BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021320
(314 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GW19|FACE2_ARATH CAAX prenyl protease 2 OS=Arabidopsis thaliana GN=FACE2 PE=2 SV=2
Length = 311
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/314 (62%), Positives = 237/314 (75%), Gaps = 3/314 (0%)
Query: 1 MEQETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSI 60
M + E+ +S + A+ CV M L YV ILY PT+ILRLP +S ++IRRFICAAI ++
Sbjct: 1 MATDGES-ISMSLAVATCVAMALFYVLILYVPTVILRLPSASSYTEFMIRRFICAAICTV 59
Query: 61 ISLIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNS 120
SL+F+A ILPI+SWE S +LGVYGIR DH+WQ V+PL LTSL+YAGS+VLK LL S
Sbjct: 60 ASLVFTAFILPIKSWEASYILGVYGIRKDHLWQGVVYPLLLTSLVYAGSLVLKLFTLLES 119
Query: 121 WTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACMIPLLL 180
W N G S I+ ++ A + ASN+ WRNF+VAP+TEELVFR+CMIPLLL
Sbjct: 120 WKE--NGGGCSSFNYIRSFFQTIPASVLTSASNVSVWRNFIVAPVTEELVFRSCMIPLLL 177
Query: 181 CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFL 240
C GF+INT IFLCPV FSLAHLNH E+Y N S L+AS+IVGLQLGYTV+FG YASFL
Sbjct: 178 CAGFRINTAIFLCPVLFSLAHLNHFREMYIRHNRSYLRASLIVGLQLGYTVIFGAYASFL 237
Query: 241 FIRTGHLAAPLIAHIFCNYMGLPVLFARNRGLVSVAFVAGMVAFLWLLFPITRPDLYNDR 300
FIRTGHLAAPL AHIFCNYMGLPVL+A +GLVS AF+ G+V F+ LLFP+T+P +YND
Sbjct: 238 FIRTGHLAAPLFAHIFCNYMGLPVLYANGKGLVSAAFLGGVVGFVLLLFPLTKPLMYNDS 297
Query: 301 TNNCRCLHGYCSWN 314
TN+C C GYC WN
Sbjct: 298 TNDCPCWLGYCLWN 311
>sp|Q9U1H8|FACE2_DROME CAAX prenyl protease 2 OS=Drosophila melanogaster GN=Sras PE=2 SV=3
Length = 302
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 154/314 (49%), Gaps = 53/314 (16%)
Query: 3 QETEAYVSKAAALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIIS 62
E+ + A ++ C ++ + YVG LY + P ++K RRF ++ + +
Sbjct: 19 HESLPQIPVATSVSCCFVLAVLYVGSLYIWSTKHNRDHPTTVK----RRFASVSMVMLAA 74
Query: 63 LIFSALILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVL-------KSL 115
F + G+R + +WQA V P LT L++ G + + +S
Sbjct: 75 PFFVYFFSSPELLSRVPFPKLLGLRLEGLWQAVVIPYSLTVLLFLGPIFVNMQNESVRSY 134
Query: 116 LLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAWRNFVVAPLTEELVFRACM 175
L+ W G ++W RN V+APL+EE VFRACM
Sbjct: 135 FDLDYWR-----------GSFGSIIWV---------------RNHVIAPLSEEFVFRACM 168
Query: 176 IPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSL---LKASMIVGL-QLGYTV 231
+PL+L F +F+ P+FF +AHL+H+ A+ SL L ++++GL Q YT
Sbjct: 169 MPLIL-QSFSPLVAVFITPLFFGVAHLHHI-----AERLSLGVELSTALLIGLFQFIYTT 222
Query: 232 VFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFAR------NRGLVSVAFVAGMVAFL 285
+FG+Y++FLF RTGH+ AP++ H FCN+MGLP L R + + ++AG V ++
Sbjct: 223 LFGFYSAFLFARTGHVMAPILVHAFCNHMGLPDLQDLWQQDLWRRVVAIILYLAGFVGWM 282
Query: 286 WLLFPITRPDLYND 299
+L+ T P +Y++
Sbjct: 283 FLVPLATDPSIYDN 296
>sp|Q9Y256|FACE2_HUMAN CAAX prenyl protease 2 OS=Homo sapiens GN=RCE1 PE=1 SV=1
Length = 329
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 140/258 (54%), Gaps = 25/258 (9%)
Query: 14 ALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSAL--ILP 71
++ +C+ + SYVG LY L PA +K + +++S + L++ L I P
Sbjct: 38 SVFSCLSLACSYVGSLYVWKSELPRDHPAVIKRRFTSVLVVSSLSPLCVLLWRELTGIQP 97
Query: 72 IRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGL 131
+++L + G R + ++ AA+ PL LT +++ G ++ S+ D+ +
Sbjct: 98 -----GTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDLADG--- 145
Query: 132 SLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTI 189
+K+VL + +A + W RN V+APLTEELVFRACM+P+L C G +
