Query 021325
Match_columns 314
No_of_seqs 118 out of 1252
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 16:01:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021325.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021325hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 6.8E-31 2.3E-35 246.0 20.4 172 15-190 32-234 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 1.7E-29 5.8E-34 235.9 28.8 260 15-278 40-475 (500)
3 3v2y_A Sphingosine 1-phosphate 100.0 7.7E-30 2.6E-34 239.4 26.6 172 15-191 63-249 (520)
4 4amj_A Beta-1 adrenergic recep 100.0 2.8E-30 9.6E-35 226.0 20.2 266 9-282 5-299 (315)
5 3uon_A Human M2 muscarinic ace 100.0 1.1E-29 3.6E-34 234.6 24.2 268 11-282 19-456 (467)
6 3eml_A Human adenosine A2A rec 100.0 8.1E-30 2.8E-34 236.6 22.2 265 15-286 21-469 (488)
7 3rze_A Histamine H1 receptor, 100.0 8.5E-30 2.9E-34 234.3 21.7 269 10-282 3-441 (452)
8 2ks9_A Substance-P receptor; w 100.0 1.2E-28 4.1E-33 220.5 28.2 264 16-279 33-321 (364)
9 3vw7_A Proteinase-activated re 100.0 1.5E-29 5.2E-34 234.7 22.8 181 12-192 17-219 (484)
10 3pbl_A D(3) dopamine receptor, 100.0 2E-29 6.7E-34 233.8 23.2 173 16-192 39-228 (481)
11 4dkl_A MU-type opioid receptor 100.0 5.1E-29 1.7E-33 229.7 25.2 179 13-191 15-211 (464)
12 1u19_A Rhodopsin; G protein-co 100.0 4.4E-29 1.5E-33 221.8 23.7 266 13-282 36-322 (349)
13 4eiy_A Adenosine receptor A2A/ 100.0 9.4E-30 3.2E-34 233.7 19.2 267 14-283 30-425 (447)
14 2lnl_A C-X-C chemokine recepto 100.0 1.2E-28 4.1E-33 214.6 25.1 255 14-278 10-292 (296)
15 2z73_A Rhodopsin; visual pigme 100.0 4E-28 1.4E-32 223.4 28.6 264 11-278 30-330 (448)
16 4ea3_A Fusion protein of nocic 100.0 1.2E-27 4.2E-32 219.4 27.7 264 15-283 125-409 (434)
17 3sn6_R Lysozyme, beta-2 adrene 100.0 4.7E-28 1.6E-32 226.9 24.6 260 15-282 182-489 (514)
18 3odu_A C-X-C chemokine recepto 100.0 1.5E-28 5.1E-33 229.1 16.6 180 12-191 45-239 (502)
19 2koe_A Human cannabinoid recep 97.1 0.0002 6.8E-09 41.4 2.2 33 247-282 4-36 (40)
20 2ki9_A Cannabinoid receptor 2; 96.2 0.00018 6.1E-09 39.7 -2.6 26 208-233 3-28 (33)
21 1hll_A Alpha-2A adrenergic rec 95.6 0.0064 2.2E-07 32.8 2.2 21 92-112 2-22 (32)
22 2lot_A Apelin receptor; membra 92.7 0.0099 3.4E-07 37.8 -1.5 33 17-49 30-62 (64)
23 2z73_A Rhodopsin; visual pigme 71.7 7.5 0.00026 34.4 6.5 36 17-52 33-68 (448)
24 4eiy_A Adenosine receptor A2A/ 65.7 29 0.001 30.3 9.1 26 170-195 211-236 (447)
25 3rze_A Histamine H1 receptor, 58.8 79 0.0027 27.4 10.7 26 161-186 175-200 (452)
26 4amj_A Beta-1 adrenergic recep 57.6 36 0.0012 27.8 7.8 34 18-51 11-44 (315)
27 3eml_A Human adenosine A2A rec 53.6 26 0.00087 31.0 6.5 33 19-51 22-54 (488)
28 3uon_A Human M2 muscarinic ace 48.0 55 0.0019 28.6 7.8 27 161-187 190-216 (467)
29 2ks9_A Substance-P receptor; w 31.4 1.1E+02 0.0038 25.5 6.8 30 22-51 36-65 (364)
30 1u19_A Rhodopsin; G protein-co 29.0 34 0.0012 28.5 3.0 36 16-51 36-71 (349)
31 3v2y_A Sphingosine 1-phosphate 24.9 3.7E+02 0.013 23.9 11.6 78 206-286 416-495 (520)
32 4hkr_A Calcium release-activat 22.7 81 0.0028 24.7 3.6 61 115-179 104-166 (214)
33 4ea3_A Fusion protein of nocic 21.6 1.6E+02 0.0054 25.5 6.0 26 25-50 132-157 (434)
34 2rh1_A Beta-2-adrenergic recep 21.2 4.1E+02 0.014 23.4 8.9 27 24-50 46-72 (500)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.97 E-value=6.8e-31 Score=245.96 Aligned_cols=172 Identities=16% Similarity=0.157 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccc---ccchhHHHHHHHHHHHHHHHHhh---------cC--CCCCccch
Q 021325 15 RRILTALNTGASSLSFVGSGFIVLCYCLFKELR---KFSFKLVFFLALSDMLCSFFSIV---------GD--PSKGFFCS 80 (314)
Q Consensus 15 ~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr---~~~~~~i~~La~adll~~~~~~~---------~~--~~~~~~C~ 80 (314)
...+.+++.+++++|++||+++++++.+.|++| +..|.+++|||++|++.++..++ .. ..++..|+
T Consensus 32 ~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~ 111 (510)
T 4grv_A 32 KVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCR 111 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHH
Confidence 445677788899999999999999998877665 46688999999999998766432 11 23678999
Q ss_pred hhHHHHHHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCC---CC-C----CCC
Q 021325 81 AQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGND---HR-H----LGV 148 (314)
Q Consensus 81 ~~~~~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~---~~-~----~~~ 148 (314)
+.+++...+..+|.+.+++||+|||++|++|... .++.....++++|++++++++|++.+.+ .. + ...
T Consensus 112 ~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~ 191 (510)
T 4grv_A 112 GYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGL 191 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCcc
Confidence 9999999999999999999999999999877432 3456678899999999999999887543 11 1 113
Q ss_pred ceeeecCCCC-chH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021325 149 WCWTQTGRTG-KAV----HFITFYAPLWGAILYNGFTYFQVIRMLNN 190 (314)
Q Consensus 149 ~C~~~~~~~~-~~~----~~~~~~~p~~~~~~~~~~~y~~i~~~~~~ 190 (314)
.|....+... ..+ .+..|++|+++++ ++|..|.+++++
T Consensus 192 ~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~----~~Y~~I~~~l~~ 234 (510)
T 4grv_A 192 VCTPIVDTATVKVVIQVNTFMSFLFPMLVIS----ILNTVIANKLTV 234 (510)
T ss_dssp EEEECSCHHHHHHHHHHHHHHHTHHHHHHHH----HHHHHHHHHHHT
T ss_pred ccccccccchhhhhhhhhhhHHHhhhHHHHH----HHHHHHHHHHHH
Confidence 4543333211 111 2334555655544 677777776653
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.97 E-value=1.7e-29 Score=235.92 Aligned_cols=260 Identities=17% Similarity=0.152 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cC--CCCCccchhhHHH
Q 021325 15 RRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GD--PSKGFFCSAQGYS 85 (314)
Q Consensus 15 ~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~--~~~~~~C~~~~~~ 85 (314)
...+.+++.+++++|++||+++++++...+++|++.+.+++|||++|++.++..++ .. ..++..|++.+++
T Consensus 40 ~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~ 119 (500)
T 2rh1_A 40 VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSI 119 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHH
Confidence 44566778889999999999999999999999999999999999999998765332 12 3477899999999
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHh-cCC-CCC-CCCceeeecC---
Q 021325 86 THFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSF-GND-HRH-LGVWCWTQTG--- 155 (314)
Q Consensus 86 ~~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~-~~~-~~~-~~~~C~~~~~--- 155 (314)
..++..++.+.+++||+|||++|++|..+ ..+.....++++|+++++++.+|.. ++. +.. ....|.....
