Query 021328
Match_columns 314
No_of_seqs 24 out of 26
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 16:03:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 48.1 35 0.0012 27.2 5.7 47 190-240 73-120 (200)
2 2lnd_A De novo designed protei 42.8 82 0.0028 25.5 7.0 59 168-242 32-90 (112)
3 3mil_A Isoamyl acetate-hydroly 38.4 1.1E+02 0.0038 24.4 7.3 42 190-231 71-115 (240)
4 3rfq_A Pterin-4-alpha-carbinol 37.3 68 0.0023 27.6 6.2 99 57-169 9-108 (185)
5 3dci_A Arylesterase; SGNH_hydr 31.6 1.9E+02 0.0064 23.7 7.8 82 141-229 55-140 (232)
6 1mld_A Malate dehydrogenase; o 30.4 66 0.0023 29.2 5.2 49 191-242 68-121 (314)
7 1smk_A Malate dehydrogenase, g 24.6 1.1E+02 0.0039 27.7 5.7 50 191-243 76-130 (326)
8 1gtz_A 3-dehydroquinate dehydr 24.3 1E+02 0.0035 26.8 5.0 48 171-235 31-78 (156)
9 1h05_A 3-dehydroquinate dehydr 23.5 95 0.0032 26.7 4.6 51 172-242 28-78 (146)
10 2r2o_A Plexin-B1; effector dom 22.7 29 0.00098 29.6 1.3 56 212-286 10-65 (138)
11 3lwz_A 3-dehydroquinate dehydr 22.3 1.3E+02 0.0044 26.0 5.3 52 171-242 32-83 (153)
12 3dhn_A NAD-dependent epimerase 22.2 2.3E+02 0.0078 22.7 6.6 46 191-239 67-112 (227)
13 1ivn_A Thioesterase I; hydrola 21.8 1.3E+02 0.0043 23.6 4.8 40 191-231 62-101 (190)
14 2hl0_A Threonyl-tRNA synthetas 21.2 59 0.002 27.9 2.9 42 193-242 38-82 (143)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=48.10 E-value=35 Score=27.25 Aligned_cols=47 Identities=15% Similarity=0.246 Sum_probs=32.7
Q ss_pred CCceEEEEecCCCccccCCCCCCcH-HHHHHHHHHHHHhcCCeEEEEEeecC
Q 021328 190 GQADLIVVCYGDTQSMKQPKQPRPE-SEVISELIDSVEKSGAKYTVLYVSDP 240 (314)
Q Consensus 190 g~TdlVV~C~~~~~~~k~~~~~~sE-gEvLselissve~sg~ky~vLYaSdP 240 (314)
.+.|+|||+- |...+.. +..| .+-|.+++..+++.+.+-.++.++=|
T Consensus 73 ~~pd~Vvi~~-G~ND~~~---~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~ 120 (200)
T 4h08_A 73 TKFDVIHFNN-GLHGFDY---TEEEYDKSFPKLIKIIRKYAPKAKLIWANTT 120 (200)
T ss_dssp SCCSEEEECC-CSSCTTS---CHHHHHHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCCCeEEEEe-eeCCCCC---CHHHHHHHHHHHHHHHhhhCCCccEEEeccC
Confidence 3689999998 5544422 2222 45688999999999987777777643
No 2
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=42.84 E-value=82 Score=25.48 Aligned_cols=59 Identities=20% Similarity=0.380 Sum_probs=42.0
Q ss_pred ccccchHhHHHHHHhhhhhcCCCCceEEEEecCCCccccCCCCCCcHHHHHHHHHHHHHhcCCeEEEEEeecCCC
Q 021328 168 LKLADLHSVHDHLRLRAEKSLKGQADLIVVCYGDTQSMKQPKQPRPESEVISELIDSVEKSGAKYTVLYVSDPVR 242 (314)
Q Consensus 168 kkl~~l~svqd~l~sr~~~~~~g~TdlVV~C~~~~~~~k~~~~~~sEgEvLselissve~sg~ky~vLYaSdP~~ 242 (314)
..-+.-+.|.|.+.+-|. + ..-+|||.++.+ |. =..|.+..-++-|+.|-||-..||--
T Consensus 32 rtatssqdirdiiksmkd---n-gkplvvfvngas---------qn---dvnefqneakkegvsydvlkstdpee 90 (112)
T 2lnd_A 32 RTATSSQDIRDIIKSMKD---N-GKPLVVFVNGAS---------QN---DVNEFQNEAKKEGVSYDVLKSTDPEE 90 (112)
T ss_dssp EEECSHHHHHHHHHHHTT---C-CSCEEEEECSCC---------HH---HHHHHHHHHHHHTCEEEEEECCCHHH
T ss_pred eeccchhhHHHHHHHHHh---c-CCeEEEEecCcc---------cc---cHHHHHHHHHhcCcchhhhccCCHHH
Confidence 333455678888887443 3 345888888444 22 24577888999999999999999965
No 3
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=38.38 E-value=1.1e+02 Score=24.44 Aligned_cols=42 Identities=5% Similarity=0.094 Sum_probs=26.7