Sbjct: 146 ----LKVVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCMG--LGPA 196
Query: 190 IFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAA 249
+F CP+FF +AH +H++E + S+ + Q YT VFG Y +FLFIRTGHL
Sbjct: 197 VFTCPLFFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIG 256
Query: 250 PLIAHIFCNYMGLPVLFA 267
P++ H FCNYMG P + A
Sbjct: 257 PVLCHSFCNYMGFPAVCA 274
>sp|P57791|FACE2_MOUSE CAAX prenyl protease 2 OS=Mus musculus GN=Rce1 PE=2 SV=1
Length = 329
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 139/258 (53%), Gaps = 25/258 (9%)
Query: 14 ALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSAL--ILP 71
++ +C + SYVG LY L PA +K + +++S + L++ L I P
Sbjct: 38 SVFSCFSLACSYVGSLYVWKSELPRDHPAVIKRRSTSVLVVSSLSPLCVLLWRELTGIQP 97
Query: 72 IRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGL 131
+++L + G R + ++ AA+ PL LT +++ G ++ S+ D+ +
Sbjct: 98 -----GTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDLTDG--- 145
Query: 132 SLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTI 189
+K+VL + +A + W RN V+APLTEELVFRACM+P+L C G +
Sbjct: 146 ----LKVVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPA 196
Query: 190 IFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAA 249
+F CP+FF +AH +H++E + S+ + Q YT VFG Y +FLFIRTGHL
Sbjct: 197 VFTCPLFFGVAHFHHIIEQLRFRQSSVGSIFVSAAFQFSYTAVFGAYTAFLFIRTGHLIG 256
Query: 250 PLIAHIFCNYMGLPVLFA 267
P++ H FCNYMG P + A
Sbjct: 257 PVLCHSFCNYMGFPAVCA 274
>sp|O94448|RCE1_SCHPO Probable CAAX prenyl protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1687.02 PE=3 SV=1
Length = 271
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Query: 152 SNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSA 211
SN +AWRN ++ PL+EEL FR C++P+ G+ IIF+ P+ F +AH++H E A
Sbjct: 111 SNAIAWRNIIIGPLSEELTFRCCIVPICEAAGWSRLKIIFVAPLLFGMAHIHHTYEFLLA 170
Query: 212 QNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFAR--N 269
+ + A++ +Q YT VFGWY + LF+ T L + H FCN MGLP L+ + N
Sbjct: 171 YPNAYIAAALQTVVQFSYTTVFGWYTTHLFLSTHSLFPSFLVHAFCNSMGLPTLYGKIGN 230
Query: 270 RGLVSVAF 277
R + +
Sbjct: 231 RNQTRIYY 238
>sp|A6H7A0|FACE2_BOVIN CAAX prenyl protease 2 OS=Bos taurus GN=RCE1 PE=2 SV=1
Length = 308
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 46/258 (17%)
Query: 14 ALMACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICAAISSIISLIFSAL--ILP 71
++ +C+ + SYVG LY L PA +K + +++S + L++ L I P
Sbjct: 38 SVFSCLSLACSYVGSLYVWKSELPRDHPAVIKRRFTSVLVVSSLSPLCVLLWRELTGIQP 97
Query: 72 IRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLKSLLLLNSWTTDMNNSGGL 131
+++L + G R + ++ AA+ PL LT +++ G ++ S+ D+ +
Sbjct: 98 -----GTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSM----DCPCDLADG--- 145
Query: 132 SLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFRACMIPLLL-CGGFKINTI 189
+K+VL + +A + W RN V+APLTEELVFRACM+P+L C G +
Sbjct: 146 ----LKVVL---APRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTG--LGPA 196
Query: 190 IFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAA 249
+F CP+FF +AH +H+ E + S+ +F+ GHL
Sbjct: 197 VFTCPLFFGVAHFHHIFEQLRFRQSSV---------------------GSIFLSAGHLIG 235
Query: 250 PLIAHIFCNYMGLPVLFA 267
P++ H FCNYMG P + A
Sbjct: 236 PVLCHSFCNYMGFPAVCA 253
>sp|B0BMW8|FACE2_RAT CAAX prenyl protease 2 OS=Rattus norvegicus GN=Rce1 PE=2 SV=1
Length = 308
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 130/276 (47%), Gaps = 52/276 (18%)
Query: 2 EQETEAYVSKAAAL------MACVLMTLSYVGILYAPTLILRLPPPASLKHYLIRRFICA 55
