TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp -ESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT
T ss_pred -cCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc
Confidence 345678887753 45666665543 34566667888887654332 25677777654
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.25 E-value=0.48 Score=40.60 Aligned_cols=108 Identities=13% Similarity=0.111 Sum_probs=72.2
Q ss_pred ceeeEEeccCCCeEEEEcCCceEEEEeCCCCC-c---------e--eeeee------cccceEEEEECCCC---CEEEEe
Q 021319 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLR-P---------L--DTVVA------HTAGCYCIAIDPMG---RYFAVG 209 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~---------~--~~~~~------~~~~i~~i~~~~~~---~~l~t~ 209 (314)
++..+..+|.|.++++.+. ..+.+..++... . + +.+.. ...+|..+.|+|-+ ..|++=
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 5777899999999888754 478888876221 1 1 11221 14569999999964 589999
Q ss_pred eCCCeEEEeeCCCcE-EEEEee---------ecccCeEEEEEccCCcEEEE--ecCCceEEE
Q 021319 210 SADSLVSLWDISEML-CVRTFT---------KLEWPVRTISFSHTGDYIAS--ASEDLFIDI 259 (314)
Q Consensus 210 ~~dg~i~vwd~~~~~-~~~~~~---------~~~~~v~~~~~sp~~~~l~s--~s~d~~v~v 259 (314)
..|+.||+||+.... ....+. .....|.+++|.+++-.|.. .+..|-|+-
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 999999999997521 111221 11246889999998765555 457776644
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.94 E-value=0.53 Score=38.36 Aligned_cols=226 Identities=12% Similarity=0.059 Sum_probs=106.2
Q ss_pred CCCCEEEEeeCC----CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeC----C-----CcEEEEeC
Q 021319 30 CTGTKLASGSVD----QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG----D-----KTVRLWDA 96 (314)
Q Consensus 30 ~~g~~l~s~~~D----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~----D-----~~v~iwd~ 96 (314)
-++..++.||.+ ..+.+||..+....... .++. ...-.+++.. ++.+++.|+. + ..+.++|+
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~--~~p~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLA--DLQV-PRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECC--CCSS-CCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECC--CCCc-ccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECC
Confidence 356677777742 35777776543211111 1110 0000122222 2356666665 2 46788898
Q ss_pred CCCceeeeEEecCc--eEEEEEccCCCEEEEEeCC-----CcEEEEEccCCeEeeeeccCcc-eeeEEeccCCCeEEEEc
Q 021319 97 RSGKCSQQAELSGE--NINITYKPDGTHIAVGNRD-----DELTILDVRKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTT 168 (314)
Q Consensus 97 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 168 (314)
.+.+.......... ...++. -+++.++.|+.+ ..+.+||+.+.+.......... ........++..+++++
T Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 98 MTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp TTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeC
Confidence 87765433222111 111222 266777777643 3578889877654332211111 11111122556666655
Q ss_pred CC-----ceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCC-----CeEEEeeCCCcEEEEE--eeeccc
Q 021319 169 GN-----GTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSAD-----SLVSLWDISEMLCVRT--FTKLEW 234 (314)
Q Consensus 169 ~~-----g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~d-----g~i~vwd~~~~~~~~~--~~~~~~ 234 (314)
.+ ..+..|+....+- +..+........++.+ ++++++.|+.+ ..+.+||+.+.+-... +.....
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS 254 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc
Confidence 33 4566776543321 1111111111223333 57777888765 4589999887643321 111111
Q ss_pred CeEEEEEccCCcEEEEecCC-----ceEEEEECCCC
Q 021319 235 PVRTISFSHTGDYIASASED-----LFIDISNVHTG 265 (314)
Q Consensus 235 ~v~~~~~sp~~~~l~s~s~d-----~~v~v~~~~~~ 265 (314)
....+. -++++++.|+.+ ..+.++|..+.
T Consensus 255 ~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 255 ALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp SCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 112222 367777777754 34667776653
No 319
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.91 E-value=0.63 Score=39.00 Aligned_cols=222 Identities=11% Similarity=0.031 Sum_probs=121.9
Q ss_pred CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEe------cCceEEEEEccC---CCEEEEEeC----C----
Q 021319 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL------SGENINITYKPD---GTHIAVGNR----D---- 129 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~------~~~~~~~~~~~~---~~~l~~~~~----d---- 129 (314)
.....++|.|++ .++ .+..++.|+++|. +++ .....+ ......+++.|+ +..|.++.. +
T Consensus 29 ~~P~~ia~~pdG-~l~-V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 29 EVPWSIAPLGGG-RYL-VTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCEEEEEEEETT-EEE-EEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCeEEEEcCCC-eEE-EEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 446788999875 444 4566799999974 454 111111 234677999997 555555443 2
Q ss_pred CcEEEEEccCC-------eEeee-ecc--CcceeeEEeccCCCeEEEEcC-------------CceEEEEeCCCCC----
Q 021319 130 DELTILDVRKF-------KPIHR-RKF--GYEVNEIAWNMTGEMFFLTTG-------------NGTVEVLTYPSLR---- 182 (314)
Q Consensus 130 ~~i~i~d~~~~-------~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~-------------~g~~~~~~~~~~~---- 182 (314)
..|..++.... +.+.. ... ......++|.|++.++++... .|.|..++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 45667765432 11111 111 123467899999987766432 2456555543220
Q ss_pred c---eeee-eecccceEEEEECC-CCCEEEEeeCCC---eEEEeeCCC--------c--------EEEEEeeecccCeEE
Q 021319 183 P---LDTV-VAHTAGCYCIAIDP-MGRYFAVGSADS---LVSLWDISE--------M--------LCVRTFTKLEWPVRT 238 (314)
Q Consensus 183 ~---~~~~-~~~~~~i~~i~~~~-~~~~l~t~~~dg---~i~vwd~~~--------~--------~~~~~~~~~~~~v~~ 238 (314)
+ ...+ .++ ..+..++|+| +++++++-.... .|.+...-. + ..+..+.........
T Consensus 185 pf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 185 PFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp SSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 0 1111 122 2467899999 676655433222 233322100 0 011122111234677
Q ss_pred EEEc-------cCCcEEEEecCCceEEEEECCCC-CeE--EEEec--cCccceeEEcCCCCeeEEEe
Q 021319 239 ISFS-------HTGDYIASASEDLFIDISNVHTG-RTV--HQIPC--RAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 239 ~~~s-------p~~~~l~s~s~d~~v~v~~~~~~-~~~--~~~~~--~~~i~~v~~~~~~~~la~~~ 293 (314)
++|. .+|.++++.-..+.|...++... +.. ..+.. ...+..+++.|++.++++..
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 8883 57888877777788888887643 332 22321 34789999999998776654
No 320
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.86 E-value=1.5 Score=43.00 Aligned_cols=224 Identities=13% Similarity=0.161 Sum_probs=121.2
Q ss_pred CEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCcee--eeEEecCceEEEEEccC------CCEEEEEeC-CCcEEEEEcc
Q 021319 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSGKCS--QQAELSGENINITYKPD------GTHIAVGNR-DDELTILDVR 138 (314)
Q Consensus 68 ~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~------~~~l~~~~~-d~~i~i~d~~ 138 (314)
.|..++.+. . .++.++ .+.+..+.+..+... ....+..++.++++.|. +.++++|.. |++++++++.
T Consensus 515 ~I~~As~n~--~-~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 515 NISVASCNS--S-QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCEEEECS--S-EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEeCC--C-EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 455555543 2 344444 567777776655432 23345667778887653 478999997 9999999998
Q ss_pred CCeEeeeeccCc--ceeeEEec--cCCCeEEEEcCCceEEEEeCCC--CCceee--eeecccceEEEEECCCCCEEEEee
Q 021319 139 KFKPIHRRKFGY--EVNEIAWN--MTGEMFFLTTGNGTVEVLTYPS--LRPLDT--VVAHTAGCYCIAIDPMGRYFAVGS 210 (314)
Q Consensus 139 ~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~--~~~~~~--~~~~~~~i~~i~~~~~~~~l~t~~ 210 (314)
..+.+.....+. ...++... ....+++++..+|.+..+.+.. ...... ...-..++.-..+...+..-+-+.
T Consensus 591 ~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~ 670 (1158)
T 3ei3_A 591 SFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFAC 670 (1158)
T ss_dssp TCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEE
T ss_pred CCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEE
Confidence 877765544422 23333222 2335677888999887776543 221111 111122333333333333322223
Q ss_pred CCCeEEEeeCCCcEEEEEeeecccCeE-EEEEccCC--cEEEEecCCceEEEEECCCC--CeEEEEeccCccceeEEcCC
Q 021319 211 ADSLVSLWDISEMLCVRTFTKLEWPVR-TISFSHTG--DYIASASEDLFIDISNVHTG--RTVHQIPCRAAMNSVEWNPK 285 (314)
Q Consensus 211 ~dg~i~vwd~~~~~~~~~~~~~~~~v~-~~~~sp~~--~~l~s~s~d~~v~v~~~~~~--~~~~~~~~~~~i~~v~~~~~ 285 (314)
.+....+|--........+. .+ ++. ...|+... .-++.++ ++.++|..+.+- -.+++++.+.+++.++++|.
T Consensus 671 s~rp~liy~~~~~l~~s~l~-~~-~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~ 747 (1158)
T 3ei3_A 671 SDRPTVIYSSNHKLVFSNVN-LK-EVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEV 747 (1158)
T ss_dssp SSSCEEEEESSSSEEEEEBS-SS-CCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGG
T ss_pred CCCCEEEEEcCCceEEeccC-hH-HhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCC
Confidence 34444444433322222111 11 232 33465432 3344333 334777776543 24456778889999999999
Q ss_pred CCeeEEEecCCcc
Q 021319 286 YNLLAYAGDDKNK 298 (314)
Q Consensus 286 ~~~la~~~~d~~~ 298 (314)
.+.++.+..+.+.
T Consensus 748 ~~~~~v~~~~~~~ 760 (1158)
T 3ei3_A 748 SQCFGVLSSRIEV 760 (1158)
T ss_dssp GTEEEEEEEEEEE
T ss_pred CCEEEEEEEeccc
Confidence 8887777655443
No 321
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.69 E-value=0.7 Score=37.80 Aligned_cols=184 Identities=9% Similarity=0.024 Sum_probs=93.4
Q ss_pred CcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEe--CCCc--EEEEEccCCeEeeeeccCcceeeEEeccCCCeE
Q 021319 89 KTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGN--RDDE--LTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMF 164 (314)
Q Consensus 89 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~d~~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (314)
..|+..++..++..... .. ....++++++.|+-.. .++. |...++.......-.... . ..+++.+..+
T Consensus 88 ~~Iy~i~~dg~~~~~l~--~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~--~--~~~~~~g~~i 159 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLD--PD--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY--L--FTCNTSDRYF 159 (302)
T ss_dssp EEEEEEETTSCCCEEEE--CS--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC--C--CCSEEETTEE
T ss_pred CeEEEEeCCCCcceEee--cC--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC--c--eEeeEECCEE
Confidence 46777777766432221 11 1235677888888765 3344 444555432211111111 1 3456677777
Q ss_pred EEEcC-CceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCC--CeEEEeeCCCcEEEEEeeecccCeEEEEE
Q 021319 165 FLTTG-NGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSAD--SLVSLWDISEMLCVRTFTKLEWPVRTISF 241 (314)
Q Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~d--g~i~vwd~~~~~~~~~~~~~~~~v~~~~~ 241 (314)
+.... ...|...++........+. +.. ...++|++.+|+-...+ ..|..-++.... .+.+.. ..+ ..|
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~---~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~ 230 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYD---CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHY 230 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEEC---SCE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEE
T ss_pred EEEeCCCceEEEEECCCCCEEEEeC---CCc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceE
Confidence 76654 5677777765543322221 222 23466888887755433 356566665433 233322 223 348
Q ss_pred ccCCcEEEEecC--CceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEe
Q 021319 242 SHTGDYIASASE--DLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 242 sp~~~~l~s~s~--d~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~ 293 (314)
+|++++|.-++. ...|..-++. |...+.+... .+. ++++.+..|....
T Consensus 231 ~~~g~~Iy~~~~~~~~~i~~~~~D-G~~r~~l~~~-~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 231 NVYGSLIFYQRGGDNPALCVVKND-GTGFKELAKG-EFC--NINVTSQYVYFTD 280 (302)
T ss_dssp EEETTEEEEEECSSSCEEEEEETT-SCCCEEEEES-CEE--EEEECSSEEEEEE
T ss_pred EECCCEEEEEECCCCcEEEEEECC-CCccEEeeCC-ccc--eEEEeCCEEEEEE
Confidence 889988876532 3455555553 3333333321 222 4555666665554
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.59 E-value=0.75 Score=37.47 Aligned_cols=224 Identities=12% Similarity=0.070 Sum_probs=107.7
Q ss_pred CEEEEEeC----CCcEEEEeCCCCceeeeEEecCc--eEEEEEccCCCEEEEEeC----C-----CcEEEEEccCCeEee
Q 021319 80 DLIATASG----DKTVRLWDARSGKCSQQAELSGE--NINITYKPDGTHIAVGNR----D-----DELTILDVRKFKPIH 144 (314)
Q Consensus 80 ~~l~s~~~----D~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~----d-----~~i~i~d~~~~~~~~ 144 (314)
.+++.|+. -..+.++|..+++.......... ...++ ..++..++.|+. + ..+.++|+.+.+...
T Consensus 26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~ 104 (308)
T 1zgk_A 26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSP 104 (308)
T ss_dssp CEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEE
T ss_pred EEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeE
Confidence 45555552 23577888877665433221111 11222 225666667665 2 457888887765432
Q ss_pred eeccCc-ceeeEEeccCCCeEEEEcCC-----ceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCCC---
Q 021319 145 RRKFGY-EVNEIAWNMTGEMFFLTTGN-----GTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSADS--- 213 (314)
Q Consensus 145 ~~~~~~-~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg--- 213 (314)
...... .........++..+++++.+ ..+..|+....+- +..+......-.++.+ ++++++.|+.++
T Consensus 105 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 182 (308)
T 1zgk_A 105 CAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNR 182 (308)
T ss_dssp CCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCB
T ss_pred CCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCc
Confidence 211111 11111112255566665432 3566666543321 1111111111122233 577777777653
Q ss_pred --eEEEeeCCCcEEEEE--eeecccCeEEEEEccCCcEEEEecCC-----ceEEEEECCCCCeE--EEEec-cCccceeE
Q 021319 214 --LVSLWDISEMLCVRT--FTKLEWPVRTISFSHTGDYIASASED-----LFIDISNVHTGRTV--HQIPC-RAAMNSVE 281 (314)
Q Consensus 214 --~i~vwd~~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~s~s~d-----~~v~v~~~~~~~~~--~~~~~-~~~i~~v~ 281 (314)
.+.+||+.+..-... +......-..+. -++++++.|+.+ ..+.++|..+.+=. ..++. +..-..+.
T Consensus 183 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 260 (308)
T 1zgk_A 183 LNSAECYYPERNEWRMITAMNTIRSGAGVCV--LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV 260 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred CceEEEEeCCCCeEeeCCCCCCccccceEEE--ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE
Confidence 588899876643221 111111112222 267788888764 45888888764321 11111 11112222
Q ss_pred EcCCCCeeEEEecCCcccccccceEEeccccC
Q 021319 282 WNPKYNLLAYAGDDKNKYQADEGVFRIYGFEN 313 (314)
Q Consensus 282 ~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~~ 313 (314)
. ++.+++.||.+...+ ...+.+|+++.