T Consensus 120 ~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 199 (500)
T 2rh1_A 120 DVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCD 199 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceecccccccc
Confidence 99999999999999999999999877442 3455668899999999999976664 322 111 1134543221
Q ss_pred -CCCchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---------------c--ccC---------------
Q 021325 156 -RTGKAVH----FITFYAPLWGAILYNGFTYFQVIRMLNNATRV---------------A--VGM--------------- 198 (314)
Q Consensus 156 -~~~~~~~----~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~---------------~--~~~--------------- 198 (314)
.....+. +..+++|+++++ ++|..+.+.++++.+. . .+.
T Consensus 200 ~~~~~~y~~~~~~~~~~iPl~ii~----~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (500)
T 2rh1_A 200 FFTNQAYAIASSIVSFYVPLVIMV----FVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSL 275 (500)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHH----HHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCcccc
Confidence 1112222 233455555555 6666666555443221 0 000
Q ss_pred --------------C--------------c-------------------------------------------------h
Q 021325 199 --------------S--------------D-------------------------------------------------R 201 (314)
Q Consensus 199 --------------~--------------~-------------------------------------------------~ 201 (314)
. + +
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (500)
T 2rh1_A 276 NAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLR 355 (500)
T ss_dssp HHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred cccccccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchh
Confidence 0 0 0
Q ss_pred -------------------------------------------HhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcC
Q 021325 202 -------------------------------------------AYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEP 238 (314)
Q Consensus 202 -------------------------------------------~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~~~ 238 (314)
..++++|.++.+.+++++|++||+|+.+..++..+.+
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~ 435 (500)
T 2rh1_A 356 MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQD 435 (500)
T ss_dssp HHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred hhhcccccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0013457777888889999999999999988877765
Q ss_pred CCchHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHH
Q 021325 239 GHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERL 278 (314)
Q Consensus 239 ~~~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~ 278 (314)
...+..+..+..++.++|+++||+||++++++|+++|+.+
T Consensus 436 ~~~~~~~~~~~~~L~y~NS~iNPiIY~~n~~FR~af~~il 475 (500)
T 2rh1_A 436 NLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELL 475 (500)
T ss_dssp TSSCHHHHHHHHHHHHHGGGTHHHHGGGSHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHHHHHhhcchhhhccHHHHHHHHHHH
Confidence 4455667777788999999999999998556666665555
No 3
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.97 E-value=7.7e-30 Score=239.37 Aligned_cols=172 Identities=15% Similarity=0.033 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhhc--------CCCCCccchhhHHHH
Q 021325 15 RRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIVG--------DPSKGFFCSAQGYST 86 (314)
Q Consensus 15 ~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~~--------~~~~~~~C~~~~~~~ 86 (314)
...+.+++.+++++|++||+++++++...|++|++.+.+++|||++|++.++..++. ...++..|++..++.
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~ 142 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSM 142 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGGTTSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeCccccchHHHHH
Confidence 356778888999999999999999999999999999999999999999998764421 223778999999999
Q ss_pred HHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCCCCCCCCceeeecCCCCchH-
Q 021325 87 HFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGKAV- 161 (314)
Q Consensus 87 ~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~- 161 (314)
.++..++.+.+++||+|||++|+ |... .++.....++++|+++++++++|+.+++...+...|..........+
T Consensus 143 ~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 221 (520)
T 3v2y_A 143 FVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYI 221 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCTTCGGGBCSSSTTBBHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccccCCCcccccCCccchHHH
Confidence 99999999999999999999998 6442 34556688899999999999999887654444467875544322222
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021325 162 --HFITFYAPLWGAILYNGFTYFQVIRMLNNA 191 (314)
Q Consensus 162 --~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~ 191 (314)
.+..|++|+++ ..++|..+.+.++++
T Consensus 222 ~~~~~~~~lPl~i----i~~~Y~~I~~~l~~~ 249 (520)
T 3v2y_A 222 LFCTTVFTLLLLS----IVILYCRIYSLVRTR 249 (520)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHhh
Confidence 22234455444 446677776666544
No 4
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.97 E-value=2.8e-30 Score=226.03 Aligned_cols=266 Identities=17% Similarity=0.148 Sum_probs=188.9
Q ss_pred cCChhHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHh-------hcC--CCCCccc
Q 021325 9 SLTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSI-------VGD--PSKGFFC 79 (314)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~-------~~~--~~~~~~C 79 (314)
.++++......+++.+++++|++||++++.++...|++|++.+.++.|||++|++.++..+ ..+ ..++..|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C 84 (315)
T 4amj_A 5 LLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLC 84 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHH
Confidence 4455666778888899999999999999999999999999999999999999999864322 222 3488899
Q ss_pred hhhHHHHHHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCCCCCC---CCceee
Q 021325 80 SAQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHL---GVWCWT 152 (314)
Q Consensus 80 ~~~~~~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~---~~~C~~ 152 (314)
++.+++...+..+|.+.++++|+|||.++++|... .++..+..++.+|+.+++.+.+|.......+. ...|..
T Consensus 85 ~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 164 (315)
T 4amj_A 85 ELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQ 164 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCcccccc
Confidence 99999999999999999999999999999876432 34556688899999999999988775432211 234543
Q ss_pred ecCC----CCchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCC-----chHhHHHHHHHhhhhhHHHH
Q 021325 153 QTGR----TGKAVHFI----TFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMS-----DRAYQFDMKALNRWGYYPLI 219 (314)
Q Consensus 153 ~~~~----~~~~~~~~----~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~~-----~~~~~~~~k~~~~~~~~~~~ 219 (314)
+... ....+... .+.+|+.++ .++|..+.++++++.+..+... ++..++++|..+.+....++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~ip~~ii----~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 240 (315)
T 4amj_A 165 DPGCCDFVTNRAYAIASSIISFYIPLLIM----IFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGV 240 (315)
T ss_dssp CTTCCCCCCCHHHHHHHHCCCCCHHHHHH----HHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhcchHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHH
Confidence 3221 11222222 233555444 4667777777665543222111 11223455677777778889
Q ss_pred HHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhh
Q 021325 220 LIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFW 282 (314)
Q Consensus 220 f~i~W~p~~i~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~ 282 (314)
|++||+|+.+..+....+++..+.....+...+..+++++||++|+ .+ +++|+.+++.+
T Consensus 241 f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~-~~---~~fR~~~~~~l 299 (315)
T 4amj_A 241 FTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RS---PDFRKAFKRLL 299 (315)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSSCHHHHHHHHHHHHHGGGTHHHHGG-GS---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhccccHHHHc-Cc---HHHHHHHHHHh
Confidence 9999999999988877766545566667777789999999999999 55 55555555433
No 5
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.97 E-value=1.1e-29 Score=234.64 Aligned_cols=268 Identities=14% Similarity=0.104 Sum_probs=194.0
Q ss_pred ChhHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cC--CCCCccchh
Q 021325 11 TAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GD--PSKGFFCSA 81 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~--~~~~~~C~~ 81 (314)
++.+...+.+++.+++++|++||+++++++...+++|++.+.++.|||++|++.++..++ .. ..++..|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 98 (467)
T 3uon_A 19 KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDL 98 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhH
Confidence 344456677888889999999999999999999999999999999999999998755332 22 347889999
Q ss_pred hHHHHHHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCC-----CCCCCCceee
Q 021325 82 QGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGND-----HRHLGVWCWT 152 (314)
Q Consensus 82 ~~~~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~-----~~~~~~~C~~ 152 (314)
.+++..++..++.+.++++|+|||+++++|..+ ..+..+..++++|+++++++++++.++. .......|..
