Query 021336
Match_columns 314
No_of_seqs 119 out of 1432
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 09:26:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021336.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021336hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 5.5E-49 1.2E-53 364.4 36.0 306 2-307 170-475 (478)
2 COG1473 AbgB Metal-dependent a 100.0 5.8E-49 1.3E-53 351.5 34.8 302 2-308 87-391 (392)
3 PLN02693 IAA-amino acid hydrol 100.0 6.8E-48 1.5E-52 355.0 35.8 303 3-308 121-423 (437)
4 PRK08588 succinyl-diaminopimel 100.0 3.2E-41 7E-46 307.6 29.2 284 5-307 83-377 (377)
5 TIGR01891 amidohydrolases amid 100.0 1.9E-40 4.1E-45 300.8 33.0 286 3-292 75-361 (363)
6 PRK13013 succinyl-diaminopimel 100.0 3.2E-39 6.9E-44 299.1 28.8 289 3-308 104-424 (427)
7 PRK06915 acetylornithine deace 100.0 4.2E-39 9E-44 297.8 27.8 286 4-309 116-421 (422)
8 PRK07338 hypothetical protein; 100.0 8.9E-39 1.9E-43 293.8 29.1 283 4-308 109-400 (402)
9 TIGR01910 DapE-ArgE acetylorni 100.0 3.4E-39 7.3E-44 294.0 22.8 276 4-297 87-375 (375)
10 PRK06133 glutamate carboxypept 100.0 4.8E-38 1E-42 289.1 29.7 285 3-308 119-409 (410)
11 PRK08651 succinyl-diaminopimel 100.0 7.8E-38 1.7E-42 287.0 27.3 285 2-308 94-393 (394)
12 PRK13009 succinyl-diaminopimel 100.0 2.1E-37 4.6E-42 282.3 29.0 281 5-306 82-374 (375)
13 PRK13983 diaminopimelate amino 100.0 8.9E-38 1.9E-42 287.2 26.2 285 4-304 99-399 (400)
14 TIGR01246 dapE_proteo succinyl 100.0 1.5E-37 3.3E-42 282.7 26.9 281 4-305 78-370 (370)
15 TIGR01880 Ac-peptdase-euk N-ac 100.0 3.2E-37 7E-42 283.2 27.2 289 3-306 92-398 (400)
16 PRK06837 acetylornithine deace 100.0 4.9E-37 1.1E-41 283.9 27.8 285 3-308 119-424 (427)
17 PRK00466 acetyl-lysine deacety 100.0 9.1E-37 2E-41 275.0 26.9 263 9-309 80-346 (346)
18 PRK05111 acetylornithine deace 100.0 1E-36 2.3E-41 278.5 27.2 277 2-307 91-382 (383)
19 PRK07473 carboxypeptidase; Pro 100.0 3.2E-36 6.9E-41 273.7 29.0 274 4-305 96-375 (376)
20 PRK13004 peptidase; Reviewed 100.0 1.4E-36 3.1E-41 278.7 26.1 285 4-308 92-398 (399)
21 TIGR01892 AcOrn-deacetyl acety 100.0 2.7E-36 5.9E-41 274.0 27.0 271 3-301 79-363 (364)
22 PRK08652 acetylornithine deace 100.0 2.4E-36 5.1E-41 272.7 26.4 266 10-307 76-346 (347)
23 TIGR03320 ygeY M20/DapE family 100.0 2.3E-36 5E-41 277.1 26.1 282 4-307 90-395 (395)
24 PRK08262 hypothetical protein; 100.0 3.5E-36 7.7E-41 282.6 27.3 288 5-307 137-485 (486)
25 PRK07522 acetylornithine deace 100.0 3.9E-36 8.4E-41 274.9 26.5 276 3-306 85-384 (385)
26 PRK08596 acetylornithine deace 100.0 6.3E-36 1.4E-40 276.1 27.4 286 4-309 100-419 (421)
27 TIGR03526 selenium_YgeY putati 100.0 4.2E-36 9.1E-41 275.3 26.0 283 5-307 91-395 (395)
28 PRK09133 hypothetical protein; 100.0 9.3E-36 2E-40 278.8 27.1 286 3-307 122-470 (472)
29 PRK12891 allantoate amidohydro 100.0 6.6E-35 1.4E-39 268.6 31.9 271 17-308 94-411 (414)
30 PRK05469 peptidase T; Provisio 100.0 4.4E-35 9.4E-40 269.6 27.7 266 17-308 139-407 (408)
31 PRK06446 hypothetical protein; 100.0 2.6E-35 5.6E-40 273.1 24.1 289 3-306 84-434 (436)
32 PRK08737 acetylornithine deace 100.0 2E-34 4.3E-39 260.6 27.4 268 3-304 83-363 (364)
33 PRK04443 acetyl-lysine deacety 100.0 8.9E-35 1.9E-39 262.2 25.0 264 5-305 76-348 (348)
34 TIGR01900 dapE-gram_pos succin 100.0 4E-34 8.7E-39 259.8 28.1 259 8-287 90-373 (373)
35 TIGR01883 PepT-like peptidase 100.0 2.7E-34 5.8E-39 260.6 26.4 267 9-302 84-360 (361)
36 PRK12892 allantoate amidohydro 100.0 1.6E-33 3.4E-38 259.8 31.8 269 21-307 96-411 (412)
37 PRK12893 allantoate amidohydro 100.0 1.2E-33 2.6E-38 260.6 30.7 272 20-308 97-411 (412)
38 TIGR01886 dipeptidase dipeptid 100.0 1.4E-34 3E-39 269.6 24.3 279 4-307 99-466 (466)
39 PRK09290 allantoate amidohydro 100.0 2E-33 4.4E-38 258.9 31.1 267 19-307 93-411 (413)
40 PRK13007 succinyl-diaminopimel 100.0 4.3E-34 9.4E-39 258.4 25.4 258 9-302 83-351 (352)
41 PRK13381 peptidase T; Provisio 100.0 1.4E-33 3.1E-38 259.3 28.9 270 10-306 123-403 (404)
42 TIGR03176 AllC allantoate amid 100.0 3.8E-33 8.3E-38 255.6 31.4 267 21-308 91-405 (406)
43 PRK12890 allantoate amidohydro 100.0 1.2E-32 2.5E-37 254.0 32.0 272 17-307 92-412 (414)
44 PRK08201 hypothetical protein; 100.0 8.9E-34 1.9E-38 264.5 24.8 286 4-305 102-453 (456)
45 PRK07906 hypothetical protein; 100.0 1E-33 2.2E-38 262.1 25.0 285 3-304 86-425 (426)
46 TIGR01882 peptidase-T peptidas 100.0 1.7E-33 3.6E-38 258.9 25.2 270 11-306 135-407 (410)
47 TIGR01879 hydantase amidase, h 100.0 1.5E-32 3.3E-37 252.0 31.0 268 21-305 89-401 (401)
48 PRK07079 hypothetical protein; 100.0 7.9E-33 1.7E-37 258.8 26.5 289 4-308 109-457 (469)
49 COG0624 ArgE Acetylornithine d 100.0 1.1E-32 2.4E-37 253.9 26.7 283 5-307 99-408 (409)
50 PRK07318 dipeptidase PepV; Rev 100.0 4.2E-33 9E-38 260.3 23.8 280 4-307 100-466 (466)
51 PRK09104 hypothetical protein; 100.0 2E-32 4.4E-37 255.8 27.5 288 4-306 105-462 (464)
52 PRK06156 hypothetical protein; 100.0 1.5E-32 3.3E-37 259.0 26.3 284 4-307 136-516 (520)
53 TIGR01902 dapE-lys-deAc N-acet 100.0 1.4E-32 3.1E-37 246.8 24.0 261 9-308 70-336 (336)
54 PRK07907 hypothetical protein; 100.0 5E-32 1.1E-36 252.1 27.1 286 3-305 105-446 (449)
55 PRK13799 unknown domain/N-carb 100.0 6.3E-31 1.4E-35 250.4 32.6 267 21-306 273-589 (591)
56 PRK13590 putative bifunctional 100.0 7.3E-31 1.6E-35 250.2 32.6 266 21-307 273-588 (591)
57 KOG2275 Aminoacylase ACY1 and 100.0 1.5E-31 3.3E-36 232.7 23.9 290 4-306 110-418 (420)
58 PRK07205 hypothetical protein; 100.0 8.3E-31 1.8E-35 243.6 25.8 277 4-308 98-444 (444)
59 TIGR01887 dipeptidaselike dipe 100.0 3E-30 6.4E-35 238.9 21.6 276 4-302 88-447 (447)
60 TIGR01893 aa-his-dipept aminoa 100.0 1.4E-29 3E-34 237.1 25.8 274 4-305 88-476 (477)
61 PRK15026 aminoacyl-histidine d 100.0 3.5E-29 7.6E-34 233.0 26.1 271 4-305 94-482 (485)
62 PRK08554 peptidase; Reviewed 100.0 5.2E-29 1.1E-33 230.2 21.2 285 3-307 84-438 (438)
63 COG2195 PepD Di- and tripeptid 99.8 1.5E-19 3.2E-24 162.5 17.3 261 19-305 145-411 (414)
64 KOG2276 Metalloexopeptidases [ 99.8 1E-18 2.2E-23 151.6 20.7 288 4-307 114-472 (473)
65 PF07687 M20_dimer: Peptidase 99.8 1.8E-17 3.9E-22 124.5 12.2 103 95-197 3-110 (111)
66 PF01546 Peptidase_M20: Peptid 99.7 3.2E-17 7E-22 135.0 9.2 160 3-303 17-188 (189)
67 COG4187 RocB Arginine degradat 98.8 6.7E-08 1.4E-12 85.8 11.0 171 13-189 132-320 (553)
68 TIGR03106 trio_M42_hydro hydro 98.6 1.2E-06 2.7E-11 78.4 13.2 72 220-302 265-339 (343)
69 PRK09961 exoaminopeptidase; Pr 98.4 1.4E-06 3.1E-11 78.2 10.2 78 218-305 253-333 (344)
70 PRK09864 putative peptidase; P 98.1 8.7E-05 1.9E-09 66.6 13.8 77 219-305 262-341 (356)
71 COG1363 FrvX Cellulase M and r 98.1 8E-05 1.7E-09 66.4 13.3 79 220-308 268-349 (355)
72 TIGR03107 glu_aminopep glutamy 97.4 0.00025 5.5E-09 63.7 5.9 77 218-305 262-341 (350)
73 PF04389 Peptidase_M28: Peptid 97.3 0.00024 5.1E-09 57.7 3.8 63 15-77 20-88 (179)
74 PRK10199 alkaline phosphatase 96.9 0.0017 3.7E-08 57.9 5.3 49 14-64 136-188 (346)
75 PF05343 Peptidase_M42: M42 gl 96.6 0.0045 9.7E-08 54.4 6.1 67 6-77 120-189 (292)
76 TIGR03107 glu_aminopep glutamy 96.4 0.011 2.4E-07 53.2 6.9 64 12-80 170-236 (350)
77 PF05343 Peptidase_M42: M42 gl 94.6 0.026 5.7E-07 49.6 2.8 70 218-297 220-292 (292)
78 COG2234 Iap Predicted aminopep 94.2 0.11 2.3E-06 48.5 6.2 64 12-77 219-289 (435)
79 KOG2194 Aminopeptidases of the 92.5 0.15 3.2E-06 50.4 4.1 63 15-77 159-224 (834)
80 PF05450 Nicastrin: Nicastrin; 91.1 0.82 1.8E-05 38.8 6.7 48 16-63 19-73 (234)
81 PTZ00371 aspartyl aminopeptida 89.6 0.75 1.6E-05 43.2 5.7 81 218-307 372-457 (465)
82 PRK02256 putative aminopeptida 89.4 0.48 1E-05 44.3 4.3 74 220-302 381-459 (462)
83 PRK02813 putative aminopeptida 88.5 0.69 1.5E-05 43.0 4.6 75 219-302 346-425 (428)
84 TIGR01893 aa-his-dipept aminoa 87.5 1.3 2.7E-05 42.0 5.8 44 144-193 336-379 (477)
85 KOG2195 Transferrin receptor a 79.9 2.2 4.8E-05 42.1 4.0 44 21-64 373-420 (702)
86 PRK02256 putative aminopeptida 54.3 20 0.00044 33.7 4.5 43 10-56 250-295 (462)
87 PRK15026 aminoacyl-histidine d 53.4 36 0.00079 32.3 6.1 43 146-194 344-386 (485)
88 COG4187 RocB Arginine degradat 45.6 1.3E+02 0.0029 28.1 8.0 40 266-311 511-551 (553)
89 cd06406 PB1_P67 A PB1 domain i 42.2 51 0.0011 22.8 3.8 29 165-193 8-36 (80)
90 PRK06156 hypothetical protein; 41.3 2.1E+02 0.0045 27.5 9.3 24 148-171 241-264 (520)
91 PRK02813 putative aminopeptida 39.6 35 0.00076 31.8 3.6 44 11-59 225-274 (428)
92 PF03755 YicC_N: YicC-like fam 34.4 2.3E+02 0.005 22.3 7.2 64 168-234 31-94 (159)
93 cd06411 PB1_p51 The PB1 domain 34.1 64 0.0014 22.2 3.3 31 165-195 4-34 (78)
94 PTZ00371 aspartyl aminopeptida 33.7 70 0.0015 30.3 4.6 48 10-57 241-292 (465)
95 PF06675 DUF1177: Protein of u 33.5 56 0.0012 27.8 3.5 63 16-78 53-130 (276)
96 TIGR03406 FeS_long_SufT probab 29.5 3E+02 0.0065 22.1 7.8 29 165-193 114-142 (174)
97 TIGR01887 dipeptidaselike dipe 24.7 1.4E+02 0.003 28.1 5.0 24 152-175 195-218 (447)
98 TIGR02159 PA_CoA_Oxy4 phenylac 22.6 3.7E+02 0.0081 20.9 6.2 65 164-239 25-90 (146)
99 PF03668 ATP_bind_2: P-loop AT 22.5 1.4E+02 0.0031 26.1 4.2 30 147-177 161-190 (284)
100 KOG2526 Predicted aminopeptida 22.0 1.8E+02 0.0038 27.2 4.8 62 16-77 234-304 (555)
101 cd04869 ACT_GcvR_2 ACT domains 20.4 2.7E+02 0.0059 18.4 4.9 38 163-204 42-79 (81)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=5.5e-49 Score=364.39 Aligned_cols=306 Identities=54% Similarity=0.883 Sum_probs=263.9
Q ss_pred CCCCcccCCCCccccChhHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCCccHHHHHHcCCCCccceeeEeccCCC
Q 021336 2 VEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPV 81 (314)
Q Consensus 2 ~~~p~~~~~~g~~~~~G~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~~G~~~l~~~~~~~~~d~~i~~~~~~~ 81 (314)
++|+|.++++|++||||||+++|++|+|++.|++.+.+++++|.|+|++|||.+.|+++++++|.++++|+++++|+.+.
T Consensus 170 ~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~ 249 (478)
T PLN02280 170 VEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHE 249 (478)
T ss_pred CCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCC
Confidence 35888899999999999999999999999999988888999999999999997679999999998888899999998666
Q ss_pred CCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCcc
Q 021336 82 LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNI 161 (314)
Q Consensus 82 ~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nv 161 (314)
.|.+.+....+...+|..+++|+++|+++|++.|+.|.||+..+++++..++++..+..++....+++++.|+||...|+
T Consensus 250 ~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~Nv 329 (478)
T PLN02280 250 HPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDM 329 (478)
T ss_pred CCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCE
Confidence 77777766666677799999999999999999999999999999999999988764443444567899999999999999
Q ss_pred ccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcc
Q 021336 162 IPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVH 241 (314)
Q Consensus 162 ip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~ 241 (314)
||++|++++++|+++..+.+++.++|+++++..+..++++++++........++++.+++++++.+.++..+.+|.+.+.
T Consensus 330 IPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~ 409 (478)
T PLN02280 330 IPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFT 409 (478)
T ss_pred eCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccc
Confidence 99999999999999999999999999999998877788887776421112346778889999999999998877765432
Q ss_pred cCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 242 LTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 242 ~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
.....++++|+++|.+.+|++++++|++++.+|....+|+++|++++++|..++++|+.++.+++.
T Consensus 410 ~~~~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~ 475 (478)
T PLN02280 410 VVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLI 475 (478)
T ss_pred cCCCCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 223567899999999889999888898765444455799999999999999999999999999885
No 2
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=5.8e-49 Score=351.52 Aligned_cols=302 Identities=44% Similarity=0.691 Sum_probs=275.3
Q ss_pred CCCCcccCCCCccccChhHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCCccHHHHHHcCCCCc-cceeeEeccCC
Q 021336 2 VEWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDK-FQGMFGIHISP 80 (314)
Q Consensus 2 ~~~p~~~~~~g~~~~~G~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~~G~~~l~~~~~~~~-~d~~i~~~~~~ 80 (314)
+++||+|+++|++|+||||++.+++|+|++.|++...+++++|+|+|+|+||+++|++.|+++|.|++ +|+++.+|+.|
T Consensus 87 t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p 166 (392)
T COG1473 87 TGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGP 166 (392)
T ss_pred cCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCC
Confidence 67899999999999999999999999999999998778999999999999998778999999999999 99999999987
Q ss_pred CCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCc
Q 021336 81 VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGN 160 (314)
Q Consensus 81 ~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~n 160 (314)
+.|.|.+..+.|........++|+++|+++|++.|+.++||+..++.++..||.+..+..++....+++++.+++|.+.|
T Consensus 167 ~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~N 246 (392)
T COG1473 167 GLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAAN 246 (392)
T ss_pred CCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCC
Confidence 76889998898988888999999999999999999999999999999999999998888888778999999999999999
Q ss_pred cccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCc
Q 021336 161 IIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNV 240 (314)
Q Consensus 161 vip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~ 240 (314)
+||+.+++.+++|.+.....+.+.++|+++++.++..+++++++.+ ...+|++.+|+.+.+.+++++++..|...+
T Consensus 247 VIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~----~~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~ 322 (392)
T COG1473 247 VIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDY----ERGYPPVVNDPALTDLLAEAAEEVGGEEVV 322 (392)
T ss_pred cCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe----cCCCCCccCCHHHHHHHHHHHHHhccccce
Confidence 9999999999999999999999999999999999999999999999 788899999999999999999999763322
Q ss_pred --ccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 021336 241 --HLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 241 --~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 308 (314)
......+|++|+++|.+.+|..++++|..... +.....|+|...++.+.+..+++++..+++.++.+
T Consensus 323 ~~~~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~-~~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 323 VVELPPSMAGSEDFGYYLEKVPGAFFFLGTGSAD-GGTYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred ecccCCCCCccchHHHHHHhCCeeEEEeecCcCC-CCcccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 12223459999999999999999999976644 11345999999999999999999999999988764
No 3
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=6.8e-48 Score=355.02 Aligned_cols=303 Identities=48% Similarity=0.817 Sum_probs=261.6
Q ss_pred CCCcccCCCCccccChhHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCCccHHHHHHcCCCCccceeeEeccCCCC
Q 021336 3 EWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVL 82 (314)
Q Consensus 3 ~~p~~~~~~g~~~~~G~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~~G~~~l~~~~~~~~~d~~i~~~~~~~~ 82 (314)
+|+|.+.++|++|+||||+++|++++|++.|++.+..++++|.|+|++|||++.|++.++++|.+++.|++++.|.++..
T Consensus 121 ~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~iig~h~~p~~ 200 (437)
T PLN02693 121 EWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSPRT 200 (437)
T ss_pred CCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEEEEecCCCC
Confidence 57888889999999999999999999999999988778999999999999976799999999988778899998888877
Q ss_pred CceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCccc
Q 021336 83 PTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNII 162 (314)
Q Consensus 83 ~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nvi 162 (314)
+.|.+..+.|..++|..+++|+++|+++|++.|+.|.|||..++++|.+|+++..+..++....+++++.|+||...|+|
T Consensus 201 ~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~GG~~~NvV 280 (437)
T PLN02693 201 PFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVI 280 (437)
T ss_pred CCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEcCCCCceE
Confidence 78887777788888999999999999999999999999999999999999987654444556789999999999999999
Q ss_pred cCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCccc
Q 021336 163 PEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHL 242 (314)
Q Consensus 163 p~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~ 242 (314)
|++|++++++|+.+.. +.+.++|+++++..+..++++++++......++++++.+|+++++.+.+++++.+|.+.+..
T Consensus 281 Pd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~~~~ 358 (437)
T PLN02693 281 PDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLLGQEAFVE 358 (437)
T ss_pred CCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhcCCcceee
Confidence 9999999999999974 68999999999987777788777765211124567788899999999999999888775422
Q ss_pred CCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 021336 243 TPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 243 ~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 308 (314)
....+|++|+++|.+.+|.+++++|++++..+ ....|+|+|+++.+.|..++++|+.++.+++++
T Consensus 359 ~~~~~gseDf~~~~~~vP~~~~~lG~~~~~~~-~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~ 423 (437)
T PLN02693 359 AAPEMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHATMAVQYLKE 423 (437)
T ss_pred cCCCceechHHHHHHHhhhhEEEEecCCCCCC-CCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 23567999999999999999999998854211 246999999999999999999999999999875
No 4
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.2e-41 Score=307.56 Aligned_cols=284 Identities=21% Similarity=0.227 Sum_probs=231.4
Q ss_pred Cccc-CCCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCCCCccceeeEeccC
Q 021336 5 EHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHIS 79 (314)
Q Consensus 5 p~~~-~~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~~~d~~i~~~~~ 79 (314)
||+. .++|++||||+ +++++++|.|+++|++.+..++++|.|+|++|||. +.|++.+++++.++++|++++.++.
T Consensus 83 Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~ep~ 162 (377)
T PRK08588 83 PFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGEPS 162 (377)
T ss_pred CCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEecCC
Confidence 8884 57899999994 58999999999999999888899999999999994 5799999999877788988876542
Q ss_pred CCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc---CCCCCCeEEEEEEEecC
Q 021336 80 PVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE---TDPLEARVVTVGFIDAG 156 (314)
Q Consensus 80 ~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~---~~~~~~~~~~v~~i~gG 156 (314)
. ...+. .++|..+++|+++|+++|+|.|+.|.||+..+++++.+++++..+. ......++++++.|+||
T Consensus 163 ~---~~i~~-----~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~gG 234 (377)
T PRK08588 163 G---HGIVY-----AHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIINGG 234 (377)
T ss_pred C---ceeEE-----EEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEeCC
Confidence 1 12222 2358899999999999999999999999999999999998764321 12234679999999999
Q ss_pred CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcC
Q 021336 157 QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVG 236 (314)
Q Consensus 157 ~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g 236 (314)
...|+||++|++++++|+.|.++.+++.+.|+++++......+++++++... ..+....+.++++++.+++++++.+|
T Consensus 235 ~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~l~~~~~~~~~~~~g 312 (377)
T PRK08588 235 EQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIYS--NHRPVASDKDSKLVQLAKDVAKSYVG 312 (377)
T ss_pred CcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEec--CCCCcCCCCCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999987665556667776521 11222234568999999999999888
Q ss_pred CCCcccCCCCCCCCcHHHHHhh---cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 237 EPNVHLTPVEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 237 ~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
.++. ....+|+||+++|... +|++ .+||+.. ..+|++||+++++++.+++++|+.++.++|+
T Consensus 313 ~~~~--~~~~~g~tD~~~~~~~~~~ip~i--~~Gpg~~-----~~~H~~~E~i~~~~l~~~~~~~~~~~~~~~~ 377 (377)
T PRK08588 313 QDIP--LSAIPGATDASSFLKKKPDFPVI--IFGPGNN-----LTAHQVDEYVEKDMYLKFIDIYKEIIIQYLK 377 (377)
T ss_pred CCCc--eecCCCcccHHHHhhhcCCCCEE--EECCCCC-----ccCCCCCceeEHHHHHHHHHHHHHHHHHHhC
Confidence 7653 3467889999999853 5654 4787632 3499999999999999999999999999874
No 5
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=1.9e-40 Score=300.81 Aligned_cols=286 Identities=44% Similarity=0.716 Sum_probs=238.8
Q ss_pred CCCcccCCCCccccChhHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCCccHHHHHHcCCCCccceeeEeccCCCC
Q 021336 3 EWEHKSKNNGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVL 82 (314)
Q Consensus 3 ~~p~~~~~~g~~~~~G~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~~G~~~l~~~~~~~~~d~~i~~~~~~~~ 82 (314)
..||....+|++||||+|+++|++++|+..|++.+..++++|.|+|++|||.+.|++.+++++.+++.|++++.|++++.
T Consensus 75 ~~pf~~~~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~ 154 (363)
T TIGR01891 75 DLPYKSTNPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSI 154 (363)
T ss_pred CCCcccCCCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCC
Confidence 36888777899999999999999999999999887778899999999999976899999998877788999999987766
Q ss_pred CceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCccc
Q 021336 83 PTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNII 162 (314)
Q Consensus 83 ~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nvi 162 (314)
+.+.+....+..++|..+++|+++|+++|++.|+.|.||+..+++++.+++++...........+++++.|+||.+.|+|
T Consensus 155 ~~~~~~~~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvv 234 (363)
T TIGR01891 155 PAGTVGLRPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVI 234 (363)
T ss_pred CCeEEEECCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEE
Confidence 77766556667778899999999999999999999999999999999999876432222333568999999999999999
Q ss_pred cCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcc-
Q 021336 163 PEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVH- 241 (314)
Q Consensus 163 p~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~- 241 (314)
|++|++.+|+|++|..+.+++.+.|+++++..+...+.+++++. ...+++...|+++++.+++++++++|..++.
T Consensus 235 P~~~~~~~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~----~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~ 310 (363)
T TIGR01891 235 PDKASMSGTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNY----DRGLPAVTNDPALTQILKEVARHVVGPENVAE 310 (363)
T ss_pred CCeeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE----ecCCCCccCCHHHHHHHHHHHHHhcCccceec
Confidence 99999999999999999999999999999988777788888876 3344445568899999999999987854321
Q ss_pred cCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchH
Q 021336 242 LTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALP 292 (314)
Q Consensus 242 ~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~ 292 (314)
.+..++|++|+++|++.+|++++|+|....+.++....|++++..+.+-+.
T Consensus 311 ~~~~~~gg~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~~ 361 (363)
T TIGR01891 311 DPEVTMGSEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEALA 361 (363)
T ss_pred cCCCCccccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHhc
Confidence 123678999999999889999999887754212235699999988776543
No 6
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.2e-39 Score=299.13 Aligned_cols=289 Identities=15% Similarity=0.097 Sum_probs=227.0
Q ss_pred CCCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-C-ccHHHHHHcCCCC--ccceee
Q 021336 3 EWEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y-GGAYYMIKEGAVD--KFQGMF 74 (314)
Q Consensus 3 ~~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~-~G~~~l~~~~~~~--~~d~~i 74 (314)
..||+.. ++|++||+| ||++++++|+|++.|++.+..++++|.|+|++|||. + +|.+++++++.+. ++|+++
T Consensus 104 ~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~d~~i 183 (427)
T PRK13013 104 RDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGGFGGVAYLAEQGRFSPDRVQHVI 183 (427)
T ss_pred CCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCChhHHHHHHhcCCccccCCCEEE
Confidence 4589865 689999988 789999999999999998888899999999999994 3 4777888887766 568888
Q ss_pred EeccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc----c-C------CCC
Q 021336 75 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR----E-T------DPL 143 (314)
Q Consensus 75 ~~~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~----~-~------~~~ 143 (314)
+.++.. ...+. ..++|..+++|+++|+++|++.|+.|.||+..++++|.++++...+ . . ...
T Consensus 184 ~~ep~~---~~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
T PRK13013 184 IPEPLN---KDRIC----LGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFPLLATRRTAMPVVPEGA 256 (427)
T ss_pred EecCCC---CCceE----EeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHHHHHhhhhhhcccccCCCCCccc
Confidence 865421 12221 1235889999999999999999999999999999999999764311 0 0 001
Q ss_pred CCeEEEEEEEecCCCC----------ccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHh-CCeEEEEEeccccc
Q 021336 144 EARVVTVGFIDAGQAG----------NIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVH-QCSATIDFLEEKMR 212 (314)
Q Consensus 144 ~~~~~~v~~i~gG~~~----------nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~ 212 (314)
...+++++.|+||... |+||++|++++|+|+++.++.+++.+.|++.+++.+... +++++++... ..
T Consensus 257 ~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~--~~ 334 (427)
T PRK13013 257 RQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALLERLKRARPGFAYEIRDLF--EV 334 (427)
T ss_pred CCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCceeEEEEcc--cC
Confidence 3578999999999776 999999999999999999999999999999998765432 4555554310 11
Q ss_pred CCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh--cCceEEEEecCCCCCCCCCCCCCCCCCCCCCc
Q 021336 213 HYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDA 290 (314)
Q Consensus 213 ~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~ 290 (314)
+....+.++++++.+.+++++.+|.++. ...+++++|++++.+. +|.++ .|||+.. ..+|++|||+++++
T Consensus 335 ~p~~~~~~~~lv~~l~~a~~~~~g~~~~--~~~~~g~~D~~~~~~~g~~~~~v-~fGPg~~-----~~aH~~nE~v~i~~ 406 (427)
T PRK13013 335 LPTMTDRDAPVVRSVAAAIERVLGRQAD--YVVSPGTYDQKHIDRIGKLKNCI-AYGPGIL-----DLAHQPDEWVGIAD 406 (427)
T ss_pred CcccCCCCCHHHHHHHHHHHHhhCCCCc--eeecCccCCHHHHHhcCCCCCEE-EECCCCc-----cccCCCCceeEHHH
Confidence 1222445669999999999998787653 2366888999999987 34333 4787643 35999999999999
Q ss_pred hHHHHHHHHHHHHHHhcc
Q 021336 291 LPIGAALHAAVAISYLDN 308 (314)
Q Consensus 291 l~~~~~~~~~~l~~l~~~ 308 (314)
+.+++++|+.++.+||+-
T Consensus 407 l~~~~~~l~~~l~~~~~~ 424 (427)
T PRK13013 407 MVDSAKVMALVLADLLAG 424 (427)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999999864
No 7
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=4.2e-39 Score=297.76 Aligned_cols=286 Identities=19% Similarity=0.192 Sum_probs=228.6
Q ss_pred CCcccC-CCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEecc
Q 021336 4 WEHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHI 78 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~ 78 (314)
.||.+. .+|++||||+ ||+++++|.|+++|++.+..++++|.|+|++||| ++.|+..++.+++ ++|++++.++
T Consensus 116 ~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~ep 193 (422)
T PRK06915 116 HPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQSVIEEESGGAGTLAAILRGY--KADGAIIPEP 193 (422)
T ss_pred CCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEecccccCCcchHHHHhcCc--CCCEEEECCC
Confidence 389876 6899999994 4888899999999999888889999999999999 5568888888764 5799887543
Q ss_pred CCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc----cCCCC-----CCeEEE
Q 021336 79 SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR----ETDPL-----EARVVT 149 (314)
Q Consensus 79 ~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~----~~~~~-----~~~~~~ 149 (314)
. +. .....++|..+++|+++|+++|+|.|+.|.||+..+++++..++++... ...+. .+.+++
T Consensus 194 --~---~~---~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~ 265 (422)
T PRK06915 194 --T---NM---KFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPIN 265 (422)
T ss_pred --C---Cc---cceeecccEEEEEEEEEeeccccCCCCcCcCHHHHHHHHHHHHHHHHHHhccccCCCcccCCCCCceEe
Confidence 2 21 1123446999999999999999999999999999999999999876431 11111 245899
Q ss_pred EEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHh----CCeEEEEEecccccCCCCccCCHHHHH
Q 021336 150 VGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVH----QCSATIDFLEEKMRHYPATVNDEKMYE 225 (314)
Q Consensus 150 v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~l~~ 225 (314)
++.|+||...|+||++|++.+++|+.|..+.+++.+.|++.+++.+... +..++++.... ......+..|+++++
T Consensus 266 v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~d~~lv~ 344 (422)
T PRK06915 266 IGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELNDVDEWFVEHPVEVEWFGA-RWVPGELEENHPLMT 344 (422)
T ss_pred EEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHhccChhhhcCCceEEeecc-cCCcccCCCCCHHHH
Confidence 9999999999999999999999999999999999999999998765421 22344443110 112234567889999
Q ss_pred HHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh--cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 021336 226 HGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAI 303 (314)
Q Consensus 226 ~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~--ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~ 303 (314)
.+.+++++++|.++. ...+++++|+++|.+. +|+++ |||+.. ..+|++||+++++++.+++++|+.++.
T Consensus 345 ~l~~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~--fGpg~~-----~~aH~~dE~v~~~~l~~~~~~~~~ll~ 415 (422)
T PRK06915 345 TLEHNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIV--FGPGET-----KVAHYPNEYIEVDKMIAAAKIIALTLL 415 (422)
T ss_pred HHHHHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEE--ECCCCc-----cccCCCCceeEHHHHHHHHHHHHHHHH
Confidence 999999998888754 2367789999999986 99865 676542 359999999999999999999999999
Q ss_pred HHhccc
Q 021336 304 SYLDNL 309 (314)
Q Consensus 304 ~l~~~~ 309 (314)
++|+..
