Query 021326
Match_columns 314
No_of_seqs 139 out of 253
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 16:02:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021326.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021326hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kr0_A Proteasomal ubiquitin r 100.0 9E-75 3.1E-79 566.8 28.0 276 11-286 22-392 (411)
2 2r2y_A Protein ADRM1; proteaso 100.0 5.4E-48 1.8E-52 332.9 14.6 115 11-125 21-136 (153)
3 4b4t_X 26S proteasome regulato 100.0 1.3E-43 4.6E-48 307.0 10.9 113 12-125 3-134 (156)
4 2kqz_A Proteasomal ubiquitin r 100.0 3.1E-31 1E-35 229.7 5.1 116 171-286 5-136 (155)
5 3pp2_A RHO GTPase-activating p 56.4 14 0.00046 29.1 4.6 54 66-121 69-123 (124)
6 2dn6_A KIAA0640 protein; PH do 52.4 39 0.0013 25.1 6.5 55 65-123 49-105 (115)
7 1klf_A FIMC chaperone, chapero 44.2 1.3E+02 0.0045 26.0 9.4 73 25-101 3-85 (205)
8 2xg5_A PAPD, chaperone protein 37.5 2.1E+02 0.007 24.9 9.8 73 25-101 3-88 (218)
9 2ec1_A Nucleoporin 50 kDa; ran 34.7 1.7E+02 0.0059 23.3 9.3 105 11-119 10-122 (125)
10 4djm_A DRAB; chaperone, PILI; 30.3 2.7E+02 0.0092 24.7 9.3 79 20-102 20-106 (239)
11 1upq_A PEPP1; PH domain, phosp 29.7 1.3E+02 0.0045 22.4 6.3 50 73-123 60-111 (123)
12 2kzb_A Autophagy-related prote 28.3 51 0.0018 26.1 3.6 53 30-90 4-58 (118)
13 2llw_A Heat shock protein STI1 24.4 35 0.0012 25.1 1.9 43 204-250 22-64 (71)
14 1pfj_A TFIIH basal transcripti 23.9 2E+02 0.007 22.7 6.5 56 38-100 22-78 (108)
15 4h8s_A DCC-interacting protein 23.4 1.9E+02 0.0065 27.0 7.4 51 72-123 350-400 (407)
16 1x1g_A Pleckstrin 2; PH domain 23.2 2.4E+02 0.0081 21.1 8.4 39 85-124 89-127 (129)
17 3cxb_B Pleckstrin homology dom 22.4 1.7E+02 0.0057 22.0 5.7 37 84-123 67-103 (112)
18 1xc0_A Pardaxin P-4, PA4; BEND 21.5 76 0.0026 19.5 2.6 23 231-253 6-28 (33)
19 2a2u_A Protein (alpha-2U-globu 20.8 2.7E+02 0.0093 22.2 7.0 29 95-123 132-160 (181)
20 1dro_A Beta-spectrin; cytoskel 20.8 92 0.0032 23.7 3.9 41 82-123 81-121 (122)
21 1v89_A Hypothetical protein KI 20.6 2.5E+02 0.0085 20.4 7.1 26 99-124 90-115 (118)
22 2dkp_A Pleckstrin homology dom 20.5 2.1E+02 0.0071 21.3 5.9 50 72-122 69-120 (128)
23 2aj7_A Hypothetical protein BH 20.1 76 0.0026 26.9 3.4 38 63-106 28-66 (163)
No 1
>2kr0_A Proteasomal ubiquitin receptor ADRM1; proteasome, 19S regulator, protein binding; NMR {Homo sapiens}
Probab=100.00 E-value=9e-75 Score=566.80 Aligned_cols=276 Identities=36% Similarity=0.642 Sum_probs=219.8
Q ss_pred CCCcceEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCCCccccceeeeCCceEEEEeec-CCCeEEEEE
Q 021326 11 AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILK 89 (314)
Q Consensus 11 ~~~~~lv~fkAGk~~~~g~~V~Pd~rKG~l~l~~~~d~l~hf~W~~R~~~~~edd~ii~Pgd~~f~~V~~-~tgRVy~Lk 89 (314)
.++++||+||||||+++|++|+||+|||+|||++.+|+|+||||++|+++.+|+|+||||+|++|+||++ +||||||||
T Consensus 22 s~~~~lveFkAGk~~~~g~~V~Pd~rKG~l~l~~~ed~l~hf~W~~R~~~~~Eddlii~P~d~~f~~V~~c~tGRVyvLk 101 (411)
T 2kr0_A 22 ASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLK 101 (411)
T ss_dssp SCCSCSEEECEEEEEESSSSEEECCSCEEEEEEECTTSCEEEEEEESSSCCEEEEEEECTTSEEEEECTTCSSSCEEEEE
T ss_pred CCCceeEEEeCceEEecCCEEeecCCCcEEEEEeCCCCcEEEEEecCCCCCcccceEEcCCceEEEECCCCCCCeEEEEE
Confidence 5569999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred EcCCCceeEEeccCCCChhhHHHHHHHHHHhcCCcccc---------------cccccccCCccccc-----cc------
Q 021326 90 FNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLVFV---------------NEEELDASVPLQVS-----ED------ 143 (314)
Q Consensus 90 F~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~~~~~~---------------~~~~~~~~~~~~~~-----~~------ 143 (314)
|+++++||||||||++.++|+++|++||++|++++... +.++....+...|+ +.