T Consensus 99 ~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 178 (467)
T 3uon_A 99 WLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYI 178 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCccee
Confidence 999999999999999999999999999877542 3455668899999999999999876532 2223356876
Q ss_pred ecCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC----C-----------------------------
Q 021325 153 QTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGM----S----------------------------- 199 (314)
Q Consensus 153 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~----~----------------------------- 199 (314)
..... ..+.+..+.+.+++++++..++|..+.++++++.+..... .
T Consensus 179 ~~~~~-~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (467)
T 3uon_A 179 QFFSN-AAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNA 257 (467)
T ss_dssp GGGGS-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHHH
T ss_pred ecCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCcccc
Confidence 55432 2222333333334444555577888887777653210000 0
Q ss_pred --------------------------------------------------------------------------------
Q 021325 200 -------------------------------------------------------------------------------- 199 (314)
Q Consensus 200 -------------------------------------------------------------------------------- 199 (314)
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (467)
T 3uon_A 258 AKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRML 337 (467)
T ss_dssp HHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred cccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccchh
Confidence
Q ss_pred ---------------------------------------chHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 021325 200 ---------------------------------------DRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGH 240 (314)
Q Consensus 200 ---------------------------------------~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~~~~~ 240 (314)
.+..++++|..+.+..++++|++||+|+.+..++....+..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~ 417 (467)
T 3uon_A 338 QQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPC 417 (467)
T ss_dssp HTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTT
T ss_pred hhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcc
Confidence 00001224566677778899999999999998888776654
Q ss_pred chHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhh
Q 021325 241 KIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFW 282 (314)
Q Consensus 241 ~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~ 282 (314)
.+.....+...+..+++++||+||++.+ +++|+.+++.+
T Consensus 418 ~~~~~~~i~~~L~~~ns~~NPiIY~~~~---~~fR~~~~~ll 456 (467)
T 3uon_A 418 IPNTVWTIGYWLCYINSTINPACYALCN---ATFKKTFKHLL 456 (467)
T ss_dssp SCHHHHHHHHHHHHHTTTHHHHHHHHHC---HHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHcC---HHHHHHHHHHH
Confidence 5667778888899999999999999987 55555555543
No 6
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.97 E-value=8.1e-30 Score=236.56 Aligned_cols=265 Identities=13% Similarity=0.148 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cCCCCCccchhhHHHHH
Q 021325 15 RRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GDPSKGFFCSAQGYSTH 87 (314)
Q Consensus 15 ~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~~~~~~~C~~~~~~~~ 87 (314)
.....+++.+++++|++||+++++++...+++|+..+.++.|||++|++.++..++ ....+...|++.+++..
T Consensus 21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~ 100 (488)
T 3eml_A 21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVL 100 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCEECHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence 34567778889999999999999999999999999999999999999998765432 22337789999999999
Q ss_pred HHhHhHHHHHHHHHHHHHHHHhhcCC----chhhhhhhhhhHhhHHHHHHHHHHHhcCCC-CC------CCCceeee---
Q 021325 88 FFCVASFLWTTTIAFTLHRTVVQHKT----DVEDLEAMFHLYVWGTSLVVTVVRSFGNDH-RH------LGVWCWTQ--- 153 (314)
Q Consensus 88 ~~~~~s~~~l~~ia~~~y~~i~~~~~----~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~------~~~~C~~~--- 153 (314)
++..++.+.+++||+|||+++++|.. ...+.....++++|+++++++++++.++.. +. ....|...
T Consensus 101 ~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 180 (488)
T 3eml_A 101 VLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVA 180 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTTCEE
T ss_pred HHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccce
Confidence 99999999999999999999987643 234556688899999999999998876542 11 11334321
Q ss_pred ----cCCCCchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC---------------------------
Q 021325 154 ----TGRTGKAV----HFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGM--------------------------- 198 (314)
Q Consensus 154 ----~~~~~~~~----~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~--------------------------- 198 (314)
+......+ .+..+++|+++++ ++|..+.++++++.+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~P~~ii~----~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (488)
T 3eml_A 181 CLFEDVVPMNYMVYFNFFACVLVPLLLML----GVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLT 256 (488)
T ss_dssp CCHHHHSCHHHHHTTTHHHHTHHHHHHHH----HHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEE
T ss_pred eeccccccchhHHHhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccccCC
Confidence 11111111 2334455555544 77777777776543210000
Q ss_pred --------------------------------------------------------------------------------
Q 021325 199 -------------------------------------------------------------------------------- 198 (314)
Q Consensus 199 -------------------------------------------------------------------------------- 198 (314)
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (488)
T 3eml_A 257 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGF 336 (488)
T ss_dssp SSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHHTTC
T ss_pred CCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCccCC
Confidence
Q ss_pred ----------------------------------------------CchHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 021325 199 ----------------------------------------------SDRAYQFDMKALNRWGYYPLILIGSWAFGTINRI 232 (314)
Q Consensus 199 ----------------------------------------------~~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~ 232 (314)
..+..++++|.++.+..++++|++||+|+.+..+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~ 416 (488)
T 3eml_A 337 TNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINC 416 (488)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 0000123456666777788999999999999988
Q ss_pred HHhhcCC--CchHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhhhhhh
Q 021325 233 HDFIEPG--HKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWPDRF 286 (314)
Q Consensus 233 ~~~~~~~--~~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~~~~~ 286 (314)
+..+.++ ....+...+...+..+++++||++|++.+ +++|+.+++.++.++
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~---~~fR~~~~~l~~~~~ 469 (488)
T 3eml_A 417 FTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRI---REFRQTFRKIIRSHV 469 (488)
T ss_dssp HHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHTT
T ss_pred HHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcC---HHHHHHHHHHHhhcc
Confidence 8777543 34566777888899999999999999887 555555555444333
No 7
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.97 E-value=8.5e-30 Score=234.30 Aligned_cols=269 Identities=11% Similarity=0.019 Sum_probs=187.8
Q ss_pred CChhHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cC--CCCCccch
Q 021325 10 LTAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GD--PSKGFFCS 80 (314)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~--~~~~~~C~ 80 (314)
.+.++...+.+++.+++++|++||+++++++...+++|++.+.+++|||++|++.++..++ .. ..++..|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~ 82 (452)
T 3rze_A 3 MASPQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCL 82 (452)
T ss_dssp ------CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHh
Confidence 3445556677888899999999999999999999999999999999999999998754332 22 23778999
Q ss_pred hhHHHHHHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCCCCC-----CCCcee
Q 021325 81 AQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGNDHRH-----LGVWCW 151 (314)
Q Consensus 81 ~~~~~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-----~~~~C~ 151 (314)
+.+++..++..++.+.++++|+|||+++++|..+ ..+.....++++|++++++++|.+....+.. ....|+
T Consensus 83 ~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~ 162 (452)
T 3rze_A 83 FWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCE 162 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeec
Confidence 9999999999999999999999999999877542 3455668889999999988777554333321 235686
Q ss_pred eecCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccC---------------------------------
Q 021325 152 TQTGRTGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGM--------------------------------- 198 (314)
Q Consensus 152 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~--------------------------------- 198 (314)
.+.... ..+.+..+.+.+++++++..++|..+.++++++.+.....