T Consensus 261 ~--~~~i~v~GG~~~~~~---~~~v~~yd~~~ 287 (308)
T 1zgk_A 261 H--QGRIYVLGGYDGHTF---LDSVECYDPDT 287 (308)
T ss_dssp E--TTEEEEECCBCSSCB---CCEEEEEETTT
T ss_pred E--CCEEEEEcCcCCCcc---cceEEEEcCCC
Confidence 2 677888888765432 34677777754
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.43 E-value=0.96 Score=37.65 Aligned_cols=235 Identities=9% Similarity=-0.015 Sum_probs=107.7
Q ss_pred CCCEEEEeeCC-CcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeC-C---------CcEEEEeCCCC
Q 021319 31 TGTKLASGSVD-QTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASG-D---------KTVRLWDARSG 99 (314)
Q Consensus 31 ~g~~l~s~~~D-~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~-D---------~~v~iwd~~~~ 99 (314)
++..++.||.+ ..+.++|..+....+.....++.....-.+++.. + +.+++.|+. + ..+.++|+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-D-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-T-TEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-C-CEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 66777777643 4677777653222222111111111111122222 2 356666665 2 46788998887
Q ss_pred ceeeeEEec-C--ceEEEEEccCCCEEEEEeCC---------------------------------------CcEEEEEc
Q 021319 100 KCSQQAELS-G--ENINITYKPDGTHIAVGNRD---------------------------------------DELTILDV 137 (314)
Q Consensus 100 ~~~~~~~~~-~--~~~~~~~~~~~~~l~~~~~d---------------------------------------~~i~i~d~ 137 (314)
+........ . ....+.. .+++.++.|+.+ ..+.+||+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 654432222 1 1122222 577788888764 46889998
Q ss_pred cCCeEeeeeccCc--ceeeEEeccCCCeEEEEcC------CceEEEEeCCCCCc----eeeeeecccceEEEEECCCCCE
Q 021319 138 RKFKPIHRRKFGY--EVNEIAWNMTGEMFFLTTG------NGTVEVLTYPSLRP----LDTVVAHTAGCYCIAIDPMGRY 205 (314)
Q Consensus 138 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~----~~~~~~~~~~i~~i~~~~~~~~ 205 (314)
.+.+......... .........++..+++++. ...+..|++..... +..+........+.+...++++
T Consensus 176 ~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i 255 (357)
T 2uvk_A 176 STQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL 255 (357)
T ss_dssp TTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEE
T ss_pred CCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEE
Confidence 8765433222211 1101122234556666542 23455565521111 1111000011111122235677
Q ss_pred EEEeeCC----------------------CeEEEeeCCCcE--EEEEeeecccCeEEEEEccCCcEEEEecCCc------
Q 021319 206 FAVGSAD----------------------SLVSLWDISEML--CVRTFTKLEWPVRTISFSHTGDYIASASEDL------ 255 (314)
Q Consensus 206 l~t~~~d----------------------g~i~vwd~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~------ 255 (314)
++.|+.+ ..+.+||+.+.+ .+..+...... ..+...++++++.|+.+.
T Consensus 256 yv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~ 333 (357)
T 2uvk_A 256 IFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVT 333 (357)
T ss_dssp EEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCEEE
T ss_pred EEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCEee
Confidence 7777732 247788887543 33332222111 122335788888888652
Q ss_pred eEEEEECCCCCeEEE
Q 021319 256 FIDISNVHTGRTVHQ 270 (314)
Q Consensus 256 ~v~v~~~~~~~~~~~ 270 (314)
.+.+.++.+++.+..
T Consensus 334 ~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 334 DSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEEC-CCSCEEE
T ss_pred eEEEEEEcCcEeEee
Confidence 244457766665543
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.34 E-value=0.72 Score=35.73 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=60.2
Q ss_pred eEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcc--------eeeEEeccCCCeEEEEcCCceEEEEeCCCCC
Q 021319 111 NINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYE--------VNEIAWNMTGEMFFLTTGNGTVEVLTYPSLR 182 (314)
Q Consensus 111 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 182 (314)
...++|+|+|.+.++ .++.+.-.+..+.+...-...... -..+.+.+++.++++ .+|.+..++-++..
T Consensus 43 ~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSD 118 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCST
T ss_pred ceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCC
Confidence 447999999987777 666666655543111100001111 257788999999888 55888877654322
Q ss_pred cee-----eeee--cccceEEEEECCCCCEEEEeeCCCeE
Q 021319 183 PLD-----TVVA--HTAGCYCIAIDPMGRYFAVGSADSLV 215 (314)
Q Consensus 183 ~~~-----~~~~--~~~~i~~i~~~~~~~~l~t~~~dg~i 215 (314)
.-. ...+ --..+..+.++|+|.+.|+. |+.+
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 111 1111 11457899999999988877 7664
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.05 E-value=1.2 Score=36.44 Aligned_cols=209 Identities=11% Similarity=0.068 Sum_probs=98.0
Q ss_pred EEEEeeCCCcEEEeecCCCCCCceeeEEeecC-CCCEEEEEEcCCCCCEEEEEeC-----C------CcEEEEeCCCCce
Q 021319 34 KLASGSVDQTARVWHIEPHGHGKVKDIELRGH-ADSVDQLCWDPKHADLIATASG-----D------KTVRLWDARSGKC 101 (314)
Q Consensus 34 ~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~~-----D------~~v~iwd~~~~~~ 101 (314)
+++.|+ ..+.+||..+.. +.. ..++.. ...-.+++. . ++.+++.|+. . ..+..+|..+++.
T Consensus 7 l~~~GG--~~~~~yd~~~~~--W~~-~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANE--CYC-ASLSSQVPKNHVSLVT-K-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTE--EEE-EECCCCSCSSEEEEEC-T-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcC--CceEEECCCCCe--Eec-CCCCCCCCccceEEEE-E-CCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 344555 567888876532 221 222211 112222332 2 3467777773 1 1267789887765
Q ss_pred eeeEEecCceE--EEEEccCCCEEEEEeCC--------CcEEEEEccCCeEeeeeccCc-ceeeEEeccCCCeEEEEcC-
Q 021319 102 SQQAELSGENI--NITYKPDGTHIAVGNRD--------DELTILDVRKFKPIHRRKFGY-EVNEIAWNMTGEMFFLTTG- 169 (314)
Q Consensus 102 ~~~~~~~~~~~--~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 169 (314)
........... .++. -+++.++.|+.+ ..+.++|+.+.+......... .....+...++..+++++.
T Consensus 80 ~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 158 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKG 158 (315)
T ss_dssp EECCCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred EECCCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCC
Confidence 43322221111 1222 256666777642 358889988765432211111 1111122245566666654
Q ss_pred -----CceEEEEeCCCCC--ceeeeeecccceEEEEECCCCCEEEEeeCCC-----eEEEeeCCCcEEEEE--eeecccC
Q 021319 170 -----NGTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSADS-----LVSLWDISEMLCVRT--FTKLEWP 235 (314)
Q Consensus 170 -----~g~~~~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg-----~i~vwd~~~~~~~~~--~~~~~~~ 235 (314)
...+..|+....+ .+..+........++.+ ++++++.|+.++ .+.+||+.+.+-... +......
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS 236 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 1456777765432 11111111111122233 567777777654 488899877643322 1111111
Q ss_pred eEEEEEccCCcEEEEecCC
Q 021319 236 VRTISFSHTGDYIASASED 254 (314)
Q Consensus 236 v~~~~~sp~~~~l~s~s~d 254 (314)
...+ .-++++++.|+.+
T Consensus 237 ~~~~--~~~~~l~v~GG~~ 253 (315)
T 4asc_A 237 LSLV--SLVGTLYAIGGFA 253 (315)
T ss_dssp CEEE--EETTEEEEEEEEE
T ss_pred eeEE--EECCEEEEECCcc
Confidence 1222 2366777777754
No 326
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.03 E-value=1.6 Score=37.98 Aligned_cols=102 Identities=8% Similarity=0.168 Sum_probs=58.6
Q ss_pred ceeeEEeccCCCeEEEEcCCceEEEEeCCCCCc--eeeee------ecccceEEEEECCC---CCEEEEeeC--------
Q 021319 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP--LDTVV------AHTAGCYCIAIDPM---GRYFAVGSA-------- 211 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~------~~~~~i~~i~~~~~---~~~l~t~~~-------- 211 (314)
....++|.|++.++++-...+.|.+++....+. +..+. ........|+++|+ +..|.....
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 456788999998777766556788876543321 11111 02356789999995 444443332
Q ss_pred -----CCeEEEeeCCCc-------EEE-EEeee-cccCeEEEEEccCCcEEEEec
Q 021319 212 -----DSLVSLWDISEM-------LCV-RTFTK-LEWPVRTISFSHTGDYIASAS 252 (314)
Q Consensus 212 -----dg~i~vwd~~~~-------~~~-~~~~~-~~~~v~~~~~sp~~~~l~s~s 252 (314)
...|.-++.... +.+ ..+.. .......|+|.|||.+.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554321 111 11221 123478899999998777654
No 327
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.94 E-value=0.97 Score=35.02 Aligned_cols=140 Identities=11% Similarity=0.020 Sum_probs=80.5
Q ss_pred ceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccc--------eEEEEECCCCCEEEEeeCCCeEEEeeCCC
Q 021319 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAG--------CYCIAIDPMGRYFAVGSADSLVSLWDISE 222 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------i~~i~~~~~~~~l~t~~~dg~i~vwd~~~ 222 (314)
....++++|++.++++ .+|.++..+..+.... ...+-... -.++.|+|+|.+.++ .||.|.-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcc-cccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5668999999998887 7777766664332211 11111112 368899999998887 569887777532
Q ss_pred cEE------EEEeeecc-cCeEEEEEccCCcEEEEecCCceEEEEECCCCC------eEEEEec-cCc-cceeEEcCCCC
Q 021319 223 MLC------VRTFTKLE-WPVRTISFSHTGDYIASASEDLFIDISNVHTGR------TVHQIPC-RAA-MNSVEWNPKYN 287 (314)
Q Consensus 223 ~~~------~~~~~~~~-~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~------~~~~~~~-~~~-i~~v~~~~~~~ 287 (314)
... -..+.... ..+..|.|.|+|.+-|.. |+.+.=....++. ....+.. ... -+-+.|.|++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 100 01111111 257889999999988877 7664323222211 0111211 111 23367999988
Q ss_pred eeEEEecCCccc
Q 021319 288 LLAYAGDDKNKY 299 (314)
Q Consensus 288 ~la~~~~d~~~~ 299 (314)
+.+.. ++.+|
T Consensus 195 l~~v~--~g~~Y 204 (236)
T 1tl2_A 195 LFGVQ--GGKFY 204 (236)
T ss_dssp EEEEE--TTEEE
T ss_pred EEEEe--CCeEE
Confidence 87765 55554
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.76 E-value=1.1 Score=39.07 Aligned_cols=104 Identities=10% Similarity=0.033 Sum_probs=61.2
Q ss_pred cceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEE--EEEeee------cccCeEEEEEccC----CcEEEEecC------
Q 021319 192 AGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC--VRTFTK------LEWPVRTISFSHT----GDYIASASE------ 253 (314)
Q Consensus 192 ~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~--~~~~~~------~~~~v~~~~~sp~----~~~l~s~s~------ 253 (314)
.....|+|.|+|+++++--..+.|++++..++.. +..+.. .......|+|+|+ +.+.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 4578999999999877654445788887654432 222221 1234668999995 444444332
Q ss_pred ------CceEEEEECCCC--C-----eEE-EEecc--CccceeEEcCCCCeeEEEecC
Q 021319 254 ------DLFIDISNVHTG--R-----TVH-QIPCR--AAMNSVEWNPKYNLLAYAGDD 295 (314)
Q Consensus 254 ------d~~v~v~~~~~~--~-----~~~-~~~~~--~~i~~v~~~~~~~~la~~~~d 295 (314)
...|.-++...+ + .+. .++.. -....++|.|++.+.++.|+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCT
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCC
Confidence 234544544221 1 111 12221 136799999999988887754
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.70 E-value=1.6 Score=36.45 Aligned_cols=222 Identities=13% Similarity=0.081 Sum_probs=117.3
Q ss_pred CCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeee---E---E--ecCceEEEEEccC---CCEEEEEeC-------
Q 021319 67 DSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQ---A---E--LSGENINITYKPD---GTHIAVGNR------- 128 (314)
Q Consensus 67 ~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~---~---~--~~~~~~~~~~~~~---~~~l~~~~~------- 128 (314)
.....++|.|++..++ .+...+.|++++.. +..... . . .......++++|+ +..|.+...
T Consensus 18 ~~P~~i~~~pdG~~l~-V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGML-ITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEE-EEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEE-EEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3467899999753255 45567999999853 332111 1 0 1223467899996 455554432
Q ss_pred -CCcEEEEEccCC-------eEeee-ec----cCcceeeEEeccCCCeEEEEcC-------------CceEEEEeCCCCC
Q 021319 129 -DDELTILDVRKF-------KPIHR-RK----FGYEVNEIAWNMTGEMFFLTTG-------------NGTVEVLTYPSLR 182 (314)
Q Consensus 129 -d~~i~i~d~~~~-------~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~-------------~g~~~~~~~~~~~ 182 (314)
...|..+++... +.+.. .. .......++|.|++.++++.+. .|.|..++....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 124555555321 11111 11 0122457999999976666543 2466666654321
Q ss_pred ------------ceeeee-ecccceEEEEECC-CCCEEEEeeC-CCeEEEeeCCCcE-----------------------
Q 021319 183 ------------PLDTVV-AHTAGCYCIAIDP-MGRYFAVGSA-DSLVSLWDISEML----------------------- 224 (314)
Q Consensus 183 ------------~~~~~~-~~~~~i~~i~~~~-~~~~l~t~~~-dg~i~vwd~~~~~----------------------- 224 (314)
....+. ++ ..+..++|+| +++++++-.. ++.=.|.-+..+.
T Consensus 176 p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 111111 22 3478899999 6665553221 1111221111110
Q ss_pred --------EEEEeeecccCeEEEEEcc-------CCcEEEEecCCceEEEEECCCCCeEEEEe----ccCccceeEEcCC
Q 021319 225 --------CVRTFTKLEWPVRTISFSH-------TGDYIASASEDLFIDISNVHTGRTVHQIP----CRAAMNSVEWNPK 285 (314)
Q Consensus 225 --------~~~~~~~~~~~v~~~~~sp-------~~~~l~s~s~d~~v~v~~~~~~~~~~~~~----~~~~i~~v~~~~~ 285 (314)
.+..+. +......+.|.. +|.++++.-..+.|...++..++...... ....+..|++.|+
T Consensus 255 ~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 255 EIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp SSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 011111 122456677753 57777777777888877776654443321 1247889999999
Q ss_pred CCeeEEE
Q 021319 286 YNLLAYA 292 (314)
Q Consensus 286 ~~~la~~ 292 (314)
|.++++.
T Consensus 334 G~lyv~t 340 (353)
T 2g8s_A 334 GYLYVLT 340 (353)
T ss_dssp SCEEEEE
T ss_pred CcEEEEE
Confidence 9876643
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.66 E-value=1.5 Score=35.79 Aligned_cols=225 Identities=12% Similarity=0.104 Sum_probs=107.2
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeeEEec---CceEEEEEccCCCEEEEEeC-----C------CcEEEEEccCCeEeeee
Q 021319 81 LIATASGDKTVRLWDARSGKCSQQAELS---GENINITYKPDGTHIAVGNR-----D------DELTILDVRKFKPIHRR 146 (314)
Q Consensus 81 ~l~s~~~D~~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~-----d------~~i~i~d~~~~~~~~~~ 146 (314)
+++.|+ ..+..||..+++... .... ..........+++.++.|+. . ..+.++|+.+.+.....
