Query 021337
Match_columns 314
No_of_seqs 135 out of 1302
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 09:26:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021337.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021337hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 2.9E-46 6.4E-51 341.4 31.5 265 28-295 61-345 (365)
2 COG0631 PTC1 Serine/threonine 100.0 4.1E-43 8.9E-48 309.3 22.7 244 27-283 3-255 (262)
3 PTZ00224 protein phosphatase 2 100.0 1.1E-41 2.5E-46 312.2 32.3 260 11-288 5-279 (381)
4 KOG0697 Protein phosphatase 1B 100.0 4.5E-39 9.7E-44 271.2 22.3 269 13-288 7-299 (379)
5 cd00143 PP2Cc Serine/threonine 100.0 4E-38 8.7E-43 277.1 29.0 243 33-279 2-254 (254)
6 PF00481 PP2C: Protein phospha 100.0 1E-39 2.2E-44 288.0 15.2 238 33-272 1-254 (254)
7 PRK14559 putative protein seri 100.0 2.6E-38 5.6E-43 305.1 25.5 244 30-284 373-639 (645)
8 smart00332 PP2Cc Serine/threon 100.0 1.7E-37 3.7E-42 273.6 28.5 243 30-277 4-255 (255)
9 KOG0698 Serine/threonine prote 100.0 1.3E-36 2.8E-41 276.6 29.4 251 33-284 41-308 (330)
10 KOG0699 Serine/threonine prote 100.0 2.1E-28 4.5E-33 213.6 19.1 157 124-282 330-505 (542)
11 KOG0700 Protein phosphatase 2C 100.0 2.1E-27 4.6E-32 212.0 20.0 222 44-267 83-378 (390)
12 KOG1379 Serine/threonine prote 99.9 3.1E-23 6.7E-28 179.5 20.2 205 43-279 88-330 (330)
13 KOG1323 Serine/threonine phosp 99.9 3.9E-22 8.5E-27 172.9 17.2 223 58-282 140-489 (493)
14 PF13672 PP2C_2: Protein phosp 99.9 3.3E-20 7.1E-25 159.2 16.7 178 37-248 3-193 (212)
15 KOG0618 Serine/threonine phosp 99.8 3.5E-19 7.7E-24 172.9 15.5 253 32-291 522-783 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.8 3.3E-17 7.1E-22 138.5 20.6 184 32-264 4-192 (193)
17 TIGR02865 spore_II_E stage II 99.7 1.2E-15 2.5E-20 152.6 20.9 199 32-279 552-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.6 6.7E-13 1.5E-17 111.9 19.4 174 61-279 3-192 (193)
19 COG2208 RsbU Serine phosphatas 98.6 7.3E-06 1.6E-10 76.2 20.2 187 45-280 161-366 (367)
20 PRK10693 response regulator of 83.4 15 0.00033 33.1 10.6 102 44-156 148-259 (303)
21 PF09436 DUF2016: Domain of un 43.3 15 0.00033 25.4 1.4 19 220-238 24-42 (72)
22 COG2168 DsrH Uncharacterized c 37.9 17 0.00037 26.6 1.0 48 223-273 25-72 (96)
23 COG3315 O-Methyltransferase in 37.6 51 0.0011 29.7 4.3 90 145-248 104-194 (297)
24 TIGR03735 PRTRC_A PRTRC system 32.1 1.4E+02 0.0031 25.0 5.7 60 219-279 22-102 (192)
25 COG3700 AphA Acid phosphatase 32.0 57 0.0012 27.1 3.2 45 223-267 71-130 (237)
26 PF01436 NHL: NHL repeat; Int 24.6 1.3E+02 0.0028 16.2 3.6 21 131-151 8-28 (28)
27 TIGR02654 circ_KaiB circadian 23.3 2.1E+02 0.0045 20.7 4.5 63 251-314 16-78 (87)
28 PRK09301 circadian clock prote 21.4 2.3E+02 0.005 21.2 4.6 63 251-314 19-81 (103)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=2.9e-46 Score=341.35 Aligned_cols=265 Identities=36% Similarity=0.560 Sum_probs=218.8
Q ss_pred CCCceeEEEeeCCCCCCCCCceEEeeecCC--------CCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHH
Q 021337 28 QNGKFSYGYASSPGKRSSMEDFYETRIDGV--------EGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTK 99 (314)
Q Consensus 28 ~~~~~~~~~~s~~G~r~~neD~~~~~~~~~--------~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~ 99 (314)
-...+.++.+|++|.|+.|||++++..+.. +.....+|+|||||||+.++++|++.+.+.|.+.......+.
T Consensus 61 ~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~ 140 (365)
T PLN03145 61 FIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIE 140 (365)
T ss_pred ccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHH
Confidence 334578999999999999999987643211 122357999999999999999999999999987655445677
Q ss_pred HHHHHHHHHHHHHHHHhcc-ccccccCCeEEEEEEeCCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHhC
Q 021337 100 SAIADAYSHTDSEFLKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAG 178 (314)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~-~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~~~~~i~~~g 178 (314)
..|+.+|.+++..+..... .....+|||++++++.++++|++|+||||+|+++++++++||.||++.++.|+.||...|
T Consensus 141 ~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~G 220 (365)
T PLN03145 141 KVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASG 220 (365)
T ss_pred HHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcC
Confidence 8899999999999876432 223459999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEeCCcceeCCccccccccCCCCCcc-------ceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhH----c
Q 021337 179 GFVMWAGTWRVGGVLAVSRAFGDRLLKQ-------YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----K 247 (314)
Q Consensus 179 ~~~~~~~~~~~~~~~~~tr~lG~~~~~~-------~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l----~ 247 (314)
|.+. ..+..+...+||+||+..++. .+.++|++....+..++++|||||||||++++.+++.+++ .
T Consensus 221 g~v~---~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~ 297 (365)
T PLN03145 221 GYVY---DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQ 297 (365)
T ss_pred Ccee---cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHh
Confidence 8885 335666678999999876542 3578999999999887778899999999999999975444 4
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCceEEEEEEcCCCchhhhcccccccc
Q 021337 248 PIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQELIWHGLQTTQI 295 (314)
Q Consensus 248 ~~~~~~~~a~~l~~~a~~~~~~DNiT~ivv~~~~~~~~~~~~~~~~~~ 295 (314)
...+++++|+.|++.|+++++.||+|||||+|+..+++....-++..+
T Consensus 298 ~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~ 345 (365)
T PLN03145 298 EHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQ 345 (365)
T ss_pred cCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCccccccccccc
Confidence 456899999999999999999999999999999876544444343333
No 2
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-43 Score=309.27 Aligned_cols=244 Identities=31% Similarity=0.428 Sum_probs=210.8
Q ss_pred cCCCceeEEEeeCCCC-CCCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCC-----chh-HH
Q 021337 27 SQNGKFSYGYASSPGK-RSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF-----ISD-TK 99 (314)
Q Consensus 27 ~~~~~~~~~~~s~~G~-r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~-----~~~-~~ 99 (314)
+....+.++..|+.|. |..|||++.+........ ..+++|||||||+.++++|++.+++.|.+.... ..+ ..
T Consensus 3 ~~~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~ 81 (262)
T COG0631 3 SGILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLE 81 (262)
T ss_pred cccceeeeeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHH
Confidence 3456688999999999 899999999986433333 679999999999999999999999998875321 112 67
Q ss_pred HHHHHHHHHHHHHHHHhcc--ccccccCCeEEEEEEeCCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHh
Q 021337 100 SAIADAYSHTDSEFLKSEN--NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDA 177 (314)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~--~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~~~~~i~~~ 177 (314)
+.+.+.+..++..+..... .....||||++++++.++++|++||||||+|++|++.++++|.||++.+..++.++...