Q ss_pred CCceEEEEecCCCccccC--CC-CCCcHHHHHHHHHHHHHhcCCe
Q 021328 190 GQADLIVVCYGDTQSMKQ--PK-QPRPESEVISELIDSVEKSGAK 231 (314)
Q Consensus 190 g~TdlVV~C~~~~~~~k~--~~-~~~sEgEvLselissve~sg~k 231 (314)
.+.|+|+++-+.-+.+.. .+ ....=.+-+.+++..+++.|++
T Consensus 71 ~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 115 (240)
T 3mil_A 71 SNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIR 115 (240)
T ss_dssp CCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 589999999944333221 11 1122245688899999999884
No 4
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=37.26 E-value=68 Score=27.64 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=44.6
Q ss_pred HHHHhccCccccccCCCCCCCCCcEEEEeeccccccccccCCCCCCHHHHHHHHhhhcccccceeeceeeecCC-cchhh
Q 021328 57 KAVLTQGGWADLLCSGRQSPQSVDVALVFVGRELQSSHISGNKHADLALVDTLKVSFTKSNFSMAFPYIVSAGE-ETMES 135 (314)
Q Consensus 57 ksVL~e~Gwsn~lcs~~~~~~~~D~al~FIG~eL~SsDiS~~k~sd~alvd~Lk~sf~~S~fSMAfPYVaaS~~-~~le~ 135 (314)
+.-|++.|.---.=+.++-.+++.++|+-+|+|+-.-. .+ ...+.+...|+ ..-+.... |....|+ +.|.+
T Consensus 9 ~~~~~~~g~~~~~~~~~~~~~~~rvaIistGdEl~~G~--~D-sn~~~L~~~L~----~~G~~v~~-~~iv~Dd~~~I~~ 80 (185)
T 3rfq_A 9 DAQLSDLGYSVAPMEQGAELVVGRALVVVVDDRTAHGD--ED-HSGPLVTELLT----EAGFVVDG-VVAVEADEVDIRN 80 (185)
T ss_dssp --------------------CCEEEEEEEECHHHHTTC--CC-SHHHHHHHHHH----HTTEEEEE-EEEECSCHHHHHH
T ss_pred hhhhhhhhhhhcccccccCCCCCEEEEEEECcccCCCC--cC-cHHHHHHHHHH----HCCCEEEE-EEEeCCCHHHHHH
Confidence 34456666655533344556789999999999996422 11 12234444444 34444332 2224554 45666
Q ss_pred hhhhhhHhhhcccCccceEEEecccccCCccccc
Q 021328 136 SLFSEFTEACVDDFKVANVAFSESCTVEGENFLK 169 (314)
Q Consensus 136 SLlsgf~e~c~~~~gi~~va~~~sCsv~~~d~kk 169 (314)
.|...+.+ +.+-|..+|-=+++..|+.+
T Consensus 81 al~~a~~~------~~DlVIttGGts~g~~D~t~ 108 (185)
T 3rfq_A 81 ALNTAVIG------GVDLVVSVGGTGVTPRDVTP 108 (185)
T ss_dssp HHHHHHHT------TCSEEEEESCCSSSTTCCHH
T ss_pred HHHHHHhC------CCCEEEECCCCCCCCcccHH
Confidence 65443322 34566666666666777765
No 5
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=31.63 E-value=1.9e+02 Score=23.70 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=42.0
Q ss_pred hHhhhcccCccceEEEecccccCCccccc--ccchHhHHHHHHhhhhhcCCCCceEEEEecCCCccccCCC--CCCcHHH
Q 021328 141 FTEACVDDFKVANVAFSESCTVEGENFLK--LADLHSVHDHLRLRAEKSLKGQADLIVVCYGDTQSMKQPK--QPRPESE 216 (314)
Q Consensus 141 f~e~c~~~~gi~~va~~~sCsv~~~d~kk--l~~l~svqd~l~sr~~~~~~g~TdlVV~C~~~~~~~k~~~--~~~sEgE 216 (314)
+++..+.+..+-|.+++|..+........ ...++-++..+... ...|+||++- |........ ....=.+
T Consensus 55 l~~~l~~~~~v~N~g~~G~t~~~~~~~~~~~~~~~~~l~~~l~~~------~p~d~VvI~~-GtND~~~~~~~~~~~~~~ 127 (232)
T 3dci_A 55 LEAELAGKAKVHPEGLGGRTTCYDDHAGPACRNGARALEVALSCH------MPLDLVIIML-GTNDIKPVHGGRAEAAVS 127 (232)
T ss_dssp HHHHHTTSEEEEEEECTTCBSSCCCCSSSSCCBHHHHHHHHHHHH------CSCSEEEEEC-CTTTTSGGGTSSHHHHHH
T ss_pred HHHHhCCCCeEEEcccCCccccccCcccccchhHHHHHHHHHhhC------CCCCEEEEEe-ccCCCccccCCCHHHHHH
Confidence 33333445567777777776642211100 01223333444331 1359999999 444443321 1112245
Q ss_pred HHHHHHHHHHhcC
Q 021328 217 VISELIDSVEKSG 229 (314)
Q Consensus 217 vLselissve~sg 229 (314)
-|.+++..+++.+
T Consensus 128 ~l~~li~~ir~~~ 140 (232)