T Consensus 102 F~ss~~r~fFWmQe~~~~~D~~~~~~vN~ll~~~~~~~~~~~~gs~~~~~~~~g~e~dl~~~~~~~sq~qlmql~g~~g~ 181 (411)
T 2kr0_A 102 FKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGL 181 (411)
T ss_dssp ETTTCCEEEEEECCSCGGGHHHHHHHHHHHHHSCSCCSCSCCCSSCCCCSSCCCSCCCSCSCSSCCCSCCSSCCCCSSCC
T ss_pred ecCCCceeEEEecCCCcccHHHHHHHHHHHHhCCcccccccccCccccccccccccchhhhccccccHHHHHHhhhcccc
Confidence 99999999999999999999999999999999976522 00110000000000 00
Q ss_pred -------------c----ccCccccC-----CC--CC--------CCC----CCC---CC----------C---CCCCCC
Q 021326 144 -------------M----VEDDVSSR-----AG--NL--------VVP----NLG---GE----------A---ISDVTS 171 (314)
Q Consensus 144 -------------~----~~~~~ss~-----~~--~~--------~~~----~~~---~~----------~---~~~~~s 171 (314)
+ ......++ .+ .+ ..+ .|+ +. + ++..++
T Consensus 182 ~~~~gl~~~~gp~~~~~~~s~~~~~~~~s~~~~~~~~~~tp~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (411)
T 2kr0_A 182 GGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAAS 261 (411)
T ss_dssp CSTTCSCCCCCCSTTTTTCSCCCCSSSCCCCSCCCCCCCCTTSCCCCCCSCCCCCCCSSCCCSSCCCCSCCSSSSSTTTS
T ss_pred ccccccccccCcccccccccCCCccccccccccccccccccccccccccccccccccccccccccccccccccCCccccc
Confidence 0 00000000 00 00 000 000 00 0 011123
Q ss_pred CCCCcchHHHHHHHhhcCC-------CCCCcccCCCccchhHhhcCchHHHhhcCCCCCCC---CCHHHHHHHhcChhHH
Q 021326 172 SSGPVKLEDLQRIFSNIGP-------AGLGLGDILKPDLIMPLIETLPLEQRLAPYLPEGQ---WTPEELLELLQSPPFR 241 (314)
Q Consensus 172 ~~~~~~l~~lq~iL~~l~~-------~~~~L~dvLt~e~l~~lL~~~~~~~rL~~~LP~~~---~t~e~L~~~lrSPQFq 241 (314)
+.+++++++||+||++|+. +.++|++||++++|.+||++++++++|++|||+++ +++++|+++|||||||
T Consensus 262 ~~~~i~l~dLq~iLasl~~~~~~~~~~~v~L~dvLt~e~l~pll~d~e~~erL~~~LP~~~~~~~t~e~L~e~l~SPQF~ 341 (411)
T 2kr0_A 262 PTQPIQLSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQ 341 (411)
T ss_dssp CCCCSSHHHHHHHHHHHTSSSCTTCSHHHHGGGTSCHHHHHHHHTSHHHHHHHGGGCCSSCCCCCSHHHHTTSCCSHHHH
T ss_pred cCCcccHHHHHHHHHhhccccccccCCCCCHHHhhCHHHHHHHhcCHHHHHHHHhhCCCCcCcCCCHHHHHHHhcCHHHH
Confidence 3456899999999999963 24799999999999999999999999999999985 3899999999999999
Q ss_pred HHHHHHHHHHHcCccc--ccccCCCcccc----cccHHHHHHHHHHHhccc
Q 021326 242 QQVDSFTYVLKTGQID--LSQFGVDPSKY----KFTVLSFLEALEDSVSKL 286 (314)
Q Consensus 242 QAl~~fs~AL~sG~l~--l~qfGl~~~~~----~~~VeaFl~AI~~~~~k~ 286 (314)
|||++|++|||+|+|+ |+||||+.++. .++|++||+||++.++++
T Consensus 342 QaL~~fs~AL~sGqL~pll~qfgL~~~~~~aa~~G~VeaFl~al~~~~~~~ 392 (411)
T 2kr0_A 342 QALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFAKAMQNNAKPE 392 (411)
T ss_dssp HHHHHHHHHHHHTSSTHHHHHHTCCHHHHHHHHHTCHHHHHHHHHHTCSSS
T ss_pred HHHHHHHHHHhcCCchHHHHHhCCChhhhhhhccCCHHHHHHHHHHHhhcc
Confidence 9999999999999999 89999998753 349999999999999864
No 2
>2r2y_A Protein ADRM1; proteasome, ubiquitin, PH-domain, 19S regulator, receptor, U proteasome-degradation pathway; 1.70A {Mus musculus} PDB: 2z59_A