T Consensus 82 ~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~ 161 (262)
T COG0631 82 ELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITP 161 (262)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCH
Confidence 8899999999999887753 45567999999999999999999999999999999999999999999998888876555
Q ss_pred CCeEEeCCcceeCCccccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcCCCCHHHHHH
Q 021337 178 GGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAK 257 (314)
Q Consensus 178 g~~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~~~~~~~~a~ 257 (314)
++.. .++.++.+||++|.... ..|++....+.++ |++||||||+|+.+++++|.+++....+++++++
T Consensus 162 ~~~~------~~~~~~~ltralG~~~~-----~~p~~~~~~~~~~-d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~ 229 (262)
T COG0631 162 EEAR------SHPRRNALTRALGDFDL-----LEPDITELELEPG-DFLLLCSDGLWDVVSDDEIVDILKNSETPQEAAD 229 (262)
T ss_pred HHHH------hCccchhhhhhcCCCcc-----cceeEEEEEcCCC-CEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHH
Confidence 4443 33566689999998765 8999999999987 9999999999999999999999998789999999
Q ss_pred HHHHHHHHcCCCCceEEEEEEcCCCc
Q 021337 258 RLMQEAYQRGSADNITCVVVRFLANQ 283 (314)
Q Consensus 258 ~l~~~a~~~~~~DNiT~ivv~~~~~~ 283 (314)
.|++.|+.+++.||+|+|+|++...+
T Consensus 230 ~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 230 KLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred HHHHHHHhcCCCCceEEEEEEeeccc
Confidence 99999999999999999999998765
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.1e-41 Score=312.17 Aligned_cols=260 Identities=37% Similarity=0.557 Sum_probs=212.9
Q ss_pred CcccCCCCCCCCCCcccCCCceeEEEeeCCCCCCCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHh
Q 021337 11 SSQVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIR 90 (314)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~ 90 (314)
.++|..++..... .+..+.++.++.+|.|+.|||++.+... ....+|+|||||||..+++++++.+.+.+.+
T Consensus 5 l~~p~~~~~~~~~----~~~~~~~g~~s~~G~R~~nED~~~v~~~----~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~ 76 (381)
T PTZ00224 5 LPKPVLSKLVDRA----GNSIFRCASACVNGYRESMEDAHLLYLT----DDWGFFGVFDGHVNDECSQYLARAWPQALEK 76 (381)
T ss_pred CCCCccccccccC----CCccEEEEEEeCCCCCCCCCCeeEeccC----CCceEEEEEeCCCcHHHHHHHHHHHHHHHHh
Confidence 3666666555444 4566999999999999999999876422 3446999999999999999999999887765
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhccccccccCCeEEEEEEe-CCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChh
Q 021337 91 HPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTD 169 (314)
Q Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~-~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~ 169 (314)
.... .....|+.++..++..+..... .+|||+++++|. +.+++++|+||||+|++|+|++++||.||++.+..
T Consensus 77 ~~~~--~~~~~l~~a~~~~d~~i~~~~~----~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~ 150 (381)
T PTZ00224 77 EPEP--MTDERMEELCLEIDEEWMDSGR----EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPG 150 (381)
T ss_pred cccc--ccHHHHHHHHHHHHHHHHhccc----CCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHH
Confidence 4322 1234588888899888875432 368999988886 57999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeEEeCCcceeCCccccccccCCCCCc---------cceecCCceEEEEeCCCCeEEEEEcCCCcC-CCCH
Q 021337 170 ERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDGLWD-VVTN 239 (314)
Q Consensus 170 ~~~~i~~~g~~~~~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~i~~~~~~~~~d~llL~SDGv~d-~l~~ 239 (314)
|+.||...++.+. .++..+.+.+||++|+..+| +.+.++|++..+.+.. +|+|||||||||+ .+++
T Consensus 151 E~~RI~~~gg~v~---~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~-~D~llLaSDGL~d~~ls~ 226 (381)
T PTZ00224 151 ERQRIEACGGRVV---SNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQS-NDFIILACDGVFEGNFSN 226 (381)
T ss_pred HHhHHHHccCEec---cccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCC-CCEEEEECCCcCcCccCH
Confidence 9999999998875 34566778899999986543 2355789999888876 4899999999999 7999
Q ss_pred HHHHHhHcC----CCCHHHHHHHHHHHHHHcCCCCceEEEEEEcCCCchhhhc
Q 021337 240 EEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQELIWH 288 (314)
Q Consensus 240 ~~i~~~l~~----~~~~~~~a~~l~~~a~~~~~~DNiT~ivv~~~~~~~~~~~ 288 (314)
++|.+++.. ..+++.+|+.|++.|+.+|+.||+|||||++...+.....
T Consensus 227 eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~~~~~~ 279 (381)
T PTZ00224 227 EEVVAFVKEQLETCDDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGASYAKL 279 (381)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCCChhhh
Confidence 999998863 3689999999999999999999999999999987765443
No 4
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=271.21 Aligned_cols=269 Identities=33% Similarity=0.533 Sum_probs=232.8
Q ss_pred ccCCCCCCCCCCcccCCCceeEEEeeCCCCCCCCCceEEeeec-CCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhC
Q 021337 13 QVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRID-GVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRH 91 (314)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~r~~neD~~~~~~~-~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~ 91 (314)
+|...+.-+.+ +-+.++||..|.+|+|-.+||+...... ...-+++++|+|+|||.|+..+.+|+..+.+.+.+.
T Consensus 7 KPkteKhn~~G----~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~ss 82 (379)
T KOG0697|consen 7 KPKTEKHNAEG----EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISS 82 (379)
T ss_pred CcccccccccC----cCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhh
Confidence 56666666666 5578999999999999999999776433 334578999999999999999999999999988765
Q ss_pred CCCc--------hhHHHHHHHHHHHHHHHHHHhcc--ccccccCCeEEEEEEeCCeEEEEEeccceEEEEeCCeeEEcCC
Q 021337 92 PKFI--------SDTKSAIADAYSHTDSEFLKSEN--NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSR 161 (314)
Q Consensus 92 ~~~~--------~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~r~~~~~~lt~ 161 (314)
.... ++....|+..|.+.+..+..... ....++|||++.+++...++|++|+||||+.+.|+|....-|.
T Consensus 83 e~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~Tq 162 (379)
T KOG0697|consen 83 EEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQ 162 (379)
T ss_pred HHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEecc
Confidence 3322 36778899999888877665432 2233499999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHhCCeEEeCCcceeCCccccccccCCCCCc---------cceecCCceEEEEeCCCCeEEEEEcCC
Q 021337 162 DHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEVIDSSLEFLILASDG 232 (314)
Q Consensus 162 dh~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~i~~~~~~~~~d~llL~SDG 232 (314)
||-+.++.|++||+++||.+. ..|.++.+.++|++|+..+| ++++++|++........++||||+.||
T Consensus 163 DHKP~~p~EkeRIqnAGGSVM---IqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDG 239 (379)
T KOG0697|consen 163 DHKPYLPKEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDG 239 (379)
T ss_pred CCCCCChHHHHHHhcCCCeEE---EEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccc
Confidence 999999999999999999998 66788889999999999988 468999999999988888999999999
Q ss_pred CcCCCCHHHHHHhHcC----CCCHHHHHHHHHHHHHHcCCCCceEEEEEEcCCCchhhhc
Q 021337 233 LWDVVTNEEAVAMIKP----IQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQELIWH 288 (314)
Q Consensus 233 v~d~l~~~~i~~~l~~----~~~~~~~a~~l~~~a~~~~~~DNiT~ivv~~~~~~~~~~~ 288 (314)
+||+++.+++.+++.. ..++.++|+.+++.++-+|++||+|+|++.|...|....+
T Consensus 240 IwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv~~e 299 (379)
T KOG0697|consen 240 IWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKVSIE 299 (379)
T ss_pred hhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCCCHH
Confidence 9999999999999876 3689999999999999999999999999999988765433
No 5
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4e-38 Score=277.07 Aligned_cols=243 Identities=45% Similarity=0.689 Sum_probs=208.6
Q ss_pred eEEEeeCCCCCCCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCC-----chhHHHHHHHHHH
Q 021337 33 SYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF-----ISDTKSAIADAYS 107 (314)
Q Consensus 33 ~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~-----~~~~~~~l~~~~~ 107 (314)
.++..+..|.|+.|||++++...... .+..+++||||+||...+++|++.+++.+.+.... ...+...|+.+|.
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 80 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFL 80 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 46777788889999999998744221 25689999999999999999999999999876543 2456778999999
Q ss_pred HHHHHHHHhcc--ccccccCCeEEEEEEeCCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHhCCeEEeCC
Q 021337 108 HTDSEFLKSEN--NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAG 185 (314)
Q Consensus 108 ~~~~~~~~~~~--~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~~~~~i~~~g~~~~~~~ 185 (314)
.++..+..... .....+|||++++++..++++++|+||||+|++++++++++|.||++.+..+..++...++...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~--- 157 (254)
T cd00143 81 RADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS--- 157 (254)
T ss_pred HHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE---
Confidence 99999877653 2445689999999999999999999999999999999999999999999888899998887643
Q ss_pred cceeCCccccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcCCC---CHHHHHHHHHHH
Q 021337 186 TWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ---DPEEAAKRLMQE 262 (314)
Q Consensus 186 ~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~~~---~~~~~a~~l~~~ 262 (314)
....++.+.+|+++|....++....+|++....+...+|+|||||||||+++++++|.+++.... +++++|+.|++.