T Consensus 416 ~~~~~~ 421 (422)
T PRK06915 416 DWCEVK 421 (422)
T ss_pred HHhCCC
Confidence 998754
No 8
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-39 Score=293.85 Aligned_cols=283 Identities=22% Similarity=0.268 Sum_probs=226.6
Q ss_pred CCccc---CCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEe
Q 021336 4 WEHKS---KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGI 76 (314)
Q Consensus 4 ~p~~~---~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~ 76 (314)
.||+. ..+|++||+| +||+++++|+|+++|++.+..++++|.|+|++||| ++.|++.+++++. .+.++.+++
T Consensus 109 ~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~-~~~~~~i~~ 187 (402)
T PRK07338 109 HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPDEEIGSPASAPLLAELA-RGKHAALTY 187 (402)
T ss_pred CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECCcccCChhhHHHHHHHh-ccCcEEEEe
Confidence 58875 5789999999 67999999999999998887888999999999999 4568888888754 356788877
Q ss_pred ccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEec
Q 021336 77 HISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-PQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDA 155 (314)
Q Consensus 77 ~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~-p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~g 155 (314)
++ +.+.+.+.. .++|..+++|+++|+++|++. |+.|.||+..+++++.+|+++... ....+++++.|+|
T Consensus 188 ep--~~~~~~v~~----~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~~i~~l~~l~~~----~~~~t~~vg~i~g 257 (402)
T PRK07338 188 EP--ALPDGTLAG----ARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAELALALHALNGQ----RDGVTVNVAKIDG 257 (402)
T ss_pred cC--CCCCCcEEe----ecceeEEEEEEEEeEcccCCCCcccCccHHHHHHHHHHHHHhhhcc----CCCcEEEEEEEec
Confidence 64 333344322 124889999999999999995 899999999999999999876432 2356899999999
Q ss_pred CCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhc
Q 021336 156 GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMV 235 (314)
Q Consensus 156 G~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~ 235 (314)
|.+.|+||++|++++++|+.|.++.+++.++|++++++.+...++++++.... ..+++...+.++++++.++++.++.
T Consensus 258 G~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~l~~~~~~~~~~~- 335 (402)
T PRK07338 258 GGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHGGF-GRPPKPIDAAQQRLFEAVQACGAAL- 335 (402)
T ss_pred CCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEccc-cCCCCCCCcchHHHHHHHHHHHHHc-
Confidence 99999999999999999999999999999999999987654556666654310 0122222234568999999988775
Q ss_pred CCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 021336 236 GEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 236 g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 308 (314)
|.++. ...++|++|++++... +|++. ++||+.. .+|++|||++++++.+++++|+.++.+|+..
T Consensus 336 g~~~~--~~~~~g~tDa~~~~~~giP~v~-~~Gpg~~------~~H~~~E~v~i~~l~~~~~~~~~~l~~~~~~ 400 (402)
T PRK07338 336 GLTID--WKDSGGVCDGNNLAAAGLPVVD-TLGVRGG------NIHSEDEFVILDSLVERAQLSALILMRLAQG 400 (402)
T ss_pred CCCcc--cccCCccchHHHHhhcCCCeEe-ccCCCCC------CCCCccceEehhhHHHHHHHHHHHHHHHhcC
Confidence 87653 3467889999999988 99874 5777643 3899999999999999999999999998653
No 9
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=3.4e-39 Score=294.02 Aligned_cols=276 Identities=19% Similarity=0.187 Sum_probs=224.3
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEecc
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHI 78 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~ 78 (314)
-||... .+|++|||| +++++|++|+|++.|++.+..++++|.|+|++||| ++.|++.+++++.++++|++++.++
T Consensus 87 ~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~i~~~~ 166 (375)
T TIGR01910 87 DPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGVLIPEP 166 (375)
T ss_pred CCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEEEECCC
Confidence 488864 689999999 36999999999999999888899999999999999 5569999999887766899888764
Q ss_pred CCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC------CCCCCeEEEEEE
Q 021336 79 SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET------DPLEARVVTVGF 152 (314)
Q Consensus 79 ~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~------~~~~~~~~~v~~ 152 (314)
.. .+.+.. .++|..+++|+++|+++|++.|+.+.||+..++++|.+|+++..... .....++++++.
T Consensus 167 ~~---~~~v~~----~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~i~~ 239 (375)
T TIGR01910 167 SG---GDNIVI----GHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPITFNPGV 239 (375)
T ss_pred CC---CCceEE----EecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcccccee
Confidence 31 122221 22488999999999999999999999999999999999987643211 123457899999
Q ss_pred EecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccC-CCCccCCHHHHHHHHHHH
Q 021336 153 IDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRH-YPATVNDEKMYEHGKRVG 231 (314)
Q Consensus 153 i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~l~~~l~~~~ 231 (314)
|+||...|+||++|++++++|+.|.++.+++.++|+++++..+...+++++++... ..+ +...+.++++++.+.+++
T Consensus 240 i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 317 (375)
T TIGR01910 240 IKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVV--KWSGPNETPPDSRLVKALEAII 317 (375)
T ss_pred EECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCee--eecCCcCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988765556666554311 122 334567889999999999
Q ss_pred HhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 021336 232 ASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAAL 297 (314)
Q Consensus 232 ~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~ 297 (314)
++.+|.++. ...++|+||++++.+. +|++. +||+.. ..+|++|||+.++++.+++++
T Consensus 318 ~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~v~~~~~~~~~~~ 375 (375)
T TIGR01910 318 KKVRGIEPE--VLVSTGGTDARFLRKAGIPSIV--YGPGDL-----ETAHQVNEYISIKNLVESTKV 375 (375)
T ss_pred HHHhCCCCe--EeeeccchhHHHHHHcCCcEEE--ECCCCc-----cccCCCCceeEHHHHHHHhhC
Confidence 998788764 2467899999999988 99865 677632 359999999999999998864
No 10
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=4.8e-38 Score=289.12 Aligned_cols=285 Identities=19% Similarity=0.224 Sum_probs=226.3
Q ss_pred CCCcccCCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEecc
Q 021336 3 EWEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHI 78 (314)
Q Consensus 3 ~~p~~~~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~ 78 (314)
..||. ..+|++||+| ++++++++|+|++.|++.+.+++++|.|+|++||| ++.|++.++++.. .++|++|++++
T Consensus 119 ~~Pf~-~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~-~~~d~~i~~ep 196 (410)
T PRK06133 119 KQPFR-IDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELIAELA-AQHDVVFSCEP 196 (410)
T ss_pred CCCEE-EECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHHHHHh-ccCCEEEEeCC
Confidence 35776 5789999999 46999999999999999888888999999999999 4569999987643 46799999874
Q ss_pred CCCCCceEEEeccCccccceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCC
Q 021336 79 SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQ 157 (314)
Q Consensus 79 ~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~ 157 (314)
. .+.+.+.. .++|..+++|+++|+++||+ .|+.|.||+..+++++..++++.. .....+++++.|+||.
T Consensus 197 ~--~~~~~v~~----~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~----~~~~~t~~~~~i~gG~ 266 (410)
T PRK06133 197 G--RAKDALTL----ATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD----PAKGTTLNWTVAKAGT 266 (410)
T ss_pred C--CCCCCEEE----eccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC----CCCCeEEEeeEEECCC
Confidence 3 32233322 22488999999999999986 899999999999999999887632 2235689999999999
Q ss_pred CCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCC
Q 021336 158 AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGE 237 (314)
Q Consensus 158 ~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~ 237 (314)
..|+||++|++.+++|+.|.++.+++.++|++++++ ....+++++++.... .+++...+.++++++.+.+++++. |.
T Consensus 267 ~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~-~~ 343 (410)
T PRK06133 267 NRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRFERG-RPPLEANAASRALAEHAQGIYGEL-GR 343 (410)
T ss_pred CCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEeccc-cCCcccCcchHHHHHHHHHHHHHc-CC
Confidence 999999999999999999999999999999999976 234466666655210 222222234457888888888875 76
Q ss_pred CCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 021336 238 PNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 238 ~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 308 (314)
++.......++++|++++... +|++++++|+... .+|++||+++++++..++++|+.++.+|+.+
T Consensus 344 ~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~~------~aH~~nE~i~i~~~~~~~~~~~~~~~~~~~~ 409 (410)
T PRK06133 344 RLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVGF------GAHSNDEYIELNSIVPRLYLLTRMIMELSRD 409 (410)
T ss_pred CccccccCCCCCchHHHHHhcCCCceEecccCCCC------CCCCCCcEEEcccHHHHHHHHHHHHHHhhcC
Confidence 542111357889999999988 8888766777543 4999999999999999999999999999875
No 11
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=7.8e-38 Score=286.98 Aligned_cols=285 Identities=19% Similarity=0.200 Sum_probs=229.0
Q ss_pred CCCCcccC-CCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCCCCccceeeEe
Q 021336 2 VEWEHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGI 76 (314)
Q Consensus 2 ~~~p~~~~-~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~~~d~~i~~ 76 (314)
+..||.+. .+|++||||+ |++++++|+|++.|++.+ +++|+|+|++|||. +.|++++++++.++ +|+++..
T Consensus 94 ~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~~~-~d~~i~~ 169 (394)
T PRK08651 94 VNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGKVT-PDYVIVG 169 (394)
T ss_pred ccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccCCC-CCEEEEe
Confidence 34689876 6899999994 799999999999998775 79999999999995 46999999987653 6888876
Q ss_pred ccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC-------CCCCCeEEE
Q 021336 77 HISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET-------DPLEARVVT 149 (314)
Q Consensus 77 ~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~-------~~~~~~~~~ 149 (314)
++.. .+.+.. .++|..+++|+++|+++|++.|+.|.||+..+++++.+|++...... ......+++
T Consensus 170 ~~~~---~~~i~~----~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (394)
T PRK08651 170 EPSG---LDNICI----GHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYEYDDERGAKPTVT 242 (394)
T ss_pred cCCC---CCceEE----ecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhccccccccccCCCcee
Confidence 5432 112221 23588999999999999999999999999999999999976432111 112345778
Q ss_pred EEE--EecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHH
Q 021336 150 VGF--IDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHG 227 (314)
Q Consensus 150 v~~--i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l 227 (314)
++. |+||...|+||++|++.+++|++|..+.+++++.|++.++..+..++++++++... ..+....+.++++++.+
T Consensus 243 ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~l~~~~ 320 (394)
T PRK08651 243 LGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEITP--FSEAFVTDPDSELVKAL 320 (394)
T ss_pred ecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEEec--ccCCccCCCCCHHHHHH
Confidence 888 99999999999999999999999999999999999999998877778777776521 11222234567899999
Q ss_pred HHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 021336 228 KRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 306 (314)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 306 (314)
.+++++.+|.++. +..+.+++|+++|.+. +|++. +||+.. ..+|++||+++++++.+++++|..++.+|.
T Consensus 321 ~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~i~~~~l~~~~~i~~~~i~~l~ 391 (394)
T PRK08651 321 REAIREVLGVEPK--KTISLGGTDARFFGAKGIPTVV--YGPGEL-----ELAHAPDEYVEVKDVEKAAKVYEEVLKRLA 391 (394)
T ss_pred HHHHHHHhCCCCc--eeeecCcccHHHHhhCCCcEEE--ECCCCh-----HhcCCCCceeEHHHHHHHHHHHHHHHHHhh
Confidence 9999998787653 3467799999999988 99865 577642 359999999999999999999999999986
Q ss_pred cc
Q 021336 307 DN 308 (314)
Q Consensus 307 ~~ 308 (314)
+.
T Consensus 392 ~~ 393 (394)
T PRK08651 392 KG 393 (394)
T ss_pred cC
Confidence 53
No 12
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.1e-37 Score=282.31 Aligned_cols=281 Identities=19% Similarity=0.196 Sum_probs=221.2
Q ss_pred CcccC-CCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC--ccHHHHHHcCC--CCccceeeEe
Q 021336 5 EHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGA--VDKFQGMFGI 76 (314)
Q Consensus 5 p~~~~-~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~--~G~~~l~~~~~--~~~~d~~i~~ 76 (314)
||... .+|++||||+ |++++++|+|++.|++.+..++++|+|+|++|||++ .|++.+++... ..++|+++..
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 88864 6899999993 599999999999999888788999999999999953 48888775311 1257888887
Q ss_pred ccCCCCCce-EEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc-CCCCCCeEEEEEEEe
Q 021336 77 HISPVLPTG-TVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-TDPLEARVVTVGFID 154 (314)
Q Consensus 77 ~~~~~~~~g-~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~-~~~~~~~~~~v~~i~ 154 (314)
++......+ .+. ..++|..+++|+++|+++|++.|+.|.||+..++++|.+|+....+. .....+.+++++.|+
T Consensus 162 ep~~~~~~~~~i~----~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~ 237 (375)
T PRK13009 162 EPTSTERLGDVIK----NGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNID 237 (375)
T ss_pred CCCcccCCCCeEE----EecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEe
Confidence 653221111 121 12348889999999999999999999999999999999998753211 122345689999999
Q ss_pred cCC-CCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHh
Q 021336 155 AGQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGAS 233 (314)
Q Consensus 155 gG~-~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~ 233 (314)
||. ..|+||++|++.+++|++|..+.+++.++|++.++. .++++++++. ....|....++++++.+.+++++
T Consensus 238 ~G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~---~~~~p~~~~~~~~~~~l~~a~~~ 310 (375)
T PRK13009 238 AGTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWT---LSGEPFLTPPGKLVDAVVAAIEA 310 (375)
T ss_pred cCCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEe---cCCCcccCCCcHHHHHHHHHHHH
Confidence 986 789999999999999999999999999999998863 3567777652 11122222248899999999999
Q ss_pred hcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 021336 234 MVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 306 (314)
Q Consensus 234 ~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 306 (314)
.+|.++. +...+++||++++.+. +|++. |||+.. .+|++||+++++++.+++++|+.++.+|+
T Consensus 311 ~~g~~~~--~~~~~g~tda~~~~~~g~p~v~--~Gp~~~------~~H~~~E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 311 VTGITPE--LSTSGGTSDARFIADYGAQVVE--FGPVNA------TIHKVNECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred HhCCCce--eeccCCCccHHHHHHcCCCeEE--eccCcc------cCCCCCCcEEHHHHHHHHHHHHHHHHHHh
Confidence 8888763 3366788999999987 88654 777643 39999999999999999999999999886
No 13
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-38 Score=287.21 Aligned_cols=285 Identities=21% Similarity=0.157 Sum_probs=225.4
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CC-ccHHHHHHc--CCCCccceeeE
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GY-GGAYYMIKE--GAVDKFQGMFG 75 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~-~G~~~l~~~--~~~~~~d~~i~ 75 (314)
-||+.. .+|++|||| ++++++++|.|++.|++.+..++++|.|+|++||| ++ .|+++++++ +.+.+.|++++
T Consensus 99 ~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~~~~~~~~~~d~~i~ 178 (400)
T PRK13983 99 DPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLKKHPELFKKDDLILV 178 (400)
T ss_pred CCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHhhcccccCCCCEEEE
Confidence 488865 579999999 45899999999999999988899999999999999 44 489999987 55666788877
Q ss_pred eccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHH-hhhcc--CCC---CCCeEEE
Q 021336 76 IHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQH-IVSRE--TDP---LEARVVT 149 (314)
Q Consensus 76 ~~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~-~~~~~--~~~---~~~~~~~ 149 (314)
.+ .+.|.+... ...++|..+++|+++|+++|+|.|+.|.||+..+++++..+++ +.... ..+ ....+++
T Consensus 179 ~~--~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 253 (400)
T PRK13983 179 PD--AGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFNAKDPLFDPPYSTFE 253 (400)
T ss_pred ec--CCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhcccccccCCCCcccc
Confidence 44 233444321 1223588999999999999999999999999999999999987 32111 011 1124677
Q ss_pred EEEEecC-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHH
Q 021336 150 VGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGK 228 (314)
Q Consensus 150 v~~i~gG-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~ 228 (314)
++.+.+| ...|+||++|++++++|++|+.+.+.+++.|+++++..+...+.++++..... ..+.+.++.|+++++.+.
T Consensus 254 ~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~v~~l~ 332 (400)
T PRK13983 254 PTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQR-EQAPPPTPPDSEIVKKLK 332 (400)
T ss_pred cceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeec-cCCccCCCCCcHHHHHHH
Confidence 7888877 58999999999999999999999999999999999876655666666654210 123344677899999999
Q ss_pred HHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 021336 229 RVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAIS 304 (314)
Q Consensus 229 ~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~ 304 (314)
+++++.+|.++. +..++|+||++++.+. +|++. +||+.. .+|++||+++++++.+++++|++++.+
T Consensus 333 ~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~--~Gp~~~------~~H~~nE~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 333 RAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVV--WSTLDE------TAHQPNEYAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred HHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEE--eCCccc------cCCCCCceeeHHHHHHHHHHHHHHHhc
Confidence 999998887764 2367788999999877 99876 466543 499999999999999999999998864
No 14
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=1.5e-37 Score=282.68 Aligned_cols=281 Identities=20% Similarity=0.211 Sum_probs=220.2
Q ss_pred CCcccC-CCCccccChh-H--HHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC--ccHHHHHHcC--CCCccceeeE
Q 021336 4 WEHKSK-NNGKMHGCGH-D--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEG--AVDKFQGMFG 75 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G~-d--~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~--~G~~~l~~~~--~~~~~d~~i~ 75 (314)
.||+.. ++|++||||+ | +++++++.|++.|++.+..++++|+|+|++|||++ .|++.+.+.- ....+|++++
T Consensus 78 ~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~ 157 (370)
T TIGR01246 78 PPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIV 157 (370)
T ss_pred CCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEE
Confidence 488864 7899999994 4 89999999999999888788999999999999954 4888876531 1125799988
Q ss_pred eccCCCCCce-EEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc-cCCCCCCeEEEEEEE
Q 021336 76 IHISPVLPTG-TVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR-ETDPLEARVVTVGFI 153 (314)
Q Consensus 76 ~~~~~~~~~g-~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~-~~~~~~~~~~~v~~i 153 (314)
.++....+.+ .+. ..++|..+++|+++|+++|++.|+.+.||+..+++++..++..... ......+.+++++.|
T Consensus 158 ~ep~~~~~~~~~i~----~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i 233 (370)
T TIGR01246 158 GEPSSVKKLGDVIK----NGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNI 233 (370)
T ss_pred cCCCCcccCCceEE----EeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeee
Confidence 7653322222 221 1224889999999999999999999999999999999998765311 112234578999999
Q ss_pred ecCC-CCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHH
Q 021336 154 DAGQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGA 232 (314)
Q Consensus 154 ~gG~-~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~ 232 (314)
+||. ..|+||++|++.+++|++|.++.+++.+.|++.++. .+.+++++.. ....|...+|+++++.+.++++
T Consensus 234 ~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~---~~~~p~~~~~~~~~~~~~~a~~ 306 (370)
T TIGR01246 234 HAGTGANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWS---LSGEPFLTNDGKLIDKAREAIE 306 (370)
T ss_pred ecCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEe---cCCcceeCCCCHHHHHHHHHHH
Confidence 9996 679999999999999999999999999999988753 4666666652 1222323348899999999999
Q ss_pred hhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021336 233 SMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 305 (314)
Q Consensus 233 ~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 305 (314)
+.+|.++. +..+++++|++++.+. +|++. |||+.. .+|++||+++++++.+++++|+.++.+|
T Consensus 307 ~~~g~~~~--~~~~~g~~d~~~~~~~g~p~~~--~Gp~~~------~~H~~~E~i~i~~l~~~~~~~~~~l~~~ 370 (370)
T TIGR01246 307 ETNGIKPE--LSTGGGTSDGRFIALMGAEVVE--FGPVNA------TIHKVNECVSIEDLEKLSDVYQDLLENL 370 (370)
T ss_pred HHhCCCCc--eecCCCCchHHHHHHcCCCEEE--ecCCcc------cCCCCCceeEHHHHHHHHHHHHHHHHhC
Confidence 98887653 3467788999999987 88654 777653 3899999999999999999999998764
No 15
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=3.2e-37 Score=283.25 Aligned_cols=289 Identities=15% Similarity=0.122 Sum_probs=221.0
Q ss_pred CCCcccC--CCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-C-ccHHHHHHcCCCCccceeeE
Q 021336 3 EWEHKSK--NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y-GGAYYMIKEGAVDKFQGMFG 75 (314)
Q Consensus 3 ~~p~~~~--~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~-~G~~~l~~~~~~~~~d~~i~ 75 (314)
..||+.. .+|++||||+ |++++++|+|++.|++.+..++++|.|+|++|||. + .|++.+++++.+.+.|+.++
T Consensus 92 ~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~~~~~ 171 (400)
T TIGR01880 92 HPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALNLGFA 171 (400)
T ss_pred cCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCceEEE
Confidence 4589974 4899999995 49999999999999999888899999999999995 4 39999998876666677777
Q ss_pred eccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc---------cCCCCCCe
Q 021336 76 IHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR---------ETDPLEAR 146 (314)
Q Consensus 76 ~~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~---------~~~~~~~~ 146 (314)
.+.....|.+.. ..+..++|..+++|+++|+++||+.|.. .||+..|++++..|+++... .......+
T Consensus 172 ~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~~-~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 248 (400)
T TIGR01880 172 LDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLME-NTAMEKLEKSVESIRRFRESQFQLLQSNPDLAIGDVT 248 (400)
T ss_pred EcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHHHhhHHHHHHHhcCccccccccc
Confidence 653221222321 1223446899999999999999998654 69999999999887654210 11111247
Q ss_pred EEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCC-CccCCHHHHH
Q 021336 147 VVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYP-ATVNDEKMYE 225 (314)
Q Consensus 147 ~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~l~~ 225 (314)
+++++.|+||...|+||++|++.+|+|++|.++.+++.+.|+++++.. ..++++++.... ..+++ ..+.++++++
T Consensus 249 t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~lv~ 324 (400)
T TIGR01880 249 SVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQHS--GKPLVTPHDDSNPWWV 324 (400)
T ss_pred eeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEeecC--CCCCCCCCCCCCHHHH
Confidence 999999999999999999999999999999999999999999998753 234445543311 11121 2345789999
Q ss_pred HHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 021336 226 HGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAIS 304 (314)
Q Consensus 226 ~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~ 304 (314)
++.+++++. +.+.. +..+.|+||++++.+. +|++. |||+... ...+|++||+++++++.+++++|+.++.+
T Consensus 325 ~l~~a~~~~-~~~~~--~~~~~g~tDa~~~~~~gip~v~--fgp~~~~---~~~aH~~dE~i~i~~l~~~~~~~~~~l~~ 396 (400)
T TIGR01880 325 AFKDAVKEM-GCTFK--PEILPGSTDSRYIRAAGVPALG--FSPMNNT---PVLLHDHNEFLNEAVFLRGIEIYQTLISA 396 (400)
T ss_pred HHHHHHHHc-CCeec--ceeecCcchHHHHHhCCCCeEE--ECCccCC---cccccCCCCceEHHHHHHHHHHHHHHHHH
Confidence 999999996 65432 2467889999999987 99754 6665421 23589999999999999999999999998
Q ss_pred Hh
Q 021336 305 YL 306 (314)
Q Consensus 305 l~ 306 (314)
+.
T Consensus 397 ~~ 398 (400)
T TIGR01880 397 LA 398 (400)
T ss_pred hh
Confidence 75
No 16
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.9e-37 Score=283.94 Aligned_cols=285 Identities=16% Similarity=0.092 Sum_probs=225.4
Q ss_pred CCCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEec
Q 021336 3 EWEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIH 77 (314)
Q Consensus 3 ~~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~ 77 (314)
.-||+.. .+|++|||| +||+++++|+|+++|++.+..++++|.|+|++||| ++.|+..++.+++ ..|++|+.+
T Consensus 119 ~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~e 196 (427)
T PRK06837 119 RPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVHFQSVIEEESTGNGALSTLQRGY--RADACLIPE 196 (427)
T ss_pred cCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCHhHHHHHhcCc--CCCEEEEcC
Confidence 3589865 689999999 35999999999999999988899999999999999 5568888877764 578888765
Q ss_pred cCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc-----C-----CCCCCeE
Q 021336 78 ISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-----T-----DPLEARV 147 (314)
Q Consensus 78 ~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~-----~-----~~~~~~~ 147 (314)
+. .+ .+ . ..++|..+++|+++|+++|++.|+.|.||+..++++|.+|+++.... . ....+.+
T Consensus 197 p~--~~--~i--~--~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t 268 (427)
T PRK06837 197 PT--GE--KL--V--RAQVGVIWFRLRVRGAPVHVREAGTGANAIDAAYHLIQALRELEAEWNARKASDPHFEDVPHPIN 268 (427)
T ss_pred CC--CC--cc--c--cccceeEEEEEEEEeeccccCCcccCcCHHHHHHHHHHHHHHHHHHHhhcccCCCcccCCCCcee
Confidence 32 11 11 1 22358999999999999999999999999999999999997764210 0 1123568
Q ss_pred EEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHh----CCeEEEEEecccccCCCCccCCHHH
Q 021336 148 VTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVH----QCSATIDFLEEKMRHYPATVNDEKM 223 (314)
Q Consensus 148 ~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~l 223 (314)
++++.|+||...|+||++|++.+++|+.|+++.+++.+.|++.++...... +..+++++... ..+...+..|+++
T Consensus 269 ~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~ 347 (427)
T PRK06837 269 FNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAAAARDDRFLSNNPPEVVWSGF-LAEGYVLEPGSEA 347 (427)
T ss_pred EeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHHHHhcChhhhhCCCeEEEEec-ccCCcCCCCCCHH
Confidence 999999999999999999999999999999999999999999998654322 22234433110 1122334567899
Q ss_pred HHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHh-h-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 021336 224 YEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ-R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAV 301 (314)
Q Consensus 224 ~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~ 301 (314)
++.+.+++++.+|.+.. +..+++++|++++.+ . +|++. |||+.. .+|++||+++++++.+++++|+.+
T Consensus 348 ~~~~~~a~~~~~g~~~~--~~~~~g~tDa~~~~~~~gip~v~--~Gp~~~------~~H~~nE~i~i~~l~~~~~~~~~~ 417 (427)
T PRK06837 348 EAALARAHAAVFGGPLR--SFVTTAYTDTRFYGLYYGIPALC--YGPSGE------GIHGFDERVDLESVRKVTKTIALF 417 (427)
T ss_pred HHHHHHHHHHHhCCCCe--eeEEeeccchHHHhccCCCCEEE--ECCCCC------ccCCCCceEEHHHHHHHHHHHHHH
Confidence 99999999998887653 346788999999985 4 99764 787643 399999999999999999999999
Q ss_pred HHHHhcc
Q 021336 302 AISYLDN 308 (314)
Q Consensus 302 l~~l~~~ 308 (314)
+.++|.-
T Consensus 418 l~~~~~~ 424 (427)
T PRK06837 418 VAEWCGV 424 (427)
T ss_pred HHHHhCC
Confidence 9999853
No 17
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=9.1e-37 Score=274.97 Aligned_cols=263 Identities=16% Similarity=0.090 Sum_probs=210.2
Q ss_pred CCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCCCCccceeeEeccCCCCCc
Q 021336 9 KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPT 84 (314)
Q Consensus 9 ~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~~~d~~i~~~~~~~~~~ 84 (314)
..+|++||+| +||++|++|+|+++|++.+ .+|.|+|++|||+ +.|++++++++. ++|++++.+|.. ..
T Consensus 80 ~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~ep~~--~~ 151 (346)
T PRK00466 80 IEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVGEPSN--GT 151 (346)
T ss_pred eeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEcCCCC--CC
Confidence 3689999999 5699999999999998876 3589999999994 579999998864 578888876432 11
Q ss_pred eEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCccccC
Q 021336 85 GTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPE 164 (314)
Q Consensus 85 g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nvip~ 164 (314)
..+. .++|..+++|+++|+++|+|.|+ .||+..+++++.++.+... .....+++++.|+||...|+||+
T Consensus 152 ~i~~-----~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~NvvP~ 220 (346)
T PRK00466 152 DIVV-----EYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVTPA 220 (346)
T ss_pred ceEE-----EeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCcccCC
Confidence 1222 23589999999999999999886 4999999999998876422 22346899999999999999999
Q ss_pred cEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCC
Q 021336 165 IVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTP 244 (314)
Q Consensus 165 ~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~ 244 (314)
+|++++|+|++|+.+.+++.++|++.++. +++++.. ..+....+.++++++.+.+++++. |.++. +.
T Consensus 221 ~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~~~----~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~ 287 (346)
T PRK00466 221 KLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLKIVD----ETPPVKVSINNPVVKALMRALLKQ-NIKPR--LV 287 (346)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEeecc----CCCCcccCCCCHHHHHHHHHHHHh-CCCce--EE
Confidence 99999999999999999999999988753 3444322 222333556789999999999986 87653 33
Q ss_pred CCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhccc
Q 021336 245 VEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDNL 309 (314)
Q Consensus 245 ~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~~ 309 (314)
.++|+||+++|.+..|.++ .|||+.. ..+|++|||++++++.+++++|+.++.+|++++
T Consensus 288 ~~~g~tD~~~~~~~~~~~v-~fGpg~~-----~~aH~~nE~i~i~~l~~~~~~~~~~i~~l~~~~ 346 (346)
T PRK00466 288 RKAGTSDMNILQKITTSIA-TYGPGNS-----MLEHTNQEKITLDEIYIAVKTYMLAIEELWQKS 346 (346)
T ss_pred ecCCcCcHHHHHHhCCCEE-EECCCCc-----ccccCCCceeeHHHHHHHHHHHHHHHHHHHhcC
Confidence 6688999999998854343 3777643 358999999999999999999999999998874
No 18
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1e-36 Score=278.48 Aligned_cols=277 Identities=17% Similarity=0.163 Sum_probs=218.2
Q ss_pred CCCCccc-CCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEe
Q 021336 2 VEWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGI 76 (314)
Q Consensus 2 ~~~p~~~-~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~ 76 (314)
+..||+. .++|++|||| |||+++++|.|++.|++. .++++|.|+|++||| ++.|++++++++.++ .|+++..
T Consensus 91 ~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~-~d~~i~~ 167 (383)
T PRK05111 91 TRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR-PDCAIIG 167 (383)
T ss_pred cCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC-CCEEEEc
Confidence 3468984 5789999999 689999999999999875 367899999999999 556999999887554 5887775
Q ss_pred ccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc----cCCC---CCCeEEE
Q 021336 77 HISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR----ETDP---LEARVVT 149 (314)
Q Consensus 77 ~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~----~~~~---~~~~~~~ 149 (314)
++... ..+ ..++|..+++|+++|+++|++.|+.|.||+..+++++.+++.+... ...+ ...++++
T Consensus 168 ep~~~---~~~-----~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~t~~ 239 (383)
T PRK05111 168 EPTSL---KPV-----RAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAFTVPYPTLN 239 (383)
T ss_pred CCCCC---cee-----ecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccCCCCCCcee
Confidence 53221 111 2235889999999999999999999999999999999998765311 1111 1357899
Q ss_pred EEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCC--CccCCHHHHHHH
Q 021336 150 VGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYP--ATVNDEKMYEHG 227 (314)
Q Consensus 150 v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~l~~~l 227 (314)
++.|+||...|+||++|++.+++|+.|.++.+++.+.|++.++.....+++++++... ...++ ..+.++++++.+
T Consensus 240 i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~ 316 (383)
T PRK05111 240 LGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPL---HPPIPGYECPADHQLVRVV 316 (383)
T ss_pred EeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEecc---ccCCCCcCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999877777777776531 11222 235567888877
Q ss_pred HHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 021336 228 KRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 306 (314)
Q Consensus 228 ~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 306 (314)
.++ +|.++ ...++++|+.++.+. +|++. +||+.. ..+|++||+++++++.+++++|+.++.+|+
T Consensus 317 ~~~----~g~~~----~~~~~~~Da~~~~~~g~p~v~--~G~g~~-----~~~H~~~E~v~~~~l~~~~~i~~~~~~~~~ 381 (383)
T PRK05111 317 EKL----LGHKA----EVVNYCTEAPFIQQLGCPTLV--LGPGSI-----EQAHQPDEYLELSFIKPTRELLRQLIHHFC 381 (383)
T ss_pred HHH----hCCCC----ceeeeeccHHHHHhcCCCEEE--ECCCch-----HhCcCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 654 35443 234578999998877 89776 566542 359999999999999999999999999987
Q ss_pred c
Q 021336 307 D 307 (314)
Q Consensus 307 ~ 307 (314)
.
T Consensus 382 ~ 382 (383)
T PRK05111 382 L 382 (383)
T ss_pred c
Confidence 4
No 19
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=3.2e-36 Score=273.75 Aligned_cols=274 Identities=17% Similarity=0.181 Sum_probs=212.0
Q ss_pred CCcccCCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEeccC
Q 021336 4 WEHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHIS 79 (314)
Q Consensus 4 ~p~~~~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~~ 79 (314)
.||. .++|++|||| |||+++++|+|+++|++.+..++.+|.|+|++||| ++.|++.+++++.. ++|++|+.++.