Probab=100.00 E-value=5.4e-48 Score=332.86 Aligned_cols=115 Identities=50% Similarity=0.941 Sum_probs=106.9
Q ss_pred CCCcceEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCCCccccceeeeCCceEEEEeec-CCCeEEEEE
Q 021326 11 AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILK 89 (314)
Q Consensus 11 ~~~~~lv~fkAGk~~~~g~~V~Pd~rKG~l~l~~~~d~l~hf~W~~R~~~~~edd~ii~Pgd~~f~~V~~-~tgRVy~Lk 89 (314)
.++++||+||||||.++|++|+||+|||+|||++.+|+|+||||++|+++.+|+|+||||+|++|++|++ +|||||+||
T Consensus 21 ~~~~~lveFkAGkm~l~g~~V~Pd~rKG~l~l~~~ed~l~hf~W~~R~t~~vEdDlIi~P~d~~F~kV~~c~tGRVyvLk 100 (153)
T 2r2y_A 21 SSTKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGTVEDDLIIFPDDCEFKRVPQCPSGRVYVLK 100 (153)
T ss_dssp ----CCEEEEEEEEEEETTEEEECCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECCTTSEEEEECTTCTTSCEEEEE
T ss_pred cCCceeEEEeCceEEecCCEEeECCCCEEEEEEECCCCcEEEEEecCCCCCccceEEEcCCCeEEEECCCCCCCeEEEEE
Confidence 6779999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred EcCCCceeEEeccCCCChhhHHHHHHHHHHhcCCcc
Q 021326 90 FNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLV 125 (314)
Q Consensus 90 F~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~~~~ 125 (314)
|++++++|||||||++.++|+++|++||++|++|++
T Consensus 101 F~ss~~r~FFWmQe~~~~~D~~~~~kvN~lL~~p~~ 136 (153)
T 2r2y_A 101 FKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNPPM 136 (153)
T ss_dssp ETTTCCEEEEEECSSSSTTHHHHHHHHHHHHHC---
T ss_pred ecCCCceEEEEecCCCcccHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999875
No 3
>4b4t_X 26S proteasome regulatory subunit RPN13; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} PDB: 2z4d_A
Probab=100.00 E-value=1.3e-43 Score=307.02 Aligned_cols=113 Identities=25% Similarity=0.558 Sum_probs=99.4
Q ss_pred CCcceEEEeceeeEecC--CceeecCCCcEEEEEeCCC---CceEEEEeeCCCCc----cccceeeeCCceEEEEeec-C
Q 021326 12 MQEILLEFRAGKMTFDG--KKVVPDSRKGLVRIARGEH---GLIHFQWLDRTRNV----VEDDQIVFPHEAVFEKVNQ-A 81 (314)
Q Consensus 12 ~~~~lv~fkAGk~~~~g--~~V~Pd~rKG~l~l~~~~d---~l~hf~W~~R~~~~----~edd~ii~Pgd~~f~~V~~-~ 81 (314)
++.+||+||||||.+++ ++|+|++|||+|||++++| ||+||||++|+++. +++|+||||||++|++|++ +
T Consensus 3 ~s~~li~FkAGk~~~~~~tk~v~Pd~rKG~i~l~~~~d~~~~l~hf~W~~R~~~~~~~~~~~dlii~P~d~~f~~v~~c~ 82 (156)
T 4b4t_X 3 MSSTVIKFRAGVCEYNEDSRLCTPIPVQGEIEIKPNEEEELGFWDFEWRPTEKPVGRELDPISLILIPGETMWVPIKSSK 82 (156)
T ss_dssp ----CEEECEEEEEEETTTTEEEECSCCCBEEEESCSSSSSCCCEEECBSCSCCSSCCCCCCEECCCTTTSEEECCSSCS
T ss_pred CCceeEEEeCceEEEcCCccEEeecCCceEEEEEECCCCCcceEEEEEecCCCCCcCCCCccceEEcCCceEEEEcCCCC
Confidence 46789999999999986 6899999999999999877 69999999998764 3459999999999999999 9
Q ss_pred CCeEEEEEEcCCCceeEEeccCCCC---------hhhHHHHHHHHHHhcCCcc
Q 021326 82 SGRVYILKFNTDDRKFFLWMQEPKA---------EEDSQLCNSVNYFINRPLV 125 (314)
Q Consensus 82 tgRVy~LkF~ss~~~~fFWmQe~~~---------~~D~~~~~kin~~l~~~~~ 125 (314)
|||||+||| +|++|||||||++++ ++|.++|++||++||++..
