Query 021342
Match_columns 314
No_of_seqs 226 out of 1644
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 09:28:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021342.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021342hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3097 Predicted membrane pro 100.0 3E-29 6.5E-34 221.5 19.6 289 6-302 4-328 (390)
2 KOG3098 Uncharacterized conser 99.9 1.6E-25 3.5E-30 210.8 21.9 261 24-300 5-295 (461)
3 PF05978 UNC-93: Ion channel r 99.9 1.5E-23 3.2E-28 171.3 14.8 142 33-184 1-152 (156)
4 PRK10213 nepI ribonucleoside t 99.8 9.3E-18 2E-22 158.4 25.8 227 52-310 48-277 (394)
5 PRK15403 multidrug efflux syst 99.8 1.3E-17 2.7E-22 158.5 26.5 234 50-309 42-278 (413)
6 TIGR02332 HpaX 4-hydroxyphenyl 99.8 8.7E-18 1.9E-22 159.5 24.9 272 26-309 6-303 (412)
7 PRK03545 putative arabinose tr 99.8 1.5E-17 3.2E-22 156.4 24.8 228 51-311 36-267 (390)
8 KOG2533 Permease of the major 99.8 1.5E-18 3.3E-23 166.7 16.7 272 25-307 39-335 (495)
9 PRK11663 regulatory protein Uh 99.8 2.4E-17 5.2E-22 157.4 21.6 233 52-302 51-297 (434)
10 TIGR00710 efflux_Bcr_CflA drug 99.8 1.6E-16 3.5E-21 148.0 25.7 234 50-310 31-267 (385)
11 PRK09705 cynX putative cyanate 99.8 4.3E-17 9.2E-22 153.7 20.8 232 49-311 34-266 (393)
12 TIGR00903 2A0129 major facilit 99.8 1.9E-16 4E-21 148.2 24.6 232 49-307 16-249 (368)
13 PRK15402 multidrug efflux syst 99.8 3.3E-16 7E-21 148.0 25.9 235 51-311 40-277 (406)
14 PRK11551 putative 3-hydroxyphe 99.8 1.9E-16 4.1E-21 149.3 24.2 226 63-311 54-281 (406)
15 COG2814 AraJ Arabinose efflux 99.8 1.6E-16 3.4E-21 147.3 22.8 254 25-310 10-272 (394)
16 PRK12307 putative sialic acid 99.8 1.6E-16 3.5E-21 150.8 23.4 243 51-310 45-291 (426)
17 PRK10091 MFS transport protein 99.8 2.4E-16 5.2E-21 147.9 23.6 251 28-310 3-260 (382)
18 TIGR00890 2A0111 Oxalate/Forma 99.8 1.9E-16 4.2E-21 146.4 22.5 234 51-310 30-265 (377)
19 PRK14995 methyl viologen resis 99.7 3.2E-16 6.9E-21 152.2 23.9 154 49-217 31-186 (495)
20 TIGR00893 2A0114 d-galactonate 99.7 8.3E-17 1.8E-21 149.2 18.8 244 50-310 20-276 (399)
21 PRK10133 L-fucose transporter; 99.7 9.5E-16 2E-20 146.7 25.8 280 11-310 9-320 (438)
22 KOG1330 Sugar transporter/spin 99.7 1E-17 2.2E-22 155.5 11.7 200 5-219 9-215 (493)
23 PRK11102 bicyclomycin/multidru 99.7 4.8E-16 1E-20 144.9 22.9 235 51-310 18-255 (377)
24 PLN00028 nitrate transmembrane 99.7 8.1E-16 1.8E-20 148.7 25.2 229 65-309 77-312 (476)
25 TIGR00891 2A0112 putative sial 99.7 7.4E-16 1.6E-20 144.3 24.0 177 27-217 11-192 (405)
26 PRK03633 putative MFS family t 99.7 5.5E-16 1.2E-20 145.4 22.1 254 25-311 3-261 (381)
27 PF07690 MFS_1: Major Facilita 99.7 2.3E-16 4.9E-21 144.9 18.6 239 52-310 25-268 (352)
28 TIGR00900 2A0121 H+ Antiporter 99.7 2.2E-15 4.8E-20 138.8 24.5 227 64-311 39-273 (365)
29 TIGR00886 2A0108 nitrite extru 99.7 1.4E-15 3E-20 141.0 23.3 261 30-302 3-279 (366)
30 TIGR00881 2A0104 phosphoglycer 99.7 3.9E-16 8.5E-21 144.4 18.5 244 50-310 21-277 (379)
31 PRK09874 drug efflux system pr 99.7 2.8E-15 6.1E-20 141.1 24.6 181 16-216 5-196 (408)
32 PRK10406 alpha-ketoglutarate t 99.7 3.1E-15 6.7E-20 142.8 24.9 223 65-311 69-305 (432)
33 PRK10473 multidrug efflux syst 99.7 4.1E-15 9E-20 139.7 25.4 233 51-311 30-265 (392)
34 PRK09556 uhpT sugar phosphate 99.7 3.9E-16 8.5E-21 150.4 18.4 232 63-310 68-319 (467)
35 TIGR00897 2A0118 polyol permea 99.7 4E-15 8.6E-20 140.6 24.7 262 25-310 10-282 (402)
36 TIGR00894 2A0114euk Na(+)-depe 99.7 8.1E-16 1.8E-20 148.0 20.0 220 65-302 82-315 (465)
37 TIGR00895 2A0115 benzoate tran 99.7 2.4E-15 5.1E-20 140.3 22.6 139 64-217 57-196 (398)
38 TIGR00711 efflux_EmrB drug res 99.7 4.2E-15 9.1E-20 143.2 24.6 151 51-217 29-181 (485)
39 PRK11652 emrD multidrug resist 99.7 9.2E-15 2E-19 137.5 25.7 232 50-310 34-268 (394)
40 PRK10642 proline/glycine betai 99.7 4.2E-15 9.1E-20 144.2 23.0 142 65-217 63-216 (490)
41 PRK03699 putative transporter; 99.7 1.1E-14 2.4E-19 137.1 24.7 257 25-310 4-266 (394)
42 PRK11195 lysophospholipid tran 99.7 1.1E-14 2.3E-19 137.5 24.5 222 63-311 42-267 (393)
43 TIGR00879 SP MFS transporter, 99.7 1.9E-15 4E-20 144.0 18.7 140 62-217 74-220 (481)
44 PRK11273 glpT sn-glycerol-3-ph 99.7 8.9E-15 1.9E-19 140.4 22.8 229 63-310 67-314 (452)
45 TIGR00892 2A0113 monocarboxyla 99.7 1.1E-14 2.4E-19 140.0 23.4 235 51-302 46-294 (455)
46 PRK11010 ampG muropeptide tran 99.7 3E-14 6.5E-19 138.3 25.3 268 19-310 4-284 (491)
47 PRK11043 putative transporter; 99.7 4.5E-14 9.7E-19 133.1 25.7 222 51-301 33-255 (401)
48 TIGR00805 oat sodium-independe 99.7 5.6E-15 1.2E-19 147.3 20.1 236 65-310 74-392 (633)
49 PRK11646 multidrug resistance 99.7 4.6E-14 1E-18 133.5 25.2 214 65-309 52-267 (400)
50 PRK10054 putative transporter; 99.7 1.7E-14 3.6E-19 136.2 21.9 256 25-310 4-269 (395)
51 TIGR00806 rfc RFC reduced fola 99.7 5.4E-14 1.2E-18 133.0 24.5 151 51-218 53-207 (511)
52 PRK10077 xylE D-xylose transpo 99.6 3.6E-14 7.7E-19 136.7 23.4 144 63-217 59-218 (479)
53 PRK12382 putative transporter; 99.6 5.8E-14 1.3E-18 131.9 24.3 153 22-184 9-175 (392)
54 TIGR00712 glpT glycerol-3-phos 99.6 3.4E-14 7.4E-19 135.8 22.2 236 55-308 57-310 (438)
55 PRK10489 enterobactin exporter 99.6 2.2E-14 4.8E-19 136.0 20.5 220 65-310 58-284 (417)
56 PRK10504 putative transporter; 99.6 8.9E-14 1.9E-18 133.9 24.0 173 27-215 9-187 (471)
57 PRK08633 2-acyl-glycerophospho 99.6 7.2E-14 1.6E-18 148.2 25.0 235 63-311 51-295 (1146)
58 PRK09952 shikimate transporter 99.6 1.7E-13 3.6E-18 131.2 25.2 121 66-196 71-203 (438)
59 PRK15034 nitrate/nitrite trans 99.6 2E-13 4.3E-18 130.5 25.1 151 16-177 17-183 (462)
60 PRK03893 putative sialic acid 99.6 1.5E-13 3.3E-18 133.0 23.8 156 26-196 18-178 (496)
61 TIGR00896 CynX cyanate transpo 99.6 8.9E-14 1.9E-18 129.0 21.0 231 51-310 27-257 (355)
62 PRK05122 major facilitator sup 99.6 1.8E-13 3.9E-18 128.8 23.2 150 25-184 12-175 (399)
63 PRK15075 citrate-proton sympor 99.6 3.1E-13 6.8E-18 129.0 24.8 117 70-196 67-195 (434)
64 PRK06814 acylglycerophosphoeth 99.6 2E-13 4.3E-18 145.0 25.3 226 62-310 55-286 (1140)
65 TIGR00883 2A0106 metabolite-pr 99.6 1.2E-13 2.7E-18 128.3 18.9 222 68-310 44-280 (394)
66 TIGR00902 2A0127 phenyl propri 99.6 4.9E-13 1.1E-17 125.6 23.0 254 28-311 4-266 (382)
67 TIGR00898 2A0119 cation transp 99.6 2.5E-13 5.5E-18 131.9 19.8 137 62-217 130-267 (505)
68 TIGR00885 fucP L-fucose:H+ sym 99.6 2.8E-12 6.1E-17 121.8 25.5 122 51-182 30-155 (410)
69 cd06174 MFS The Major Facilita 99.5 1.1E-12 2.3E-17 119.9 21.4 138 60-213 35-173 (352)
70 COG2271 UhpC Sugar phosphate p 99.5 4.1E-13 8.9E-18 124.0 18.3 269 22-309 22-312 (448)
71 KOG3764 Vesicular amine transp 99.5 3.3E-14 7.1E-19 130.0 10.6 186 58-270 101-291 (464)
72 TIGR00887 2A0109 phosphate:H+ 99.5 1.6E-12 3.4E-17 126.6 23.2 144 64-218 61-229 (502)
73 TIGR00882 2A0105 oligosacchari 99.5 2.1E-12 4.7E-17 121.6 23.2 225 63-311 42-280 (396)
74 KOG2532 Permease of the major 99.5 4.5E-13 9.8E-18 128.5 17.7 217 65-299 79-309 (466)
75 TIGR00901 2A0125 AmpG-related 99.5 3E-12 6.6E-17 118.6 22.7 221 70-310 33-270 (356)
76 PRK11128 putative 3-phenylprop 99.5 2.7E-12 5.8E-17 120.5 21.6 219 64-311 44-266 (382)
77 TIGR00899 2A0120 sugar efflux 99.5 7.4E-12 1.6E-16 116.3 24.4 216 65-310 39-260 (375)
78 KOG2615 Permease of the major 99.5 1.1E-13 2.4E-18 125.8 11.5 106 66-182 75-181 (451)
79 TIGR01299 synapt_SV2 synaptic 99.5 3.5E-13 7.5E-18 135.7 15.7 144 63-217 206-358 (742)
80 KOG0255 Synaptic vesicle trans 99.5 1.1E-13 2.3E-18 135.3 11.4 144 55-217 114-258 (521)
81 PRK09528 lacY galactoside perm 99.5 4.2E-12 9E-17 120.6 21.8 266 27-311 9-288 (420)
82 PRK11902 ampG muropeptide tran 99.5 5.1E-11 1.1E-15 112.5 25.3 215 73-310 46-271 (402)
83 PRK10207 dipeptide/tripeptide 99.4 2.2E-11 4.7E-16 118.2 18.8 182 19-214 5-194 (489)
84 TIGR00889 2A0110 nucleoside tr 99.4 1.6E-10 3.4E-15 110.1 22.5 223 65-311 44-277 (418)
85 PTZ00207 hypothetical protein; 99.4 9.4E-11 2E-15 115.2 20.5 131 70-218 72-210 (591)
86 TIGR00924 yjdL_sub1_fam amino 99.3 3.6E-10 7.9E-15 109.4 24.0 140 63-215 52-193 (475)
87 KOG0254 Predicted transporter 99.3 3.2E-11 6.9E-16 117.8 16.3 141 63-218 93-234 (513)
88 KOG0569 Permease of the major 99.3 2.1E-10 4.5E-15 109.8 20.5 140 64-218 65-209 (485)
89 PF06609 TRI12: Fungal trichot 99.3 4.4E-10 9.6E-15 110.1 22.8 149 50-216 70-220 (599)
90 PF05977 MFS_3: Transmembrane 99.3 4.2E-10 9.2E-15 109.7 22.7 221 65-310 51-279 (524)
91 TIGR01299 synapt_SV2 synaptic 99.3 1.6E-10 3.4E-15 116.7 16.8 136 66-218 602-738 (742)
92 TIGR00880 2_A_01_02 Multidrug 99.2 2.9E-10 6.3E-15 89.7 13.8 131 69-215 8-140 (141)
93 COG0738 FucP Fucose permease [ 99.2 1.6E-09 3.5E-14 99.9 20.0 207 49-276 38-263 (422)
94 PRK15011 sugar efflux transpor 99.2 6.1E-09 1.3E-13 98.2 24.8 132 69-217 62-198 (393)
95 TIGR00792 gph sugar (Glycoside 99.2 1.8E-09 3.9E-14 102.7 21.0 229 63-311 39-283 (437)
96 PRK09584 tppB putative tripept 99.2 9E-09 2E-13 100.3 24.7 123 71-207 69-194 (500)
97 KOG2504 Monocarboxylate transp 99.2 2.9E-09 6.3E-14 103.5 20.9 233 51-302 73-351 (509)
98 TIGR00788 fbt folate/biopterin 99.2 7.3E-09 1.6E-13 100.1 23.6 229 65-310 67-313 (468)
99 TIGR00889 2A0110 nucleoside tr 99.2 1.3E-09 2.8E-14 103.8 18.0 144 65-219 257-408 (418)
100 TIGR02718 sider_RhtX_FptX side 99.2 1.6E-08 3.4E-13 95.1 24.7 143 152-311 128-270 (390)
101 COG2223 NarK Nitrate/nitrite t 99.2 3.2E-09 6.9E-14 98.4 18.5 227 22-276 8-245 (417)
102 COG2807 CynX Cyanate permease 99.1 1.2E-08 2.6E-13 93.0 19.7 228 46-302 30-261 (395)
103 PRK05122 major facilitator sup 99.1 3.8E-09 8.3E-14 99.4 17.0 136 65-216 255-391 (399)
104 PRK15011 sugar efflux transpor 99.1 1.1E-08 2.3E-13 96.5 20.0 134 66-216 259-393 (393)
105 PRK11551 putative 3-hydroxyphe 99.1 5.6E-09 1.2E-13 98.4 16.4 135 64-213 260-395 (406)
106 PRK10642 proline/glycine betai 99.1 1.4E-08 3E-13 98.6 19.0 139 65-218 292-434 (490)
107 TIGR00899 2A0120 sugar efflux 99.0 2.9E-08 6.3E-13 92.1 19.4 130 69-215 245-375 (375)
108 PRK12382 putative transporter; 99.0 1.5E-08 3.2E-13 95.2 17.0 132 65-212 255-387 (392)
109 cd06174 MFS The Major Facilita 99.0 1.8E-08 3.9E-13 91.9 16.7 131 65-211 217-349 (352)
110 TIGR00902 2A0127 phenyl propri 99.0 4.1E-08 8.8E-13 92.2 19.2 128 66-211 247-376 (382)
111 PF11700 ATG22: Vacuole efflux 99.0 2.7E-08 5.9E-13 96.1 18.1 179 25-218 278-472 (477)
112 PF00083 Sugar_tr: Sugar (and 99.0 4.3E-12 9.3E-17 121.4 -8.3 142 63-217 50-195 (451)
113 TIGR00890 2A0111 Oxalate/Forma 99.0 2.3E-08 5E-13 92.3 16.0 110 65-184 246-358 (377)
114 PRK03699 putative transporter; 99.0 4.1E-08 8.9E-13 92.5 17.8 140 64-220 246-386 (394)
115 PRK09669 putative symporter Ya 99.0 9E-08 1.9E-12 91.7 20.3 109 64-181 50-170 (444)
116 TIGR01301 GPH_sucrose GPH fami 98.9 1.2E-07 2.5E-12 91.5 20.4 106 65-180 45-175 (477)
117 PRK09874 drug efflux system pr 98.9 2.8E-08 6.1E-13 93.5 15.4 127 70-212 269-396 (408)
118 PRK10489 enterobactin exporter 98.9 6.5E-08 1.4E-12 91.8 17.3 138 66-218 266-404 (417)
119 PF01306 LacY_symp: LacY proto 98.9 3.2E-07 6.8E-12 86.4 21.0 266 25-310 4-284 (412)
120 PRK09705 cynX putative cyanate 98.9 2E-07 4.3E-12 87.9 19.5 138 65-218 246-386 (393)
121 PRK15462 dipeptide/tripeptide 98.9 1.2E-07 2.6E-12 91.8 17.5 136 63-212 49-187 (493)
122 PRK09528 lacY galactoside perm 98.9 9.2E-08 2E-12 90.9 16.5 135 65-215 268-405 (420)
123 PRK10429 melibiose:sodium symp 98.8 7.6E-07 1.6E-11 86.2 22.3 228 65-310 48-291 (473)
124 KOG0252 Inorganic phosphate tr 98.8 9E-09 2E-13 96.3 7.8 147 25-181 35-204 (538)
125 TIGR00898 2A0119 cation transp 98.8 1.3E-07 2.8E-12 92.0 16.1 133 69-219 365-500 (505)
126 PF03825 Nuc_H_symport: Nucleo 98.8 1.2E-06 2.5E-11 83.1 22.1 225 65-313 43-271 (400)
127 KOG2325 Predicted transporter/ 98.8 3.4E-07 7.5E-12 87.4 17.8 106 65-181 77-189 (488)