T 3dci_A 128 GMRRLAQIVETFI 140 (232)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhc
Confidence 6888888888864
No 6
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=30.40 E-value=66 Score=29.17 Aligned_cols=49 Identities=18% Similarity=0.379 Sum_probs=37.3
Q ss_pred CceEEEEecCCCccccCCCCCCcHH-----HHHHHHHHHHHhcCCeEEEEEeecCCC
Q 021328 191 QADLIVVCYGDTQSMKQPKQPRPES-----EVISELIDSVEKSGAKYTVLYVSDPVR 242 (314)
Q Consensus 191 ~TdlVV~C~~~~~~~k~~~~~~sEg-----EvLselissve~sg~ky~vLYaSdP~~ 242 (314)
..|+||+|-+... ..++++.+- .++.++...+++.+-+-.++++|.|..
T Consensus 68 ~aDvVvi~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~ 121 (314)
T 1mld_A 68 GCDVVVIPAGVPR---KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121 (314)
T ss_dssp TCSEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHH
T ss_pred CCCEEEECCCcCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcc
Confidence 6899999974431 223333343 889999999999998889999999976
No 7
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=24.56 E-value=1.1e+02 Score=27.66 Aligned_cols=50 Identities=28% Similarity=0.445 Sum_probs=37.4
Q ss_pred CceEEEEecCCCccccCCCCCCcHH-----HHHHHHHHHHHhcCCeEEEEEeecCCCC
Q 021328 191 QADLIVVCYGDTQSMKQPKQPRPES-----EVISELIDSVEKSGAKYTVLYVSDPVRS 243 (314)
Q Consensus 191 ~TdlVV~C~~~~~~~k~~~~~~sEg-----EvLselissve~sg~ky~vLYaSdP~~s 243 (314)
..|+||+|-+... ..+.+..+- +++.++...+++.+.+-.++.+|.|...
T Consensus 76 gaDvVi~~ag~~~---~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~ 130 (326)
T 1smk_A 76 GMDLIIVPAGVPR---KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNS 130 (326)
T ss_dssp TCSEEEECCCCCC---CSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHH
T ss_pred CCCEEEEcCCcCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHH
Confidence 5899999984331 112333333 7899999999999999999999999764
No 8
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=24.28 E-value=1e+02 Score=26.76 Aligned_cols=48 Identities=17% Similarity=0.021 Sum_probs=33.6
Q ss_pred cchHhHHHHHHhhhhhcCCCCceEEEEecCCCccccCCCCCCcHHHHHHHHHHHHHhcCCeEEEE
Q 021328 171 ADLHSVHDHLRLRAEKSLKGQADLIVVCYGDTQSMKQPKQPRPESEVISELIDSVEKSGAKYTVL 235 (314)
Q Consensus 171 ~~l~svqd~l~sr~~~~~~g~TdlVV~C~~~~~~~k~~~~~~sEgEvLselissve~sg~ky~vL 235 (314)
.++++|++.+..+.+ +..+=|-|. |+..|||++..|+..-+. ...+++
T Consensus 31 ~Tl~di~~~l~~~a~-----~~g~~v~~~----------QSN~EGeLId~Ih~a~~~--~dgiII 78 (156)
T 1gtz_A 31 DTLADVEALCVKAAA-----AHGGTVDFR----------QSNHEGELVDWIHEARLN--HCGIVI 78 (156)
T ss_dssp CCHHHHHHHHHHHHH-----TTTCCEEEE----------ECSCHHHHHHHHHHHHHH--CSEEEE
T ss_pred CCHHHHHHHHHHHHH-----HcCCEEEEE----------eeCCHHHHHHHHHHhhhc--CcEEEE
Confidence 357788899988655 222334555 779999999999988664 455554
No 9
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=23.46 E-value=95 Score=26.68 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=35.6
Q ss_pred chHhHHHHHHhhhhhcCCCCceEEEEecCCCccccCCCCCCcHHHHHHHHHHHHHhcCCeEEEEEeecCCC
Q 021328 172 DLHSVHDHLRLRAEKSLKGQADLIVVCYGDTQSMKQPKQPRPESEVISELIDSVEKSGAKYTVLYVSDPVR 242 (314)
Q Consensus 172 ~l~svqd~l~sr~~~~~~g~TdlVV~C~~~~~~~k~~~~~~sEgEvLselissve~sg~ky~vLYaSdP~~ 242 (314)
++++|++.+..+.+ +..+=|-|. |+..|||++..|+..-++ ...+++ +|-.