T Consensus 83 tGRVyvLkF-ss~~r~fFWmQe~~~~~~~~~~~s~kD~~~~~~vn~lL~~~~~ 134 (156)
T 4b4t_X 83 SGRIFALVF-SSNERYFFWLQEKNSGNLPLNELSAKDKEIYNKMIGVLNNSSE 134 (156)
T ss_dssp SCCEEEEEC-SSSCCEEEEECSSCSSSSSSCCCSSSSHHHHHHHHHHHHCC--
T ss_pred CcEEEEEEe-cCCCcEEEEeecCCccCCcccccchhHHHHHHHHHHHhcCCcc
Confidence 999999999 678999999999985 6799999999999999753
No 4
>2kqz_A Proteasomal ubiquitin receptor ADRM1; proteasome, UCH37-binding domain, protein binding; NMR {Homo sapiens} PDB: 2l5v_A
Probab=99.96 E-value=3.1e-31 Score=229.73 Aligned_cols=116 Identities=31% Similarity=0.619 Sum_probs=105.3
Q ss_pred CCCCCcchHHHHHHHhhcCC-------CCCCcccCCCccchhHhhcCchHHHhhcCCCCCCCC---CHHHHHHHhcChhH
Q 021326 171 SSSGPVKLEDLQRIFSNIGP-------AGLGLGDILKPDLIMPLIETLPLEQRLAPYLPEGQW---TPEELLELLQSPPF 240 (314)
Q Consensus 171 s~~~~~~l~~lq~iL~~l~~-------~~~~L~dvLt~e~l~~lL~~~~~~~rL~~~LP~~~~---t~e~L~~~lrSPQF 240 (314)
++++++++++||+||++|+. +.++|++||++++|.++|++++++++|++|||+++. ++++|+++||||||
T Consensus 5 ~~~~~i~l~~lq~il~sl~~~~~~~~~~~~~L~dvLt~e~l~~ll~d~~~~~~L~~~LP~~~~~~~~~e~L~~~l~SPQF 84 (155)
T 2kqz_A 5 SPTQPIQLSDLQSILATMNVPAGPAGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTSPQF 84 (155)
T ss_dssp CSCCCCSTTHHHHHHHHTCCCCCCCSSSHHHHHHHTCTTTSHHHHHSHHHHHHHHHHSCSSCCCCSSHHHHHSSCCSHHH
T ss_pred CCCCCccHHHHHHHHHHhccccccCCCCCCCHHHHhCHHHHHHHHcCHHHHHHHHhhCCCCCCCCCCHHHHHHHHcCHHH
Confidence 34567899999999999963 357999999999999999999999999999999964 99999999999999
Q ss_pred HHHHHHHHHHHHcCccc--ccccCCCcccc----cccHHHHHHHHHHHhccc
Q 021326 241 RQQVDSFTYVLKTGQID--LSQFGVDPSKY----KFTVLSFLEALEDSVSKL 286 (314)
Q Consensus 241 qQAl~~fs~AL~sG~l~--l~qfGl~~~~~----~~~VeaFl~AI~~~~~k~ 286 (314)
+|||++|++|||+|+++ ++||||++++. .++|++||+||++.+++.
T Consensus 85 ~Qal~~fs~AL~sG~l~~vl~qfgl~~~~~~~a~~g~Ve~Fl~al~~~~~~~ 136 (155)
T 2kqz_A 85 QQALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFAKAMQNNAKPE 136 (155)
T ss_dssp HHHHHHHHHHHHHTSSHHHHHHTTCCHHHHHHHHHTCHHHHHHHHHHHCSCS
T ss_pred HHHHHHHHHHHHhCCcHHHHHHcCCChhhhhhhccCCHHHHHHHHHHHHhcc
Confidence 99999999999999999 89999998764 248999999999999874
No 5
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=56.36 E-value=14 Score=29.12 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=32.4
Q ss_pred eeeeCCceEEEEee-cCCCeEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhc
Q 021326 66 QIVFPHEAVFEKVN-QASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFIN 121 (314)
Q Consensus 66 ~ii~Pgd~~f~~V~-~~tgRVy~LkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~ 121 (314)
.|-+.+ +...... ..+.|=++|+....+.+.| =+|-.+.+.=.+|+..|+..|+
T Consensus 69 ~i~L~~-a~v~~~~~d~~krk~vF~l~t~~~~~y-lfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 69 TVELRG-ATLSWAPKDKSSRKNVLELRSRDGSEY-LIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp EEECTT-CEEEECCGGGCSSSSEEEEECTTSCEE-EEECSCHHHHHHHHHHHHHHHC
T ss_pred eEEcCC-CEEEecccccCCCceEEEEECCCCCEE-EEECCCHHHHHHHHHHHHHHHh
Confidence 333344 5556653 3333434444434443333 3898888877899999999885
No 6
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.38 E-value=39 Score=25.06 Aligned_cols=55 Identities=11% Similarity=0.297 Sum_probs=33.8
Q ss_pred ceeeeCCceEEEEeecCCCe--EEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 021326 65 DQIVFPHEAVFEKVNQASGR--VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (314)
Q Consensus 65 d~ii~Pgd~~f~~V~~~tgR--Vy~LkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (314)
..|-+.+.+....++..+++ +|.|. ..++. |.|+-.+.+.=.+|+..|+.++...