T Consensus 158 ~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~ 237 (254)
T cd00143 158 NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDL 237 (254)
T ss_pred eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHH
Confidence 34556777899999998777667899999999884556999999999999999999999998866 799999999999
Q ss_pred HHHcCCCCceEEEEEEc
Q 021337 263 AYQRGSADNITCVVVRF 279 (314)
Q Consensus 263 a~~~~~~DNiT~ivv~~ 279 (314)
|.+++..||+|+|++++
T Consensus 238 a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 238 ALRRGSHDNITVVVVRL 254 (254)
T ss_pred HHhCCCCCCEEEEEEeC
Confidence 99999999999999875
No 6
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=1e-39 Score=288.03 Aligned_cols=238 Identities=49% Similarity=0.734 Sum_probs=197.7
Q ss_pred eEEEeeCCCCCCCCCceEEeeecCC---CCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCc--hhHHHHHHHHHH
Q 021337 33 SYGYASSPGKRSSMEDFYETRIDGV---EGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFI--SDTKSAIADAYS 107 (314)
Q Consensus 33 ~~~~~s~~G~r~~neD~~~~~~~~~---~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~--~~~~~~l~~~~~ 107 (314)
.++..+..|.|+.|||.+.+..... ......+|+|+|||||..++.++++.+.+.+.+..... ..+...|..+|.
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 3788889999999999999876442 45688999999999999999999999998777654322 257888888988
Q ss_pred H-HHHHHHHhccc-cccccCCeEEEEEEeCCeEEEEEeccceEEEEeCCeeE-EcCCCCCCCChhHHHHHHHhCCeEEeC
Q 021337 108 H-TDSEFLKSENN-QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAI-AVSRDHKPDQTDERQRIEDAGGFVMWA 184 (314)
Q Consensus 108 ~-~~~~~~~~~~~-~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~r~~~~~-~lt~dh~~~~~~~~~~i~~~g~~~~~~ 184 (314)
. .+..+...... ....+|||+++++|..+++|++|+||||+|+++++... +||.||++.++.|+.||...|+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 8 66666652211 45569999999999999999999999999999999888 99999999999999999999999877
Q ss_pred CcceeCCccccccccCCCCCcc----ceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcCCCC----HHHHH
Q 021337 185 GTWRVGGVLAVSRAFGDRLLKQ----YVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQD----PEEAA 256 (314)
Q Consensus 185 ~~~~~~~~~~~tr~lG~~~~~~----~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~~~~----~~~~a 256 (314)
..+..+.+.+||+||+..+++ .++++|++..+.+.+.+++|||||||||++++.+++.+++....+ |+.+|
T Consensus 160 -~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a 238 (254)
T PF00481_consen 160 -NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAA 238 (254)
T ss_dssp -TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred -chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHH
Confidence 678888889999999999998 799999999999998867999999999999999999999987544 99999
Q ss_pred HHHHHHHHHcCCCCce
Q 021337 257 KRLMQEAYQRGSADNI 272 (314)
Q Consensus 257 ~~l~~~a~~~~~~DNi 272 (314)
+.|++.|+++|+.|||
T Consensus 239 ~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 239 EKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHHHHTTHHSHE
T ss_pred HHHHHHHHhcCCCCCC
Confidence 9999999999999997
No 7
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=2.6e-38 Score=305.11 Aligned_cols=244 Identities=22% Similarity=0.292 Sum_probs=188.7
Q ss_pred CceeEEEeeCCCC-CCCCCceEEeeecC-----CCC---ceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCC----Cch
Q 021337 30 GKFSYGYASSPGK-RSSMEDFYETRIDG-----VEG---EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPK----FIS 96 (314)
Q Consensus 30 ~~~~~~~~s~~G~-r~~neD~~~~~~~~-----~~~---~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~----~~~ 96 (314)
..+.++.+|++|. |+.|||++.+.... ..+ ....+|+|||||||+.+|+.||+.+++.|.+... ...
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4688999999998 99999998765321 011 1346899999999999999999888887764221 111
Q ss_pred hHHHHHHHHHHHHHHHHHHhcc----ccccccCCeEEEEEEeCCeEEEEEeccceEEEE-eCCeeEEcCCCCCCCChhHH
Q 021337 97 DTKSAIADAYSHTDSEFLKSEN----NQNRDAGSTASTAILVGDRLLVANVGDSRAVIC-RGGNAIAVSRDHKPDQTDER 171 (314)
Q Consensus 97 ~~~~~l~~~~~~~~~~~~~~~~----~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~-r~~~~~~lt~dh~~~~~~~~ 171 (314)
.....+++++..+|..+..... .....||||++++++.++++|++||||||+|++ |+|+++++|+||++.+.+.+
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~ 532 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQ 532 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHH
Confidence 2356789999999999976532 134469999999999999999999999999998 57899999999998765443
Q ss_pred HHHHHhCCeEEeCCcceeCCccccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCC--CCH---HHHHHhH
Q 021337 172 QRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDV--VTN---EEAVAMI 246 (314)
Q Consensus 172 ~~i~~~g~~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~--l~~---~~i~~~l 246 (314)
.++ ........++.+.+||++|....+ ..+|++..+.+.. +|+|||||||||++ +.. +++..++
T Consensus 533 ~Gi-------~~~~a~~~p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~-gD~lLLCSDGL~D~~~ve~~~~~~l~~il 601 (645)
T PRK14559 533 RGV-------EPQIAYARPDAYQLTQALGPRDNS---AIQPDIQFLEIEE-DTLLLLCSDGLSDNDLLETHWQTHLLPLL 601 (645)
T ss_pred hCC-------CHHHHhcCcccceeeeccCCCCCC---cccceEEEEEcCC-CCEEEEECCCCCCCcccchHHHHHHHHHH
Confidence 322 111222335677899999975432 2578998888876 59999999999994 443 4566777
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCCCceEEEEEEcCCCch
Q 021337 247 KPIQDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQE 284 (314)
Q Consensus 247 ~~~~~~~~~a~~l~~~a~~~~~~DNiT~ivv~~~~~~~ 284 (314)
....++.++++.|++.|+.+++.||+|+|||++...|.