T Consensus 163 ~~~~~~-~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (452)
T 3rze_A 163 TDFYDV-TWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLN 241 (452)
T ss_dssp CSCTTC-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHH
T ss_pred CCCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCC
Confidence 554432 2222223333334444455577777777776542110000
Q ss_pred --------------------------------------------------------------------------------
Q 021325 199 -------------------------------------------------------------------------------- 198 (314)
Q Consensus 199 -------------------------------------------------------------------------------- 198 (314)
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (452)
T 3rze_A 242 AAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRM 321 (452)
T ss_dssp HHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHH
T ss_pred cccccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcch
Confidence
Q ss_pred ---------------------------------------CchHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 021325 199 ---------------------------------------SDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFIEPG 239 (314)
Q Consensus 199 ---------------------------------------~~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~~~~ 239 (314)
..+..++++|..+.+..++++|++||+|+.+..++....++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~ 401 (452)
T 3rze_A 322 LQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKN 401 (452)
T ss_dssp HHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hhhcCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcc
Confidence 00001134566777777899999999999999888777555
Q ss_pred CchHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhh
Q 021325 240 HKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFW 282 (314)
Q Consensus 240 ~~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~ 282 (314)
........+...+..+++++||+||++.+ +++|+.+++.+
T Consensus 402 ~~~~~~~~~~~~L~~~ns~~NPiIY~~~~---~~fR~~~~~ll 441 (452)
T 3rze_A 402 CCNEHLHMFTIWLGYINSTLNPLIYPLCN---ENFKKTFKRIL 441 (452)
T ss_dssp CSCTTTHHHHHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcccchhhhhcc---HHHHHHHHHHH
Confidence 44455666778899999999999999987 55555555543
No 8
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.97 E-value=1.2e-28 Score=220.54 Aligned_cols=264 Identities=15% Similarity=0.122 Sum_probs=186.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cC--CCCCccchhhHHHH
Q 021325 16 RILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GD--PSKGFFCSAQGYST 86 (314)
Q Consensus 16 ~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~--~~~~~~C~~~~~~~ 86 (314)
....+++.+++++|++||+++++++...|++|++.+.++.|||++|++.++..++ .. ..++..|+..+++.
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 112 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFP 112 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHH
Confidence 3446778889999999999999999999999999999999999999988754321 22 33778999999999
Q ss_pred HHHhHhHHHHHHHHHHHHHHHHhhcCCc--hhhhhhhhhhHhhHHHHHHHHHHHhcCCCC--CCCCceeeecCCCC----
Q 021325 87 HFFCVASFLWTTTIAFTLHRTVVQHKTD--VEDLEAMFHLYVWGTSLVVTVVRSFGNDHR--HLGVWCWTQTGRTG---- 158 (314)
Q Consensus 87 ~~~~~~s~~~l~~ia~~~y~~i~~~~~~--~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~~~---- 158 (314)
.++..++.+.++++|+|||.++++|... .++..+..++++|+++++.++++.....+. +....|..+.....
T Consensus 113 ~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 192 (364)
T 2ks9_A 113 IAAVFASIYSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIY 192 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCCSCCCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecCCCcchhHH
Confidence 9999999999999999999999877432 344566788899999999988765433332 23356865433221
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--CCchHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Q 021325 159 -KAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVG--MSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDF 235 (314)
Q Consensus 159 -~~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~--~~~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~~~~ 235 (314)
..+.+..+..-+++++++..++|..+.+++++..+.... ..+++.++++|..+.+..+.++|++||+|+.+..+...
T Consensus 193 ~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~ 272 (364)
T 2ks9_A 193 EKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPY 272 (364)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222222333444555557888888877665432221 12233444567777777788999999999999887766
Q ss_pred hcCCC----chHHHHHHHHHhhhhhhHHHHHhhccch-hHHHHHHHHHh
Q 021325 236 IEPGH----KIFWLTFLDVGTAALMGLFNSIAYGLNS-SVRRAIHERLD 279 (314)
Q Consensus 236 ~~~~~----~~~~~~~l~~~l~~~~g~~n~iiy~~~~-~~~~~~r~~~~ 279 (314)
..++. .......+...+..+++++||++|++.+ ++|+++++.++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 321 (364)
T 2ks9_A 273 INPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFR 321 (364)
T ss_dssp HSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHS
T ss_pred hCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 64331 1234555666789999999999999886 55555555443
No 9
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.5e-29 Score=234.69 Aligned_cols=181 Identities=15% Similarity=0.091 Sum_probs=133.8
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHh-------hc--CCCCCccchhh
Q 021325 12 AHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSI-------VG--DPSKGFFCSAQ 82 (314)
Q Consensus 12 ~~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~-------~~--~~~~~~~C~~~ 82 (314)
+.....+.+++.+++++|++||+++++++...+++|++.+.++.|||++|++.++... .. ...++..|++.
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 96 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFV 96 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhHH
Confidence 4445667788888999999999999999999999999999999999999999875422 12 23388999999
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCCCC---C-CCCceeeec
Q 021325 83 GYSTHFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGNDHR---H-LGVWCWTQT 154 (314)
Q Consensus 83 ~~~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~---~-~~~~C~~~~ 154 (314)
+++..++..++.+.+++||+|||+++++|..+ ..+.....++++|+++++++++++.+.... + ....|....
T Consensus 97 ~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 176 (484)
T 3vw7_A 97 TAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVL 176 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccC
Confidence 99999999999999999999999999877543 345566888999999999999998765421 1 225686544
Q ss_pred CCCC--ch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021325 155 GRTG--KA---VHFITFYAPLWGAILYNGFTYFQVIRMLNNAT 192 (314)
Q Consensus 155 ~~~~--~~---~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~ 192 (314)
.... .. +.+..+.+-+++++++..++|..+.+++++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~ 219 (484)
T 3vw7_A 177 SETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSA 219 (484)
T ss_dssp SSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhh
Confidence 3221 11 22222233334444555578888888776654
No 10
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.97 E-value=2e-29 Score=233.80 Aligned_cols=173 Identities=17% Similarity=0.177 Sum_probs=130.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh--------cC--CCCCccchhhHHH
Q 021325 16 RILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV--------GD--PSKGFFCSAQGYS 85 (314)
Q Consensus 16 ~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~--------~~--~~~~~~C~~~~~~ 85 (314)
..+.+++.+++++|++||+++++++...+++|++.+.++.|||++|++.++..++ .. ..++..|++.+++
T Consensus 39 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~ 118 (481)
T 3pbl_A 39 AYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTL 118 (481)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHH
Confidence 3455667889999999999999999999999999999999999999998765332 12 2378899999999
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHhhcCC-------chhhhhhhhhhHhhHHHHHHHHHHHhcCCCCCCCCceeeecCCCC
Q 021325 86 THFFCVASFLWTTTIAFTLHRTVVQHKT-------DVEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTG 158 (314)
Q Consensus 86 ~~~~~~~s~~~l~~ia~~~y~~i~~~~~-------~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 158 (314)
..++..++.+.++++|+|||+++++|.. ...+.....++++|+++++++++++.+.+.......|....+...
T Consensus 119 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 198 (481)
T 3pbl_A 119 DVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISNPDFV 198 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSSTTCCSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccCCCCcccccCccHH
Confidence 9999999999999999999999976632 223455688899999999999999887666555567865433211
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 021325 159 KAVHFITFYAPLWGAILYNGFTYFQVIRMLNNAT 192 (314)
Q Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~ 192 (314)
....+..+++|+++ ..++|..+.+.+++..