T Consensus 49 g~i~L~~~~~v~~~~~~~~~~~~F~i~--~~~r~--~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 49 GDILLDENCCVESLPDKDGKKCLFLVK--CFDKT--FEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp EEECCCTTCEEEEECCCTTCCSEEEEE--CSSCE--EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cEEEecCcEEEEECCCCCCCeeEEEEE--eCCCE--EEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 34444454555555543444 55554 34554 4457777666679999999988754
No 7
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=44.19 E-value=1.3e+02 Score=25.98 Aligned_cols=73 Identities=18% Similarity=0.435 Sum_probs=44.3
Q ss_pred EecCCcee-ec-CCCcEEEEEeCCCC---ceEEEEeeCCCCccccceeeeCCceEEEEeecCCCeEEEEEE-cC----CC
Q 021326 25 TFDGKKVV-PD-SRKGLVRIARGEHG---LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILKF-NT----DD 94 (314)
Q Consensus 25 ~~~g~~V~-Pd-~rKG~l~l~~~~d~---l~hf~W~~R~~~~~edd~ii~Pgd~~f~~V~~~tgRVy~LkF-~s----s~ 94 (314)
.+++++|. +- .+-..|.|.-.++. |++ .|.+...+.....||+.|- +.||+...+.+..+.+ .. .+
T Consensus 3 ~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQ-sWi~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~~lP~D 78 (205)
T 1klf_A 3 ALGATRVIYPAGQKQVQLAVTNNDENSTYLIQ-SWVENADGVKDGRFIVTPP---LFAMKGKKENTLRILDATNNQLPQD 78 (205)
T ss_dssp EESCSEEEEETTCSEEEEEEEECCSSCCEEEE-EEEEETTSCCCSSEEEESS---EEEECSSEEEEEEEEECSCSCSCSS
T ss_pred EecceEEEEeCCCcEEEEEEEcCCCCCcEEEE-EEEecCCCCccCCEEEcCC---eEEECCCCceEEEEEecCCCCCCCC
Confidence 46666543 32 34445566554444 555 4987655545678999998 7788874444444444 32 25
Q ss_pred ceeEEec
Q 021326 95 RKFFLWM 101 (314)
Q Consensus 95 ~~~fFWm 101 (314)
+-..||+
T Consensus 79 rEslf~l 85 (205)
T 1klf_A 79 RESLFWM 85 (205)
T ss_dssp SCEEEEE
T ss_pred ceEEEEE
Confidence 6789997
No 8
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=37.48 E-value=2.1e+02 Score=24.93 Aligned_cols=73 Identities=14% Similarity=0.357 Sum_probs=43.1
Q ss_pred EecCCcee-e-cCCCcEEEEEeCCCC---ceEEEEeeCCCCc-c-ccceeeeCCceEEEEeecCCCeEEEEEEcC-----
Q 021326 25 TFDGKKVV-P-DSRKGLVRIARGEHG---LIHFQWLDRTRNV-V-EDDQIVFPHEAVFEKVNQASGRVYILKFNT----- 92 (314)
Q Consensus 25 ~~~g~~V~-P-d~rKG~l~l~~~~d~---l~hf~W~~R~~~~-~-edd~ii~Pgd~~f~~V~~~tgRVy~LkF~s----- 92 (314)
.+++++|. + +.+-..|.|.-.++. |++ .|.+...+. . ...||+.|- +.||+...+.+..+.+..
T Consensus 3 ~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQ-sWi~~~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~~~l 78 (218)
T 2xg5_A 3 SLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ-AWIENENQEKIITGPVIATPP---VQRLEPGAKSMVRLSTTPDISKL 78 (218)
T ss_dssp EESCSEEEEETTSSEEEEEEEECCSSSCEEEE-EEEECTTSCEECSSSEEEECS---EEEECTTCEEEEEEEECGGGGGS
T ss_pred EeCceEEEEeCCCCEEEEEEEcCCCCCcEEEE-EEEecCCCCccccCCEEEcCC---eEEECCCCceEEEEEecCCCCCC
Confidence 45665543 3 233445566554444 455 498765432 2 467999988 778887444455554443
Q ss_pred -CCceeEEec
Q 021326 93 -DDRKFFLWM 101 (314)
Q Consensus 93 -s~~~~fFWm 101 (314)
.++-..||+
T Consensus 79 P~DrESlf~l 88 (218)
T 2xg5_A 79 PQDRESLFYF 88 (218)
T ss_dssp CSSSCEEEEE
T ss_pred CCCceEEEEE
Confidence 357788996
No 9
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.70 E-value=1.7e+02 Score=23.27 Aligned_cols=105 Identities=8% Similarity=0.095 Sum_probs=57.6
Q ss_pred CCCcceEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCC-CccccceeeeCCceEEEEeecCCCeEEEEE
Q 021326 11 AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTR-NVVEDDQIVFPHEAVFEKVNQASGRVYILK 89 (314)
Q Consensus 11 ~~~~~lv~fkAGk~~~~g~~V~Pd~rKG~l~l~~~~d~l~hf~W~~R~~-~~~edd~ii~Pgd~~f~~V~~~tgRVy~Lk 89 (314)
-....|++.||=...+.++. --..--|.|+|.+..++-.++.=+...+ +.+=...+|.|+ ..+++. . ..++.++.
T Consensus 10 E~E~~lf~~raKLf~~~~~~-WkERGvG~lki~~~k~~k~RllmR~d~~~~kv~lN~~i~~~-m~~~~~-g-~~~~~~~~ 85 (125)
T 2ec1_A 10 KEEDAFYSKKCKLFYKKDNE-FKEKGIGTLHLKPTANQKTQLLVRADTNLGNILLNVLIPPN-MPCTRT-G-KNNVLIVC 85 (125)
T ss_dssp CCCSCSEEEEEEEEEECSSS-EEEEEEEEEEEEECSSSSEEEEEEESSSSCCBSCCEECCSS-CCEECC-T-TTEEEEEE
T ss_pred cCceeEEEEeeEEEEecCCC-cccccEEEEEeeecCCCcEEEEEEecCCCCEEEEeeEEcCC-CeEEec-C-CCcEEEEE
Confidence 45567888888444444321 1233457788877667777766665544 566778888876 455544 2 22344333
Q ss_pred EcC---CCc----eeEEeccCCCChhhHHHHHHHHHH
Q 021326 90 FNT---DDR----KFFLWMQEPKAEEDSQLCNSVNYF 119 (314)
Q Consensus 90 F~s---s~~----~~fFWmQe~~~~~D~~~~~kin~~ 119 (314)
... ++. ..-|=+.=++.+.=.++...|++.