128 KOG4686 Predicted sugar transp 98.8 1.1E-07 2.4E-12 84.1 12.9 175 29-215 265-444 (459)
129 PRK11128 putative 3-phenylprop 98.8 6.4E-07 1.4E-11 84.0 18.8 108 66-184 247-356 (382)
130 PRK09556 uhpT sugar phosphate 98.8 2.7E-07 5.8E-12 89.1 16.2 140 63-213 298-448 (467)
131 PF13347 MFS_2: MFS/sugar tran 98.8 9.4E-08 2E-12 91.1 12.9 228 65-313 43-288 (428)
132 KOG2816 Predicted transporter 98.8 1.5E-06 3.2E-11 83.6 20.9 218 73-311 76-304 (463)
133 PRK03545 putative arabinose tr 98.8 1E-06 2.3E-11 82.7 19.5 131 65-212 247-378 (390)
134 TIGR00879 SP MFS transporter, 98.8 2.5E-07 5.4E-12 88.0 15.4 139 62-217 322-474 (481)
135 PRK03633 putative MFS family t 98.7 6.5E-07 1.4E-11 83.9 17.6 108 65-184 241-348 (381)
136 COG2270 Permeases of the major 98.7 2.1E-07 4.5E-12 86.6 13.6 177 25-216 249-431 (438)
137 KOG2563 Permease of the major 98.7 5.9E-06 1.3E-10 77.6 22.4 229 65-310 84-330 (480)
138 TIGR00893 2A0114 d-galactonate 98.7 1.1E-06 2.5E-11 81.1 17.8 129 65-209 257-394 (399)
139 TIGR00897 2A0118 polyol permea 98.7 1.7E-06 3.7E-11 81.8 18.6 132 65-214 263-401 (402)
140 PRK10504 putative transporter; 98.7 9.4E-07 2E-11 85.1 17.2 103 71-183 309-415 (471)
141 PF05631 DUF791: Protein of un 98.7 7.4E-06 1.6E-10 75.2 21.3 211 71-302 81-296 (354)
142 TIGR00883 2A0106 metabolite-pr 98.7 2.9E-07 6.4E-12 85.4 12.6 110 65-184 261-376 (394)
143 PRK09952 shikimate transporter 98.6 2.8E-06 6.1E-11 81.4 18.8 133 70-216 297-435 (438)
144 PF13347 MFS_2: MFS/sugar tran 98.6 1.6E-06 3.5E-11 82.7 16.9 154 27-184 224-385 (428)
145 PF03825 Nuc_H_symport: Nucleo 98.6 2.7E-06 5.8E-11 80.6 18.1 129 77-216 261-398 (400)
146 TIGR00895 2A0115 benzoate tran 98.6 4.9E-07 1.1E-11 84.1 12.9 108 63-180 289-397 (398)
147 TIGR00892 2A0113 monocarboxyla 98.6 4E-07 8.6E-12 87.7 12.0 110 65-184 282-396 (455)
148 TIGR01272 gluP glucose/galacto 98.6 1.8E-06 3.9E-11 79.0 15.6 174 109-302 8-196 (310)
149 PRK10077 xylE D-xylose transpo 98.6 2.5E-06 5.4E-11 82.2 17.3 147 61-218 308-462 (479)
150 PRK03893 putative sialic acid 98.6 1.4E-06 3E-11 84.4 15.4 110 65-184 317-429 (496)
151 PRK11462 putative transporter; 98.6 2.2E-05 4.7E-10 75.8 23.6 109 65-182 51-171 (460)
152 TIGR00792 gph sugar (Glycoside 98.6 1.8E-06 3.9E-11 82.1 15.9 116 66-184 264-381 (437)
153 TIGR00900 2A0121 H+ Antiporter 98.6 1.8E-06 3.9E-11 79.3 15.0 109 65-183 253-363 (365)
154 PRK11663 regulatory protein Uh 98.5 4E-06 8.6E-11 80.2 16.9 133 63-211 283-421 (434)
155 TIGR00882 2A0105 oligosacchari 98.5 5E-06 1.1E-10 78.3 17.3 128 65-208 260-389 (396)
156 PRK09848 glucuronide transport 98.5 3.4E-06 7.4E-11 80.9 16.1 110 71-183 276-388 (448)
157 KOG0253 Synaptic vesicle trans 98.5 3E-06 6.4E-11 77.8 14.3 137 63-217 117-254 (528)
158 PRK11010 ampG muropeptide tran 98.5 6.7E-06 1.5E-10 80.0 17.9 132 69-216 269-405 (491)
159 TIGR00887 2A0109 phosphate:H+ 98.5 1.7E-06 3.7E-11 84.3 13.2 136 72-218 348-493 (502)
160 KOG3626 Organic anion transpor 98.5 1.8E-06 4E-11 85.9 13.3 154 113-276 239-419 (735)
161 TIGR00891 2A0112 putative sial 98.5 3.4E-06 7.3E-11 78.8 14.0 110 65-184 280-391 (405)
162 PF05977 MFS_3: Transmembrane 98.5 8.6E-06 1.9E-10 79.7 17.1 116 59-184 250-370 (524)
163 PRK15402 multidrug efflux syst 98.5 1.6E-05 3.6E-10 74.9 18.6 105 68-183 260-370 (406)
164 PRK11273 glpT sn-glycerol-3-ph 98.5 8.3E-06 1.8E-10 78.4 16.8 132 66-213 296-434 (452)
165 PRK10054 putative transporter; 98.4 9.1E-06 2E-10 76.8 16.4 120 74-210 259-380 (395)
166 TIGR01272 gluP glucose/galacto 98.4 1.4E-05 3.1E-10 73.0 17.2 114 58-184 177-291 (310)
167 TIGR00711 efflux_EmrB drug res 98.4 5.2E-06 1.1E-10 79.9 14.7 109 65-183 297-410 (485)
168 PRK12307 putative sialic acid 98.4 9.5E-06 2.1E-10 76.9 16.1 109 65-184 272-384 (426)
169 PRK11646 multidrug resistance 98.4 7.4E-06 1.6E-10 77.5 14.8 94 81-184 266-360 (400)
170 TIGR00896 CynX cyanate transpo 98.4 1.4E-05 3E-10 74.0 15.7 112 63-184 236-349 (355)
171 PRK14995 methyl viologen resis 98.4 8.1E-06 1.8E-10 79.4 14.3 107 66-182 302-412 (495)
172 TIGR02718 sider_RhtX_FptX side 98.4 3.3E-05 7.1E-10 72.6 17.7 123 71-208 256-385 (390)
173 PF01306 LacY_symp: LacY proto 98.4 3.4E-05 7.4E-10 72.8 17.5 136 66-217 266-404 (412)
174 PRK08633 2-acyl-glycerophospho 98.3 1.2E-05 2.6E-10 85.8 16.4 108 65-182 275-383 (1146)
175 COG2211 MelB Na+/melibiose sym 98.3 0.00014 2.9E-09 69.7 21.5 228 66-312 55-299 (467)
176 TIGR00901 2A0125 AmpG-related 98.3 2.3E-06 5E-11 79.2 9.5 87 71-167 257-355 (356)
177 PRK09669 putative symporter Ya 98.3 3.3E-05 7.2E-10 74.0 17.7 112 70-184 275-389 (444)
178 PRK09848 glucuronide transport 98.3 0.00017 3.7E-09 69.1 22.6 105 65-178 50-172 (448)
179 PRK15075 citrate-proton sympor 98.3 3E-05 6.4E-10 74.1 17.2 108 67-184 282-395 (434)
180 COG2211 MelB Na+/melibiose sym 98.3 4.9E-05 1.1E-09 72.7 18.1 157 26-185 234-398 (467)
181 TIGR00710 efflux_Bcr_CflA drug 98.3 4.1E-05 8.9E-10 71.1 17.5 102 65-177 248-356 (385)
182 TIGR00712 glpT glycerol-3-phos 98.3 2E-05 4.3E-10 75.4 15.0 136 65-216 293-436 (438)
183 TIGR00788 fbt folate/biopterin 98.3 1.4E-05 2.9E-10 77.5 13.9 136 70-215 299-447 (468)
184 PRK11102 bicyclomycin/multidru 98.3 3E-05 6.6E-10 72.1 15.9 103 65-178 236-344 (377)
185 PRK10406 alpha-ketoglutarate t 98.3 5.4E-05 1.2E-09 72.3 17.8 136 65-216 285-426 (432)
186 PF03092 BT1: BT1 family; Int 98.3 6.7E-05 1.5E-09 71.9 17.8 175 67-256 33-222 (433)
187 PF07690 MFS_1: Major Facilita 98.2 1.5E-05 3.2E-10 72.9 12.2 100 65-174 249-352 (352)
188 PRK11902 ampG muropeptide tran 98.2 5.2E-05 1.1E-09 71.6 16.0 131 70-216 257-392 (402)
189 TIGR00881 2A0104 phosphoglycer 98.2 4.6E-05 9.9E-10 70.2 15.1 112 63-184 256-373 (379)
190 PRK10091 MFS transport protein 98.2 5E-05 1.1E-09 71.2 15.5 108 65-183 241-350 (382)
191 PRK06814 acylglycerophosphoeth 98.2 3.3E-05 7.3E-10 82.6 15.2 109 64-182 266-395 (1140)
192 PRK10429 melibiose:sodium symp 98.2 5.8E-05 1.3E-09 73.0 15.4 111 70-183 277-393 (473)
193 PLN00028 nitrate transmembrane 98.2 5E-05 1.1E-09 73.6 14.9 136 64-217 293-436 (476)
194 TIGR00769 AAA ADP/ATP carrier 98.2 0.0012 2.6E-08 63.7 23.9 285 25-313 4-331 (472)
195 PRK11043 putative transporter; 98.1 0.00011 2.3E-09 69.3 16.3 103 69-182 248-356 (401)
196 PF11700 ATG22: Vacuole efflux 98.1 0.0011 2.3E-08 64.4 23.1 155 64-218 75-252 (477)
197 PRK11195 lysophospholipid tran 98.1 0.00021 4.6E-09 67.4 17.4 106 65-181 247-354 (393)
198 COG3104 PTR2 Dipeptide/tripept 98.1 5E-05 1.1E-09 72.4 12.7 128 74-215 76-207 (498)
199 TIGR00903 2A0129 major facilit 98.1 0.00016 3.5E-09 67.7 15.9 171 27-215 191-366 (368)
200 PF03137 OATP: Organic Anion T 98.1 8.1E-07 1.8E-11 87.2 -0.1 62 111-182 141-202 (539)
201 PRK10473 multidrug efflux syst 98.1 0.0002 4.4E-09 67.1 16.1 105 65-184 245-350 (392)
202 KOG3762 Predicted transporter 98.1 3.5E-05 7.6E-10 73.9 10.7 130 66-211 413-544 (618)
203 KOG0569 Permease of the major 98.0 0.0003 6.6E-09 67.8 16.4 171 32-219 274-460 (485)
204 KOG0253 Synaptic vesicle trans 98.0 8.6E-05 1.9E-09 68.4 11.4 123 70-214 392-519 (528)
205 PRK10213 nepI ribonucleoside t 98.0 0.0012 2.5E-08 62.4 19.2 102 71-184 264-367 (394)
206 TIGR00894 2A0114euk Na(+)-depe 97.9 0.00039 8.4E-09 66.9 16.2 138 64-215 302-451 (465)
207 PF06813 Nodulin-like: Nodulin 97.9 0.00049 1.1E-08 60.8 15.3 125 76-217 53-185 (250)
208 PRK11462 putative transporter; 97.9 0.00028 6.1E-09 68.1 14.8 114 67-183 271-387 (460)
209 TIGR00924 yjdL_sub1_fam amino 97.9 0.00028 6E-09 68.5 14.4 64 109-182 379-442 (475)
210 KOG4686 Predicted sugar transp 97.9 3.7E-06 8E-11 74.6 1.0 131 42-182 58-197 (459)
211 COG2814 AraJ Arabinose efflux 97.9 0.00061 1.3E-08 63.9 15.5 125 70-212 258-384 (394)
212 COG0477 ProP Permeases of the 97.9 0.00025 5.5E-09 62.1 12.6 119 62-193 42-165 (338)
213 PF01770 Folate_carrier: Reduc 97.9 0.005 1.1E-07 58.1 21.2 129 74-217 56-185 (412)
214 KOG0252 Inorganic phosphate tr 97.8 3.6E-05 7.9E-10 72.6 6.2 180 28-218 304-502 (538)
215 PF03209 PUCC: PUCC protein; 97.8 0.0043 9.3E-08 58.2 19.5 102 73-184 28-152 (403)
216 TIGR00885 fucP L-fucose:H+ sym 97.8 0.0013 2.7E-08 62.6 16.3 106 65-183 275-381 (410)
217 TIGR02332 HpaX 4-hydroxyphenyl 97.8 0.00041 8.9E-09 65.9 13.0 110 65-184 285-396 (412)
218 PRK10133 L-fucose transporter; 97.7 0.0015 3.2E-08 62.7 16.3 110 61-183 297-407 (438)
219 KOG2504 Monocarboxylate transp 97.7 0.00026 5.7E-09 69.1 11.1 171 29-214 299-476 (509)
220 PRK11652 emrD multidrug resist 97.7 0.0027 5.8E-08 59.6 17.2 61 110-181 298-358 (394)
221 TIGR01301 GPH_sucrose GPH fami 97.7 0.0028 6.1E-08 61.4 16.7 145 61-217 307-475 (477)
222 COG2271 UhpC Sugar phosphate p 97.6 0.00091 2E-08 62.7 11.9 170 25-210 249-430 (448)
223 COG2807 CynX Cyanate permease 97.6 0.0045 9.8E-08 57.1 15.9 139 41-193 221-365 (395)
224 PRK15034 nitrate/nitrite trans 97.5 0.0087 1.9E-07 57.7 17.9 175 26-209 250-449 (462)
225 PRK09584 tppB putative tripept 97.5 0.0018 3.8E-08 63.3 13.5 89 80-178 341-439 (500)
226 COG2223 NarK Nitrate/nitrite t 97.5 0.0034 7.4E-08 58.8 14.4 166 25-211 215-398 (417)
227 PF03219 TLC: TLC ATP/ADP tran 97.4 0.11 2.3E-06 50.7 24.2 284 25-313 21-347 (491)
228 PRK10207 dipeptide/tripeptide 97.4 0.0075 1.6E-07 58.8 15.5 100 71-180 321-438 (489)
229 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.014 3.1E-07 58.8 17.7 132 72-211 36-179 (654)
230 KOG0255 Synaptic vesicle trans 97.2 0.013 2.8E-07 57.3 15.7 132 71-219 362-498 (521)
231 TIGR00886 2A0108 nitrite extru 97.0 0.0061 1.3E-07 56.2 10.6 90 65-169 267-365 (366)
232 PF00083 Sugar_tr: Sugar (and 97.0 7.1E-06 1.5E-10 78.4 -9.3 136 67-219 294-442 (451)
233 KOG4332 Predicted sugar transp 97.0 0.025 5.5E-07 50.3 13.6 67 74-140 87-154 (454)
234 PF03209 PUCC: PUCC protein; 97.0 0.078 1.7E-06 49.9 17.3 95 78-182 263-362 (403)
235 PF06609 TRI12: Fungal trichot 97.0 0.03 6.5E-07 55.6 15.2 106 67-182 357-466 (599)
236 KOG0254 Predicted transporter 96.5 0.055 1.2E-06 53.0 13.8 43 62-104 332-374 (513)
237 PRK15403 multidrug efflux syst 96.5 0.2 4.4E-06 47.5 16.9 63 110-183 311-373 (413)
238 KOG3764 Vesicular amine transp 96.3 0.017 3.6E-07 54.1 8.0 112 69-184 316-430 (464)
239 KOG2615 Permease of the major 96.2 0.041 8.9E-07 51.3 9.6 107 67-183 305-414 (451)
240 COG2270 Permeases of the major 96.1 0.76 1.6E-05 43.6 17.9 103 65-177 64-171 (438)
241 PF00854 PTR2: POT family; In 95.9 0.041 8.8E-07 51.5 8.9 88 112-212 34-121 (372)
242 COG0738 FucP Fucose permease [ 95.8 0.25 5.4E-06 46.5 13.2 114 58-184 271-385 (422)
243 COG3202 ATP/ADP translocase [E 95.6 2.4 5.2E-05 41.0 22.8 285 25-313 24-350 (509)
244 PF02487 CLN3: CLN3 protein; 95.5 0.41 8.9E-06 45.3 13.5 105 66-180 284-394 (402)
245 KOG2532 Permease of the major 95.1 0.36 7.7E-06 46.8 12.4 137 61-213 297-446 (466)
246 KOG0637 Sucrose transporter an 94.8 1.4 3.1E-05 42.2 14.7 21 158-178 180-200 (498)
247 PTZ00207 hypothetical protein; 94.5 1.2 2.7E-05 44.4 14.4 115 26-140 351-481 (591)
248 PF03092 BT1: BT1 family; Int 94.4 0.63 1.4E-05 44.6 12.1 130 79-218 275-417 (433)
249 KOG2816 Predicted transporter 94.3 0.83 1.8E-05 44.2 12.6 105 66-181 284-390 (463)
250 PF02487 CLN3: CLN3 protein; 94.1 1.3 2.9E-05 41.9 13.2 60 74-137 74-135 (402)
251 PRK15462 dipeptide/tripeptide 93.9 2.2 4.8E-05 41.7 14.7 61 110-180 376-437 (493)
252 KOG3574 Acetyl-CoA transporter 93.5 4 8.7E-05 38.5 14.6 39 56-94 58-103 (510)
253 PF12832 MFS_1_like: MFS_1 lik 93.2 0.86 1.9E-05 32.4 8.1 66 33-98 5-74 (77)
254 KOG2533 Permease of the major 92.0 1.1 2.4E-05 43.8 9.6 38 66-103 316-357 (495)
255 KOG3098 Uncharacterized conser 91.0 7.1 0.00015 37.8 13.7 82 82-174 305-405 (461)
256 KOG1237 H+/oligopeptide sympor 90.3 12 0.00026 37.3 15.1 136 66-211 80-242 (571)
257 PRK03612 spermidine synthase; 90.0 20 0.00043 35.4 16.3 110 62-182 53-170 (521)
