Your job contains 1 sequence.
>021331
MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD
YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCES
RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQVT
QLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPK
EFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFS
TDDMILGKKLVLQA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021331
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2203028 - symbol:CRB "chloroplast RNA binding"... 1516 1.7e-155 1
TAIR|locus:2099222 - symbol:CSP41A "AT3G63140" species:37... 490 8.8e-47 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 130 7.2e-06 2
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 125 2.6e-05 1
TAIR|locus:2025192 - symbol:AT1G75280 species:3702 "Arabi... 120 9.4e-05 1
TAIR|locus:2025197 - symbol:AT1G75290 species:3702 "Arabi... 119 0.00013 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 117 0.00028 1
UNIPROTKB|Q81JK7 - symbol:BA_5697 "Uncharacterized protei... 115 0.00031 1
TIGR_CMR|BA_5697 - symbol:BA_5697 "conserved hypothetical... 115 0.00031 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 100 0.00049 2
UNIPROTKB|Q71YS4 - symbol:LMOf2365_1769 "Putative unchara... 113 0.00051 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 100 0.00065 2
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 117 0.00070 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 100 0.00076 2
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 100 0.00076 2
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 100 0.00076 2
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 100 0.00076 2
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 100 0.00076 2
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 100 0.00077 2
>TAIR|locus:2203028 [details] [associations]
symbol:CRB "chloroplast RNA binding" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0010319 "stromule" evidence=IDA] [GO:0042631 "cellular response
to water deprivation" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP;RCA] [GO:0042742 "defense response to bacterium"
evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA] [GO:0007623
"circadian rhythm" evidence=IEP;IMP] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA]
[GO:0005840 "ribosome" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=IGI;RCA] [GO:0048046 "apoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0032544 "plastid translation"
evidence=IMP] [GO:0045727 "positive regulation of translation"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA;IMP] [GO:0005996 "monosaccharide
metabolic process" evidence=IMP] [GO:0010297 "heteropolysaccharide
binding" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0006636 "unsaturated fatty
acid biosynthetic process" evidence=RCA] [GO:0009595 "detection of
biotic stimulus" evidence=RCA] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0010218 "response to
far red light" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA] [GO:0016117
"carotenoid biosynthetic process" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0043085 "positive regulation of
catalytic activity" evidence=RCA] [GO:0043900 "regulation of
multi-organism process" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005773 GO:GO:0045893
GO:GO:0009611 GO:GO:0005777 GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0007623
GO:GO:0000272 GO:GO:0009409 GO:GO:0042742 GO:GO:0009941
GO:GO:0009658 GO:GO:0003723 GO:GO:0005840 GO:GO:0010287
GO:GO:0045727 GO:GO:0019843 GO:GO:0010319 GO:GO:0042631
GO:GO:0006364 HOGENOM:HOG000232785 ProtClustDB:PLN00016
GO:GO:0032544 EMBL:Y10557 EMBL:Y15382 EMBL:AC006416 EMBL:AY070022
EMBL:AF428282 EMBL:AY035050 EMBL:AF325043 EMBL:AY062570
EMBL:AY087609 IPI:IPI00548101 PIR:E86226 PIR:T51863 PIR:T52072