+ E+ A S L +C + SYVG LY L PA +K + +
Sbjct: 20 QPESAALSSPGPGLCCWVSVFSCFSLACSYVGSLYVWKSELPRDHPAVIKRRFTSVLVVS 79
Query: 56 AISSIISLIFSAL--ILPIRSWETSNVLGVYGIRADHMWQAAVFPLFLTSLMYAGSMVLK 113
++S + L++ L I P +++L + G R + ++ AA+ PL LT +++ G +
Sbjct: 80 SLSPLCVLLWRELTGIQP-----GTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPL--- 131
Query: 114 SLLLLNSWTTDMNNSGGLSLGCIKIVLWSLRAQMFAVASNILAW-RNFVVAPLTEELVFR 172
+ L D+ + +K+VL + +A + W RN V+APLTEELVFR
Sbjct: 132 -MQLCMDCPCDLTDG-------LKVVL---APRSWARRLTDMRWLRNQVIAPLTEELVFR 180
Query: 173 ACMIPLLL-CGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNFSLLKASMIVGLQLGYTV 231
ACM+P+L C G + +F CP+FF +AH +H++E + S+
Sbjct: 181 ACMLPMLAPCTG--LGPAVFTCPLFFGVAHFHHIIEQLRFRQSSV--------------- 223
Query: 232 VFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA 267
+F+ GHL P++ H FCNYMG P + A
Sbjct: 224 ------GSIFLSAGHLIGPVLCHSFCNYMGFPAVCA 253
>sp|Q03530|RCE1_YEAST CAAX prenyl protease 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RCE1 PE=1 SV=1
Length = 315
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 153 NILAWRNFVVAPLTEELVFRACMIP----LLLCGGFKINTIIFLCPVFFSLAHLNHLMEI 208
NI ++RNF+ AP+TEE+ + + ++ L+ + + +FF LAH +H E
Sbjct: 142 NIWSFRNFIFAPITEEIFYTSMLLTTYLNLIPHSQLSYQQLFWQPSLFFGLAHAHHAYEQ 201
Query: 209 YSAQNFSLLKASMIVGLQLGYTVVFGWYASFLFIRT-GHLAAPLIAHIFCNYMGLPVLFA 267
+ + + + Q+ YT +FG F+F+RT G+L +I H CN MG P
Sbjct: 202 LQEGSMTTVSILLTTCFQILYTTLFGGLTKFVFVRTGGNLWCCIILHALCNIMGFPGPSR 261
Query: 268 RNRGLVSVAFVAGMVAFL 285
N V AG ++ L
Sbjct: 262 LNLHFTVVDKKAGRISKL 279
>sp|Q7LL00|YQJC_SCHPO Uncharacterized oligopeptide transporter C1840.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1840.12 PE=3 SV=2
Length = 791
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 25/202 (12%)
Query: 101 LTSLMYAGSMVLKSLLLLNSWTTD----MNNS----GGLSLGCIKIV--LWSLRAQMFAV 150
TS ++ +VL L N W M NS G S K+V W L Q +
Sbjct: 352 FTSFVFWIWIVLPGLYYQNYWQVAHFPIMTNSIYTVSGKSYDAQKVVDSKWELVTQKYQE 411
Query: 151 ASNILAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVF-FSLAHLNHLMEIY 209
S ++ F++ F + MI L F + I +C VF +S H L++ Y
Sbjct: 412 YSPVMLPIAFIINIALSLGAFSSMMISFFL--RFPTDVIQPICHVFKYSDIH-TKLLKKY 468
Query: 210 SAQNFSLLKASMIVGLQLGYTVVFGWYA----SFLFIRTGHLAAPLIAHIFCNYMGLPVL 265
++ AS+IV L LG+ GW+ S+ F+ + + A L Y+ L ++
Sbjct: 469 KRVHWGFYLASIIVSLGLGFAFTEGWHDIQIRSYGFVVSMVIGAAL-------YIPLSLI 521
Query: 266 FARNRGLVSVAFVAGMVAFLWL 287
+R+ +S+ +VA W
Sbjct: 522 ESRSSFTISMQAFFEIVAAFWF 543
>sp|Q9SKJ5|CESAA_ARATH Probable cellulose synthase A catalytic subunit 10 [UDP-forming]
OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1
Length = 1065
Score = 33.9 bits (76), Expect = 1.8, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 155 LAWRNFVVAPLTEELVFRACMIPLLLCGGFKINTIIFLCPVFFSLAHLNHLMEIYSAQNF 214
+A+ N +V P+T + CM+P F + T F+ P +LA L ++ F
Sbjct: 838 IAYINTIVYPITSIPLLAYCMLP-----AFCLITNTFIIPEISNLASLCFMLL------F 886
Query: 215 SLLKASMIVGLQLGYTVVFGWYASFLFIRTGHLAAPLIAHIFCNYMGLPVLFA 267
+ + AS I+ L+ + W+ + F G + AH+F + GL +FA
Sbjct: 887 ASIYASAILELKWSDVALEDWWRNEQFWVIGGTS----AHLFAVFQGLLKVFA 935
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.141 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,687,878
Number of Sequences: 539616
Number of extensions: 4076313
Number of successful extensions: 11020
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 10973
Number of HSP's gapped (non-prelim): 43
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 61 (28.1 bits)