T Consensus 602 ~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~ 639 (645)
T PRK14559 602 SSSANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQ 639 (645)
T ss_pred hcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCC
Confidence 77678999999999999999999999999999987665
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.7e-37 Score=273.60 Aligned_cols=243 Identities=48% Similarity=0.744 Sum_probs=208.7
Q ss_pred CceeEEEeeCCCCCCCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCc----hhHHHHHHHH
Q 021337 30 GKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFI----SDTKSAIADA 105 (314)
Q Consensus 30 ~~~~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~----~~~~~~l~~~ 105 (314)
..+.+++.+..|.|..|||++++.... ..+..+++||||+||..+++++++.+.+.+.+..... ..+...|+.+
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~--~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 81 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDL--SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKA 81 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccC--CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHH
Confidence 447788877777799999999987432 1456899999999999999999999999988764333 2477889999
Q ss_pred HHHHHHHHHHhccc--cccccCCeEEEEEEeCCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHhCCeEEe
Q 021337 106 YSHTDSEFLKSENN--QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMW 183 (314)
Q Consensus 106 ~~~~~~~~~~~~~~--~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~~~~~i~~~g~~~~~ 183 (314)
+..++..+...... ....+|||++++++..++++++|+||||+|++|++++.++|+||++.+..+..++...++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~ 161 (255)
T smart00332 82 FLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVIN 161 (255)
T ss_pred HHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEEC
Confidence 99999988776533 2356899999999999999999999999999999999999999999999999999999886642
Q ss_pred CCcceeCCccccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcCCC---CHHHHHHHHH
Q 021337 184 AGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQ---DPEEAAKRLM 260 (314)
Q Consensus 184 ~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~~~---~~~~~a~~l~ 260 (314)
.++++.+.+|+++|....++.+..+|++....+...+|+|||||||||+++++++|.+++.... ++.++++.|+
T Consensus 162 ---~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~ 238 (255)
T smart00332 162 ---GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLI 238 (255)
T ss_pred ---CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 2566778899999998888888899999988874456999999999999999999999998755 5999999999
Q ss_pred HHHHHcCCCCceEEEEE
Q 021337 261 QEAYQRGSADNITCVVV 277 (314)
Q Consensus 261 ~~a~~~~~~DNiT~ivv 277 (314)
+.|.+++..||+|+|++
T Consensus 239 ~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 239 DLALARGSKDNITVIVV 255 (255)
T ss_pred HHHHHcCCCCCeEEEEC
Confidence 99999999999999985
No 9
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=276.57 Aligned_cols=251 Identities=53% Similarity=0.754 Sum_probs=218.0
Q ss_pred eEEEeeCCCCCCCCCceEEeeecCC----CCc-eEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCch---hHHHHHHH
Q 021337 33 SYGYASSPGKRSSMEDFYETRIDGV----EGE-IVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFIS---DTKSAIAD 104 (314)
Q Consensus 33 ~~~~~s~~G~r~~neD~~~~~~~~~----~~~-~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~---~~~~~l~~ 104 (314)
..+.++.+|.|..+||++....... ... ...+|||+|||||..+|+++.+.+...+.+...... .....+++
T Consensus 41 ~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~ 120 (330)
T KOG0698|consen 41 LGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRR 120 (330)
T ss_pred ceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHH
Confidence 3455577777999999988765522 233 578999999999999999999999999998776655 47889999
Q ss_pred HHH-HHHHHHHHhccccccccCCeEEEEEEeCC-eEEEEEeccceEEEEeCC-eeEEcCCCCCCCChhHHHHHHHhCCeE
Q 021337 105 AYS-HTDSEFLKSENNQNRDAGSTASTAILVGD-RLLVANVGDSRAVICRGG-NAIAVSRDHKPDQTDERQRIEDAGGFV 181 (314)
Q Consensus 105 ~~~-~~~~~~~~~~~~~~~~~gtT~~~~~i~~~-~l~~a~vGDsr~yl~r~~-~~~~lt~dh~~~~~~~~~~i~~~g~~~ 181 (314)
+|. +.+..+... .......|+|++++++.++ ++|++|+||||+.+.+.+ ...+||.||.+....|+.||...||.+
T Consensus 121 ~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v 199 (330)
T KOG0698|consen 121 AFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRV 199 (330)
T ss_pred HHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEE
Confidence 999 588888865 2223457888888888855 999999999999999865 899999999999999999999999999
Q ss_pred EeC-CcceeCCccccccccCCCCCc-cceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcC----CCCHHHH
Q 021337 182 MWA-GTWRVGGVLAVSRAFGDRLLK-QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP----IQDPEEA 255 (314)
Q Consensus 182 ~~~-~~~~~~~~~~~tr~lG~~~~~-~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~----~~~~~~~ 255 (314)
... ...|..+.+.++|+||+..++ +.+.++|++....+...++||||+|||+||.++.++..++++. ...+..+
T Consensus 200 ~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a 279 (330)
T KOG0698|consen 200 SNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAA 279 (330)
T ss_pred EEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHH
Confidence 853 347888999999999999999 8899999999999988789999999999999999999999988 5689999
Q ss_pred HHHHHHHHHHcCCCCceEEEEEEcCCCch
Q 021337 256 AKRLMQEAYQRGSADNITCVVVRFLANQE 284 (314)
Q Consensus 256 a~~l~~~a~~~~~~DNiT~ivv~~~~~~~ 284 (314)
+..+...|..++..||+|||||.|...+.
T Consensus 280 ~~~l~~~a~~~~s~DnitvvvV~l~~~~~ 308 (330)
T KOG0698|consen 280 AKLLATEALSRGSKDNITVVVVRLKSSPK 308 (330)
T ss_pred HHHHHHHHhhcCCCCCeEEEEEEecCccc
Confidence 99999999999999999999999988764
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-28 Score=213.63 Aligned_cols=157 Identities=37% Similarity=0.628 Sum_probs=142.4
Q ss_pred cCCeEEEEEEeCCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHhCCeEEeCCcceeCCccccccccCCCC
Q 021337 124 AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRL 203 (314)
Q Consensus 124 ~gtT~~~~~i~~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~tr~lG~~~ 203 (314)
+|||+++|++.+++++++|.||||+.+.|+|+.+-++.||-+....+..||..+||.+... .|.++-++++|+||+..
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlD--GRVNGGLNLSRA~GDHa 407 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLD--GRVNGGLNLSRAFGDHA 407 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeec--ceecCccchhhhhhhhh
Confidence 7999999999999999999999999999999999999999999999999999999999743 46778889999999988
Q ss_pred Cc---------cceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHc----CCCCHHHHHHHHHHHHHHcC---
Q 021337 204 LK---------QYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRG--- 267 (314)
Q Consensus 204 ~~---------~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~----~~~~~~~~a~~l~~~a~~~~--- 267 (314)
+| +.+++-|+|....+++.++|+|++.||+|.+++.+++.++++ .+..+..+|+.|.+.++.-.
T Consensus 408 YK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~G 487 (542)
T KOG0699|consen 408 YKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTDG 487 (542)
T ss_pred hhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCCC
Confidence 87 368999999999999998999999999999999999887775 35689999999999998752
Q ss_pred ---CCCceEEEEEEcCCC
Q 021337 268 ---SADNITCVVVRFLAN 282 (314)
Q Consensus 268 ---~~DNiT~ivv~~~~~ 282 (314)
+.||+|||++.|.+.
T Consensus 488 DGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 488 DGTGCDNMTVIITTFKRK 505 (542)
T ss_pred CCcCCCcceEEEEEeccc
Confidence 469999999999864
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-27 Score=212.02 Aligned_cols=222 Identities=36% Similarity=0.601 Sum_probs=177.8
Q ss_pred CCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHh------------CCCC-----------------
Q 021337 44 SSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIR------------HPKF----------------- 94 (314)
Q Consensus 44 ~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~------------~~~~----------------- 94 (314)
+.-||.+.+... ...++.++||+|||||..++++.++.+..++.. ....
T Consensus 83 ~~~edrv~~~~s--~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~ 160 (390)
T KOG0700|consen 83 KAEEDRVSVAVS--EENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLS 160 (390)
T ss_pred CcccCcceeeee--ccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhccc
Confidence 344566555433 356778999999999999999999999998872 1111
Q ss_pred -----chhHHHHHHHHHHHHHHHHHHhc------cccccccCCeEEEEEEeCCeEEEEEeccceEEEEe---CC---eeE
Q 021337 95 -----ISDTKSAIADAYSHTDSEFLKSE------NNQNRDAGSTASTAILVGDRLLVANVGDSRAVICR---GG---NAI 157 (314)
Q Consensus 95 -----~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~r---~~---~~~ 157 (314)
...+.+.|.++|.+....+...- .+...-+|++|++.++.++.+|+||+||||+.|-+ ++ ...
T Consensus 161 ~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~ 240 (390)
T KOG0700|consen 161 SADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAV 240 (390)
T ss_pred ccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEE
Confidence 34578899999999999886432 33344589999999999999999999999999743 33 467
Q ss_pred EcCCCCCCCChhHHHHHHHhCC---eEEeCCcceeCCccccccccCCCCCc---------------------cceecCCc
Q 021337 158 AVSRDHKPDQTDERQRIEDAGG---FVMWAGTWRVGGVLAVSRAFGDRLLK---------------------QYVVADPE 213 (314)
Q Consensus 158 ~lt~dh~~~~~~~~~~i~~~g~---~~~~~~~~~~~~~~~~tr~lG~~~~~---------------------~~~~~~p~ 213 (314)
|||.||+..++.|.+||....- .+......|..+.++++|+||+..+| |+++++|.
T Consensus 241 qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~ 320 (390)
T KOG0700|consen 241 QLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPS 320 (390)
T ss_pred ecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccce
Confidence 9999999999999999976642 23333446899999999999998777 46999999
Q ss_pred eEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcCC----CCHHHHHHHHHHHHHHcC
Q 021337 214 IQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI----QDPEEAAKRLMQEAYQRG 267 (314)
Q Consensus 214 i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~~----~~~~~~a~~l~~~a~~~~ 267 (314)
+..+.+.+.+.|+||+|||+|++++.+|+.+++... ..-+.+|+.|++.|+.+.
T Consensus 321 i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 321 ITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred EEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 999999999899999999999999999999998773 345667888888887653
No 12
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=3.1e-23 Score=179.53 Aligned_cols=205 Identities=22% Similarity=0.236 Sum_probs=143.4
Q ss_pred CCCCCceEEeeecCCCCceEEEEEEEcCCChHHH-----HH---HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHH
Q 021337 43 RSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARA-----AE---YVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFL 114 (314)
Q Consensus 43 r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~-----~~---~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 114 (314)
.+..||+|++..+ ....+.|||||+||..- +. ...+...+.+.+......++...|..++.+. .