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344454 578899998887543 2221 11222333457778888873 1 12677888776543221
Q ss_pred ccCcc-eeeEEeccCCCeEEEEcCC--------ceEEEEeCCCCC--ceeeeeecccceEEEEECCCCCEEEEeeC-C--
Q 021319 147 KFGYE-VNEIAWNMTGEMFFLTTGN--------GTVEVLTYPSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSA-D-- 212 (314)
Q Consensus 147 ~~~~~-~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~t~~~-d-- 212 (314)
....+ ........++..+++++.+ ..+..|+....+ .+..+......-.++. .++++++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDR 161 (315)
T ss_dssp CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTS
T ss_pred CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCC
Confidence 11111 1111112245556665521 346667664432 1111111111112222 35677777776 2
Q ss_pred ---CeEEEeeCCCcEEEEEeeecccC-eEEEEEccCCcEEEEecCCc-----eEEEEECCCCCeEE--EEec-cCcccee
Q 021319 213 ---SLVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASEDL-----FIDISNVHTGRTVH--QIPC-RAAMNSV 280 (314)
Q Consensus 213 ---g~i~vwd~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~s~s~d~-----~v~v~~~~~~~~~~--~~~~-~~~i~~v 280 (314)
..+.+||..+..-.. +.....+ ....+..-++++++.|+.++ .+.++|..+.+=.. .++. +..-..+
T Consensus 162 ~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKE-LAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp CBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred cccceEEEEeCCCCeEEE-CCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 358899987764322 1111111 11112223678888887653 47888887653211 1111 1111222
Q ss_pred EEcCCCCeeEEEecCCccc------ccccceEEeccccC
Q 021319 281 EWNPKYNLLAYAGDDKNKY------QADEGVFRIYGFEN 313 (314)
Q Consensus 281 ~~~~~~~~la~~~~d~~~~------~~~~~~~~~~~~~~ 313 (314)
.+ ++.+++.||.+.... ......+.+|+++.
T Consensus 241 ~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 241 SL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp EE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred EE--CCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 33 567888888753210 01224566777653
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.84 E-value=4 Score=37.64 Aligned_cols=188 Identities=9% Similarity=0.053 Sum_probs=96.9
Q ss_pred CCEEEEEeCC----CcEEEEeCCCCceeeeE-E-----ecC--ceEEEEEcc-CCCEEEEEeCCC------cEEEEEccC
Q 021319 79 ADLIATASGD----KTVRLWDARSGKCSQQA-E-----LSG--ENINITYKP-DGTHIAVGNRDD------ELTILDVRK 139 (314)
Q Consensus 79 ~~~l~s~~~D----~~v~iwd~~~~~~~~~~-~-----~~~--~~~~~~~~~-~~~~l~~~~~d~------~i~i~d~~~ 139 (314)
+.+++.||.+ ..+.++|..+++..... . ... ...+++..+ +++.++.|+.++ .+.+||+.+
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t 477 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT 477 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC
Confidence 4567777653 45778888877654433 2 111 112233333 777778877543 577888887
Q ss_pred CeEeeeeccC--cceeeEEeccCCCeEEEEcCCc--eEEEEeCCCCCc--eee---eeecccceEEEEECCC-CCEEEEe
Q 021319 140 FKPIHRRKFG--YEVNEIAWNMTGEMFFLTTGNG--TVEVLTYPSLRP--LDT---VVAHTAGCYCIAIDPM-GRYFAVG 209 (314)
Q Consensus 140 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~--~~~---~~~~~~~i~~i~~~~~-~~~l~t~ 209 (314)
.+........ ..-...+...++..+++++.++ .+.+|+....+- +.. .........++.++.+ +++++.|
T Consensus 478 ~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~G 557 (695)
T 2zwa_A 478 REWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILG 557 (695)
T ss_dssp TEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEEC
T ss_pred CcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEEC
Confidence 5543322111 1112222223677777776443 577777654321 110 1111111233555554 6777778
Q ss_pred eC--C-----CeEEEeeCCCcEE-----EEEeee---cccCeEEEEEccCCcEEEEecCC--------ceEEEEECCCCC
Q 021319 210 SA--D-----SLVSLWDISEMLC-----VRTFTK---LEWPVRTISFSHTGDYIASASED--------LFIDISNVHTGR 266 (314)
Q Consensus 210 ~~--d-----g~i~vwd~~~~~~-----~~~~~~---~~~~v~~~~~sp~~~~l~s~s~d--------~~v~v~~~~~~~ 266 (314)
+. + ..+..||+.+..- -..+.. ....-.++....++++++.|+.+ ..+.++|..+.+
T Consensus 558 G~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 558 GGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp CBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred CcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 76 2 3588999876651 112211 11111122233347888888743 458889987754
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.81 E-value=4 Score=37.65 Aligned_cols=195 Identities=9% Similarity=0.051 Sum_probs=97.3
Q ss_pred cCCCEEEEEeCC----CcEEEEEccCCeEeeee-c-------cCcceeeEEecc-CCCeEEEEcCC------ceEEEEeC
Q 021319 118 PDGTHIAVGNRD----DELTILDVRKFKPIHRR-K-------FGYEVNEIAWNM-TGEMFFLTTGN------GTVEVLTY 178 (314)
Q Consensus 118 ~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~-~-------~~~~~~~~~~~~-~~~~~~~~~~~------g~~~~~~~ 178 (314)
.++..++.|+.+ ..+.+||+.+.+..... . ....-..++... ++..+++|+.+ ..+.+|+.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456667777643 45788888765443222 1 111112222222 66666666532 34566665
Q ss_pred CCCC--ceeeeeecccceEEEEECCCCCEEEEeeCCC--eEEEeeCCCcEEEEEee-----ecccCeEEEEEccC-CcEE
Q 021319 179 PSLR--PLDTVVAHTAGCYCIAIDPMGRYFAVGSADS--LVSLWDISEMLCVRTFT-----KLEWPVRTISFSHT-GDYI 248 (314)
Q Consensus 179 ~~~~--~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg--~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~sp~-~~~l 248 (314)
...+ .+..+..-.. -.+++.-.++++++.|+.++ .+.+||..+..-...-. .....-.++.+..+ ++++
T Consensus 476 ~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 4421 1111111011 11233324788888888765 68999998765332211 01111233555555 7788
Q ss_pred EEecC--C-----ceEEEEECCCCCe-----EEEEec---cCccc-eeEEcCCCCeeEEEecCCcccccccceEEecccc
Q 021319 249 ASASE--D-----LFIDISNVHTGRT-----VHQIPC---RAAMN-SVEWNPKYNLLAYAGDDKNKYQADEGVFRIYGFE 312 (314)
Q Consensus 249 ~s~s~--d-----~~v~v~~~~~~~~-----~~~~~~---~~~i~-~v~~~~~~~~la~~~~d~~~~~~~~~~~~~~~~~ 312 (314)
+.|+. + ..+.+||..+.+- -..+.. ..... ++....++.+++.||.+...-......+.+|+++
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 88875 2 3588899887661 112211 11111 2222233778888886543211224567777765
Q ss_pred C
Q 021319 313 N 313 (314)
Q Consensus 313 ~ 313 (314)
.
T Consensus 635 t 635 (695)
T 2zwa_A 635 S 635 (695)
T ss_dssp T
T ss_pred C
Confidence 3
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.60 E-value=2.8 Score=34.99 Aligned_cols=236 Identities=12% Similarity=0.061 Sum_probs=122.4
Q ss_pred eecccccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeE-Ee----ecCCCCEEEEEEcCC---CCCEEEEE--
Q 021319 16 YTGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDI-EL----RGHADSVDQLCWDPK---HADLIATA-- 85 (314)
Q Consensus 16 ~~gH~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~-~~----~~h~~~v~~l~~~~~---~~~~l~s~-- 85 (314)
+..--..-..++|.|||.++++--..|.|++++.+.. ....+ .+ .........++++|+ ++.+.++-
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g---~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG---RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTC---CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCC---cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 3334456789999999998888766888888864321 11111 11 123456789999985 33333332
Q ss_pred eCCCcEEEEeCCCC-----ce-----ee-eEEec--CceEEEEEccCCCEEEEEeC-------------CCcEEEEEccC
Q 021319 86 SGDKTVRLWDARSG-----KC-----SQ-QAELS--GENINITYKPDGTHIAVGNR-------------DDELTILDVRK 139 (314)
Q Consensus 86 ~~D~~v~iwd~~~~-----~~-----~~-~~~~~--~~~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~ 139 (314)
..+..|.-|....+ .. +. ..... ...-.+.|.|||.+.++.+. .+.|.-++...
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC
Confidence 24556666655442 11 11 11111 11234889999987766442 24444444432
Q ss_pred CeE-------eeeeccC-cceeeEEeccCCCeEEEEcCC---ceEEEEeCC--------C--------CCceeeeeeccc
Q 021319 140 FKP-------IHRRKFG-YEVNEIAWNMTGEMFFLTTGN---GTVEVLTYP--------S--------LRPLDTVVAHTA 192 (314)
Q Consensus 140 ~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~--------~--------~~~~~~~~~~~~ 192 (314)
.-+ ...+..+ .....++|++++.++++-... ..+...... . ..++..+..+..
T Consensus 184 ~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 184 EPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA 263 (347)
T ss_dssp SBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred CccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence 100 0001111 234568899987776665432 223332110 0 012222222223
Q ss_pred ceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEE----EEEeeecccCeEEEEEccCCcEEEEe-cCCc
Q 021319 193 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC----VRTFTKLEWPVRTISFSHTGDYIASA-SEDL 255 (314)
Q Consensus 193 ~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~----~~~~~~~~~~v~~~~~sp~~~~l~s~-s~d~ 255 (314)
....++|. ++.++...-..+.|....+..... ...+.+....+..|+..|||.++++- ..||
T Consensus 264 ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 264 SPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp CEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred CCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCCCC
Confidence 56677776 466666665566666666654432 12222333568889999999866654 3443
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.55 E-value=3.3 Score=35.72 Aligned_cols=219 Identities=11% Similarity=0.142 Sum_probs=129.6
Q ss_pred CCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCC
Q 021319 41 DQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDG 120 (314)
Q Consensus 41 D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (314)
+.+|.|-|+..... ....... -.+...+|.. ++++--. ..++.|+|+.+........+....+-..|-.+.
T Consensus 47 ~~~vvIiDl~~~~~--~~rrpi~-----AdsAIMnP~~-~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~ 117 (494)
T 1bpo_A 47 QAQVVIIDMNDPSN--PIRRPIS-----ADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN 117 (494)
T ss_dssp CCEEEEEETTSTTS--CEEEECC-----CSEEEECSSS-SCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETT
T ss_pred CCeEEEEECCCCCc--ceecccc-----cceeeeCCCC-cEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCC
Confidence 34677777765332 1111111 2345678874 5665544 689999999999988888887877777776554
Q ss_pred CEEEEEeCCCcEEEEEccC-CeEeeeec-----cCcceeeEEeccCCCeEEEEc---C----CceEEEEeCCCCCceeee
Q 021319 121 THIAVGNRDDELTILDVRK-FKPIHRRK-----FGYEVNEIAWNMTGEMFFLTT---G----NGTVEVLTYPSLRPLDTV 187 (314)
Q Consensus 121 ~~l~~~~~d~~i~i~d~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---~----~g~~~~~~~~~~~~~~~~ 187 (314)
.|+..+ +..+.-|++.. ..|++-.. .+.++....-+++.+.++..+ . .|.+.+|..+.. ..+.+
T Consensus 118 -~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~i 194 (494)
T 1bpo_A 118 -TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPI 194 (494)
T ss_dssp -EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEE
T ss_pred -eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchh
Confidence 444443 35788899853 23322211 234555555667777665432 1 256666665433 23445
Q ss_pred eecccceEEEEECCC---CCEEEEeeCC---CeEEEeeCCCc--------E-EEEEeeec---ccCeEEEEEccCCcEEE
Q 021319 188 VAHTAGCYCIAIDPM---GRYFAVGSAD---SLVSLWDISEM--------L-CVRTFTKL---EWPVRTISFSHTGDYIA 249 (314)
Q Consensus 188 ~~~~~~i~~i~~~~~---~~~l~t~~~d---g~i~vwd~~~~--------~-~~~~~~~~---~~~v~~~~~sp~~~~l~ 249 (314)
.+|...-..+.+..+ .+.++-+.+. +.+++.++... + .+..+... .+-.-++..|+....+.
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 666554433333221 1234444332 68888888432 1 11111111 12245578889889999
Q ss_pred EecCCceEEEEECCCCCeEEEE
Q 021319 250 SASEDLFIDISNVHTGRTVHQI 271 (314)
Q Consensus 250 s~s~d~~v~v~~~~~~~~~~~~ 271 (314)
.-+.-|.++++|+.++..+..-
T Consensus 275 viTK~G~i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMN 296 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEE
T ss_pred EEecCceEEEEecccceeeeee
Confidence 9999999999999999988654
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.45 E-value=2.9 Score=34.69 Aligned_cols=227 Identities=9% Similarity=0.043 Sum_probs=104.6
Q ss_pred CEEEEEeC-CCcEEEEeCCC--CceeeeEEec-Cc--eEEEEEccCCCEEEEEeC-C---------CcEEEEEccCCeEe
Q 021319 80 DLIATASG-DKTVRLWDARS--GKCSQQAELS-GE--NINITYKPDGTHIAVGNR-D---------DELTILDVRKFKPI 143 (314)
Q Consensus 80 ~~l~s~~~-D~~v~iwd~~~--~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~~~-d---------~~i~i~d~~~~~~~ 143 (314)
.+++.|+. ...+.++|... .+......+. .. ..+++ .-++++++.|+. + ..+.+||+.+.+..
T Consensus 21 ~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~ 99 (357)
T 2uvk_A 21 TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSA-FIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWV 99 (357)
T ss_dssp EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEE-EETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEE
T ss_pred EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEE-EECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEE
Confidence 45555543 34677888763 3333222222 11 11122 225667777765 2 46888998876543
Q ss_pred eeeccC-c-ceeeEEeccCCCeEEEEcCC---------------------------------------ceEEEEeCCCCC
Q 021319 144 HRRKFG-Y-EVNEIAWNMTGEMFFLTTGN---------------------------------------GTVEVLTYPSLR 182 (314)
Q Consensus 144 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~---------------------------------------g~~~~~~~~~~~ 182 (314)
...... . .....+...++..+++++.+ ..+.+|+....+
T Consensus 100 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 179 (357)
T 2uvk_A 100 KLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQ 179 (357)
T ss_dssp ECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTE
T ss_pred ECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCc
Confidence 322111 1 11111222567777777654 467777765432
Q ss_pred --ceeeeeecccceEEEEECCCCCEEEEeeCC------CeEEEeeC--CCcEEEEEeeeccc---CeEEEEEccCCcEEE
Q 021319 183 --PLDTVVAHTAGCYCIAIDPMGRYFAVGSAD------SLVSLWDI--SEMLCVRTFTKLEW---PVRTISFSHTGDYIA 249 (314)
Q Consensus 183 --~~~~~~~~~~~i~~i~~~~~~~~l~t~~~d------g~i~vwd~--~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~ 249 (314)
.+..+..-...-.+++. .++++++.|+.+ ..+..||+ .+..-. .+..... .....+...++++++
T Consensus 180 W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~~~~~~~~~~~~~~~~iyv 257 (357)
T 2uvk_A 180 WSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSSPDGVAGGFAGISNDSLIF 257 (357)
T ss_dssp EEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEE-ECCCSSTTTCCBSCEEEEETTEEEE
T ss_pred EEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCCCcccccceEEEECCEEEE
Confidence 11111100011012222 256677777642 34677776 333221 2211111 111123345678888
Q ss_pred EecCC----------------------ceEEEEECCCCC--eEEEEeccCccceeEEcCCCCeeEEEecCCcccccccce
Q 021319 250 SASED----------------------LFIDISNVHTGR--TVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQADEGV 305 (314)
Q Consensus 250 s~s~d----------------------~~v~v~~~~~~~--~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~~~~~~~~~ 305 (314)
.|+.+ ..+.++|..+.+ .+..++. .+....+...++.+++.||.+..... ...