258 COG3104 PTR2 Dipeptide/tripept 88.5 8.7 0.00019 37.3 12.1 59 110-178 393-451 (498)
259 KOG0637 Sucrose transporter an 88.1 2.4 5.2E-05 40.7 7.9 82 59-140 332-414 (498)
260 TIGR00939 2a57 Equilibrative N 87.9 8.3 0.00018 37.1 11.8 61 110-180 371-431 (437)
261 PF06779 DUF1228: Protein of u 87.6 4.2 9E-05 29.6 7.3 56 51-106 19-74 (85)
262 KOG2563 Permease of the major 87.3 4 8.7E-05 39.2 8.9 180 25-218 263-454 (480)
263 PF06963 FPN1: Ferroportin1 (F 85.9 16 0.00034 35.1 12.4 144 27-177 257-412 (432)
264 PF13000 Acatn: Acetyl-coenzym 74.5 92 0.002 30.7 16.6 30 234-263 263-292 (544)
265 KOG1237 H+/oligopeptide sympor 72.2 16 0.00034 36.5 7.8 64 110-183 457-520 (571)
266 PF06963 FPN1: Ferroportin1 (F 70.0 1.1E+02 0.0023 29.5 18.7 32 152-183 144-175 (432)
267 KOG3810 Micronutrient transpor 68.3 36 0.00077 32.0 8.5 124 80-218 63-187 (433)
268 KOG3880 Predicted small molecu 63.0 72 0.0016 29.5 9.2 22 252-273 251-272 (409)
269 PF10329 DUF2417: Region of un 61.2 41 0.00089 29.4 7.2 8 8-15 1-8 (232)
270 KOG2325 Predicted transporter/ 59.8 28 0.00061 33.9 6.6 34 151-184 418-451 (488)
271 PF11947 DUF3464: Protein of u 52.2 39 0.00084 27.5 5.2 72 81-165 56-138 (153)
272 PF07672 MFS_Mycoplasma: Mycop 48.9 1.6E+02 0.0035 26.3 9.0 102 67-176 149-261 (267)
273 KOG1479 Nucleoside transporter 46.7 64 0.0014 30.7 6.5 59 109-177 341-399 (406)
274 PF12273 RCR: Chitin synthesis 40.4 16 0.00035 28.7 1.4 21 192-212 1-21 (130)
275 PF07672 MFS_Mycoplasma: Mycop 33.6 44 0.00096 29.8 3.1 12 165-176 14-25 (267)
276 PF12832 MFS_1_like: MFS_1 lik 33.2 1.7E+02 0.0037 20.5 5.8 46 266-312 17-62 (77)
277 PRK14761 ryhB-regulated fur le 32.7 16 0.00036 19.6 0.2 16 2-17 9-24 (28)
278 PF01733 Nucleoside_tran: Nucl 32.3 13 0.00029 33.7 -0.3 60 110-179 247-306 (309)
279 TIGR00805 oat sodium-independe 31.5 1.3E+02 0.0029 30.3 6.7 28 71-98 379-408 (633)
280 TIGR00926 2A1704 Peptide:H+ sy 30.8 2.3E+02 0.0051 28.9 8.2 80 110-206 564-643 (654)
281 PRK10263 DNA translocase FtsK; 29.9 4.3E+02 0.0094 29.4 10.1 19 61-79 68-86 (1355)
282 COG4769 Predicted membrane pro 29.8 1.3E+02 0.0029 24.8 5.0 55 65-124 79-133 (181)
283 CHL00031 psbT photosystem II p 28.7 1.2E+02 0.0026 17.7 3.3 20 201-220 10-30 (33)
284 TIGR01666 YCCS hypothetical me 25.6 4E+02 0.0087 27.5 8.8 24 19-42 49-72 (704)
285 PF05972 APC_15aa: APC 15 resi 23.3 36 0.00078 16.4 0.4 11 17-27 2-12 (16)
286 TIGR00939 2a57 Equilibrative N 22.5 6.9E+02 0.015 23.9 13.0 28 110-137 105-132 (437)
287 PF15366 DUF4597: Domain of un 21.8 67 0.0015 21.1 1.6 15 4-18 5-19 (62)
288 TIGR02185 Trep_Strep conserved 21.4 4.9E+02 0.011 21.8 12.7 67 26-101 2-72 (189)
No 1
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=99.97 E-value=3e-29 Score=221.52 Aligned_cols=289 Identities=37% Similarity=0.526 Sum_probs=226.6
Q ss_pred CCCCCCCcccCCc-cccCcc--ccccchhhhhHHHHHHHHHHHhhHhhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHH
Q 021342 6 SRDEEAPLVADSL-QVLTPK--NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLV 82 (314)
Q Consensus 6 ~~~~~~~l~~~~~-~p~n~~--~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l 82 (314)
-++++++...+.+ +-+|.. ...||+.++++++++.|.+|+..+++|..+|. ++|..+++..|.....++++.|.+
T Consensus 4 ~~~~~~~~~s~~~~~~~~r~~~~~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~--~lg~~sl~~~y~~l~~s~m~~~~~ 81 (390)
T KOG3097|consen 4 VGAYPNYNESEEEERRYRRKRLGILKNVLILSIAFLLTFTAYLGLQNLQTSVNY--DLGTVSLGALYLSLIDSSMFMPLL 81 (390)
T ss_pred cccccCCCCCCcccchhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc--CcccchhhhhhHHHHHHHHHHHHH
Confidence 3566777776544 222322 57899999999999999999999999999985 788999999999999999999999
Q ss_pred HHhhchhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhc-CCCCccchhhHHHH
Q 021342 83 VRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH-KLHEGTVIGSFNGE 161 (314)
Q Consensus 83 ~~~~G~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~rg~~~~~ 161 (314)
++++|.|++|+++...|..|.+.+++|.+++++++....|+|+++.|.+.++|++++.++|+..+ +...+..+.+.+|.
T Consensus 82 Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg~ 161 (390)
T KOG3097|consen 82 IRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFGE 161 (390)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehhH
Confidence 99999999999999999999999999999999999999999999999999999999999998877 44455667899999
Q ss_pred HHHHHhhhhHHHHHHHHHHHc---CC---C-------C--------CC--CCch--------hHHHHHHHHHHHHHHHHH
Q 021342 162 FWGMFASHQFVGNLITLAVLK---DD---K-------G--------GS--TSGT--------TLLFIVFLGVITLGTILM 210 (314)
Q Consensus 162 ~~~~~~~g~~~G~li~~~i~~---~~---~-------~--------~~--~~~~--------~~~~~~~~~~~~~~~~l~ 210 (314)
|+++++.++.+|++++..+.. +. + + ++ .+.+ ..+=.++..+.+++.++.
T Consensus 162 Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~~ 241 (390)
T KOG3097|consen 162 FFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLIM 241 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCCccccccCCccCCCCCceEEeeHHHHHHHHHHHHHH
Confidence 999999999999988766542 11 0 0 00 0000 001112334444444333
Q ss_pred -HhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhhHH
Q 021342 211 -CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGA 289 (314)
Q Consensus 211 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~ 289 (314)
+++..-.+..++. ..+.+..+.+.-++|.++|+++.++.|.+.+.|++++|..+.+++.|+.|++|++++|++
T Consensus 242 ~~~~~~l~r~~~~r------~~~~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c~~Gv~~igf~ 315 (390)
T KOG3097|consen 242 LFFLGALKRYGEKR------LASVSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVACALGVSRIGFA 315 (390)
T ss_pred HHHHHHHhhhhhhh------hhcccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhhhhhHHHHHHH
Confidence 2222111110000 112234455666788999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHhHHHHH
Q 021342 290 MAVYGAFDAIFLV 302 (314)
Q Consensus 290 ~~~~G~~~~i~~~ 302 (314)
|+++|+.+++++.
T Consensus 316 m~cfgv~~Av~S~ 328 (390)
T KOG3097|consen 316 MACFGVGDAVASS 328 (390)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988775
No 2
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.94 E-value=1.6e-25 Score=210.85 Aligned_cols=261 Identities=28% Similarity=0.418 Sum_probs=202.9
Q ss_pred cccccchhhhhHHHHHHHHHHHhhHhhhhhh----c------CCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHH
Q 021342 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTV----N------TEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALI 93 (314)
Q Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i----~------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~ 93 (314)
++.++++..+++++++++.+|++...+++++ | .+++.|+.+++++|..++++|+++|++.++.|+||.|+
T Consensus 5 ~~~~~~v~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv 84 (461)
T KOG3098|consen 5 RFELLNVLMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALV 84 (461)
T ss_pred cchhheeeehhhhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHH
Confidence 4788999999999999999999988887765 2 24567999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHH
Q 021342 94 LGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (314)
Q Consensus 94 ~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G 173 (314)
+|..+|..|.++++.+|.+-++.+.++.|+|++.+|++||.|+++++ .++++.++.+++|+..+.+.++|
T Consensus 85 ~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~s----------t~~tie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 85 IGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNS----------TRETIERNISIFWAIGQSSLIIG 154 (461)
T ss_pred HHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhcC----------ChhhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999997 45888999999999999999999
Q ss_pred HHHHHHHHcCCC-CC--CCCchh-------------HHHHHHHHHHHHHHHHHHhccCCccccccccccccccccchHHH
Q 021342 174 NLITLAVLKDDK-GG--STSGTT-------------LLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVS 237 (314)
Q Consensus 174 ~li~~~i~~~~~-~~--~~~~~~-------------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 237 (314)
+++...+..+.+ ++ ..+.++ .++.++..+..++++...++|.++...+++. . +.+..+
T Consensus 155 gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~-----~-~~~~~~ 228 (461)
T KOG3098|consen 155 GIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCKSS-----S-ETSFSE 228 (461)
T ss_pred hHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhhhh-----c-cccHHH
Confidence 998877766543 11 111111 1111222222223333334443333222210 1 146788
Q ss_pred HHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccc---cchhhHHHHHHhhHhHHH
Q 021342 238 LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALG---VSGVGGAMAVYGAFDAIF 300 (314)
Q Consensus 238 ~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg---~~~ig~~~~~~G~~~~i~ 300 (314)
++|.+.+++++++|+++.|.++++|+..+|+.+++|..+.. ...+ .-..++-+...|..+++.
T Consensus 229 ~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~ 295 (461)
T KOG3098|consen 229 LLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIG 295 (461)
T ss_pred HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHH
Confidence 89999999999999999999999999999999999987642 2333 344456777777777773
No 3
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=99.91 E-value=1.5e-23 Score=171.35 Aligned_cols=142 Identities=37% Similarity=0.711 Sum_probs=132.0
Q ss_pred hhHHHHHHHHHHHhhHhhhhhh----c------CCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHH
Q 021342 33 LSCAFLLIFLAYGAAQNLETTV----N------TEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (314)
Q Consensus 33 l~~~~~~~~~~~~~~~~l~~~i----~------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~ 102 (314)
++++|+++|++|++.+++++++ + .++++|+.++++.|..++++++++|++.+++|+|++|++|.++|++|
T Consensus 1 Lg~~f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y 80 (156)
T PF05978_consen 1 LGIGFMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIY 80 (156)
T ss_pred CchHHHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5789999999999999888776 2 24678999999999999999999999999999999999999999999
Q ss_pred HHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 103 VAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 103 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
.+++++++.+.++++.++.|+|++++|++++.|+++++ ++++|++..+++|...+.+.++|+++...+.+
T Consensus 81 ~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s----------~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 81 IASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS----------TEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC----------CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999987 45899999999999999999999999988876
Q ss_pred CC
Q 021342 183 DD 184 (314)
Q Consensus 183 ~~ 184 (314)
+.
T Consensus 151 ~~ 152 (156)
T PF05978_consen 151 GQ 152 (156)
T ss_pred CC
Confidence 54
No 4
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.81 E-value=9.3e-18 Score=158.37 Aligned_cols=227 Identities=11% Similarity=-0.000 Sum_probs=152.2
Q ss_pred hhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhc
Q 021342 52 TTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWV 130 (314)
Q Consensus 52 ~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~ 130 (314)
++.+.++.......++......+++++.++++||+|||++++.+.+.+.+..+.. +.++++.+++.|++.|++.+..++
T Consensus 48 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 127 (394)
T PRK10213 48 QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWA 127 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHH
Confidence 3333333333344567788888999999999999999999999999887755543 678899999999999999999988
Q ss_pred cchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 021342 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (314)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 210 (314)
....++.++. ++++|++++++++...++|..+||.+++.+.+.. +|++.+++ ..++.++..+..
