Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>021328
MMNSYVVIRLLLLEVLSAIAFASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVL
TQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSM
AFPYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHL
RLRAEKSLKGQADLIVVCYGDTQSMKQPKQPRPESEVISELIDSVEKSGAKYTVLYVSDP
VRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGILVVSFCFCPFFYLQF
KNLQFDFFIFFSFN

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  021328
        (314 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2092875 - symbol:AT3G13410 "AT3G13410" species...   686  1.5e-67   1
TAIR|locus:4515102682 - symbol:AT1G55546 "AT1G55546" spec...   275  5.3e-24   1


>TAIR|locus:2092875 [details] [associations]
            symbol:AT3G13410 "AT3G13410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005783 "endoplasmic
            reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=RCA] [GO:0000902 "cell morphogenesis" evidence=RCA]
            [GO:0006816 "calcium ion transport" evidence=RCA] [GO:0007030
            "Golgi organization" evidence=RCA] [GO:0007033 "vacuole
            organization" evidence=RCA] [GO:0009651 "response to salt stress"
            evidence=RCA] [GO:0016049 "cell growth" evidence=RCA] [GO:0048193
            "Golgi vesicle transport" evidence=RCA] GO:GO:0005783 EMBL:CP002686
            EMBL:AY035027 EMBL:AY059100 EMBL:BT006188 EMBL:BT000749
            IPI:IPI00536719 RefSeq:NP_566456.3 UniGene:At.23723 PRIDE:Q93WB8
            EnsemblPlants:AT3G13410.1 GeneID:820541 KEGG:ath:AT3G13410
            TAIR:At3g13410 InParanoid:Q93WB8 OMA:QSHSERE PhylomeDB:Q93WB8
            ProtClustDB:CLSN2690908 ArrayExpress:Q93WB8 Genevestigator:Q93WB8
            Uniprot:Q93WB8
        Length = 321

 Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
 Identities = 147/286 (51%), Positives = 189/286 (66%)

Query:     7 VIRLLLLEVLSA--IAFASPSTVPAFLWSTHHQKISS--NNALNYQTLSPKDLAKAVLTQ 62
             V  L+ L V S   I  ASP+TVPAFLWS H Q  +   + A+NYQ +S KDL  +V TQ
Sbjct:     9 VALLVFLSVASLFEIGLASPNTVPAFLWSPHLQSANGELDEAVNYQVMSAKDLVGSVFTQ 68

Query:    63 GGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAF 122
             GGW++ LCS ++  Q VDVALVF+GREL SS +S  +++D ALV+TL   FT SNFS+AF
Sbjct:    69 GGWSNFLCSEKKLEQPVDVALVFIGRELLSSDVSSKRNSDPALVNTLNNLFTASNFSLAF 128

Query:   123 PYIVSAGEETMESSLFSEFTEACVDDFKVANVAFSESCTVEGENFLKLADLHSVHDHLRL 182
             PYI +  EE ME+ L S   EAC ++  V+N+ FS+SC VE     KL+DL S  DHL  
Sbjct:   129 PYIAAPEEERMENLLLSGLKEACPNNVGVSNIVFSDSCFVEDGTIQKLSDLQSFKDHLLA 188

Query:   183 RAEKSLKGQADLIVVCYGDTQSMKQPKQPRPESEVISELIDSVEKSGAKYTVLYVSDPVR 242
             R E   +G+ DL+V+C   ++S  Q  Q   E E   EL+ SVE+SG+KYT LYVSDP  
Sbjct:   189 RRETRKEGETDLVVLCSEGSESNSQAGQSHSERESFLELVSSVEQSGSKYTALYVSDPY- 247

Query:   243 SVQYPSHQELERFLAESVAGNKSAN-NTGCDEVCQFKSSLFEGILV 287
                Y S++ L+RFLAE+  GN +    TGCDE+C+FKSSL EGILV
Sbjct:   248 --WYTSYKTLQRFLAETAKGNSTPEIATGCDELCKFKSSLLEGILV 291


>TAIR|locus:4515102682 [details] [associations]
            symbol:AT1G55546 "AT1G55546" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 IPI:IPI00545489
            RefSeq:NP_001117500.1 UniGene:At.73824 EnsemblPlants:AT1G55546.1
            GeneID:6241390 KEGG:ath:AT1G55546 Uniprot:F4I1T8
        Length = 131

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 57/109 (52%), Positives = 75/109 (68%)

Query:     4 SYVVIRLLLLEVLSAIAF--ASPSTVPAFLWSTHHQKISSNNALNYQTLSPKDLAKAVLT 61
             +Y    L++LE  S + F  ASPSTVPAFLWS H Q  +    +NYQ +S KDL  +V T
Sbjct:    21 NYYQYLLVVLEFASLVDFGLASPSTVPAFLWSPHLQYANGETDVNYQVMSAKDLVDSVFT 80

Query:    62 QGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLK 110
              GGW++ LCS ++  Q VDVALVF+GREL SS +S N+++D  LV+TLK
Sbjct:    81 LGGWSNFLCSEKKLQQPVDVALVFIGRELLSSDVSSNQNSDPVLVNTLK 129


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.132   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      314       314   0.00081  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  211 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.41u 0.11s 26.52t   Elapsed:  00:00:01
  Total cpu time:  26.41u 0.11s 26.52t   Elapsed:  00:00:01
  Start:  Sat May 11 14:00:55 2013   End:  Sat May 11 14:00:56 2013

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