T Consensus 258 ~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~--~~~ 334 (357)
T 2uvk_A 258 AGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ-GRAYGVSLPWNNSLLIIGGETAGGKA--VTD 334 (357)
T ss_dssp ECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSS-CCBSSEEEEETTEEEEEEEECGGGCE--EEE
T ss_pred EcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCC-CcccceeEEeCCEEEEEeeeCCCCCE--eee
Confidence 78732 246788887543 3333332 11212223346888899997754321 244
Q ss_pred EEecccc
Q 021319 306 FRIYGFE 312 (314)
Q Consensus 306 ~~~~~~~ 312 (314)
+.++.++
T Consensus 335 v~~l~~~ 341 (357)
T 2uvk_A 335 SVLITVK 341 (357)
T ss_dssp EEEEEC-
T ss_pred EEEEEEc
Confidence 5555554
No 336
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.45 E-value=2.1 Score=37.33 Aligned_cols=105 Identities=13% Similarity=0.073 Sum_probs=61.1
Q ss_pred cceEEEEECCCCC-EEEEeeCCCeEEEeeCCCcE---EEEEeee---------cccCeEEEEEccC----CcEEEEecC-
Q 021319 192 AGCYCIAIDPMGR-YFAVGSADSLVSLWDISEML---CVRTFTK---------LEWPVRTISFSHT----GDYIASASE- 253 (314)
Q Consensus 192 ~~i~~i~~~~~~~-~l~t~~~dg~i~vwd~~~~~---~~~~~~~---------~~~~v~~~~~sp~----~~~l~s~s~- 253 (314)
..+..|+|.|+|+ .|+++.+.|.|++++..... .+..+.. .......|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4578999999996 34456788999999754221 1122110 1345788999997 444333222
Q ss_pred -C----------ceEEEEECCC----------CCeEEEEeccC---ccceeEEcCCCCeeEEEecCC
Q 021319 254 -D----------LFIDISNVHT----------GRTVHQIPCRA---AMNSVEWNPKYNLLAYAGDDK 296 (314)
Q Consensus 254 -d----------~~v~v~~~~~----------~~~~~~~~~~~---~i~~v~~~~~~~~la~~~~d~ 296 (314)
+ ..|.-+.+.. .+.+..++... .-..++|.||+.+.++.|+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1333344321 12333333111 256899999999988888654
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.58 E-value=6.3 Score=39.46 Aligned_cols=171 Identities=11% Similarity=0.140 Sum_probs=100.5
Q ss_pred CCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEE
Q 021319 88 DKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLT 167 (314)
Q Consensus 88 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (314)
..+|-|.|+.++..+...+... -+.-++|..+.++.-. ...+.|+|+.+...++......++.-..|-.....-++
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A--dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lV- 122 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA--DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV- 122 (1630)
T ss_pred CceEEEEECCCCCCcccccccc--hhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEE-
Confidence 3467788877654332222211 1234678888877765 67899999988777777666667777777544433333
Q ss_pred cCCceEEEEeCC-CCCceeeeeec----ccceEEEEECCCCCEEEEee-------CCCeEEEeeCCCcEEEEEeeecccC
Q 021319 168 TGNGTVEVLTYP-SLRPLDTVVAH----TAGCYCIAIDPMGRYFAVGS-------ADSLVSLWDISEMLCVRTFTKLEWP 235 (314)
Q Consensus 168 ~~~g~~~~~~~~-~~~~~~~~~~~----~~~i~~i~~~~~~~~l~t~~-------~dg~i~vwd~~~~~~~~~~~~~~~~ 235 (314)
.+..|.-|+.. ...|.+.+..| +..|..-..+++.++++..| -.|.+.+|.+++.. -+.+.+|...
T Consensus 123 -T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~ 200 (1630)
T 1xi4_A 123 -TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAAS 200 (1630)
T ss_pred -cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhh
Confidence 45578888875 34555555544 34566667788888876332 34778888876542 2344555443
Q ss_pred eEEEEEc--cC-CcEEEEecC---CceEEEEECCC
Q 021319 236 VRTISFS--HT-GDYIASASE---DLFIDISNVHT 264 (314)
Q Consensus 236 v~~~~~s--p~-~~~l~s~s~---d~~v~v~~~~~ 264 (314)
...+... |. ...++-+.. .++++|-++..
T Consensus 201 F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~ 235 (1630)
T 1xi4_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGT 235 (1630)
T ss_pred hheeccCCCCCCceEEEEEEecCCCceEEEEecCC
Confidence 3222221 11 123332222 26888888754
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.41 E-value=9.9 Score=38.15 Aligned_cols=194 Identities=12% Similarity=0.177 Sum_probs=110.6
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccC-CeEeeee---
Q 021319 71 QLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRK-FKPIHRR--- 146 (314)
Q Consensus 71 ~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~--- 146 (314)
+...+|.. ++++-- ...++.|+|+.+........+...++-..|-.+.. |+..+ +..+.-|++.. ..|++-.
T Consensus 70 sAIMnP~~-~iiALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 70 SAIMNPAS-KVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hhccCCCc-ceEEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 34567764 455544 36899999999888888877777777777765543 43332 35788898853 2332111
Q ss_pred --ccCcceeeEEeccCCCeEEEEc-------CCceEEEEeCCCCCceeeeeecccceEEEEEC--CC-CCEEEEeeC---
Q 021319 147 --KFGYEVNEIAWNMTGEMFFLTT-------GNGTVEVLTYPSLRPLDTVVAHTAGCYCIAID--PM-GRYFAVGSA--- 211 (314)
Q Consensus 147 --~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~--~~-~~~l~t~~~--- 211 (314)
..+.++..-.-+++.+.++..+ -.|.+.+|...... .+.+.||...-..+.+. +. .+.++.+.+
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 1134444445566666554332 23666666654322 22344554433222221 11 123332222
Q ss_pred CCeEEEeeCCCc-----EE----EEEeee----cccCeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEE
Q 021319 212 DSLVSLWDISEM-----LC----VRTFTK----LEWPVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQ 270 (314)
Q Consensus 212 dg~i~vwd~~~~-----~~----~~~~~~----~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~ 270 (314)
.+.+++-++... .. +..+.. .+. ..++..|+....+..-+.-|.++++|+.||..+..
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Df-pv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDF-PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCc-ceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 267888887432 00 111111 122 33467788888888999999999999999987743
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.11 E-value=2.3 Score=37.82 Aligned_cols=90 Identities=10% Similarity=0.170 Sum_probs=61.4
Q ss_pred cEEEEeCCC----C-ceeeeEEecCceEEEEEccCCCEEEEEeC-CCcEEEEEccCCeE-------------eeeeccCc
Q 021319 90 TVRLWDARS----G-KCSQQAELSGENINITYKPDGTHIAVGNR-DDELTILDVRKFKP-------------IHRRKFGY 150 (314)
Q Consensus 90 ~v~iwd~~~----~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~-------------~~~~~~~~ 150 (314)
.|.+.|.+. + ...........+-.+..+|||+++++++. +.++.++|.++... ....+.+.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 366666654 2 22333444445556788999999987664 77899999875321 22334555
Q ss_pred ceeeEEeccCCCeEEEEcCCceEEEEeCC
Q 021319 151 EVNEIAWNMTGEMFFLTTGNGTVEVLTYP 179 (314)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 179 (314)
.....+|.++|..+.+..-+..+.-|++.
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred cccEEEECCCCceEeeeeecceEEEEecc
Confidence 67788999999777777789999999864
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.07 E-value=4.2 Score=33.08 Aligned_cols=217 Identities=11% Similarity=0.093 Sum_probs=102.9
Q ss_pred cEEEEeCCCCceeeeEEec---CceEEEEEccCCCEEEEEeCC----C-------cEEEEEccCCeEeeeeccCcc-eee
Q 021319 90 TVRLWDARSGKCSQQAELS---GENINITYKPDGTHIAVGNRD----D-------ELTILDVRKFKPIHRRKFGYE-VNE 154 (314)
Q Consensus 90 ~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d----~-------~i~i~d~~~~~~~~~~~~~~~-~~~ 154 (314)
.+..||..+++... .... ..........++..++.|+.. + .+..+|+.+.+.......... ...
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 47889988877544 2221 112223344577788888731 1 167788876654332111111 111
Q ss_pred EEeccCCCeEEEEcCC-------ceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEEeeCC------CeEEEee
Q 021319 155 IAWNMTGEMFFLTTGN-------GTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAVGSAD------SLVSLWD 219 (314)
Q Consensus 155 ~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t~~~d------g~i~vwd 219 (314)
.....++..+++++.+ ..+.+|+....+- +..+......-.++. .++++++.|+.+ ..+.+||
T Consensus 104 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp EEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEE
T ss_pred ceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEc
Confidence 1112356666666542 3456666543321 111110001111222 357777777642 3589999
Q ss_pred CCCcEEEEE--eeecccCeEEEEEccCCcEEEEecCC-----ceEEEEECCCCCe--EEEEec-cCccceeEEcCCCCee
Q 021319 220 ISEMLCVRT--FTKLEWPVRTISFSHTGDYIASASED-----LFIDISNVHTGRT--VHQIPC-RAAMNSVEWNPKYNLL 289 (314)
Q Consensus 220 ~~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~s~s~d-----~~v~v~~~~~~~~--~~~~~~-~~~i~~v~~~~~~~~l 289 (314)
+.+.+-... +.........+. -++++++.|+.+ ..+.++|..+.+= +..++. +..-..+. .++.++
T Consensus 182 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~ 257 (318)
T 2woz_A 182 PKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLY 257 (318)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEE
T ss_pred CCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEE
Confidence 887653322 111111112222 367777777653 3467888776532 111211 11112222 257788
Q ss_pred EEEecCCccc------ccccceEEeccccC
Q 021319 290 AYAGDDKNKY------QADEGVFRIYGFEN 313 (314)
Q Consensus 290 a~~~~d~~~~------~~~~~~~~~~~~~~ 313 (314)
+.||.+.... ......+.+|++++
T Consensus 258 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 258 AIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp EECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred EECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 8888654210 11235567777754
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.72 E-value=0.76 Score=38.24 Aligned_cols=113 Identities=7% Similarity=0.026 Sum_probs=68.5
Q ss_pred CeEEEEcCCceEEEEeCCCCCceeeeeecc-cceEEEE---ECCCCCEEEEe-eCCCeEEEeeCCCcEEEEEeeec----
Q 021319 162 EMFFLTTGNGTVEVLTYPSLRPLDTVVAHT-AGCYCIA---IDPMGRYFAVG-SADSLVSLWDISEMLCVRTFTKL---- 232 (314)
Q Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~i~~i~---~~~~~~~l~t~-~~dg~i~vwd~~~~~~~~~~~~~---- 232 (314)
..+++++.+|.+..++..+++..-++.... .++.... ...++..++.. ..||.+..+|..++.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 356777888888888877766555443321 1111111 00133444444 68999999999888554433211
Q ss_pred ccCeEE----EEEc----cCCcEEEEecCCceEEEEECCCCCeEEEEecc
Q 021319 233 EWPVRT----ISFS----HTGDYIASASEDLFIDISNVHTGRTVHQIPCR 274 (314)
Q Consensus 233 ~~~v~~----~~~s----p~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~ 274 (314)
..|+.. +-.. ..+..+++|+.++.+...|..+|+.+.++...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 112211 0000 15678889999999999999999999988643
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.51 E-value=4.8 Score=32.68 Aligned_cols=173 Identities=12% Similarity=0.044 Sum_probs=80.2
Q ss_pred CCCEEEEEeC----CC-------cEEEEeCCCCceeeeEEecCc--eEEEEEccCCCEEEEEeCC-------CcEEEEEc
Q 021319 78 HADLIATASG----DK-------TVRLWDARSGKCSQQAELSGE--NINITYKPDGTHIAVGNRD-------DELTILDV 137 (314)
Q Consensus 78 ~~~~l~s~~~----D~-------~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d-------~~i~i~d~ 137 (314)
++.+++.|+. ++ .+..+|..+.+.......... ...++. .+++.++.|+.+ ..+.++|+
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeC
Confidence 3567777773 12 167788887765443222111 111222 266777777754 24778888
Q ss_pred cCCeEeeeeccCcc-eeeEEeccCCCeEEEEcC------CceEEEEeCCCCCc--eeeeeecccceEEEEECCCCCEEEE
Q 021319 138 RKFKPIHRRKFGYE-VNEIAWNMTGEMFFLTTG------NGTVEVLTYPSLRP--LDTVVAHTAGCYCIAIDPMGRYFAV 208 (314)
Q Consensus 138 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~l~t 208 (314)
.+.+.......... ....+...++..+++++. ...+..|+....+- +..+........++.+ ++++++.
T Consensus 135 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 212 (318)
T 2woz_A 135 VAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIA 212 (318)
T ss_dssp TTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred CCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEE
Confidence 77654332221111 111111245666666643 23577777654321 1111111111122223 5677777
Q ss_pred eeCCC-----eEEEeeCCCcEEEEEeeecccC-eEEEEEccCCcEEEEecCC
Q 021319 209 GSADS-----LVSLWDISEMLCVRTFTKLEWP-VRTISFSHTGDYIASASED 254 (314)
Q Consensus 209 ~~~dg-----~i~vwd~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~s~s~d 254 (314)
|+.++ .+.+||+.+.+-.. +.....+ ....+...++++++.|+.+
T Consensus 213 GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 213 GGVTEDGLSASVEAFDLKTNKWEV-MTEFPQERSSISLVSLAGSLYAIGGFA 263 (318)
T ss_dssp EEEETTEEEEEEEEEETTTCCEEE-CCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred cCcCCCCccceEEEEECCCCeEEE-CCCCCCcccceEEEEECCEEEEECCee
Confidence 76542 47788887654322 1111111 1111122457777777654
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.20 E-value=5.8 Score=33.03 Aligned_cols=226 Identities=16% Similarity=0.133 Sum_probs=118.1
Q ss_pred CCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEe-------cCceEEEEEccC---CCEEEEE-e--CCCc
Q 021319 65 HADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL-------SGENINITYKPD---GTHIAVG-N--RDDE 131 (314)
Q Consensus 65 h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~l~~~-~--~d~~ 131 (314)
.-.....++|.|++ .++++--..|.|++++...++......+ ......++++|+ +..|.+. + .+..