T Consensus 128 ~~~~~i~~~~----------~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-----gw~~~f~~-~~~l~~~~~l~~ 191 (394)
T PRK10213 128 MSASLTMRLV----------PPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-----GWRNVFNA-AAVMGVLCIFWI 191 (394)
T ss_pred HHHHHHHHHc----------CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CHHHHHHH-HHHHHHHHHHHH
Confidence 8888888876 6789999999999999999999999999887654 58765443 333333333222
Q ss_pred -HhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhhH
Q 021342 211 -CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGG 288 (314)
Q Consensus 211 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~ 288 (314)
..+||+++++ + ...+ +..+.+++|+++......+.........+..++..+. ...++....|+
T Consensus 192 ~~~~p~~~~~~--~------~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~ 256 (394)
T PRK10213 192 IKSLPSLPGEP--S------HQKQ-------NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTL 256 (394)
T ss_pred HHHCCCCCccc--c------cchh-------HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHH
Confidence 2345432111 0 0011 1234667777766543322222111112333333332 34567788899
Q ss_pred HHHHHhhHhHHHHHHHHHHHHh
Q 021342 289 AMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 289 ~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
.+..+|+.+.++.. ..+|+.|
T Consensus 257 ~~~~~~~~~iig~~-~~~~l~~ 277 (394)
T PRK10213 257 VLLSFGIASFVGTS-LSSFILK 277 (394)
T ss_pred HHHHHHHHHHHHHH-HHHHHHh
Confidence 99999998888764 5565554
No 5
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.81 E-value=1.3e-17 Score=158.45 Aligned_cols=234 Identities=12% Similarity=0.046 Sum_probs=157.8
Q ss_pred hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhh
Q 021342 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (314)
Q Consensus 50 l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~ 128 (314)
+.++.+.+........+++++++++++++.++++||+|||+++..+.+.+.+..+.. ..++++.++++|+++|++.+..
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~ 121 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFI 121 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 444555555556667889999999999999999999999999999998887766554 6789999999999999998865
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
.+....++.|.. ++++|+++++++.....+|..+||++++.+.++. +|++. |++..++.+++.+
T Consensus 122 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-----gw~~~-f~~~~~~~~i~~~ 185 (413)
T PRK15403 122 ATVGYVTVQEAF----------GQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-----HWKVL-FAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CHHHH-HHHHHHHHHHHHH
Confidence 554455555554 5688999999999999999999999998887553 58755 4444555555544
Q ss_pred H-HHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccccc-ccccchh
Q 021342 209 L-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGV 286 (314)
Q Consensus 209 l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~-~lg~~~i 286 (314)
. .+.+||++++++++ .+.++..++..+.++||+++..............-+....|..+... .++..+.
T Consensus 186 ~~~~~lp~~~~~~~~~---------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~ 256 (413)
T PRK15403 186 GLLLAMPETVKRGAVP---------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQF 256 (413)
T ss_pred HHHHhCCCCccccCCC---------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHH
Confidence 3 34577754322111 01122234455678899888766554443333222333445443322 4567777
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHH
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWL 309 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~ 309 (314)
|+.....+....+++. +.+|+.
T Consensus 257 gl~~~~~~~~~~i~~~-l~~~~~ 278 (413)
T PRK15403 257 AWTQVPVFGAVIVANA-IVARFV 278 (413)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHh
Confidence 7776666666555444 344444
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.81 E-value=8.7e-18 Score=159.48 Aligned_cols=272 Identities=11% Similarity=0.050 Sum_probs=167.7
Q ss_pred cccchhhhhHHHHHHHHHHHhhHh----hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHH
Q 021342 26 YTRDVHILSCAFLLIFLAYGAAQN----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (314)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~----l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~ 101 (314)
.++.++.+.+++++.+........ ++++.+.+........++.++++++++++.+++.||+|||+++..+.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 344445555544443333333332 2333333332333446788889999999999999999999999999999987
Q ss_pred HHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHH
Q 021342 102 FVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (314)
Q Consensus 102 ~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i 180 (314)
..+.. +.+|++.+++.|++.|++.+..+++...++++++ |+++|+++++++.....+|.++|+++++.+
T Consensus 86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWF----------PAYFRARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654 7789999999999999999999888888888886 568999999999999999999999998887
Q ss_pred HcCCC-CCCCCchhHHHHHHHHHHH-HHHHHHHhccCCccccc---ccccc--------c--c--cccc--chHHHHHHH
Q 021342 181 LKDDK-GGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDKGE---KETAD--------A--S--VNFY--SYLVSLSKS 241 (314)
Q Consensus 181 ~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~---~~~~~--------~--~--~~~~--~~~~~~~~~ 241 (314)
..... ....+||+.++ +..+.++ +..+..+++||++++++ +++++ . + ..++ +......++
T Consensus 156 ~~~~~~~~~~gwr~~f~-~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (412)
T TIGR02332 156 LALDGLMALKGWQWLFL-LEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRS 234 (412)
T ss_pred HhCCCCCCccchhHHHH-HHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHH
Confidence 64311 11236976544 4444443 34445567787653211 00000 0 0 0000 000001122
Q ss_pred HHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccccc--ccccchhhHHHHHHhhHhHHHHHHHHHHHH
Q 021342 242 ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAIFLVELLLRWL 309 (314)
Q Consensus 242 ~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~--~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~ 309 (314)
..+.++++..+.....++...........++|.++... .....+.+...+..+++..++.+ ..+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l-~~g~l~ 303 (412)
T TIGR02332 235 MLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMI-WWSRHS 303 (412)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHH-HHHHHh
Confidence 23334456665555544444444444556777655432 23345667777777777776554 444444
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.80 E-value=1.5e-17 Score=156.41 Aligned_cols=228 Identities=13% Similarity=0.039 Sum_probs=151.5
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
.+++|.+...-....+.....+++++++.+++.||+|||+++..+.+.+.+..+.. +.+|++.+++.|+++|++.+..+
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 115 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFW 115 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 34444333333344567778889999999999999999999999998887766554 77899999999999999999888
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (314)
+...++++++. |+++|++++|++.....+|..+||.+++.+.+.. +||+. |++..++.++..++
T Consensus 116 ~~~~~~i~~~~----------~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-----gw~~~-f~~~~~~~~l~~~~ 179 (390)
T PRK03545 116 SITASLAIRVA----------PAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-----GWRTT-FLAIGGGALITLLL 179 (390)
T ss_pred HHHHHHHHHhC----------ChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-----cHHHH-HHHHHHHHHHHHHH
Confidence 88778888876 6789999999999999999999999988876543 58765 44444444443333
Q ss_pred -HHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHH-HHhHHHhhhhccccccccc-cccccchh
Q 021342 210 -MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA-YSGLQQAFVWAEFTKEIVT-PALGVSGV 286 (314)
Q Consensus 210 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~-~~g~~~~f~~~~~~~~~~~-~~lg~~~i 286 (314)
...+||++++ ++ .+ .++..+.+++|+++......+ ......+ ...+.+.++.. ...+....
T Consensus 180 ~~~~~~~~~~~--~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~s~~~~ 243 (390)
T PRK03545 180 LIKLLPLLPSE--HS---------GS----LKSLPLLFRRPALVSLYLLTVVVVTAHFT-AYSYIEPFVQQVAGLSENFA 243 (390)
T ss_pred HHHhCCCCCCC--Cc---------ch----HHHHHHHHhCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCccHH
Confidence 3345543221 10 01 122234667776654332222 1111111 12333433322 23556778
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
+..+..+++.+.+++. ..+|+.|-
T Consensus 244 ~~~~~~~~~~~~~g~~-~~g~l~dr 267 (390)
T PRK03545 244 TLLLLLFGGAGIIGSV-LFSRLGNR 267 (390)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhhc
Confidence 8888888888888776 55666654
No 8
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.5e-18 Score=166.69 Aligned_cols=272 Identities=18% Similarity=0.114 Sum_probs=187.2
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhh--------hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNL--------ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGT 96 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l--------~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~ 96 (314)
+++.++.++.+.+..++.++.+..++ .++.+...+.-+...+++|++|+++.++++.+.||+...+.|....
T Consensus 39 ~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~ 118 (495)
T KOG2533|consen 39 LRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG 118 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH
Confidence 56667777777777777776655533 3333333444445578999999999999999999999999999999
Q ss_pred HHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHH
Q 021342 97 TGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNL 175 (314)
Q Consensus 97 ~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~l 175 (314)
+++.++.+. ...+|.+.+++.|++.|+.+|..||+...+++.++ .++|||..+|++++..++|.++|++
T Consensus 119 ~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy----------~~~e~g~r~~~~~a~~~~g~i~ggl 188 (495)
T KOG2533|consen 119 ILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWY----------GKSERGLRMGIWYASASLGNIFGGL 188 (495)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhc----------ChhhhhhhHHHHHHhcchhhHHHHH
Confidence 999888755 46789999999999999999999999999999998 4589999999999999999999999
Q ss_pred HHHHHHcCCC-CCCCCchhHHHHHHHHHHHH-HHHHHHhccCCccc---ccccc-------ccccccccchHHHHHHHHH
Q 021342 176 ITLAVLKDDK-GGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDK---GEKET-------ADASVNFYSYLVSLSKSIT 243 (314)
Q Consensus 176 i~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~ 243 (314)
+++.+.+..+ .+..+|||. |++..++++. +++.++++|+.+.+ .++++ .|.+.....+.+.+.++..
T Consensus 189 iA~g~~~~~~~~~~~gW~~~-FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (495)
T KOG2533|consen 189 IAYGVFKLNGSGGLAGWRWL-FIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFK 267 (495)
T ss_pred HHHHhhhhcCCCCcCCceee-hhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHH
Confidence 9999766333 234679754 6666666554 55666778864321 11111 0111111000002345667
Q ss_pred HhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccc---cchhhHHHHHHhhHhHHHHHHHHHH
Q 021342 244 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALG---VSGVGGAMAVYGAFDAIFLVELLLR 307 (314)
Q Consensus 244 ~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg---~~~ig~~~~~~G~~~~i~~~~~l~~ 307 (314)
+.++||+++......+.+.........+.|-+... ..+. ....+....+.|+...+....+.-|
T Consensus 268 ~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr 335 (495)
T KOG2533|consen 268 EALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDR 335 (495)
T ss_pred HHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHH
Confidence 78999999999888877776665555555533333 1122 2233345556666666655544444
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.78 E-value=2.4e-17 Score=157.43 Aligned_cols=233 Identities=10% Similarity=0.002 Sum_probs=153.2
Q ss_pred hhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhc
Q 021342 52 TTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWV 130 (314)
Q Consensus 52 ~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~ 130 (314)
++.+.+........++..+.+++++++++++.||+|||+++.++.+...+..+.. +.++++.++..|++.|++.|..++
T Consensus 51 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~ 130 (434)
T PRK11663 51 ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWP 130 (434)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccch
Confidence 3344333333334567778889999999999999999999999999887766654 678899999999999999998888
Q ss_pred cchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH-HHHHH
Q 021342 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVIT-LGTIL 209 (314)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 209 (314)
....++.+++ ++++|+++++++.....+|..+||++++.+.... +|++.+++. .++.+ .+++.
T Consensus 131 ~~~~~~~~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----gw~~~f~~~-~i~~~~~~~~~ 194 (434)
T PRK11663 131 VCAKLLTAWY----------SRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-----GWRYGMMIA-GIIAIVVGLFL 194 (434)
T ss_pred HHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----cHHHHHHHH-HHHHHHHHHHH
Confidence 8777888876 5689999999999999999999999988887653 587654433 33333 33344
Q ss_pred HHhccCCcccc---cc-----ccccccc---cccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc
Q 021342 210 MCFLRKEEDKG---EK-----ETADASV---NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT 278 (314)
Q Consensus 210 ~~~l~~~~~~~---~~-----~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~ 278 (314)
.++++|+++.+ +. +.++... +++.+.++.++. ..+++++.+.+...++...........++|.+...
T Consensus 195 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 272 (434)
T PRK11663 195 CWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTK--YVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSE 272 (434)
T ss_pred HHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHH--HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45567643211 00 0000000 011122222221 25678877776554444444444444566655422
Q ss_pred -cccccchhhHHHHHHhhHhHHHHH
Q 021342 279 -PALGVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 279 -~~lg~~~ig~~~~~~G~~~~i~~~ 302 (314)
..++..+.+..+.++++...++.+
T Consensus 273 ~~g~s~~~a~~~~~~~~~~~~~g~~ 297 (434)
T PRK11663 273 TLGVDLVTANSAVSMFELGGFIGAL 297 (434)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 356667778777877777776554
No 10
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.77 E-value=1.6e-16 Score=148.03 Aligned_cols=234 Identities=13% Similarity=0.018 Sum_probs=153.5
Q ss_pred hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhh
Q 021342 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (314)
Q Consensus 50 l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~ 128 (314)
++++.+.+........++..+...+++++.+++.||+|||+++..+.+...+..+.. ..++.+.+++.|++.|++.+..
T Consensus 31 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 110 (385)
T TIGR00710 31 IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAG 110 (385)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHH
Confidence 344444444333444677788889999999999999999999999998877655553 6688889999999999999998
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH-
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT- 207 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~- 207 (314)
.+...+++.|+. ++++|++.+++......+|..+|+.+++.+.+.. +|++.++ +..++.++..
T Consensus 111 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-----~~~~~~~-~~~~~~~~~~~ 174 (385)
T TIGR00710 111 SVISQALVRDIY----------PGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-----SWHAIFA-FLSLAGILLSA 174 (385)
T ss_pred HHHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CHHHHHH-HHHHHHHHHHH
Confidence 888888888876 6689999999999999999999999998877653 4765433 3333333333
Q ss_pred HHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchh
Q 021342 208 ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGV 286 (314)
Q Consensus 208 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~i 286 (314)
+..+++||++++++++ + .++..++..+.+++|+.+....................|..+. ....+..+.
T Consensus 175 ~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 244 (385)
T TIGR00710 175 LIFFILPETLPYEARI-------Q---ISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVF 244 (385)
T ss_pred HHHHhCCCCCCCcccC-------C---HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHH
Confidence 3334456543322111 0 1112233345667777766543322211111112223343332 234667888
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
|......++...+++. ..+++.|
T Consensus 245 g~~~~~~~~~~~~~~~-~~g~l~~ 267 (385)
T TIGR00710 245 GLLFALNIIAMIFGGF-LNGRFIK 267 (385)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHH
Confidence 8888888887777655 4555544
No 11
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.77 E-value=4.3e-17 Score=153.74 Aligned_cols=232 Identities=10% Similarity=0.010 Sum_probs=156.5
Q ss_pred hhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhh
Q 021342 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASI 127 (314)
Q Consensus 49 ~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~ 127 (314)
.++++++.+........++.++++++++++.+++.||+|||+++..+...+++..+.. +.++++.++.+|+++|++.+.
T Consensus 34 ~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~ 113 (393)
T PRK09705 34 QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGI 113 (393)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHH
Confidence 4455555554444556788889999999999999999999999999999998877764 789999999999999999999
Q ss_pred hhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH
Q 021342 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (314)
Q Consensus 128 ~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (314)
.++....++.++. +++|+++++++.+....|..+|+.++..+..+. .+||+.+++ +.+..++..
T Consensus 114 ~~~~~~~~~~~~~-----------~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~----~~w~~~~~~-~~~~~~~~~ 177 (393)
T PRK09705 114 IQAVMPSVIKRRF-----------QQRTPLVMGLWSAALMGGGGLGAAITPWLVQHS----ETWYQTLAW-WALPAVVAL 177 (393)
T ss_pred HhhhhhHHHHHHc-----------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCHHHHHHH-HHHHHHHHH
Confidence 8888777766653 478999999999999999999999988776543 158765333 222223333
Q ss_pred HHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhh
Q 021342 208 ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVG 287 (314)
Q Consensus 208 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig 287 (314)
+..+...+.+++++++ ++.+. .+.+++++.+.+...+............+.|.++....++..+.|
T Consensus 178 ~~~~~~~~~~~~~~~~-------~~~~~-------~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag 243 (393)
T PRK09705 178 FAWWWQSAREVASSHK-------TTTTP-------VRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSG 243 (393)
T ss_pred HHHHHHhcCCCccccC-------CCcCC-------cccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhh
Confidence 3222222211111100 00000 123456665554444433333333444556655555566678889
Q ss_pred HHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 288 GAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 288 ~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
..+.++++.++++++ ..+++.|-
T Consensus 244 ~~~~~~~i~~i~g~~-~~g~l~~r 266 (393)
T PRK09705 244 SLLALMTLGQAAGAL-LMPAMARH 266 (393)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHhh
Confidence 999999999888776 45555553
No 12
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.77 E-value=1.9e-16 Score=148.25 Aligned_cols=232 Identities=8% Similarity=-0.034 Sum_probs=148.8
Q ss_pred hhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhh-chhhhHHHHHHHHhhhhhhh
Q 021342 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL-FPSWYTMVPASLYLGFAASI 127 (314)
Q Consensus 49 ~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~-~~~~~~l~~~r~l~G~g~~~ 127 (314)
.++++++.+...-....+.+++.+++++++.|+++||+|||+++..+............ .+++..++.+|++.|+|.+.