T Consensus 199 ~~~~~~~~~ip~~i----i~~~y~~i~~~l~~~~ 228 (481)
T 3pbl_A 199 IYSSVVSFYLPFGV----TVLVYARIYVVLKQRR 228 (481)
T ss_dssp HHHHHHHTHHHHHH----HHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHhh
Confidence 11223344455444 4477777777776543
No 11
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.97 E-value=5.1e-29 Score=229.74 Aligned_cols=179 Identities=13% Similarity=0.103 Sum_probs=133.4
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh------c--CCCCCccchhhHH
Q 021325 13 HDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV------G--DPSKGFFCSAQGY 84 (314)
Q Consensus 13 ~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~------~--~~~~~~~C~~~~~ 84 (314)
.....+.+++.+++++|++||+++++++...+++|++.+.++.|||++|++.++.... . ...++..|++.++
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 94 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVIS 94 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhHHH
Confidence 3455677788889999999999999999999999999999999999999998765221 1 2348899999999
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCCCC--CCCCceeeecCCCC
Q 021325 85 STHFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGNDHR--HLGVWCWTQTGRTG 158 (314)
Q Consensus 85 ~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~~~ 158 (314)
+..++..++.+.++++|+|||.++++|..+ .++.....++++|+++++++++++....+. +....|........
T Consensus 95 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 174 (464)
T 4dkl_A 95 IDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPT 174 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcc
Confidence 999999999999999999999999876432 345566888999999999999888754432 33356766544332
Q ss_pred c----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021325 159 K----AVHFITFYAPLWGAILYNGFTYFQVIRMLNNA 191 (314)
Q Consensus 159 ~----~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~ 191 (314)
. .+.+..+.+.+++++++..++|..+.+++++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~ 211 (464)
T 4dkl_A 175 WYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSV 211 (464)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 12222333333444555557788887777654
No 12
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.97 E-value=4.4e-29 Score=221.81 Aligned_cols=266 Identities=12% Similarity=0.052 Sum_probs=191.4
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cC--CCCCccchhhH
Q 021325 13 HDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GD--PSKGFFCSAQG 83 (314)
Q Consensus 13 ~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~--~~~~~~C~~~~ 83 (314)
.+.....+++.+++++|++||+++++++.+.|++|++.+.++.|||++|++.++..++ .. ..++..|+..+
T Consensus 36 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 115 (349)
T 1u19_A 36 WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEG 115 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHH
Confidence 3455677778889999999999999999999999999999999999999998865332 12 33778999999
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHhhcCCc---hhhhhhhhhhHhhHHHHHHHHHHHhcCC-CC--CCCCceeeecCCC
Q 021325 84 YSTHFFCVASFLWTTTIAFTLHRTVVQHKTD---VEDLEAMFHLYVWGTSLVVTVVRSFGND-HR--HLGVWCWTQTGRT 157 (314)
Q Consensus 84 ~~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~---~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~--~~~~~C~~~~~~~ 157 (314)
++...+..++.+.++++|+|||.++++|... .++.....++++|+++++.+.+++.+.. +. +....|..+....
T Consensus 116 ~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~ 195 (349)
T 1u19_A 116 FFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTP 195 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCccceeeccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeecccccCc
Confidence 9999999999999999999999999877442 3455667888999999999999887643 22 2234676543221
Q ss_pred -----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCchHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 021325 158 -----GKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRI 232 (314)
Q Consensus 158 -----~~~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~ 232 (314)
...+....+..-+++++++..++|..+.++++++.+..+. .++..++++|..+.+..+.++|++||+|+.+..+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~ 274 (349)
T 1u19_A 196 HEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE-SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAF 274 (349)
T ss_dssp CGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 1122222222333444555558888888877765443222 2233344456666667788899999999998877
Q ss_pred HHhhcCCC-chHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhh
Q 021325 233 HDFIEPGH-KIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFW 282 (314)
Q Consensus 233 ~~~~~~~~-~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~ 282 (314)
.....++. .......+...+..+++++||++|++.+ +++|+.+++.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~---~~fR~~~~~~~ 322 (349)
T 1u19_A 275 YIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMN---KQFRNCMVTTL 322 (349)
T ss_dssp HHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTC---HHHHHHHHHHH
T ss_pred hheecCCcccchHHHHHHHHHHHHHHHHhHHHHHHHh---HHHHHHHHHHh
Confidence 76664332 3345566777789999999999999987 55555555433
No 13
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.97 E-value=9.4e-30 Score=233.67 Aligned_cols=267 Identities=13% Similarity=0.127 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cCCCCCccchhhHHHH
Q 021325 14 DRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GDPSKGFFCSAQGYST 86 (314)
Q Consensus 14 ~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~~~~~~~C~~~~~~~ 86 (314)
.......++.+++++|++||+++++++...+++|++.+.++.|||++|++.++..++ ....+...|++.+++.
T Consensus 30 ~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~C~~~~~~~ 109 (447)
T 4eiy_A 30 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFV 109 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCEEEHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccHHHHHHHHH
Confidence 344566777788999999999999999999999999999999999999998765432 2223778999999999
Q ss_pred HHHhHhHHHHHHHHHHHHHHHHhhcCC----chhhhhhhhhhHhhHHHHHHHHHHHhcCCC-CCCC------Ccee----
Q 021325 87 HFFCVASFLWTTTIAFTLHRTVVQHKT----DVEDLEAMFHLYVWGTSLVVTVVRSFGNDH-RHLG------VWCW---- 151 (314)
Q Consensus 87 ~~~~~~s~~~l~~ia~~~y~~i~~~~~----~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~~------~~C~---- 151 (314)
.++..++.+.++++|+|||.++++|.. ...+.....++++|+++++++++++.++.. +... ..|.
T Consensus 110 ~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 189 (447)
T 4eiy_A 110 LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQV 189 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccch
Confidence 999999999999999999999987643 234556688889999999999998876542 1110 2232
Q ss_pred ---eecCCCCchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---------------------------
Q 021325 152 ---TQTGRTGKAV----HFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVG--------------------------- 197 (314)
Q Consensus 152 ---~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~--------------------------- 197 (314)
.........+ .+..+++|++++++.+..++..+.++.++.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (447)
T 4eiy_A 190 ACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAA 269 (447)
T ss_dssp ECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhcc
Confidence 2221111111 122356777776655444444444433221110000
Q ss_pred -----------------------------------------------------------------------CCchHhHHH
Q 021325 198 -----------------------------------------------------------------------MSDRAYQFD 206 (314)
Q Consensus 198 -----------------------------------------------------------------------~~~~~~~~~ 206 (314)
..++..+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (447)
T 4eiy_A 270 ALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKE 349 (447)
T ss_dssp HHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHH
Confidence 000011234
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcCC--CchHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhhh
Q 021325 207 MKALNRWGYYPLILIGSWAFGTINRIHDFIEPG--HKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWP 283 (314)
Q Consensus 207 ~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~~~~--~~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~~ 283 (314)
+|.++.+..++++|++||+|+.+..++....++ ....+...+...+..+++++||++|++.+ +++|+.+++.++
T Consensus 350 ~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~---~~fR~~~~~~~~ 425 (447)
T 4eiy_A 350 VHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRI---REFRQTFRKIIR 425 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhcc---HHHHHHHHHHHH
Confidence 556666777888999999999999888776543 24566777888899999999999999887 455555444443
No 14
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=214.62 Aligned_cols=255 Identities=15% Similarity=0.132 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cCCCCCccchhhHHHH
Q 021325 14 DRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GDPSKGFFCSAQGYST 86 (314)
Q Consensus 14 ~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~~~~~~~C~~~~~~~ 86 (314)
+...+.+.+.+++++|++||+++++++.+.|++|++.|.++.|||++|++.++...+ +...++..|+..++..