T Consensus 88 ~~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l----~ 159 (330)
T KOG1379|consen 88 GKGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAEL----K 159 (330)
T ss_pred CCCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHH----h
Confidence 3467999999733 45569999999997543 32 2333333344444555567888888776643 3
Q ss_pred HhccccccccCCeEEEEEEe--CCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHhCCeEEeCCcceeCCc
Q 021337 115 KSENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGV 192 (314)
Q Consensus 115 ~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~~~~~i~~~g~~~~~~~~~~~~~~ 192 (314)
....+ .-+++|++++.++ +++||++|+|||.+.++|+|++.+.|..+........ +...++.
T Consensus 160 ~~~~~--~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~Py--------------QLs~~p~ 223 (330)
T KOG1379|consen 160 SQKVP--IVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPY--------------QLSSPPE 223 (330)
T ss_pred hcCCC--CCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCce--------------eeccCCc
Confidence 22221 1267888888888 8999999999999999999999999998875421111 1111111
Q ss_pred cccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcC-----CCCHHHHHHHHHHHHHHc-
Q 021337 193 LAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKP-----IQDPEEAAKRLMQEAYQR- 266 (314)
Q Consensus 193 ~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~-----~~~~~~~a~~l~~~a~~~- 266 (314)
.+ ..++++.. ...+...+.+..+ |+|||+|||+||++.+++|..++.. ..+++..|+.|.+.|.+.
T Consensus 224 ~~-~~~~~d~p------~~ad~~~~~v~~G-DvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls 295 (330)
T KOG1379|consen 224 GY-SSYISDVP------DSADVTSFDVQKG-DVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELS 295 (330)
T ss_pred cc-cccccCCc------cccceEEEeccCC-CEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhc
Confidence 11 33344321 3445677777775 9999999999999999999999965 247999999999998765
Q ss_pred ----------------------CCCCceEEEEEEc
Q 021337 267 ----------------------GSADNITCVVVRF 279 (314)
Q Consensus 267 ----------------------~~~DNiT~ivv~~ 279 (314)
|..||||+||..+
T Consensus 296 ~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 296 RDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 4589999998753
No 13
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.89 E-value=3.9e-22 Score=172.85 Aligned_cols=223 Identities=30% Similarity=0.463 Sum_probs=166.2
Q ss_pred CCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCC-------------------------------------Cc---hh
Q 021337 58 EGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPK-------------------------------------FI---SD 97 (314)
Q Consensus 58 ~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~-------------------------------------~~---~~ 97 (314)
+..++.+|.++|||.|..++-.|++.+.+.+.++.. .. .-
T Consensus 140 ~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~L 219 (493)
T KOG1323|consen 140 PRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHL 219 (493)
T ss_pred CCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHh
Confidence 445778999999999999999999988766654210 00 11
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccccCCeEEEEEEeCCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHh
Q 021337 98 TKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDA 177 (314)
Q Consensus 98 ~~~~l~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~~~~~i~~~ 177 (314)
+.-+|+.+|+..+..|.+....-...+|||+++++.--+|+|++|.||||++++|+++++.++++-++.. |++|++..
T Consensus 220 ViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPet--ERqRlQ~L 297 (493)
T KOG1323|consen 220 VIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPET--ERQRLQEL 297 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHH--HHHHHHHH
Confidence 3567888888888888877665666789999999999999999999999999999999999999988764 56666554
Q ss_pred C--------CeEE--------------------------------------------eCCcceeCCccccccccCCCCCc
Q 021337 178 G--------GFVM--------------------------------------------WAGTWRVGGVLAVSRAFGDRLLK 205 (314)
Q Consensus 178 g--------~~~~--------------------------------------------~~~~~~~~~~~~~tr~lG~~~~~ 205 (314)
. +..+ .....++.+-..++|-+|+..++
T Consensus 298 af~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lk 377 (493)
T KOG1323|consen 298 AFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLK 377 (493)
T ss_pred hhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceee
Confidence 3 1110 01222333445788889987665
Q ss_pred ---------cceecCCceEEEEeC----CCCeEEEEEcCCCcCCCCHHHHHHhHcCC------CCH---HHHHHHHHHHH
Q 021337 206 ---------QYVVADPEIQEEVID----SSLEFLILASDGLWDVVTNEEAVAMIKPI------QDP---EEAAKRLMQEA 263 (314)
Q Consensus 206 ---------~~~~~~p~i~~~~~~----~~~d~llL~SDGv~d~l~~~~i~~~l~~~------~~~---~~~a~~l~~~a 263 (314)
+.+++.|++....+. ..+|++||+|||+||+++.++++.++... .+| ..+|+.|+..|
T Consensus 378 v~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~a 457 (493)
T KOG1323|consen 378 VVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAA 457 (493)
T ss_pred eecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHh
Confidence 457788888888775 45689999999999999999999888653 233 23567777666
Q ss_pred HHc-------------CCCCceEEEEEEcCCC
Q 021337 264 YQR-------------GSADNITCVVVRFLAN 282 (314)
Q Consensus 264 ~~~-------------~~~DNiT~ivv~~~~~ 282 (314)
... ++.|||||.||-+...
T Consensus 458 rg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 458 RGQQKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred cCccCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 432 4679999999988653
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.85 E-value=3.3e-20 Score=159.18 Aligned_cols=178 Identities=23% Similarity=0.316 Sum_probs=97.1
Q ss_pred eeCCCCCCCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHH----HHHHHHHhCCCCchh--HHHHHHHHHHHHH
Q 021337 37 ASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKH----NLFSNLIRHPKFISD--TKSAIADAYSHTD 110 (314)
Q Consensus 37 ~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~----~~~~~l~~~~~~~~~--~~~~l~~~~~~~~ 110 (314)
.+++|.++.|||++.+... .+..+++||||+|+...+..+|+ .+.+.+.+....... ....++.+...+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEIL 78 (212)
T ss_dssp ----TTSSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 4788999999999997643 23357799999996655555554 445555555544322 2333343333333
Q ss_pred HHH-----HHhccccccccCCeEEEEEEeCCeEEEEEeccceEEE-EeCCeeEEcCCCCCCCChhHHHHHHHhCCeEEeC
Q 021337 111 SEF-----LKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVI-CRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWA 184 (314)
Q Consensus 111 ~~~-----~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~yl-~r~~~~~~lt~dh~~~~~~~~~~i~~~g~~~~~~ 184 (314)
..+ ..........++||++++++.+++++++|+||||+|+ .+++++..++.+|+... ..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~~-------~~-------- 143 (212)
T PF13672_consen 79 SIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGEY-------PN-------- 143 (212)
T ss_dssp HHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHHH-------HH--------
T ss_pred HHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccchh-------hh--------
Confidence 222 1112334556889999999999999999999999975 57999999999997210 00
Q ss_pred CcceeCCccccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHH-HHHhHcC
Q 021337 185 GTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEE-AVAMIKP 248 (314)
Q Consensus 185 ~~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~-i~~~l~~ 248 (314)
.+..+.... .....++....+.. ++.|+|||||||+.+...+ +..++..
T Consensus 144 ----------~~~~~~~~~----~~~~~~~~~~~~~~-~d~ilL~SDG~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 144 ----------QTRSLTGDD----PEPDVQYGSIPLEE-GDVILLCSDGVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp ----------CTTSCCHHC----CCTETEEEEEE--T-T-EEEEE-HHHHTTS-HHHHHHHH---
T ss_pred ----------hhhccCccc----cccCCeEEEEEcCC-CCEEEEECcCccccCCCHHHHHHHhhh
Confidence 122222111 00222444444444 5999999999999998654 6677655
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.81 E-value=3.5e-19 Score=172.91 Aligned_cols=253 Identities=25% Similarity=0.389 Sum_probs=211.8
Q ss_pred eeEEEeeCCCCCCCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 021337 32 FSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDS 111 (314)
Q Consensus 32 ~~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 111 (314)
+.||++-..|.|-++--+......+.. ....+|+.+||-+......+....+.+++.+......+-.+.++.+|...++
T Consensus 522 ~t~Gv~~~~gqrnk~c~~~~~v~nf~~-~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~r 600 (1081)
T KOG0618|consen 522 WTYGVAGVSGQRNKVCSRAVWVENFFL-NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNR 600 (1081)
T ss_pred eeeccchhcccccchhhhhhhhhhccc-CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhh
Confidence 569999999997777655554433333 3457999999999999999999999999998776666666669999999999
Q ss_pred HHHHhccccccccCCeEEEEEEeC--------CeEEEEEeccceEEEEeCCeeEEcCCCCCCC-ChhHHHHHHHhCCeEE
Q 021337 112 EFLKSENNQNRDAGSTASTAILVG--------DRLLVANVGDSRAVICRGGNAIAVSRDHKPD-QTDERQRIEDAGGFVM 182 (314)
Q Consensus 112 ~~~~~~~~~~~~~gtT~~~~~i~~--------~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~-~~~~~~~i~~~g~~~~ 182 (314)
.+..... ..|..++.+.|.. .+++.||+|+|.+.+.++|+-.++|+-..+. .++|.+|+..+.|++.