T Consensus 96 ~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~iv~ep~ 173 (376)
T PRK07473 96 LPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVLVPEPG 173 (376)
T ss_pred CCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEEEeCCC
Confidence 4774 6789999999 78999999999999999887788899999999999 55699999987542 57999988753
Q ss_pred CCCCceEEEeccCccccceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCC
Q 021336 80 PVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQA 158 (314)
Q Consensus 80 ~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~ 158 (314)
.. ..+.+.. ++|..+++|+++|+++||+ .|+.|.||+..+++++.+|+++.. ...+++++.|+||.+
T Consensus 174 ~~-~~~v~~~-----~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~i~gg~~ 241 (376)
T PRK07473 174 RP-DNGVVTG-----RYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGIVHGGQW 241 (376)
T ss_pred CC-CCCEEEE-----CeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEeeEEcCCC
Confidence 21 1133323 2488999999999999997 799999999999999999988632 236899999999999
Q ss_pred CccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCC
Q 021336 159 GNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEP 238 (314)
Q Consensus 159 ~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~ 238 (314)
.|+||++|++++++|.......+++.+++.+.++ ...+++++++... ..+++.....++++++.+.++.+.. |.+
T Consensus 242 ~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~-g~~ 316 (376)
T PRK07473 242 VNCVATTCTGEALSMAKRQADLDRGVARMLALSG---TEDDVTFTVTRGV-TRPVWEPDAGTMALYEKARAIAGQL-GLS 316 (376)
T ss_pred CcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---cCCCeEEEEEccc-cCCCCCCChhHHHHHHHHHHHHHHc-CCC
Confidence 9999999999999999887777777777766543 1234455554210 0122211122346888888776665 876
Q ss_pred CcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021336 239 NVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 305 (314)
Q Consensus 239 ~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 305 (314)
+. ...++++||+++++.. +|++. ++||+.. .+|++|||++++++.+++++|+.++.++
T Consensus 317 ~~--~~~~~g~tDa~~~~~~giP~v~-g~Gpg~~------~~H~~dE~v~i~~l~~~~~vl~~~l~~~ 375 (376)
T PRK07473 317 LP--HGSAGGGSDGNFTGAMGIPTLD-GLGVRGA------DYHTLNEHIEVDSLAERGRLMAGLLATL 375 (376)
T ss_pred Cc--cccCccccHhhhHHhcCCCEEE-eccCCCC------CCCCCCceEecccHHHHHHHHHHHHHhc
Confidence 53 3467889999999987 99765 5777653 3899999999999999999999998753
No 20
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=1.4e-36 Score=278.74 Aligned_cols=285 Identities=15% Similarity=0.093 Sum_probs=219.8
Q ss_pred CCccc-CCCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC--CccHHHHHHcCCCCccceeeEec
Q 021336 4 WEHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG--YGGAYYMIKEGAVDKFQGMFGIH 77 (314)
Q Consensus 4 ~p~~~-~~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~--~~G~~~l~~~~~~~~~d~~i~~~ 77 (314)
.||+. ..+|++||||+ +++++++|+|++.|++.+..++++|.|+|++|||. +.|++++++++.+ ++|++++.+
T Consensus 92 ~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~~-~~d~~i~~e 170 (399)
T PRK13004 92 DPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDKI-KPDFVVITE 170 (399)
T ss_pred CCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcCC-CCCEEEEcc
Confidence 47874 46899999994 59999999999999999888899999999999994 3467788876544 479998876
Q ss_pred cCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc--cCCCCCCeEEEEEEEec
Q 021336 78 ISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR--ETDPLEARVVTVGFIDA 155 (314)
Q Consensus 78 ~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~--~~~~~~~~~~~v~~i~g 155 (314)
+.. ..+. ..++|..+++|+++|+++|++.|+.|.||+..++++|..++.+... ........+++++.|.+
T Consensus 171 ~~~----~~i~----~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~ 242 (399)
T PRK13004 171 PTD----LNIY----RGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLGKGTLTVSDIFS 242 (399)
T ss_pred CCC----CceE----EecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCCCceEEEeeeec
Confidence 431 1221 1235889999999999999999999999999999999999876432 22223346788998887
Q ss_pred C-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecc---------cccCCC--CccCCHHH
Q 021336 156 G-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEE---------KMRHYP--ATVNDEKM 223 (314)
Q Consensus 156 G-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~---------~~~~~~--~~~~d~~l 223 (314)
| .+.|+||++|++++++|++|..+.+++.++|++++.. ...+.++++..... ....+| .++.++++
T Consensus 243 g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 320 (399)
T PRK13004 243 TSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYPTECYFPTWLYPEDHEF 320 (399)
T ss_pred CCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCcccccccccccccccccCCCCHH
Confidence 6 5899999999999999999999999999999988432 12344444321000 001122 24567899
Q ss_pred HHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHh-h-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 021336 224 YEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ-R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAV 301 (314)
Q Consensus 224 ~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~ 301 (314)
++.+.+++++.+|.++. ....++++|++.+.+ . +|++. +||+.. ..+|++||+++++++.+++++|+.+
T Consensus 321 ~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v~--~Gpg~~-----~~aH~~nE~i~i~~l~~~~~~~~~~ 391 (399)
T PRK13004 321 VKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTIG--FGPGKE-----PLAHAPNEYTWKEQLVKAAAMYAAI 391 (399)
T ss_pred HHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEEE--ECCCcc-----cccCCCCceeEHHHHHHHHHHHHHH
Confidence 99999999999887653 235667788877754 5 89764 777542 3599999999999999999999999
Q ss_pred HHHHhcc
Q 021336 302 AISYLDN 308 (314)
Q Consensus 302 l~~l~~~ 308 (314)
+.+||++
T Consensus 392 ~~~~~~~ 398 (399)
T PRK13004 392 PKSLLKK 398 (399)
T ss_pred HHHHhhc
Confidence 9999975
No 21
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=2.7e-36 Score=274.02 Aligned_cols=271 Identities=20% Similarity=0.218 Sum_probs=212.4
Q ss_pred CCCcc-cCCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEec
Q 021336 3 EWEHK-SKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIH 77 (314)
Q Consensus 3 ~~p~~-~~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~ 77 (314)
..||. ..++|++|||| ||++++++|+|++.|++.+ ++++|.|+|++||| ++.|++++++++.+ ++|++++.+
T Consensus 79 ~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~e 155 (364)
T TIGR01892 79 RDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQ--LKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIGE 155 (364)
T ss_pred CCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhcC--cCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEECC
Confidence 46898 46789999999 8899999999999998764 68899999999999 55799999998753 578887754
Q ss_pred cCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC-----CC--CCCeEEEE
Q 021336 78 ISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRET-----DP--LEARVVTV 150 (314)
Q Consensus 78 ~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~-----~~--~~~~~~~v 150 (314)
+ .+.... ..++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..... .. ...+++++
T Consensus 156 p-----~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i 227 (364)
T TIGR01892 156 P-----TRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNI 227 (364)
T ss_pred C-----CCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEE
Confidence 3 222211 123488999999999999999999999999999999999987542110 00 12468999
Q ss_pred EEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHH-HhCCeEEEEEecccccCCCCccCCHHHHHHHHH
Q 021336 151 GFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAA-VHQCSATIDFLEEKMRHYPATVNDEKMYEHGKR 229 (314)
Q Consensus 151 ~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~ 229 (314)
+.|+||...|+||++|++.+++|++|.++.+++.+.|+++++..+. .++++++++... ..+....+.|+++++.+.+
T Consensus 228 ~~i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~v~~~~~ 305 (364)
T TIGR01892 228 GVIQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEVVS--TDPGVNTEPDAELVAFLEE 305 (364)
T ss_pred eeeecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEEcc--CCCCcCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999987542 446666665421 1222234567889988876
Q ss_pred HHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 021336 230 VGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAV 301 (314)
Q Consensus 230 ~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~ 301 (314)
+ +|.++ ...+++||++++.+. +|++. +||+.. ..+|++|||++++++.+++++|+.+
T Consensus 306 ~----~~~~~----~~~~~~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~i~i~~l~~~~~~~~~~ 363 (364)
T TIGR01892 306 L----SGNAP----EVVSYGTEAPQFQELGAEAVV--CGPGDI-----RQAHQPDEYVEIEDLVRCRAVLARL 363 (364)
T ss_pred H----hCCCC----ceecccccHHHHHhCCCcEEE--ECCCCh-----HhCCCCCceeeHHHHHHHHHHHHHh
Confidence 4 34432 245668999999887 99765 666542 3589999999999999999999875
No 22
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.4e-36 Score=272.69 Aligned_cols=266 Identities=14% Similarity=0.080 Sum_probs=213.0
Q ss_pred CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEeccCCCCCce
Q 021336 10 NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHISPVLPTG 85 (314)
Q Consensus 10 ~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~~~~~~~g 85 (314)
.+|++||+| ||+++|++|+|++.|++.. ++++|.|+|++||| ++.|++.++++. ++|++++.++.. +
T Consensus 76 ~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~ep~~----~ 146 (347)
T PRK08652 76 DGVYVYGTGACDAKGGVAAILLALEELGKEF--EDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLEPTD----L 146 (347)
T ss_pred ECCEEEeccchhhhHHHHHHHHHHHHHhhcc--cCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEecCCC----C
Confidence 578999998 6799999999999998653 46799999999999 557999998762 358888776531 2
Q ss_pred EEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCccccCc
Q 021336 86 TVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEI 165 (314)
Q Consensus 86 ~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nvip~~ 165 (314)
.+. ..++|..+++|+++|+++|++.|+.|.||+..+++++..++++......... .+.+++.|.||...|++|++
T Consensus 147 ~i~----~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~-~~~~~~~i~gg~~~nviP~~ 221 (347)
T PRK08652 147 KVA----IAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYFD-PHIGIQEIIGGSPEYSIPAL 221 (347)
T ss_pred cee----eecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhcccC-CCCcceeeecCCCCCccCCc
Confidence 221 2335899999999999999999999999999999999999876432211111 24667778999999999999
Q ss_pred EEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCC
Q 021336 166 VRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPV 245 (314)
Q Consensus 166 ~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~ 245 (314)
|++++++|+++..+.+++.++|++.++. .++++++.. ..+....+.|+++++.+++++++. |.++. +..
T Consensus 222 ~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~----~~~~~~~~~~~~lv~~l~~a~~~~-g~~~~--~~~ 290 (347)
T PRK08652 222 CRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTE----IWDGFELDEDEEIVQLLEKAMKEV-GLEPE--FTV 290 (347)
T ss_pred EEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEec----cCCcccCCCCCHHHHHHHHHHHHh-CCCCC--cCc
Confidence 9999999999999999999999998853 455555433 222333567889999999999999 87653 346
Q ss_pred CCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 246 EMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 246 ~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
++++||++++.+. +|++. |||+.. ..+|++|||++++++.+++++|..++..++.
T Consensus 291 ~~g~tDa~~~~~~gip~v~--~Gpg~~-----~~~H~~nE~i~i~~l~~~~~~l~~~~~~~~~ 346 (347)
T PRK08652 291 MRSWTDAINFRYNGTKTVV--WGPGEL-----DLCHTKFERIDVREVEKAKEFLKALNEILLE 346 (347)
T ss_pred CCccchhHHHHHCCCCEEE--ECCCch-----hhcCCCCceeeHHHHHHHHHHHHHHHHHHhc
Confidence 7789999999888 99765 777642 3599999999999999999999999988874
No 23
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=2.3e-36 Score=277.09 Aligned_cols=282 Identities=15% Similarity=0.118 Sum_probs=216.2
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCCcc--HHHHHHcCCCCccceeeEec
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGG--AYYMIKEGAVDKFQGMFGIH 77 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~~G--~~~l~~~~~~~~~d~~i~~~ 77 (314)
-||... .+|++|||| ||+++|++|+|+++|++.+..++.+|.|++++|||.++| .+.++++..+ .+|++++.+
T Consensus 90 ~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~iv~e 168 (395)
T TIGR03320 90 DPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI-KPEFVVITE 168 (395)
T ss_pred CCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC-CCCEEEEcC
Confidence 388764 689999999 579999999999999998877888999999999995433 4566655433 579988876
Q ss_pred cCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc--CCCCCCeEEEEEEEec
Q 021336 78 ISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE--TDPLEARVVTVGFIDA 155 (314)
Q Consensus 78 ~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~--~~~~~~~~~~v~~i~g 155 (314)
+.. ..+. ..++|..+++|+++|+++|+|.|+.|.||+..+++++..++++.... ....+..+++++.|++
T Consensus 169 p~~----~~i~----~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~t~~v~~i~~ 240 (395)
T TIGR03320 169 PTD----MNIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFF 240 (395)
T ss_pred CCc----cceE----EecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCcCceeeeeeec
Confidence 421 1221 12358899999999999999999999999999999999998764321 1112346899999998
Q ss_pred CC-CCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccc-----------CCC--CccCCH
Q 021336 156 GQ-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMR-----------HYP--ATVNDE 221 (314)
Q Consensus 156 G~-~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~d~ 221 (314)
|. ..|+||++|++.+++|++|+++.+++.+.|++.+.. .+.+++++......+ .+| .++.++
T Consensus 241 g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (395)
T TIGR03320 241 SSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAV----QGAEAKVEMYNYDRPSYTGLVYPTECYFPTWVLPEDH 316 (395)
T ss_pred CCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhh----cCCCceEeeeccCcccccccccccccccCccccCCCC
Confidence 85 789999999999999999999999999999987643 122333332100000 122 246778
Q ss_pred HHHHHHHHHHHhhcCCCCcccCCCCCCCCcH-HHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 021336 222 KMYEHGKRVGASMVGEPNVHLTPVEMGAEDF-SFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHA 299 (314)
Q Consensus 222 ~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~-~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~ 299 (314)
++++++.+++++.+|.++.. ...++++|+ +++.+. +|++. +||+.. ..+|++|||++++++.+++++|+
T Consensus 317 ~~v~~l~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~nE~v~i~~l~~~~~~~~ 387 (395)
T TIGR03320 317 LITKAALETYKRLFGKEPGV--DKWTFSTNGVSIMGRHGIPVIG--FGPGDE-----DQAHAPNEKTWKEDLVRAAAMYA 387 (395)
T ss_pred HHHHHHHHHHHHHhCCCCce--eecceecccceehhhcCCCEEE--ECCCch-----hhccCCCcEEEHHHHHHHHHHHH
Confidence 99999999999998876532 245667777 455666 89764 787653 35999999999999999999999
Q ss_pred HHHHHHhc
Q 021336 300 AVAISYLD 307 (314)
Q Consensus 300 ~~l~~l~~ 307 (314)
.++.+||.
T Consensus 388 ~~~~~~~~ 395 (395)
T TIGR03320 388 AIPTVYLE 395 (395)
T ss_pred HHHHHhhC
Confidence 99999984
No 24
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-36 Score=282.60 Aligned_cols=288 Identities=15% Similarity=0.158 Sum_probs=217.7
Q ss_pred CcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHc----CCCCccceee-
Q 021336 5 EHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKE----GAVDKFQGMF- 74 (314)
Q Consensus 5 p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~----~~~~~~d~~i- 74 (314)
||..+ .+|++|||| |||+++++|.|++.|++.+.+++++|+|+|++||| ++.|++.+.+. +. ++|+++
T Consensus 137 Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l~~~~~--~~~~~~~ 214 (486)
T PRK08262 137 PFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELLKERGV--RLAFVLD 214 (486)
T ss_pred CCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHHHHhcC--CEEEEEe
Confidence 89876 689999999 68999999999999999988899999999999999 55688887753 22 344433
Q ss_pred -----Eecc--CCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc---------
Q 021336 75 -----GIHI--SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSR--------- 138 (314)
Q Consensus 75 -----~~~~--~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~--------- 138 (314)
..++ ....|.+.+ +..++|..+++|+++|+++||+.|+. .||+..++++|.+|+....+
T Consensus 215 ~~~~i~~~~~~~~~~p~~~i----~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~~~~~~~~~~~~~ 289 (486)
T PRK08262 215 EGGAITEGVLPGVKKPVALI----GVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLEDNPLPMRLRGPVAE 289 (486)
T ss_pred CCceecccccCCCCceEEee----EEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhCCCCCccChHHHH
Confidence 1111 112233332 23346899999999999999999999 99999999999998763100
Q ss_pred -------c----------------------------CCCCCCeEEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHH
Q 021336 139 -------E----------------------------TDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYL 183 (314)
Q Consensus 139 -------~----------------------------~~~~~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~ 183 (314)
. ......++++++.|+||...|+||++|++++++|++|+.+.+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~diR~~p~~~~~~i 369 (486)
T PRK08262 290 MFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATVNFRILPGDSVESV 369 (486)
T ss_pred HHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEEEEEeCCCCCHHHH
Confidence 0 00123568999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceE
Q 021336 184 EQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAH 263 (314)
Q Consensus 184 ~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~ 263 (314)
.++|++.++.. ++++++.. ....+.+..+.|+++++.+.+++++.+|.... .+..++++||+++|....|.++
T Consensus 370 ~~~i~~~~~~~----~~~v~~~~--~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~~g~tDa~~~~~~~p~~~ 442 (486)
T PRK08262 370 LAHVRRAVADD----RVEIEVLG--GNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLVVGATDSRHYSGISDNVY 442 (486)
T ss_pred HHHHHHHhccC----ceEEEEec--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-ccceecccccHHHHHHhcCCeE
Confidence 99999988642 44444432 10123344567889999999999999764222 1235678999999998777655
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 264 FYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 264 ~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
.+ ++....++....+|++||+++++++.+++++|+.++.++++
T Consensus 443 ~~-~~~~~gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 443 RF-SPLRLSPEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred EE-CCccCCcccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 33 32221223345689999999999999999999999998875
No 25
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.9e-36 Score=274.95 Aligned_cols=276 Identities=19% Similarity=0.229 Sum_probs=214.2
Q ss_pred CCCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCC--CCccceeeE
Q 021336 3 EWEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGA--VDKFQGMFG 75 (314)
Q Consensus 3 ~~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~--~~~~d~~i~ 75 (314)
..||++. .+|++|||| |||++|++|+|++.|++.+ ++++|.|+|++||| ++.|+++++++.. ..++|+++.
T Consensus 85 ~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i~ 162 (385)
T PRK07522 85 SDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAAP--LRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGCIV 162 (385)
T ss_pred CCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhCC--CCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEEEE
Confidence 4589976 689999999 5899999999999998864 68899999999999 5579999987532 124788887
Q ss_pred eccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCC--C------CCCeE
Q 021336 76 IHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETD--P------LEARV 147 (314)
Q Consensus 76 ~~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~--~------~~~~~ 147 (314)
.++.. ...+ ..++|..+++|+++|+++|++.|+.+.||+..++++|..|+++..+... + ...++
T Consensus 163 ~ep~~---~~~~-----~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~t 234 (385)
T PRK07522 163 GEPTS---MRPV-----VGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPYST 234 (385)
T ss_pred ccCCC---Ceee-----eeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCcce
Confidence 65321 1111 1234889999999999999999999999999999999999876422111 0 11368
Q ss_pred EEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHH------HHHHhCCeEEEEEecccccCCCCc--cC
Q 021336 148 VTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEM------QAAVHQCSATIDFLEEKMRHYPAT--VN 219 (314)
Q Consensus 148 ~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~------~~~~~~~~~~~~~~~~~~~~~~~~--~~ 219 (314)
++++.|+||...|+||++|++.+++|+++..+.+++.+.|++.+++ .+...+++++++. ...+++. +.
T Consensus 235 ~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~~~ 310 (385)
T PRK07522 235 LQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP----LSAYPGLDTAE 310 (385)
T ss_pred eEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe----ccCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999976 2334566676655 2233333 44
Q ss_pred CHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 021336 220 DEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALH 298 (314)
Q Consensus 220 d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~ 298 (314)
++++++.+++++.+ .. .....+++|++++... +|++. +||+.. ..+|++||+++++++.+++++|
T Consensus 311 ~~~~v~~~~~~~~~----~~---~~~~~~~td~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~i~i~~l~~~~~~~ 376 (385)
T PRK07522 311 DAAAARLVRALTGD----ND---LRKVAYGTEAGLFQRAGIPTVV--CGPGSI-----EQAHKPDEFVELAQLAACEAFL 376 (385)
T ss_pred CcHHHHHHHHHhCC----CC---cceEeeecchHHhccCCCCEEE--ECCCCh-----hhCCCCCccccHHHHHHHHHHH
Confidence 57888888765433 22 1245578999999977 89765 666532 3599999999999999999999
Q ss_pred HHHHHHHh
Q 021336 299 AAVAISYL 306 (314)
Q Consensus 299 ~~~l~~l~ 306 (314)
+.++.++.
T Consensus 377 ~~~~~~~~ 384 (385)
T PRK07522 377 RRLLASLA 384 (385)
T ss_pred HHHHHHHh
Confidence 99998764
No 26
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=6.3e-36 Score=276.10 Aligned_cols=286 Identities=16% Similarity=0.080 Sum_probs=222.1
Q ss_pred CCcccC-CCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEecc
Q 021336 4 WEHKSK-NNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHI 78 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~ 78 (314)
-||+.. ++|++||||+ |++++++|+|+++|++.+..++++|.|+|++||| ++.|++++++++. .+|++++.++
T Consensus 100 ~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~ep 177 (421)
T PRK08596 100 NPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQCCERGY--DADFAVVVDT 177 (421)
T ss_pred CCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHHHHhcCC--CCCEEEECCC
Confidence 488864 6899999993 6999999999999999998899999999999999 5579999998864 4788888764
Q ss_pred CCCCCceEEEeccCccccceeEEEEEEEcC----------CCCCCCCCCCCCHHHHHHHHHHHHHHhhhc-----cC--C
Q 021336 79 SPVLPTGTVGSRPGPLLAGSGRFTAVIKGK----------GGHAAMPQDTRDPVLAASFAILTLQHIVSR-----ET--D 141 (314)
Q Consensus 79 ~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~----------~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~-----~~--~ 141 (314)
... .. ..+.|..+++++++|+ .+|++.|+.|.||+..++++|.+|+.+... .. .
T Consensus 178 ~~~---~~------~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 248 (421)
T PRK08596 178 SDL---HM------QGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQSLQELERHWAVMKSYPGF 248 (421)
T ss_pred CCC---cc------ccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHHHHHHHHHHhhcccCccC
Confidence 321 11 1223666667777765 369999999999999999999999875311 01 1
Q ss_pred CCCCeEEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH------hCCeEEEE---Ee--ccc
Q 021336 142 PLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAV------HQCSATID---FL--EEK 210 (314)
Q Consensus 142 ~~~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~------~~~~~~~~---~~--~~~ 210 (314)
....++++++.|+||...|+||++|++.+|+|+.|+++.+++++.|+++++..... ...+++.. .. ...
T Consensus 249 ~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
T PRK08596 249 PPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLRENPPQFKWGGESMIEDRGE 328 (421)
T ss_pred CCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhhCCceeEEecccccccccc
Confidence 12347899999999999999999999999999999999999999999999865321 01122210 00 000
Q ss_pred ccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 021336 211 MRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDED 289 (314)
Q Consensus 211 ~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~ 289 (314)
..+....+.++++++++.+++++.+|.++. +....++||++++... +|++. +||+.. ..+|++||+++++
T Consensus 329 ~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~~H~~~E~v~i~ 399 (421)
T PRK08596 329 IFPSLEIDSEHPAVKTLSSAHESVLSKNAI--LDMSTTVTDGGWFAEFGIPAVI--YGPGTL-----EEAHSVNEKVEIE 399 (421)
T ss_pred cCCCccCCCCchHHHHHHHHHHHHhCCCCe--eeEEeeecchhhhhhcCCCEEE--ECCCcc-----cccCCCCceEEHH
Confidence 112223567889999999999999887652 3456788999999988 99865 566542 3599999999999
Q ss_pred chHHHHHHHHHHHHHHhccc
Q 021336 290 ALPIGAALHAAVAISYLDNL 309 (314)
Q Consensus 290 ~l~~~~~~~~~~l~~l~~~~ 309 (314)
++.+++++|+.++.+||+-+
T Consensus 400 ~~~~~~~~~~~~l~~~~~~~ 419 (421)
T PRK08596 400 QLIEYTKVITAFIYEWCHTK 419 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999755
No 27
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=4.2e-36 Score=275.26 Aligned_cols=283 Identities=15% Similarity=0.097 Sum_probs=216.5
Q ss_pred CcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC--ccHHHHHHcCCCCccceeeEecc
Q 021336 5 EHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAVDKFQGMFGIHI 78 (314)
Q Consensus 5 p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~--~G~~~l~~~~~~~~~d~~i~~~~ 78 (314)
||... .+|++|||| |||+++++|+|++.|++.+..+++++.|++++|||++ .|.+.+++++.+ ++|++++.++
T Consensus 91 Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~i~~ep 169 (395)
T TIGR03526 91 PYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI-KPEFVVITEP 169 (395)
T ss_pred CCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC-CCCEEEecCC
Confidence 88764 689999999 7899999999999999988777889999999999943 356677776544 4799888764
Q ss_pred CCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc-CC-CCCCeEEEEEEEecC
Q 021336 79 SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-TD-PLEARVVTVGFIDAG 156 (314)
Q Consensus 79 ~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~-~~-~~~~~~~~v~~i~gG 156 (314)
.. ..+. ..++|..+++|+++|+++|++.|+.|.||+..+++++.+|+.+.... .+ ..+..+++++.|.+|
T Consensus 170 ~~----~~i~----~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~g 241 (395)
T TIGR03526 170 TD----MNIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFFS 241 (395)
T ss_pred CC----ceEE----EEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCccceeeeeeecC
Confidence 21 1222 12358899999999999999999999999999999999998764321 11 123568999999987
Q ss_pred C-CCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccc---------ccCCC--CccCCHHHH
Q 021336 157 Q-AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEK---------MRHYP--ATVNDEKMY 224 (314)
Q Consensus 157 ~-~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~d~~l~ 224 (314)
. ..|+||++|++++++|++|.++.+++.+.|+++++.. ..+.++++...... ...+| .++.+++++
T Consensus 242 ~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 319 (395)
T TIGR03526 242 SPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ--GAEAEVEMYEYDRPSYTGLVYPTECYFPTWVLPEDHLIT 319 (395)
T ss_pred CCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc--CCcceEEEeccccccccccccccccccCccccCCCCHHH
Confidence 5 8999999999999999999999999999999887532 11233332110000 00122 256788999
Q ss_pred HHHHHHHHhhcCCCCcccCCCCCCCCcHH-HHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 021336 225 EHGKRVGASMVGEPNVHLTPVEMGAEDFS-FYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVA 302 (314)
Q Consensus 225 ~~l~~~~~~~~g~~~~~~~~~~~g~tD~~-~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 302 (314)
+++.+++++.+|..+. ....++++|++ ++.+. +|++. +||+.. ..+|++|||++++++.+++++|+.++
T Consensus 320 ~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~dE~i~i~~l~~~~~~~~~~~ 390 (395)
T TIGR03526 320 KAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FGPGDE-----DQAHAPNEKTWKEDLVKAAAMYAAIP 390 (395)
T ss_pred HHHHHHHHHHhCCCCc--eeeeeeecccceehhhcCCCEEE--ECCcch-----hhccCCCceEEHHHHHHHHHHHHHHH
Confidence 9999999999887653 22456677874 45556 89764 777653 35999999999999999999999999
Q ss_pred HHHhc
Q 021336 303 ISYLD 307 (314)
Q Consensus 303 ~~l~~ 307 (314)
..+|+
T Consensus 391 ~~~~~ 395 (395)
T TIGR03526 391 TVYLQ 395 (395)
T ss_pred HHhcC
Confidence 99874
No 28
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=9.3e-36 Score=278.80 Aligned_cols=286 Identities=15% Similarity=0.153 Sum_probs=217.5
Q ss_pred CCCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CC-ccHHHHHHcCC-CCccceeeE
Q 021336 3 EWEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GY-GGAYYMIKEGA-VDKFQGMFG 75 (314)
Q Consensus 3 ~~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~-~G~~~l~~~~~-~~~~d~~i~ 75 (314)
.-||... ++|++|||| +||+++++|+|++.|++.+..++++|.|+|++||| ++ .|++.++++.. .-++|++|.
T Consensus 122 ~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~~~~~i~ 201 (472)
T PRK09133 122 RDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLIDAEFALN 201 (472)
T ss_pred CCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccCeEEEEE
Confidence 3488865 689999999 46999999999999999888899999999999999 44 68998887642 114677777
Q ss_pred eccCC------CCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc----------
Q 021336 76 IHISP------VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE---------- 139 (314)
Q Consensus 76 ~~~~~------~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~---------- 139 (314)
++.. +.|... .....++|..+++|+++|+++|||.|+. .||+..++++|.+|++...+.
T Consensus 202 -e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~~-~nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~ 276 (472)
T PRK09133 202 -EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPTK-DNAIYRLAAALSRLAAYRFPVMLNDVTRAYF 276 (472)
T ss_pred -CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCCC-CChHHHHHHHHHHHhhCCCCCccCCccHHHH
Confidence 5432 122211 1223446889999999999999999975 899999999999987531000
Q ss_pred ------------------------------------CCCCCCeEEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHH
Q 021336 140 ------------------------------------TDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYL 183 (314)
Q Consensus 140 ------------------------------------~~~~~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~ 183 (314)
......++++++.|+||...|+||++|++++|+|++|+.+.+++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~~~~e~v 356 (472)
T PRK09133 277 KQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPGDTIEAV 356 (472)
T ss_pred HHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCchhHHHH
Confidence 00013568999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhc-CCCCcccCCCCCCCCcHHHHHhh-cCc
Q 021336 184 EQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMV-GEPNVHLTPVEMGAEDFSFYTQR-MPA 261 (314)
Q Consensus 184 ~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~-g~~~~~~~~~~~g~tD~~~~~~~-ip~ 261 (314)
.++|+++++. .+ ++++.... ..+.++.+.+.++++.+++++++.+ |.+.. +..++++||++++.+. +|+
T Consensus 357 ~~~I~~~i~~----~~--v~v~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~--~~~~~ggtDa~~~~~~gip~ 427 (472)
T PRK09133 357 RATLKQVVAD----PA--IKITRIGD-PSPSPASPLRPDIMKAVEKLTAAMWPGVPVI--PSMSTGATDGRYLRAAGIPT 427 (472)
T ss_pred HHHHHHHhcC----CC--EEEEEccC-CCCCCCCCCCcHHHHHHHHHHHHHCCCCcee--ccccccccchHHHHhcCCCc
Confidence 9999998753 23 34432111 1223345667899999999999987 44321 3467889999999887 897
Q ss_pred eEE--EEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 262 AHF--YVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 262 ~~~--~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
+.+ .+||.. ...+|++|||++++++.+++++|+.++.+|++
T Consensus 428 ~~~~~i~gp~~-----~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 428 YGVSGLFGDPD-----DTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred eeecCcccCcc-----cccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 521 134332 24599999999999999999999999999875
No 29
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=6.6e-35 Score=268.60 Aligned_cols=271 Identities=18% Similarity=0.182 Sum_probs=215.3
Q ss_pred ChhHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHHH------------------------HHcCC
Q 021336 17 CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYM------------------------IKEGA 66 (314)
Q Consensus 17 ~G~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~l------------------------~~~~~ 66 (314)
.+++++++++|+|++.|++.+..++++|.|++++|||++ .|++.+ .+.|+
T Consensus 94 ~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~ 173 (414)
T PRK12891 94 YDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGY 173 (414)
T ss_pred ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCC
Confidence 346799999999999999999999999999999999964 266533 34443
Q ss_pred C-------CccceeeEeccCCC-------CCceEEEeccCccccceeEEEEEEEcCCCCCC-CCC-CCCCHHHHHHHHHH
Q 021336 67 V-------DKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQ-DTRDPVLAASFAIL 130 (314)
Q Consensus 67 ~-------~~~d~~i~~~~~~~-------~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~-~~~nAi~~~~~~i~ 130 (314)
. .+.++.+.+|.+++ .+.+.+. .++|..+++|+++|+++|++ .|+ .+.|||..++++|.
T Consensus 174 ~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~~~iv~-----~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~ 248 (414)
T PRK12891 174 AGAEPVGGYPVHAAYELHIEQGAILERAGKTIGVVT-----AGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIA 248 (414)
T ss_pred CcccccccCCCCEEEEEEeCCCHHHHHCCCcEEEEe-----eccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHH
Confidence 1 12346666676653 1223332 33588999999999999998 686 58999999999999
Q ss_pred HHHHhhhccCCCCCCeEEEEEEEecC-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecc
Q 021336 131 TLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEE 209 (314)
Q Consensus 131 ~l~~~~~~~~~~~~~~~~~v~~i~gG-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~ 209 (314)
+++++.... ....+++++.|+|| ...|+||++|++++|+|++|.++.+.+.++|+++++.....++++++++.
T Consensus 249 ~l~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~--- 322 (414)
T PRK12891 249 FLDALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADETGLRADIEQ--- 322 (414)
T ss_pred HHHHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE---
Confidence 998875421 13569999999997 69999999999999999999999999999999999988777788887765
Q ss_pred cccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 021336 210 KMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDED 289 (314)
Q Consensus 210 ~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~ 289 (314)
...++++..|+++++.+++++++. |.+.. ...+++++|++++...+|+++. +||+.. ..+|++||+++++
T Consensus 323 -~~~~~~~~~d~~lv~~l~~a~~~~-G~~~~--~~~~~ggtDa~~~~~giPt~~~-~gp~~~-----~~aH~~dE~v~i~ 392 (414)
T PRK12891 323 -IFGYAPAPFAPGCIDAVRDAARAL-GLSHM--DIVSGAGHDACFAARGAPTGMI-FVPCVD-----GLSHNEAEAITPE 392 (414)
T ss_pred -EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcchHHHHHHHhhCCEEEE-EEcCCC-----CCCCCccccCCHH
Confidence 344556677899999999998765 87653 2467889998888666997554 444432 3489999999999
Q ss_pred chHHHHHHHHHHHHHHhcc
Q 021336 290 ALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 290 ~l~~~~~~~~~~l~~l~~~ 308 (314)
+|..++++|+.++.+|.+.
