Query 021335
Match_columns 314
No_of_seqs 138 out of 1266
Neff 8.8
Searched_HMMs 13730
Date Mon Mar 25 16:09:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021335.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021335hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rh5b_ f.23.28.1 (B:) Preprot 31.5 18 0.0013 21.5 2.8 34 94-133 11-44 (56)
2 d1a1ia3 g.37.1.1 (A:160-187) Z 30.6 6 0.00044 19.8 0.3 8 306-313 2-9 (28)
3 d1p7aa_ g.37.1.1 (A:) Kruppel- 18.0 19 0.0014 19.2 0.8 10 305-314 9-18 (37)
4 d1x6ea2 g.37.1.1 (A:41-66) Zin 17.0 18 0.0013 17.9 0.5 9 306-314 1-9 (26)
5 d1a1ia2 g.37.1.1 (A:132-159) Z 16.9 18 0.0013 18.2 0.5 9 306-314 2-10 (28)
6 d2ct1a2 g.37.1.1 (A:8-43) Tran 10.7 33 0.0024 18.1 0.5 10 305-314 6-15 (36)
7 d1x6ha2 g.37.1.1 (A:8-43) Tran 9.9 37 0.0027 17.8 0.5 10 305-314 6-15 (36)
8 d1srka_ g.37.1.1 (A:) Zinc fin 9.3 41 0.003 17.6 0.5 10 305-314 5-14 (35)
9 d1v54d_ f.23.1.1 (D:) Mitochon 8.9 2E+02 0.015 20.1 4.4 24 94-120 64-87 (144)
10 d2cota2 g.37.1.1 (A:7-44) Zinc 7.5 65 0.0047 16.9 0.9 10 305-314 10-19 (38)
No 1
>d1rh5b_ f.23.28.1 (B:) Preprotein translocase SecE subunit {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=31.52 E-value=18 Score=21.46 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=19.2
Q ss_pred HHhhhccCCccchhhhhHHHHHHHHHHHHHHhhhhhhhhc
Q 021335 94 IQDTLKSSPPENKSMKRATAVGVTTTTLFYIMCGVMGYLA 133 (314)
Q Consensus 94 i~~~m~~p~~~~~~~~~v~~~s~~~~~~~y~~~g~~gY~~ 133 (314)
+.+-.++| +++.|.++...+-.- ..++|..||.-
T Consensus 11 vlk~~~KP--~~~Ef~~ia~v~~iG----~~i~G~IGf~I 44 (56)
T d1rh5b_ 11 VWLVLKKP--TKDEYLAVAKVTALG----ISLLGIIGYII 44 (56)
T ss_dssp HHHSEECC--CHHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred HHHHhcCC--CHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 34445677 678888776544222 23456666643
No 2
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.57 E-value=6 Score=19.82 Aligned_cols=8 Identities=38% Similarity=0.430 Sum_probs=7.0
Q ss_pred cccccccc
Q 021335 306 KPFQAVQE 313 (314)
Q Consensus 306 ~~f~~~~~ 313 (314)
+||+|..|
T Consensus 2 kPf~C~~C 9 (28)
T d1a1ia3 2 KPFACDIC 9 (28)
T ss_dssp CCEECTTT
T ss_pred CCcccchh
Confidence 79999887
No 3
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.97 E-value=19 Score=19.24 Aligned_cols=10 Identities=40% Similarity=0.637 Sum_probs=8.5
Q ss_pred cccccccccC
Q 021335 305 YKPFQAVQEE 314 (314)
Q Consensus 305 ~~~f~~~~~~ 314 (314)
-+||.|.+|+
T Consensus 9 eKPy~C~~C~ 18 (37)
T d1p7aa_ 9 IKPFQCPDCD 18 (37)
T ss_dssp SSSBCCTTTC
T ss_pred ccCeEeCCCC
Confidence 7899998875
No 4
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.96 E-value=18 Score=17.85 Aligned_cols=9 Identities=22% Similarity=0.652 Sum_probs=6.8
Q ss_pred ccccccccC
Q 021335 306 KPFQAVQEE 314 (314)
Q Consensus 306 ~~f~~~~~~ 314 (314)
+||.|.+|+
T Consensus 1 KPy~C~eCg 9 (26)
T d1x6ea2 1 KPYKCLECG 9 (26)
T ss_dssp CCEECSSSC
T ss_pred CCccCCCCc
Confidence 588888774
No 5
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.95 E-value=18 Score=18.17 Aligned_cols=9 Identities=44% Similarity=0.449 Sum_probs=7.3
Q ss_pred ccccccccC
Q 021335 306 KPFQAVQEE 314 (314)
Q Consensus 306 ~~f~~~~~~ 314 (314)
+||.|.+|+
T Consensus 2 KPy~C~~C~ 10 (28)
T d1a1ia2 2 KPFQCRICM 10 (28)
T ss_dssp CCEECTTTC
T ss_pred cCccCCCCc
Confidence 789998874
No 6
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.73 E-value=33 Score=18.06 Aligned_cols=10 Identities=20% Similarity=0.328 Sum_probs=8.2
Q ss_pred cccccccccC
Q 021335 305 YKPFQAVQEE 314 (314)
Q Consensus 305 ~~~f~~~~~~ 314 (314)
-+||.|.+|.