T Consensus 16 ~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~ 95 (368)
T TIGR00903 16 LVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF 95 (368)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH
Confidence 34455554433323336788899999999999999999999987666554444333222 36899999999999999986
Q ss_pred hhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-H
Q 021342 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-G 206 (314)
Q Consensus 128 ~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~ 206 (314)
.. .....++++. |+++|+++++++.....+|..++++++..+..+. +||+. |++..+++++ .
T Consensus 96 ~~-~~~~~~~~~~----------~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-----gWr~~-f~~~~~l~~~~~ 158 (368)
T TIGR00903 96 LL-NAFAPAASQI----------REERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-----GLQLL-IIPIAAVAAAGI 158 (368)
T ss_pred HH-HHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----chHHH-HHHHHHHHHHHH
Confidence 44 3344456654 6799999999999999999999999998887653 59765 4443444444 3
Q ss_pred HHHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchh
Q 021342 207 TILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGV 286 (314)
Q Consensus 207 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~i 286 (314)
++..+++||+++.+++. . +.+ +..++..+.+++|..+.+....+...........+.|.++....++.+ .
T Consensus 159 ~~~~~~lp~~p~~~~~~---~---~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~ 228 (368)
T TIGR00903 159 ILVLAALPALPFQAAEG---F---GFK---DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-A 228 (368)
T ss_pred HHHHHHcCCCCCCCCCC---c---chH---HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-H
Confidence 34456688754322111 0 001 112334457888888877655544443343445688877754344443 4
Q ss_pred hHHHHHHhhHhHHHHHHHHHH
Q 021342 287 GGAMAVYGAFDAIFLVELLLR 307 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~ 307 (314)
+....+..+...++.....-|
T Consensus 229 ~~~~~l~~~~g~~g~~~~~d~ 249 (368)
T TIGR00903 229 GDAVALAILAGLIGVAVIPDR 249 (368)
T ss_pred HHHHHHHHHHHHHHHHHhhHH
Confidence 555556556666655433333
No 13
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.76 E-value=3.3e-16 Score=147.99 Aligned_cols=235 Identities=11% Similarity=0.008 Sum_probs=150.8
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
.++.+.+........+...+.+.+++++.|+++||+|||+++.++.+.+.+..+.. ..++++.++..|++.|++.+..+
T Consensus 40 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 119 (406)
T PRK15402 40 VEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIG 119 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHH
Confidence 34444444444445678888899999999999999999999999998877665553 66788889999999999999887
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (314)
+...+++.|.. ++++|++.+++.......|..+||.+++.+.++. +|++.+ ++..++.++..+.
T Consensus 120 ~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-----~w~~~~-~~~~~~~~~~~~~ 183 (406)
T PRK15402 120 AVGYAAIQESF----------EEADAIKITALMANVALLAPLLGPLVGAALIHVL-----PWRGMF-VLFAALAALSFFG 183 (406)
T ss_pred HHHHHHHHHHh----------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CccHHH-HHHHHHHHHHHHH
Confidence 77777777765 5678889899988888889999999988876643 587654 4444444443333
Q ss_pred -HHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhh
Q 021342 210 -MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVG 287 (314)
Q Consensus 210 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig 287 (314)
.+.+||++++++++ .+.++..++..+.+++|+.+...............+....|.++. ...++..+.|
T Consensus 184 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g 254 (406)
T PRK15402 184 LWRAMPETAGRVGEK---------LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYG 254 (406)
T ss_pred HHHhCCCCCcccccc---------ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHH
Confidence 34456543221111 011122233345678888776655444333332223333443322 2345566677
Q ss_pred HHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 288 GAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 288 ~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
+.....++...++.. ..+++.|.
T Consensus 255 ~~~~~~~~~~~~g~~-~~g~l~~r 277 (406)
T PRK15402 255 LLQVPVFGALIAGNL-TLARLTSR 277 (406)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHh
Confidence 766666655555443 55666543
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.76 E-value=1.9e-16 Score=149.32 Aligned_cols=226 Identities=13% Similarity=0.057 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
...+...+...+++++.++++||+|||+++..+.+...+..+. .+.++++.+++.|++.|++.+..++....++.++.
T Consensus 54 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~- 132 (406)
T PRK11551 54 WAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAV- 132 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc-
Confidence 3456777888889999999999999999999998877665544 36788999999999999999988888888888876
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccCCcccc
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDKG 220 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~ 220 (314)
++++|+++++++......|..++++++..+.+.. +|++.++ +..++.++ ..+..+++||+++..
T Consensus 133 ---------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 197 (406)
T PRK11551 133 ---------GPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-----AWRHIFY-VGGVGPLLLVPLLMRWLPESRAFA 197 (406)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-----CHHHHHH-HHHHHHHHHHHHHHHhCCCChhHH
Confidence 5689999999999999999999999987665432 4765444 33333333 333345577764322
Q ss_pred ccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHHH
Q 021342 221 EKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIF 300 (314)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~ 300 (314)
+++.++ +++++.. +...+..+.++...+...++...........++|.+.....++....|....++++.+.++
T Consensus 198 ~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~ 271 (406)
T PRK11551 198 QAAGAG---KQRAPVL---RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALG 271 (406)
T ss_pred hccCcc---hhhhhhH---HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHH
Confidence 111000 0111111 1111111122222222222222222223344455554445566778888888888888876
Q ss_pred HHHHHHHHHhh
Q 021342 301 LVELLLRWLYF 311 (314)
Q Consensus 301 ~~~~l~~~~~~ 311 (314)
++ ..+++.|.
T Consensus 272 ~~-~~g~l~dr 281 (406)
T PRK11551 272 SL-LIGALMDR 281 (406)
T ss_pred HH-HHHHHHHH
Confidence 65 55665543
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.6e-16 Score=147.34 Aligned_cols=254 Identities=13% Similarity=0.034 Sum_probs=179.3
Q ss_pred ccccchhhhhHHHHHHHHHHHhhH----hhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQ----NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~----~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~ 100 (314)
+.++.++.+.++.+.+-+.-.... .+.++++.+....-...+++-.+.+++.++...+.+|+.||++++..+.++.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 555666677777665554433333 4444555544444445678888999999999999999999999999999998
Q ss_pred HHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHH
Q 021342 101 LFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (314)
Q Consensus 101 ~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~ 179 (314)
+..+. .+++|++.++++|++.|++.|..|+...++.++.. ||++|++++++......++.++|..++.+
T Consensus 90 ~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv----------pp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 90 VSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLV----------PPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 87765 48999999999999999999999999999999886 78999999999999999999999999999
Q ss_pred HHcCCCCCCCCchhHHHHHHHHHHHHHHH-HHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHH-
Q 021342 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL- 257 (314)
Q Consensus 180 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~- 257 (314)
+-+.. +||..++.+ ..++++..+ +...+|+++..+++ +.+ .++..+.+|+|+.+.....
T Consensus 160 ig~~~-----GWR~~F~~i-a~l~ll~~~~~~~~lP~~~~~~~~---------~~~----~~~~~~~l~~p~v~~~l~~t 220 (394)
T COG2814 160 LGQLF-----GWRATFLAI-AVLALLALLLLWKLLPPSEISGSL---------PGP----LRTLLRLLRRPGVLLGLLAT 220 (394)
T ss_pred HHHHh-----hHHHHHHHH-HHHHHHHHHHHHHhCCCccCCCCC---------Ccc----hhHHHHHhcCchHHHHHHHH
Confidence 97765 598764444 555555444 34557711111111 112 2233457888888775533
Q ss_pred -HHHHhHHHhhhhcccccccc-ccccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 258 -FAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 258 -~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
..+.|.+..|. +...... ...+..+.+++++.+||+...+++. +-+|+.|
T Consensus 221 ~l~~~g~F~~ft--Yi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~-~gGrl~d 272 (394)
T COG2814 221 FLFMTGHFALYT--YIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNL-LGGRLAD 272 (394)
T ss_pred HHHHcchhhhHH--hHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHH-HHhhhcc
Confidence 23334333322 2222222 1246688899999999999999887 6666655
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.76 E-value=1.6e-16 Score=150.75 Aligned_cols=243 Identities=9% Similarity=0.023 Sum_probs=148.5
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
+++.+.++.......++..+...+++++.|+++||+|||+++.++.+...+..+.. +.++.+.++++|++.|++.+..+
T Consensus 45 ~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~ 124 (426)
T PRK12307 45 KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEY 124 (426)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHH
Confidence 34445444333445677888999999999999999999999999999887766654 67889999999999999999888
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (314)
+....++++++ ++++|+++.+++.....+|.++++.+...+.+.. +|++.+++ .....++...+
T Consensus 125 ~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-----~w~~~f~i-~~~~~~~~~~~ 188 (426)
T PRK12307 125 ACASTYAVESW----------PKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-----GWRAAFFV-GLLPVLLVIYI 188 (426)
T ss_pred HHHHHHHHHhC----------CHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-----CHHHHHHH-HHHHHHHHHHH
Confidence 88888888876 6789999999999999999999998877765443 58765443 22221221111
Q ss_pred HHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHh---hhhccccccccccccccchh
Q 021342 210 MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQA---FVWAEFTKEIVTPALGVSGV 286 (314)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~---f~~~~~~~~~~~~~lg~~~i 286 (314)
....||+++.++++.++..++++..+++..++..+.+++++.......++......+ ...+.+|.+......+....
T Consensus 189 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 268 (426)
T PRK12307 189 RARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVV 268 (426)
T ss_pred HHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 122333321111100000000011111111122334556655433322211111111 12345565444444556777
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
+..+.+.++.+.+++. ..+++.|
T Consensus 269 ~~~~~~~~~~~~~g~~-~~g~l~d 291 (426)
T PRK12307 269 SNLMTAAAFGTVLGNI-VWGLCAD 291 (426)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHH
Confidence 8888888888877665 4455544
No 17
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.76 E-value=2.4e-16 Score=147.92 Aligned_cols=251 Identities=10% Similarity=-0.021 Sum_probs=159.5
Q ss_pred cchhhhhHHHHHHHHHHHhhH----hhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHH
Q 021342 28 RDVHILSCAFLLIFLAYGAAQ----NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (314)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~----~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~ 103 (314)
+++..+.++.+.......... .++++.+.+........++..+++.++++++|++.||+|||+++..+.+...+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 344444444443333332322 3344444443333445688889999999999999999999999999998887765
Q ss_pred Hhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 104 AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 104 ~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
+.. +.++++.+++.|++.|++.+...+....++.++. ++++|++.++++.....+|..+||.+++.+.+
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKII----------KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC----------ChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 554 7789999999999999999988777666677665 56789999999999999999999999888765
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHH-HHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHH
Q 021342 183 DDKGGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 261 (314)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~ 261 (314)
.. +||+.++ +..++.++.. ...+.+||+++++++ +.++. .+.+++++.+......+..
T Consensus 153 ~~-----gwr~~f~-~~~~~~~~~~~~~~~~lp~~~~~~~~-----------~~~~~----~~~~~~~~~~~~~~~~~~~ 211 (382)
T PRK10091 153 EF-----SWRYTFL-LIAVFNIAVLASIYFWVPDIRDEAKG-----------GLREQ----FHFLRSPAPWLIFAATMFG 211 (382)
T ss_pred hc-----cHHHHHH-HHHHHHHHHHHHHHHhCCCCCccccc-----------CHHHH----HHHhcChHHHHHHHHHHHH
Confidence 43 5876544 3344333333 333456664321110 11111 2345666655544332221
Q ss_pred hHHHhhhhcccccccc-ccccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 262 GLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 262 g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
......+.+.++.++. ...++..+.++...+.++..++++. ..+|+.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~~ 260 (382)
T PRK10091 212 NAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNL-LSGRLSG 260 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhH-HHheecc
Confidence 1111112233343333 2456678888888899988888765 5555544
No 18
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.76 E-value=1.9e-16 Score=146.38 Aligned_cols=234 Identities=12% Similarity=0.006 Sum_probs=145.3
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
.++++.+...-....++.++.+++++++.|+++||+|||+++.++.+.+.+..+.. +.++++.++++|++.|++.+..+
T Consensus 30 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 109 (377)
T TIGR00890 30 GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAY 109 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 33444333333344678889999999999999999999999999998887765554 77899999999999999999877
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-HHH
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTI 208 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 208 (314)
+....++.++. +++|+++.+++.....+|..+++.+...+.+.. +||+. |++..+..++ .++
T Consensus 110 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~-f~~~~~~~~~~~~~ 172 (377)
T TIGR00890 110 GIALNTAVKWF-----------PDKRGLASGIIIGGYGLGSFILSPLITSVINLE-----GVPAA-FIYMGIIFLLVIVL 172 (377)
T ss_pred HhHHHHHHHHc-----------CcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-----cHHHH-HHHHHHHHHHHHHH
Confidence 66555555543 468999999999999999877555544444332 58755 4443444443 333
Q ss_pred HHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhhH
Q 021342 209 LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGG 288 (314)
Q Consensus 209 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~ 288 (314)
..+++++++++++++.++ .++.+ ++..+.+++++.+.+...++...+......+.++.+.....++.++.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (377)
T TIGR00890 173 GAFLIGYPPGQLIKTNIE-----VSVKD---YTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVL 244 (377)
T ss_pred HHHheecCchhccccCcc-----cchhh---hhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 445565544322111100 00111 1223456777776655444443333333333333222223345666778
Q ss_pred HHHHHhhHhHHHHHHHHHHHHh
Q 021342 289 AMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 289 ~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
...++++.+.+++. ..+++.|
T Consensus 245 ~~~~~~~~~~~~~~-~~g~l~d 265 (377)
T TIGR00890 245 AVSISSIFNGGGRP-FLGALSD 265 (377)
T ss_pred HHHHHHHHHHHHHH-HHHHHHH
Confidence 88888888877665 4455554
No 19
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.75 E-value=3.2e-16 Score=152.24 Aligned_cols=154 Identities=16% Similarity=0.117 Sum_probs=116.5
Q ss_pred hhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhh
Q 021342 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASI 127 (314)
Q Consensus 49 ~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~ 127 (314)
.+.+++|.+.....+..+.+.+.++++.++.|+++||+|||++++++.+.+.+..+. .+.+|++.++++|+++|+|.+.
T Consensus 31 ~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~ 110 (495)
T PRK14995 31 TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAM 110 (495)
T ss_pred HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 334455554444445567777888899999999999999999999999998876655 4789999999999999999998
Q ss_pred hhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH
Q 021342 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (314)
Q Consensus 128 ~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (314)
..+.....+.+.. +++++|++++|++.....+|..+||.+++.+.++. +|||.+++ ...+.++..
T Consensus 111 ~~~~~~~~l~~~~---------~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-----gwr~~f~i-~~~~~~~~~ 175 (495)
T PRK14995 111 IVPATLAGIRATF---------TEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-----YWGSVFLI-NVPIVLVVM 175 (495)
T ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----ChHHHHHH-HHHHHHHHH
Confidence 7766555554442 25689999999999999999999999999987764 59876544 344444433
Q ss_pred H-HHHhccCCc
Q 021342 208 I-LMCFLRKEE 217 (314)
Q Consensus 208 ~-l~~~l~~~~ 217 (314)
+ ..+++|+++
T Consensus 176 ~l~~~~l~~~~ 186 (495)
T PRK14995 176 GLTARYVPRQA 186 (495)
T ss_pred HHHHHhCCCCC
Confidence 3 335566643
No 20
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.75 E-value=8.3e-17 Score=149.24 Aligned_cols=244 Identities=12% Similarity=0.043 Sum_probs=159.2
Q ss_pred hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhh
Q 021342 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (314)
Q Consensus 50 l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~ 128 (314)
++++.+.+........++..+...+++++.+.++||+|||+++.++.+.+.+..... +.++++.++++|++.|++.+..