T Consensus 30 gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 34556789999975 5766655589999998766654222111 234567999985 4455443 2 3444
Q ss_pred EEEEEccC----------CeEeee-ec--cCcceeeEEeccCCCeEEEEcC-------------CceEEEEeCCCC----
Q 021319 132 LTILDVRK----------FKPIHR-RK--FGYEVNEIAWNMTGEMFFLTTG-------------NGTVEVLTYPSL---- 181 (314)
Q Consensus 132 i~i~d~~~----------~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~-------------~g~~~~~~~~~~---- 181 (314)
|.-+.+.. .+.+.. .. .......++|.+++.++++.+. .|.|..++....
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 55555433 122211 11 1123456899999987776542 355555554322
Q ss_pred Cce---eee-eecccceEEEEECCCCCEEEEe-eCCCeEEEeeCCCcEE------------------EEEeeecccCeEE
Q 021319 182 RPL---DTV-VAHTAGCYCIAIDPMGRYFAVG-SADSLVSLWDISEMLC------------------VRTFTKLEWPVRT 238 (314)
Q Consensus 182 ~~~---~~~-~~~~~~i~~i~~~~~~~~l~t~-~~dg~i~vwd~~~~~~------------------~~~~~~~~~~v~~ 238 (314)
.+. ..+ .+| ..+..++|+|+|++.++- +.|+.=.|.-+..+.. +..+..+......
T Consensus 189 nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G 267 (347)
T 3das_A 189 NPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSG 267 (347)
T ss_dssp CSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEE
T ss_pred CCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcc
Confidence 111 111 133 246789999988766543 2233222222222110 1111111123455
Q ss_pred EEEccCCcEEEEecCCceEEEEECCCCCeE---EEEec--cCccceeEEcCCCCeeEEEe
Q 021319 239 ISFSHTGDYIASASEDLFIDISNVHTGRTV---HQIPC--RAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 239 ~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~---~~~~~--~~~i~~v~~~~~~~~la~~~ 293 (314)
++|. +|..+...-....|....+...+.. ..+.. .++++.|+..|+|.++++..
T Consensus 268 ~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 268 IAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred eEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 6665 3555555544555544444433211 12211 35789999999998876554
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.97 E-value=8.3 Score=34.43 Aligned_cols=107 Identities=18% Similarity=0.267 Sum_probs=70.5
Q ss_pred cceeeEEeccCCCeEEEEc-CCceEEEEeCCCC---------Cceeeee---ecccceEEEEECCCCCEEEEeeCCCeEE
Q 021319 150 YEVNEIAWNMTGEMFFLTT-GNGTVEVLTYPSL---------RPLDTVV---AHTAGCYCIAIDPMGRYFAVGSADSLVS 216 (314)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~---------~~~~~~~---~~~~~i~~i~~~~~~~~l~t~~~dg~i~ 216 (314)
.....+..+|+|+++++++ .+.++.++++... .+...+. .-..++...+|+++|....+---|..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 3456678899999988876 5789999987632 1111111 1245678999999996666777899999
Q ss_pred EeeCCCc----------EEEEEeeecccCeEEEEE------ccCCcEEEEe---cCCceE
Q 021319 217 LWDISEM----------LCVRTFTKLEWPVRTISF------SHTGDYIASA---SEDLFI 257 (314)
Q Consensus 217 vwd~~~~----------~~~~~~~~~~~~v~~~~~------sp~~~~l~s~---s~d~~v 257 (314)
-|++... ..++++..| ..+..+.- .|+|++|++. |.|..+
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~-YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl 461 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVH-YQPGHLHASLCETNEADGKWLVALSKFSKDRFL 461 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECS-SCEEEEEETTTTSTTCCSCEEEEEESCCTTSSC
T ss_pred EEeccHHHHHhcCccCCeeeeccccc-cCCcccccCCCccCCCCccEEEEecccccccCc
Confidence 9998653 345554333 23333433 5788999887 456443
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.84 E-value=5.7 Score=32.31 Aligned_cols=163 Identities=9% Similarity=0.059 Sum_probs=86.9
Q ss_pred EEEccCCCEEEEEeCC--------------CcEEEEEccCCeEeeeeccCcceeeEEeccCCCeEEEEc----CCceEEE
Q 021319 114 ITYKPDGTHIAVGNRD--------------DELTILDVRKFKPIHRRKFGYEVNEIAWNMTGEMFFLTT----GNGTVEV 175 (314)
Q Consensus 114 ~~~~~~~~~l~~~~~d--------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~ 175 (314)
--+++++.+|+-.... ..|...++...+...-. .. ....+++.++.++... ....+..
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~--~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD--PD--PCIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE--CS--CEEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee--cC--CccEEEEeCCEEEEEeecCCCCceEEE
Confidence 3457788888755432 24555555443321111 11 1235677888877765 3445555
Q ss_pred EeCCCCCceeeeeecccceEEEEECCCCCEEEEeeC-CCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCC
Q 021319 176 LTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSA-DSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASED 254 (314)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~-dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d 254 (314)
.++.... ...+..+.. .+++++++.|+-.+. ...|..-++........+. .+.. ..++|++.+|+-...+
T Consensus 134 ~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 134 IRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGG
T ss_pred EECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcC
Confidence 5555433 223333322 346777887764443 5678888887665433332 2222 3466999988865543
Q ss_pred --ceEEEEECCCCCeEEEEeccCccceeEEcCCCCeeEEEe
Q 021319 255 --LFIDISNVHTGRTVHQIPCRAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 255 --~~v~v~~~~~~~~~~~~~~~~~i~~v~~~~~~~~la~~~ 293 (314)
..|..-++..+. ...+. ...+ ..|+|++.+|..+.
T Consensus 205 ~~~~I~~~~ldG~~-~~~Lt-~~~~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 205 RDNAIVHVNINNPN-PVVLT-EANI--EHYNVYGSLIFYQR 241 (302)
T ss_dssp GTTEEEEECSSSCC-CEECS-CSCE--EEEEEETTEEEEEE
T ss_pred CCcEEEEEECCCCC-eEEEe-CCCc--ceEEECCCEEEEEE
Confidence 356555554433 22332 2222 34777777776553
No 346
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=90.74 E-value=6 Score=32.38 Aligned_cols=178 Identities=11% Similarity=0.084 Sum_probs=95.9
Q ss_pred cCCCEEEEEeCCCcEEEEEccCCeEeee---------eccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCC------
Q 021319 118 PDGTHIAVGNRDDELTILDVRKFKPIHR---------RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLR------ 182 (314)
Q Consensus 118 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~------ 182 (314)
++...+++.+.+|.++-..+...+.... .+.+-.+..+......+.+++.+..|.++.+......
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4556778888999999887766543221 1112233344444556677788888888777543211
Q ss_pred ---ceeee-e-ecccceEEE-EECC--CCCEEEEeeCCCeEEEeeCCCcE-------EEEEeeecccCeEEEEEccCCcE
Q 021319 183 ---PLDTV-V-AHTAGCYCI-AIDP--MGRYFAVGSADSLVSLWDISEML-------CVRTFTKLEWPVRTISFSHTGDY 247 (314)
Q Consensus 183 ---~~~~~-~-~~~~~i~~i-~~~~--~~~~l~t~~~dg~i~vwd~~~~~-------~~~~~~~~~~~v~~~~~sp~~~~ 247 (314)
++... . .....+..+ .... +..+++..+.+|.++--.+.... ..-.+.. ...+-.+.....+..
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCE
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCE
Confidence 11111 0 112234333 3321 45678888999998888875432 1112222 334555554445567
Q ss_pred EEEecCCceEEEEECCC----CC-----eEEEEeccCccceeEEcCCCCeeEEEecCC
Q 021319 248 IASASEDLFIDISNVHT----GR-----TVHQIPCRAAMNSVEWNPKYNLLAYAGDDK 296 (314)
Q Consensus 248 l~s~s~d~~v~v~~~~~----~~-----~~~~~~~~~~i~~v~~~~~~~~la~~~~d~ 296 (314)
++.++.+|.+..+.... ++ ....+.....|.++..-+++..++..+..+
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G 222 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENG 222 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTS
T ss_pred EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCC
Confidence 88889998887776543 22 112222234555555444455555666544
No 347
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=87.29 E-value=11 Score=31.11 Aligned_cols=225 Identities=13% Similarity=0.147 Sum_probs=119.5
Q ss_pred EECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC-ceeeeE
Q 021319 27 AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG-KCSQQA 105 (314)
Q Consensus 27 ~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~-~~~~~~ 105 (314)
-.+|..+.||--. ..+++|+|+++.. +.....+ ...|.-=.|... +.|+-. .+..|.-|++... ...+.+
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~--klks~~~---~e~VvfWkWis~--~~L~lV-T~taVyHWs~~~~s~P~kvF 143 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKS--KMKAHTM---TDDVTFWKWISL--NTVALV-TDNAVYHWSMEGESQPVKMF 143 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTE--EEEEEEC---SSCEEEEEECSS--SEEEEE-ESSEEEEEESSTTCCCEEEE
T ss_pred eeCCCccEEEEec-CCeEEEechHHhh--hhcceec---CCccEEEEecCC--CeEEEE-cCCcEEEEcccCCCCCceee
Confidence 3467777665554 5789999998632 2222222 344544455433 344333 3468999998643 222222
Q ss_pred Ee-----cCceEEEEEccCCCEEEEEeC-------CCcEEEEEccCCeEeeeeccCcceeeEEeccCCC-----eEEEEc
Q 021319 106 EL-----SGENINITYKPDGTHIAVGNR-------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTGE-----MFFLTT 168 (314)
Q Consensus 106 ~~-----~~~~~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 168 (314)
.. ...++.-..+++.+++++.+. .|.+.+|..++.....- .++...-..+-.+++ .+.++.
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i--eGhaa~F~~~~~~g~~~~~~lf~fa~ 221 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI--EGHAASFAQFKMEGNAEESTLFCFAV 221 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEE--CCSEEEEEEECCTTCSSCEEEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccccee--eeeeeeeEEEecCCCCCCceEEEEEE
Confidence 21 234567778889998876553 34567777665432111 011111112222221 222221
Q ss_pred ---CCceEEEEeCCCC---C-ceee-----eee---cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc
Q 021319 169 ---GNGTVEVLTYPSL---R-PLDT-----VVA---HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE 233 (314)
Q Consensus 169 ---~~g~~~~~~~~~~---~-~~~~-----~~~---~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~ 233 (314)
..+++++.+.... . +... +.. -..-+-++.+++.-..+..-++-|.+++||+.++.++..-.-..
T Consensus 222 r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~ 301 (365)
T 2xzh_A 222 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 301 (365)
T ss_dssp EETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC
Confidence 2368888876321 1 1111 100 12235678888888888888999999999999998886544344
Q ss_pred cCeEEEEEccCCcEEEEecCCceEEEEEC
Q 021319 234 WPVRTISFSHTGDYIASASEDLFIDISNV 262 (314)
Q Consensus 234 ~~v~~~~~sp~~~~l~s~s~d~~v~v~~~ 262 (314)
.+|-..+-+....=++.....|.|.--.+
T Consensus 302 d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 302 ETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp SCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred CceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 44444443333333333334444443333
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.51 E-value=22 Score=34.15 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=33.3
Q ss_pred CeEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe
Q 021319 235 PVRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP 272 (314)
Q Consensus 235 ~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~ 272 (314)
.+.+++..++..++++-+.|+.+++|++.+++.+....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677788889999999999999999999999887764
No 349
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=78.18 E-value=33 Score=29.70 Aligned_cols=225 Identities=12% Similarity=0.113 Sum_probs=119.8
Q ss_pred EECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC-ceeeeE
Q 021319 27 AWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG-KCSQQA 105 (314)
Q Consensus 27 ~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~-~~~~~~ 105 (314)
-.+|..+.||--. ..+++|+|+++.. +.....+ ..+.|+.=..++ +.|+-. .+..|.-|++... ...+.+
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~--klks~~~--~e~VvfWkWis~---~~l~lV-T~taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKS--KMKAHTM--TDDVTFWKWISL---NTVALV-TDNAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTE--EEEEEEC--SSCCCEEEEEET---TEEEEE-CSSEEEEEESSSSCCCEEEE
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhh--hhcceec--CCCceEEEecCC---CeEEEE-cCCeeEEecccCCCCchhhe
Confidence 3566666655544 6899999998632 2222222 334444433343 234322 4579999998643 222222
Q ss_pred Ee-----cCceEEEEEccCCCEEEEEeC-------CCcEEEEEccCCeEeeeeccCcceeeEEeccCC-----CeEEEEc
Q 021319 106 EL-----SGENINITYKPDGTHIAVGNR-------DDELTILDVRKFKPIHRRKFGYEVNEIAWNMTG-----EMFFLTT 168 (314)
Q Consensus 106 ~~-----~~~~~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 168 (314)
.. ...++.-..+++.++++..+. .|.+.+|..++.....- .++...-..+-.+| ..+.++.
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i--eGhaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI--EGHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEE--CCSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchh--eeeeeeeEEEecCCCCCCceEEEEEE
Confidence 21 234567778899999886543 35577777655322110 01111111222222 1223332
Q ss_pred C---CceEEEEeCCCC---C-ceee-----ee---ecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecc
Q 021319 169 G---NGTVEVLTYPSL---R-PLDT-----VV---AHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLE 233 (314)
Q Consensus 169 ~---~g~~~~~~~~~~---~-~~~~-----~~---~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~ 233 (314)
. .+.+++...... . +... +. .-..-+-++.+++.-..+..-.+-|.+++||+.++.++..-.-..
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 2 378888876322 1 1111 00 012235688888888888889999999999999998886544344
Q ss_pred cCeEEEEEccCCcEEEEecCCceEEEEEC
Q 021319 234 WPVRTISFSHTGDYIASASEDLFIDISNV 262 (314)
Q Consensus 234 ~~v~~~~~sp~~~~l~s~s~d~~v~v~~~ 262 (314)
.+|-..+-+....=++.....|.|.--.+
T Consensus 301 ~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 301 ETIFVTAPHEATAGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp SCEEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred CceEEecccCCCCcEEEEccCceEEEEEE
Confidence 44444444333333333344444433333
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.03 E-value=3.4 Score=37.96 Aligned_cols=71 Identities=7% Similarity=0.128 Sum_probs=43.4
Q ss_pred ccCCcEEEEecCCceEEEEECCCCCeEEEEeccCcc--ceeEEcC---CCCeeEEEecCCcccc-cccceEEecccc
Q 021319 242 SHTGDYIASASEDLFIDISNVHTGRTVHQIPCRAAM--NSVEWNP---KYNLLAYAGDDKNKYQ-ADEGVFRIYGFE 312 (314)
Q Consensus 242 sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~~~~~i--~~v~~~~---~~~~la~~~~d~~~~~-~~~~~~~~~~~~ 312 (314)
.++..+|++-+.|..+++|++.++..+......... ..-...| .+++|-..+.-=..|. .+.|.+|+|.+.
