Query 021320
Match_columns 314
No_of_seqs 244 out of 1158
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 15:57:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021320.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021320hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j5ha1 g.3.11.7 (A:1-39) Crip 38.4 4.3 0.00032 24.9 0.7 12 299-310 15-26 (39)
2 d1dx5i2 g.3.11.1 (I:388-422) T 32.6 6.7 0.00049 23.3 0.8 13 298-310 14-26 (35)
3 d1lu0a_ g.3.2.1 (A:) Trypsin i 12.9 36 0.0026 19.2 1.1 14 299-312 15-29 (29)
4 d1wt8a1 g.3.7.2 (A:1-31) Bmkx 11.4 27 0.002 19.6 0.2 8 305-312 21-28 (31)
5 d1pw4a_ f.38.1.1 (A:) Glycerol 8.3 4.6E+02 0.033 20.7 9.0 9 81-89 51-59 (447)
6 d1dq7a_ g.3.7.1 (A:) Scorpion 6.9 56 0.0041 21.8 0.4 12 296-307 4-17 (64)
7 d1qjla_ g.46.1.1 (A:) Metallot 6.6 76 0.0056 17.2 0.8 9 303-311 18-26 (28)
8 d2c4ba2 g.3.2.1 (A:117-144) Tr 4.9 1.6E+02 0.012 15.9 1.5 15 298-312 12-27 (28)
9 d1mcvi_ g.3.2.1 (I:) Trypsin i 4.9 1.3E+02 0.0097 16.3 1.1 14 299-312 14-28 (28)
10 d1k36a_ g.3.11.1 (A:) Epiregul 4.9 82 0.006 19.3 0.3 8 303-310 29-36 (46)
No 1
>d2j5ha1 g.3.11.7 (A:1-39) Cripto growth factor {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.40 E-value=4.3 Score=24.87 Aligned_cols=12 Identities=42% Similarity=1.068 Sum_probs=9.1
Q ss_pred CCCCCccccccc
Q 021320 299 DRTNNCRCLHGY 310 (314)
Q Consensus 299 ~~~~~~~~~~~~ 310 (314)
..-..|+||+|-
T Consensus 15 k~CslCrC~~G~ 26 (39)
T d2j5ha1 15 KKCSLCRCWHGQ 26 (39)
T ss_dssp CCCCCCCCCSSS
T ss_pred ccceEEEeccCc
Confidence 445789999984
No 2
>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.60 E-value=6.7 Score=23.33 Aligned_cols=13 Identities=31% Similarity=0.963 Sum_probs=11.2
Q ss_pred cCCCCCccccccc
Q 021320 298 NDRTNNCRCLHGY 310 (314)
Q Consensus 298 ~~~~~~~~~~~~~ 310 (314)
.|..+.|+|..||
T Consensus 14 P~~p~~C~CPeGy 26 (35)
T d1dx5i2 14 PNTQASCECPEGY 26 (35)
T ss_dssp TTSTTCEECCTTE
T ss_pred CCCCCcccCCCce
Confidence 3778999999998
No 3
>d1lu0a_ g.3.2.1 (A:) Trypsin inhibitor {Squash (Cucurbita maxima) [TaxId: 3661]}
Probab=12.90 E-value=36 Score=19.20 Aligned_cols=14 Identities=57% Similarity=1.405 Sum_probs=9.8
Q ss_pred CCCCCcccc-ccccc
Q 021320 299 DRTNNCRCL-HGYCS 312 (314)
Q Consensus 299 ~~~~~~~~~-~~~~~ 312 (314)
+-+..|-|. ||||+
T Consensus 15 DCla~CvC~~~G~CG 29 (29)
T d1lu0a_ 15 DCLAECVCLEHGYCG 29 (29)
T ss_dssp GSCTTCCBCTTSBBC
T ss_pred cchhhceecccccCC
Confidence 446677774 78985
No 4
>d1wt8a1 g.3.7.2 (A:1-31) Bmkx {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=11.37 E-value=27 Score=19.61 Aligned_cols=8 Identities=50% Similarity=1.518 Sum_probs=6.9
Q ss_pred cccccccc
Q 021320 305 RCLHGYCS 312 (314)
Q Consensus 305 ~~~~~~~~ 312 (314)
||..|||.