T Consensus 393 ~l~~~~~il~~~l~~~~~~ 411 (414)
T PRK12891 393 WFAAGADVLLRAVLQSAQE 411 (414)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999998654
No 30
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=4.4e-35 Score=269.64 Aligned_cols=266 Identities=14% Similarity=0.111 Sum_probs=207.5
Q ss_pred ChhHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCCccHHHHHHcCCCCccceeeEeccCCCCCceEEEeccCcccc
Q 021336 17 CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLA 96 (314)
Q Consensus 17 ~G~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~~G~~~l~~~~~~~~~d~~i~~~~~~~~~~g~v~~~~g~~~~ 96 (314)
+++|+++|++|+|++.|++.+..++++|.|+|++|||.+.|++.++.++. +.|+.+.++++ +.|.+... +.
T Consensus 139 ~D~Kgglaa~l~a~~~l~~~~~~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~~---~~g~~~~~----~~ 209 (408)
T PRK05469 139 ADDKAGIAEIMTALEYLIAHPEIKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDGG---PLGELEYE----NF 209 (408)
T ss_pred ccchHHHHHHHHHHHHHHhCCCCCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecCC---CcceEEec----cC
Confidence 55679999999999999988767889999999999996578988865433 35666666543 34544322 24
Q ss_pred ceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCccccCcEEEEEEEecC
Q 021336 97 GSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSL 175 (314)
Q Consensus 97 g~~~~~i~~~G~~~Hss-~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~ 175 (314)
|..+++|+++|+++|++ .|+.|.||+..+++++..|++...+........+++++.|+|| |++|++++++|+.
T Consensus 210 g~~~~~i~v~Gk~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~ 283 (408)
T PRK05469 210 NAASAKITIHGVNVHPGTAKGKMVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDF 283 (408)
T ss_pred ceeEEEEEEeeecCCCCCCcccccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecC
Confidence 77899999999999987 5899999999999999988765432211112245788888776 7999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHh-CCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHH
Q 021336 176 TTEGLLYLEQRIKEVIEMQAAVH-QCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSF 254 (314)
Q Consensus 176 ~~~~~~~~~~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~ 254 (314)
+.++.+.+.++|++++++.+..+ ++++++++........+.+..|+++++.+++++++. |.++. ...+++++|+++
T Consensus 284 ~~e~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~--~~~~~ggtD~~~ 360 (408)
T PRK05469 284 DREGFEARKALMQEIAKKVNAKYGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPI--IKPIRGGTDGSQ 360 (408)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcE--EecCCCcccHHH
Confidence 99999999999999999987766 567777652110111234678899999999999986 87654 236789999999
Q ss_pred HHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 021336 255 YTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 255 ~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 308 (314)
|... +|++. +|++.. .+|++||+++++++..++++|..++..|+..
T Consensus 361 ~~~~giP~v~--~gpG~~------~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 361 LSFMGLPCPN--IFTGGH------NFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred HhhCCCceEE--ECcCcc------cCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 9977 99876 455432 3999999999999999999999999998863
No 31
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=273.05 Aligned_cols=289 Identities=15% Similarity=0.107 Sum_probs=215.1
Q ss_pred CCCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCC-CCccceeeEe
Q 021336 3 EWEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGA-VDKFQGMFGI 76 (314)
Q Consensus 3 ~~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~-~~~~d~~i~~ 76 (314)
.-||+.+ .+|++|||| +||+++++|.|++.|++.+ .++.+|.|+|++||| ++.|++.++++.. +-++|++|+
T Consensus 84 ~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi~- 161 (436)
T PRK06446 84 RDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVIM- 161 (436)
T ss_pred CCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEEE-
Confidence 3589865 689999999 5799999999999988765 678899999999999 5568888877621 124688764
Q ss_pred ccCCCCCceEEEeccCccccceeEEEEEEEc--CCCCCCCCCCCCCHHHHHHHHHHHHHHhhh-----------------
Q 021336 77 HISPVLPTGTVGSRPGPLLAGSGRFTAVIKG--KGGHAAMPQDTRDPVLAASFAILTLQHIVS----------------- 137 (314)
Q Consensus 77 ~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G--~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~----------------- 137 (314)
++....+.+.-... ..++|..+++|+++| +++|||.|+.+.||+..++++|.+|.+...
T Consensus 162 E~~~~~~~~~~~i~--~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 239 (436)
T PRK06446 162 EGAGLDPKGRPQIV--LGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELTEE 239 (436)
T ss_pred CCCCccCCCCeEEE--EecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCCHH
Confidence 43221122211111 233589999999998 999999999999999999999999864310
Q ss_pred -----cc-----------C---------------CCCCCeEEEEEEEecC----CCCccccCcEEEEEEEecCCHHHHHH
Q 021336 138 -----RE-----------T---------------DPLEARVVTVGFIDAG----QAGNIIPEIVRFGGTFRSLTTEGLLY 182 (314)
Q Consensus 138 -----~~-----------~---------------~~~~~~~~~v~~i~gG----~~~nvip~~~~~~~~~R~~~~~~~~~ 182 (314)
+. . .....+++|++.|.|| ...|+||++|++++|+|++|+++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~~~ 319 (436)
T PRK06446 240 ERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDPYK 319 (436)
T ss_pred HHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCHHH
Confidence 00 0 0012468899999887 46799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHh-h-cC
Q 021336 183 LEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ-R-MP 260 (314)
Q Consensus 183 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip 260 (314)
+.+.|++.+++. +..++++... ..+....+.++++++++.+++++.+|.++... ....|++|+++|.+ . +|
T Consensus 320 v~~~l~~~~~~~----~~~~~~~~~~--~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~~-~~~~g~~d~~~~~~~~gip 392 (436)
T PRK06446 320 IFELLKKHLQKV----GFNGEIIVHG--FEYPVRTSVNSKVVKAMIESAKRVYGTEPVVI-PNSAGTQPMGLFVYKLGIR 392 (436)
T ss_pred HHHHHHHHHHHc----CCCeEEEEcC--CcceeecCCCCHHHHHHHHHHHHHhCCCCcee-cCCCCcchHHHHHHHhCCC
Confidence 999999998753 3345554421 11222345678999999999999988865321 23456678888876 4 89
Q ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 021336 261 AAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 306 (314)
Q Consensus 261 ~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 306 (314)
++...+|++.+. ..+|++||+++++++.+++++|..++.++.
T Consensus 393 ~v~~~~g~g~~~----~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 393 DIVSAIGVGGYY----SNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred cceeecccCCCC----cCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 876445554321 359999999999999999999999998764
No 32
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2e-34 Score=260.59 Aligned_cols=268 Identities=16% Similarity=0.091 Sum_probs=198.6
Q ss_pred CCCccc-CCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-C-ccHHHHHHcCCCCccceeeEe
Q 021336 3 EWEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-Y-GGAYYMIKEGAVDKFQGMFGI 76 (314)
Q Consensus 3 ~~p~~~-~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~-~G~~~l~~~~~~~~~d~~i~~ 76 (314)
..||.. ..+|++||+| +|+++|++|+|+.. +.++|.|+|++|||. + .|++.+++++. ++|++++.
T Consensus 83 ~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~~iv~ 153 (364)
T PRK08737 83 ADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEAVLVA 153 (364)
T ss_pred CCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCEEEEc
Confidence 358875 4689999999 56999999999863 357899999999994 4 48888888764 57888887
Q ss_pred ccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCC-CCCCCHHHHHHHHHHHHHHhhh-c---cCCCCCCeEEEEE
Q 021336 77 HISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMP-QDTRDPVLAASFAILTLQHIVS-R---ETDPLEARVVTVG 151 (314)
Q Consensus 77 ~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p-~~~~nAi~~~~~~i~~l~~~~~-~---~~~~~~~~~~~v~ 151 (314)
+|.. . . + ...++|..+++|+++|+++|+|.| +.|.||+..++++|.++.+... . ........+++++
T Consensus 154 Ept~--~-~-~----~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~vg 225 (364)
T PRK08737 154 EPTM--S-E-A----VLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLRFNIG 225 (364)
T ss_pred CCCC--c-e-e----EEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCceEEe
Confidence 5432 1 1 1 123458899999999999999988 6899999999999987654321 1 1112235689999
Q ss_pred EEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccC-CHHHHHHHHHH
Q 021336 152 FIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVN-DEKMYEHGKRV 230 (314)
Q Consensus 152 ~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~l~~~l~~~ 230 (314)
.|+||.+.|+||++|++++|+|+.|..+.+++.++|+++++. ...+++.... ...+++... ..++++.+...
T Consensus 226 ~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 298 (364)
T PRK08737 226 RVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEP----AAATFEETFR---GPSLPSGDIARAEERRLAARD 298 (364)
T ss_pred eEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHH----cCCceEEEec---cCCCCCcccCcchHHHHHHHH
Confidence 999999999999999999999999999999999999877653 2233443321 222333221 23556555444
Q ss_pred HHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 021336 231 GASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAIS 304 (314)
Q Consensus 231 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~ 304 (314)
+.+..|.+.. ...+++||++++.+. +|++. +||+.. ..+|++||++++++|.+++++|..++.+
T Consensus 299 ~~~~~~~~~~---~~~~~~tDa~~~~~~Gip~v~--~GpG~~-----~~aHt~dE~i~i~~l~~~~~~~~~~~~~ 363 (364)
T PRK08737 299 VADALDLPIG---NAVDFWTEASLFSAAGYTALV--YGPGDI-----AQAHTADEFVTLDQLQRYAESVHRIIND 363 (364)
T ss_pred HHhhhcCCCC---ceeccccCHHHHHHcCCCEEE--ECCCCh-----hhccCCCcceeHHHHHHHHHHHHHHhcC
Confidence 4444465431 245668999999987 99876 677642 3599999999999999999999988753
No 33
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=8.9e-35 Score=262.16 Aligned_cols=264 Identities=12% Similarity=0.013 Sum_probs=202.6
Q ss_pred CcccCCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCCCCccceeeEeccCC
Q 021336 5 EHKSKNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISP 80 (314)
Q Consensus 5 p~~~~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~~~d~~i~~~~~~ 80 (314)
|| ...+|++||+| +||+++++++|+++| +..++++|.|++++|||+ +.|...++.++. ++|++++.+|+.
T Consensus 76 p~-~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~Ept~ 149 (348)
T PRK04443 76 PV-RVEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGEPSG 149 (348)
T ss_pred Cc-EeeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeCCCC
Confidence 44 24689999999 579999999999999 346889999999999994 445555655553 589999876532
Q ss_pred CCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhh---ccCCCCCCeEEEEEEEecCC
Q 021336 81 VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVS---RETDPLEARVVTVGFIDAGQ 157 (314)
Q Consensus 81 ~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~---~~~~~~~~~~~~v~~i~gG~ 157 (314)
. ..+ ...++|..+++|+++|+++|||.| +.||+..+++++.+++++.. .........+++++.|. .
T Consensus 150 ~---~~i----~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~ 218 (348)
T PRK04443 150 W---DGI----TLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--S 218 (348)
T ss_pred c---cce----eeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--c
Confidence 1 112 123358999999999999999987 68999999999999987643 11122345678888887 3
Q ss_pred CCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCC
Q 021336 158 AGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGE 237 (314)
Q Consensus 158 ~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~ 237 (314)
..|+||++|++.+|+|++|.++.+++.+.|++.+. +.++++.. ..+....+.++++++.+.+++++.++
T Consensus 219 ~~n~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~- 287 (348)
T PRK04443 219 SSDGLTVEAEMTVGLRLPPGLSPEEAREILDALLP------TGTVTFTG----AVPAYMVSKRTPLARAFRVAIREAGG- 287 (348)
T ss_pred CCCCCCceEEEEEEEccCCCCCHHHHHHHHHHhCC------CcEEEEec----CCCceecCCCCHHHHHHHHHHHHhcC-
Confidence 67999999999999999999999999999998762 23444332 22223356678999999999999854
Q ss_pred CCcccCCCCCCCCcHHHHHh-h-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021336 238 PNVHLTPVEMGAEDFSFYTQ-R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 305 (314)
Q Consensus 238 ~~~~~~~~~~g~tD~~~~~~-~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 305 (314)
++. ....+|++|+++|.+ . +|++. +||+.. ..+|++|||++++++.+++++|+.++.+|
T Consensus 288 ~~~--~~~~~g~tD~~~~~~~~gip~v~--~Gpg~~-----~~~H~~dE~i~i~~l~~~~~~~~~~~~~l 348 (348)
T PRK04443 288 TPR--LKRKTGTSDMNVVAPAWGCPMVA--YGPGDS-----DLDHTPDEHLPLAEYLRAIAVLTDVLERL 348 (348)
T ss_pred Ccc--eeccccCCcHHHHhhhcCCCEEE--ECCCCc-----cccCCCcccccHHHHHHHHHHHHHHHhhC
Confidence 332 235678999999986 3 89764 777642 35899999999999999999999988654
No 34
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=4e-34 Score=259.83 Aligned_cols=259 Identities=17% Similarity=0.122 Sum_probs=195.5
Q ss_pred cCCCCccccCh---hHHHHHHHHHHHHHHHh--cccCCCceEEEEeecCCCCC---ccHHHHHHcCC-CCccceeeEecc
Q 021336 8 SKNNGKMHGCG---HDVHTTILLGAARLLKH--RMDRLKGTVKLVFQPGEEGY---GGAYYMIKEGA-VDKFQGMFGIHI 78 (314)
Q Consensus 8 ~~~~g~~~~~G---~d~~~a~~l~A~~~l~~--~~~~l~~~i~~i~~~dEE~~---~G~~~l~~~~~-~~~~d~~i~~~~ 78 (314)
..++|++|||| +|+++|++|+|++.|++ .+..++++|.|+|++|||.+ .|++.+++++. +.++|++++.++
T Consensus 90 ~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~~d~~iv~Ep 169 (373)
T TIGR01900 90 HPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLAADFAIIGEP 169 (373)
T ss_pred cccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCcccccCCEEEEECC
Confidence 45789999999 45999999999999964 35578999999999999953 49999887642 235788888765
Q ss_pred CCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCC---CCCCeEEEEEEEec
Q 021336 79 SPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETD---PLEARVVTVGFIDA 155 (314)
Q Consensus 79 ~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~---~~~~~~~~v~~i~g 155 (314)
.. ..+ ...++|..+++|+++|+++|++.|+.|.||+..++++|.+|+++...... .....+++++.|+|
T Consensus 170 t~----~~i----~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~t~~v~~I~G 241 (373)
T TIGR01900 170 TG----GGI----EAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYREGLNATFCEG 241 (373)
T ss_pred CC----Ccc----cccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccceEEEEEEeC
Confidence 32 112 12345899999999999999999999999999999999999876432211 11236899999999
Q ss_pred CCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHH--------HHHH---hC-CeEEEEEecccccCCCCccCCHHH
Q 021336 156 GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEM--------QAAV---HQ-CSATIDFLEEKMRHYPATVNDEKM 223 (314)
Q Consensus 156 G~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~--------~~~~---~~-~~~~~~~~~~~~~~~~~~~~d~~l 223 (314)
|.+.|+||++|++++++|+.|.++.+++.+.|++.++. .... .+ .+++++... ..+....+.+.++
T Consensus 242 G~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 319 (373)
T TIGR01900 242 GKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMED--EAGGALPGLGAPL 319 (373)
T ss_pred CCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEcc--cCCCCCCCCCCHH
Confidence 99999999999999999999999999999999765322 2211 11 123333210 1111123457889
Q ss_pred HHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCC
Q 021336 224 YEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVD 287 (314)
Q Consensus 224 ~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~ 287 (314)
++.+.+++++.+|.++. ...++||+++|... +|++. +||++. .++|++|||++
T Consensus 320 ~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~Gpg~~-----~~aH~~dE~v~ 373 (373)
T TIGR01900 320 AQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FGAGDP-----LFAHKHDEQCP 373 (373)
T ss_pred HHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eCCCCh-----hhccCCCCCCC
Confidence 99999999998777652 36788999999877 99875 788653 36999999985
No 35
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=2.7e-34 Score=260.62 Aligned_cols=267 Identities=18% Similarity=0.177 Sum_probs=212.3
Q ss_pred CCCCccccChh-----H--HHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEeccCC
Q 021336 9 KNNGKMHGCGH-----D--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHISP 80 (314)
Q Consensus 9 ~~~g~~~~~G~-----d--~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~~~ 80 (314)
..+|+.||||+ | ++++++|++++.|++.+ .++++|.|+|++||| ++.|++.+.+.+. +.++.+..+++
T Consensus 84 ~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~~~~~- 159 (361)
T TIGR01883 84 VEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYCLDAP- 159 (361)
T ss_pred ecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEEEeCC-
Confidence 35678888884 6 89999999999998876 578899999999999 4469988876532 35676666532
Q ss_pred CCCceEEEeccCccccceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCC
Q 021336 81 VLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAG 159 (314)
Q Consensus 81 ~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~ 159 (314)
.+.+.+.. .++|..+++|+++|+++|++ .|+.|.||+..++++|.+++... .....+++++.++||...
T Consensus 160 -~~~~~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~-----~~~~~~~~i~~i~gG~~~ 229 (361)
T TIGR01883 160 -GEVGNIQL----AAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR-----IDEETTANIGSFSGGVNT 229 (361)
T ss_pred -CCcceEEe----cCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC-----CCCccccccceeecCCcc
Confidence 22343322 22488999999999999986 79999999999999998886421 112467899999999999
Q ss_pred ccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCC
Q 021336 160 NIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPN 239 (314)
Q Consensus 160 nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~ 239 (314)
|+||++|++.+++|..+..+.+.++++|++.++.....++++++++... ..+......|+++++.+.+++++. |.++
T Consensus 230 nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~lv~~l~~a~~~~-g~~~ 306 (361)
T TIGR01883 230 NIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEETRL--IYEGFKIHPQHPLMNIFKKAAKKI-GLKT 306 (361)
T ss_pred CccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEEe--ccccccCCCCCHHHHHHHHHHHHc-CCCc
Confidence 9999999999999999999999999999999988777778887776521 112222356789999999999985 8765
Q ss_pred cccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 021336 240 VHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVA 302 (314)
Q Consensus 240 ~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 302 (314)
. ...++|+||++++.+. +|++. +||+.. .+|++||+++++++.+++++|..++
T Consensus 307 ~--~~~~~g~tD~~~~~~~giP~v~--~G~g~~------~~Hs~~E~v~i~~~~~~~~~~~~~~ 360 (361)
T TIGR01883 307 S--EIFSGGGSDANVLNEKGVPTVN--LSAGYV------HAHTEKETISIEQLVKLAELVIALA 360 (361)
T ss_pred E--EEecCcccHHHHHhhCCCceEE--ECCCcc------cCcCcceeEEHHHHHHHHHHHHHHh
Confidence 3 2467889999999987 99876 455442 4999999999999999999999875
No 36
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.6e-33 Score=259.85 Aligned_cols=269 Identities=21% Similarity=0.182 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHHHHHcCCC-----------------------Cccc
Q 021336 21 VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKEGAV-----------------------DKFQ 71 (314)
Q Consensus 21 ~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~l~~~~~~-----------------------~~~d 71 (314)
++++++|+|++.|++.+..++++|.|++++|||++ .|++.++++... ...|
T Consensus 96 ~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d 175 (412)
T PRK12892 96 LGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALAARCRSDGVPLRDALAAAGLAGR 175 (412)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCCChh
Confidence 68999999999999999899999999999999963 388888742100 0122
Q ss_pred eeeEe-----------ccCCC---CCceE-EEeccCccccceeEEEEEEEcCCCCCC-CCC-CCCCHHHHHHHHHHHHHH
Q 021336 72 GMFGI-----------HISPV---LPTGT-VGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQ-DTRDPVLAASFAILTLQH 134 (314)
Q Consensus 72 ~~i~~-----------~~~~~---~~~g~-v~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~-~~~nAi~~~~~~i~~l~~ 134 (314)
+++.. |.+++ .+.+. ... ...++|..+++|+++|+++|++ .|+ .+.||+..+++++.++++
T Consensus 176 ~~~~~ep~~~~~~~e~~~~~g~~~e~~~~~~~i--~~~~kG~~~~~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~ 253 (412)
T PRK12892 176 PRPAADRARPKGYLEAHIEQGPVLEQAGLPVGV--VTGIVGIWQYRITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDE 253 (412)
T ss_pred hcccccccCccEEEEEEeccCHhHhhCCCcEEE--EEEeccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 22222 22211 01110 011 1234588999999999999997 565 689999999999999988
Q ss_pred hhhccCCCCCCeEEEEEEEecC-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccC
Q 021336 135 IVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRH 213 (314)
Q Consensus 135 ~~~~~~~~~~~~~~~v~~i~gG-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 213 (314)
+..+.. .+.+++++.|+|| .+.|+||++|++++|+|++|.++.+++.+.|+++++..+..+++++++.. ...
T Consensus 254 ~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~e~~~----~~~ 326 (412)
T PRK12892 254 HFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCREIARRRGCRVSVDR----IAE 326 (412)
T ss_pred HHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE----Eec
Confidence 653322 2478999999987 79999999999999999999999999999999999988777788887765 334
Q ss_pred CCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHH
Q 021336 214 YPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 293 (314)
Q Consensus 214 ~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~ 293 (314)
+++...|+++++.+.+++++ +|.++. ...+++++|+++|++.+|+++. +||+.. ..+|++||+++++++.+
T Consensus 327 ~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~-~gp~~~-----~~~H~~~E~v~i~~l~~ 397 (412)
T PRK12892 327 YAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML-FVPSKG-----GISHNPAEDTSPADLAQ 397 (412)
T ss_pred CCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE-EeccCC-----CCCCCCCCCCCHHHHHH
Confidence 55566789999999999999 587654 2467889999999988996553 555432 24899999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 021336 294 GAALHAAVAISYLD 307 (314)
Q Consensus 294 ~~~~~~~~l~~l~~ 307 (314)
++++|+.++.+|+.
T Consensus 398 ~~~il~~~l~~~~~ 411 (412)
T PRK12892 398 GARVLADTLRRLAR 411 (412)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998874
No 37
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-33 Score=260.58 Aligned_cols=272 Identities=19% Similarity=0.205 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHHHHHcCC-----------------------C---
Q 021336 20 DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKEGA-----------------------V--- 67 (314)
Q Consensus 20 d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~l~~~~~-----------------------~--- 67 (314)
+++++++|+|+++|++.+..++++|.|+|++|||++ .|++.+.+... +
T Consensus 97 k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (412)
T PRK12893 97 ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDALARRDADGITLGEALARIGYRGT 176 (412)
T ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHHHhccCCCCCCHHHHHHHcCCCcc
Confidence 589999999999999998889999999999999963 37777764311 0
Q ss_pred -----CccceeeEeccCCCC---CceEEEeccCccccceeEEEEEEEcCCCCCCC-CC-CCCCHHHHHHHHHHHHHHhhh
Q 021336 68 -----DKFQGMFGIHISPVL---PTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-PQ-DTRDPVLAASFAILTLQHIVS 137 (314)
Q Consensus 68 -----~~~d~~i~~~~~~~~---~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~-p~-~~~nAi~~~~~~i~~l~~~~~ 137 (314)
.+.|..+.+|.+++. +.+. .......++|..+++|+++|+++|++. |+ .|.||+..+++++.+|+++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p~~~G~NAI~~a~~~i~~l~~~~~ 255 (412)
T PRK12893 177 ARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTPMAMRRDALVAAARIILAVERIAA 255 (412)
T ss_pred cccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCcchhccCHHHHHHHHHHHHHHHHH
Confidence 012334444433210 0000 001123446899999999999999985 85 799999999999999988753
Q ss_pred ccCCCCCCeEEEEEEEecC-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCC
Q 021336 138 RETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPA 216 (314)
Q Consensus 138 ~~~~~~~~~~~~v~~i~gG-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (314)
+.. ...+++++.|++| ...|+||++|++++|+|++|.++.+++.+.|+++++.....++++++++. ...+++
T Consensus 256 ~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~v~~~~----~~~~~~ 328 (412)
T PRK12893 256 ALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAKIAAARGVQVTVET----VWDFPP 328 (412)
T ss_pred hcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE----EecCCC
Confidence 321 2468899999984 89999999999999999999999999999999999987766788777765 334556
Q ss_pred ccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 021336 217 TVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAA 296 (314)
Q Consensus 217 ~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~ 296 (314)
...|+++++.+.+++++. |.++. ...++++||+++|.+.+|+++. +||+.. ..+|++||++++++|.++++
T Consensus 329 ~~~d~~l~~~l~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~~p~~v~-~gp~~~-----~~~Hs~dE~v~i~~l~~~~~ 399 (412)
T PRK12893 329 VPFDPALVALVEAAAEAL-GLSHM--RMVSGAGHDAMFLARVAPAAMI-FVPCRG-----GISHNEAEDTEPADLAAGAN 399 (412)
T ss_pred cCCCHHHHHHHHHHHHHc-CCCcc--ccCCccHHHHHHHHhhCCEEEE-EeecCC-----CCCCCccccCCHHHHHHHHH
Confidence 677899999999999876 87653 3467789999999988886554 555432 34899999999999999999
Q ss_pred HHHHHHHHHhcc
Q 021336 297 LHAAVAISYLDN 308 (314)
Q Consensus 297 ~~~~~l~~l~~~ 308 (314)
+|+.++.+|+..
T Consensus 400 i~~~ll~~~~~~ 411 (412)
T PRK12893 400 VLLHAVLELAGR 411 (412)
T ss_pred HHHHHHHHhhcc
Confidence 999999998763
No 38
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=1.4e-34 Score=269.62 Aligned_cols=279 Identities=15% Similarity=0.099 Sum_probs=208.7
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEecc
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHI 78 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~ 78 (314)
-||... ++|++|||| +||+++++|+|+++|++.+..++++|+|+|++||| ++.|++++++++. .+|++|..+.
T Consensus 99 ~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~--~~d~~~~~d~ 176 (466)
T TIGR01886 99 DPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDMDYYFKHEE--TPDFGFSPDA 176 (466)
T ss_pred CCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccHHHHHhcCc--CCCEEEECCC
Confidence 588864 789999999 56999999999999999999999999999999999 4579999998764 3676654332
Q ss_pred CCCCCc-----eEEEec---------------------------------cC-------------cccccee--------
Q 021336 79 SPVLPT-----GTVGSR---------------------------------PG-------------PLLAGSG-------- 99 (314)
Q Consensus 79 ~~~~~~-----g~v~~~---------------------------------~g-------------~~~~g~~-------- 99 (314)
+ .|. |..... .+ ..++|..
T Consensus 177 ~--~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~ 254 (466)
T TIGR01886 177 E--FPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESFLADKASLDGSFEIND 254 (466)
T ss_pred C--ceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHHHhhccCceEEEEEeC
Confidence 1 110 100000 00 0122322
Q ss_pred -EEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHH-------------HHhhh-----------ccCCCCCCeEEEEEEEe
Q 021336 100 -RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTL-------------QHIVS-----------RETDPLEARVVTVGFID 154 (314)
Q Consensus 100 -~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l-------------~~~~~-----------~~~~~~~~~~~~v~~i~ 154 (314)
|++|+++|+++|||.|+.|.||+..|++++..+ .+... ........+++|++.|+
T Consensus 255 ~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~S~nvgvI~ 334 (466)
T TIGR01886 255 ESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGIAFHDELMGDLAMNAGMFD 334 (466)
T ss_pred CEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCCcccccCcCceEEEeEEEE
Confidence 789999999999999999999999999988773 22110 01123456799999999
Q ss_pred cCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhh
Q 021336 155 AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASM 234 (314)
Q Consensus 155 gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~ 234 (314)
||.. | ++|++.+|+|++|+++.+++.+.|++.++. ..++++... ...++ ..+.++++++.+.+++++.
T Consensus 335 gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~~--~~~P~-~~~~ds~lv~~l~~a~~~v 402 (466)
T TIGR01886 335 FDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNGH--FEEPH-YVPGSDPLVQTLLKVYEKH 402 (466)
T ss_pred EecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEecc--cCCCc-ccCCCCHHHHHHHHHHHHH
Confidence 9965 4 799999999999999999999999988763 233333210 01222 2456779999999999999
Q ss_pred cCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 235 VGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 235 ~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
+|.+.. +..++++||+++|.+.+|.+. +||+. ...+|++|||++++++.+++++|+.++.+||.
T Consensus 403 ~G~~~~--~~~~~ggTDa~~~~~~i~~gv--~gPG~-----~~~aH~~dE~V~i~el~~a~~iy~~~i~~l~~ 466 (466)
T TIGR01886 403 TGKKGH--EVIIGGGTYGRLLERGVAYGA--MFEGG-----PDVMHQANEFMMLDDLILAAAIYAEAIYELAK 466 (466)
T ss_pred hCCCCc--eeeecCccHHHhccccccccc--ccCCC-----CCCccCCCcceEHHHHHHHHHHHHHHHHHHhC
Confidence 887653 236889999999986576433 55654 34699999999999999999999999999974
No 39
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2e-33 Score=258.91 Aligned_cols=267 Identities=20% Similarity=0.194 Sum_probs=209.3
Q ss_pred hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHHHHHc------------------------CCCC
Q 021336 19 HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKE------------------------GAVD 68 (314)
Q Consensus 19 ~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~l~~~------------------------~~~~ 68 (314)
+++++|++++|+++|++.+..++++|.|+|++|||.+ .|++.++++ + +
T Consensus 93 ~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 170 (413)
T PRK09290 93 GPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDALALRDADGVSFAEALAAIG-Y- 170 (413)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHHHhccCCCCCCHHHHHHHcC-C-
Confidence 4689999999999999998888999999999999963 377766532 2 1
Q ss_pred ccceeeEe--ccC-----------------CCCCceEEEeccCccccceeEEEEEEEcCCCCCC-CC-CCCCCHHHHHHH
Q 021336 69 KFQGMFGI--HIS-----------------PVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MP-QDTRDPVLAASF 127 (314)
Q Consensus 69 ~~d~~i~~--~~~-----------------~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss-~p-~~~~nAi~~~~~ 127 (314)
++|++++. +|+ ++.....+ ...++|..+++|+++|+++|++ .| +.|.|||..+++
T Consensus 171 ~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~~~i----~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~ 246 (413)
T PRK09290 171 DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLPIGV----VTGIVGQRRYRVTFTGEANHAGTTPMALRRDALLAAAE 246 (413)
T ss_pred ChhhccccccCCCCccEEEEEEeccCHHHHHCCCcEEE----EeeeeccEEEEEEEEEECCCCCCCCchhccCHHHHHHH
Confidence 34655543 111 11111112 2344688999999999999998 68 588999999999
Q ss_pred HHHHHHHhhhccCCCCCCeEEEEEEEecC-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE
Q 021336 128 AILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDF 206 (314)
Q Consensus 128 ~i~~l~~~~~~~~~~~~~~~~~v~~i~gG-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~ 206 (314)
++.+|+++..+.. ...+++++.|++| ...|+||++|++++|+|+.|.++.+.+.+.|+++++......++++++..
T Consensus 247 ~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~~~~~~~~~~~~~~e~~~ 323 (413)
T PRK09290 247 IILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRAAAEAIAARRGVEVEIEL 323 (413)
T ss_pred HHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 9999987643221 2468899999975 79999999999999999999999999999999999987767788877765
Q ss_pred ecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCC
Q 021336 207 LEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVV 286 (314)
Q Consensus 207 ~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i 286 (314)
...++++..|+++++.+.+++++. |.++. ....++++|+++|.+.+|++++ ++|... ..+|++||++
T Consensus 324 ----~~~~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~iP~~~~-~gp~~~-----~~~H~~dE~v 390 (413)
T PRK09290 324 ----ISRRPPVPFDPGLVAALEEAAERL-GLSYR--RLPSGAGHDAQILAAVVPTAMI-FVPSVG-----GISHNPAEFT 390 (413)
T ss_pred ----EecCCCccCCHHHHHHHHHHHHHc-CCCcc--ccCCccchHHHHHhccCCEEEE-EeccCC-----CCCCCccccC
Confidence 334555667899999999999776 86543 3467789999999766997554 444332 2489999999
Q ss_pred CCCchHHHHHHHHHHHHHHhc
Q 021336 287 DEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 287 ~~~~l~~~~~~~~~~l~~l~~ 307 (314)
+++++.+++++|+.++.+|+.
T Consensus 391 ~i~~l~~~~~v~~~~l~~l~~ 411 (413)
T PRK09290 391 SPEDCAAGANVLLHALLELAE 411 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999885
No 40
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.3e-34 Score=258.40 Aligned_cols=258 Identities=18% Similarity=0.147 Sum_probs=200.2
Q ss_pred CCCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC---ccHHHHHHcC-CCCccceeeEeccCCC
Q 021336 9 KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY---GGAYYMIKEG-AVDKFQGMFGIHISPV 81 (314)
Q Consensus 9 ~~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~---~G~~~l~~~~-~~~~~d~~i~~~~~~~ 81 (314)
..+|++||||+ ++++|++|+|++.|. +++++|.|+|++|||.+ .|++.+++.. .+.++|++++.++..