T Consensus 601 klg~~g~----~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ 676 (1081)
T KOG0618|consen 601 KLGEEGQ----VLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFIT 676 (1081)
T ss_pred hhhhhhc----cccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeec
Confidence 9854432 2455666666663 3789999999999999999988888877554 7889999999999997
Q ss_pred eCCcceeCCccccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcCCCCHHHHHHHHHHH
Q 021337 183 WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQE 262 (314)
Q Consensus 183 ~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~~~~~~~~a~~l~~~ 262 (314)
. .+...++-..||++|.....+.+.+.|.+....+++.+++||+++.++|++++-++..+.+++..+|-.+|+.|.+.
T Consensus 677 e--d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d~ 754 (1081)
T KOG0618|consen 677 E--DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCDL 754 (1081)
T ss_pred C--CCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHHH
Confidence 4 55677778899999999999999999999999999988999999999999999999999999888999999999999
Q ss_pred HHHcCCCCceEEEEEEcCCCchhhhcccc
Q 021337 263 AYQRGSADNITCVVVRFLANQELIWHGLQ 291 (314)
Q Consensus 263 a~~~~~~DNiT~ivv~~~~~~~~~~~~~~ 291 (314)
|..+|+.||++++||++....+.-.+-..
T Consensus 755 AqSYgc~~nv~vlVv~l~~~~~~~~e~t~ 783 (1081)
T KOG0618|consen 755 AQSYGCAENVSVLVVRLNHLEECVDEFTL 783 (1081)
T ss_pred HHhcccccCeeEEEEEeecchhhcccccc
Confidence 99999999999999999887664444333
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.78 E-value=3.3e-17 Score=138.45 Aligned_cols=184 Identities=19% Similarity=0.187 Sum_probs=132.8
Q ss_pred eeEEEeeCCCCCCCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHH
Q 021337 32 FSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDS 111 (314)
Q Consensus 32 ~~~~~~s~~G~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~ 111 (314)
+.++....++ ....-|++.+.... +...+++|+||+|+...+.+++..+...|.+....... +...+..+++
T Consensus 4 ~~~~~~~~p~-~~~~GD~~~~~~~~---~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~----~~~~l~~~n~ 75 (193)
T smart00331 4 GLIAQYYEDA-TQVGGDFYDVVKLP---EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGIS----LSQILERLNR 75 (193)
T ss_pred eEEEEEEcch-HhcCccEEEEEEeC---CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCC----HHHHHHHHHH
Confidence 3455555555 47788998876442 23579999999999988889999998888775443223 3344455566
Q ss_pred HHHHhccccccccCCeEEEEEE--eCCeEEEEEeccceEEEEe-CCeeEEcCCCCCCCChhHHHHHHHhCCeEEeCCcce
Q 021337 112 EFLKSENNQNRDAGSTASTAIL--VGDRLLVANVGDSRAVICR-GGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWR 188 (314)
Q Consensus 112 ~~~~~~~~~~~~~gtT~~~~~i--~~~~l~~a~vGDsr~yl~r-~~~~~~lt~dh~~~~~~~~~~i~~~g~~~~~~~~~~ 188 (314)
.+... ....+++|++++++ ..++++++|+||+++|+++ ++...+.+.+.
T Consensus 76 ~l~~~---~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------------------------- 127 (193)
T smart00331 76 AIYEN---GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------------------------- 127 (193)
T ss_pred HHHhc---CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC-------------------------
Confidence 66544 22347999999998 4789999999999999999 56555555442
Q ss_pred eCCccccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHhHcCC--CCHHHHHHHHHHHHH
Q 021337 189 VGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEEAVAMIKPI--QDPEEAAKRLMQEAY 264 (314)
Q Consensus 189 ~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~i~~~l~~~--~~~~~~a~~l~~~a~ 264 (314)
+..+|.... .+++.....+.++ |+|+|+|||+++.+.++++.+++.+. .+++++++.+++.+.
T Consensus 128 -------~~~lG~~~~-----~~~~~~~~~l~~g-d~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 128 -------GAPLGLEPD-----VEVDVRELTLEPG-DLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred -------CceeeeCCC-----CcceeEEEeeCCC-CEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 223453221 3355666667775 99999999999999999999999875 368998988887654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.70 E-value=1.2e-15 Score=152.65 Aligned_cols=199 Identities=20% Similarity=0.204 Sum_probs=140.6
Q ss_pred eeEEEeeCCC-CCCCCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHH
Q 021337 32 FSYGYASSPG-KRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTD 110 (314)
Q Consensus 32 ~~~~~~s~~G-~r~~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 110 (314)
+.+|.+...- .+..+.|++.+.... +...+++|+||+|+...|..++..+.+.+.+......++ ..++..+|
T Consensus 552 ~~~g~a~~~k~g~~vsGD~y~~~~l~---~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~----~~ai~~lN 624 (764)
T TIGR02865 552 VSTGVARAAKDGELVSGDSYSFGKLS---AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDR----EVAIKTVN 624 (764)
T ss_pred ehhhHHHhcCCCCcccCceEEEEEEC---CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCH----HHHHHHHH
Confidence 4444444333 378999999876432 234688999999987777788888777776543222223 44555666
Q ss_pred HHHHHhccccccccCCeEEEEEEe--CCeEEEEEeccceEEEEeCCeeEEcCCCCCCCChhHHHHHHHhCCeEEeCCcce
Q 021337 111 SEFLKSENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWR 188 (314)
Q Consensus 111 ~~~~~~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDsr~yl~r~~~~~~lt~dh~~~~~~~~~~i~~~g~~~~~~~~~~ 188 (314)
..+..... ..+.+|+.+++++ .+++.++++|+++.|++|++.+.+++..+.+
T Consensus 625 ~~L~~~~~---~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP----------------------- 678 (764)
T TIGR02865 625 SILSLRST---DEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP----------------------- 678 (764)
T ss_pred HHHHhCCC---CCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce-----------------------
Confidence 66544322 2367999999996 7899999999999999999988887654321
Q ss_pred eCCccccccccCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcCCCCHHH-----HHHhHcC--CCCHHHHHHHHHH
Q 021337 189 VGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWDVVTNEE-----AVAMIKP--IQDPEEAAKRLMQ 261 (314)
Q Consensus 189 ~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d~l~~~~-----i~~~l~~--~~~~~~~a~~l~~ 261 (314)
+|-.. ..+++.....+.++ |+|+|+|||+++..++.+ +.+++.+ ..+|+++++.|++
T Consensus 679 ----------lGil~-----~~~~~~~~~~L~~G-D~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~ 742 (764)
T TIGR02865 679 ----------IGILD-----EVDVELVRKKLKNG-DLIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLLE 742 (764)
T ss_pred ----------eEecc-----CCccceEEEEeCCC-CEEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 22110 13455566667674 999999999999876533 7777764 3589999999999
Q ss_pred HHHHcC---CCCceEEEEEEc
Q 021337 262 EAYQRG---SADNITCVVVRF 279 (314)
Q Consensus 262 ~a~~~~---~~DNiT~ivv~~ 279 (314)
.+.+.. ..||+|++++++
T Consensus 743 ~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 743 KAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHhcCCCCCCCeEEEEEEe
Confidence 997653 379999999987
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.56 E-value=6.7e-13 Score=111.92 Aligned_cols=174 Identities=19% Similarity=0.176 Sum_probs=113.3
Q ss_pred eEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhccccccccCCeEEEEEEe--CCeE
Q 021337 61 IVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV--GDRL 138 (314)
Q Consensus 61 ~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~i~--~~~l 138 (314)
+..+++|+|++|....|.+.+..+...+......... ....+..+|+.+....... ...+|++++.++ .+++
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l 76 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTL 76 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEE
Confidence 3578899999997666667666666666543222222 3344445555554333222 367888888877 6789
Q ss_pred EEEEeccceEEEEeC--CeeEEcCCCCCCCChhHHHHHHHhCCeEEeCCcceeCCccccccccCCCCCccceecCCceEE
Q 021337 139 LVANVGDSRAVICRG--GNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQE 216 (314)
Q Consensus 139 ~~a~vGDsr~yl~r~--~~~~~lt~dh~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~ 216 (314)
+++++|+++++++++ +....+..... .+|.... .......