T Consensus 21 sckngycq 28 (31)
T d1wt8a1 21 SCKNGYCQ 28 (31)
T ss_dssp CCCSEECT
T ss_pred eecCcccc
Confidence 89999995
No 5
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=8.34 E-value=4.6e+02 Score=20.72 Aligned_cols=9 Identities=22% Similarity=0.150 Sum_probs=4.8
Q ss_pred hhccccccc
Q 021320 81 LGVYGIRAD 89 (314)
Q Consensus 81 l~~lGi~~~ 89 (314)
+..+|+...
T Consensus 51 ~~~~g~s~~ 59 (447)
T d1pw4a_ 51 LVEQGFSRG 59 (447)
T ss_dssp TTSSTTCSS
T ss_pred HHHhCcCHH
Confidence 344566554
No 6
>d1dq7a_ g.3.7.1 (A:) Scorpion toxin {Indian red scorpion (Buthus tamulus), neurotoxin [TaxId: 34647]}
Probab=6.87 E-value=56 Score=21.83 Aligned_cols=12 Identities=33% Similarity=0.672 Sum_probs=8.2
Q ss_pred cccCCCCCc--ccc
Q 021320 296 LYNDRTNNC--RCL 307 (314)
Q Consensus 296 ~y~~~~~~~--~~~ 307 (314)
=|-...+|| +|+
T Consensus 4 GYiad~~nC~y~C~ 17 (64)
T d1dq7a_ 4 GYIADGDNCTYICT 17 (64)
T ss_dssp ECBBCTTSCBCBCS
T ss_pred cceeCCCCCEEECC
Confidence 355667788 776
No 7
>d1qjla_ g.46.1.1 (A:) Metallothionein {Purple sea urchin (Strongylocentrotus purpuratus) [TaxId: 7668]}
Probab=6.64 E-value=76 Score=17.25 Aligned_cols=9 Identities=44% Similarity=1.442 Sum_probs=5.1
Q ss_pred Ccccccccc
Q 021320 303 NCRCLHGYC 311 (314)
Q Consensus 303 ~~~~~~~~~ 311 (314)
+|||-.|-|
T Consensus 18 gcsctegnc 26 (28)
T d1qjla_ 18 GCSCTEGNC 26 (28)
T ss_dssp CCCCBTTBC
T ss_pred CccccCCcc
Confidence 455655555
No 8
>d2c4ba2 g.3.2.1 (A:117-144) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=4.95 E-value=1.6e+02 Score=15.86 Aligned_cols=15 Identities=33% Similarity=0.968 Sum_probs=10.4
Q ss_pred cCCCCCcccc-ccccc
Q 021320 298 NDRTNNCRCL-HGYCS 312 (314)
Q Consensus 298 ~~~~~~~~~~-~~~~~ 312 (314)
.+-+.+|-|. .|||+
T Consensus 12 sdclagcvcgpngfcg 27 (28)
T d2c4ba2 12 SDCLAGCVCGPNGFCG 27 (28)
T ss_dssp GGSCTTCEECTTSBEE
T ss_pred ccccccceecCCCcCC
Confidence 3567788774 68885
No 9
>d1mcvi_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=4.87 E-value=1.3e+02 Score=16.28 Aligned_cols=14 Identities=36% Similarity=1.016 Sum_probs=9.2
Q ss_pred CCCCCcccc-ccccc
Q 021320 299 DRTNNCRCL-HGYCS 312 (314)
Q Consensus 299 ~~~~~~~~~-~~~~~ 312 (314)
+-+.+|-|. .|||+
T Consensus 14 dclagcvcgpngfcg 28 (28)
T d1mcvi_ 14 DCLAGCVCGPNGFCG 28 (28)
T ss_dssp GSCTTCCBCTTSBBC
T ss_pred cccccceecCCCcCC
Confidence 456677774 67874
No 10
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.87 E-value=82 Score=19.34 Aligned_cols=8 Identities=63% Similarity=1.493 Sum_probs=6.6
Q ss_pred Cccccccc
Q 021320 303 NCRCLHGY 310 (314)
Q Consensus 303 ~~~~~~~~ 310 (314)
-|+|.+||
T Consensus 29 ~C~C~~gY 36 (46)
T d1k36a_ 29 YCRCEVGY 36 (46)
T ss_dssp EEEECTTC
T ss_pred EeECCCCc
Confidence 48898888
Done!