T Consensus 83 ~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~~- 157 (352)
T PRK13007 83 REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLEPTD- 157 (352)
T ss_pred eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEecCCC-
Confidence 46899999994 499999999999994 47889999999999953 4888887653 234689999887532
Q ss_pred CCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCC---CCCCeEEEEEEEecCCC
Q 021336 82 LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETD---PLEARVVTVGFIDAGQA 158 (314)
Q Consensus 82 ~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~---~~~~~~~~v~~i~gG~~ 158 (314)
+.+. ..++|..+++|+++|+++|||.|+.+.||+..++++|.+++++..+... .....+++++.|+||..
T Consensus 158 ---~~i~----~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG~~ 230 (352)
T PRK13007 158 ---GVIE----AGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGGVA 230 (352)
T ss_pred ---CceE----eeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecCCc
Confidence 2221 1235889999999999999999999999999999999999876432211 11135789999999999
Q ss_pred CccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCC
Q 021336 159 GNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEP 238 (314)
Q Consensus 159 ~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~ 238 (314)
.|+||++|++++|+|++|..+.+++.+.|++.++.. . ++++.. . ..++ ....++++++.+.++ +|..
T Consensus 231 ~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~----~-~~~~~~--~-~~~~-~~~~~~~~~~~~~~~----~g~~ 297 (352)
T PRK13007 231 GNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGF----A-EVEVTD--L-APGA-RPGLDHPAAAALVAA----VGGE 297 (352)
T ss_pred CccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhccc----c-EEEeec--c-cCCC-CCCCCCHHHHHHHHH----hCCC
Confidence 999999999999999999999999999999887542 2 444432 1 2222 234577888888876 2544
Q ss_pred CcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 021336 239 NVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVA 302 (314)
Q Consensus 239 ~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 302 (314)
+ ....++||++++... +|++. +||+.. ..+|++||+++++++.+++++|+.++
T Consensus 298 ~----~~~~g~td~~~~~~~Gip~v~--~Gpg~~-----~~~H~~~E~v~i~~l~~~~~~~~~~~ 351 (352)
T PRK13007 298 V----RAKYGWTDVARFSALGIPAVN--FGPGDP-----ALAHQRDEHVPVAQITACARILRRWL 351 (352)
T ss_pred C----ccccccchHHHHHhCCCCEEE--eCCCch-----hhccCCCCceEHHHHHHHHHHHHHHh
Confidence 3 245688999999988 99775 677543 35999999999999999999999875
No 41
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=1.4e-33 Score=259.28 Aligned_cols=270 Identities=13% Similarity=0.106 Sum_probs=208.1
Q ss_pred CCCccccCh-------hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCCCCccceeeEeccCCC
Q 021336 10 NNGKMHGCG-------HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPV 81 (314)
Q Consensus 10 ~~g~~~~~G-------~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~~~d~~i~~~~~~~ 81 (314)
.+|++||+| +|+++|++|.|++.|++.+ .++++|.|+|++|||. +.|++.++.+++ ++|+++.+|..
T Consensus 123 ~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~~-- 197 (404)
T PRK13381 123 GEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHGDIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDCC-- 197 (404)
T ss_pred CCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccccHHHHHHhcC--CCCEEEEecCC--
Confidence 356678755 5799999999999998875 5688999999999995 479999877643 37888877643
Q ss_pred CCceEEEeccCccccceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCc
Q 021336 82 LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGN 160 (314)
Q Consensus 82 ~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~n 160 (314)
.+.+.+.. ++|..+++|+++|+++|++ .|+.|.||+..+++++.+|+++..+........+++++.++|+
T Consensus 198 ~~~~i~~~-----~~G~~~~~v~v~Gk~aHa~~~p~~g~NAI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~---- 268 (404)
T PRK13381 198 ELGEVVYE-----NFNAASAEITITGVTAHPMSAKGVLVNPILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN---- 268 (404)
T ss_pred CcceEEEe-----cCcceEEEEEEEeEecCCCCCcccCcCHHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC----
Confidence 23222222 3578899999999999988 5899999999999999999775432221222345777777763
Q ss_pred cccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCC
Q 021336 161 IIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQ-CSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPN 239 (314)
Q Consensus 161 vip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~ 239 (314)
|++|++.+++|+.|.++.+.+.+.|++++++.+..++ +++++++......+...+..|+++++.+++++++. |.++
T Consensus 269 --p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~ 345 (404)
T PRK13381 269 --VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPTARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEP 345 (404)
T ss_pred --cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCe
Confidence 8999999999999999999999999999998876666 56666542110111123567899999999999875 8765
Q ss_pred cccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 021336 240 VHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 306 (314)
Q Consensus 240 ~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 306 (314)
. ...++++||+++|... +|+++ +||+.. .+|++|||++++++.+++++|+.++..+.
T Consensus 346 ~--~~~~~g~tDa~~~~~~giP~v~--~GpG~~------~aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 346 K--VIPMRGGTDGAALSAKGLPTPN--LFTGAH------NFHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred e--eccCCccchHHHHhcCCCCeEE--ECcccc------CCcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 3 2367789999999877 99887 455432 38999999999999999999999998765
No 42
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=3.8e-33 Score=255.61 Aligned_cols=267 Identities=18% Similarity=0.175 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHHHHH------------------------cCC----
Q 021336 21 VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIK------------------------EGA---- 66 (314)
Q Consensus 21 ~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~l~~------------------------~~~---- 66 (314)
.++++.|+|++.|++++..++++|.+++.++||++ .|++.+.. .|+
T Consensus 91 ~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 170 (406)
T TIGR03176 91 FGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRK 170 (406)
T ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 58999999999999999999999999999999964 36666652 011
Q ss_pred ----CCccceeeEeccCCC-------CCceEEEeccCccccceeEEEEEEEcCCCCCCCCCC--CCCHHHHHHHHHHHHH
Q 021336 67 ----VDKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQD--TRDPVLAASFAILTLQ 133 (314)
Q Consensus 67 ----~~~~d~~i~~~~~~~-------~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~--~~nAi~~~~~~i~~l~ 133 (314)
..++++++.+|.+++ .+.|.+... +|..+++|+++|+++|++.|.. +.||+..+++++..++
T Consensus 171 ~~~~~~~~~~~~elHieqG~~Le~~g~~igiv~~~-----~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~ 245 (406)
T TIGR03176 171 APTVRDDIKAFVELHIEQGCVLESEGQSIGVVNAI-----VGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSI 245 (406)
T ss_pred ccccccccceEEEEEECCCcchHHCCCeEEEEeec-----ccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 124678899998764 233444333 4889999999999999996543 4899999999999998
Q ss_pred HhhhccCCCCCCeEEEEEEEe-cCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccc
Q 021336 134 HIVSRETDPLEARVVTVGFID-AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMR 212 (314)
Q Consensus 134 ~~~~~~~~~~~~~~~~v~~i~-gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 212 (314)
++..+. ....+++++.|+ +|...|+||++|++++|+|+++.+..+.+.+.|++.+++.+...+++++++. ..
T Consensus 246 ~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~----~~ 318 (406)
T TIGR03176 246 ERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADEMDITIDIDL----WM 318 (406)
T ss_pred HHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE----Ee
Confidence 764321 234689999999 4789999999999999999999999999999999999998888888888764 22
Q ss_pred CCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchH
Q 021336 213 HYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALP 292 (314)
Q Consensus 213 ~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~ 292 (314)
..++...|+++++.+.+++++. +.+.. ...+++++|+++|.+.+|+++.|.|.... ..|+|+|+++++++.
T Consensus 319 ~~~p~~~d~~lv~~l~~a~~~~-~~~~~--~~~sggg~Da~~~~~~vP~~~ifgp~~~g------~~H~p~E~v~~e~l~ 389 (406)
T TIGR03176 319 DEAPVPMNKEIVAIIEQLAKAE-KLNYR--LMHSGAGHDAQIFAPRVPTAMIFVPSIGG------ISHNPAERTNIEDLV 389 (406)
T ss_pred cCCCCCCCHHHHHHHHHHHHHc-CCCce--ecCcccHHHHHHHHHHCCEEEEEEeCCCC------CCCCccccCCHHHHH
Confidence 2233456899999999999987 54432 34678899999999889987654443322 389999999999999
Q ss_pred HHHHHHHHHHHHHhcc
Q 021336 293 IGAALHAAVAISYLDN 308 (314)
Q Consensus 293 ~~~~~~~~~l~~l~~~ 308 (314)
.++++|+.++.+|+++
T Consensus 390 ~g~~vl~~~l~~l~~~ 405 (406)
T TIGR03176 390 EGVKTLADMLYELAYK 405 (406)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998764
No 43
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-32 Score=253.98 Aligned_cols=272 Identities=19% Similarity=0.173 Sum_probs=207.7
Q ss_pred ChhHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHHHHHc------------------------CC
Q 021336 17 CGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKE------------------------GA 66 (314)
Q Consensus 17 ~G~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~l~~~------------------------~~ 66 (314)
.+++++++++|+|++.|++.+..++++|.|++++|||++ .|++.+.+. |.
T Consensus 92 ~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 171 (414)
T PRK12890 92 YDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGG 171 (414)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCC
Confidence 345689999999999999998888999999999999953 366555432 21
Q ss_pred CCccce-------------eeEeccCCCC---CceEEEeccCccccceeEEEEEEEcCCCCCC-CCC-CCCCHHHHHHHH
Q 021336 67 VDKFQG-------------MFGIHISPVL---PTGTVGSRPGPLLAGSGRFTAVIKGKGGHAA-MPQ-DTRDPVLAASFA 128 (314)
Q Consensus 67 ~~~~d~-------------~i~~~~~~~~---~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~-~~~nAi~~~~~~ 128 (314)
..|. ++.+|.+++. +.+. .......++|..|++|+++|+++|++ .|+ .+.||+..++++
T Consensus 172 --~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~ 248 (414)
T PRK12890 172 --DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAEL 248 (414)
T ss_pred --ChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHH
Confidence 1222 2222222110 0000 00112244688999999999999998 485 558999999999
Q ss_pred HHHHHHhhhccCCCCCCeEEEEEEEecC-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe
Q 021336 129 ILTLQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFL 207 (314)
Q Consensus 129 i~~l~~~~~~~~~~~~~~~~~v~~i~gG-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~ 207 (314)
+.+|+++..+.. ...+++++.|++| ...|+||++|++++|+|+.|.++.+.+.++|++.++......+++++++.
T Consensus 249 i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~- 324 (414)
T PRK12890 249 VTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIELER- 324 (414)
T ss_pred HHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE-
Confidence 999988753321 3578899999974 89999999999999999999999999999999999987777788887765
Q ss_pred cccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCC
Q 021336 208 EEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVD 287 (314)
Q Consensus 208 ~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~ 287 (314)
...++++..|+++++.+.+++++. |.++. ...++|+||+++|.+..|.++. +||+.. ..+|++||+++
T Consensus 325 ---~~~~~~~~~~~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~~~~-~gp~~~-----~~aHs~dE~v~ 392 (414)
T PRK12890 325 ---LSRSEPVPCDPALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPSAMI-FVPCRG-----GISHNPEEAMD 392 (414)
T ss_pred ---eecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCEEEE-EecCCC-----CCCCCcCccCC
Confidence 334556677899999999999885 87653 2367789999999988775543 455432 34899999999
Q ss_pred CCchHHHHHHHHHHHHHHhc
Q 021336 288 EDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 288 ~~~l~~~~~~~~~~l~~l~~ 307 (314)
++++.+++++|+.++.+|.+
T Consensus 393 i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 393 PEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998854
No 44
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=264.47 Aligned_cols=286 Identities=14% Similarity=0.105 Sum_probs=211.6
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCC-CCccceeeEec
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGA-VDKFQGMFGIH 77 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~-~~~~d~~i~~~ 77 (314)
-||+.. ++|++|||| +||++|++|+|++.|++.+..++++|.|++++||| ++.|+..++++.. .-++|++++.+
T Consensus 102 dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~ii~e 181 (456)
T PRK08201 102 PPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNLDSFVEEEKDKLAADVVLISD 181 (456)
T ss_pred CCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccHHHHHHhhHHhccCCEEEEeC
Confidence 488864 689999999 57999999999999988766788999999999999 5668888886531 11468888876
Q ss_pred cCCCCCc-eEEEeccCccccceeEEEEEEEcCCC--CCCCCC-CCCCHHHHHHHHHHHHHHhhhcc--------------
Q 021336 78 ISPVLPT-GTVGSRPGPLLAGSGRFTAVIKGKGG--HAAMPQ-DTRDPVLAASFAILTLQHIVSRE-------------- 139 (314)
Q Consensus 78 ~~~~~~~-g~v~~~~g~~~~g~~~~~i~~~G~~~--Hss~p~-~~~nAi~~~~~~i~~l~~~~~~~-------------- 139 (314)
+....+. ..+ ...++|..+++|+++|+++ |||.|. .+.||+..++++|.+|++...+.
T Consensus 182 ~~~~~~~~~~i----~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 257 (456)
T PRK08201 182 TTLLGPGKPAI----CYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHDEHGTVAVEGFYDGVRPLTP 257 (456)
T ss_pred CCcCCCCCEEE----EEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCCCCCCEecCCcccCCCCCCH
Confidence 5321111 112 2334699999999999998 999765 45799999999999986531000
Q ss_pred ----------------------CCC------------CCCeEEEEEEEecCCC----CccccCcEEEEEEEecCCHHHHH
Q 021336 140 ----------------------TDP------------LEARVVTVGFIDAGQA----GNIIPEIVRFGGTFRSLTTEGLL 181 (314)
Q Consensus 140 ----------------------~~~------------~~~~~~~v~~i~gG~~----~nvip~~~~~~~~~R~~~~~~~~ 181 (314)
... ....+++++.|+||.. .|+||++|++.+|+|+.|+++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~NvVP~~a~~~~diR~~p~~~~e 337 (456)
T PRK08201 258 EEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTVIPAEAHAKITCRLVPDQDPQ 337 (456)
T ss_pred HHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceEECcceEEEEEEEeCCCCCHH
Confidence 000 0134789999988754 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCC---cHHHHHhh
Q 021336 182 YLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAE---DFSFYTQR 258 (314)
Q Consensus 182 ~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~t---D~~~~~~~ 258 (314)
++.+.|+++++... ..+.++++.... ..+....+.++++++++.+++++.+|.++.. ...+++ |+.+....
T Consensus 338 ~v~~~i~~~l~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~~~~l~~a~~~~~g~~~~~---~~~gg~~~~~~~~~~~~ 411 (456)
T PRK08201 338 EILDLIEAHLQAHT-PAGVRVTIRRFD--KGPAFVAPIDHPAIQAAARAYEAVYGTEAAF---TRMGGSIPVVETFSSQL 411 (456)
T ss_pred HHHHHHHHHHHHhC-CCCeEEEEEECC--CcCceecCCCCHHHHHHHHHHHHHhCCCcee---cCCCCcHHHHHHHHHHh
Confidence 99999999987531 233445544311 1222345677899999999999998876531 233444 56666555
Q ss_pred -cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021336 259 -MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 305 (314)
Q Consensus 259 -ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 305 (314)
+|++. +||+.. ...+|++|||++++++.+++++|+.++.++
T Consensus 412 gip~v~--~GpG~~----~~~~H~~nE~v~i~~l~~~~~~l~~~~~~~ 453 (456)
T PRK08201 412 HIPIVL--MGFGLP----SENFHAPNEHFHLENFDKGLRTLVEYWHQL 453 (456)
T ss_pred CCCEEE--ecCCCC----CCCCCCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 89875 566532 135999999999999999999999999877
No 45
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=1e-33 Score=262.07 Aligned_cols=285 Identities=14% Similarity=0.098 Sum_probs=204.6
Q ss_pred CCCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC--ccHHHHHHcC--CCCccceee
Q 021336 3 EWEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEG--AVDKFQGMF 74 (314)
Q Consensus 3 ~~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~--~G~~~l~~~~--~~~~~d~~i 74 (314)
.-||... .+|++|||| +|++++++|+|+++|++.+..++++|.|+|++|||++ .|++.++++. .+...++++
T Consensus 86 ~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~~~~ii 165 (426)
T PRK07906 86 VHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEGVTEAI 165 (426)
T ss_pred cCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccchheEE
Confidence 3588864 689999999 5699999999999999999889999999999999954 4888887753 222333333
Q ss_pred EeccCCC-----CCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc----------
Q 021336 75 GIHISPV-----LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE---------- 139 (314)
Q Consensus 75 ~~~~~~~-----~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~---------- 139 (314)
.++... .+..... ....++|..+++|+++|+++|+|.|+. .||+..++++|.+|++...+.
T Consensus 166 -~e~~~~~~~~~~~~~~~~--i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~ 241 (426)
T PRK07906 166 -SEVGGFSLTVPGRDRLYL--IETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVRAFL 241 (426)
T ss_pred -ECCCceeeccCCCccEEE--EEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHHHHH
Confidence 232110 0101111 123446999999999999999999875 899999999999986531100
Q ss_pred ----------CCCC-------------------CCeEEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHH
Q 021336 140 ----------TDPL-------------------EARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEV 190 (314)
Q Consensus 140 ----------~~~~-------------------~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~ 190 (314)
.++. ..++++++.|+||.+.|+||++|++.+|+|++|+.+ +++.+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~~~ 320 (426)
T PRK07906 242 DGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVDEL 320 (426)
T ss_pred HHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHHHHH
Confidence 0000 135899999999999999999999999999999875 5566666654
Q ss_pred HHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecC
Q 021336 191 IEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTR 269 (314)
Q Consensus 191 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~ 269 (314)
+. .+++++... ..+...++.|+++++.+.+++++.++.... .+....|+||++++.+. +|++. +||+
T Consensus 321 ~~-------~~v~~~~~~--~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~-~~~~~~ggtDa~~~~~~g~p~~~--~gp~ 388 (426)
T PRK07906 321 LG-------PDVEREWVH--RDPALETPFDGPLVDAMNAALLAEDPGARV-VPYMLSGGTDAKAFSRLGIRCYG--FAPL 388 (426)
T ss_pred hC-------CCeEEEEec--CCCCCCCCCCcHHHHHHHHHHHHHCCCCeE-eeeeecccCcHHHHHhcCCceEE--Eecc
Confidence 32 234444321 222333567889999999999988532211 12356678999999987 88654 5664
Q ss_pred CCCCC--CCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 021336 270 NETLK--PFIRLHSPYLVVDEDALPIGAALHAAVAIS 304 (314)
Q Consensus 270 ~~~~~--~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~ 304 (314)
....+ ....+|++||+++++++.+++++|+.++.+
T Consensus 389 ~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 389 RLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred ccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 31000 013599999999999999999999998865
No 46
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.7e-33 Score=258.88 Aligned_cols=270 Identities=14% Similarity=0.099 Sum_probs=204.6
Q ss_pred CCccccChhHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCCccHHHHHHcCCCCccceeeEeccCCCCCceEEEec
Q 021336 11 NGKMHGCGHDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGYGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSR 90 (314)
Q Consensus 11 ~g~~~~~G~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~~G~~~l~~~~~~~~~d~~i~~~~~~~~~~g~v~~~ 90 (314)
++.++||++|+++|++|+|++.|++.+..++++|.|+|++|||.+.|++.+..++. +.++.+.++. .|.|.+...
T Consensus 135 g~~l~G~D~KgglAa~l~A~~~L~e~~~~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~g---ep~g~i~~~ 209 (410)
T TIGR01882 135 GTTLLGADDKAGIAEIMTAADYLINHPEIKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVDG---GPLGELEYE 209 (410)
T ss_pred CCEeecccCHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeCC---CCCCeEEEc
Confidence 45899999999999999999999987444688999999999996678888765443 4566655553 345654332
Q ss_pred cCccccceeEEEEEEEcCCCCCCCC-CCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCccccCcEEEE
Q 021336 91 PGPLLAGSGRFTAVIKGKGGHAAMP-QDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFG 169 (314)
Q Consensus 91 ~g~~~~g~~~~~i~~~G~~~Hss~p-~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nvip~~~~~~ 169 (314)
. .|..+++|+++|+++|++.+ +.+.||+..+..++..+....... .+.-+.+.+++|. .|.+|++|++.
T Consensus 210 ~----~g~~~~~I~v~Gk~aHa~~~~~~g~nAi~~a~~~~~~l~~~~~~~-----~t~~~~g~i~~g~-i~giPd~a~l~ 279 (410)
T TIGR01882 210 T----FSAAAAKITIQGNNVHPGTAKGKMINAAQIAIDLHNLLPEDDRPE-----YTEGREGFFHLLS-IDGTVEEAKLH 279 (410)
T ss_pred c----ccceEEEEEEEEEecCcccChHHHHHHHHHHHHHHHhcCCcCCCc-----cccceeEEEEEEe-EEEecCEEEEE
Confidence 1 36789999999999999965 679999999988876654421111 1111223445553 56699999999
Q ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCC
Q 021336 170 GTFRSLTTEGLLYLEQRIKEVIEMQAAVHQC-SATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMG 248 (314)
Q Consensus 170 ~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g 248 (314)
+++|+.+.++.+.+.+.|+++++..+..+++ .+++++........+.+++++++++.+.+++++. |.++. ...++|
T Consensus 280 ~diR~~~~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~--~~~~~g 356 (410)
T TIGR01882 280 YIIRDFEKENFQERKELMKRIVEKMNNEYGQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMENL-GIEPK--ISPIRG 356 (410)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHHh-CCCCc--ccccce
Confidence 9999999999999999999999998777763 4555442110111234678899999999999986 87653 346788
Q ss_pred CCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 021336 249 AEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 306 (314)
Q Consensus 249 ~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 306 (314)
+||+++|... +|++. +||+.. .+|++|||++++++.+++++|.+++..+.
T Consensus 357 gtDa~~~~~~Gip~~~--~G~G~~------~aHt~dE~v~i~~l~~~~~~~~~li~~~~ 407 (410)
T TIGR01882 357 GTDGSQLSYMGLPTPN--IFAGGE------NMHGRFEYISVDNMVKAVDVIVEIAKLNE 407 (410)
T ss_pred echHHHHHhCCCCCCe--EcCCcc------cCcCCceEEEHHHHHHHHHHHHHHHHHHh
Confidence 9999999988 99876 455442 39999999999999999999999998774
No 47
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=1.5e-32 Score=252.03 Aligned_cols=268 Identities=18% Similarity=0.161 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHHHHHcC-------------C------------C--
Q 021336 21 VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMIKEG-------------A------------V-- 67 (314)
Q Consensus 21 ~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~l~~~~-------------~------------~-- 67 (314)
.+++++|+|++.|++.+..++++|.|++++|||++ .|++.++.+. . +
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 58899999999999999999999999999999952 4777775321 0 0
Q ss_pred ------CccceeeEeccCCCCC---ceEEEeccCccccceeEEEEEEEcCCCCCCC-CC-CCCCHHHHHHHHHHHHHHhh
Q 021336 68 ------DKFQGMFGIHISPVLP---TGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-PQ-DTRDPVLAASFAILTLQHIV 136 (314)
Q Consensus 68 ------~~~d~~i~~~~~~~~~---~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~-p~-~~~nAi~~~~~~i~~l~~~~ 136 (314)
.+.++.+.+|.|++.- .|.. ......++|..|++|+++|+++|++. |+ .+.||+..+++++.+++++.
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~~-~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~ 247 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQP-IGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKA 247 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCCe-EEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 1234566777665311 1110 01112335889999999999999985 53 67999999999999998875
Q ss_pred hccCCCCCCeEEEEEEEecC-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCC
Q 021336 137 SRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYP 215 (314)
Q Consensus 137 ~~~~~~~~~~~~~v~~i~gG-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 215 (314)
.+. ..+.+.+++.|++| ...|+||++|++.+|+|+.|+++.+++.++|++.++..+...+++++++. ...++
T Consensus 248 ~~~---~~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~----~~~~~ 320 (401)
T TIGR01879 248 KRM---GDPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIER----WMDEE 320 (401)
T ss_pred Hhc---CCCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEE----eecCC
Confidence 332 23457899999985 77999999999999999999999999999999999987777788888765 33455
Q ss_pred CccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 021336 216 ATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGA 295 (314)
Q Consensus 216 ~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~ 295 (314)
++..|+++++.+.+++++. |.++. ...++++||+++|.+..|..+ .|||+.. ..+|++||+++++++.+++
T Consensus 321 ~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~fgPg~~-----~~aH~~dE~v~~e~l~~~~ 391 (401)
T TIGR01879 321 PVPCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-IFIPSIN-----GISHNPAEWSNITDCAEGA 391 (401)
T ss_pred CcCCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-EEecCCC-----CCcCCCCccCCHHHHHHHH
Confidence 6678999999999999986 87653 235788999999998855444 3666543 3489999999999999999
Q ss_pred HHHHHHHHHH
Q 021336 296 ALHAAVAISY 305 (314)
Q Consensus 296 ~~~~~~l~~l 305 (314)
++|+.++.++
T Consensus 392 ~vl~~~i~~l 401 (401)
T TIGR01879 392 KVLYLMVYQL 401 (401)
T ss_pred HHHHHHHHhC
Confidence 9999998764
No 48
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=7.9e-33 Score=258.76 Aligned_cols=289 Identities=16% Similarity=0.086 Sum_probs=212.3
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhc-ccCCCceEEEEeecCCC-CCccHHHHHHcCC-CCccceeeEe
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHR-MDRLKGTVKLVFQPGEE-GYGGAYYMIKEGA-VDKFQGMFGI 76 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~-~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~-~~~~d~~i~~ 76 (314)
-||+.. ++|++|||| |||+++++|+|+++|++. +..++++|.|+|++||| ++.|++.+++++. ..++|++|+.
T Consensus 109 ~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~d~~iv~ 188 (469)
T PRK07079 109 SPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEEIGSPGLAEVCRQHREALAADVLIAS 188 (469)
T ss_pred CCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCCccHHHHHHHhHHhcCCCEEEEe
Confidence 689965 689999999 679999999999998754 47889999999999999 5679999988742 1147888887
Q ss_pred ccCCCCCc-eEEEeccCccccceeEEEEEEEcC--CCCCCCC-CCCCCHHHHHHHHHHHHHHhhhc--------------
Q 021336 77 HISPVLPT-GTVGSRPGPLLAGSGRFTAVIKGK--GGHAAMP-QDTRDPVLAASFAILTLQHIVSR-------------- 138 (314)
Q Consensus 77 ~~~~~~~~-g~v~~~~g~~~~g~~~~~i~~~G~--~~Hss~p-~~~~nAi~~~~~~i~~l~~~~~~-------------- 138 (314)
++....+. ..+ ...++|..+++|+++|+ +.||+.+ ..+.||+..+++.|.++.+....
T Consensus 189 e~~~~~~~~~~i----~~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~ 264 (469)
T PRK07079 189 DGPRLSAERPTL----FLGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAA 264 (469)
T ss_pred CCCccCCCCeEE----EEecceEEEEEEEEeeCCCCCCCCccccccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHH
Confidence 64321111 112 22346999999999997 4466632 23469999999999987532100
Q ss_pred --------cCC----------------------CCCCeEEEEEEEecCC---CCccccCcEEEEEEEecCCHHHHHHHHH
Q 021336 139 --------ETD----------------------PLEARVVTVGFIDAGQ---AGNIIPEIVRFGGTFRSLTTEGLLYLEQ 185 (314)
Q Consensus 139 --------~~~----------------------~~~~~~~~v~~i~gG~---~~nvip~~~~~~~~~R~~~~~~~~~~~~ 185 (314)
... .....++|++.|+||. ..|+||++|++++|+|++|+++.+++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~NvVP~~a~~~vdiR~~P~~~~e~v~~ 344 (469)
T PRK07079 265 VRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVNAIPGSARAVCQLRFVVGTDWENLAP 344 (469)
T ss_pred HHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcceEecCceEEEEEEEcCCCCCHHHHHH
Confidence 000 0112478999999994 6899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHh-h-cCceE
Q 021336 186 RIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ-R-MPAAH 263 (314)
Q Consensus 186 ~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~-~-ip~~~ 263 (314)
.|+++++... ..+++++... ..+....+.++++++.+.+++++.+|.++.. .....+++|+++|.+ . +|++.
T Consensus 345 ~l~~~i~~~~---~~~v~~~~~~--~~~p~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~g~~d~~~~~~~~giP~v~ 418 (469)
T PRK07079 345 HLRAHLDAHG---FPMVEVTVER--GSPATRLDPDDPWVRWALASIARTTGKKPAL-LPNLGGSLPNDVFADILGLPTLW 418 (469)
T ss_pred HHHHHHHhcC---CCCeEEEEeC--CCCceecCCCCHHHHHHHHHHHHHhCCCCce-ecCCCcchhHHHHHHHhCCCEEE
Confidence 9999987531 1134554421 1222235677899999999999998876432 124556679888886 4 89764
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 021336 264 FYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 264 ~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 308 (314)
+|+..++ ..+|++|||++++++.+++++|+.++.+|++.
T Consensus 419 --~g~~~~~----~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~ 457 (469)
T PRK07079 419 --VPHSYPA----CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQ 457 (469)
T ss_pred --ecCCCCC----ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 4554332 24799999999999999999999999999764
No 49
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=253.89 Aligned_cols=283 Identities=22% Similarity=0.217 Sum_probs=214.9
Q ss_pred CcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCC---CCccceeeEe
Q 021336 5 EHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGA---VDKFQGMFGI 76 (314)
Q Consensus 5 p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~---~~~~d~~i~~ 76 (314)
||... ++|++|||| +||+++++++|++.|.+.+..++++|.+++++||| ++.++..++.++. ..++|+.+..
T Consensus 99 Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~d~~i~~ 178 (409)
T COG0624 99 PFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRPDYEIVG 178 (409)
T ss_pred CCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCCCEEEeC
Confidence 89865 568999999 56999999999999999888899999999999999 4567777777653 2367888887
Q ss_pred ccC---CCCCceEEEeccCccccceeEEEEEEEcCCCCCCC--CCCCCC----HHHHHHHHHHHHHHhhhccCCCCC-Ce
Q 021336 77 HIS---PVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM--PQDTRD----PVLAASFAILTLQHIVSRETDPLE-AR 146 (314)
Q Consensus 77 ~~~---~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~--p~~~~n----Ai~~~~~~i~~l~~~~~~~~~~~~-~~ 146 (314)
++. .+.+...+ .++|..+++|+++|+++|+|. |+.+.| |+..+.+++..+.++.... .. ..
T Consensus 179 E~~~~~~~~~~~~~------~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~---~~~~~ 249 (409)
T COG0624 179 EPTLESEGGDIIVV------GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEG---FDGPL 249 (409)
T ss_pred CCCCcccCCCeEEE------cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhccccccc---ccCCc
Confidence 651 11222222 345999999999999999997 899999 5555555555544332211 12 35
Q ss_pred EEEEEEEecCCC--------CccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCcc
Q 021336 147 VVTVGFIDAGQA--------GNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATV 218 (314)
Q Consensus 147 ~~~v~~i~gG~~--------~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (314)
+++++.+.++.. .|+||++|++.+++|+.|..+.+++.+.|++.++......++++++... ...+..+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~ 327 (409)
T COG0624 250 GLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPG--LGEPPLPVP 327 (409)
T ss_pred cccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEeccc--cCCccccCC
Confidence 666776666554 5999999999999999999999999999999998764434555555420 023344567
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 021336 219 NDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAAL 297 (314)
Q Consensus 219 ~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~ 297 (314)
.++++++++.+++++.+|.+.. ....++++|+.+++.. +| + ..|||+.. ..+|++|||++++++.+++++
T Consensus 328 ~~~~~v~~l~~~~~~~~g~~~~--~~~~G~~~da~~~~~~~~~-~-~~fgp~~~-----~~~H~~~E~v~i~~l~~~~~~ 398 (409)
T COG0624 328 GDSPLVAALAEAAEELLGLPPE--VSTGGGTHDARFFARLGIP-A-VIFGPGDI-----GLAHQPNEYVELEDLVKGAKV 398 (409)
T ss_pred CchHHHHHHHHHHHHhhCCCce--ecCCCCcchHHHHHhcCCe-e-EEECCCCc-----ccccCCCceeeHHHHHHHHHH
Confidence 7899999999999998777632 2344467999999988 68 3 34777663 359999999999999999999
Q ss_pred HHHHHHHHhc
Q 021336 298 HAAVAISYLD 307 (314)
Q Consensus 298 ~~~~l~~l~~ 307 (314)
|++++.+|+.
T Consensus 399 ~~~~l~~l~~ 408 (409)
T COG0624 399 LARLLYELAE 408 (409)
T ss_pred HHHHHHHHhc
Confidence 9999999875
No 50
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=4.2e-33 Score=260.28 Aligned_cols=280 Identities=15% Similarity=0.122 Sum_probs=201.8
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCcccee-----
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGM----- 73 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~----- 73 (314)
-||+.. .+|++||+| +||+++++++|++.|++.+..++++|.|+|++||| ++.|++++++++. .+++.