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~~l~ 304 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMGTLL 304 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEEEEE
Confidence 345789999999999999999999988776541110 0001222 2344433321111122 467899999873
No 351
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=76.01 E-value=31 Score=28.30 Aligned_cols=175 Identities=11% Similarity=0.043 Sum_probs=93.7
Q ss_pred EEEEEeCCCcEEEEEccCCeEee---------eeccCcceeeEEeccCCCeEEEEcCCceEEEEeC---CCC------Cc
Q 021319 122 HIAVGNRDDELTILDVRKFKPIH---------RRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTY---PSL------RP 183 (314)
Q Consensus 122 ~l~~~~~d~~i~i~d~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~------~~ 183 (314)
.+++-+.+|.|+-..+..++... ..+.+-.+..+........+++-+..|.++.... +.. .+
T Consensus 5 v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~ 84 (327)
T 3uc1_A 5 VVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQH 84 (327)
T ss_dssp EEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEE
Confidence 45666777777776654322111 1111222333444455666777777787766643 322 11
Q ss_pred eeeee--ecccceEEE-EECC--CCCEEEEeeCCCeEEEeeCCCcEE-------EEEeeecccCeEEEEEccCCcEEEEe
Q 021319 184 LDTVV--AHTAGCYCI-AIDP--MGRYFAVGSADSLVSLWDISEMLC-------VRTFTKLEWPVRTISFSHTGDYIASA 251 (314)
Q Consensus 184 ~~~~~--~~~~~i~~i-~~~~--~~~~l~t~~~dg~i~vwd~~~~~~-------~~~~~~~~~~v~~~~~sp~~~~l~s~ 251 (314)
+..+. .....|..+ .+.. +..++++.+.+|.++--.+..... .-.++. ...+..+........|+..
T Consensus 85 i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~ 163 (327)
T 3uc1_A 85 VANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLV 163 (327)
T ss_dssp HHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEE
T ss_pred HHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEE
Confidence 11111 122334443 4442 578999999999999888754321 112222 2345555555556678888
Q ss_pred cCCceEEEEECC--C----CC-----eEEEEeccCccceeEEcCCCCeeEEEecCCc
Q 021319 252 SEDLFIDISNVH--T----GR-----TVHQIPCRAAMNSVEWNPKYNLLAYAGDDKN 297 (314)
Q Consensus 252 s~d~~v~v~~~~--~----~~-----~~~~~~~~~~i~~v~~~~~~~~la~~~~d~~ 297 (314)
+..|.+..+.+. . ++ .+..+.....|.++..-+....|+..+..+.
T Consensus 164 T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~ 220 (327)
T 3uc1_A 164 SANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGY 220 (327)
T ss_dssp ETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSE
T ss_pred ECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCc
Confidence 888888777766 2 22 1112223345666655555556666765543
No 352
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=74.45 E-value=54 Score=30.27 Aligned_cols=249 Identities=10% Similarity=0.055 Sum_probs=130.2
Q ss_pred cccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEe--ecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCC
Q 021319 20 KKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIEL--RGHADSVDQLCWDPKHADLIATASGDKTVRLWDAR 97 (314)
Q Consensus 20 ~~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~ 97 (314)
.+.|+++.-..+|..-+ |..+| |..||-.. ...... ......|.++....+ ..|..|..+| +..+|..
T Consensus 21 ~n~V~~I~qD~~G~lWi-gT~~G-L~ryDG~~-----~~~~~~~~~~~~~~i~~i~~d~~--g~lWigT~~G-l~~yd~~ 90 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWI-GSNKG-LFSYDGYS-----TQQHFTYGENNNTRIYCGVIIDN--TYLYMGTDNG-ILVYNYR 90 (758)
T ss_dssp CCCEEEEEECTTSCEEE-EESSC-EEEECSSC-----EEECSCTTSTTSSCEEEEEEETT--TEEEEEETTE-EEEEETT
T ss_pred cceEEEEEECCCCCEEE-EECCC-ccccCCCc-----eEEEEccCCCCCceEEEEEEcCC--CcEEEEeCCC-eEEEeCC
Confidence 56799999888886533 23456 33444211 010000 012345788776654 3555566554 7889987
Q ss_pred CCceeeeEE-ecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEeee--e---ccCcceeeEEeccCCCeEEEEcCCc
Q 021319 98 SGKCSQQAE-LSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHR--R---KFGYEVNEIAWNMTGEMFFLTTGNG 171 (314)
Q Consensus 98 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~g 171 (314)
+.+...... ....+..+.. .++ .|.+++.+ .+..+|..+.+...- . .....+.++....++...+. +.+|
T Consensus 91 ~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~~G 166 (758)
T 3ott_A 91 ADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVG-TYNG 166 (758)
T ss_dssp TTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEE-ETTE
T ss_pred CCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEE-eCCC
Confidence 765432111 1112333332 344 56667665 688888765432211 0 11223555555556666554 3443
Q ss_pred eEEEEeCCCCCceeeee--e----cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCC
Q 021319 172 TVEVLTYPSLRPLDTVV--A----HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTG 245 (314)
Q Consensus 172 ~~~~~~~~~~~~~~~~~--~----~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~ 245 (314)
+..++....+. ..+. . ....|.++..++++..|-.|.. +.+..+|..+.+...........|.++...++|
T Consensus 167 -l~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g 243 (758)
T 3ott_A 167 -LCRYIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNG 243 (758)
T ss_dssp -EEEEETTTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTC
T ss_pred -HhhCccCCCce-EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCC
Confidence 55565433221 1111 0 1123788888877665444553 458889987664322111123357888888888
Q ss_pred cEEEEecCCceEEEEECCCCCeEEEEec---------cCccceeEEcCCCCe
Q 021319 246 DYIASASEDLFIDISNVHTGRTVHQIPC---------RAAMNSVEWNPKYNL 288 (314)
Q Consensus 246 ~~l~s~s~d~~v~v~~~~~~~~~~~~~~---------~~~i~~v~~~~~~~~ 288 (314)
.+.+. +.+| +.+++..+++.. .+.+ ...|.++.--+++.+
T Consensus 244 ~lWig-T~~G-l~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~l 292 (758)
T 3ott_A 244 DLLAG-TDNG-LYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHNI 292 (758)
T ss_dssp CEEEE-ETTE-EEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCCE
T ss_pred CEEEE-eCCc-eeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCCE
Confidence 87664 3444 777877665432 2211 124666666555554
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=72.11 E-value=42 Score=28.00 Aligned_cols=50 Identities=10% Similarity=-0.014 Sum_probs=26.1
Q ss_pred CeEEEEEccC-CcEEEEecCCceEEEEECCCCCeEEEEec--------------cCccceeEEcCC
Q 021319 235 PVRTISFSHT-GDYIASASEDLFIDISNVHTGRTVHQIPC--------------RAAMNSVEWNPK 285 (314)
Q Consensus 235 ~v~~~~~sp~-~~~l~s~s~d~~v~v~~~~~~~~~~~~~~--------------~~~i~~v~~~~~ 285 (314)
.+.+|.++|. ...|..+..++.+...+ ..|+.-..+.. ...+.+++++|+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~ 242 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPA 242 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSS
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCC
Confidence 4778999984 34444454444444332 22332222211 123778999986
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=70.77 E-value=38 Score=26.96 Aligned_cols=241 Identities=12% Similarity=0.014 Sum_probs=112.9
Q ss_pred cEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEeecCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC-c
Q 021319 22 KVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELRGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSG-K 100 (314)
Q Consensus 22 ~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~-~ 100 (314)
.|..|+-......++ . ||.|..|......+-..+. . ....|..++.... ..++. . |+.|..|-.... +
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~---~-~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gq 93 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPA---A-TQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQ 93 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCG---G-GGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTST
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCc---c-CCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCC
Confidence 566666544333333 4 8999999865543211111 1 1234666665432 23333 4 899999975432 2
Q ss_pred eeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEee-eeccCcceeeEEeccCCCeEEEEcCCceEEEEeCC
Q 021319 101 CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIH-RRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYP 179 (314)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 179 (314)
+-........+..++.-.. +.+.-. ++.+..|-....-.+. .......+..++ ......++.. +|.+..|-..
T Consensus 94 lg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~--~G~~~~~~l~-~G~v~~wG~n 167 (282)
T 3qhy_B 94 TTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALD--GGVYTALAVK-NGGVIAWGDN 167 (282)
T ss_dssp TCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEE--ECSSEEEEEE-TTEEEEEECC
T ss_pred CCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEE--cccCEEEEEE-CCEEEEecCC
Confidence 2111112234444443322 222223 7777777543321111 011112233332 2223333333 7888888654
Q ss_pred CCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEeeecccCeEEEEEccCCcEEEEecCCceEEE
Q 021319 180 SLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFSHTGDYIASASEDLFIDI 259 (314)
Q Consensus 180 ~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v 259 (314)
....+.........+..++....- .++. .||.|..|-....-.+-.-......|..|+....-.++++ |+.+..
T Consensus 168 ~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~ 241 (282)
T 3qhy_B 168 YFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIA 241 (282)
T ss_dssp TTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEE
T ss_pred CCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEE
Confidence 322111111113456666665433 2343 5889999975432111110111234666765444444443 899999
Q ss_pred EECCCCCeEEEEeccCccceeEEcCCCCe
Q 021319 260 SNVHTGRTVHQIPCRAAMNSVEWNPKYNL 288 (314)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 288 (314)
|-.....++. ....|.+|+-.+...+
T Consensus 242 wG~n~~gq~~---v~~~v~~iaaG~~h~~ 267 (282)
T 3qhy_B 242 WGSSRTAPSS---VQSGVSSIEAGPNAAY 267 (282)
T ss_dssp ESTTCCCCGG---GSSCEEEEEECSSCEE
T ss_pred ecCCCCcccc---CCCCcEEEEECcCeEE
Confidence 9765533322 1235666766654433
No 355
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.77 E-value=22 Score=31.87 Aligned_cols=59 Identities=10% Similarity=0.164 Sum_probs=41.8
Q ss_pred CeEEEEEccCCcEEE-EecC-----------CceEEEEECCCCCeEEEEe--ccCccceeEEcCCCCeeEEEe
Q 021319 235 PVRTISFSHTGDYIA-SASE-----------DLFIDISNVHTGRTVHQIP--CRAAMNSVEWNPKYNLLAYAG 293 (314)
Q Consensus 235 ~v~~~~~sp~~~~l~-s~s~-----------d~~v~v~~~~~~~~~~~~~--~~~~i~~v~~~~~~~~la~~~ 293 (314)
....|.|+++|.+.+ |=.. ...+...+..+|++...+. ...+++.++|+||++.|..+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 356799999999877 4221 1257777777787655543 245789999999998876554
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=69.99 E-value=20 Score=35.19 Aligned_cols=36 Identities=19% Similarity=0.193 Sum_probs=30.5
Q ss_pred eEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 194 CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 194 i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
+.+++..++.+++++-+.|+++|+|++.+++|+.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 445566678889999999999999999999998774
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=69.89 E-value=26 Score=31.52 Aligned_cols=57 Identities=14% Similarity=0.227 Sum_probs=40.8
Q ss_pred eEEEEEccCCcEEEEecCC------------ceEEEEECCCCCeEEEE--eccCccceeEEcCCCCeeEEE
Q 021319 236 VRTISFSHTGDYIASASED------------LFIDISNVHTGRTVHQI--PCRAAMNSVEWNPKYNLLAYA 292 (314)
Q Consensus 236 v~~~~~sp~~~~l~s~s~d------------~~v~v~~~~~~~~~~~~--~~~~~i~~v~~~~~~~~la~~ 292 (314)
...|+|+|.|.+++.-..+ ..+.+.+..++++.+.+ +...+++.+.|+|+++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 5779999999977654322 24566677777766544 346789999999999877554
No 358
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=68.12 E-value=44 Score=26.61 Aligned_cols=181 Identities=13% Similarity=-0.012 Sum_probs=82.6
Q ss_pred CEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCC-ceeeeEEecCceEEEEEccCCCEEEEEeCCCcEEEEEccCCeEee-e
Q 021319 68 SVDQLCWDPKHADLIATASGDKTVRLWDARSG-KCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIH-R 145 (314)
Q Consensus 68 ~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~ 145 (314)
.|..++.-.. ..++. . |+.|..|-.... +.-........+..++.-.. ..+++ . |+.+..|-....-.+. .
T Consensus 25 ~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 4666665332 23333 4 899999975432 21111111223333443322 22333 3 6777777543221110 0
Q ss_pred eccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCceeeeeecccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEE
Q 021319 146 RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLC 225 (314)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~ 225 (314)
.+....+..++- .....++.. +|.++.|-....-.+.........+..++....-..++ . ||.|..|-....-.
T Consensus 98 ~~~~~~v~~ia~--G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAA--GAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEE--ETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTTST
T ss_pred cccCCCeEEEEC--cCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCCCC
Confidence 111123333332 233444445 88888886543221111111234466666544332222 2 68888886543211
Q ss_pred EEEeeecccCeEEEEEccCCcEEEEecCCceEEEEECCC
Q 021319 226 VRTFTKLEWPVRTISFSHTGDYIASASEDLFIDISNVHT 264 (314)
Q Consensus 226 ~~~~~~~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~ 264 (314)
+..-......|..|+.-..-. ++. .|+.+..|-...
T Consensus 172 lg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 172 TTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNR 207 (282)
T ss_dssp TSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCT
T ss_pred CCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCC
Confidence 111111234566676544333 333 599999997654
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.65 E-value=6.4 Score=38.65 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=31.8
Q ss_pred eEEEEEccCCcEEEEecCCceEEEEECCCCCeEEEEe
Q 021319 236 VRTISFSHTGDYIASASEDLFIDISNVHTGRTVHQIP 272 (314)
Q Consensus 236 v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~~~~~~ 272 (314)
+.+++..++..++++-+.|+.+++|++.++..+....
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4456677888999999999999999999999888765
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=67.61 E-value=33 Score=30.68 Aligned_cols=60 Identities=17% Similarity=0.092 Sum_probs=40.8
Q ss_pred ceEEEEECCCCCEEEEeeC------------CCeEEEeeCCCcEEEEEeeec-ccCeEEEEEccCCcEEEEec
Q 021319 193 GCYCIAIDPMGRYFAVGSA------------DSLVSLWDISEMLCVRTFTKL-EWPVRTISFSHTGDYIASAS 252 (314)
Q Consensus 193 ~i~~i~~~~~~~~l~t~~~------------dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~s~s 252 (314)
.+..|.|+++|.+.+..+. ...|..++..+++....+... ...+..++|+||+++|..+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4678999999988773322 125667777666554434332 34689999999999988663
No 361
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=67.21 E-value=78 Score=29.18 Aligned_cols=234 Identities=11% Similarity=0.064 Sum_probs=123.0
Q ss_pred ccEEEEEECCCCCEEEEeeCCCcEEEeecCCCCCCceeeEEee-----cCCCCEEEEEEcCCCCCEEEEEeCCCcEEEEe
Q 021319 21 KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKDIELR-----GHADSVDQLCWDPKHADLIATASGDKTVRLWD 95 (314)
Q Consensus 21 ~~V~~v~~s~~g~~l~s~~~D~~v~iw~~~~~~~~~~~~~~~~-----~h~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd 95 (314)
..|.++.-..+|.+-+.. .+| +..++............... -....|.++.-..++ .+ ..|. ++-+..+|
T Consensus 324 ~~v~~i~~D~~g~lWiGt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~l-Wigt-~~GL~~~~ 398 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWFGG-ANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQ-QL-WIAT-DGSINRYD 398 (758)
T ss_dssp CBEEEEEECTTCCEEEEE-TTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTS-CE-EEEE-TTEEEEEE
T ss_pred ceEEEEEEcCCCCEEEee-CCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCC-CE-EEEe-CCcHhhcC
Confidence 468888888888765543 455 44444332111111111100 012458888776653 33 3444 45789999
Q ss_pred CCCCceeeeEEec-------CceEEEEEccCCCEEEEEeCCCcEEEEEccCC-----eEee---ee--c---cCcceeeE
Q 021319 96 ARSGKCSQQAELS-------GENINITYKPDGTHIAVGNRDDELTILDVRKF-----KPIH---RR--K---FGYEVNEI 155 (314)
Q Consensus 96 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~---~~--~---~~~~~~~~ 155 (314)
..+++........ ..+.++...+++ .|.+|+..+.+..+|..+. .... .. . ....+.++
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 477 (758)
T 3ott_A 399 YATRQFIHYNIVDNTGTYNTNWTYYIFEDTAG-QLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQI 477 (758)
T ss_dssp TTTTEEEEEEEECCC--CBSSSEEEEEECTTS-EEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEE
T ss_pred cCCCcEEEeecCCCcCCCCCceEEEEEEcCCC-CEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeE
Confidence 8877654322111 123445555554 5667877778888886531 1111 11 1 11236667
Q ss_pred EeccCCCeEEEEcCCceEEEEeCCCCCceeeeee----cccceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe--
Q 021319 156 AWNMTGEMFFLTTGNGTVEVLTYPSLRPLDTVVA----HTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF-- 229 (314)
Q Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~-- 229 (314)
....++...+.++..+-+..++....+ +..+.. ....+.++..+.+|++.+. +.+ .+..+|..+.+.. .+
T Consensus 478 ~~d~~g~lWi~~~t~~Gl~~~d~~~~~-~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~-~~~~ 553 (758)
T 3ott_A 478 IPDNEGNVWVLLYNNKGIDKINPRTRE-VTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDESQQ-SISF 553 (758)
T ss_dssp EECTTSCEEEEETTCSSEEEEETTTTE-EEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--CCCC-BCCC
T ss_pred EEcCCCCEEEEccCCCCcEEEeCCCCc-eEEecCCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCCceE-Eecc
Confidence 777777776644444556667654432 212211 1245788888988887654 344 4888887554321 11
Q ss_pred eec-ccCeEEEEEccCCcEEEEecCCceEEEEECCCCCe
Q 021319 230 TKL-EWPVRTISFSHTGDYIASASEDLFIDISNVHTGRT 267 (314)
Q Consensus 230 ~~~-~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~~~~ 267 (314)
.+. ...|.++... +|.+.++. ..| +..++..+.+.