T Consensus 86 ~~~~~~d~~~~~~~~~~~lrfk~~e~a~~f~~~~~e~ 122 (125)
T 2ec1_A 86 VPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEK 122 (125)
T ss_dssp CCSSCSCSSSSSSCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred ccCCcccCCCCCceEEEEEEECCHHHHHHHHHHHHHh
Confidence 321 111 333444445555555677776654
No 10
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=30.26 E-value=2.7e+02 Score=24.66 Aligned_cols=79 Identities=10% Similarity=0.142 Sum_probs=45.5
Q ss_pred eceeeEecCCce-eecC-CCcEEEEEeCCCC--ceEEEEeeCCCCccccceeeeCCceEEEEeecCCCeEEEEEEcC---
Q 021326 20 RAGKMTFDGKKV-VPDS-RKGLVRIARGEHG--LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILKFNT--- 92 (314)
Q Consensus 20 kAGk~~~~g~~V-~Pd~-rKG~l~l~~~~d~--l~hf~W~~R~~~~~edd~ii~Pgd~~f~~V~~~tgRVy~LkF~s--- 92 (314)
+|.=+.+++++| .|-. +-..|.|.-.++. |++ .|.+...+.....||+.|- +.|++...+.+..+.+..
T Consensus 20 ~aa~v~l~~TRvIy~~~~k~~sl~l~N~~~~P~LvQ-sWv~~~~~~~~~pfivtPP---lfRlep~~~q~lRIi~~~~~L 95 (239)
T 4djm_A 20 RVFSLHLGATRVVYNPASSGETLTVINDQDYPMLVQ-SEVLSEDQKSPAPFVVTPP---LFRLDGQQSSRLRIVRTGGEF 95 (239)
T ss_dssp CEECCEESCSEEEECTTSSCEEEEEEECSSSCEEEE-EEEECTTSSSBCSEEEESS---EEEECTTEEEEEEEEECSCCC
T ss_pred eEEeEEEcceEEEEeCCCCEEEEEEEeCCCCcEEEE-EEEEcCCCCccCCEEEcCC---eEEECCCCceEEEEEECCCCC
Confidence 344456788765 3333 3345566554332 344 4987654444567999988 778877333333333332
Q ss_pred -CCceeEEecc
Q 021326 93 -DDRKFFLWMQ 102 (314)
Q Consensus 93 -s~~~~fFWmQ 102 (314)
.+|-..||+=
T Consensus 96 P~DRESlf~ln 106 (239)
T 4djm_A 96 PPDRESLQWIC 106 (239)
T ss_dssp CSSSCEEEEEE
T ss_pred CCCceEEEEEE
Confidence 3577889974
No 11
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=29.65 E-value=1.3e+02 Score=22.36 Aligned_cols=50 Identities=6% Similarity=0.004 Sum_probs=31.4
Q ss_pred eEEEEeec--CCCeEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 021326 73 AVFEKVNQ--ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (314)
Q Consensus 73 ~~f~~V~~--~tgRVy~LkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (314)
++...+.. ..++-|+++....+.+. |.|+-.+.+.=.+|+..|+.++...
T Consensus 60 ~~v~~~~~~~~~~~~~~f~i~~~~~r~-~~l~a~s~~e~~~Wi~al~~a~~~~ 111 (123)
T 1upq_A 60 YNIRPDGPGAPRGRRFTFTAEHPGMRT-YVLAADTLEDLRGWLRALGRASRAE 111 (123)
T ss_dssp CEEEECCSSCTTSSSSEEEEECTTSCC-EEEECSSHHHHHHHHHHHHHHHC--
T ss_pred CEEEECCCCccCCCcEEEEEECCCCeE-EEEECCCHHHHHHHHHHHHHHHhcc
Confidence 45555543 45667777765544333 3477777766679999999998753
No 12
>2kzb_A Autophagy-related protein 19; selective autophagy, ATG19, alpha-mannosidase, protein trans; NMR {Saccharomyces cerevisiae}
Probab=28.31 E-value=51 Score=26.11 Aligned_cols=53 Identities=15% Similarity=0.258 Sum_probs=33.0
Q ss_pred ceee-cCCCcEEEEEeCCCCceEEEEeeCCCCccccceeeeCCceEEEEeec-CCCeEEEEEE
Q 021326 30 KVVP-DSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILKF 90 (314)
Q Consensus 30 ~V~P-d~rKG~l~l~~~~d~l~hf~W~~R~~~~~edd~ii~Pgd~~f~~V~~-~tgRVy~LkF 90 (314)
+|+| ..+-=.|.|.. .|.++||+-.+.+. +++||+|+|+.-.. .---|+..+.