T Consensus 100 ~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~~~l~~~~~--~~~~~~~~d~ 177 (466)
T PRK07318 100 DPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCMDYYFEHEE--APDFGFSPDA 177 (466)
T ss_pred CCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchhHHHHHHhCC--CCCEEEEeCC
Confidence 488854 689999999 67999999999999999998889999999999999 4569999998642 12221
Q ss_pred ----eEeccC-----------------------CCCCceEE------Eec---------------cCccccce-----eE
Q 021336 74 ----FGIHIS-----------------------PVLPTGTV------GSR---------------PGPLLAGS-----GR 100 (314)
Q Consensus 74 ----i~~~~~-----------------------~~~~~g~v------~~~---------------~g~~~~g~-----~~ 100 (314)
+..++. ++.+.+.+ ... ....++|. .|
T Consensus 178 ~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~kG~~~~~~~~ 257 (466)
T PRK07318 178 EFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENGLKGELEEEGGK 257 (466)
T ss_pred CCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcCceEEEEecCCE
Confidence 211110 00011100 000 00022343 47
Q ss_pred EEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHH------hh----h--------------ccCCCCCCeEEEEEEEecC
Q 021336 101 FTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQH------IV----S--------------RETDPLEARVVTVGFIDAG 156 (314)
Q Consensus 101 ~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~------~~----~--------------~~~~~~~~~~~~v~~i~gG 156 (314)
++|+++|+++|+|.|+.|.|||..|+++|.+|+. +. . ......+..++|++.|+||
T Consensus 258 ~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~nvg~i~gg 337 (466)
T PRK07318 258 LVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDVMGDLTMNVGVFSFD 337 (466)
T ss_pred EEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCCccCeEEEeeEEEEe
Confidence 9999999999999999999999999999999863 10 0 0111224568999999998
Q ss_pred CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcC
Q 021336 157 QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVG 236 (314)
Q Consensus 157 ~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g 236 (314)
... +|++.+|+|++|+.+.+++.+.|++.++. .++++++.. ..+....+.++++++.+++++++.+|
T Consensus 338 ~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~~~~~~~~----~~~p~~~~~d~~lv~~l~~a~~~~~g 404 (466)
T PRK07318 338 EEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TGVELSEHE----HQKPHYVPKDDPLVKTLLKVYEKQTG 404 (466)
T ss_pred cCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cCeEEEEcc----CCCceeeCCCCHHHHHHHHHHHHHhC
Confidence 532 79999999999999999999999988654 343333221 11111245688999999999999878
Q ss_pred CCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 237 EPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 237 ~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
.+.. ...++|+||++++...+| +||..+ |....+|++|||++++++.+++++|+.++.+|++
T Consensus 405 ~~~~--~~~~~ggtDa~~~~~~i~-----~Gp~~p--g~~~~aH~~dE~v~i~~l~~~~~v~~~~l~~~~~ 466 (466)
T PRK07318 405 LKGE--EQVIGGGTYARLLKRGVA-----FGAMFP--GSEDTMHQANEYIEIDDLIKAAAIYAEAIYELAK 466 (466)
T ss_pred CCCC--eeEEcchHhHhhCCCeEE-----eCCCCC--CCCCCCcCCCcceeHHHHHHHHHHHHHHHHHHhC
Confidence 7653 335688999999865343 454432 1234599999999999999999999999999875
No 51
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=2e-32 Score=255.75 Aligned_cols=288 Identities=16% Similarity=0.112 Sum_probs=211.7
Q ss_pred CCcccC-CCC-----ccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCC-CCccce
Q 021336 4 WEHKSK-NNG-----KMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGA-VDKFQG 72 (314)
Q Consensus 4 ~p~~~~-~~g-----~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~-~~~~d~ 72 (314)
-||... ++| ++|||| +||+++++|+|+++|++.+..++++|.|+|++||| ++.|.+.++++.. ..++|+
T Consensus 105 ~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~ 184 (464)
T PRK09104 105 PPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESGSPSLVPFLEANAEELKADV 184 (464)
T ss_pred CCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccCCccHHHHHHhhHHhcCCCE
Confidence 488864 343 599999 56999999999999999877788999999999999 5567887776532 125789
Q ss_pred eeEeccCCCCC-ceEEEeccCccccceeEEEEEEEc--CCCCCCC-CCCCCCHHHHHHHHHHHHHHhhhcc---------
Q 021336 73 MFGIHISPVLP-TGTVGSRPGPLLAGSGRFTAVIKG--KGGHAAM-PQDTRDPVLAASFAILTLQHIVSRE--------- 139 (314)
Q Consensus 73 ~i~~~~~~~~~-~g~v~~~~g~~~~g~~~~~i~~~G--~~~Hss~-p~~~~nAi~~~~~~i~~l~~~~~~~--------- 139 (314)
+|+.++....+ ...+. ..++|..+++|+++| +++|||. |+.+.||+..+++++.+|.+.....
T Consensus 185 ~iv~E~~~~~~~~~~i~----~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l~~l~~~~~~i~~~~~~~~~ 260 (464)
T PRK09104 185 ALVCDTGMWDRETPAIT----TSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRILAGLHDETGRVTLPGFYDGV 260 (464)
T ss_pred EEEeCCCCCCCCCeEEE----eecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHHHhccCCCCCEeCCccccCC
Confidence 98876422111 12222 234599999999999 6899995 6889999999999999986521000
Q ss_pred ---------------------------CCC------------CCCeEEEEEEEecCC----CCccccCcEEEEEEEecCC
Q 021336 140 ---------------------------TDP------------LEARVVTVGFIDAGQ----AGNIIPEIVRFGGTFRSLT 176 (314)
Q Consensus 140 ---------------------------~~~------------~~~~~~~v~~i~gG~----~~nvip~~~~~~~~~R~~~ 176 (314)
..+ ...++++++.|+||. ..|+||++|++++|+|++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~nvvP~~~~~~~diR~~p 340 (464)
T PRK09104 261 EELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGEGFKTVIPAEASAKVSFRLVG 340 (464)
T ss_pred CCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCCCCccEecCceEEEEEEEeCC
Confidence 000 113678999999985 4699999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCC-cHHHH
Q 021336 177 TEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAE-DFSFY 255 (314)
Q Consensus 177 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~t-D~~~~ 255 (314)
+++.+++.+.|+++++... ..+.++++.... ..+...++.++++++.+.+++++.+|.++.. ...++++ |++.|
T Consensus 341 ~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~--~~~~g~~~~~~~~ 415 (464)
T PRK09104 341 GQDPAKIREAFRAYVRARL-PADCSVEFHDHG--GSPAIALPYDSPALAAAKAALSDEWGKPAVL--IGSGGSIPIVGDF 415 (464)
T ss_pred CCCHHHHHHHHHHHHHHhC-CCCeEEEEEecC--CCCceECCCCCHHHHHHHHHHHHHhCCCcee--cCCCCcHHHHHHH
Confidence 9999999999999987531 123344443211 2233346778999999999999998876532 2344443 45666
Q ss_pred Hhh--cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 021336 256 TQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 306 (314)
Q Consensus 256 ~~~--ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 306 (314)
.+. +|++.+++|+.. ..+|++|||++++++.+++++|+.++..++
T Consensus 416 ~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 416 KRILGMDSLLVGFGLDD------DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred HHHhCCCEEEecCCCCC------CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 653 898764444322 359999999999999999999999999886
No 52
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=259.01 Aligned_cols=284 Identities=13% Similarity=0.096 Sum_probs=209.8
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEecc
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHI 78 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~ 78 (314)
-||... ++|++||+| +|++++++++|++.|++.+.+++++|+|+|++||| ++.|++.+++++. .+++.+.++.
T Consensus 136 ~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~--~~~~~~~~D~ 213 (520)
T PRK06156 136 DPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYT--PPDYNITLDA 213 (520)
T ss_pred CCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHHHhcC--CCCeEEeeCC
Confidence 688865 688999999 57999999999999999998888999999999999 5679999988753 3455443321
Q ss_pred -------CCCC-------------------------------Cce-EEEeccC-----------------cccccee---
Q 021336 79 -------SPVL-------------------------------PTG-TVGSRPG-----------------PLLAGSG--- 99 (314)
Q Consensus 79 -------~~~~-------------------------------~~g-~v~~~~g-----------------~~~~g~~--- 99 (314)
+++. |.. ....... ..+.|..
T Consensus 214 ~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 293 (520)
T PRK06156 214 EYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVKRHGGGFSID 293 (520)
T ss_pred CCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHhhcccCceEE
Confidence 1110 000 0000000 0011333
Q ss_pred ------EEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhh---------------------------ccCCCCCCe
Q 021336 100 ------RFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVS---------------------------RETDPLEAR 146 (314)
Q Consensus 100 ------~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~---------------------------~~~~~~~~~ 146 (314)
|++|+++|+++|+|.|+.|.|||..+++++..+++... ......+..
T Consensus 294 ~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~ 373 (520)
T PRK06156 294 FKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPL 373 (520)
T ss_pred EEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCc
Confidence 89999999999999999999999999999999875210 001112445
Q ss_pred EEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHH
Q 021336 147 VVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEH 226 (314)
Q Consensus 147 ~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 226 (314)
+++++.|.+|. ++|++++|+|++|+.+.+++.+.|++.++......++++++... ..+......++++++.
T Consensus 374 t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~---~~~p~~~~~d~~lv~~ 444 (520)
T PRK06156 374 TLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYY---WGEPMVRDPKGPWLKT 444 (520)
T ss_pred EEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeec---CCCceeeCCCCHHHHH
Confidence 77888888775 68999999999999999999999999998765556666665431 1122234557899999
Q ss_pred HHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHh
Q 021336 227 GKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYL 306 (314)
Q Consensus 227 l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~ 306 (314)
+.+++++.+|.++. +..+.|+||++++. |+ ..|||..+ |....+|++|||++++++.+++++|+.++.+|+
T Consensus 445 l~~a~~~~~G~~~~--~~~~~ggTDa~~~~---~~--v~fGP~~~--g~~~~aHt~dE~V~ie~l~~~~~i~~~~l~~l~ 515 (520)
T PRK06156 445 LLDVFGHFTGLDAK--PVAIAGSTNAKLFP---NA--VSFGPAMP--GVKYTGHTENEFKTVEQFMLDLQMYTEMLIRIG 515 (520)
T ss_pred HHHHHHHHhCCCCc--eeeecChhhhhhCC---cc--EEEcCCCC--CCCCCCcCcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999887653 34678899998874 33 34787643 223458999999999999999999999999998
Q ss_pred c
Q 021336 307 D 307 (314)
Q Consensus 307 ~ 307 (314)
+
T Consensus 516 ~ 516 (520)
T PRK06156 516 N 516 (520)
T ss_pred c
Confidence 6
No 53
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=1.4e-32 Score=246.77 Aligned_cols=261 Identities=13% Similarity=0.026 Sum_probs=198.7
Q ss_pred CCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCCCCccceeeEeccCCCCCc
Q 021336 9 KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPT 84 (314)
Q Consensus 9 ~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~~~d~~i~~~~~~~~~~ 84 (314)
..+|++||+| +|+++|++|+|++.|++.+ .+|.|++++|||+ +.|++++++++. .+++++.++.. .
T Consensus 70 ~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~ept~---~ 139 (336)
T TIGR01902 70 IEGGLLYGRGAVDAKGPLIAMIFATWLLNEKG----IKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVGEPSG---A 139 (336)
T ss_pred EeCCEEEEecccCCCcHHHHHHHHHHHHHhCC----CcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEecCCC---C
Confidence 3689999999 5699999999999998654 5899999999994 579999988743 35777766432 1
Q ss_pred eEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCccccC
Q 021336 85 GTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPE 164 (314)
Q Consensus 85 g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nvip~ 164 (314)
+.+ ...++|..+++++++|+++|++.|. ||+..+..+++.+.+...... .....+++++.++||...|+||+
T Consensus 140 ~~i----~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~gg~~~nvIP~ 211 (336)
T TIGR01902 140 EGI----TLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQPE-NYDKPSIVPTIIRFGESYNDTPA 211 (336)
T ss_pred cce----eeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhcccc-CCCCCcceeEEEEccCCCcCCCc
Confidence 122 1233599999999999999999875 488899999988873221111 11234788899999999999999
Q ss_pred cEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCC
Q 021336 165 IVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTP 244 (314)
Q Consensus 165 ~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~ 244 (314)
+|++++|+|++|.++.+++.++|++ ....++++.. ..+....+.|+++++.+.+++++. +.++. ..
T Consensus 212 ~a~~~idiR~~p~~~~~~~~~~i~~-------~~~~~~~~~~----~~~p~~~~~~~~lv~~~~~a~~~~-~~~~~--~~ 277 (336)
T TIGR01902 212 KLELHFDLRYPPNNKPEEAIKEITD-------KFPICLEIVD----ETPPYKVSRNNPLVRAFVRAIRKQ-GMKPR--LK 277 (336)
T ss_pred eEEEEEEEeeCCCCCHHHHHHHHHh-------ccCceEEEEe----ccCceecCCCCHHHHHHHHHHHHc-CCCeE--Ee
Confidence 9999999999999999988877765 1233443322 222222456789999999999997 65542 23
Q ss_pred CCCCCCcHHHHHhh--cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 021336 245 VEMGAEDFSFYTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 245 ~~~g~tD~~~~~~~--ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 308 (314)
.+.|++|++++.+. +|++. |||+.. ..+|++||+++++++.+++++|+.++..++++
T Consensus 278 ~~~g~tD~~~~~~~~g~p~v~--~Gpg~~-----~~aH~~nE~v~i~~l~~~~~~~~~~l~~l~~~ 336 (336)
T TIGR01902 278 KKTGTSDMNILAPIWTVPMVA--YGPGDS-----TLDHTPQEKISLAEYLIGIKTLMLAIEELWQK 336 (336)
T ss_pred eccccCccceeccccCCCeEE--ECCCCc-----ccCCCCcceeEHHHHHHHHHHHHHHHHHHhcC
Confidence 55688999999875 67654 777653 34899999999999999999999999998764
No 54
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=5e-32 Score=252.12 Aligned_cols=286 Identities=17% Similarity=0.107 Sum_probs=209.7
Q ss_pred CCCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCC-CCccceeeEe
Q 021336 3 EWEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGA-VDKFQGMFGI 76 (314)
Q Consensus 3 ~~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~-~~~~d~~i~~ 76 (314)
.-||+.. ++|++|||| +||+++++|+|+++| +..++++|.|++++||| ++.|+++++++.. ..++|++++.
T Consensus 105 ~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~ 181 (449)
T PRK07907 105 SPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPSLERLLAEHPDLLAADVIVIA 181 (449)
T ss_pred CCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCccHHHHHHhchHhhcCCEEEEe
Confidence 3588865 689999999 579999999999999 34578899999999999 5679999988632 1257888888
Q ss_pred ccCCCCCceEEEeccCccccceeEEEEEEE--cCCCCCCCC-CCCCCHHHHHHHHHHHHHHhhhcc--------CCC---
Q 021336 77 HISPVLPTGTVGSRPGPLLAGSGRFTAVIK--GKGGHAAMP-QDTRDPVLAASFAILTLQHIVSRE--------TDP--- 142 (314)
Q Consensus 77 ~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~--G~~~Hss~p-~~~~nAi~~~~~~i~~l~~~~~~~--------~~~--- 142 (314)
++... ..+.... ...++|..+++|+++ |+++|||.| ..+.||+..+++++.+|.+..... ...
T Consensus 182 E~~~~-~~~~p~i--~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 258 (449)
T PRK07907 182 DSGNW-SVGVPAL--TTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHDEDGNVAVDGLDATEPWLGV 258 (449)
T ss_pred cCCcC-CCCCeEE--EEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCCCCCCEeCCCccCCCCcccc
Confidence 75321 1111111 123458899999988 899999974 668899999999999987532110 000
Q ss_pred -----------------------------CCCeEEEEEEEec---CCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHH
Q 021336 143 -----------------------------LEARVVTVGFIDA---GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEV 190 (314)
Q Consensus 143 -----------------------------~~~~~~~v~~i~g---G~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~ 190 (314)
....+++++.|++ |...|+||++|++++|+|+.|+++.+++.+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~diR~~p~~~~e~v~~~l~~~ 338 (449)
T PRK07907 259 DYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLSLRVAPGQDAAEAQDALVAH 338 (449)
T ss_pred cccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEEEEcCCCCCHHHHHHHHHHH
Confidence 1245788888886 46889999999999999999999999999999999
Q ss_pred HHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCc-HHHHHhh---cCceEEEE
Q 021336 191 IEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAED-FSFYTQR---MPAAHFYV 266 (314)
Q Consensus 191 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD-~~~~~~~---ip~~~~~~ 266 (314)
++... ..+.+++++... ..+....+.++++++.+.+++++.+|.++. ....+++++ .+.+.+. +|++. +
T Consensus 339 l~~~~-~~~~~~~~~~~~--~~~p~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~~~~~~~~~~~~~~~~~v~--~ 411 (449)
T PRK07907 339 LEAHA-PWGAHVTVERGD--AGQPFAADASGPAYDAARAAMREAWGKDPV--DMGMGGSIPFIAELQEAFPQAEILV--T 411 (449)
T ss_pred HHhcC-CCCcEEEEEECC--CcCceeCCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcHHHHHHHHHhcCCCcEEE--e
Confidence 87531 224556665421 112223456889999999999999998763 223444443 2445443 45443 7
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021336 267 GTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 305 (314)
Q Consensus 267 g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 305 (314)
||+++. ..+|++||+++++++.+++++|++++.+|
T Consensus 412 Gpg~~~----~~aH~~nE~i~i~~l~~~~~~~~~~l~~~ 446 (449)
T PRK07907 412 GVEDPK----TRAHSPNESVHLGELERAAVAEALLLARL 446 (449)
T ss_pred ccCCCC----CCCcCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 776531 35999999999999999999999999887
No 55
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=6.3e-31 Score=250.41 Aligned_cols=267 Identities=20% Similarity=0.219 Sum_probs=216.8
Q ss_pred HHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHHHH--------H----cCC----------C-----
Q 021336 21 VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYYMI--------K----EGA----------V----- 67 (314)
Q Consensus 21 ~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~l~--------~----~~~----------~----- 67 (314)
.+++++|.+++.|++.+.+++++|.|++.+|||+. .|++.+. + +|. +
T Consensus 273 ~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~ 352 (591)
T PRK13799 273 EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDAI 352 (591)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhc
Confidence 79999999999999999999999999999999973 3666654 1 121 0
Q ss_pred -------CccceeeEeccCCC-------CCceEEEeccCccccceeEEEEEEEcCCCCCCC-CC-CCCCHHHHHHHHHHH
Q 021336 68 -------DKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-PQ-DTRDPVLAASFAILT 131 (314)
Q Consensus 68 -------~~~d~~i~~~~~~~-------~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~-p~-~~~nAi~~~~~~i~~ 131 (314)
.++++.+.+|.|++ .+.|.+... +|..+++|+++|+++|++. |+ .+.||+..+++++..
T Consensus 353 ~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV~g~-----~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~ 427 (591)
T PRK13799 353 PKIARDPADVLGFIEVHIEQGPVLLELDIPLGIVTSI-----AGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALY 427 (591)
T ss_pred cccccCCCCccEEEEEEeCCCHHHHHCCCcEEEEeee-----ccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHH
Confidence 14668899998886 456666544 4789999999999999995 53 589999999999999
Q ss_pred HHHhhhccCCCCCCeEEEEEEEecC-CCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccc
Q 021336 132 LQHIVSRETDPLEARVVTVGFIDAG-QAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEK 210 (314)
Q Consensus 132 l~~~~~~~~~~~~~~~~~v~~i~gG-~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 210 (314)
++++..+. +....+.+++.|+++ ...|+||++|++++|+|.++.++.+.+.+.|++.++..+...+++++++.
T Consensus 428 l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i~~~i~~ia~~~g~~~ei~~---- 501 (591)
T PRK13799 428 IEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAVADILAEIAAIAARRGIEYKAEL---- 501 (591)
T ss_pred HHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE----
Confidence 98875432 223357888888853 38999999999999999999999999999999999998888888887766
Q ss_pred ccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCc
Q 021336 211 MRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDA 290 (314)
Q Consensus 211 ~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~ 290 (314)
....+++..|+++++.+.+++++. |.+.. ...+++++|+++|.+..|..+.+.|+++. ...|+|+|++++++
T Consensus 502 ~~~~~~~~~d~~lv~~~~~a~~~~-G~~~~--~~~sgag~Da~~~a~~~p~amif~~~g~~-----g~sHsp~E~v~~ed 573 (591)
T PRK13799 502 AMKAAAAPCAPELMKQLEAATDAA-GVPLF--ELASGAGHDAMKIAEIMDQAMLFTRCGNA-----GISHNPLESMTADD 573 (591)
T ss_pred EecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCcchHHHHHHHHhhCCEEEEEEecCCC-----CCCCCccccCCHHH
Confidence 344566788999999999988875 87653 24678899999999998866665554432 23899999999999
Q ss_pred hHHHHHHHHHHHHHHh
Q 021336 291 LPIGAALHAAVAISYL 306 (314)
Q Consensus 291 l~~~~~~~~~~l~~l~ 306 (314)
+..++++|+.++.+|.
T Consensus 574 L~~g~~vl~~~l~~l~ 589 (591)
T PRK13799 574 MELSADAFLDFLNNFA 589 (591)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998875
No 56
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=7.3e-31 Score=250.18 Aligned_cols=266 Identities=20% Similarity=0.213 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC------ccHHH--------HHH---------------cCC-----
Q 021336 21 VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY------GGAYY--------MIK---------------EGA----- 66 (314)
Q Consensus 21 ~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~------~G~~~--------l~~---------------~~~----- 66 (314)
++++++|++++.|++.+..++++|.|++.+|||++ .|++. +++ .|+
T Consensus 273 ~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~ 352 (591)
T PRK13590 273 LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCIDDI 352 (591)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhhc
Confidence 79999999999999999999999999999999963 36664 322 111
Q ss_pred ------CCccceeeEeccCCC-------CCceEEEeccCccccceeEEEEEEEcCCCCCCC-CCC-CCCHHHHHHHHHHH
Q 021336 67 ------VDKFQGMFGIHISPV-------LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAM-PQD-TRDPVLAASFAILT 131 (314)
Q Consensus 67 ------~~~~d~~i~~~~~~~-------~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~-p~~-~~nAi~~~~~~i~~ 131 (314)
-.++++++.+|.|++ .+.+.+... +|..+++|+++|+++|+|. |+. +.||+..+++++..
T Consensus 353 ~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV~~~-----~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~ 427 (591)
T PRK13590 353 PKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIVTSI-----NGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALY 427 (591)
T ss_pred cccccCCCCccEEEEEEeCCCHHHHHCCCceEEEeee-----eccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHH
Confidence 024568889998875 234555444 4889999999999999995 544 68999999999999
Q ss_pred HHHhhhccCCCCCCeEEEEEEEec-CCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccc
Q 021336 132 LQHIVSRETDPLEARVVTVGFIDA-GQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEK 210 (314)
Q Consensus 132 l~~~~~~~~~~~~~~~~~v~~i~g-G~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 210 (314)
+++.... ...++.+++.|.+ |...|+||++|++++|+|+.+.++.+.+.+.|++.+++.+...+++++++.
T Consensus 428 l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~~i~~~i~~ia~~~g~~vei~~---- 499 (591)
T PRK13590 428 VEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVADVLAELEAICERRGLRYTLEE---- 499 (591)
T ss_pred HHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEE----
Confidence 9876432 1234678988874 568999999999999999999999999999999999998888898888876
Q ss_pred ccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCc
Q 021336 211 MRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDA 290 (314)
Q Consensus 211 ~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~ 290 (314)
....+++..|+++++.+.+++++. |.+.. ...+++++|+++|.+.+|..+. |+|+... ...|+++||+++++
T Consensus 500 ~~~~~~~~~d~~lv~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~~p~~mi-fgpg~~~----g~sH~p~E~v~~ed 571 (591)
T PRK13590 500 TMRAAAAPSAPAWQQRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEIMPQAML-FVRGENA----GISHNPLESSTADD 571 (591)
T ss_pred eecCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHHCCEEEE-EEeeCCC----CCCCCCccCCCHHH
Confidence 345566788999999999999886 87653 3467899999999998886553 4444211 24899999999999
Q ss_pred hHHHHHHHHHHHHHHhc
Q 021336 291 LPIGAALHAAVAISYLD 307 (314)
Q Consensus 291 l~~~~~~~~~~l~~l~~ 307 (314)
+.+++++|+.++..++.
T Consensus 572 L~~g~~vl~~ll~~l~~ 588 (591)
T PRK13590 572 MQLAVQAFQHLLDQLAA 588 (591)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988864
No 57
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-31 Score=232.65 Aligned_cols=290 Identities=16% Similarity=0.128 Sum_probs=220.4
Q ss_pred CCcccC--CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC--ccHHHHHHcCCCCccceeeEe
Q 021336 4 WEHKSK--NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY--GGAYYMIKEGAVDKFQGMFGI 76 (314)
Q Consensus 4 ~p~~~~--~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~--~G~~~l~~~~~~~~~d~~i~~ 76 (314)
-||+.. .+|.+|||| +|+..++.|.|++.|+..|+++.++|.+.|++|||.+ .|++.+.+...|++....+++
T Consensus 110 ~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l~~~fil 189 (420)
T KOG2275|consen 110 PPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKLNLGFIL 189 (420)
T ss_pred CCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhcccceeEEe
Confidence 488864 579999999 5689999999999999999999999999999999943 689988884456666777777
Q ss_pred ccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhh---------hccCCCCCCeE
Q 021336 77 HISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIV---------SRETDPLEARV 147 (314)
Q Consensus 77 ~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~---------~~~~~~~~~~~ 147 (314)
+.....+... ...+++++|.+|++|++.|++||+|.|.. ..|+..+.++|..+.+.. .+.....+.++
T Consensus 190 DEG~~se~d~--~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~~~~vtT 266 (420)
T KOG2275|consen 190 DEGGATENDF--ATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLALGDVTT 266 (420)
T ss_pred cCCCCCcccc--eeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCceeccceeE
Confidence 7432222222 33456667999999999999999997544 257777777777775543 11233467899
Q ss_pred EEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHH-HHHHHHHHHHhCCeEEEEEecc-cccCCCCccCCHHHHH
Q 021336 148 VTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRI-KEVIEMQAAVHQCSATIDFLEE-KMRHYPATVNDEKMYE 225 (314)
Q Consensus 148 ~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i-~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~l~~ 225 (314)
+|++.|+||.+.|++|...++.+|+|+.+..+.+++.+++ +++.++. ..+..+++..... ...+..+.+.+.|++.
T Consensus 267 ~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~~--~eg~t~~f~~~~~~~~~~~t~~~~s~p~w~ 344 (420)
T KOG2275|consen 267 INVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEEA--GEGVTLEFSQKVILDYPPVTPTDDSNPFWT 344 (420)
T ss_pred EeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhhc--CCceEEeccCcccCCCCCCCCCCCCChHHH
Confidence 9999999999999999999999999999999999999988 5554432 1233444433100 1222333455678999
Q ss_pred HHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 021336 226 HGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAIS 304 (314)
Q Consensus 226 ~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~ 304 (314)
.+..++++. +.+.. +...+|+||.+++++. +| ++.|.+..+. .-..|.-||++..+.+.+++++|+.++..
T Consensus 345 ~~~~a~~~~-~~k~~--~~i~~gstdsr~~rn~gvp-~~~fsp~~nt----~~~~H~hnE~l~~~~~l~gi~~~~~~i~~ 416 (420)
T KOG2275|consen 345 AFAGALKDE-GGKGY--PEIGPGSTDSRHIRNEGVP-AIGFSPIINT----PMLLHDHNEFLNEKVFLRGIEIYYTIIVN 416 (420)
T ss_pred HHHHHHHHh-cCccc--eeecccccccchhhhcCcc-hhcccccccc----cceecchhhhhCchhhhhhhhHHHHHHHh
Confidence 999999999 55542 4688999999999999 88 4555665553 46799999999999999999999997765
Q ss_pred Hh
Q 021336 305 YL 306 (314)
Q Consensus 305 l~ 306 (314)
+.
T Consensus 417 ~~ 418 (420)
T KOG2275|consen 417 LA 418 (420)
T ss_pred hc
Confidence 53
No 58
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=8.3e-31 Score=243.60 Aligned_cols=277 Identities=13% Similarity=0.004 Sum_probs=192.2
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCC----ccce--
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVD----KFQG-- 72 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~----~~d~-- 72 (314)
-||+.. +||++|||| +||+++++|.|+++|++.+..++++|.|+|++||| ++.|++.+++..... .+|.
T Consensus 98 ~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~~~~~~~~~ 177 (444)
T PRK07205 98 PPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATMGFAPDSSF 177 (444)
T ss_pred CCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCeeECCCCCC
Confidence 389864 789999999 57999999999999999998899999999999999 456888887642110 1121
Q ss_pred ------------eeEeccCCCCCceEEEe--------------ccCc---------cccce----eEEEEEEEcCCCCCC
Q 021336 73 ------------MFGIHISPVLPTGTVGS--------------RPGP---------LLAGS----GRFTAVIKGKGGHAA 113 (314)
Q Consensus 73 ------------~i~~~~~~~~~~g~v~~--------------~~g~---------~~~g~----~~~~i~~~G~~~Hss 113 (314)
.+... + ...... ..|. .+.|. .+.+|+++|+++|||
T Consensus 178 ~v~~~ekG~~~~~i~~~--~---~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~~Hss 252 (444)
T PRK07205 178 PLTYAEKGLLQAKLVGP--G---SDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKSVHAK 252 (444)
T ss_pred ceEEEEeceEEEEEEeC--C---ccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEEcccC
Confidence 11111 1 000000 0000 01121 234899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhh-----hc---------------cCCCCCCeEEEEEEEecCCCCccccCcEEEEEEEe
Q 021336 114 MPQDTRDPVLAASFAILTLQHIV-----SR---------------ETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFR 173 (314)
Q Consensus 114 ~p~~~~nAi~~~~~~i~~l~~~~-----~~---------------~~~~~~~~~~~v~~i~gG~~~nvip~~~~~~~~~R 173 (314)
.|+.|.||+..+++++..+++.. .. ........++|++. .|+||++|++++|+|
T Consensus 253 ~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvvP~~a~~~ld~R 326 (444)
T PRK07205 253 DAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTITKEKSEIRIDIR 326 (444)
T ss_pred CCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEECCEEEEEEEEe
Confidence 99999999999999998875420 00 00112345677765 479999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHH
Q 021336 174 SLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFS 253 (314)
Q Consensus 174 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~ 253 (314)
++|+.+.+++.+.|+++++. .+.+++... ..+....+.++++++++.+++++.+|.+.. ...+++++|+.
T Consensus 327 ~~p~~~~e~v~~~i~~~~~~----~~v~~~~~~----~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~--~~~~gg~~~~~ 396 (444)
T PRK07205 327 IPVLADKEKLVQQLSQKAQE----YGLTYEEFD----YLAPLYVPLDSELVSTLMSVYQEKTGDDSP--AQSSGGATFAR 396 (444)
T ss_pred CCCCCCHHHHHHHHHHHHHH----cCcEEEEec----CCCceeeCCCcHHHHHHHHHHHHHhCCCCc--eEEeccHHHHH
Confidence 99999999999999998753 344433211 112223467889999999999998887542 22344555543
Q ss_pred HHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhcc
Q 021336 254 FYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLDN 308 (314)
Q Consensus 254 ~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~~ 308 (314)
.+ .|++ .+|+..+ |....+|++||+++++++.+++++|+.++.+|+++
T Consensus 397 ~~---~~~i--~~G~~~P--g~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~~ 444 (444)
T PRK07205 397 TM---PNCV--AFGALFP--GAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTTD 444 (444)
T ss_pred hC---CCcE--EECCccC--CCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhcC
Confidence 32 3543 3674432 22346999999999999999999999999998763
No 59
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.97 E-value=3e-30 Score=238.86 Aligned_cols=276 Identities=15% Similarity=0.115 Sum_probs=191.1
Q ss_pred CCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCCCC----ccce--
Q 021336 4 WEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVD----KFQG-- 72 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~----~~d~-- 72 (314)
-||+.. .+|++||+| +||++++++.|++.|++.+.+++++|+|+|++|||. +.|++++++..... ..|+
T Consensus 88 ~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~~~~d~~~ 167 (447)
T TIGR01887 88 PPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAPDIGFTPDAEF 167 (447)
T ss_pred CCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCCCEEEeCCCCc
Confidence 588865 678999999 679999999999999999988899999999999994 56888888763211 1122
Q ss_pred -eeEeccC----------------------CCCCceEE-------Eecc-------------------CccccceeEEEE
Q 021336 73 -MFGIHIS----------------------PVLPTGTV-------GSRP-------------------GPLLAGSGRFTA 103 (314)
Q Consensus 73 -~i~~~~~----------------------~~~~~g~v-------~~~~-------------------g~~~~g~~~~~i 103 (314)
++..++. .+.|.+.+ .... |...++..+++|
T Consensus 168 ~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i 247 (447)
T TIGR01887 168 PIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSFEVNDGTATI 247 (447)
T ss_pred ceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEEEecCCEEEE
Confidence 2221110 01121111 0111 111222237999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHHH--Hhhh-------c---------------cCCCCCCeEEEEEEEecCCCC
Q 021336 104 VIKGKGGHAAMPQDTRDPVLAASFAILTLQ--HIVS-------R---------------ETDPLEARVVTVGFIDAGQAG 159 (314)
Q Consensus 104 ~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~--~~~~-------~---------------~~~~~~~~~~~v~~i~gG~~~ 159 (314)
+++|+++|||.|+.|.||+..|++++..++ +... . .......+++|++.|++|
T Consensus 248 ~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~nvg~I~~g--- 324 (447)
T TIGR01887 248 TLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMNVGVIDYE--- 324 (447)
T ss_pred EEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEEEEEEEEe---
Confidence 999999999999999999999999999886 2110 0 001124578999999987
Q ss_pred ccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCC
Q 021336 160 NIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPN 239 (314)
Q Consensus 160 nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~ 239 (314)
+|++|++++|+|++|+++.+++.+.+.+.+. +. ..+.... ...++. .+.++++++.+.+++++.+|.++
T Consensus 325 --~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~~-~~~p~~-~~~~~~lv~~l~~~~~~~~g~~~ 393 (447)
T TIGR01887 325 --NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTENG-YLKPLY-VPKDDPLVQTLMKVYEKQTGDEG 393 (447)
T ss_pred --CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEcc-CCCCeE-ECCCCHHHHHHHHHHHHHhCCCC
Confidence 3899999999999999999977776664321 21 2222210 012222 35678999999999999988765
Q ss_pred cccCCCCCCCCcHHHHHhhcCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 021336 240 VHLTPVEMGAEDFSFYTQRMPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVA 302 (314)
Q Consensus 240 ~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l 302 (314)
. +....++||++++. .+ ..+||..+ |...++|++||++++++|..++++|..++
T Consensus 394 ~--~~~~~ggtda~~~~----~~-i~~Gp~~p--G~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 394 T--PVAIGGGTYARLME----NG-VAFGALFP--GEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred C--eeEecchhhhhhCC----Cc-EEeCCCCC--CCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 3 23567778877643 22 34676543 23456999999999999999999998763
No 60
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.97 E-value=1.4e-29 Score=237.11 Aligned_cols=274 Identities=14% Similarity=0.099 Sum_probs=196.8
Q ss_pred CCcccC-CCCccccChh----H--HHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCCCCccceeeE
Q 021336 4 WEHKSK-NNGKMHGCGH----D--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFG 75 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G~----d--~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~~~d~~i~ 75 (314)
-||+.. .+|++||+|. | ++++++|.+++. .+ .++++|.++|++|||. +.|++.+..+.. +.++++.