T Consensus 28 tl~di~~~l~~~a~-----~~g~~~~~~----------QSN~EgeLId~Ih~a~~~--~dgiiI---NpgA 78 (146)
T 1h05_A 28 THDELVALIEREAA-----ELGLKAVVR----------QSDSEAQLLDWIHQAADA--AEPVIL---NAGG 78 (146)
T ss_dssp CHHHHHHHHHHHHH-----HTTCEEEEE----------ECSCHHHHHHHHHHHHHH--TCCEEE---ECGG
T ss_pred CHHHHHHHHHHHHH-----HcCCEEEEE----------eeCCHHHHHHHHHHhhhc--CcEEEE---Cchh
Confidence 57778899988655 223345555 779999999999998765 445554 4544
No 10
>2r2o_A Plexin-B1; effector domain, structural genomics, structural GEN consortium, SGC, glycoprotein, membrane, phosphorylation, R secreted, transmembrane; 2.00A {Homo sapiens} PDB: 2rex_A* 2jph_A
Probab=22.69 E-value=29 Score=29.65 Aligned_cols=56 Identities=16% Similarity=0.129 Sum_probs=25.5
Q ss_pred CcHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCChhHHHHHHhhhhcCCCCCCCCCCccchhhhhhhhhhhH
Q 021328 212 RPESEVISELIDSVEKSGAKYTVLYVSDPVRSVQYPSHQELERFLAESVAGNKSANNTGCDEVCQFKSSLFEGIL 286 (314)
Q Consensus 212 ~sEgEvLselissve~sg~ky~vLYaSdP~~s~~~ps~~~l~R~Lae~t~gn~~~~~t~CD~~Cq~KssLLEGil 286 (314)
-||-.+|-|-| ..+-..|++..|-... + ...-.=|++-=.||..+|.|.++|+++.
T Consensus 10 lsEdkLLRq~v------ey~~ltl~v~~~~~~~------------~-~~~~~i~VkVLdCDTItQvKeKiLDavY 65 (138)
T 2r2o_A 10 GRENLYFQGDV------EYRPLTLNALLAVGPG------------A-GEAQGVPVKVLDCDTISQAKEKMLDQLY 65 (138)
T ss_dssp ------------------CCEEEEEEEEC--------------------CCCEEEEEETTCBHHHHHHHHHHHHT
T ss_pred cChhHhhcccc------eeEEEEEEEEccCCcc------------c-ccCCceeEEEeccccHHHHHHHHHHHHH
Confidence 45666666543 4567788887654310 0 0001112222359999999999999874
No 11
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=22.28 E-value=1.3e+02 Score=26.04 Aligned_cols=52 Identities=15% Similarity=0.371 Sum_probs=35.6
Q ss_pred cchHhHHHHHHhhhhhcCCCCceEEEEecCCCccccCCCCCCcHHHHHHHHHHHHHhcCCeEEEEEeecCCC
Q 021328 171 ADLHSVHDHLRLRAEKSLKGQADLIVVCYGDTQSMKQPKQPRPESEVISELIDSVEKSGAKYTVLYVSDPVR 242 (314)
Q Consensus 171 ~~l~svqd~l~sr~~~~~~g~TdlVV~C~~~~~~~k~~~~~~sEgEvLselissve~sg~ky~vLYaSdP~~ 242 (314)
.++++|++.+..+.+ +..+=|-|. |+..|||++..|+..- .++..+++ +|-.