RefSeq:NP_172405.1 UniGene:At.21708 UniGene:At.50307
ProteinModelPortal:Q9SA52 SMR:Q9SA52 STRING:Q9SA52 PaxDb:Q9SA52
PRIDE:Q9SA52 ProMEX:Q9SA52 EnsemblPlants:AT1G09340.1 GeneID:837455
KEGG:ath:AT1G09340 TAIR:At1g09340 InParanoid:Q9SA52 OMA:PTYIYGP
PhylomeDB:Q9SA52 Genevestigator:Q9SA52 GO:GO:0010297 GO:GO:0005996
Uniprot:Q9SA52
Length = 378
Score = 1516 (538.7 bits), Expect = 1.7e-155, P = 1.7e-155
Identities = 281/320 (87%), Positives = 305/320 (95%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
MGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQ+FA+FSSKILHLKGDRKD
Sbjct: 59 MGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKD 118
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHCE- 119
YDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQ+IYCSSAGVYLKSD+LPHCE
Sbjct: 119 YDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEE 178
Query: 120 ------SRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP 173
SRHKGKL TES+L+SKGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P
Sbjct: 179 DAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVP 238
Query: 174 GSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
SGIQ++QLGHVKDLA AF+ VLGNEKASR++FNISGEKYVTFDGLA+ACAKA GFPEPE
Sbjct: 239 NSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPE 298
Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
+VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGL DSYNLDFGRGT+
Sbjct: 299 IVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTF 358
Query: 294 RKEADFSTDDMILGKKLVLQ 313
RKEADF+TDDMIL KKLVLQ
Sbjct: 359 RKEADFTTDDMILSKKLVLQ 378
>TAIR|locus:2099222 [details] [associations]
symbol:CSP41A "AT3G63140" species:3702 "Arabidopsis
thaliana" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IGI;RCA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032544 "plastid translation" evidence=IMP]
[GO:0045727 "positive regulation of translation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IMP] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009637
"response to blue light" evidence=RCA] [GO:0009657 "plastid
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0015979
"photosynthesis" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019684 "photosynthesis,
light reaction" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] InterPro:IPR016040 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0008266
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
GO:GO:0007623 GO:GO:0009941 GO:GO:0009658 GO:GO:0005840
GO:GO:0009534 GO:GO:0010287 GO:GO:0045727 GO:GO:0019843
GO:GO:0010319 GO:GO:0006364 EMBL:AL163816 EMBL:AF428269
EMBL:AY059887 EMBL:AY128804 IPI:IPI00516646 PIR:T48103
RefSeq:NP_191873.1 UniGene:At.48804 UniGene:At.5159
ProteinModelPortal:Q9LYA9 SMR:Q9LYA9 STRING:Q9LYA9 PaxDb:Q9LYA9
PRIDE:Q9LYA9 ProMEX:Q9LYA9 EnsemblPlants:AT3G63140.1 GeneID:825489
KEGG:ath:AT3G63140 TAIR:At3g63140 HOGENOM:HOG000232785
InParanoid:Q9LYA9 OMA:EYVKIGR PhylomeDB:Q9LYA9 ProtClustDB:PLN00016
Genevestigator:Q9LYA9 GO:GO:0032544 Uniprot:Q9LYA9
Length = 406
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 114/313 (36%), Positives = 168/313 (53%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEF-SSKILHLKGDRKD 60
GG IG + ++ L+ GH VT+ T G ++++ F+E S + G+ +
Sbjct: 90 GGHAVIGFYFAKELLSAGHAVTILTVGDES-SEKMKKPPFNRFSEIVSGGGKTVWGNPAN 148
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPN--LEQFIYCSSAGVYLKSDLLPHC 118
V + + + FDVV D NG++ D V P++D + ++QF++ SSAG+Y ++ PH
Sbjct: 149 ---VANVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHV 205
Query: 119 ES----RHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 174
E G + E L NW S RP Y+ G N EEWFF R+ R +PIPG
Sbjct: 206 EGDAVKADAGHVVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPG 265