T Consensus 20 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 99 (399)
T TIGR00893 20 LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPF 99 (399)
T ss_pred HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 344444443333344677888889999999999999999999999998887665554 6678999999999999999999
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH-
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT- 207 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~- 207 (314)
+++...++.++. |+++|++.++++.....+|..+|+.+++.+.++. +|++. |....++.++..
T Consensus 100 ~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~~~~~-~~~~~~~~~~~~~ 163 (399)
T TIGR00893 100 FPGIILIVASWF----------PASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-----SWQWA-FIIEGVLGIIWGV 163 (399)
T ss_pred hhHHHHHHHHhC----------CHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-----CchHH-HHHHHHHHHHHHH
Confidence 988888888886 6689999999999999999999999998877654 48654 433344433333
Q ss_pred HHHHhccCCcccccc-ccc-cc---cc-----cccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc
Q 021342 208 ILMCFLRKEEDKGEK-ETA-DA---SV-----NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 277 (314)
Q Consensus 208 ~l~~~l~~~~~~~~~-~~~-~~---~~-----~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~ 277 (314)
+..++++|++++++. +++ +. +. +++++..+..++..+.+++|+.+......+............+|.+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (399)
T TIGR00893 164 LWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLV 243 (399)
T ss_pred HhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 333445554322110 000 00 00 000000011122345677888777666555555544455555564432
Q ss_pred c-cccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 278 T-PALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 278 ~-~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
. ...+..+.++...+.++.+.+++. ..+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~ 276 (399)
T TIGR00893 244 QERGLSILEAGFMASLPGIVGFIGMI-LGGRLSD 276 (399)
T ss_pred HHhcccHHHhhHHHHHHHHHHHHHHH-HHHHHHH
Confidence 2 234566778888888887777654 4444443
No 21
>PRK10133 L-fucose transporter; Provisional
Probab=99.74 E-value=9.5e-16 Score=146.74 Aligned_cols=280 Identities=11% Similarity=0.068 Sum_probs=168.7
Q ss_pred CCcccCCccccCccccccchhhhhHHHHHHHHHHHhhHhh----hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhh
Q 021342 11 APLVADSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNL----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVL 86 (314)
Q Consensus 11 ~~l~~~~~~p~n~~~~~~~~~~l~~~~~~~~~~~~~~~~l----~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (314)
+.-=.-+|||.+-+..+..+.++.+.++..-........+ +++.+.+........+.+++++.+++++.++++||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~ 88 (438)
T PRK10133 9 QSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL 88 (438)
T ss_pred hhhhccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333456677776666777777777666554444443333 334443333333345778889999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHhh----hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHH
Q 021342 87 GSKNALILGTTGYWLFVAAN----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEF 162 (314)
Q Consensus 87 G~k~~l~~g~~~~~~~~~~~----~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~ 162 (314)
|||+++..+.+.+.+..+.. ..+++..++++|+++|+|.+..+++...++.++. ++++|++.++++
T Consensus 89 G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~----------~~~~~~~~~s~~ 158 (438)
T PRK10133 89 SYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG----------PESSGHFRLNLA 158 (438)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC----------ChhhHHHHHHHH
Confidence 99999999999987765442 4678999999999999999999999888888764 456666679999
Q ss_pred HHHHhhhhHHHHHHHHHHHc-CCC------------CCC--------CCchhHHHHHHHHHHHHHHHHHHhccCCccccc
Q 021342 163 WGMFASHQFVGNLITLAVLK-DDK------------GGS--------TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGE 221 (314)
Q Consensus 163 ~~~~~~g~~~G~li~~~i~~-~~~------------~~~--------~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 221 (314)
...+.+|..+|++++..+.. ... +.- .+|+..++.+..+..++..+ ..+.+.|+.+.+
T Consensus 159 ~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~-~~~~~~p~~~~~ 237 (438)
T PRK10133 159 QTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALL-IMLTKFPALQSD 237 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCcc
Confidence 99999999999999876541 100 000 12332222222222222222 222222221111
Q ss_pred cccccccccccchHHHHHHHHHHhhcChhHHHHHH-HHHHHhHHHhhhhccccccccc--cccccchhhHHHHHHhhHhH
Q 021342 222 KETADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDA 298 (314)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p-~~~~~g~~~~f~~~~~~~~~~~--~~lg~~~ig~~~~~~G~~~~ 298 (314)
+.. + ++..+..+ +..+.+++|++..... .+++.+.+.+ .+++.+.++.. ..++....|+.+..+++..+
T Consensus 238 ~~~---~-~~~~~~~~---~~~~ll~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~ 309 (438)
T PRK10133 238 NHS---D-AKQGSFSA---SLSRLARIRHWRWAVLAQFCYVGAQTA-CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFF 309 (438)
T ss_pred ccc---c-ccccchhh---hHHHHHhCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHH
Confidence 110 0 01111112 2234567777655433 2333333332 23345544322 35668888999999999888
Q ss_pred HHHHHHHHHHHh
Q 021342 299 IFLVELLLRWLY 310 (314)
Q Consensus 299 i~~~~~l~~~~~ 310 (314)
++.. ..+|+.+
T Consensus 310 vG~~-~~g~l~~ 320 (438)
T PRK10133 310 IGRF-TGTWLIS 320 (438)
T ss_pred HHHH-HHHHHHH
Confidence 8765 4555554
No 22
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.74 E-value=1e-17 Score=155.51 Aligned_cols=200 Identities=15% Similarity=0.137 Sum_probs=152.7
Q ss_pred CCCCCCCCccc-CCccccCccccccchhhhhHHHHHHHHHHHhhH----hhhhhhcCCC-ChhHHHHHHHHHHHHHHHhh
Q 021342 5 DSRDEEAPLVA-DSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQ----NLETTVNTEG-NLGTISLGILYTSFTCFSLV 78 (314)
Q Consensus 5 ~~~~~~~~l~~-~~~~p~n~~~~~~~~~~l~~~~~~~~~~~~~~~----~l~~~i~~~~-~~g~~~~~~~~~~~~~~~~~ 78 (314)
+..++.+|+.. |+.+..+++..++.++++.+..++.+.-..... .+++-.|.++ ..|.+ ..++..++.+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll-~~vf~v~~~i~sPl 87 (493)
T KOG1330|consen 9 TTTSSGNPLIELEGLDHLSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLL-QTVFIVVFMIASPL 87 (493)
T ss_pred CCccCCCcccccccccccccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccch-hHHHHHHHHHHHHH
Confidence 44557777777 333446887888777777776666655443333 3344445443 34444 46888999999999
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhh
Q 021342 79 ASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGS 157 (314)
Q Consensus 79 ~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~ 157 (314)
.|.+.||+-||+++.+|..+|.+.+++. +...++++.++|.+.|+|++...+...++++|.+ ++++|++
T Consensus 88 ~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f----------~~~~Rs~ 157 (493)
T KOG1330|consen 88 FGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSF----------PDDKRSR 157 (493)
T ss_pred HHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcC----------cchhhhH
Confidence 9999999999999999999998877764 6788999999999999999999999999999987 6789999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc
Q 021342 158 FNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (314)
Q Consensus 158 ~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 219 (314)
.+++|+.+...|..+|.+.+..+.+... +|||-+....+...+++++.+++++||++.
T Consensus 158 ~~~ify~~ipvGsglG~vvgs~va~~~~----~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 158 VLGIFYFAIPVGSGLGYVVGSVVASLTF----WWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred HHHHhhhhcccccceeEEeeeeeccCcc----ceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 9999999999999999999888766542 387654444333344566677889998763
No 23
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.74 E-value=4.8e-16 Score=144.93 Aligned_cols=235 Identities=13% Similarity=0.072 Sum_probs=155.7
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
.++.|.+........++..+...+++++.++++||+|||+++..+.++..+..... +.++.+.+++.|++.|++.+..+
T Consensus 18 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 97 (377)
T PRK11102 18 AADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAAS 97 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 34444443333344577788889999999999999999999999998887766554 66788889999999999999888
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH-H
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-I 208 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 208 (314)
+...+++.+.. ++++|++.+++......+|..+||++++.+.+.. +|++. |++...+.++.. +
T Consensus 98 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~~~~~-~~~~~~~~~~~~~~ 161 (377)
T PRK11102 98 VVINALMRDMF----------PKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-----SWHAI-FWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----ChHHH-HHHHHHHHHHHHHH
Confidence 88888888875 5689999999999999999999999988887643 47654 444444444433 3
Q ss_pred HHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccccchhh
Q 021342 209 LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVG 287 (314)
Q Consensus 209 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~~~ig 287 (314)
..+++||+.++++++ +.+.++..++..+.+++++.+....................|..+.. ..++..+.|
T Consensus 162 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g 233 (377)
T PRK11102 162 VFFFIPETLPKERRQ--------PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFG 233 (377)
T ss_pred HHHhCCccCcccccC--------CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHH
Confidence 345667654322211 11122233444456777776654433322222122222333333332 356678888
Q ss_pred HHHHHHhhHhHHHHHHHHHHHHh
Q 021342 288 GAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 288 ~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
+.+.+.++...+++. ..+|+.|
T Consensus 234 ~~~~~~~~~~~~~~~-~~g~l~~ 255 (377)
T PRK11102 234 YYFALNIVFLFVMTI-INSRFVR 255 (377)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHH
Confidence 888888888777654 4555554
No 24
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.74 E-value=8.1e-16 Score=148.71 Aligned_cols=229 Identities=14% Similarity=0.042 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.+...+++.+++++.|+++||+|||+++..+.+.+.+..+.. +.++...++++|++.|++.+...+ ...+++++.
T Consensus 77 ~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~--- 152 (476)
T PLN00028 77 GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVS-CQYWMSTMF--- 152 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHH-HHHHHHHhc---
Confidence 456667888899999999999999999999988887666543 667888888999999999886433 334566665
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC---C-CCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD---D-KGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 219 (314)
++++||+++|+.....++|..+|+.+...+... . .....+||+.++ +..++.++..++.++++++.++
T Consensus 153 -------~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~-i~g~l~l~~~l~~~~~~~~~p~ 224 (476)
T PLN00028 153 -------NGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFF-VPGLLHIIMGILVLTLGQDLPD 224 (476)
T ss_pred -------ChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHH-HHHHHHHHHHHHHHHHcCcCCC
Confidence 668999999999888788888877665444321 1 001136876644 4444444433333444332221
Q ss_pred cc-cccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccccchhhHHHHHHhhHh
Q 021342 220 GE-KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFD 297 (314)
Q Consensus 220 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~~~ig~~~~~~G~~~ 297 (314)
.+ ++.++....++++..+ ...+.+++++.+.+...++...........+.|.++.. ..+.....+....++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~ 301 (476)
T PLN00028 225 GNYRELKKSGTMPKDSFSK---VLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMN 301 (476)
T ss_pred CchhhHHhcCccccccHHH---HHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 11 0000000001112222 22345777776665544332211111223445554433 3566778888888899888
Q ss_pred HHHHHHHHHHHH
Q 021342 298 AIFLVELLLRWL 309 (314)
Q Consensus 298 ~i~~~~~l~~~~ 309 (314)
.++++ ..+++.
T Consensus 302 ~ig~~-~~G~ls 312 (476)
T PLN00028 302 LFARP-AGGYLS 312 (476)
T ss_pred HHHHh-hhHHHH
Confidence 88775 444444
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.74 E-value=7.4e-16 Score=144.30 Aligned_cols=177 Identities=13% Similarity=0.034 Sum_probs=125.7
Q ss_pred ccchhhhhHHHHHHHHHHHhhHhh----hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHH
Q 021342 27 TRDVHILSCAFLLIFLAYGAAQNL----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (314)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~l----~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~ 102 (314)
++.+..+.++.+...........+ +++.+.+........++..+...+++++.|.++||+|||++++++.+...+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 344444445444444433333333 3333433333334467888899999999999999999999999999888766
Q ss_pred HHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 103 ~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
.+.. +.++++.++..|++.|++.+..++...+++.+.. ++++|+++++++......|.++|+.+++.+.
T Consensus 91 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 91 TLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESW----------PKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhC----------ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554 6788999999999999999999888888888876 6689999999999999999999999988876
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 182 KDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
...+ .+|++. |++..+..++..+....+||++
T Consensus 161 ~~~~---~~w~~~-f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 161 PVWG---DGWRAL-FFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HhcC---ccHHHH-HHHHHHHHHHHHHHHHhCCCCh
Confidence 5432 247654 3333333334444445567654
No 26
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.73 E-value=5.5e-16 Score=145.37 Aligned_cols=254 Identities=16% Similarity=0.161 Sum_probs=160.1
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhh----hhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLE----TTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~----~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~ 100 (314)
+++|++..+.++.++.-.++.....+. ++.+.+........+...+...+++++.++++||+|||+++..+.+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777777666555544443333 3333332223334677778888999999999999999999999998887
Q ss_pred HHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHH
Q 021342 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (314)
Q Consensus 101 ~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~ 179 (314)
+..+.. +.++++.++++|++.|++.+..++.....+.+.. ++++|+++++++.....+|..+||.+++.
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSG----------TSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 655553 6789999999999999999988776544455443 56789999999999999999999999887
Q ss_pred HHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHH
Q 021342 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA 259 (314)
Q Consensus 180 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~ 259 (314)
+.... ++...|... ... .+.+..++.+.++++++++ +.++.+ +.+++|..+......+
T Consensus 153 l~~~~------~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~-------~~~~~~~~~~~~~~~~ 210 (381)
T PRK03633 153 VSTEL------MSVLPWVTG-LVL-AAILPLLFTRILNQQAENH-------DSTSIW-------PMLKLRQARLGVNGCI 210 (381)
T ss_pred ccccc------cchHHHHHH-HHH-HHHHHHHHhcccCCCCCCC-------CCCCHH-------HHHHhcchHHHHHHHH
Confidence 65432 112222221 111 1122222222221111100 111111 2345565555444444
Q ss_pred HHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 260 YSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 260 ~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
..++..+..++.+|.+..........+|....++++..+++++ ..+|+.|-
T Consensus 211 ~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr 261 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQW-PIGRLADR 261 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHH
Confidence 4444445555666755545556677888888888888888776 46776653
No 27
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.73 E-value=2.3e-16 Score=144.86 Aligned_cols=239 Identities=14% Similarity=0.115 Sum_probs=146.9
Q ss_pred hhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhc
Q 021342 52 TTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWV 130 (314)
Q Consensus 52 ~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~ 130 (314)
++.+.+...-....++..+...+++++.|+++||+|||++++++.++..+.... .+.++.+.++++|++.|++.+..++
T Consensus 25 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 104 (352)
T PF07690_consen 25 EELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSP 104 (352)
T ss_dssp CCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccc
Confidence 333433333334456777888999999999999999999999999988776333 3446666899999999999999999
Q ss_pred cchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH-
Q 021342 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL- 209 (314)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l- 209 (314)
+...++.++. ++++|++++++.....++|.++||++++.+.+.. +|++. |++..++.++..++
T Consensus 105 ~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-----~~~~~-~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 105 ASNALIADWF----------PPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-----GWRWA-FLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHCC----------CTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-----HHCCH-HHHHHHHHHHHHHHH
T ss_pred cccccccccc----------hhhhhhhccccccchhhhhhhcccchhhhhhhcc-----ccccc-cccccchhhhhhhhH
Confidence 9998999886 5689999999999999999999999999886443 47655 44444544444443
Q ss_pred HHhccCCccccccccccccccccchHHHHHHH-HHHhhcChhHHHHHHHHHHHhHHHhhhhccccccc-cccccc-cchh
Q 021342 210 MCFLRKEEDKGEKETADASVNFYSYLVSLSKS-ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI-VTPALG-VSGV 286 (314)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~-~~~~lg-~~~i 286 (314)
.+++++++++++++.++.+. +..++.+++ .....+++.++.+....+..++.........|.+. ....++ ..+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (352)
T PF07690_consen 169 ILFLPEPPPPRERESPKESE---SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQA 245 (352)
T ss_dssp HCCC---STTTT--SSTTTT-----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHH
T ss_pred hhhhhhcccccccccccccc---cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHH
Confidence 24454443332221111100 001111111 11233444444233333333333333444444331 122344 5678
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
+..+.+.++...+++. ..+++.|
T Consensus 246 ~~~~~~~~~~~~~~~~-~~~~l~~ 268 (352)
T PF07690_consen 246 GLLFSIFGIVGIIGSL-LAGRLSD 268 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHH
Confidence 8888888888877643 5555554
No 28
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.72 E-value=2.2e-15 Score=138.83 Aligned_cols=227 Identities=14% Similarity=0.029 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhch-----hhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP-----SWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~-----~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
..++..+...+++++.|+++||+|||++++.+.+...+..+. .+.+ +.+.+++.|++.|++.+..+++..+++.