T Consensus 554 ~gl~~~~i~~i~~~-~g~lWi~t-~~G-l~~~~~~~~~~ 589 (758)
T 3ott_A 554 GSFSNNEILSMTCV-KNSIWVST-TNG-LWIIDRKTMDA 589 (758)
T ss_dssp CC---CCEEEEEEE-TTEEEEEE-SSC-EEEEETTTCCE
T ss_pred cCCCccceEEEEEC-CCCEEEEC-CCC-eEEEcCCCcee
Confidence 111 2346777653 66655544 555 67778776553
No 362
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=67.07 E-value=10 Score=36.39 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=32.3
Q ss_pred ceEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEe
Q 021319 193 GCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTF 229 (314)
Q Consensus 193 ~i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~ 229 (314)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4667777888889999999999999999999998764
No 363
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=66.70 E-value=50 Score=26.74 Aligned_cols=144 Identities=10% Similarity=0.048 Sum_probs=75.1
Q ss_pred CCCEEEEEeCCCcEEEEEccCCeEeeee---------ccCcceeeEEeccCCCeEEEEcCCceEEEEeC---CCCC----
Q 021319 119 DGTHIAVGNRDDELTILDVRKFKPIHRR---------KFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTY---PSLR---- 182 (314)
Q Consensus 119 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~---- 182 (314)
+...+++.+.+|.|+-..+..++..... +.+-.+..+......+.+++.+..|.++.+.. +...
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 4456777888888887777654432211 11122333334445667777778888776653 2211
Q ss_pred --ceeee-e-ecccceEEE-EEC--CCCCEEEEeeCCCeEEEeeCCC-------cEEEEEeeecccCeEEEEEccCCcEE
Q 021319 183 --PLDTV-V-AHTAGCYCI-AID--PMGRYFAVGSADSLVSLWDISE-------MLCVRTFTKLEWPVRTISFSHTGDYI 248 (314)
Q Consensus 183 --~~~~~-~-~~~~~i~~i-~~~--~~~~~l~t~~~dg~i~vwd~~~-------~~~~~~~~~~~~~v~~~~~sp~~~~l 248 (314)
++..+ . .....|..+ .+. .++.+++..+.+|.++--.+.. +...-.+... ..+-.+........+
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i 160 (307)
T 1zi0_A 82 GRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEV 160 (307)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEE
T ss_pred CeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEE
Confidence 11111 1 122334444 332 3456788899999998887642 2221122222 344444444455567
Q ss_pred EEecCCceEEEEECC
Q 021319 249 ASASEDLFIDISNVH 263 (314)
Q Consensus 249 ~s~s~d~~v~v~~~~ 263 (314)
+..+.+|.+..+...
T Consensus 161 ~l~T~~G~~irf~~~ 175 (307)
T 1zi0_A 161 MLFSAEGKVVRFKES 175 (307)
T ss_dssp EEEETTSEEEEEEGG
T ss_pred EEECCCCcEEEEEHH
Confidence 778888877766653
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.14 E-value=28 Score=31.34 Aligned_cols=58 Identities=19% Similarity=0.118 Sum_probs=39.7
Q ss_pred eEEEEECCCCCEEEEeeCC------------CeEEEeeCCCcEEEEEeeec-ccCeEEEEEccCCcEEEEe
Q 021319 194 CYCIAIDPMGRYFAVGSAD------------SLVSLWDISEMLCVRTFTKL-EWPVRTISFSHTGDYIASA 251 (314)
Q Consensus 194 i~~i~~~~~~~~l~t~~~d------------g~i~vwd~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~s~ 251 (314)
+-.|+|+|.|++++.-+.+ ..+.+.+..+++..+-+... ...+..++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999976655432 24566666666544434333 4578999999999988765
No 365
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=64.49 E-value=57 Score=26.65 Aligned_cols=190 Identities=11% Similarity=0.042 Sum_probs=0.0
Q ss_pred cCCCEEEEEeCCCcEEEEEccCCeEeee----eccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCcee--------
Q 021319 118 PDGTHIAVGNRDDELTILDVRKFKPIHR----RKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRPLD-------- 185 (314)
Q Consensus 118 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------- 185 (314)
|+...+++.+.+|.|+-..+..++.... .+.+-.+..+......+.+++.+..|.+..+.........
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i 82 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI 82 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh
Q ss_pred ----eeeecccceEEEEECC--CCCEEEEeeCCCeEEEeeC--------CCcEEEEEeeecccCeEEEEEccCCcEEEEe
Q 021319 186 ----TVVAHTAGCYCIAIDP--MGRYFAVGSADSLVSLWDI--------SEMLCVRTFTKLEWPVRTISFSHTGDYIASA 251 (314)
Q Consensus 186 ----~~~~~~~~i~~i~~~~--~~~~l~t~~~dg~i~vwd~--------~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 251 (314)
.+.....-+..+.+.. ++.+++..+.+|.++--.+ ..+...-.+... ..+-.+........|+..
T Consensus 83 ~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 83 ANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEE
T ss_pred hhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEE
Q ss_pred cCCceEEEEECCC---------CCeEEEEeccCccceeEEcCCCC-eeEEEecCCcccccccceEEe
Q 021319 252 SEDLFIDISNVHT---------GRTVHQIPCRAAMNSVEWNPKYN-LLAYAGDDKNKYQADEGVFRI 308 (314)
Q Consensus 252 s~d~~v~v~~~~~---------~~~~~~~~~~~~i~~v~~~~~~~-~la~~~~d~~~~~~~~~~~~~ 308 (314)
+.+|.+..+.... |-....+.....|.++..-+.+. .|.+.+..+........++++
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~ 228 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEK 228 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCC
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccc
No 366
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=55.40 E-value=1e+02 Score=26.65 Aligned_cols=104 Identities=14% Similarity=0.183 Sum_probs=59.2
Q ss_pred ceeeEEeccCCC-eEEEEcCCceEEEEeCCCC---Cceeeee---e------cccceEEEEECCC----CCEEEEeeC--
Q 021319 151 EVNEIAWNMTGE-MFFLTTGNGTVEVLTYPSL---RPLDTVV---A------HTAGCYCIAIDPM----GRYFAVGSA-- 211 (314)
Q Consensus 151 ~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~---~~~~~~~---~------~~~~i~~i~~~~~----~~~l~t~~~-- 211 (314)
....+++.|++. .++++...|.|++++.... .++..+. . .......|+++|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 356788889986 5666777899999864321 1221111 1 1356789999996 443332221
Q ss_pred C----------CeEEEeeCCC----------cEEEEEee--ecccCeEEEEEccCCcEEEEecCC
Q 021319 212 D----------SLVSLWDISE----------MLCVRTFT--KLEWPVRTISFSHTGDYIASASED 254 (314)
Q Consensus 212 d----------g~i~vwd~~~----------~~~~~~~~--~~~~~v~~~~~sp~~~~l~s~s~d 254 (314)
+ ..|.-|.+.. .+.+..+. ........|+|.|||.+.++.+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455431 23333332 123457889999999877766543
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=55.12 E-value=25 Score=32.42 Aligned_cols=35 Identities=17% Similarity=0.525 Sum_probs=28.7
Q ss_pred eEEEEECCCCCEEEEeeCCCeEEEeeCCCcEEEEEee
Q 021319 194 CYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFT 230 (314)
Q Consensus 194 i~~i~~~~~~~~l~t~~~dg~i~vwd~~~~~~~~~~~ 230 (314)
|.++.+ +..++++-+.|.++|+|++++++++.+..
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 555555 47799999999999999999999887654
No 368
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=50.33 E-value=53 Score=21.87 Aligned_cols=9 Identities=33% Similarity=0.571 Sum_probs=4.9
Q ss_pred ccceEEecc
Q 021319 302 DEGVFRIYG 310 (314)
Q Consensus 302 ~~~~~~~~~ 310 (314)
++|.++||+
T Consensus 97 ~dGnlvly~ 105 (113)
T 3mez_B 97 INGQAVVYG 105 (113)
T ss_dssp TTSCEEEEC
T ss_pred CCceEEEec
Confidence 445555554
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=47.93 E-value=1.1e+02 Score=24.93 Aligned_cols=155 Identities=10% Similarity=0.044 Sum_probs=81.6
Q ss_pred CCEEEEEEcCC--CCCEEEEEeCCCcEEEEeCCCCce-----eeeEEe--cCceEEEEEccCCCEEEEEeCCCcEEEEEc
Q 021319 67 DSVDQLCWDPK--HADLIATASGDKTVRLWDARSGKC-----SQQAEL--SGENINITYKPDGTHIAVGNRDDELTILDV 137 (314)
Q Consensus 67 ~~v~~l~~~~~--~~~~l~s~~~D~~v~iwd~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~ 137 (314)
..|..+...++ ....++..+.+|.++.-.+..-.. .....+ ....+.+........++..+..|.+..+..
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~ 174 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSA 174 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEC
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEEC
Confidence 44555433221 246888999999999887543211 111122 233444444455567888888888877766
Q ss_pred c--CCeEee---------eeccCcceeeEEeccCCCeEEEEcCCceEEEEeCCCCCc-------eeeeee-c-ccceEEE
Q 021319 138 R--KFKPIH---------RRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYPSLRP-------LDTVVA-H-TAGCYCI 197 (314)
Q Consensus 138 ~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~-~-~~~i~~i 197 (314)
. ...+.. ....+..+..+.....+..+++.+..|.++...+..... +..+.. . ...+-.+
T Consensus 175 ~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~ 254 (327)
T 3uc1_A 175 TDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGA 254 (327)
T ss_dssp CTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEE
T ss_pred cccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEE
Confidence 5 322111 111223344444444566788888999888876543221 111111 0 2223333
Q ss_pred EECCCCCEEEEeeCCCeEEEeeCC
Q 021319 198 AIDPMGRYFAVGSADSLVSLWDIS 221 (314)
Q Consensus 198 ~~~~~~~~l~t~~~dg~i~vwd~~ 221 (314)
....+...++..+.+|.+.-++..
T Consensus 255 ~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 255 LIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEeCCCccEEEEcCCCeEEEEehh
Confidence 222234455556667766666553
No 370
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=39.47 E-value=1.3e+02 Score=26.37 Aligned_cols=68 Identities=12% Similarity=0.082 Sum_probs=43.4
Q ss_pred ceEEEEECCC----C--CEEEEeeCCCeEEEeeC-CCc-------EEEEEeee--cccCeEEEEEccCCcEEEEecCCce
Q 021319 193 GCYCIAIDPM----G--RYFAVGSADSLVSLWDI-SEM-------LCVRTFTK--LEWPVRTISFSHTGDYIASASEDLF 256 (314)
Q Consensus 193 ~i~~i~~~~~----~--~~l~t~~~dg~i~vwd~-~~~-------~~~~~~~~--~~~~v~~~~~sp~~~~l~s~s~d~~ 256 (314)
..++|+++.- + +.+..|..+|.|+=.-+ ... ..+.++.. ...+|..+.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4577776532 4 35788999996533322 221 12233332 3468999999999999999999887
Q ss_pred EEEE
Q 021319 257 IDIS 260 (314)
Q Consensus 257 v~v~ 260 (314)
++|-
T Consensus 485 ~~vp 488 (495)
T 1q47_A 485 AQLP 488 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7663
No 371
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=38.77 E-value=1.7e+02 Score=24.24 Aligned_cols=108 Identities=5% Similarity=-0.065 Sum_probs=51.0
Q ss_pred ceEEEEECCC-CCEEEEeeCCCeEEEeeCCCcEEEEEeee-cc----cCeEEEEEccC-CcEEEEecC-----------C
Q 021319 193 GCYCIAIDPM-GRYFAVGSADSLVSLWDISEMLCVRTFTK-LE----WPVRTISFSHT-GDYIASASE-----------D 254 (314)
Q Consensus 193 ~i~~i~~~~~-~~~l~t~~~dg~i~vwd~~~~~~~~~~~~-~~----~~v~~~~~sp~-~~~l~s~s~-----------d 254 (314)
.+.+++++|+ ...+..+...+ |...+- .++.-+.+.. .. ..+..++++|. ...|..+.. +
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~ 310 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPG 310 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCC
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCC
Confidence 4789999986 34555565554 444332 2222222211 11 23467888763 333333321 3
Q ss_pred ceEEEEECCC-CCeEEEEe----ccC---c--cceeEEcCCC-CeeEEEecCCcccccc
Q 021319 255 LFIDISNVHT-GRTVHQIP----CRA---A--MNSVEWNPKY-NLLAYAGDDKNKYQAD 302 (314)
Q Consensus 255 ~~v~v~~~~~-~~~~~~~~----~~~---~--i~~v~~~~~~-~~la~~~~d~~~~~~~ 302 (314)
+...++.... |+.-..+. ... . ...++++|.. ..|..++.++.+|...