T Consensus 4 ~~~~pn~~sL~Itvs~-rDnsL~F~lyNntn-------~~lpGnCtl~fs~~g~~ptv~si~m 58 (118)
T 2kzb_A 4 MVEPPNERSLQITMNQ-RDNSLYFQLFNNTN-------SVLAGNCKLKFTDAGDKPTTQIIDM 58 (118)
T ss_dssp -CCCSSCCCEEEEEEE-ETTEEEEEEEECSS-------SCCCSSCEECCCSSSSSCCCCCEEC
T ss_pred cccCCCCccEEEEEec-CCCeEEEEEecCCc-------eeccCccEEEEecCCCCceEEEEec
Confidence 4433 33444455554 68899999988765 35799999987554 2223555554
No 13
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=24.38 E-value=35 Score=25.05 Aligned_cols=43 Identities=14% Similarity=0.300 Sum_probs=27.8
Q ss_pred hhHhhcCchHHHhhcCCCCCCCCCHHHHHHHhcChhHHHHHHHHHHH
Q 021326 204 IMPLIETLPLEQRLAPYLPEGQWTPEELLELLQSPPFRQQVDSFTYV 250 (314)
Q Consensus 204 l~~lL~~~~~~~rL~~~LP~~~~t~e~L~~~lrSPQFqQAl~~fs~A 250 (314)
|..++.|+.++..|... ..++..+.+.+.+|.|++-+..|..|
T Consensus 22 i~~im~DP~~~~~lq~~----~~NP~~~~k~~~nP~v~~~i~kl~~a 64 (71)
T 2llw_A 22 VAAIMQDPVMQSILQQA----QQNPAALQEHMKNPEVFKKIQTLIAA 64 (71)
T ss_dssp HHHHHTCTHHHHHHHHH----HHCHHHHHHHHHSHHHHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHH----HHCHHHHHHHHhCHHHHHHHHHHHHc
Confidence 45566666655544331 22567788888888888888877554
No 14
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=23.93 E-value=2e+02 Score=22.73 Aligned_cols=56 Identities=5% Similarity=0.108 Sum_probs=31.1
Q ss_pred cEEEEEeCCCCceEEEEeeCCCCccccceeeeCCceEEEEeec-CCCeEEEEEEcCCCceeEEe
Q 021326 38 GLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILKFNTDDRKFFLW 100 (314)
Q Consensus 38 G~l~l~~~~d~l~hf~W~~R~~~~~edd~ii~Pgd~~f~~V~~-~tgRVy~LkF~ss~~~~fFW 100 (314)
|+|+|.. | |+.|.+...+ +-.+.+.-.+.+-.++.+ ..-+|-+=-|..++..|-|=
T Consensus 22 GtL~l~~--d---~i~W~p~~~~--~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~~~~~~F~ 78 (108)
T 1pfj_A 22 GALYLMA--E---RIAWAPEGKD--RFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFH 78 (108)
T ss_dssp CEEEEET--T---EEEEECSSSS--SCSEEEETTTCCCEEECCSSSSSCEEEEECSSSCEEEEE
T ss_pred ceEEEEc--c---eEEEccCCCC--CceEEEehhhhhcceeCCCCCccEEEEEEEeCCCceEEE
Confidence 9999986 3 9999996553 334443345555556655 44444443333333333333
No 15
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=23.40 E-value=1.9e+02 Score=27.01 Aligned_cols=51 Identities=16% Similarity=0.198 Sum_probs=32.3
Q ss_pred ceEEEEeecCCCeEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 021326 72 EAVFEKVNQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (314)
Q Consensus 72 d~~f~~V~~~tgRVy~LkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (314)
.+..+.++. .+|=|++...+.+++.-|.||-.+.+.=.+|+..|+.++...
T Consensus 350 ~~~v~~~~~-~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 350 NCSVMAVDC-EDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp CCEEEEECC-TTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred ceEEEECCC-CCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 344444444 345344444444443346789888877779999999998764
No 16
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=23.20 E-value=2.4e+02 Score=21.10 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=25.5
Q ss_pred EEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCCc
Q 021326 85 VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (314)
Q Consensus 85 Vy~LkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~~~ 124 (314)
-|+++....+++ -|.|+-.+.+.=.+|+..|+.+++.+.
T Consensus 89 ~~~F~I~~~~~r-~~~l~a~s~~e~~~Wi~al~~~~~~~~ 127 (129)
T 1x1g_A 89 GNLFKVITKDDT-HYYIQASSKAERAEWIEAIKKLTSGPS 127 (129)
T ss_dssp SSCEEECCTTCC-CEEECCSSHHHHHHHHHHHHHHSSSSC
T ss_pred CceEEEEcCCCC-EEEEEcCCHHHHHHHHHHHHHHHhccc
Confidence 344444333433 244777777666799999999998763
No 17
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=22.40 E-value=1.7e+02 Score=22.05 Aligned_cols=37 Identities=8% Similarity=0.136 Sum_probs=28.1
Q ss_pred eEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 021326 84 RVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (314)
Q Consensus 84 RVy~LkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (314)
.||.|++. +.+ -|.+|-.+.+.-.+|+..|+..+...
T Consensus 67 ~~F~l~~~-~~~--~y~f~A~s~ee~~~Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 67 HAFQVILS-DRP--CLELSAESEAEMAEWMQHLCQAVSKG 103 (112)
T ss_dssp TEEEEEET-TSC--CEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred eEEEEEcC-CCC--EEEEEcCCHHHHHHHHHHHHHHhhcc
Confidence 38888774 233 25589988888889999999998874
No 18
>1xc0_A Pardaxin P-4, PA4; BEND-helix-BEND-helix motif, signaling protein; NMR {Synthetic} SCOP: j.6.1.1 PDB: 2kns_A
Probab=21.51 E-value=76 Score=19.53 Aligned_cols=23 Identities=17% Similarity=0.426 Sum_probs=20.2
Q ss_pred HHHHhcChhHHHHHHHHHHHHHc
Q 021326 231 LLELLQSPPFRQQVDSFTYVLKT 253 (314)
Q Consensus 231 L~~~lrSPQFqQAl~~fs~AL~s 253 (314)
|-.+|.||-|.--++....||.+
T Consensus 6 ipkiissplfktllsavgsalss 28 (33)
T 1xc0_A 6 IPKIISSPLFKTLLSAVGSALSS 28 (33)
T ss_dssp HHHHTTTTTHHHHHHHHHHHTTT
T ss_pred hhHHHccHHHHHHHHHHHHHhhc
Confidence 45789999999999999999977
No 19
>2a2u_A Protein (alpha-2U-globulin); lipid binding protein; 2.50A {Rattus norvegicus} SCOP: b.60.1.1 PDB: 2a2g_A
Probab=20.81 E-value=2.7e+02 Score=22.19 Aligned_cols=29 Identities=3% Similarity=-0.026 Sum_probs=24.8
Q ss_pred ceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 021326 95 RKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (314)
Q Consensus 95 ~~~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (314)
.+.++|+..++.+.+++..+++.+++...