T Consensus 77 ~~~~aG~~~~l~~~~~~~~~~~~~~~~~---------------------------------~lG~~~~-----~~~~~~~ 118 (193)
T PF07228_consen 77 TYANAGHPPPLLLRPGGREIEQLESEGP---------------------------------PLGIFED-----IDYQEQE 118 (193)
T ss_dssp EEEEESSSEEEEEETTCTEEEEETCSSB---------------------------------BCSSSCT-----TCEEEEE
T ss_pred EEeCCCCCCEEEEeccccceeecccCcc---------------------------------ceeeecc-----ccccceE
Confidence 999999999999998 33443333222 1442111 2333445
Q ss_pred EEeCCCCeEEEEEcCCCcCCCCHH-------HHHHhHcC--CCCHHHHHHHHHHHHHHc---CCCCceEEEEEEc
Q 021337 217 EVIDSSLEFLILASDGLWDVVTNE-------EAVAMIKP--IQDPEEAAKRLMQEAYQR---GSADNITCVVVRF 279 (314)
Q Consensus 217 ~~~~~~~d~llL~SDGv~d~l~~~-------~i~~~l~~--~~~~~~~a~~l~~~a~~~---~~~DNiT~ivv~~ 279 (314)
+.+.+ +|+|+|+|||+++....+ .+.+++.+ ..+++++++.|++.+... ...||+|++++++
T Consensus 119 ~~l~~-gd~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~ 192 (193)
T PF07228_consen 119 IQLEP-GDRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRR 192 (193)
T ss_dssp EE--T-TEEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE
T ss_pred EEecc-ccEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEE
Confidence 55555 599999999999998533 44667763 367999999999998873 4679999999986
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.61 E-value=7.3e-06 Score=76.24 Aligned_cols=187 Identities=17% Similarity=0.127 Sum_probs=116.3
Q ss_pred CCCceEEeeecCCCCceEEEEEEEcCCChHHHHHHHHHHHHHHHHhCCCC-chhHHHHHHHHHHHHHHHHHHhccccccc
Q 021337 45 SMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF-ISDTKSAIADAYSHTDSEFLKSENNQNRD 123 (314)
Q Consensus 45 ~neD~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 123 (314)
..-|+|-+.... +....++|+|.+|..-.|.+.+......+...... ..++...++ ..++.+...... .
T Consensus 161 vGGD~yd~~~~~---~~~~~i~I~DvsG~Gv~aal~m~~~~~~~~~~~~~~~~~p~~~l~----~~n~~~~~~~~~---~ 230 (367)
T COG2208 161 VGGDYYDFIQLG---EKRLRIGIGDVSGKGVPAALLMLMPKLALRLLLESGPLDPADVLE----TLNRVLKQNLEE---D 230 (367)
T ss_pred cCCceEEEEEEC---CcEEEEEEEeccCCCHHHHHHHHHHHHHHHHhhhcccCCHHHHHH----HHHHHHHhcccC---C
Confidence 677888776442 25678899999994333333333333333222222 223444443 333333332221 1
Q ss_pred cCCeEEEEEEe--CCeEEEEEeccceEEEEeCCee---EEcCCCCCCCChhHHHHHHHhCCeEEeCCcceeCCccccccc
Q 021337 124 AGSTASTAILV--GDRLLVANVGDSRAVICRGGNA---IAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRA 198 (314)
Q Consensus 124 ~gtT~~~~~i~--~~~l~~a~vGDsr~yl~r~~~~---~~lt~dh~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~tr~ 198 (314)
+-+|+..++++ .+.+.++++|---.++++.++. ..+.. ....
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~---------------------------------~g~p 277 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTA---------------------------------LGLP 277 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccC---------------------------------CCce
Confidence 67888888887 7789999999999999886532 22211 2333
Q ss_pred cCCCCCccceecCCceEEEEeCCCCeEEEEEcCCCcC-------CCCHHHHHHhHcC--CCCHHHHHHHHHHHHHHcC--
Q 021337 199 FGDRLLKQYVVADPEIQEEVIDSSLEFLILASDGLWD-------VVTNEEAVAMIKP--IQDPEEAAKRLMQEAYQRG-- 267 (314)
Q Consensus 199 lG~~~~~~~~~~~p~i~~~~~~~~~d~llL~SDGv~d-------~l~~~~i~~~l~~--~~~~~~~a~~l~~~a~~~~-- 267 (314)
+|.... ..+.+....+.+ ||.++|.|||+.+ .+..+...+++.. ..+++++++.+.+...+..
T Consensus 278 iG~~~~-----~~~~~~~~~l~~-gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~ 351 (367)
T COG2208 278 IGLLPD-----YQYEVASLQLEP-GDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEEILEAILESLEELQGD 351 (367)
T ss_pred eeecCC-----ccchheeEEecC-CCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCC
Confidence 452211 334445555666 6999999999999 4556667777663 3589999988888776642
Q ss_pred --CCCceEEEEEEcC
Q 021337 268 --SADNITCVVVRFL 280 (314)
Q Consensus 268 --~~DNiT~ivv~~~ 280 (314)
..||+|++++++.
T Consensus 352 ~~~~DDiTll~lk~~ 366 (367)
T COG2208 352 QIQDDDITLLVLKVK 366 (367)
T ss_pred ccccCceEEEEEEec
Confidence 3588999999975
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=83.45 E-value=15 Score=33.05 Aligned_cols=102 Identities=9% Similarity=0.016 Sum_probs=54.9
Q ss_pred CCCCceEEeeecCCCCceEEEEEEEc--CCChHH-HHHHHHHHHHH-HHHhCC----CCchhHHHHHHHHHHHHHHHHHH
Q 021337 44 SSMEDFYETRIDGVEGEIVGLFGVFD--GHGGAR-AAEYVKHNLFS-NLIRHP----KFISDTKSAIADAYSHTDSEFLK 115 (314)
Q Consensus 44 ~~neD~~~~~~~~~~~~~~~~~~V~D--G~GG~~-~~~~as~~~~~-~l~~~~----~~~~~~~~~l~~~~~~~~~~~~~ 115 (314)
...-|.+.+... .++...|.++| |||++. .+.+....++. .+.... ....++ .+.+..+|+.+..
T Consensus 148 ~~~GD~~d~~~l---~~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p----~~~l~~lN~~l~~ 220 (303)
T PRK10693 148 DKPGLVLDIAAL---SDNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPEL----GALLKQVNHLLRQ 220 (303)
T ss_pred CCCccEEeeeec---CCCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCH----HHHHHHHHHHHHh
Confidence 345677765433 23345677777 555332 22233334333 444321 111123 3444466666655
Q ss_pred hccccccccCCeEEEEEEe--CCeEEEEEeccceEEEEeCCee
Q 021337 116 SENNQNRDAGSTASTAILV--GDRLLVANVGDSRAVICRGGNA 156 (314)
Q Consensus 116 ~~~~~~~~~gtT~~~~~i~--~~~l~~a~vGDsr~yl~r~~~~ 156 (314)
..... ..|+..++++ .+.+.+++.|-...++..++.+
T Consensus 221 ~~~~~----~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 221 ANLPG----QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred cCCCc----eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 43221 2578878887 5689999999999885444433
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=43.31 E-value=15 Score=25.44 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=15.0
Q ss_pred CCCCeEEEEEcCCCcCCCC
Q 021337 220 DSSLEFLILASDGLWDVVT 238 (314)
Q Consensus 220 ~~~~d~llL~SDGv~d~l~ 238 (314)
...|..+++++||+|=.+.