T Consensus 311 ~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~ 369 (394)
T 3b7f_A 311 GKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA 369 (394)
T ss_dssp SSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES
T ss_pred CceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC
Confidence 3334444333 33333332 111 1 2368898853 4455565556566533
No 372
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=37.60 E-value=2.6e+02 Score=26.09 Aligned_cols=54 Identities=9% Similarity=-0.009 Sum_probs=31.8
Q ss_pred ccceEEEEECCCC-CEEEEeeCCCeEEEeeCCCcEEEEEeee-------cccCeEEEEEccCC
Q 021319 191 TAGCYCIAIDPMG-RYFAVGSADSLVSLWDISEMLCVRTFTK-------LEWPVRTISFSHTG 245 (314)
Q Consensus 191 ~~~i~~i~~~~~~-~~l~t~~~dg~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~sp~~ 245 (314)
.+.|.+|+++|.. ..+..+...+.|...+- .++.-+.+.. ....+.+|+++|..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~ 75 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNN 75 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCC
Confidence 3578999999863 44555666666655542 2322222222 12368999999853
No 373
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=35.18 E-value=1.3e+02 Score=26.72 Aligned_cols=68 Identities=13% Similarity=0.097 Sum_probs=43.9
Q ss_pred ceEEEEECCCC--CEEEEeeCCCeEEEeeCCCc----EEEEEeeec--ccCeE-EEEEccCCcEEEEecCCceEEEE
Q 021319 193 GCYCIAIDPMG--RYFAVGSADSLVSLWDISEM----LCVRTFTKL--EWPVR-TISFSHTGDYIASASEDLFIDIS 260 (314)
Q Consensus 193 ~i~~i~~~~~~--~~l~t~~~dg~i~vwd~~~~----~~~~~~~~~--~~~v~-~~~~sp~~~~l~s~s~d~~v~v~ 260 (314)
..++++....+ +.+..|..+|.|+=.-+... ..+..+... ..+|. .+.++++..+|..++.++.++|-
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kvp 477 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVP 477 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccceee
Confidence 35666665433 46788999997654444321 223333222 35775 89999999999999998777664
No 374
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=31.61 E-value=1.1e+02 Score=19.99 Aligned_cols=12 Identities=8% Similarity=-0.083 Sum_probs=6.5
Q ss_pred ecCCceEEEEEC
Q 021319 251 ASEDLFIDISNV 262 (314)
Q Consensus 251 ~s~d~~v~v~~~ 262 (314)
-..||.+.++|.
T Consensus 57 l~~dGnLvL~d~ 68 (105)
T 4h3o_A 57 LQSDGNFVVYDS 68 (105)
T ss_dssp ECTTSCEEEECT
T ss_pred EeCCccEEEECC
Confidence 345666655553
No 375
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=29.46 E-value=2e+02 Score=22.40 Aligned_cols=145 Identities=7% Similarity=-0.055 Sum_probs=70.9
Q ss_pred eEEEEcCCceEEEEeCCCCCce-eeeeecccceEEEEECCCCCEEEEeeCCCeEEEe---eCCC----cEEEE---Eeee
Q 021319 163 MFFLTTGNGTVEVLTYPSLRPL-DTVVAHTAGCYCIAIDPMGRYFAVGSADSLVSLW---DISE----MLCVR---TFTK 231 (314)
Q Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~l~t~~~dg~i~vw---d~~~----~~~~~---~~~~ 231 (314)
..++.+.+|.++.......... ..+. ....+..+....+...++..+..|.+.-. ++.. +..+. .+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lk-e~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~- 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYK-AGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP- 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCC-TTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-
Confidence 3455667777766554332110 0111 11223333222234455556677765444 4422 22110 111
Q ss_pred cccCeEEEEEccCCcEEEEecCCceEEEEECCC-------CCeEEEEeccCccceeEEc-CCCCeeEEEecCCccccccc
Q 021319 232 LEWPVRTISFSHTGDYIASASEDLFIDISNVHT-------GRTVHQIPCRAAMNSVEWN-PKYNLLAYAGDDKNKYQADE 303 (314)
Q Consensus 232 ~~~~v~~~~~sp~~~~l~s~s~d~~v~v~~~~~-------~~~~~~~~~~~~i~~v~~~-~~~~~la~~~~d~~~~~~~~ 303 (314)
....|.++....++.+|+.++..|.++...... |+....+.-.+.+..+... .....++..+.++....+..
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 123455553334567788999999998887632 2222233333456666655 23445666776665555555
Q ss_pred ceEEec
Q 021319 304 GVFRIY 309 (314)
Q Consensus 304 ~~~~~~ 309 (314)
.++++.
T Consensus 162 ~ei~~~ 167 (256)
T 1zvt_A 162 SDLPQL 167 (256)
T ss_dssp GGSCBC
T ss_pred HHCCCc
Confidence 444443
No 376
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=28.20 E-value=3.2e+02 Score=24.36 Aligned_cols=68 Identities=12% Similarity=0.131 Sum_probs=45.0
Q ss_pred ceEEEEECC----C--CCEEEEeeCCCeEE-EeeCC-------CcEEEEEeeec-----------ccCeEEEEEccCCcE
Q 021319 193 GCYCIAIDP----M--GRYFAVGSADSLVS-LWDIS-------EMLCVRTFTKL-----------EWPVRTISFSHTGDY 247 (314)
Q Consensus 193 ~i~~i~~~~----~--~~~l~t~~~dg~i~-vwd~~-------~~~~~~~~~~~-----------~~~v~~~~~sp~~~~ 247 (314)
..+.|+++. + -..+..|+.+|.|+ +.... ....+.++... ..+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 357777764 2 24678999999864 43321 11233333221 357889999999999
Q ss_pred EEEecCCceEEEE
Q 021319 248 IASASEDLFIDIS 260 (314)
Q Consensus 248 l~s~s~d~~v~v~ 260 (314)
|..++.++.++|-
T Consensus 484 LYV~s~~~V~qVP 496 (565)
T 3oky_B 484 LYVAFSTCVIKVP 496 (565)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEEEecCeEEEee
Confidence 9999999888776
No 377
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=27.48 E-value=3.8e+02 Score=24.94 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=36.3
Q ss_pred CCCEEEEEEcCCCCCEEEEEeCCCcEEEEeCCCCceeeeEEe--------cCceEEEEEccC-CCEEEEEe
Q 021319 66 ADSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAEL--------SGENINITYKPD-GTHIAVGN 127 (314)
Q Consensus 66 ~~~v~~l~~~~~~~~~l~s~~~D~~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~l~~~~ 127 (314)
...|.+++++|.+.+.++.+...+.|...+= .|+--..... ......+++.|. ...++++.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDA-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEET-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecC-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 4579999999987777777887777766552 2322111111 123567788774 34454443
No 378
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=25.03 E-value=4.1e+02 Score=24.47 Aligned_cols=235 Identities=11% Similarity=0.107 Sum_probs=111.3
Q ss_pred EEEEE-ECCCCCEEEEe----e-CCCcEEEeecCCCCCCceeeEEee-cCCC------CEEEEEEcCCCCCEEEEE----
Q 021319 23 VHSVA-WNCTGTKLASG----S-VDQTARVWHIEPHGHGKVKDIELR-GHAD------SVDQLCWDPKHADLIATA---- 85 (314)
Q Consensus 23 V~~v~-~s~~g~~l~s~----~-~D~~v~iw~~~~~~~~~~~~~~~~-~h~~------~v~~l~~~~~~~~~l~s~---- 85 (314)
...+. ++|++++++-+ | .-..+|++|++++.. ..-.+. .-+. ....++|... ..++++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~---~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~ 206 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDF---VKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHK 206 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEE---CTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCST
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCc---CCCCcccccccccccccccceeeEECC-CEEEEEeCCCC
Confidence 44444 89999875553 2 233789999976421 000011 0000 0123366533 3344432
Q ss_pred ------eCCCcEEEEeCCCCceeee--EEe--cCceEEEEEccCCCE-----EEEEeCC---CcEEEEEccCCe-Eeeee
Q 021319 86 ------SGDKTVRLWDARSGKCSQQ--AEL--SGENINITYKPDGTH-----IAVGNRD---DELTILDVRKFK-PIHRR 146 (314)
Q Consensus 86 ------~~D~~v~iwd~~~~~~~~~--~~~--~~~~~~~~~~~~~~~-----l~~~~~d---~~i~i~d~~~~~-~~~~~ 146 (314)
+....|+.|-+.+...... +.. ..-.+....++++++ ++..+.+ ..+.+.|..... ....+
T Consensus 207 ~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (711)
T 4hvt_A 207 NEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKI 286 (711)
T ss_dssp TCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEEC
T ss_pred CCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEe
Confidence 1125678887655432211 111 122344556666662 3333312 335555654311 12222
Q ss_pred ccCcceeeEEeccCCCeEEEE----------cCCceEEEEeCCCC-------Cceeeeeec--ccceEEEEECCCCCEEE
Q 021319 147 KFGYEVNEIAWNMTGEMFFLT----------TGNGTVEVLTYPSL-------RPLDTVVAH--TAGCYCIAIDPMGRYFA 207 (314)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~----------~~~g~~~~~~~~~~-------~~~~~~~~~--~~~i~~i~~~~~~~~l~ 207 (314)
..+... .+..+..+..++.. ...+.+...++... .....+..+ ...+..+.+..+ .+++
T Consensus 287 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 287 NMPSDA-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp CSCTTC-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEE
T ss_pred ecCCcc-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEE
Confidence 222221 22344455444432 13566777776542 112222222 234677888865 5666
Q ss_pred EeeCCC--eEEEeeCCCcE-EEEE-eeec-ccCeEEEEEccCCc-EEEEecCC---ceEEEEECC
Q 021319 208 VGSADS--LVSLWDISEML-CVRT-FTKL-EWPVRTISFSHTGD-YIASASED---LFIDISNVH 263 (314)
Q Consensus 208 t~~~dg--~i~vwd~~~~~-~~~~-~~~~-~~~v~~~~~sp~~~-~l~s~s~d---~~v~v~~~~ 263 (314)
+...++ .+.++|+.++. .... +... ...+...+.++++. ++++.+.. ..+..+|..
T Consensus 365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 777776 46777765553 1222 2211 23466666777765 44444432 567777765
No 379
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=24.93 E-value=3e+02 Score=22.89 Aligned_cols=144 Identities=10% Similarity=0.024 Sum_probs=80.1
Q ss_pred cCCCEEEEEeCCCcEEEEEccCCeEe---------eeeccCcceeeEEeccCCCeEEEEcCCceEEEEeCC---CC----
Q 021319 118 PDGTHIAVGNRDDELTILDVRKFKPI---------HRRKFGYEVNEIAWNMTGEMFFLTTGNGTVEVLTYP---SL---- 181 (314)
Q Consensus 118 ~~~~~l~~~~~d~~i~i~d~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~---- 181 (314)
|+...+++.+.+|.|+-..+..++.. ...+.+-.+..+........+++.+..|.++.+... ..
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a 84 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNA 84 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCccc
Confidence 56677888888998888766443211 112222234444444556667777888887776532 21
Q ss_pred --Cceeee-e-ecccceEEE-EEC--CCCCEEEEeeCCCeEEEeeCCCc-------EEEEEeeecccCeEEEEEccCCcE
Q 021319 182 --RPLDTV-V-AHTAGCYCI-AID--PMGRYFAVGSADSLVSLWDISEM-------LCVRTFTKLEWPVRTISFSHTGDY 247 (314)
Q Consensus 182 --~~~~~~-~-~~~~~i~~i-~~~--~~~~~l~t~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~sp~~~~ 247 (314)
.++..+ . .....|.++ .+. .++.+++.++.+|.++--.+... ...-.+.. ...+-.+........
T Consensus 85 ~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~ 163 (370)
T 3l6v_A 85 RGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRD 163 (370)
T ss_dssp CCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCE
T ss_pred CCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCce
Confidence 111111 1 112334443 343 24568999999999998876433 22112222 234444444455566
Q ss_pred EEEecCCceEEEEEC
Q 021319 248 IASASEDLFIDISNV 262 (314)
Q Consensus 248 l~s~s~d~~v~v~~~ 262 (314)
|+..+.+|.+..+..
T Consensus 164 i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 164 VLLFASNGKTVRFGE 178 (370)
T ss_dssp EEEEETTSEEEEEEG
T ss_pred EEEEeCCCeEEEEEc
Confidence 777888887766664
No 380
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=22.73 E-value=4.4e+02 Score=24.04 Aligned_cols=66 Identities=14% Similarity=0.127 Sum_probs=42.6
Q ss_pred eEEEEEC----CCC---CEEEEeeCCCeE-EEeeCCCc-EEEEEeee--cccCeEEEEEccCC--cEEEEecCCceEEE
Q 021319 194 CYCIAID----PMG---RYFAVGSADSLV-SLWDISEM-LCVRTFTK--LEWPVRTISFSHTG--DYIASASEDLFIDI 259 (314)
Q Consensus 194 i~~i~~~----~~~---~~l~t~~~dg~i-~vwd~~~~-~~~~~~~~--~~~~v~~~~~sp~~--~~l~s~s~d~~v~v 259 (314)
.+.|+++ .++ +.+..|..+|.| ++-..... ..+..+.. ...+|..+.++++. .+|..++..+.++|
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 5677763 333 368899999975 33333332 23333322 34688899999988 99998888876655
No 381
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=21.86 E-value=1.8e+02 Score=19.12 Aligned_cols=17 Identities=18% Similarity=0.026 Sum_probs=9.7
Q ss_pred CEEEEeeCCCeEEEeeC
Q 021319 204 RYFAVGSADSLVSLWDI 220 (314)
Q Consensus 204 ~~l~t~~~dg~i~vwd~ 220 (314)
++.+.=..||.+.+++.
T Consensus 25 ~~~L~~q~dGnLvl~~~ 41 (110)
T 3r0e_B 25 NHQLVMQGDCNLVLYGG 41 (110)
T ss_dssp SCEEEECTTSCEEEECS
T ss_pred CEEEEEcCCCeEEEECC
Confidence 34334456777777654
No 382
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.06 E-value=1.8e+02 Score=19.05 Aligned_cols=20 Identities=15% Similarity=0.067 Sum_probs=13.5
Q ss_pred CCCEEEEeeCCCeEEEeeCC
Q 021319 202 MGRYFAVGSADSLVSLWDIS 221 (314)
Q Consensus 202 ~~~~l~t~~~dg~i~vwd~~ 221 (314)
++++.+.=..||.+.+++..
T Consensus 19 ~g~~~L~~q~dGnLvl~~~~ 38 (111)
T 3mez_A 19 YESAAFVMQGDCNLVLYNEA 38 (111)
T ss_dssp ETTEEEEECTTSCEEEECSS
T ss_pred cCCEEEEEccCCeEEEECCC
Confidence 46666666678888887753
No 383
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=20.18 E-value=5e+02 Score=23.72 Aligned_cols=67 Identities=12% Similarity=0.149 Sum_probs=42.9
Q ss_pred eEEEEEC----CCC--CEEEEeeCCCeEE-EeeCCCc-------EEEEEee--ecccCeEEEEEccCCcEEEEecCCceE
Q 021319 194 CYCIAID----PMG--RYFAVGSADSLVS-LWDISEM-------LCVRTFT--KLEWPVRTISFSHTGDYIASASEDLFI 257 (314)
Q Consensus 194 i~~i~~~----~~~--~~l~t~~~dg~i~-vwd~~~~-------~~~~~~~--~~~~~v~~~~~sp~~~~l~s~s~d~~v 257 (314)
.+.|+++ +++ +.+..|..+|.|+ +.-.... ..+..+. ....+|..+.++++..+|..++.++.+
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~ 493 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 493 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEE
Confidence 4556653 344 3577899999754 3322111 1222222 245678999999999999999999877
Q ss_pred EEE
Q 021319 258 DIS 260 (314)
Q Consensus 258 ~v~ 260 (314)
+|-
T Consensus 494 kVP 496 (667)
T 4gz8_A 494 QLP 496 (667)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
Done!