T Consensus 88 ~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~~~~~~ 161 (477)
T TIGR01893 88 DPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SGKILIN 161 (477)
T ss_pred CCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CCcEEEE
Confidence 367754 6899999994 5 677777777653 33 3567999999999994 469999876532 3456665
Q ss_pred eccCCC------CCceE-----EEeccCccccceeEEEEEEEc-CCCCCC-CCCCC-CCHHHHHHHHHHHHHHhhhccCC
Q 021336 76 IHISPV------LPTGT-----VGSRPGPLLAGSGRFTAVIKG-KGGHAA-MPQDT-RDPVLAASFAILTLQHIVSRETD 141 (314)
Q Consensus 76 ~~~~~~------~~~g~-----v~~~~g~~~~g~~~~~i~~~G-~~~Hss-~p~~~-~nAi~~~~~~i~~l~~~~~~~~~ 141 (314)
.+.... .+.+. +.......++|..+++|+++| +++||+ .|+.+ .||+..++++|.++++..
T Consensus 162 ~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~----- 236 (477)
T TIGR01893 162 IDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL----- 236 (477)
T ss_pred ecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC-----
Confidence 542110 00000 000111124688999999999 999998 58877 599999999999887642
Q ss_pred CCCCeEEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHH-------------------------
Q 021336 142 PLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAA------------------------- 196 (314)
Q Consensus 142 ~~~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~------------------------- 196 (314)
..+++.+.||...|+||++|++++++|..+....+.+.+.+.+.++....
T Consensus 237 -----~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 311 (477)
T TIGR01893 237 -----NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNITIEVSKRENSVKVFSENTT 311 (477)
T ss_pred -----CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEECCCcccccCHHHH
Confidence 26788889999999999999999999988777777777766666554331
Q ss_pred -------------------------------------------------------------------HhCCeEEEEEecc
Q 021336 197 -------------------------------------------------------------------VHQCSATIDFLEE 209 (314)
Q Consensus 197 -------------------------------------------------------------------~~~~~~~~~~~~~ 209 (314)
..++++++..
T Consensus 312 ~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~~~~~v~~~~--- 388 (477)
T TIGR01893 312 DKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEKIESIAKLAGARVEVSA--- 388 (477)
T ss_pred HHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHHHHHHhhhcCeEEEEec---
Confidence 1122222211
Q ss_pred cccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCce-EEEEecCCCCCCCCCCCCCCCCCCCC
Q 021336 210 KMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAA-HFYVGTRNETLKPFIRLHSPYLVVDE 288 (314)
Q Consensus 210 ~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~g~~~~~~~~~~~~H~~~E~i~~ 288 (314)
..+...++.|+++++.+.+++++.+|.++. ...++|++|+++|.+.+|.+ ...+||... .+|+|||++++
T Consensus 389 -~~~p~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~~------~~H~~nE~i~i 459 (477)
T TIGR01893 389 -GYPSWQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGPNIY------DPHSPNERVSI 459 (477)
T ss_pred -CCCcccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCCCCC------CCCCCCceeeH
Confidence 222333567889999999999999998763 34788899999999865543 345787654 39999999999
Q ss_pred CchHHHHHHHHHHHHHH
Q 021336 289 DALPIGAALHAAVAISY 305 (314)
Q Consensus 289 ~~l~~~~~~~~~~l~~l 305 (314)
+++.+++++|++++..|
T Consensus 460 ~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 460 SSVEKVWDFLVKVLERL 476 (477)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999988543
No 61
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.97 E-value=3.5e-29 Score=232.97 Aligned_cols=271 Identities=13% Similarity=0.090 Sum_probs=194.2
Q ss_pred CCcccC-CCCccccChh----H--HHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeE
Q 021336 4 WEHKSK-NNGKMHGCGH----D--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFG 75 (314)
Q Consensus 4 ~p~~~~-~~g~~~~~G~----d--~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~ 75 (314)
-||... .+|++||+|. | +++|++|.++ ++.+. ..++|.++|++||| ++.|++.+.. +. .+++++|+
T Consensus 94 ~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~~~~i~ 167 (485)
T PRK15026 94 DPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQADILIN 167 (485)
T ss_pred CCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CCcCEEEE
Confidence 478754 6789988883 4 6777766654 44554 37899999999999 4579998865 33 36899999
Q ss_pred eccCCCCCceEEE-eccC-------------ccccceeEEEEEEEc-CCCCCC-CCCCCC-CHHHHHHHHHHHHHHhhhc
Q 021336 76 IHISPVLPTGTVG-SRPG-------------PLLAGSGRFTAVIKG-KGGHAA-MPQDTR-DPVLAASFAILTLQHIVSR 138 (314)
Q Consensus 76 ~~~~~~~~~g~v~-~~~g-------------~~~~g~~~~~i~~~G-~~~Hss-~p~~~~-nAi~~~~~~i~~l~~~~~~ 138 (314)
++++. .|.+. ...| ...+|..+++|+++| ++|||+ .|+.|. ||+..|+++|.++.+
T Consensus 168 ~e~~~---~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~~---- 240 (485)
T PRK15026 168 TDSEE---EGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAE---- 240 (485)
T ss_pred eCCCC---CCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhHh----
Confidence 98652 23221 1111 011477899999999 999999 799998 999999999987432
Q ss_pred cCCCCCCeEEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHH-------------------------
Q 021336 139 ETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEM------------------------- 193 (314)
Q Consensus 139 ~~~~~~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~------------------------- 193 (314)
.++++++.|+||++.|+||++|++.+++|.......+.+.+.+.+.++.
T Consensus 241 ------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (485)
T PRK15026 241 ------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIA 314 (485)
T ss_pred ------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEEccccccccCH
Confidence 2678999999999999999998888888877666666655555444421
Q ss_pred -------------------------------------------------------------------HHHHhCCeEEEEE
Q 021336 194 -------------------------------------------------------------------QAAVHQCSATIDF 206 (314)
Q Consensus 194 -------------------------------------------------------------------~~~~~~~~~~~~~ 206 (314)
.+...|.++++..
T Consensus 315 ~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~g~~~~~~~ 394 (485)
T PRK15026 315 KSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKG 394 (485)
T ss_pred HHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHHHHHHHHHHHHcCcEEEEeC
Confidence 1112233322222
Q ss_pred ecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhhcCce-EEEEecCCCCCCCCCCCCCCCCC
Q 021336 207 LEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQRMPAA-HFYVGTRNETLKPFIRLHSPYLV 285 (314)
Q Consensus 207 ~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~-~~~~g~~~~~~~~~~~~H~~~E~ 285 (314)
..+.+..+.|+++++.+.++|++++|.++. +..+.+++|++.|.+..|.+ +..|||...+ +|+|||+
T Consensus 395 ----~~p~w~~~~ds~lv~~l~~~y~e~~G~~~~--~~~ihaglEcG~~~~~~p~i~~VsfGP~~~~------~HspdE~ 462 (485)
T PRK15026 395 ----AYPGWQPDANSPVMHLVRETYQRLFNKTPN--IQIIHAGLECGLFKKPYPEMDMVSIGPTITG------PHSPDEQ 462 (485)
T ss_pred ----CCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEEEehHHHHHhhCCCCCEEEECCCCCC------CCCCCcE
Confidence 233334567889999999999999998763 34788999999999764432 2348888754 9999999
Q ss_pred CCCCchHHHHHHHHHHHHHH
Q 021336 286 VDEDALPIGAALHAAVAISY 305 (314)
Q Consensus 286 i~~~~l~~~~~~~~~~l~~l 305 (314)
++++++.+..+++..++.++
T Consensus 463 v~I~s~~~~~~~l~~~l~~~ 482 (485)
T PRK15026 463 VHIESVGHYWTLLTELLKEI 482 (485)
T ss_pred EEhHHHHHHHHHHHHHHHhh
Confidence 99999976666666666555
No 62
>PRK08554 peptidase; Reviewed
Probab=99.97 E-value=5.2e-29 Score=230.19 Aligned_cols=285 Identities=21% Similarity=0.177 Sum_probs=196.8
Q ss_pred CCCcccC-CCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcC--CCCccceeeE
Q 021336 3 EWEHKSK-NNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEG--AVDKFQGMFG 75 (314)
Q Consensus 3 ~~p~~~~-~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~--~~~~~d~~i~ 75 (314)
..||+.. .+|++|||| |||+++++|+|+++|++.+ ++++|.|+|++|||. +.++..+++.. ...++|++|+
T Consensus 84 ~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~--~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~~iv 161 (438)
T PRK08554 84 TEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEP--LNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPKYMIN 161 (438)
T ss_pred cCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEcccccCccccHHHHHHHHhcCCCCCEEEE
Confidence 4588864 678999999 7899999999999998754 678999999999995 43445554431 1135789998
Q ss_pred eccCCCCCceEEEeccCcc-----------ccce---eEEEEEEEcCC-CCCCCCCCCCC--HHHHHHHHHHHHHHhhhc
Q 021336 76 IHISPVLPTGTVGSRPGPL-----------LAGS---GRFTAVIKGKG-GHAAMPQDTRD--PVLAASFAILTLQHIVSR 138 (314)
Q Consensus 76 ~~~~~~~~~g~v~~~~g~~-----------~~g~---~~~~i~~~G~~-~Hss~p~~~~n--Ai~~~~~~i~~l~~~~~~ 138 (314)
.++....+. +..+.|.. -.|. .++.+++.|.+ +|++.+..+.| |+..+++++.++..+...
T Consensus 162 ~Ept~~~~~--~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 239 (438)
T PRK08554 162 ADGIGMKPI--IRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNVLAVS 239 (438)
T ss_pred eCCCCCcch--hhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCceEEE
Confidence 876432211 11111110 0122 35667777775 99997765555 577777777665432100
Q ss_pred cC------C-CCCCeEEEEEEEecCC-----------------------------------CCccc---cCcEEEEEEEe
Q 021336 139 ET------D-PLEARVVTVGFIDAGQ-----------------------------------AGNII---PEIVRFGGTFR 173 (314)
Q Consensus 139 ~~------~-~~~~~~~~v~~i~gG~-----------------------------------~~nvi---p~~~~~~~~~R 173 (314)
.. + .....++++....+|. ..|++ |++|++++|+|
T Consensus 240 ~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~DiR 319 (438)
T PRK08554 240 LEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKLDIR 319 (438)
T ss_pred EeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEEEEE
Confidence 00 0 0112233333333333 45565 89999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHH
Q 021336 174 SLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFS 253 (314)
Q Consensus 174 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~ 253 (314)
+.+ .+.+++.++|+++++.. ..+++++++... ..+.+.++.++++++.+++++++. |.++. +...+|+||++
T Consensus 320 ~~~-~~~e~v~~~i~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~lv~~~~~~~~~~-g~~~~--~~~~~GgtDa~ 391 (438)
T PRK08554 320 AMS-YSKEDIERTLKEVLEFN--LPEAEVEIRTNE--KAGYLFTPPDEEIVKVALRVLKEL-GEDAE--PVEGPGASDSR 391 (438)
T ss_pred ecC-CCHHHHHHHHHHHhhcc--CCCceEEEEecc--CCCCcCCCCChHHHHHHHHHHHHh-CCCcE--EEecCCchHHH
Confidence 988 57899999999887542 235556665421 234445667899999999999985 97653 34778999999
Q ss_pred HHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 254 FYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 254 ~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
+++.. +|++. +||+.. .+|++|||+++++|.+++++|..++.+|+.
T Consensus 392 ~~~~~Gip~v~--~Gp~~~------~~H~~~E~v~i~~l~~~~~i~~~~i~~l~~ 438 (438)
T PRK08554 392 YFTPYGVKAID--FGPKGG------NIHGPNEYVEIDSLKKMPEVYKRIALRLLG 438 (438)
T ss_pred HHHhcCCCceE--ECCCCC------CCCCCcceEEHHHHHHHHHHHHHHHHHHhC
Confidence 99888 99876 677543 399999999999999999999999998863
No 63
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.83 E-value=1.5e-19 Score=162.47 Aligned_cols=261 Identities=17% Similarity=0.134 Sum_probs=205.2
Q ss_pred hHHHHHHHHHHHHHHHhcc-cCCCceEEEEeecCCCC-CccHHHHHHcCCCCccceeeEeccCCCCCceEEEeccCcccc
Q 021336 19 HDVHTTILLGAARLLKHRM-DRLKGTVKLVFQPGEEG-YGGAYYMIKEGAVDKFQGMFGIHISPVLPTGTVGSRPGPLLA 96 (314)
Q Consensus 19 ~d~~~a~~l~A~~~l~~~~-~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~~~~~d~~i~~~~~~~~~~g~v~~~~g~~~~ 96 (314)
++++++.++.|+..+++.. ..+.++|.+.|++|||. +.|+..+.-.. | .+++.+.++ +.+.|.+.... .
T Consensus 145 ~kAGia~i~~al~~~~~~~~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~-f-~a~~ay~iD---Gg~~g~i~~ea----~ 215 (414)
T COG2195 145 DKAGIAEIMTALSVLREKHPEIPHGGIRGGFSPDEEIGGRGAANKDVAR-F-LADFAYTLD---GGPVGEIPREA----F 215 (414)
T ss_pred chhHHHHHHHHHHHHhhcCccccccCeEEEecchHHhhhhhhhhccHHh-h-hcceeEecC---CCccCeeeeec----c
Confidence 4589999999999999663 45789999999999994 47877655332 2 466777765 34567664432 1
Q ss_pred ceeEEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEecCCCCccccCcEEEEEEEecC
Q 021336 97 GSGRFTAVIKGKGGHAA-MPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFIDAGQAGNIIPEIVRFGGTFRSL 175 (314)
Q Consensus 97 g~~~~~i~~~G~~~Hss-~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~ 175 (314)
+...+++++.|+..|++ .+....||+..+.+.+..+.... ....++.+.+...++...|.|.+++...+.+|..
T Consensus 216 ~~~~~~~~~~g~~~h~~~a~~~~i~a~~~a~e~~~~~~~~~-----~~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~ 290 (414)
T COG2195 216 NAAAVRATIVGPNVHPGSAKGKMINALLLAAEFILELPLEE-----VPELTEGPEGVYHLGDSTNSVEETSLNLAIIRDF 290 (414)
T ss_pred chheeeeeeeccCcCccchHHHHhhHHHhhhhhhhcCCccc-----ccccccccceEEeccccccchhhhhhhhhhhhhc
Confidence 55789999999999998 57778899998888776554321 1135677788888899999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHH
Q 021336 176 TTEGLLYLEQRIKEVIEMQAAVHQ--CSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFS 253 (314)
Q Consensus 176 ~~~~~~~~~~~i~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~ 253 (314)
.....++.+..+++.+++....++ ..++++..+ ..+.+....+++++...+++++++ +.++. ...+.||+|++
T Consensus 291 d~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p~--v~~i~gGtd~~ 365 (414)
T COG2195 291 DNLLFRARKDSMKDVVEEMAASLGKLAGAELEVKD--SYPGWKIKPDSPLVDLAKKAYKEL-GIKPK--VKPIHGGTDGG 365 (414)
T ss_pred chhHHHHhHHHHHHHHHHHHHHhhhccceEEEEec--cccCcCCCCCchHHHHHHHHHHHh-CCCce--EEEeecccchh
Confidence 999999999999999998888877 555655522 223444567889999999999999 66653 45899999999
Q ss_pred HHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 021336 254 FYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISY 305 (314)
Q Consensus 254 ~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l 305 (314)
.+..+ +|+..++.|| ..+ .|+++||++++++.+++.++..++..+
T Consensus 366 ~is~~g~p~~~i~~Gp-~~n------~Hs~~E~v~I~s~ek~~~~l~~l~~~~ 411 (414)
T COG2195 366 VLSFKGLPTPNISTGP-GEN------PHSPDEFVSIESMEKAVQVLVELLKLA 411 (414)
T ss_pred hhhccCCCCceEeccc-ccC------CCCccceeehHHHHHHHHHHHHHHHHh
Confidence 99998 8888888997 544 999999999999999999998877654
No 64
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.83 E-value=1e-18 Score=151.63 Aligned_cols=288 Identities=17% Similarity=0.108 Sum_probs=202.1
Q ss_pred CCccc-CCCCccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHc---CCCCccceeeE
Q 021336 4 WEHKS-KNNGKMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKE---GAVDKFQGMFG 75 (314)
Q Consensus 4 ~p~~~-~~~g~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~---~~~~~~d~~i~ 75 (314)
-||.- .++|.++||| .+|.+++.+.|++++++.|..++-+|.|+|.+-|| ++.|...++++ ++|+++|++.+
T Consensus 114 dPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vci 193 (473)
T KOG2276|consen 114 DPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFEGMEESGSEGLDELIEKEKDKFFKDVDFVCI 193 (473)
T ss_pred CCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEEEechhccCccHHHHHHHHhhhhhccCCEEEe
Confidence 48884 5789999999 24999999999999999999999999999999999 55677776653 45778999988
Q ss_pred ecc---CCCCCceEEEeccCccccceeEEEEEEEc--CCCCCCC-CCCCCCHHHHHHHHHHHHHHhhhc-----------
Q 021336 76 IHI---SPVLPTGTVGSRPGPLLAGSGRFTAVIKG--KGGHAAM-PQDTRDPVLAASFAILTLQHIVSR----------- 138 (314)
Q Consensus 76 ~~~---~~~~~~g~v~~~~g~~~~g~~~~~i~~~G--~~~Hss~-p~~~~nAi~~~~~~i~~l~~~~~~----------- 138 (314)
.+. +...|+ ...|. .|...+.|+++| +-.||+. -..-..|+..|+.++..|.....+
T Consensus 194 SdnyWlg~kkPc----ltyGl--RG~~yf~i~v~g~~~DlHSGvfGG~~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~va 267 (473)
T KOG2276|consen 194 SDNYWLGTKKPC----LTYGL--RGVIYFQIEVEGPSKDLHSGVFGGVVHEAMNDLVLVMSSLVDIQGRILIPGIYEDVA 267 (473)
T ss_pred eCceeccCCCcc----ccccc--ccceeEEEEEeecccccccccccchhHHHHHHHHHHHHHhcCcCCcEeccchhhhcc
Confidence 552 111222 22232 378899999999 7789994 333445666666666665321000
Q ss_pred -----c------CC---------------CC-----------CCeEEEEEEEec----CCCCccccCcEEEEEEEecCCH
Q 021336 139 -----E------TD---------------PL-----------EARVVTVGFIDA----GQAGNIIPEIVRFGGTFRSLTT 177 (314)
Q Consensus 139 -----~------~~---------------~~-----------~~~~~~v~~i~g----G~~~nvip~~~~~~~~~R~~~~ 177 (314)
+ .+ +. ...+.++..|.| .-+..+||.++.-.|.+|+.|.
T Consensus 268 plteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihgIeGaFs~pG~kTVIP~kVigkfSiRlVP~ 347 (473)
T KOG2276|consen 268 PLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHGIEGAFSGPGAKTVIPAKVVGKFSIRLVPN 347 (473)
T ss_pred CCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceecccceeeCCCceEEeehhheeeeEEEecCC
Confidence 0 00 00 123455655555 3467789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC--eEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCc-HHH
Q 021336 178 EGLLYLEQRIKEVIEMQAAVHQC--SATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAED-FSF 254 (314)
Q Consensus 178 ~~~~~~~~~i~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD-~~~ 254 (314)
.+.+.+.+.+.+.++..-...+. +++++..- ...++....+++-+.+++++++++||.+|- ....+|+-- ...
T Consensus 348 md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~--~~~~Wv~d~~~~~y~a~krA~~~v~gvePd--~~ReGgSIPvt~t 423 (473)
T KOG2276|consen 348 MDPEQVERLVTRYLEKVFAELNSPNKLKVSMGH--AGAPWVSDPDDPHYLALKRAIETVYGVEPD--FTREGGSIPVTLT 423 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCceEEeecC--CCCceecCCCchhHHHHHHHHHHhhCCCCC--ccccCCccceehH
Confidence 99999999999998876555443 45555521 222333466788899999999999998862 223333322 345
Q ss_pred HHhh--cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHhc
Q 021336 255 YTQR--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAISYLD 307 (314)
Q Consensus 255 ~~~~--ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~~l~~ 307 (314)
|++. .|.+..-+|..+ .++|+.||++.+..+..++++|+..+.++.+
T Consensus 424 fQ~~~~~~V~llP~G~~d------D~aHsqNEkl~i~N~~~G~k~l~ay~~el~~ 472 (473)
T KOG2276|consen 424 FQDITGKSVLLLPYGASD------DGAHSQNEKLNITNYVEGTKVLAAYISELAQ 472 (473)
T ss_pred HHHHhCCCeEEecccccc------cchhhhcccccHHHHhhhHHHHHHHHHHHhc
Confidence 6665 354443344333 4599999999999999999999999988753
No 65
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.75 E-value=1.8e-17 Score=124.54 Aligned_cols=103 Identities=23% Similarity=0.275 Sum_probs=92.4
Q ss_pred ccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc-----CCCCCCeEEEEEEEecCCCCccccCcEEEE
Q 021336 95 LAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRE-----TDPLEARVVTVGFIDAGQAGNIIPEIVRFG 169 (314)
Q Consensus 95 ~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~-----~~~~~~~~~~v~~i~gG~~~nvip~~~~~~ 169 (314)
++|..+++|+++|+++|+|.|+.+.||+..+++++.+|++...+. .......+++++.++||...|+||++|+++
T Consensus 3 ~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~~ 82 (111)
T PF07687_consen 3 HRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATLT 82 (111)
T ss_dssp EEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEEE
T ss_pred CCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEEE
Confidence 358899999999999999999999999999999999998874332 134567899999999999999999999999
Q ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHH
Q 021336 170 GTFRSLTTEGLLYLEQRIKEVIEMQAAV 197 (314)
Q Consensus 170 ~~~R~~~~~~~~~~~~~i~~~i~~~~~~ 197 (314)
+++|++|..+.+++++.|++.++..+..
T Consensus 83 ~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 83 VDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 9999999999999999999999887643
No 66
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.71 E-value=3.2e-17 Score=135.00 Aligned_cols=160 Identities=24% Similarity=0.271 Sum_probs=121.5
Q ss_pred CCCccc-CCCCccccChh---HHHHHHHHHHHHHHHhcccCCCceEEEEeecCCCCC-c-cHHHHHHcCC--CCccceee
Q 021336 3 EWEHKS-KNNGKMHGCGH---DVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEEGY-G-GAYYMIKEGA--VDKFQGMF 74 (314)
Q Consensus 3 ~~p~~~-~~~g~~~~~G~---d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~~-~-G~~~l~~~~~--~~~~d~~i 74 (314)
..||.. ..+|++||||+ +++++++++|++.|++.+..++++|.|+|++|||.+ . |++.+++++. ..++|+++
T Consensus 17 ~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~l~~~~~~~~~~~~~~~ 96 (189)
T PF01546_consen 17 HDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKHLLEEGAFFGLHPDYVI 96 (189)
T ss_dssp SSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHHHHHHCEEEEEEESEEE
T ss_pred CCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhhhhhhcccccccccccc
Confidence 357774 57899999994 489999999999999998899999999999999954 4 9999998742 11355555
Q ss_pred EeccCCCCCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCeEEEEEEEe
Q 021336 75 GIHISPVLPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHIVSRETDPLEARVVTVGFID 154 (314)
Q Consensus 75 ~~~~~~~~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~v~~i~ 154 (314)
..++... +...
T Consensus 97 ~~e~~~~---------------~~~~------------------------------------------------------ 107 (189)
T PF01546_consen 97 IGEPTGK---------------GGVG------------------------------------------------------ 107 (189)
T ss_dssp ECECETT---------------SEEE------------------------------------------------------
T ss_pred ccccccc---------------cccc------------------------------------------------------
Confidence 5432110 1000
Q ss_pred cCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhh
Q 021336 155 AGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASM 234 (314)
Q Consensus 155 gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~ 234 (314)
...++++++.+.+++++.
T Consensus 108 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~ 125 (189)
T PF01546_consen 108 --------------------------------------------------------------SDNDPPLVQALQAAAQEV 125 (189)
T ss_dssp --------------------------------------------------------------HCTCHHHHHHHHHHHHHT
T ss_pred --------------------------------------------------------------ccccHHHHHHHHHHHHHH
Confidence 346788999999999999
Q ss_pred cCCCCcccCCCCCCCCcHHHHHh--h--cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 021336 235 VGEPNVHLTPVEMGAEDFSFYTQ--R--MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAALHAAVAI 303 (314)
Q Consensus 235 ~g~~~~~~~~~~~g~tD~~~~~~--~--ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~~~~~~l~ 303 (314)
++.+. .+..+++++|++++.+ . +|+ .++||+.. .+|++||++.++++.+++++|+.++.
T Consensus 126 ~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~--i~~G~~~~------~~H~~~E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 126 GGEPP--EPVASGGGTDAGFLAEVKGLGIPA--IGFGPGGS------NAHTPDEYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp TSSEE--EEEEESSSSTHHHHHCHHHTTEEE--EEEESCEE------STTSTT-EEEHHHHHHHHHHHHHHHH
T ss_pred hhccc--cccceeccccchhhhhhhccccce--eeeCCCCC------CCCCCCcEecHHHHHHHHHHHHHHHh
Confidence 55232 2358889999999995 3 554 45777653 49999999999999999999999875
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=98.78 E-value=6.7e-08 Score=85.84 Aligned_cols=171 Identities=16% Similarity=0.131 Sum_probs=102.9
Q ss_pred ccccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHc--CCC--Cccc--eeeEeccCCC-
Q 021336 13 KMHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKE--GAV--DKFQ--GMFGIHISPV- 81 (314)
Q Consensus 13 ~~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~--~~~--~~~d--~~i~~~~~~~- 81 (314)
-+.||| |++++|+.|+.++.+.+.+ .++|+|.|+.++||| .+.|++..+.. +.- .+.+ ++|.+++...