Query: 175 SGIQVTQLGHVKDLARAFVQVLGN-EKASRQVFNISGEKYVTFDGLARACAKAAGFPEPE 233
SG+Q+T + HV+DL+ + N E AS +FN ++ VT DG+A+ CA AAG E
Sbjct: 266 SGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVE 324
Query: 234 LVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTY 293
+VHY+PK KKAF FR+ HF+A AK +LGW+ + +L E L + + G
Sbjct: 325 IVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRD 384
Query: 294 RKEADFSTDDMIL 306
+KE F DD IL
Sbjct: 385 KKEIKFELDDKIL 397
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 130 (50.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 46/173 (26%), Positives = 74/173 (42%)
Query: 116 PHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPG 174
P+ S+ L + E+ G+ + R YGP + + H + AG+P+P+ G
Sbjct: 162 PYSASKAGSDLLVRAYNETFGLPVLTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYG 221
Query: 175 SGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGE-KYVTFDGLARACA---KAAGFP 230
G V HVKD + A VL K +VFN+ G ++ D + C + G P
Sbjct: 222 DGRNVRDWLHVKDHSTAIETVLKGGKPG-EVFNVGGNNEWFNIDIVHLLCDLLDERLGRP 280
Query: 231 EPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADS 283
E + F K + D+ + S K K LGW+P + G+A++
Sbjct: 281 GGE----SRGLITFVKDRLG--HDRRYAISAAKIKRELGWEPSYTFERGIAET 327
Score = 39 (18.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 54 LKGDRKDYDFVKSSLSAKGFDVV 76
+KGD D D V+ L+ + D V
Sbjct: 63 VKGDIGDADLVRRILAEERIDAV 85
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 78/314 (24%), Positives = 128/314 (40%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVT-L--FTRGKAPIAQQLPGESDQEF--AEFSSKILH--L 54
G FIG L L+ +GH V L F G+A + L S F A+ + LH L
Sbjct: 7 GAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADLHAIL 66
Query: 55 KGDRKDYDF-------VKSSLSAKGFDVVYDING--READEVEPILDALPNLEQFIYCSS 105
+ R + F V+ S++ FD ++ G R A+ + + ++ SS
Sbjct: 67 EQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQT-----GVRKIVHTSS 121
Query: 106 AG-VY-----------LKSD-LLPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLN 152
G +Y +D P+ + G++ + G++ + + P +YGP
Sbjct: 122 GGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGP-R 180
Query: 153 YNP-----VEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFN 207
+P V F L +G+P + G G V D+ AFV+V + + FN
Sbjct: 181 QDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGGGLR-FN 239
Query: 208 ISGEKYVTFDGLARACAKAAGFPE-PELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKH 266
I K + L A A A G P+ PE + P+ D K+ + A+
Sbjct: 240 IGTGKETSDRQLHSAVAAAVGGPDDPEF--HPPRLGDL-KRSCL---------DIGLAER 287
Query: 267 VLGWKPEFDLVEGL 280
VLGW+P+ +L +G+
Sbjct: 288 VLGWRPQIELADGV 301
>TAIR|locus:2025192 [details] [associations]
symbol:AT1G75280 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=IGI;IEP]
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005737 GO:GO:0046686 GO:GO:0006979
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491 EMBL:AC025814
EMBL:Z49777 EMBL:AY065395 EMBL:AY117175 EMBL:AY084851
IPI:IPI00517618 PIR:C96783 PIR:S57613 RefSeq:NP_565107.1
UniGene:At.18297 ProteinModelPortal:P52577 SMR:P52577 STRING:P52577
PaxDb:P52577 PRIDE:P52577 ProMEX:P52577 EnsemblPlants:AT1G75280.1
GeneID:843865 KEGG:ath:AT1G75280 TAIR:At1g75280 eggNOG:NOG126691
HOGENOM:HOG000237415 InParanoid:P52577 KO:K00224 OMA:VLSINHA
PhylomeDB:P52577 ProtClustDB:CLSN2682501 Genevestigator:P52577
GermOnline:AT1G75280 InterPro:IPR008030 Pfam:PF05368 Uniprot:P52577
Length = 310
Score = 120 (47.3 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 40/146 (27%), Positives = 74/146 (50%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT +IG FL K GH R +A ++ + G++ Q F + ILH GD D
Sbjct: 11 IGGTGYIGKFLVEASAKAGHSTFALVR-EATLSDPVKGKTVQSFKDLGVTILH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYL-KSDL 114
++ + ++ K DVV G + D+ + I+ A+ N+++F+ S GV + ++