T Consensus 39 ~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 118 (365)
T TIGR00900 39 AALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLP 118 (365)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677788888999999999999999999998776554433 2334 8888999999999999999988888888
Q ss_pred HhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
|+. ++++|++.++++.....+|.++||++++.+.+.. +|++.++ +..+..+++.++.+.+++++
T Consensus 119 ~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-----g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 182 (365)
T TIGR00900 119 DLV----------PEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-----GIKWAIW-VDAVGFAISALLIVSVRIPE 182 (365)
T ss_pred hcC----------CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHHHH-HHHHHHHHHHHHHHhccccc
Confidence 886 5689999999999999999999999998887654 4765543 33333344444444444332
Q ss_pred cccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHH-Hhhhhccccccccc-cccccchhhHHHHHHhh
Q 021342 218 DKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ-QAFVWAEFTKEIVT-PALGVSGVGGAMAVYGA 295 (314)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~-~~f~~~~~~~~~~~-~~lg~~~ig~~~~~~G~ 295 (314)
++++++++ . +++..++..+.....+++|..+.+....+..... .+.....+|.+... ..++..+.|......++
T Consensus 183 ~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (365)
T TIGR00900 183 LAASEIQA-L---SNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGL 258 (365)
T ss_pred CCCccccc-c---chhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHH
Confidence 22111100 0 0011111112223456777776665544433332 22222444433222 24567788888888888
Q ss_pred HhHHHHHHHHHHHHhh
Q 021342 296 FDAIFLVELLLRWLYF 311 (314)
Q Consensus 296 ~~~i~~~~~l~~~~~~ 311 (314)
...+++. ..+++.|.
T Consensus 259 ~~~~~~~-~~~~l~~~ 273 (365)
T TIGR00900 259 GALLGAL-LLGLLGRY 273 (365)
T ss_pred HHHHHHH-HHHHHHHH
Confidence 8877655 45566554
No 29
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.72 E-value=1.4e-15 Score=141.00 Aligned_cols=261 Identities=11% Similarity=0.046 Sum_probs=154.1
Q ss_pred hhhhhHHHHHHHHHHHhhHh-----hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHH
Q 021342 30 VHILSCAFLLIFLAYGAAQN-----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (314)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~-----l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~ 104 (314)
+....++++..+..+..... ++++.+.+........++..+.+.++++++++++||+|||+.++++.+...+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 34455555555555443332 3444554444444456788889999999999999999999999999988877655
Q ss_pred hh-hch-hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 105 AN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 105 ~~-~~~-~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
.. +.+ +++.+++.|++.|++.+. ++....+++++. ++++|+++++++....++|..+|+.++..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFF----------PKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhc----------CHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 54 667 888999999999999765 444556677765 56899999999998888888888877765544
Q ss_pred CC----C-CCCCCchhHHHHHHHHHHH-HHHHHHHhccCCccccccccccccc-cccchHHHHHHHHHHhhcChhHHHHH
Q 021342 183 DD----K-GGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDKGEKETADASV-NFYSYLVSLSKSITTLLADVRMLLII 255 (314)
Q Consensus 183 ~~----~-~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~lll~ 255 (314)
.. + ....+|++.+++...++.. +.++..++.+|.+++++++++.... .+....++..++..+.+++++.+.+.
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILA 231 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHH
Confidence 21 0 1123687765444333333 3333344455432221111100000 00000011122344567777766654
Q ss_pred HHHHH-HhHHHhhhhccccccccc-cccccchhhHHHHHHhhHhHHHHH
Q 021342 256 PLFAY-SGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 256 p~~~~-~g~~~~f~~~~~~~~~~~-~~lg~~~ig~~~~~~G~~~~i~~~ 302 (314)
..++. .+...+ ..+.+|.+... ..++..+.|....+.++.+.++..
T Consensus 232 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 279 (366)
T TIGR00886 232 LLYSVTFGSFLG-VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARP 279 (366)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhh
Confidence 33332 222222 23444533322 234567778777777777776553
No 30
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.72 E-value=3.9e-16 Score=144.42 Aligned_cols=244 Identities=11% Similarity=-0.006 Sum_probs=153.1
Q ss_pred hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhh
Q 021342 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (314)
Q Consensus 50 l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~ 128 (314)
++++.+.+........++..+...+++++.++++||+|||++++++.++..+..+.. +.++.+.+++.|++.|++.+..
T Consensus 21 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 100 (379)
T TIGR00881 21 LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMG 100 (379)
T ss_pred HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcccc
Confidence 334444443333344678888889999999999999999999999998887666554 6688899999999999999999
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHH-HHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-H
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN-LITLAVLKDDKGGSTSGTTLLFIVFLGVITL-G 206 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~-li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~ 206 (314)
++...+++.++. ++++|++.+++......+|..+|+ +++..+.... +|++. |++..++.++ +
T Consensus 101 ~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~ 164 (379)
T TIGR00881 101 WPPCGRTVTKWF----------SRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-----SWHWV-FIVPGIIAIIVS 164 (379)
T ss_pred CCchHHHHHHhc----------CHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-----CchhH-HHHHHHHHHHHH
Confidence 998888888886 668999999999999999999999 5666554432 57665 4333333333 3
Q ss_pred HHHHHhccCCccccc---ccc--ccc---cccccchHHHHH-HHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc
Q 021342 207 TILMCFLRKEEDKGE---KET--ADA---SVNFYSYLVSLS-KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 277 (314)
Q Consensus 207 ~~l~~~l~~~~~~~~---~~~--~~~---~~~~~~~~~~~~-~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~ 277 (314)
++..++++|+++.++ +++ .+. ..+++++.++.. ....+.+++|..+.+....+...........+.|.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (379)
T TIGR00881 165 LICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLT 244 (379)
T ss_pred HHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445665432211 000 000 000000000011 11234567777766554444333333333444554432
Q ss_pred c-cccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 278 T-PALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 278 ~-~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
. ..++..+.+..+.++++.+.+++. ..+++.+
T Consensus 245 ~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~ 277 (379)
T TIGR00881 245 QEKGFSKEKASWAFTLYELGGLVGTL-LAGWLSD 277 (379)
T ss_pred HHhCCCHHHHHHHHHHHHHHcchhHH-HHHHHHH
Confidence 2 345567788888888887777654 3444433
No 31
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.72 E-value=2.8e-15 Score=141.12 Aligned_cols=181 Identities=12% Similarity=0.088 Sum_probs=119.0
Q ss_pred CCccccCccccccchhhhhHHHHHHHHHHHhhH----hhhhhhcCCCChh-----HHHHHHHHHHHHHHHhhHHHHHHhh
Q 021342 16 DSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQ----NLETTVNTEGNLG-----TISLGILYTSFTCFSLVASLVVRVL 86 (314)
Q Consensus 16 ~~~~p~n~~~~~~~~~~l~~~~~~~~~~~~~~~----~l~~~i~~~~~~g-----~~~~~~~~~~~~~~~~~~~~l~~~~ 86 (314)
|.|+|.||++ ++..+.++.++...++.... .+.++.+.+.... ....++.++...+++++.|+++||+
T Consensus 5 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 81 (408)
T PRK09874 5 ENDTPINWKR---NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK 81 (408)
T ss_pred cCCCCCcHHH---HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3467778744 44444444444444433222 2233333332211 2235677788889999999999999
Q ss_pred chhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHH
Q 021342 87 GSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGM 165 (314)
Q Consensus 87 G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~ 165 (314)
|||++++.+.+.+.+..+.. ..++++.+++.|++.|++.+. .+....++.+.. ++++|+++++++...
T Consensus 82 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 150 (408)
T PRK09874 82 GRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGF-VPNANALIATQV----------PRNKSGWALGTLSTG 150 (408)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhc----------CHhhhhHHHHHHHHH
Confidence 99999999988876655543 567888999999999998664 344444455543 568899999999999
Q ss_pred HhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH-HHHhccCC
Q 021342 166 FASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKE 216 (314)
Q Consensus 166 ~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~ 216 (314)
...|..+||.+++.+.+.. +|++. |++..++.++..+ ..++++|+
T Consensus 151 ~~~g~~~~~~~~~~l~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 151 GVSGALLGPLAGGLLADSY-----GLRPV-FFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHh-----CHHHH-HHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999998876543 47654 4444444444433 33456654
No 32
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.72 E-value=3.1e-15 Score=142.75 Aligned_cols=223 Identities=11% Similarity=0.042 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhh--------hHHHHHHHHhhhhhhhhhccchhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSW--------YTMVPASLYLGFAASIIWVGEGTY 135 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~--------~~l~~~r~l~G~g~~~~~~~~~~~ 135 (314)
.+..|++..++++++|+++||+|||+++.++.+.+.+..+.. +.+++ ..+++.|+++|++.|..++...++
T Consensus 69 ~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~ 148 (432)
T PRK10406 69 FAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATY 148 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHH
Confidence 345566666999999999999999999999999998777664 55654 368899999999999999999999
Q ss_pred HhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC---CCCCCchhHHHHHHHHHHHHHHHHHHh
Q 021342 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 136 i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (314)
++|+. |+++||++.++.......|..+++++...+..... ....+||..++ +..+..++...+...
T Consensus 149 i~e~~----------p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~-i~~~~~ll~~~~~~~ 217 (432)
T PRK10406 149 MSEVA----------VEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFA-LGAVLAVVALWLRRQ 217 (432)
T ss_pred HHHhC----------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHH-HHHHHHHHHHHHHhc
Confidence 99986 67899999998887778888888776554432110 01236876543 333333333332233
Q ss_pred ccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHH-hHHHhhhhccccccccc-cccccchhhHHH
Q 021342 213 LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS-GLQQAFVWAEFTKEIVT-PALGVSGVGGAM 290 (314)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~-g~~~~f~~~~~~~~~~~-~~lg~~~ig~~~ 290 (314)
+||+++.++++ .++..+ ++ +.+++++.+.+....... .........++|.++.. ..+...+.+..+
T Consensus 218 ~~e~~~~~~~~-----~~~~~~----~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~ 285 (432)
T PRK10406 218 LDETSQQETRA-----LKEAGS----LK---GLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIM 285 (432)
T ss_pred CCCCchHHHhh-----hccccc----HH---HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 45543211110 001111 22 244566655544332221 22122233456655432 345566777777
Q ss_pred HHHhhHhHHHHHHHHHHHHhh
Q 021342 291 AVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 291 ~~~G~~~~i~~~~~l~~~~~~ 311 (314)
.+.++..++++. ..+++.|-
T Consensus 286 ~i~~~~~~i~~~-~~G~l~Dr 305 (432)
T PRK10406 286 TAALFVFMLIQP-LIGALSDK 305 (432)
T ss_pred HHHHHHHHHHHH-HHHHHHHH
Confidence 777777666655 44666654
No 33
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.71 E-value=4.1e-15 Score=139.73 Aligned_cols=233 Identities=11% Similarity=0.023 Sum_probs=149.9
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
.++.+.+........++..+...+++++.|.++||+|||+.+..+.+.+.+..... ..++...+++.|++.|++.+..+
T Consensus 30 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 109 (392)
T PRK10473 30 AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCY 109 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHH
Confidence 34444333333344567777888999999999999999999999998887655554 56788888899999999999888
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH-H
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-I 208 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 208 (314)
+...+++.+.. ++++|++..++.......|..+||++++.+.+.. +|++. |++..++.++.. +
T Consensus 110 ~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-----g~~~~-~~~~~~~~~i~~~~ 173 (392)
T PRK10473 110 VVAFAILRDTL----------DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-----PWQSL-FYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-----ChHHH-HHHHHHHHHHHHHH
Confidence 88777888775 5689999999999999999999999988776543 47654 334444444333 3
Q ss_pred HHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhh
Q 021342 209 LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVG 287 (314)
Q Consensus 209 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig 287 (314)
..+++||++++++++ +.+.. ++..+.+++++.+....................|..+. ...++..+.|
T Consensus 174 ~~~~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 242 (392)
T PRK10473 174 SLFILKETRPARAPA--------ASSKP---RENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYA 242 (392)
T ss_pred HHHHcCCCCCcccCC--------ccchH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHH
Confidence 345566654322111 01111 12224566766554332222111111112223332222 2345667788
Q ss_pred HHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 288 GAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 288 ~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
..+...++...+++. ..+++.|-
T Consensus 243 ~~~~~~~~~~i~~~~-~~~~l~~r 265 (392)
T PRK10473 243 IIMALTAGVSMTVSF-STPFALGI 265 (392)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHh
Confidence 888888988888764 55666553
No 34
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.71 E-value=3.9e-16 Score=150.42 Aligned_cols=232 Identities=9% Similarity=-0.125 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh------hchhhhHHHHHHHHhhhhhhhhhccchhhH
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN------LFPSWYTMVPASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~------~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i 136 (314)
...+.++..++++++++|+++||+|||+++.++.+..++..... ..++.+.+++.|++.|++.+..+++...++
T Consensus 68 ~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 147 (467)
T PRK09556 68 MIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTI 147 (467)
T ss_pred HHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 33567889999999999999999999999988887765543321 247899999999999999999999888888
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccC
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRK 215 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~ 215 (314)
+++. |+++||+++|++.....+|.++|+++...+..... ..+|+.. |.+..++.++ +++..+++++
T Consensus 148 ~~~~----------~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~--~~~~~~~-f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 148 TRWT----------PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF--DGHVIGM-FIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred HHHc----------CccceeeeEEeeecccchhhhHHHHHHHHHHHhhc--cCcchhH-HHHHHHHHHHHHHHHHHhCCC
Confidence 8886 67899999999999999999999988766554321 1136543 4433333333 3333444554
Q ss_pred Cccc-c--cccc--ccc---cc----cccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccc
Q 021342 216 EEDK-G--EKET--ADA---SV----NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALG 282 (314)
Q Consensus 216 ~~~~-~--~~~~--~~~---~~----~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg 282 (314)
++++ + +.++ ++. +. +++.+.++.+++ +.+++|.++.+....+...........+.|.++.. ..+.
T Consensus 215 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s 292 (467)
T PRK09556 215 SPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVE--YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFS 292 (467)
T ss_pred ChhhcCCCChhhcccCccchhhhccccccCcHHHHHHH--HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 3221 1 0000 000 00 001111111111 26788888776654443333222234556655432 3455
Q ss_pred cchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 283 VSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 283 ~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
..+.+..+.+..+...+++. ..+++.+
T Consensus 293 ~~~a~~~~~~~~~~~~ig~~-~~G~lsD 319 (467)
T PRK09556 293 KEDAINTFTLFEIGALVGSL-LWGWLSD 319 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 67777777777777666554 5555544
No 35
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.71 E-value=4e-15 Score=140.64 Aligned_cols=262 Identities=10% Similarity=0.051 Sum_probs=151.7
Q ss_pred ccccchhhhhHHHHHHHHHHHh----hHhhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGA----AQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~----~~~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~ 100 (314)
.+++++....++.++...+... ...+.++.+.+........+...+++.+++++++++.||+|||+++..+.+.+.
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 3455555555554433333221 112333444333333334567778889999999999999999999999998876
Q ss_pred HHHHhh----h-chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhh-HHHH
Q 021342 101 LFVAAN----L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ-FVGN 174 (314)
Q Consensus 101 ~~~~~~----~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~-~~G~ 174 (314)
+..+.. . .++++.++..|++.|++.+...+....++.+.. ++++|++++|++......|. .+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~----------~~~~~g~~~g~~~~~~~~g~~~~g~ 159 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNT----------KQDNLSSAVGWFWAVYSIGIGVFGS 159 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654322 2 357788888999999998876655555555554 56899999999999999997 6899
Q ss_pred HHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHH
Q 021342 175 LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL 253 (314)
Q Consensus 175 li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ll 253 (314)
++++.+.... +|+...|.. .....++.++. ++.++++++++++ + +++..+..+.....+++|+.+.