T Consensus 32 ~Tl~di~~~l~~~a~-----~~g~~~~~~----------QSN~EgeLId~Ih~a~--~~~dgiiI---NpgA 83 (153)
T 3lwz_A 32 TTLAEIVSQLEIQAQ-----GMDVALSHL----------QSNAEHALIDSIHQAR--GNTDFILI---NPAA 83 (153)
T ss_dssp CCHHHHHHHHHHHHH-----HTTEEEEEE----------ECSCHHHHHHHHHHHT--TTCSEEEE---ECGG
T ss_pred CCHHHHHHHHHHHHH-----HcCCEEEEE----------ecCCHHHHHHHHHHhh--hcCceEEE---cccc
Confidence 357778888888655 334556666 7799999999999863 33555554 4544
No 12
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.17 E-value=2.3e+02 Score=22.70 Aligned_cols=46 Identities=24% Similarity=0.372 Sum_probs=29.5
Q ss_pred CceEEEEecCCCccccCCCCCCcHHHHHHHHHHHHHhcCCeEEEEEeec
Q 021328 191 QADLIVVCYGDTQSMKQPKQPRPESEVISELIDSVEKSGAKYTVLYVSD 239 (314)
Q Consensus 191 ~TdlVV~C~~~~~~~k~~~~~~sEgEvLselissve~sg~ky~vLYaSd 239 (314)
+.|+||.|-+.. +...+..+...+-...++..+++.|+++ ++|+|-
T Consensus 67 ~~d~vi~~a~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~Ss 112 (227)
T 3dhn_A 67 GADAVISAFNPG--WNNPDIYDETIKVYLTIIDGVKKAGVNR-FLMVGG 112 (227)
T ss_dssp TCSEEEECCCC--------CCSHHHHHHHHHHHHHHHTTCSE-EEEECC
T ss_pred CCCEEEEeCcCC--CCChhHHHHHHHHHHHHHHHHHHhCCCE-EEEeCC
Confidence 479999998554 3333333445666788999999999886 456654
No 13
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=21.79 E-value=1.3e+02 Score=23.62 Aligned_cols=40 Identities=18% Similarity=0.422 Sum_probs=25.6
Q ss_pred CceEEEEecCCCccccCCCCCCcHHHHHHHHHHHHHhcCCe
Q 021328 191 QADLIVVCYGDTQSMKQPKQPRPESEVISELIDSVEKSGAK 231 (314)
Q Consensus 191 ~TdlVV~C~~~~~~~k~~~~~~sEgEvLselissve~sg~k 231 (314)
+.|+||++.+.-+.+.+. ..+.=.+-+.+++..+++.|++
T Consensus 62 ~pd~Vii~~G~ND~~~~~-~~~~~~~~l~~li~~~~~~~~~ 101 (190)
T 1ivn_A 62 QPRWVLVELGGNDGLRGF-QPQQTEQTLRQILQDVKAANAE 101 (190)
T ss_dssp CCSEEEEECCTTTTSSSC-CHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCEEEEEeeccccccCC-CHHHHHHHHHHHHHHHHHcCCC
Confidence 469999999444333221 1122245688899999988876
No 14
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=21.15 E-value=59 Score=27.88 Aligned_cols=42 Identities=17% Similarity=0.270 Sum_probs=30.2
Q ss_pred eEEEEecCCCccccCCCCCC---cHHHHHHHHHHHHHhcCCeEEEEEeecCCC
Q 021328 193 DLIVVCYGDTQSMKQPKQPR---PESEVISELIDSVEKSGAKYTVLYVSDPVR 242 (314)
Q Consensus 193 dlVV~C~~~~~~~k~~~~~~---sEgEvLselissve~sg~ky~vLYaSdP~~ 242 (314)
=||+|+. .+.-|... --.....+|....++-|++.+||| ||.
T Consensus 38 aLVvF~~-----VE~~De~~~~~vv~~av~eI~~~a~kv~~~~ivlY---PyA 82 (143)
T 2hl0_A 38 VLVAFIS-----VEKVDEKNPEEVSLKAIEEISKVAEQVKAENVFVY---PFA 82 (143)
T ss_dssp EEEEEEE-----CBGGGGGCHHHHHHHHHHHHHHHHHHHTCCEEEEE---ECG
T ss_pred eEEEEEE-----EccCCcCCHHHHHHHHHHHHHHHHHhcCCCEEEEe---ccc
Confidence 3788888 33333322 334567889999999999999999 666
Done!