T Consensus 132 ~~~~~~llsR~~~~~~~~~~~f~~~~~~~ 160 (181)
T 2a2u_A 132 TFQLMVLYGRTKDLSSDIKEKFAKLCEAH 160 (181)
T ss_dssp EEEEEEEEESSSSCCHHHHHHHHHHHHTT
T ss_pred EEEEEEEEecCCCCCHHHHHHHHHHHHHc
Confidence 46889999999998899999999887654
No 20
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=20.80 E-value=92 Score=23.69 Aligned_cols=41 Identities=15% Similarity=0.185 Sum_probs=26.3
Q ss_pred CCeEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 021326 82 SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (314)
Q Consensus 82 tgRVy~LkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (314)
+.|-|+++....+.+. |.+|-.+.+.=.+|+..||..|+.+
T Consensus 81 ~kr~~~F~l~t~~~~~-~lfqA~s~~e~~~Wi~ai~~~i~~~ 121 (122)
T 1dro_A 81 TKKKHVLRVKLANGAL-FLLQAHDDTEMSQWVTSLKAQSDST 121 (122)
T ss_dssp SSSTTEEEEECSSSCE-EEEECSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCCeEEEEEEcCCCE-EEEECCCHHHHHHHHHHHHHHHHhc
Confidence 3443444443333232 3378888888889999999998763
No 21
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=20.60 E-value=2.5e+02 Score=20.36 Aligned_cols=26 Identities=4% Similarity=-0.059 Sum_probs=20.1
Q ss_pred EeccCCCChhhHHHHHHHHHHhcCCc
Q 021326 99 LWMQEPKAEEDSQLCNSVNYFINRPL 124 (314)
Q Consensus 99 FWmQe~~~~~D~~~~~kin~~l~~~~ 124 (314)
|.|+-.+.+.=.+|+..|+.++...+
T Consensus 90 ~~l~a~s~~e~~~Wi~al~~~~~~~~ 115 (118)
T 1v89_A 90 YVLMASSQAEMEEWVKFLRRVAGSGP 115 (118)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHCCS
T ss_pred EEEECCCHHHHHHHHHHHHHHHccCC
Confidence 45777777666799999999988654
No 22
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=20.50 E-value=2.1e+02 Score=21.34 Aligned_cols=50 Identities=8% Similarity=0.001 Sum_probs=29.8
Q ss_pred ceEEEEeec--CCCeEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcC
Q 021326 72 EAVFEKVNQ--ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (314)
Q Consensus 72 d~~f~~V~~--~tgRVy~LkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~l~~ 122 (314)
.+....+.. ..+|-|++.....+.+. |.|+-.+.+.=.+|+..|+.++..
T Consensus 69 ~~~v~~~~~~~~~~~~~~F~i~~~~~r~-~~l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 69 SFQIALLTSEDHINRKYAFKAAHPNMRT-YYFCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp GSEEEECCGGGCCSSCSEEEEECSSSCC-EEEECSSHHHHHHHHHHHHHHHSC
T ss_pred ceEEEEcCCcccCCCCeEEEEEcCCCCE-EEEEcCCHHHHHHHHHHHHHHHhc
Confidence 345555543 33554555554443233 347777776667999999887654
No 23
>2aj7_A Hypothetical protein BH3618; BH3618-like fold, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.67A {Bacillus halodurans} SCOP: b.158.1.1
Probab=20.09 E-value=76 Score=26.91 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=22.3
Q ss_pred ccceeeeCCceEEEEeec-CCCeEEEEEEcCCCceeEEeccCCCC
Q 021326 63 EDDQIVFPHEAVFEKVNQ-ASGRVYILKFNTDDRKFFLWMQEPKA 106 (314)
Q Consensus 63 edd~ii~Pgd~~f~~V~~-~tgRVy~LkF~ss~~~~fFWmQe~~~ 106 (314)
|+++|.||.- ++- .+=|=|+|-.. ....-|||||+-+.
T Consensus 28 e~~ii~F~~G-----IpGFE~~k~F~L~~~-~~~~pf~~LQS~dd 66 (163)
T 2aj7_A 28 EDRLIAFDQG-----IPAFEDEKEFVLLPF-AAGTPYYTLQSTKT 66 (163)
T ss_dssp GGGEEECTTC-----BTTBTTCCEEEEEES-STTSCEEEEEESSC
T ss_pred ccCEEEccCC-----CcCCccceEEEEEec-CCCCcEEEEEecCC
Confidence 4566666542 233 44455666553 34558999997654
Done!