Sbjct: 68 HESLVKAI--KQVDVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGVDVDRTSA 123
Query: 115 LPHCESRHKGKLNTESVLESKGVNWT 140
+ +S GK+ +E++G+ +T
Sbjct: 124 VEPAKSAFAGKIQIRRTIEAEGIPYT 149
>TAIR|locus:2025197 [details] [associations]
symbol:AT1G75290 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016651 "oxidoreductase activity,
acting on NAD(P)H" evidence=ISS] InterPro:IPR016040 EMBL:CP002684
GO:GO:0000166 Gene3D:3.40.50.720 eggNOG:COG0702
ProtClustDB:CLSN2682501 InterPro:IPR008030 Pfam:PF05368
EMBL:BT033106 IPI:IPI00521965 RefSeq:NP_177664.4 UniGene:At.52521
ProteinModelPortal:B3LFB7 SMR:B3LFB7 PaxDb:B3LFB7 PRIDE:B3LFB7
EnsemblPlants:AT1G75290.1 GeneID:843866 KEGG:ath:AT1G75290
TAIR:At1g75290 OMA:IDEYLSY PhylomeDB:B3LFB7 ArrayExpress:B3LFB7
Genevestigator:B3LFB7 Uniprot:B3LFB7
Length = 318
Score = 119 (46.9 bits), Expect = 0.00013, P = 0.00013
Identities = 53/192 (27%), Positives = 91/192 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGT IG + VK GH R +A ++ G++ Q F +F +LH GD D
Sbjct: 11 IGGTGHIGKLIIEASVKAGHSTLALVR-EASLSDPNKGKTVQNFKDFGVTLLH--GDLND 67
Query: 61 YDFVKSSLSAKGFDVVYDING--READEVEPILDALP---NLEQFIYCSSAGVYL-KSDL 114
++ + ++ K DVV G + D+ + I+ A+ N+++F+ S G+ + KS
Sbjct: 68 HESLVKAI--KQADVVISTVGSMQILDQTK-IISAIKEAGNVKRFLP-SEFGMDVDKSSA 123
Query: 115 LPHCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 174
+ +S KL T +E++G+ +T L Y G Y P +L+ G P P
Sbjct: 124 VEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAG--YYLPT----LVQLEPGLTSP-PR 176
Query: 175 SGIQVTQLGHVK 186
+++ G+VK
Sbjct: 177 DKVKIFGDGNVK 188
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 54/200 (27%), Positives = 83/200 (41%)
Query: 96 NLEQFIYCSSAGVYLKS------DLLPHCESRH--KGKLNTESVLESKGVNW----TSLR 143
N+E+F+Y S+ VY S + P C + K E ++S + R
Sbjct: 138 NVEKFVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITR 197
Query: 144 PVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKAS 202
+YGP Y V F L+ R I GSG+Q + D+ AF+ VL K
Sbjct: 198 SSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKPG 257
Query: 203 RQVFNISGEKYVTFDGLARACAKAAG--FPEPELVHYNPKEFDFGKKKAFPFRDQHFFAS 260
+++NI ++ LA+ E E+ H+ D+ K + P D + S
Sbjct: 258 -EIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHW----MDYVKDR--PTNDLRYPMS 310
Query: 261 VEKAKHVLGWKPEFDLVEGL 280
EK H LGW+P+ EG+
Sbjct: 311 SEKM-HNLGWRPKVPWKEGI 329
>UNIPROTKB|Q81JK7 [details] [associations]
symbol:BA_5697 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
RefSeq:NP_847843.1 RefSeq:YP_022381.1 ProteinModelPortal:Q81JK7
DNASU:1085440 EnsemblBacteria:EBBACT00000011484
EnsemblBacteria:EBBACT00000015136 GeneID:1085440 GeneID:2817090
KEGG:ban:BA_5697 KEGG:bar:GBAA_5697 PATRIC:18789026
BioCyc:BANT261594:GJ7F-5550-MONOMER Uniprot:Q81JK7
Length = 292
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
>TIGR_CMR|BA_5697 [details] [associations]
symbol:BA_5697 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
RefSeq:NP_847843.1 RefSeq:YP_022381.1 ProteinModelPortal:Q81JK7
DNASU:1085440 EnsemblBacteria:EBBACT00000011484
EnsemblBacteria:EBBACT00000015136 GeneID:1085440 GeneID:2817090
KEGG:ban:BA_5697 KEGG:bar:GBAA_5697 PATRIC:18789026
BioCyc:BANT261594:GJ7F-5550-MONOMER Uniprot:Q81JK7
Length = 292
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 1 MGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKD 60
+GGTRF G L L+K+GH VT+ TRG I + F + L DR+D
Sbjct: 9 LGGTRFFGKHLVEALLKDGHDVTIATRG---ITED----------SFGGTVKRLIVDRED 55
Query: 61 YDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNL-EQFIYCSSAGVY 109
+ S L K +D+VYD ++ + + + L ++I SS VY
Sbjct: 56 EKQLASCLEGKSYDIVYDNLCYSSNAAKIVCEFLKGTTNKYIMTSSMAVY 105
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 100 (40.3 bits), Expect = 0.00050, Sum P(2) = 0.00049
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
++ +GV R +GP +N V F + G P+ + GSG Q +V DL