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~~~~~~~~~~~~c~~~~~~~ 89 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLK 89 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhhccCCCccchhHHHHHhhhh
Confidence 345567778889999999999999999999999999999999999999998765322 2345899999999999
Q ss_pred HHHhHhHHHHHHHHHHHHHHHHhhcCCch---hhhhhhhhhHhhHHHHHHHHHHHhcCCC-CCC--CCceeee---cCC-
Q 021325 87 HFFCVASFLWTTTIAFTLHRTVVQHKTDV---EDLEAMFHLYVWGTSLVVTVVRSFGNDH-RHL--GVWCWTQ---TGR- 156 (314)
Q Consensus 87 ~~~~~~s~~~l~~ia~~~y~~i~~~~~~~---~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~--~~~C~~~---~~~- 156 (314)
..+..+|.+.++++|+|||.++++|.+.. ++..+..++.+|..+++.+.++..+.+. .+. ...|... ...
T Consensus 90 ~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (296)
T 2lnl_A 90 EVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAK 169 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTT
T ss_pred hhhHHHHHHHHHHHHhhhhhhhhhccccchhhhhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccchh
Confidence 99999999999999999999998775432 3344567778999999999988776542 211 1222111 111
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCchHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 021325 157 TGKAVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFI 236 (314)
Q Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~ 236 (314)
....+....+.....+++.+...+|..+.+++++. +.++++|..|.+.....+|++||+|+.+..+....
T Consensus 170 ~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~----------~~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~ 239 (296)
T 2lnl_A 170 WRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKA----------HMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTL 239 (296)
T ss_dssp TTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSC----------CCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------hhhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHH
Confidence 11112222222222333344446666555443321 11223466777777889999999999998887765
Q ss_pred cCCCc----------hHHHHHHHHHhhhhhhHHHHHhhccch-hHHHHHHHHH
Q 021325 237 EPGHK----------IFWLTFLDVGTAALMGLFNSIAYGLNS-SVRRAIHERL 278 (314)
Q Consensus 237 ~~~~~----------~~~~~~l~~~l~~~~g~~n~iiy~~~~-~~~~~~r~~~ 278 (314)
.+... ......+...+..+|+++||++|++.+ ++||++||.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll 292 (296)
T 2lnl_A 240 MRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKIL 292 (296)
T ss_dssp TCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHH
T ss_pred hccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 43211 112334566688999999999999987 4455554443
No 15
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.97 E-value=4e-28 Score=223.38 Aligned_cols=264 Identities=16% Similarity=0.182 Sum_probs=184.6
Q ss_pred ChhHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHH-h-------hcCC--CCCccch
Q 021325 11 TAHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFS-I-------VGDP--SKGFFCS 80 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~-~-------~~~~--~~~~~C~ 80 (314)
.+.....+.++..+++++|++||+++++++.+.|++|+..+.+++|||++|++.++.. + .... .++..|+
T Consensus 30 ~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~ 109 (448)
T 2z73_A 30 PDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACK 109 (448)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHH
Confidence 3344556777888899999999999999999999999999999999999999987653 1 1222 3678999
Q ss_pred hhHHHHHHHhHhHHHHHHHHHHHHHHHHhhcCC----chhhhhhhhhhHhhHHHHHHHHHHHhcCCC---CCCCCceeee
Q 021325 81 AQGYSTHFFCVASFLWTTTIAFTLHRTVVQHKT----DVEDLEAMFHLYVWGTSLVVTVVRSFGNDH---RHLGVWCWTQ 153 (314)
Q Consensus 81 ~~~~~~~~~~~~s~~~l~~ia~~~y~~i~~~~~----~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~---~~~~~~C~~~ 153 (314)
+.+++..++..++.++++++|+|||++++++.. ..++..+..++++|+++++++++++.+++. +.....|+.+
T Consensus 110 ~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~ 189 (448)
T 2z73_A 110 VYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFD 189 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecc
Confidence 999999999999999999999999999987643 245667789999999999999988876532 2223568765
Q ss_pred cCCCCc---hHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccccCCc---h----HhHHHHHHHhhhhh
Q 021325 154 TGRTGK---AVH----FITFYAPLWGAILYNGFTYFQVIRMLNNATR----VAVGMSD---R----AYQFDMKALNRWGY 215 (314)
Q Consensus 154 ~~~~~~---~~~----~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~----~~~~~~~---~----~~~~~~k~~~~~~~ 215 (314)
....+. .+. +..+++|+++++ ++|..+.++++++.+ ..+...+ + ..++++|..+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~lP~~ii~----~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~ 265 (448)
T 2z73_A 190 YISRDSTTRSNILCMFILGFFGPILIIF----FCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIV 265 (448)
T ss_dssp CSCCSHHHHHHHHHHHHHTTHHHHHHHH----HHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcchhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHH
Confidence 433221 111 223445555554 555555544443221 1111111 1 11234566666677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHhhhhhhHHHHHhhccch-hHHHHHHHHH
Q 021325 216 YPLILIGSWAFGTINRIHDFIEPGH-KIFWLTFLDVGTAALMGLFNSIAYGLNS-SVRRAIHERL 278 (314)
Q Consensus 216 ~~~~f~i~W~p~~i~~~~~~~~~~~-~~~~~~~l~~~l~~~~g~~n~iiy~~~~-~~~~~~r~~~ 278 (314)
++++|++||+|+.+..++...+... .......+...+..+++++||++|++.+ ++|+++++.+
T Consensus 266 iv~~F~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~ 330 (448)
T 2z73_A 266 IVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTF 330 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHH
Confidence 8889999999999888776665321 2344556667788999999999999886 5555555444
No 16
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.96 E-value=1.2e-27 Score=219.40 Aligned_cols=264 Identities=11% Similarity=0.093 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHh------hc--CCCCCccchhhHHHH
Q 021325 15 RRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSI------VG--DPSKGFFCSAQGYST 86 (314)
Q Consensus 15 ~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~------~~--~~~~~~~C~~~~~~~ 86 (314)
...+.+++.+++++|++||+++++++...+++|++.+.++.|||++|++.++... .. ...++..|+..+++.
T Consensus 125 ~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 204 (434)
T 4ea3_A 125 KVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAID 204 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcCcccHHHHHHHHH
Confidence 4455667778899999999999999999999999999999999999998753321 11 234788999999999
Q ss_pred HHHhHhHHHHHHHHHHHHHHHHhhcCCc----hhhhhhhhhhHhhHHHHHHHHHHHhcCC--CCCCCCceeeecCCCCc-
Q 021325 87 HFFCVASFLWTTTIAFTLHRTVVQHKTD----VEDLEAMFHLYVWGTSLVVTVVRSFGND--HRHLGVWCWTQTGRTGK- 159 (314)
Q Consensus 87 ~~~~~~s~~~l~~ia~~~y~~i~~~~~~----~~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~~~~~~C~~~~~~~~~- 159 (314)
.++..++.+.++++|+|||.++++|... .++..+..++++|++++++++++..... +.+....|.........
T Consensus 205 ~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~ 284 (434)
T 4ea3_A 205 YYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDY 284 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCCSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecCChHhH
Confidence 9999999999999999999999877443 3455667888999999999988765432 23334678766543321
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCchHhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 021325 160 ---AVHFITFYAPLWGAILYNGFTYFQVIRMLNNATRVAVGMSDRAYQFDMKALNRWGYYPLILIGSWAFGTINRIHDFI 236 (314)
Q Consensus 160 ---~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~ 236 (314)
.+.+..+...+++++++..++|..+.+++++.++.. .+.++.++++|..+.+..++++|++||+|+.+..+....