T Consensus 24 ~~~G~Rllva~nGv~lEv~ 42 (72)
T PF09436_consen 24 ERPGHRLLVASNGVFLEVR 42 (72)
T ss_pred ccCCcEEEEecCcEEEEEe
Confidence 3457999999999996544
No 22
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=37.85 E-value=17 Score=26.65 Aligned_cols=48 Identities=19% Similarity=0.360 Sum_probs=32.4
Q ss_pred CeEEEEEcCCCcCCCCHHHHHHhHcCCCCHHHHHHHHHHHHHHcCCCCceE
Q 021337 223 LEFLILASDGLWDVVTNEEAVAMIKPIQDPEEAAKRLMQEAYQRGSADNIT 273 (314)
Q Consensus 223 ~d~llL~SDGv~d~l~~~~i~~~l~~~~~~~~~a~~l~~~a~~~~~~DNiT 273 (314)
+|-++|+.|||+-.+...+..+-++.. | ..+-.|-+...++|-.+.++
T Consensus 25 ~D~vlL~qdGV~aAl~~~~~~~sl~~~--p-~~~~alkeDl~ARGl~~~~s 72 (96)
T COG2168 25 GDAVLLLQDGVYAALKGNRYLASLRES--P-IKVYALKEDLLARGLTGQIS 72 (96)
T ss_pred cCeEEEEcccchhhhcCcHHHHHHhcC--c-cceeeehhhHHhccchhhcC
Confidence 589999999999999988877777662 2 22333445556666544443
No 23
>COG3315 O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=37.61 E-value=51 Score=29.72 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=52.6
Q ss_pred cceEEEEeCCe-eEEcCCCCCCCChhHHHHHHHhCCeEEeCCcceeCCccccccccCCCCCccceecCCceEEEEeCCCC
Q 021337 145 DSRAVICRGGN-AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEVIDSSL 223 (314)
Q Consensus 145 Dsr~yl~r~~~-~~~lt~dh~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~~~~~~ 223 (314)
|+|+|.+.++. +.+.-.||+-..+..+..+.+.++.+... +. .+...+=..... ..+....+...
T Consensus 104 DTRayRl~~~~~~~vfEvD~Pevi~~K~~~l~e~~~~~~~~---~~----~Va~Dl~~~dw~------~~L~~~G~d~~- 169 (297)
T COG3315 104 DTRAYRLDWPKGTRVFEVDLPEVIEFKKKLLAERGATPPAH---RR----LVAVDLREDDWP------QALAAAGFDRS- 169 (297)
T ss_pred ccceeecCCCCCCeEEECCCcHHHHHHHHHhhhcCCCCCce---EE----EEeccccccchH------HHHHhcCCCcC-
Confidence 99999999884 99999999988877777777776543200 00 010000000000 00000111111
Q ss_pred eEEEEEcCCCcCCCCHHHHHHhHcC
Q 021337 224 EFLILASDGLWDVVTNEEAVAMIKP 248 (314)
Q Consensus 224 d~llL~SDGv~d~l~~~~i~~~l~~ 248 (314)
.-.++..-|+.-||+++++.++++.
T Consensus 170 ~pt~~iaEGLl~YL~~~~v~~ll~~ 194 (297)
T COG3315 170 RPTLWIAEGLLMYLPEEAVDRLLSR 194 (297)
T ss_pred CCeEEEeccccccCCHHHHHHHHHH
Confidence 3444555799999999999888754
No 24
>TIGR03735 PRTRC_A PRTRC system protein A. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated protein A.
Probab=32.06 E-value=1.4e+02 Score=25.01 Aligned_cols=60 Identities=18% Similarity=0.294 Sum_probs=38.3
Q ss_pred eCCCCeEEEEEcCCCcCCCCHHHHHHhHc--C-C------------------CCHHHHHHHHHHHHHHcCCCCceEEEEE
Q 021337 219 IDSSLEFLILASDGLWDVVTNEEAVAMIK--P-I------------------QDPEEAAKRLMQEAYQRGSADNITCVVV 277 (314)
Q Consensus 219 ~~~~~d~llL~SDGv~d~l~~~~i~~~l~--~-~------------------~~~~~~a~~l~~~a~~~~~~DNiT~ivv 277 (314)
+...|..+++++||+|-.+...-+.-+.. . . .=+..+.+++++.|.+. .++-+..+++
T Consensus 22 l~~~g~r~~~a~~G~~lev~r~wl~~~~~~~~~~~~~~PYg~~~~~~~~~~g~Ip~~l~~~ii~hAr~~-~P~EacG~Ia 100 (192)
T TIGR03735 22 LEKPGHRFIVAADGVWREVRRPWLHAIQRVAPASPITVPYGAVEETLEFLCGPIPASLLEEFAEAARAA-LPNEVAAWIV 100 (192)
T ss_pred cccCCcEEEEecCcEEEEEecHHHHHHHHhcccccccccceeeeeeEEEecCCCCHHHHHHHHHHHHhc-CCcceEEEEE
Confidence 34447899999999998766554433321 1 1 12566778888888875 4455555555
Q ss_pred Ec
Q 021337 278 RF 279 (314)
Q Consensus 278 ~~ 279 (314)
+-
T Consensus 101 g~ 102 (192)
T TIGR03735 101 WN 102 (192)
T ss_pred Ec
Confidence 54
No 25
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=31.96 E-value=57 Score=27.07 Aligned_cols=45 Identities=22% Similarity=0.459 Sum_probs=31.3
Q ss_pred CeEEEEEcCCCcC-----------CCCHHHHHHhHc----CCCCHHHHHHHHHHHHHHcC
Q 021337 223 LEFLILASDGLWD-----------VVTNEEAVAMIK----PIQDPEEAAKRLMQEAYQRG 267 (314)
Q Consensus 223 ~d~llL~SDGv~d-----------~l~~~~i~~~l~----~~~~~~~~a~~l~~~a~~~~ 267 (314)
+|.+++.|.|||. +|.....=+.+. +..-|.+.|.+|++.-.++|
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 5899999999996 233333333332 23569999999999887775
No 26
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=24.61 E-value=1.3e+02 Score=16.23 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=16.5
Q ss_pred EEEeCCeEEEEEeccceEEEE
Q 021337 131 AILVGDRLLVANVGDSRAVIC 151 (314)
Q Consensus 131 ~~i~~~~l~~a~vGDsr~yl~ 151 (314)
++-.++.+|++-.|..|+..+
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 334788999999999988754
No 27
>TIGR02654 circ_KaiB circadian clock protein KaiB. Members of this protein family are the circadian clock protein KaiB of Cyanobacteria, encoded in the circadian clock gene cluster kaiABC. KaiB has homologs of unknown function in some Archaea and Proteobacteria, and has paralogs of unknown function in some Cyanobacteria. KaiB forms homodimers, homotetramers, and multimeric complexes with KaiA and/or KaiC.
Probab=23.31 E-value=2.1e+02 Score=20.68 Aligned_cols=63 Identities=17% Similarity=0.086 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHHHcCCCCceEEEEEEcCCCchhhhccccccccccccCCchhhhhcccCCCC
Q 021337 251 DPEEAAKRLMQEAYQRGSADNITCVVVRFLANQELIWHGLQTTQINMCCVPTQKERERKGEHSD 314 (314)
Q Consensus 251 ~~~~~a~~l~~~a~~~~~~DNiT~ivv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (314)
....+.+.|.+.+-+. ..+.+++=|+.+.+.|+.+-...--.-++.+..-|.+.|+.=|.-||
T Consensus 16 ~S~~ai~nl~~i~e~~-l~g~y~LeVIDv~~qP~lAE~~~IvATPtLIK~~P~P~rriiGdls~ 78 (87)
T TIGR02654 16 NSVRALKTLKNILETE-FQGVYALKVIDVLKNPQLAEEDKILATPTLSKILPPPVRKIIGDLSD 78 (87)
T ss_pred hHHHHHHHHHHHHHHh-cCCceEEEEEEcccCHhHHhHCCEEEecHHhhcCCCCcceeeccccc
Confidence 4455566666666554 34459999999999887655544444566666666666666555443
No 28
>PRK09301 circadian clock protein KaiB; Provisional
Probab=21.39 E-value=2.3e+02 Score=21.16 Aligned_cols=63 Identities=17% Similarity=0.087 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHHcCCCCceEEEEEEcCCCchhhhccccccccccccCCchhhhhcccCCCC
Q 021337 251 DPEEAAKRLMQEAYQRGSADNITCVVVRFLANQELIWHGLQTTQINMCCVPTQKERERKGEHSD 314 (314)
Q Consensus 251 ~~~~~a~~l~~~a~~~~~~DNiT~ivv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (314)
....+.+.|.+.+-.. ..+.+++=||.+.+.|+.+-...--.-++.+..-|.+.|+.=|.=||
T Consensus 19 ~S~~ai~nL~~icE~~-l~g~y~LeVIDv~~qPelAE~~~IvATPTLIK~~P~P~rriiGDlsd 81 (103)
T PRK09301 19 NSVRALKTLKNILETE-FKGVYALKVIDVLKNPQLAEEDKILATPTLAKILPPPVRKIIGDLSD 81 (103)
T ss_pred hHHHHHHHHHHHHHHh-cCCceEEEEEEcccCHhHHhHCCeEEecHHhhcCCCCcceeeccccc
Confidence 3455566666666554 33559999999999887655544444566666666666666555443
Done!