Sbjct: 189 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 248
Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
V ++ N S V N+ + T A+ G E+ + + D K+K
Sbjct: 249 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK 305
Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
P ++KAK +LGW+P L EGL + + +RKE ++ ++ + K
Sbjct: 306 --P--------DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 349
Score = 55 (24.4 bits), Expect = 0.00050, Sum P(2) = 0.00049
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL 24
GG F+G L+ L+ +GH+VT+
Sbjct: 38 GGAGFVGSHLTDKLMMDGHEVTV 60
>UNIPROTKB|Q71YS4 [details] [associations]
symbol:LMOf2365_1769 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AE017262 GenomeReviews:AE017262_GR
RefSeq:YP_014363.1 ProteinModelPortal:Q71YS4 STRING:Q71YS4
GeneID:2799575 KEGG:lmf:LMOf2365_1769 PATRIC:20324823
HOGENOM:HOG000032124 OMA:RNDFNYG ProtClustDB:CLSK895017
Uniprot:Q71YS4
Length = 291
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQEFAEFSSKILHLKGDRKDY 61
GGTRF G L LV EGH+VT+ TRGK ++ F + +++ L + +D
Sbjct: 7 GGTRFFGKKLVERLVSEGHEVTIGTRGK----------TEDNFGDTVKRVI-LNRESRDA 55
Query: 62 DFVKSSLSAKGFDVVYDINGREADEVEPILDALPN-LEQFIYCSSAGVY 109
F L+ + +DV+YD E +DA ++++IY SS VY
Sbjct: 56 LF---QLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVY 101
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 100 (40.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
++ +GV R +GP +N V F + G P+ + GSG Q +V DL
Sbjct: 223 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 282
Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
V ++ N S V N+ + T A+ G E+ + + D K+K
Sbjct: 283 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK 339
Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
P ++KAK +LGW+P L EGL + + +RKE ++ ++ + K
Sbjct: 340 --P--------DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 383
Score = 55 (24.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL 24
GG F+G L+ L+ +GH+VT+
Sbjct: 72 GGAGFVGSHLTDKLMMDGHEVTV 94
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 104 SSAGVYLKSDLLP---HCESRHKGKLNTESVLESKGVNWTSLRPVYIYGPLNY-NPVEEW 159
++ G + S LLP + ++ ++ + S G+ + R +YGP + +
Sbjct: 145 AAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKMIPK 204
Query: 160 FFHRLKAGRPIPIPGSGIQVTQLGHVKDLARAFVQVLGNEKASRQVFNISGEKYVTFDGL 219
F +G+P+PI G G V + +D+A AF VL + V+N+ ++ +
Sbjct: 205 FILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEIGH-VYNVGTKRERRVIDV 263
Query: 220 ARACAKAAGFPEPELVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEG 279
AR K G +PE F + + PF DQ +F +K K LGW+ + +G
Sbjct: 264 ARDICKLFG-KDPE------SSIQFVENR--PFNDQRYFLDDQKLKK-LGWQERTNWEDG 313
Query: 280 L 280
L
Sbjct: 314 L 314
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 100 (40.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
++ +GV R +GP +N V F + G P+ + GSG Q +V DL
Sbjct: 246 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 305
Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
V ++ N S V N+ + T A+ G E+ + + D K+K
Sbjct: 306 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK 362
Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
P ++KAK +LGW+P L EGL + + +RKE ++ ++ + K
Sbjct: 363 --P--------DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
Score = 55 (24.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL 24
GG F+G L+ L+ +GH+VT+
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTV 117
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 100 (40.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
++ +GV R +GP +N V F + G P+ + GSG Q +V DL
Sbjct: 246 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 305
Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
V ++ N S V N+ + T A+ G E+ + + D K+K
Sbjct: 306 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK 362
Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
P ++KAK +LGW+P L EGL + + +RKE ++ ++ + K
Sbjct: 363 --P--------DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
Score = 55 (24.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL 24
GG F+G L+ L+ +GH+VT+
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTV 117
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 100 (40.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
++ +GV R +GP +N V F + G P+ + GSG Q +V DL
Sbjct: 246 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 305
Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
V ++ N S V N+ + T A+ G E+ + + D K+K
Sbjct: 306 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK 362
Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
P ++KAK +LGW+P L EGL + + +RKE ++ ++ + K
Sbjct: 363 --P--------DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
Score = 55 (24.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL 24
GG F+G L+ L+ +GH+VT+
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTV 117
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 100 (40.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
++ +GV R +GP +N V F + G P+ + GSG Q +V DL
Sbjct: 246 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 305
Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
V ++ N S V N+ + T A+ G E+ + + D K+K
Sbjct: 306 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK 362
Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
P ++KAK +LGW+P L EGL + + +RKE ++ ++ + K
Sbjct: 363 --P--------DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
Score = 55 (24.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL 24
GG F+G L+ L+ +GH+VT+
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTV 117
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 100 (40.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
++ +GV R +GP +N V F + G P+ + GSG Q +V DL
Sbjct: 246 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 305
Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
V ++ N S V N+ + T A+ G E+ + + D K+K
Sbjct: 306 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKNLVGSGS-EIQFLSEAQDDPQKRK 362
Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
P ++KAK +LGW+P L EGL + + +RKE ++ ++ + K
Sbjct: 363 --P--------DIKKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
Score = 55 (24.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL 24
GG F+G L+ L+ +GH+VT+
Sbjct: 95 GGAGFVGSHLTDKLMMDGHEVTV 117
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 100 (40.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 45/180 (25%), Positives = 74/180 (41%)
Query: 132 LESKGVNWTSLRPVYIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQVTQLGHVKDL 188
++ +GV R +GP +N V F + G P+ + G G Q +V DL
Sbjct: 247 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDL 306
Query: 189 ARAFVQVLGNEKASRQVFNISGEKYVTFDGLARACAKAAGFPEPELVHYNPKEFDFGKKK 248
V ++ N S V N+ + T A+ K G E+ + + D K+K
Sbjct: 307 VNGLVALM-NSNVSSPV-NLGNPEEHTILEFAQLIKKLVGSGS-EIQFLSEAQDDPQKRK 363
Query: 249 AFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGK 308
P + KAK +LGW+P L EGL + + +RKE ++ ++ + K
Sbjct: 364 --P--------DIRKAKLLLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 407
Score = 55 (24.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 GGTRFIGVFLSRLLVKEGHQVTL 24
GG F+G L+ L+ +GH+VT+
Sbjct: 96 GGAGFVGSHLTDKLMMDGHEVTV 118
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 314 0.00081 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 606 (64 KB)
Total size of DFA: 220 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.80u 0.21s 25.01t Elapsed: 00:00:01
Total cpu time: 24.80u 0.22s 25.02t Elapsed: 00:00:01
Start: Sat May 11 14:04:16 2013 End: Sat May 11 14:04:17 2013