T Consensus 285 ~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~ 362 (434)
T 4ea3_A 285 WGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLS--GSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGL 362 (434)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--cchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 122223333344455556688888988887654322 222333444566777777888999999999998877665
Q ss_pred cCCC-c--hHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhhh
Q 021325 237 EPGH-K--IFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWP 283 (314)
Q Consensus 237 ~~~~-~--~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~~ 283 (314)
.... . ......+...+..+++++||+||++.+ +++|+.+++.+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~---~~fR~~~~~~~~ 409 (434)
T 4ea3_A 363 GVQPSSETAVAILRFCTALGYVNSCLNPILYAFLD---ENFKACFRKFCC 409 (434)
T ss_dssp TCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---HHHHHHHC----
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhC
Confidence 4321 1 223444555588999999999999987 666666665443
No 17
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.96 E-value=4.7e-28 Score=226.86 Aligned_cols=260 Identities=16% Similarity=0.121 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHhh-------cC--CCCCccchhhHHH
Q 021325 15 RRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSIV-------GD--PSKGFFCSAQGYS 85 (314)
Q Consensus 15 ~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~~-------~~--~~~~~~C~~~~~~ 85 (314)
...+.+++.+++++|++||+++++++...|++|++.+.+++|||++|++.++..++ .. ..++..|++.+++
T Consensus 182 ~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l 261 (514)
T 3sn6_R 182 VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSI 261 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHH
Confidence 44567778889999999999999999999999999999999999999987654321 22 3488899999999
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHhhcCC----chhhhhhhhhhHhhHHHHHHHHHHHhcCCC--CC-CCCceeeecC---
Q 021325 86 THFFCVASFLWTTTIAFTLHRTVVQHKT----DVEDLEAMFHLYVWGTSLVVTVVRSFGNDH--RH-LGVWCWTQTG--- 155 (314)
Q Consensus 86 ~~~~~~~s~~~l~~ia~~~y~~i~~~~~----~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~~-~~~~C~~~~~--- 155 (314)
..++..++.+.++++|+|||+++++|.. ..++.....++++|+++++++.+|...... .. ....|.....
T Consensus 262 ~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 341 (514)
T 3sn6_R 262 DVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCD 341 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccc
Confidence 9999999999999999999999987743 234556688999999999999877653221 11 1233432221
Q ss_pred -CCCchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----ccccc--------------------CCchHhHHH
Q 021325 156 -RTGKAV----HFITFYAPLWGAILYNGFTYFQVIRMLNNAT----RVAVG--------------------MSDRAYQFD 206 (314)
Q Consensus 156 -~~~~~~----~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~~----~~~~~--------------------~~~~~~~~~ 206 (314)
.....+ ....+++|+++++ ++|..+.++++++. +.... ...+..+++
T Consensus 342 ~~~~~~y~~~~~~~~~~lP~~ii~----~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (514)
T 3sn6_R 342 FFTNQAYAIASSIVSFYVPLVIMV----FVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKE 417 (514)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHH----HHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHH
Confidence 111122 2334556665555 55555554444321 11100 000111234
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhh
Q 021325 207 MKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFW 282 (314)
Q Consensus 207 ~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~ 282 (314)
+|..+.+..++++|++||+|+.+..++....+.........+...+..+++++||+||+ .+ +++|+.+++.+
T Consensus 418 ~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~---~~fR~~~~~~l 489 (514)
T 3sn6_R 418 HKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RS---PDFRIAFQELL 489 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHHHT-TC---HHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHhhhHHhhc-CC---HHHHHHHHHHh
Confidence 56677777788899999999999888877755444556667777899999999999999 55 55666666544
No 18
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.96 E-value=1.5e-28 Score=229.05 Aligned_cols=180 Identities=16% Similarity=0.112 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHh-------hcCCCCCccchhhHH
Q 021325 12 AHDRRILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFKLVFFLALSDMLCSFFSI-------VGDPSKGFFCSAQGY 84 (314)
Q Consensus 12 ~~~~~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~~i~~La~adll~~~~~~-------~~~~~~~~~C~~~~~ 84 (314)
+.....+.+++.+++++|++||+++++++...+++|++.+.++.|||++|++.++... .....++..|++.++
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~~~~~~~~~C~~~~~ 124 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHV 124 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCchhhhhHHH
Confidence 3445667788889999999999999999999999999999999999999999864311 123347778999999
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHhhcCCch----hhhhhhhhhHhhHHHHHHHHHHHhcCCCC--CCCCceeeecCCCC
Q 021325 85 STHFFCVASFLWTTTIAFTLHRTVVQHKTDV----EDLEAMFHLYVWGTSLVVTVVRSFGNDHR--HLGVWCWTQTGRTG 158 (314)
Q Consensus 85 ~~~~~~~~s~~~l~~ia~~~y~~i~~~~~~~----~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~~~ 158 (314)
+..++..++.+.+++||+|||++|++|.... .+.....++++|+++++++++++....+. .....|........
T Consensus 125 ~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 204 (502)
T 3odu_A 125 IYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDL 204 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEEEEECCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceEEeecCCchh
Confidence 9999999999999999999999998876432 23445788899999999999988754432 22356864443211
Q ss_pred c--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 021325 159 K--AVHFITFYAPLWGAILYNGFTYFQVIRMLNNA 191 (314)
Q Consensus 159 ~--~~~~~~~~~p~~~~~~~~~~~y~~i~~~~~~~ 191 (314)
. .+.+..+.+-+++++++.+++|..+.++++++
T Consensus 205 ~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~ 239 (502)
T 3odu_A 205 WVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHS 239 (502)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1 12222222333444455557888888877764
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=97.15 E-value=0.0002 Score=41.37 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=26.1
Q ss_pred HHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhh
Q 021325 247 FLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFW 282 (314)
Q Consensus 247 ~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~ 282 (314)
.+...+..+++++||++|++.+ +++|+.+++.+
T Consensus 4 ~~~~~l~~~ns~lNPiIY~~~~---~~fr~~~~~~~ 36 (40)
T 2koe_A 4 AFASMLCLLNSTVNPIIYALRS---KDLRHAFRSMF 36 (40)
T ss_dssp HHHHHHHHHHHHSSTTTTBTTB---HHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHh
Confidence 3455678899999999999998 77777776543
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=96.21 E-value=0.00018 Score=39.68 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=19.6
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHH
Q 021325 208 KALNRWGYYPLILIGSWAFGTINRIH 233 (314)
Q Consensus 208 k~~~~~~~~~~~f~i~W~p~~i~~~~ 233 (314)
|..|.+.....+|.+||+|+.+..+.
T Consensus 3 k~~k~l~~vv~~F~icW~P~~i~~~~ 28 (33)
T 2ki9_A 3 RLAKTLGLVLAVLLICWFPVLALMAH 28 (33)
T ss_dssp SSSSHHHHHHHHHTTTSSHHHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHhHHHHHHHH
Confidence 34555666788999999999987544
No 21
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=95.64 E-value=0.0064 Score=32.81 Aligned_cols=21 Identities=14% Similarity=0.154 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHHHHHHHhhcC
Q 021325 92 ASFLWTTTIAFTLHRTVVQHK 112 (314)
Q Consensus 92 ~s~~~l~~ia~~~y~~i~~~~ 112 (314)
+|.+.++++|+|||.++++|.
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl 22 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAI 22 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhhhh
Confidence 678999999999999998764
No 22
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=92.73 E-value=0.0099 Score=37.83 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=28.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhhcccccc
Q 021325 17 ILTALNTGASSLSFVGSGFIVLCYCLFKELRKF 49 (314)
Q Consensus 17 ~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~ 49 (314)
.+++++.+++++|++||+++++++.+.|..+.+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~~~ 62 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHHHH 62 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSCSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccccc
Confidence 567889999999999999999999988876543
No 23
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=71.72 E-value=7.5 Score=34.42 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=23.5
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhhccccccchh
Q 021325 17 ILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSFK 52 (314)
Q Consensus 17 ~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~~ 52 (314)
....+..+..+++++|.+.-+++.....+.++..+.
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~ 68 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTP 68 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCST
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCc
Confidence 344445556677778888888888777665555543
No 24
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=65.74 E-value=29 Score=30.26 Aligned_cols=26 Identities=8% Similarity=-0.013 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccc
Q 021325 170 LWGAILYNGFTYFQVIRMLNNATRVA 195 (314)
Q Consensus 170 ~~~~~~~~~~~y~~i~~~~~~~~~~~ 195 (314)
+++++++..++|..+.+.++++.+..