T Consensus 6 ekP~~C~~C~ 15 (36)
T d2ct1a2 6 EKPYECYICH 15 (36)
T ss_dssp CCSEECTTTC
T ss_pred CCCEeCCCCc
Confidence 6899998874
No 7
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.88 E-value=37 Score=17.82 Aligned_cols=10 Identities=20% Similarity=0.448 Sum_probs=8.1
Q ss_pred cccccccccC
Q 021335 305 YKPFQAVQEE 314 (314)
Q Consensus 305 ~~~f~~~~~~ 314 (314)
-+||.|.+|.
T Consensus 6 ekPy~C~~C~ 15 (36)
T d1x6ha2 6 EKPYACSHCD 15 (36)
T ss_dssp CCCEECSSSS
T ss_pred CCCEECCCCC
Confidence 6899998874
No 8
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.32 E-value=41 Score=17.62 Aligned_cols=10 Identities=20% Similarity=0.152 Sum_probs=7.9
Q ss_pred cccccccccC
Q 021335 305 YKPFQAVQEE 314 (314)
Q Consensus 305 ~~~f~~~~~~ 314 (314)
-+||.|.+|.
T Consensus 5 ekPy~C~~C~ 14 (35)
T d1srka_ 5 KRPFVCRICL 14 (35)
T ss_dssp CSCEECSSSC
T ss_pred CccccCCCCC
Confidence 6899998873
No 9
>d1v54d_ f.23.1.1 (D:) Mitochondrial cytochrome c oxidase subunit IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=8.88 E-value=2e+02 Score=20.08 Aligned_cols=24 Identities=8% Similarity=0.011 Sum_probs=15.1
Q ss_pred HHhhhccCCccchhhhhHHHHHHHHHH
Q 021335 94 IQDTLKSSPPENKSMKRATAVGVTTTT 120 (314)
Q Consensus 94 i~~~m~~p~~~~~~~~~v~~~s~~~~~ 120 (314)
-+.||..|+ ..++.++..++..+.
T Consensus 64 t~ae~~~p~---gewK~v~g~~~~~i~ 87 (144)
T d1v54d_ 64 SFAEMNRST---NEWKTVVGAAMFFIG 87 (144)
T ss_dssp CHHHHTCCC---SHHHHHHHHHHHHHH
T ss_pred ccccccCCC---CchhHHHHHHHHHHH
Confidence 467888884 467777665544433
No 10
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.53 E-value=65 Score=16.94 Aligned_cols=10 Identities=0% Similarity=0.072 Sum_probs=7.9
Q ss_pred cccccccccC
Q 021335 305 YKPFQAVQEE 314 (314)
Q Consensus 305 ~~~f~~~~~~ 314 (314)
-+||.|.+|.
T Consensus 10 ekpy~C~~Cg 19 (38)
T d2cota2 10 RRRYKCDECG 19 (38)
T ss_dssp SCSSBCSSSC
T ss_pred CCCEecCCCC
Confidence 7889998873
Done!