T Consensus 132 wlfGRGa~DMKsGlav~la~L~~fa~~~-~~~GNlLf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~ 210 (553)
T COG4187 132 WLFGRGALDMKSGLAVHLACLEEFAART-DRQGNLLFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQ 210 (553)
T ss_pred cccCCCchhhhhhhHHHHHHHHHHhhCC-CCCCcEEEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCC
Confidence 578999 6799999999999999874 789999999999999 56677754421 000 1233 4444443211
Q ss_pred --CCceEEEeccCccccceeEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHh---hhccCCCC-CCeEEEEEEEec
Q 021336 82 --LPTGTVGSRPGPLLAGSGRFTAVIKGKGGHAAMPQDTRDPVLAASFAILTLQHI---VSRETDPL-EARVVTVGFIDA 155 (314)
Q Consensus 82 --~~~g~v~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~~~nAi~~~~~~i~~l~~~---~~~~~~~~-~~~~~~v~~i~g 155 (314)
...+.. ...|.. |..---.-+.|...|.+.|..|+||...+++++..|+.. .++..... .+.++ .-.-.-
T Consensus 211 ~dGd~~ry-vYtGti--GKLLp~f~vvG~etHvG~~f~Gvnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~-L~qkDl 286 (553)
T COG4187 211 GDGDQGRY-VYTGTI--GKLLPFFFVVGCETHVGYPFEGVNANFMASEITRRLELNADLADRVDGEITPPPSC-LEQKDL 286 (553)
T ss_pred CCCccceE-EEeccc--hhhcceeEEEeeccccCCcccCCCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHh-hhhhhh
Confidence 111221 112222 444455678999999999999999999999999988632 22221110 01111 000011
Q ss_pred CCCCcc-ccCcEEEEEEEecCCHHHHHHHHHHHHH
Q 021336 156 GQAGNI-IPEIVRFGGTFRSLTTEGLLYLEQRIKE 189 (314)
Q Consensus 156 G~~~nv-ip~~~~~~~~~R~~~~~~~~~~~~~i~~ 189 (314)
-+..|| -|.++++.|++=+... +.+++.+.+++
T Consensus 287 Ke~Y~VqTp~~a~~~fN~l~h~~-ta~~~~d~l~~ 320 (553)
T COG4187 287 KESYNVQTPERAWLYFNWLYHSR-TAKELFDRLKE 320 (553)
T ss_pred hhhccccCcchhhhhheehhhcC-CHHHHHHHHHH
Confidence 124455 3788888888765532 23334333333
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=98.57 E-value=1.2e-06 Score=78.36 Aligned_cols=72 Identities=22% Similarity=0.125 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh---cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 021336 220 DEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAA 296 (314)
Q Consensus 220 d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~ 296 (314)
++.+.+.+.+++++. +++.... ....++||++.+... +|++...+|... +|+ -|.++++++..+++
T Consensus 265 ~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~~gtDa~~~~~~~~Gi~t~~i~iP~Ry--------~Hs-~e~~~~~D~~~~~~ 333 (343)
T TIGR03106 265 DYHLTRKLIRLCQDH-GIPHRRD-VFRYYRSDAASAVEAGHDIRTALVTFGLDA--------SHG-YERTHIDALEALAN 333 (343)
T ss_pred CHHHHHHHHHHHHHc-CCCcEEE-ecCCCCChHHHHHHcCCCCCEEEeeccccc--------hhh-hhhccHHHHHHHHH
Confidence 777888888888887 8765321 234468998887654 898876666544 999 99999999999999
Q ss_pred HHHHHH
Q 021336 297 LHAAVA 302 (314)
Q Consensus 297 ~~~~~l 302 (314)
+++.++
T Consensus 334 Ll~~~~ 339 (343)
T TIGR03106 334 LLVAYA 339 (343)
T ss_pred HHHHHh
Confidence 888765
No 69
>PRK09961 exoaminopeptidase; Provisional
Probab=98.44 E-value=1.4e-06 Score=78.17 Aligned_cols=78 Identities=18% Similarity=0.115 Sum_probs=59.3
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHh--h-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHH
Q 021336 218 VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 294 (314)
Q Consensus 218 ~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~--~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~ 294 (314)
..|+++.+.+++++++. +++... .....++||++.+.. . +|++.+++|.. .+|+++|+++++++..+
T Consensus 253 i~~~~l~~~l~~~A~~~-~Ip~Q~-~~~~ggGTDa~~~~~~~~Giptv~ig~p~r--------y~Hs~~E~v~~~D~~~~ 322 (344)
T PRK09961 253 IAPPKLTAWIETVAAEI-GIPLQA-DMFSNGGTDGGAVHLTGTGVPTVVMGPATR--------HGHCAASIADCRDILQM 322 (344)
T ss_pred CCCHHHHHHHHHHHHHc-CCCcEE-EecCCCcchHHHHHHhCCCCCEEEechhhh--------cccChhheEEHHHHHHH
Confidence 35788888998888888 765421 123446799997765 4 89887555532 39999999999999999
Q ss_pred HHHHHHHHHHH
Q 021336 295 AALHAAVAISY 305 (314)
Q Consensus 295 ~~~~~~~l~~l 305 (314)
++++..++..+
T Consensus 323 ~~Ll~~~i~~l 333 (344)
T PRK09961 323 IQLLSALIQRL 333 (344)
T ss_pred HHHHHHHHHHc
Confidence 99999988543
No 70
>PRK09864 putative peptidase; Provisional
Probab=98.11 E-value=8.7e-05 Score=66.59 Aligned_cols=77 Identities=18% Similarity=0.150 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh---cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHH
Q 021336 219 NDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGA 295 (314)
Q Consensus 219 ~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~ 295 (314)
.++.+.+.+.++.++. |++.... ....++||++.+... +|++...+|.+. +|+|.|-++++++..++
T Consensus 262 ~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~i~~~~~Gvpt~~isiP~RY--------~Hs~~e~~~~~D~e~~~ 331 (356)
T PRK09864 262 PNQKLVAALKSCAAHN-DLPLQFS-TMKTGATDGGRYNVMGGGRPVVALCLPTRY--------LHANSGMISKADYDALL 331 (356)
T ss_pred CCHHHHHHHHHHHHHc-CCCceEE-EcCCCCchHHHHHHhCCCCcEEEEeeccCc--------CCCcceEeEHHHHHHHH
Confidence 4777888888888888 8764321 244478999887653 898887777654 99999999999999999
Q ss_pred HHHHHHHHHH
Q 021336 296 ALHAAVAISY 305 (314)
Q Consensus 296 ~~~~~~l~~l 305 (314)
+++..++.++
T Consensus 332 ~Ll~~~~~~l 341 (356)
T PRK09864 332 TLIRDFLTTL 341 (356)
T ss_pred HHHHHHHHhc
Confidence 9999988764
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=98.10 E-value=8e-05 Score=66.36 Aligned_cols=79 Identities=22% Similarity=0.114 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh---cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 021336 220 DEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIGAA 296 (314)
Q Consensus 220 d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~~~ 296 (314)
++.+.+.|.+++++. +++.... ....++||++-+... +|+...++|... .|+|.|.++++++..+.+
T Consensus 268 ~~~l~~~L~~~A~~~-~Ip~Q~~-v~~~ggTDA~a~~~~g~gvpta~Igip~ry--------~Hs~~e~~~~~D~~~~~~ 337 (355)
T COG1363 268 HPKLRKFLLELAEKN-NIPYQVD-VSPGGGTDAGAAHLTGGGVPTALIGIPTRY--------IHSPVEVAHLDDLEATVK 337 (355)
T ss_pred CHHHHHHHHHHHHHc-CCCeEEE-ecCCCCccHHHHHHcCCCCceEEEeccccc--------ccCcceeecHHHHHHHHH
Confidence 666777777777777 7764321 133378998887765 898875555433 999999999999999999
Q ss_pred HHHHHHHHHhcc
Q 021336 297 LHAAVAISYLDN 308 (314)
Q Consensus 297 ~~~~~l~~l~~~ 308 (314)
++..++.++-.+
T Consensus 338 Ll~~~i~~~~~~ 349 (355)
T COG1363 338 LLVAYLESLDRE 349 (355)
T ss_pred HHHHHHHhcchh
Confidence 999888776544
No 72
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=97.44 E-value=0.00025 Score=63.70 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=64.1
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHH--HHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHH
Q 021336 218 VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFS--FYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 294 (314)
Q Consensus 218 ~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~--~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~ 294 (314)
..++.+.+.+.++.++. +++.. .....|+||++ ++... +|++...+|... +|++.|.++++++..+
T Consensus 262 i~~~~l~~~l~~~A~~~-~I~~Q--~~~~~gGtDa~~~~~~~~Gvpt~~i~ip~Ry--------~Hs~~e~i~~~D~~~~ 330 (350)
T TIGR03107 262 IMLPRMKDFLLTTAEEA-GIKYQ--YYVAKGGTDAGAAHLKNSGVPSTTIGVCARY--------IHSHQTLYSIDDFLAA 330 (350)
T ss_pred CCCHHHHHHHHHHHHHc-CCCcE--EecCCCCchHHHHHHhCCCCcEEEEccCccc--------ccChhheeeHHHHHHH
Confidence 45889999999999998 98753 24556799999 56656 999887777554 9999999999999999
Q ss_pred HHHHHHHHHHH
Q 021336 295 AALHAAVAISY 305 (314)
Q Consensus 295 ~~~~~~~l~~l 305 (314)
++++..++.++
T Consensus 331 ~~Ll~~~i~~l 341 (350)
T TIGR03107 331 QAFLQAIVKKL 341 (350)
T ss_pred HHHHHHHHHhc
Confidence 99999988765
No 73
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=97.30 E-value=0.00024 Score=57.74 Aligned_cols=63 Identities=27% Similarity=0.430 Sum_probs=49.7
Q ss_pred ccCh--hH-HHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcC--CCCccceeeEec
Q 021336 15 HGCG--HD-VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEG--AVDKFQGMFGIH 77 (314)
Q Consensus 15 ~~~G--~d-~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~--~~~~~d~~i~~~ 77 (314)
...| +| ++++++|+.++.|++.+.+++++|+|+|..+|| +..|+++++++. ..++..++|.++
T Consensus 20 ~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~~~~~~~~~~~inlD 88 (179)
T PF04389_consen 20 WSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHDHEELDNIAAVINLD 88 (179)
T ss_dssp SSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHHHCHHHHEEEEEEEC
T ss_pred ccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhhhcccccceeEEecc
Confidence 5666 34 699999999999999888889999999999999 667999999631 122566777765
No 74
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=96.89 E-value=0.0017 Score=57.88 Aligned_cols=49 Identities=27% Similarity=0.301 Sum_probs=40.8
Q ss_pred cccCh---hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHc
Q 021336 14 MHGCG---HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKE 64 (314)
Q Consensus 14 ~~~~G---~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~ 64 (314)
.+++| ++++++++|++++.|++.+ ++++|.|+++++|| +..|+++++++
T Consensus 136 ~~~~GA~DnasGvA~lLe~ar~l~~~~--~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 136 LTLQGMDDNAAGLGVMLELAERLKNVP--TEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred cccCCccccHHHHHHHHHHHHHHhhCC--CCCcEEEEEECCcccCcHHHHHHHHh
Confidence 34556 3489999999999998654 77899999999999 56799999875
No 75
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=96.64 E-value=0.0045 Score=54.37 Aligned_cols=67 Identities=28% Similarity=0.337 Sum_probs=49.9
Q ss_pred cccCCCCccccChhH--HHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEec
Q 021336 6 HKSKNNGKMHGCGHD--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIH 77 (314)
Q Consensus 6 ~~~~~~g~~~~~G~d--~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~ 77 (314)
|.....+.+-|+..| .++++++.+++.|++.+ ++.+|+|+|++.|| +..|++....+ + ++|..|.++
T Consensus 120 ~~~~~~~~i~gkalDdR~g~~~lle~l~~l~~~~--~~~~v~~v~tvqEEvG~rGA~~aa~~--i-~PD~ai~vD 189 (292)
T PF05343_consen 120 FRELGNGRIVGKALDDRAGCAVLLELLRELKEKE--LDVDVYFVFTVQEEVGLRGAKTAAFR--I-KPDIAIAVD 189 (292)
T ss_dssp -EEETTTEEEETTHHHHHHHHHHHHHHHHHTTSS---SSEEEEEEESSCTTTSHHHHHHHHH--H--CSEEEEEE
T ss_pred eEEeCCCEEEEEeCCchhHHHHHHHHHHHHhhcC--CCceEEEEEEeeeeecCcceeecccc--c-CCCEEEEEe
Confidence 333445556666644 89999999999999875 56999999999999 66788877654 2 589988875
No 76
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=96.36 E-value=0.011 Score=53.24 Aligned_cols=64 Identities=20% Similarity=0.175 Sum_probs=49.8
Q ss_pred CccccCh--hHHHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCCCccceeeEeccCC
Q 021336 12 GKMHGCG--HDVHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAVDKFQGMFGIHISP 80 (314)
Q Consensus 12 g~~~~~G--~d~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~~~~d~~i~~~~~~ 80 (314)
+.+-|.. +..++++++.+++.|++. +++.+|+++|++.|| +..|++..... -++|.+|+++..+
T Consensus 170 ~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~---i~pD~aI~vDv~~ 236 (350)
T TIGR03107 170 KNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK---FNPDIFFAVDCSP 236 (350)
T ss_pred CEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh---CCCCEEEEEecCC
Confidence 4444555 448999999999999865 478999999999999 66888876543 2689999998654
No 77
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=94.62 E-value=0.026 Score=49.58 Aligned_cols=70 Identities=21% Similarity=0.307 Sum_probs=55.6
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCcccCCCCCCCCcHHHHHhh---cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHH
Q 021336 218 VNDEKMYEHGKRVGASMVGEPNVHLTPVEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 294 (314)
Q Consensus 218 ~~d~~l~~~l~~~~~~~~g~~~~~~~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~ 294 (314)
..++.+.+.+.+++++. +++.... ....++||++.+... +|++...+|... .|+|.|.++++++..+
T Consensus 220 i~~~~l~~~l~~~A~~~-~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i~iP~ry--------~Hs~~e~~~~~Di~~~ 289 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEEN-GIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVISIPCRY--------MHSPVEVIDLDDIEAT 289 (292)
T ss_dssp ESHHHHHHHHHHHHHHT-T--EEEE-EESSSSSTHHHHHTSTTSSEEEEEEEEEBS--------TTSTTEEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEEE-ecCCcccHHHHHHHcCCCCCEEEEeccccc--------CCCcceEEEHHHHHHH
Confidence 35788999999999999 9875422 466789999999864 798887788765 9999999999999988
Q ss_pred HHH
Q 021336 295 AAL 297 (314)
Q Consensus 295 ~~~ 297 (314)
+++
T Consensus 290 ~~L 292 (292)
T PF05343_consen 290 IDL 292 (292)
T ss_dssp HHH
T ss_pred hhC
Confidence 764
No 78
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=94.21 E-value=0.11 Score=48.51 Aligned_cols=64 Identities=28% Similarity=0.276 Sum_probs=48.2
Q ss_pred CccccCh--hH-HHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCccHHHHHHcCCC---CccceeeEec
Q 021336 12 GKMHGCG--HD-VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKEGAV---DKFQGMFGIH 77 (314)
Q Consensus 12 g~~~~~G--~d-~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~~~---~~~d~~i~~~ 77 (314)
++-.+.| +| ++++++|++++.|++.. ++++|.|++...|| +..|+.+++.+... +....++.++
T Consensus 219 s~~~~~GA~DNasGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~~~~~~~~~~viN~D 289 (435)
T COG2234 219 SVPTGPGADDNASGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLSKDLDKKIALVINLD 289 (435)
T ss_pred CCcCCCCcccccHHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCCcchhhhhheEEecc
Confidence 3344556 34 69999999999999876 89999999999999 66899999887541 2334455544
No 79
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=92.52 E-value=0.15 Score=50.36 Aligned_cols=63 Identities=21% Similarity=0.299 Sum_probs=49.0
Q ss_pred ccChhHH-HHHHHHHHHHHHHhcccCCCceEEEEeecCCCC-CccHHHHHHcCC-CCccceeeEec
Q 021336 15 HGCGHDV-HTTILLGAARLLKHRMDRLKGTVKLVFQPGEEG-YGGAYYMIKEGA-VDKFQGMFGIH 77 (314)
Q Consensus 15 ~~~G~d~-~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE~-~~G~~~l~~~~~-~~~~d~~i~~~ 77 (314)
.|-|+|| .+|++|++++.+.+....+.++|+|+|..+||. .-|+..++.|+. -+...+++.++
T Consensus 159 ~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 159 PGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred CCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEecc
Confidence 3444675 788999999999998878899999999999994 468877777543 33566777765
No 80
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=91.08 E-value=0.82 Score=38.77 Aligned_cols=48 Identities=29% Similarity=0.343 Sum_probs=38.2
Q ss_pred cChhH---HHHHHHHHHHHHHHhc---ccCCCceEEEEeecCCC-CCccHHHHHH
Q 021336 16 GCGHD---VHTTILLGAARLLKHR---MDRLKGTVKLVFQPGEE-GYGGAYYMIK 63 (314)
Q Consensus 16 ~~G~d---~~~a~~l~A~~~l~~~---~~~l~~~i~~i~~~dEE-~~~G~~~l~~ 63 (314)
+.|.| .+++++|+|+++|.+. ...++++|.|.|..+|. +.-|++.++.
T Consensus 19 s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vy 73 (234)
T PF05450_consen 19 SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVY 73 (234)
T ss_pred CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHH
Confidence 34544 6999999999999865 24678999999999999 5568887764
No 81
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=89.63 E-value=0.75 Score=43.22 Aligned_cols=81 Identities=9% Similarity=-0.040 Sum_probs=61.1
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCccc--CCCCCCCCcHHHHHhh---cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchH
Q 021336 218 VNDEKMYEHGKRVGASMVGEPNVHL--TPVEMGAEDFSFYTQR---MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALP 292 (314)
Q Consensus 218 ~~d~~l~~~l~~~~~~~~g~~~~~~--~~~~~g~tD~~~~~~~---ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~ 292 (314)
..|..+...+++++++. |++.... ....++|+|++.+... +|++-.++|.. .+|++.|-+..+++.
T Consensus 372 ~td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvDiGiP~l--------~MHS~rE~~~~~D~~ 442 (465)
T PTZ00371 372 ATNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVDIGIPQL--------AMHSIREMCGVVDIY 442 (465)
T ss_pred ccCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEEechhhc--------ccccHHHHccHHHHH
Confidence 35788999999999998 8864221 1245568888887763 88877555533 399999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 021336 293 IGAALHAAVAISYLD 307 (314)
Q Consensus 293 ~~~~~~~~~l~~l~~ 307 (314)
.+.+++..++..|..
T Consensus 443 ~~~~l~~af~~~~~~ 457 (465)
T PTZ00371 443 YLVKLIKAFFTNYSK 457 (465)
T ss_pred HHHHHHHHHHHhhhh
Confidence 999999888775543
No 82
>PRK02256 putative aminopeptidase 1; Provisional
Probab=89.45 E-value=0.48 Score=44.34 Aligned_cols=74 Identities=11% Similarity=0.014 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHhhcCCCCcccCC----CCCCCCcHHHHHhh-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHHH
Q 021336 220 DEKMYEHGKRVGASMVGEPNVHLTP----VEMGAEDFSFYTQR-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPIG 294 (314)
Q Consensus 220 d~~l~~~l~~~~~~~~g~~~~~~~~----~~~g~tD~~~~~~~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~~ 294 (314)
|..++..+.+++++. +++...... ...|+||.-.+++. +|++-.++|.. .+|++.|-+..+++..+
T Consensus 381 ~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~l--------~MHS~rE~~~~~D~~~~ 451 (462)
T PRK02256 381 NAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVALL--------SMHSPFEIASKADIYET 451 (462)
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhhh--------ccccHHHHhhHHHHHHH
Confidence 778889999999988 886421111 12578997777755 99887555543 39999999999999999
Q ss_pred HHHHHHHH
Q 021336 295 AALHAAVA 302 (314)
Q Consensus 295 ~~~~~~~l 302 (314)
++++..++
T Consensus 452 ~~ll~~f~ 459 (462)
T PRK02256 452 YKAYKAFL 459 (462)
T ss_pred HHHHHHHH
Confidence 99987765
No 83
>PRK02813 putative aminopeptidase 2; Provisional
Probab=88.47 E-value=0.69 Score=43.00 Aligned_cols=75 Identities=11% Similarity=-0.055 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcccC--CCCCCCCcHHHHHh--h-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCchHH
Q 021336 219 NDEKMYEHGKRVGASMVGEPNVHLT--PVEMGAEDFSFYTQ--R-MPAAHFYVGTRNETLKPFIRLHSPYLVVDEDALPI 293 (314)
Q Consensus 219 ~d~~l~~~l~~~~~~~~g~~~~~~~--~~~~g~tD~~~~~~--~-ip~~~~~~g~~~~~~~~~~~~H~~~E~i~~~~l~~ 293 (314)
.|......+.+++++. +++..... ...++|+|++.+.. . +|++-.++|.. .+|++.|-+..+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdiGiP~l--------~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDVGAPML--------AMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEeChhhc--------ccccHHHHccHHHHHH
Confidence 5777889999999988 88643211 23357899888876 3 88877555543 3999999999999999
Q ss_pred HHHHHHHHH
Q 021336 294 GAALHAAVA 302 (314)
Q Consensus 294 ~~~~~~~~l 302 (314)
+.+++..++
T Consensus 417 ~~~l~~~f~ 425 (428)
T PRK02813 417 LIKALTAFF 425 (428)
T ss_pred HHHHHHHHh
Confidence 999887654
No 84
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=87.49 E-value=1.3 Score=42.02 Aligned_cols=44 Identities=16% Similarity=0.267 Sum_probs=39.2
Q ss_pred CCeEEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHH
Q 021336 144 EARVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEM 193 (314)
Q Consensus 144 ~~~~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~ 193 (314)
..+++|++.|.++ |+++.+.+++|+++.++.+.+.+.|++.++.
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~ 379 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKL 379 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhh
Confidence 3568899998875 6899999999999999999999999999875
No 85
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=79.91 E-value=2.2 Score=42.06 Aligned_cols=44 Identities=34% Similarity=0.298 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHH---HHhcccCCCceEEEEeecCCC-CCccHHHHHHc
Q 021336 21 VHTTILLGAARL---LKHRMDRLKGTVKLVFQPGEE-GYGGAYYMIKE 64 (314)
Q Consensus 21 ~~~a~~l~A~~~---l~~~~~~l~~~i~~i~~~dEE-~~~G~~~l~~~ 64 (314)
+|.+.++...+. +++.|++|.++|+|+...+|| +.-|+-.++++
T Consensus 373 sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 373 SGTALLLEIARALSKLKKRGWRPRRTILFASWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred ccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchhccccccHHHHHH
Confidence 677766555554 456789999999999999999 66799988875
No 86
>PRK02256 putative aminopeptidase 1; Provisional
Probab=54.31 E-value=20 Score=33.72 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=30.9
Q ss_pred CCCccccChhH--HHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCc
Q 021336 10 NNGKMHGCGHD--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYG 56 (314)
Q Consensus 10 ~~g~~~~~G~d--~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~ 56 (314)
++..+.+.+.| .++.+++.|+..++ .+...++++++..|| ++.
T Consensus 250 ~~efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ 295 (462)
T PRK02256 250 DRSLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSE 295 (462)
T ss_pred ccceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCc
Confidence 34466777754 67778788877654 356799999999999 543
No 87
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=53.36 E-value=36 Score=32.33 Aligned_cols=43 Identities=19% Similarity=0.260 Sum_probs=34.8
Q ss_pred eEEEEEEEecCCCCccccCcEEEEEEEecCCHHHHHHHHHHHHHHHHHH
Q 021336 146 RVVTVGFIDAGQAGNIIPEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQ 194 (314)
Q Consensus 146 ~~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~ 194 (314)
++.|++.+.- --+.|++.+++|+++..+.+.+.+++++..+..
T Consensus 344 ~S~Nlg~v~~------~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~~~ 386 (485)
T PRK15026 344 TSLNVGVVTM------TDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLA 386 (485)
T ss_pred eeeEEEEEEE------eCCEEEEEEEecCCCchHHHHHHHHHHHHHHHc
Confidence 5667766553 337799999999999999999999999987653
No 88
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=45.60 E-value=1.3e+02 Score=28.11 Aligned_cols=40 Identities=13% Similarity=0.131 Sum_probs=28.2
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCC-chHHHHHHHHHHHHHHhccccc
Q 021336 266 VGTRNETLKPFIRLHSPYLVVDED-ALPIGAALHAAVAISYLDNLEV 311 (314)
Q Consensus 266 ~g~~~~~~~~~~~~H~~~E~i~~~-~l~~~~~~~~~~l~~l~~~~~~ 311 (314)
+||-..+ .|.+-|++... ++..--+++..++..+++..+.
T Consensus 511 ~Gp~GkD------~HkwtERvy~PYsF~VLP~Lvs~t~~~fL~~~r~ 551 (553)
T COG4187 511 LGPWGKD------FHKWTERVYKPYSFEVLPELVSETTEAFLGDDRH 551 (553)
T ss_pred cccccCc------HHHHHHHhcCCcchhhhHHHHHHHHHHHhhhccc
Confidence 4555544 79999998754 5555567777788888887764
No 89
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=42.18 E-value=51 Score=22.76 Aligned_cols=29 Identities=14% Similarity=0.161 Sum_probs=24.0
Q ss_pred cEEEEEEEecCCHHHHHHHHHHHHHHHHH
Q 021336 165 IVRFGGTFRSLTTEGLLYLEQRIKEVIEM 193 (314)
Q Consensus 165 ~~~~~~~~R~~~~~~~~~~~~~i~~~i~~ 193 (314)
+.+.++.+|.+++..-.++.++|.+.++-
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl 36 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLEL 36 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCC
Confidence 34568999999999999999999887654
No 90
>PRK06156 hypothetical protein; Provisional
Probab=41.32 E-value=2.1e+02 Score=27.47 Aligned_cols=24 Identities=17% Similarity=0.162 Sum_probs=20.2
Q ss_pred EEEEEEecCCCCccccCcEEEEEE
Q 021336 148 VTVGFIDAGQAGNIIPEIVRFGGT 171 (314)
Q Consensus 148 ~~v~~i~gG~~~nvip~~~~~~~~ 171 (314)
.++..++||+..|+||+.|.+.+.
T Consensus 241 ~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 241 AEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred eeEEEEEcCCcCCCCCCccEEEEe
Confidence 457778999999999999998843
No 91
>PRK02813 putative aminopeptidase 2; Provisional
Probab=39.63 E-value=35 Score=31.85 Aligned_cols=44 Identities=23% Similarity=0.049 Sum_probs=30.9
Q ss_pred CCccccChhH--HHHHHHHHHHHHHHhcccCCCceEEEEeecCCC-CCc---cHH
Q 021336 11 NGKMHGCGHD--VHTTILLGAARLLKHRMDRLKGTVKLVFQPGEE-GYG---GAY 59 (314)
Q Consensus 11 ~g~~~~~G~d--~~~a~~l~A~~~l~~~~~~l~~~i~~i~~~dEE-~~~---G~~ 59 (314)
.+.+.+.+.| ..+.+++.|+..+++ ..+++++++..|| ++. |+.
T Consensus 225 ~e~i~s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~ 274 (428)
T PRK02813 225 GEFISSGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGAD 274 (428)
T ss_pred CCEEEEecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccC
Confidence 4456666755 677777777766542 6799999999999 554 655
No 92
>PF03755 YicC_N: YicC-like family, N-terminal region ; InterPro: IPR013527 Proteins in this entry are homologues of YicC (P23839 from SWISSPROT) from Escherichia coli. Although it is relatively poorly characterised YicC has been shown to be important for cells in the stationary phase, and essential for growth at high temperatures []. This domain is found at the N-terminal region of these proteins.
Probab=34.39 E-value=2.3e+02 Score=22.27 Aligned_cols=64 Identities=13% Similarity=0.069 Sum_probs=37.1
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecccccCCCCccCCHHHHHHHHHHHHhh
Q 021336 168 FGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATIDFLEEKMRHYPATVNDEKMYEHGKRVGASM 234 (314)
Q Consensus 168 ~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~ 234 (314)
+.+.+|+|.. ...++..|++.+.+.-..=.+++.+..... ........-|.++++...++++++
T Consensus 31 Ldi~~rlP~~--l~~lE~~ir~~i~~~l~RGkV~v~i~~~~~-~~~~~~~~in~~l~~~y~~~l~~l 94 (159)
T PF03755_consen 31 LDISIRLPRE--LSSLEPEIRKLIRKKLSRGKVEVSIRVERS-SESAVELRINEELAKAYYEALKEL 94 (159)
T ss_pred eeeEEeCCHH--HHHHHHHHHHHHHHhcccceEEEEEEEEEC-cccCCCcccCHHHHHHHHHHHHHH
Confidence 5667777765 457777888887764332223444433211 112334556888887777777765
No 93
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=34.07 E-value=64 Score=22.15 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=26.3
Q ss_pred cEEEEEEEecCCHHHHHHHHHHHHHHHHHHH
Q 021336 165 IVRFGGTFRSLTTEGLLYLEQRIKEVIEMQA 195 (314)
Q Consensus 165 ~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~ 195 (314)
+|++++.+|.+++.+...+.+.|.+.++..+
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~~ 34 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQA 34 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCCh
Confidence 6889999999999999999888888776543
No 94
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=33.69 E-value=70 Score=30.28 Aligned_cols=48 Identities=15% Similarity=0.088 Sum_probs=28.7
Q ss_pred CCCccccChhH--HHHHHHHHHHHHHHhcccCCCceEEEEe-ecCCC-CCcc
Q 021336 10 NNGKMHGCGHD--VHTTILLGAARLLKHRMDRLKGTVKLVF-QPGEE-GYGG 57 (314)
Q Consensus 10 ~~g~~~~~G~d--~~~a~~l~A~~~l~~~~~~l~~~i~~i~-~~dEE-~~~G 57 (314)
....+.+.+.| ..+.+++.|+..++..-...+..+.+++ ...|| ++.|
T Consensus 241 ~~e~i~s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs~g 292 (465)
T PTZ00371 241 NEEFISSPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGSSS 292 (465)
T ss_pred CCCeEEEecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCCCc
Confidence 44567777755 6777777777765432002344566655 88888 5443
No 95
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=33.50 E-value=56 Score=27.82 Aligned_cols=63 Identities=17% Similarity=0.152 Sum_probs=44.5
Q ss_pred cChhHHHHHHHHHHHHHH--HhcccCCCceEEEEeecCCC--C--------C---ccHHHHHHcCCCCccceeeEecc
Q 021336 16 GCGHDVHTTILLGAARLL--KHRMDRLKGTVKLVFQPGEE--G--------Y---GGAYYMIKEGAVDKFQGMFGIHI 78 (314)
Q Consensus 16 ~~G~d~~~a~~l~A~~~l--~~~~~~l~~~i~~i~~~dEE--~--------~---~G~~~l~~~~~~~~~d~~i~~~~ 78 (314)
-++.||.++++..|++.+ ++.|+.|++++++.--.+-- . + -+...+.+.......|+++..+-
T Consensus 53 VSDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDT 130 (276)
T PF06675_consen 53 VSDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDT 130 (276)
T ss_pred eecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEec
Confidence 444678888888888865 46789999999997655443 1 0 25666666655557899988774
No 96
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT. The function is unknown for this protein family, but members are found almost always in operons for the the SUF system of iron-sulfur cluster biosynthesis. The SUF system is present elsewhere on the chromosome for those few species where SUF genes are not adjacent. This family shares this property of association with the SUF system with a related family, TIGR02945. TIGR02945 consists largely of a DUF59 domain (see Pfam family pfam01883), while this protein is about double the length, with a unique N-terminal domain and DUF59 C-terminal domain. A location immediately downstream of the cysteine desulfurase gene sufS in many contexts suggests the gene symbol sufT. Note that some other homologs of this family and of TIGR02945, but no actual members of this family, are found in operons associated with phenylacetic acid (or other ring-hydroxylating) degradation pathways.
Probab=29.50 E-value=3e+02 Score=22.15 Aligned_cols=29 Identities=10% Similarity=-0.052 Sum_probs=19.0
Q ss_pred cEEEEEEEecCCHHHHHHHHHHHHHHHHH
Q 021336 165 IVRFGGTFRSLTTEGLLYLEQRIKEVIEM 193 (314)
Q Consensus 165 ~~~~~~~~R~~~~~~~~~~~~~i~~~i~~ 193 (314)
++.+.+.+-++.-...+.+.+.+++.+..
T Consensus 114 ~V~I~mtLt~p~c~~~~~L~~dV~~aL~~ 142 (174)
T TIGR03406 114 RVDIEMTLTAPGCGMGPVLVEDVEDKVLA 142 (174)
T ss_pred EEEEEEEeCCCCCcHHHHHHHHHHHHHHh
Confidence 45666666555555667777778877754
No 97
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=24.73 E-value=1.4e+02 Score=28.08 Aligned_cols=24 Identities=25% Similarity=0.239 Sum_probs=20.1
Q ss_pred EEecCCCCccccCcEEEEEEEecC
Q 021336 152 FIDAGQAGNIIPEIVRFGGTFRSL 175 (314)
Q Consensus 152 ~i~gG~~~nvip~~~~~~~~~R~~ 175 (314)
.|.+|+..|.+|+.|++.+-.+..
T Consensus 195 ~~~~Ge~tn~~p~~a~~~v~~~~~ 218 (447)
T TIGR01887 195 SFKAGEAFNMVPDHATAVISGKEL 218 (447)
T ss_pred EEeCCCcCCccCcceEEEEeccch
Confidence 367899999999999999987753
No 98
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=22.60 E-value=3.7e+02 Score=20.88 Aligned_cols=65 Identities=11% Similarity=-0.011 Sum_probs=36.5
Q ss_pred CcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEEEecccccCCCCccCCHHHHHHHHHHHHhhcCCCC
Q 021336 164 EIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQC-SATIDFLEEKMRHYPATVNDEKMYEHGKRVGASMVGEPN 239 (314)
Q Consensus 164 ~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~l~~~~~~~~g~~~ 239 (314)
+.+.+.+..-++--...+.+.+.|++.++.. |. ++++...- .+++ +-+.+...-++.+++. |+.+
T Consensus 25 d~V~VtIt~Ty~gcpa~e~L~~~I~~aL~~~----Gv~~V~V~i~~--~p~W----t~d~it~~gr~~l~~~-giap 90 (146)
T TIGR02159 25 GGVVVKFTPTYSGCPALEVIRQDIRDAVRAL----GVEVVEVSTSL--DPPW----TTDWITEDAREKLREY-GIAP 90 (146)
T ss_pred CEEEEEEEeCCCCCchHHHHHHHHHHHHHhc----CCCeEEEeEee--CCCC----ChHHCCHHHHHHHHhc-CccC
Confidence 5566666666555555677777777777542 43 24443310 2323 2344556666666666 9875
No 99
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=22.47 E-value=1.4e+02 Score=26.14 Aligned_cols=30 Identities=23% Similarity=0.103 Sum_probs=23.6
Q ss_pred EEEEEEEecCCCCccccCcEEEEEEEecCCH
Q 021336 147 VVTVGFIDAGQAGNIIPEIVRFGGTFRSLTT 177 (314)
Q Consensus 147 ~~~v~~i~gG~~~nvip~~~~~~~~~R~~~~ 177 (314)
.+.+..++=|.+.. +|..+.+.+|+|+.|+
T Consensus 161 ~l~v~i~SFGfK~G-iP~dAD~VfDvRfLpN 190 (284)
T PF03668_consen 161 RLTVTIQSFGFKYG-IPPDADLVFDVRFLPN 190 (284)
T ss_pred ceEEEEEEeccccC-CCCCCCEEEEcCcCCC
Confidence 45566666777765 8999999999998875
No 100
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=22.05 E-value=1.8e+02 Score=27.22 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=42.5
Q ss_pred cChhH-HHHHHHHHHHHHHHhc----ccCCCceEEEEeecCCC-CCccHHHHHHcC---CCCccceeeEec
Q 021336 16 GCGHD-VHTTILLGAARLLKHR----MDRLKGTVKLVFQPGEE-GYGGAYYMIKEG---AVDKFQGMFGIH 77 (314)
Q Consensus 16 ~~G~d-~~~a~~l~A~~~l~~~----~~~l~~~i~~i~~~dEE-~~~G~~~l~~~~---~~~~~d~~i~~~ 77 (314)
|.+.| +|+.++|..++.+.+. .-..+.+|.|+.+.+=- +..|++++++-- +-+.+|++++++
T Consensus 234 gADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 234 GADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred CCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 33344 4788888888877764 23457899999987766 556999998721 112578888865
No 101
>cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. This CD includes the second of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. The glycine cleavage enzyme system in Escherichia coli provides one-carbon units for cellular methylation reactions. This enzyme system, encoded by the gcvTHP operon and lpd gene, catalyzes the cleavage of glycine into CO2 + NH3 and transfers a one-carbon unit to tetrahydrofolate, producing 5,10-methylenetetrahydrofolate. The gcvTHP operon is activated by the GcvA protein in response to glycine and repressed by a GcvA/GcvR interaction in the absence of glycine. It has been proposed that the co-activator glycine acts through a mechanism of de-repression by binding to GcvR and preventing GcvR from interacting with GcvA to block GcvA's activator function. Evidence also suggests that GcvR in
Probab=20.39 E-value=2.7e+02 Score=18.42 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=25.6
Q ss_pred cCcEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEE
Q 021336 163 PEIVRFGGTFRSLTTEGLLYLEQRIKEVIEMQAAVHQCSATI 204 (314)
Q Consensus 163 p~~~~~~~~~R~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~ 204 (314)
++...+.+.+..++..+.+++.+.+++..+ ..+.++.+
T Consensus 42 ~~~~~~~~~v~~p~~~~~~~l~~~l~~l~~----~~~~~~~~ 79 (81)
T cd04869 42 TPLFKAQATLALPAGTDLDALREELEELCD----DLNVDISL 79 (81)
T ss_pred cceEEEEEEEecCCCCCHHHHHHHHHHHHH----HhcceEEe
Confidence 366777888888876677777777777643 44655544
Done!