T Consensus 211 ~~lP~~ii~~~y~~I~~~l~~~~~~~ 236 (447)
T 4eiy_A 211 VLVPLLLMLGVYLRIFLAARRQLADL 236 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 46788899999999999999876543
No 25
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=58.75 E-value=79 Score=27.41 Aligned_cols=26 Identities=23% Similarity=0.360 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021325 161 VHFITFYAPLWGAILYNGFTYFQVIR 186 (314)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~y~~i~~ 186 (314)
..+..+++|++++++.+..++..+.+
T Consensus 175 ~~~~~~~~p~~ii~~~y~~I~~~l~~ 200 (452)
T 3rze_A 175 TAIINFYLPTLLMLWFYAKIYKAVRQ 200 (452)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667788888888888888877654
No 26
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=57.59 E-value=36 Score=27.80 Aligned_cols=34 Identities=6% Similarity=-0.044 Sum_probs=22.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhhccccccch
Q 021325 18 LTALNTGASSLSFVGSGFIVLCYCLFKELRKFSF 51 (314)
Q Consensus 18 ~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~ 51 (314)
......+..+++++|...-+++.....+.++..+
T Consensus 11 ~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~ 44 (315)
T 4amj_A 11 EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQT 44 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcc
Confidence 3344445666777777777888887766555544
No 27
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=53.61 E-value=26 Score=31.04 Aligned_cols=33 Identities=9% Similarity=-0.156 Sum_probs=21.8
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhccccccch
Q 021325 19 TALNTGASSLSFVGSGFIVLCYCLFKELRKFSF 51 (314)
Q Consensus 19 ~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~ 51 (314)
.+...+..+++++|.+.-+++.....+.++..+
T Consensus 22 ~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~ 54 (488)
T 3eml_A 22 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQN 54 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCS
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhheeeccccCC
Confidence 344455666777777777777777766555554
No 28
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=48.02 E-value=55 Score=28.64 Aligned_cols=27 Identities=11% Similarity=0.012 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021325 161 VHFITFYAPLWGAILYNGFTYFQVIRM 187 (314)
Q Consensus 161 ~~~~~~~~p~~~~~~~~~~~y~~i~~~ 187 (314)
..+..+++|++++++.+..++..+.++
T Consensus 190 ~~~~~~~~p~~ii~~~y~~I~~~l~~~ 216 (467)
T 3uon_A 190 TAIAAFYLPVIIMTVLYWHISRASKSR 216 (467)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356677888888888888888777654
No 29
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=31.35 E-value=1.1e+02 Score=25.51 Aligned_cols=30 Identities=3% Similarity=-0.025 Sum_probs=21.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhccccccch
Q 021325 22 NTGASSLSFVGSGFIVLCYCLFKELRKFSF 51 (314)
Q Consensus 22 ~~~~~~isl~g~~lvi~~~~~~~~lr~~~~ 51 (314)
..+..+++++|.+.-+++.....+.++.++
T Consensus 36 ~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~ 65 (364)
T 2ks9_A 36 AAAYTVIVVTSVVGNVVVMWIILAHKRMRT 65 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 455667778888888888877777655554
No 30
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=29.02 E-value=34 Score=28.51 Aligned_cols=36 Identities=14% Similarity=0.061 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhccccccch
Q 021325 16 RILTALNTGASSLSFVGSGFIVLCYCLFKELRKFSF 51 (314)
Q Consensus 16 ~~~~~~~~~~~~isl~g~~lvi~~~~~~~~lr~~~~ 51 (314)
....+...+..+++++|.+.-+++.....+.++.++
T Consensus 36 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~ 71 (349)
T 1u19_A 36 WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRT 71 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcC
Confidence 334455556677888888888888888777665554
No 31
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=24.86 E-value=3.7e+02 Score=23.91 Aligned_cols=78 Identities=17% Similarity=0.083 Sum_probs=56.5
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC--chHHHHHHHHHhhhhhhHHHHHhhccchhHHHHHHHHHhhhhh
Q 021325 206 DMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGH--KIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAIHERLDLFWP 283 (314)
Q Consensus 206 ~~k~~~~~~~~~~~f~i~W~p~~i~~~~~~~~~~~--~~~~~~~l~~~l~~~~g~~n~iiy~~~~~~~~~~r~~~~~~~~ 283 (314)
++|.++.+..++++|++||+|+.+..++....+.. .......+...++.+++++||+||++.+ +++|+.+++.++
T Consensus 416 ~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~---~~fr~~~~~~~~ 492 (520)
T 3v2y_A 416 NVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTN---KEMRRAFIRIMG 492 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGGGTHHHHHHHHC---HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHH
Confidence 45566677778899999999999998887764421 2222334455689999999999999988 677777666554
Q ss_pred hhh
Q 021325 284 DRF 286 (314)
Q Consensus 284 ~~~ 286 (314)
.++
T Consensus 493 ~~~ 495 (520)
T 3v2y_A 493 RPL 495 (520)
T ss_dssp SCC
T ss_pred Hhc
Confidence 333
No 32
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=22.72 E-value=81 Score=24.74 Aligned_cols=61 Identities=10% Similarity=0.187 Sum_probs=36.1
Q ss_pred hhhhhhhhhhHhhHHHHHHHHHHHhcCCCCCCCCceeeecCCCCc--hHHHHHHHHHHHHHHHHHHH
Q 021325 115 VEDLEAMFHLYVWGTSLVVTVVRSFGNDHRHLGVWCWTQTGRTGK--AVHFITFYAPLWGAILYNGF 179 (314)
Q Consensus 115 ~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~ 179 (314)
+..+...|+=.+|+++..+.++-+.. .....||++..+... .+.-....+|..+++.+..+
T Consensus 104 PH~r~~~yIE~AW~fST~lGi~LFL~----evall~WVKF~~~~~~aa~~~t~vliPv~i~F~~Fa~ 166 (214)
T 4hkr_A 104 PHERLHWYIETAWAFSTLLGLILFLL----EIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAI 166 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHTTTCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhheEEeecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788899999987776655442 112348877554332 23334556787776654444
No 33
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=21.57 E-value=1.6e+02 Score=25.53 Aligned_cols=26 Identities=12% Similarity=-0.064 Sum_probs=12.6
Q ss_pred HhHHHHHHHHHHHHHHHhhccccccc
Q 021325 25 ASSLSFVGSGFIVLCYCLFKELRKFS 50 (314)
Q Consensus 25 ~~~isl~g~~lvi~~~~~~~~lr~~~ 50 (314)
..+++++|.+.-+++.....+.++.+
T Consensus 132 ~~~i~~~gi~gN~lvi~~i~~~~~l~ 157 (434)
T 4ea3_A 132 YLAVCVGGLLGNCLVMYVILRHTKMK 157 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred HHHHHHHHHHHHHHeeeeeeecCccC
Confidence 34444555555555555555444433
No 34
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=21.16 E-value=4.1e+02 Score=23.38 Aligned_cols=27 Identities=11% Similarity=-0.054 Sum_probs=15.4
Q ss_pred HHhHHHHHHHHHHHHHHHhhccccccc
Q 021325 24 GASSLSFVGSGFIVLCYCLFKELRKFS 50 (314)
Q Consensus 24 ~~~~isl~g~~lvi~~~~~~~~lr~~~ 50 (314)
+..++.++|.+.-+++.....+.++..
T Consensus 46 ~~~~i~~~gi~gN~lvi~~i~~~~~l~ 72 (500)
T 2rh1_A 46 VMSLIVLAIVFGNVLVITAIAKFERLQ 72 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 345555666666666666665544443
Done!