T Consensus 160 ~~~~~l~~~~-----g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~ 226 (402)
T TIGR00897 160 YYSSYAIPAF-----GEMNTLWSA-LAFVLTGGVIALFSNKDIFTPQHMQ-T------REKFSELGKAATILFTNPNVLL 226 (402)
T ss_pred HHHHhccccc-----chHHHHHHH-HHHHHHHHHHHHhccCCCCCccccc-C------CcchhhHHHHHHHHHcChhHHH
Confidence 9887765443 343332222 22222333333 3344432211111 0 0011111122234678888776
Q ss_pred HHHHHHHHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 254 IIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 254 l~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
.....+.......-...+.|.+.....++..+.+...+..++.+.+++. ..+++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~d 282 (402)
T TIGR00897 227 GGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNV-IFGIVGD 282 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 5544433322222223345533333345566677777777777777665 4456554
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.71 E-value=8.1e-16 Score=147.96 Aligned_cols=220 Identities=9% Similarity=-0.091 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h--chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
.+.++.++.++++++++++||+|||+++..+.++..+..+.. + ..+.+.+++.|++.|++.+..+++...++.++.
T Consensus 82 ~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~- 160 (465)
T TIGR00894 82 LSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWA- 160 (465)
T ss_pred HHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcC-
Confidence 567778888999999999999999999999998877655442 2 245778889999999999999999888898886
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCccc-
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDK- 219 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~- 219 (314)
|+++|+++++++....++|.++|+++++.+.... .+|++.+++ ..+.+++..++. .+.+|+++.
T Consensus 161 ---------~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~----~gw~~~f~i-~~~~~~~~~~~~~~~~~~~p~~~ 226 (465)
T TIGR00894 161 ---------PPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW----GGWPMIFYV-FGIVGCAWSLLWFVFPADDPSIH 226 (465)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCCeehhh-hhHHHHHHHHHHHHHhcCCcccC
Confidence 6689999999999999999999999988876542 148765443 344444333333 344443221
Q ss_pred cccccccc-------cc-cccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccccchhhHHH
Q 021342 220 GEKETADA-------SV-NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAM 290 (314)
Q Consensus 220 ~~~~~~~~-------~~-~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~~~ig~~~ 290 (314)
++.++++. +. +++.+.+. ...+.++++.++......+...........++|.++.. ..++..+.|+..
T Consensus 227 ~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~ 303 (465)
T TIGR00894 227 PCISKFEKKYINSSLQGQKGSTRQSL---PIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLS 303 (465)
T ss_pred CCCCHHHHHHHHhhcccccCCCCCCC---CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHH
Confidence 11100000 00 00000011 12346777777776665555444444555667766533 346677788877
Q ss_pred HHHhhHhHHHHH
Q 021342 291 AVYGAFDAIFLV 302 (314)
Q Consensus 291 ~~~G~~~~i~~~ 302 (314)
++..+...++..
T Consensus 304 ~~~~~~~~i~~~ 315 (465)
T TIGR00894 304 SLPYLFAWLCSI 315 (465)
T ss_pred HHHHHHHHHHHH
Confidence 777776666554
No 37
>TIGR00895 2A0115 benzoate transport.
Probab=99.71 E-value=2.4e-15 Score=140.25 Aligned_cols=139 Identities=13% Similarity=0.116 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
..++..+...+++++.++++||+|||+++..+.++..+..+. .+.++++.+++.|++.|++.+..++...+++.+..
T Consensus 57 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-- 134 (398)
T TIGR00895 57 LFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYA-- 134 (398)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHc--
Confidence 345666778888999999999999999999998877665554 36688888999999999999999888888888876
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
++++|++.++++.....+|..+|+.+++.+.+.. +|++.+++..+...+...+...++||+.
T Consensus 135 --------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 135 --------PKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-----GWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred --------CHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-----cceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 5689999999999999999999999988876553 4765433332233333444455677653
No 38
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.71 E-value=4.2e-15 Score=143.19 Aligned_cols=151 Identities=8% Similarity=0.021 Sum_probs=116.2
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
.++.+.+........+...++..++.++.++++||+|||++++.+.+.+.+..... ..+++..++++|++.|++.+...
T Consensus 29 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~ 108 (485)
T TIGR00711 29 AGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLI 108 (485)
T ss_pred HHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHH
Confidence 34444443333344677788889999999999999999999999999888766654 67899999999999999999998
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI- 208 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (314)
+...+++.++. |+++|+++++++.....+|..+||.+++.+.++. +|++.+++. ..+.++..+
T Consensus 109 ~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-----~w~~~f~~~-~~~~~~~~~~ 172 (485)
T TIGR00711 109 PLSFSTLLNIY----------PPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-----HWRWIFLIN-VPIGIIVVVV 172 (485)
T ss_pred HHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-----Cceehhhhh-hHHHHHHHHH
Confidence 88888888886 6689999999999999999999999998887654 587654443 333333333
Q ss_pred HHHhccCCc
Q 021342 209 LMCFLRKEE 217 (314)
Q Consensus 209 l~~~l~~~~ 217 (314)
..+++||++
T Consensus 173 ~~~~~~~~~ 181 (485)
T TIGR00711 173 AFFILPRDK 181 (485)
T ss_pred HHHHcCCcc
Confidence 334566543
No 39
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.70 E-value=9.2e-15 Score=137.46 Aligned_cols=232 Identities=12% Similarity=-0.004 Sum_probs=140.8
Q ss_pred hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhh
Q 021342 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (314)
Q Consensus 50 l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~ 128 (314)
+.++.+.+........++..+.+.+++++.|+++||+|||+++.++.+...+..... ..++...+++.|++.|++.+..
T Consensus 34 i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 113 (394)
T PRK11652 34 MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVG 113 (394)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHH
Confidence 334455454444455678888999999999999999999999999988877665554 6678889999999999998876
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHH-HHH
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVIT-LGT 207 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 207 (314)
.+....+..+.. ++++++++.+.+......+..+||.+++.+.+.. +|++.+++. .+..+ ...
T Consensus 114 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-----g~~~~f~~~-~~~~~~~~~ 177 (394)
T PRK11652 114 GVMARTLPRDLY----------EGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-----GWRACYLFL-LLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ChHHHHHHH-HHHHHHHHH
Confidence 555444555543 4578999999998899999999999988876543 587654433 33333 333
Q ss_pred HHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccccchh
Q 021342 208 ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGV 286 (314)
Q Consensus 208 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~~~i 286 (314)
+..+++||+++.+++ +++.++.+ .+.+++|+.+......+.............+..+.. ..++..+.
T Consensus 178 ~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 245 (394)
T PRK11652 178 SMARWMPETRPADAR---------RTRVLASY---RTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTV 245 (394)
T ss_pred HHHHhCCccCccccc---------hhHHHHHH---HHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHH
Confidence 334556664322111 11122222 235566665543322222211122222222322211 23445566
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
|+..++.+....+++. ..+|+.|
T Consensus 246 ~~~~~~~~~~~~~g~~-~~~~l~~ 268 (394)
T PRK11652 246 SILFILPIPAAFFGAW-FAGRPNK 268 (394)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHH
Confidence 7766666555555443 4445443
No 40
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.69 E-value=4.2e-15 Score=144.18 Aligned_cols=142 Identities=13% Similarity=0.059 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhH--------HHHHHHHhhhhhhhhhccchhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYT--------MVPASLYLGFAASIIWVGEGTY 135 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~--------l~~~r~l~G~g~~~~~~~~~~~ 135 (314)
.++.++++.+++++.|+++||+|||+++.++.+++++..+.. +.+++.+ +++.|+++|++.|..+++..++
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 477888999999999999999999999999999998877764 7787754 7899999999999999999999
Q ss_pred HhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC---CCCCCchhHHHHHHHHHHHHHHHHHHh
Q 021342 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 136 i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (314)
+++++ |+++||+..++......+|..+|+.+...+..... ....+||+.+++ .....+++.++...
T Consensus 143 ~~e~~----------p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i-~~~~~l~~~~~~~~ 211 (490)
T PRK10642 143 VAEYS----------PDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFI-ALPLGIIGLYLRHA 211 (490)
T ss_pred HHHhC----------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHH-HHHHHHHHHHHHHc
Confidence 99986 67899999999888888888888876654432110 012369866444 33444444444456
Q ss_pred ccCCc
Q 021342 213 LRKEE 217 (314)
Q Consensus 213 l~~~~ 217 (314)
+||++
T Consensus 212 ~~esp 216 (490)
T PRK10642 212 LEETP 216 (490)
T ss_pred CCCCh
Confidence 77754
No 41
>PRK03699 putative transporter; Provisional
Probab=99.69 E-value=1.1e-14 Score=137.15 Aligned_cols=257 Identities=13% Similarity=-0.027 Sum_probs=154.1
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHh----hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQN----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~----l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~ 100 (314)
+++|-.+...+++++.......... +.++.+.+........+..++++.+++++++++.||+|||+++..+.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3444455544444433333333333 333344333222334567788899999999999999999999999998877
Q ss_pred HHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHH
Q 021342 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (314)
Q Consensus 101 ~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~ 179 (314)
+..+.. +.++.+.+++.|++.|++.+..++....++++.. |+++|+++++........|..++|.+.+.
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 153 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVY----------EGKQRGSRLLFTDSFFSMAGMIFPIIAAY 153 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhc----------ccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665543 6688889999999999999988877777777765 56789999998888888999999988777
Q ss_pred HHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHH
Q 021342 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA 259 (314)
Q Consensus 180 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~ 259 (314)
+.... .+||+.++ +..+..++..++.++.+.|+.++++++ ++++. . +...+++.+.+....+
T Consensus 154 l~~~~----~gw~~~f~-~~~~~~~~~~~~~~~~~~p~~~~~~~~-----~~~~~----~----~~~~~~~~~~~~~~~~ 215 (394)
T PRK03699 154 LLARS----IEWYWVYA-CIGLVYVAIFILTLFSEFPALGKHAPK-----ADKPV----A----KEKWGIGVLFLAIAAL 215 (394)
T ss_pred HHhcc----ccHHHHHH-HHHHHHHHHHHHHHhcCCccccccCcc-----ccCcc----c----cccCChHHHHHHHHHH
Confidence 65432 25876543 333333333333333332321111110 00000 0 1112344443333332
Q ss_pred HHhHHHhhhhccccccccc-cccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 260 YSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 260 ~~g~~~~f~~~~~~~~~~~-~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
.......-..++.|.+... ..++..+.|....++.+..+++.+ +.+++.|
T Consensus 216 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~d 266 (394)
T PRK03699 216 LYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMW-IFSFIVR 266 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHH-HHHHHHH
Confidence 2222222334566755533 356677888888888887777654 4555544
No 42
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.69 E-value=1.1e-14 Score=137.53 Aligned_cols=222 Identities=11% Similarity=-0.013 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
...+...+.++++.+++|+++||+|||++++.+.+++.+..+.. +.++. +..|+++|++.+..+++..+++.++.
T Consensus 42 ~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~- 117 (393)
T PRK11195 42 LLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELL- 117 (393)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 33567778899999999999999999999999999887655443 33443 67899999999999999999999987
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccc
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGE 221 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 221 (314)
|+++|++++++.....+.|.++||.+++.+.... |+.. +.+...+.+++.+..+.+||++.+++
T Consensus 118 ---------~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~------~~~~-~~i~~~~~~~~~~~~~~l~~~~~~~~ 181 (393)
T PRK11195 118 ---------PGEKLVKANGWMEGSTIAAILLGTVLGGALADPH------AEAA-LAVCALIYLLAALFNLFIPRLGARRP 181 (393)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHH-HHHHHHHHHHHHHHHhcCCCCccccc
Confidence 6789999999999999999999999999886531 3332 22223322334444456776543221
Q ss_pred cccccccccccchHHHHHH-HHHHhhcChhHHHHHHHH-HHHhHHHhhhhcccccccc-ccccccchhhHHHHHHhhHhH
Q 021342 222 KETADASVNFYSYLVSLSK-SITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDA 298 (314)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~lll~p~~-~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~~G~~~~ 298 (314)
+.+. + .....++++ .....+++|......... +.........+ .+|.+.. ....+..+.|+.++..++...
T Consensus 182 ~~~~----~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lg~s~~~~G~~~~~~~~g~i 255 (393)
T PRK11195 182 GQSW----N-PIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRF-LVLAWAPVALGITLNQPAYLQAVVAIGIA 255 (393)
T ss_pred ccCC----C-HHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCChhHHHHHHHHHHHHHH
Confidence 1100 0 001111111 122345666654433221 11111112211 1121110 124557788999999999888
Q ss_pred HHHHHHHHHHHhh
Q 021342 299 IFLVELLLRWLYF 311 (314)
Q Consensus 299 i~~~~~l~~~~~~ 311 (314)
+++. ..+|+.|.
T Consensus 256 ~g~~-~~~~l~~~ 267 (393)
T PRK11195 256 VGAG-AAARLVTL 267 (393)
T ss_pred HHHH-HHHHHhcC
Confidence 8766 55777653
No 43
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.68 E-value=1.9e-15 Score=144.01 Aligned_cols=140 Identities=15% Similarity=0.072 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc---hhhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF---PSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
....++.+++..++++++++++||+|||++++++.+++.+..+.. +. .+++.+++.|++.|++.+..++....+++
T Consensus 74 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 153 (481)
T TIGR00879 74 GLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLS 153 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHH
Confidence 344678889999999999999999999999999998876654443 22 23447889999999999999888888888
Q ss_pred HhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHH---HHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 021342 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT---LAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (314)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 214 (314)
++. ++++|+++++++.....+|..+|++++ ..... ..+||+.++ +.....++.++..+++|
T Consensus 154 ~~~----------~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-----~~~w~~~f~-~~~~~~~~~~~~~~~l~ 217 (481)
T TIGR00879 154 EIA----------PKALRGALTSLYQLAITFGILVAYGFGSGKVSLNN-----TLGWRIPLG-LQLIPAGLLFLGLFFLP 217 (481)
T ss_pred ccC----------ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC-----CccHHHHHH-HHHHHHHHHHHHHhcCC
Confidence 876 678999999999999999999999988 33222 236876543 44444455555556777
Q ss_pred CCc
Q 021342 215 KEE 217 (314)
Q Consensus 215 ~~~ 217 (314)
|++
T Consensus 218 ~~~ 220 (481)
T TIGR00879 218 ESP 220 (481)
T ss_pred CCh
Confidence 753
No 44
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.68 E-value=8.9e-15 Score=140.44 Aligned_cols=229 Identities=10% Similarity=-0.036 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc----hhhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF----PSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~----~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
...+...+.+++++++.|+++||+|||++++++.+++.+..+.. +. .+...+++.|++.|++.+..++.....+.
T Consensus 67 ~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~ 146 (452)
T PRK11273 67 FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMV 146 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 34677888899999999999999999999999998876655443 32 36777888999999999988776666666
Q ss_pred HhhhhhhhhcCCCCccchhhHHHHHHHHHhhhh-HHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccC
Q 021342 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ-FVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRK 215 (314)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~-~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~ 215 (314)
+++ ++++|+++++++.....+|. ..||+++..+... .+|++.+++ ..++.++ +++..+++||
T Consensus 147 ~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~gw~~~f~i-~~~~~~~~~~l~~~~~~~ 210 (452)
T PRK11273 147 HWW----------SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-----NDWHAALYM-PAFAAILVALFAFAMMRD 210 (452)
T ss_pred HhC----------ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-----ccHHHHHHH-HHHHHHHHHHHHHHHccC
Confidence 665 56889999999988888886 4566654433322 158765443 3343333 4445566777
Q ss_pred Ccccc----ccc-cc---cc-cc--cccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-ccccc
Q 021342 216 EEDKG----EKE-TA---DA-SV--NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGV 283 (314)
Q Consensus 216 ~~~~~----~~~-~~---~~-~~--~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~ 283 (314)
+++.. +++ .+ +. +. .++.+.++.+++ ..++++..+.+....+...........++|.++.. ..++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~ 288 (452)
T PRK11273 211 TPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQ--YVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL 288 (452)
T ss_pred CHhhcCCCChhhhhhccccccccccCCCccHHHHHHH--HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 54321 000 00 00 00 011112222211 35678877765544433333333345567766544 34667
Q ss_pred chhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 284 SGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 284 ~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
...+..+.++++...++.. +.+++.+
T Consensus 289 ~~~~~~~~~~~~~~~~g~~-~~G~l~d 314 (452)
T PRK11273 289 DKSSWAYFLYEYAGIPGTL-LCGWMSD 314 (452)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 7788777777777766544 4555553
No 45
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.68 E-value=1.1e-14 Score=140.01 Aligned_cols=235 Identities=9% Similarity=-0.041 Sum_probs=145.4
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHH-HHHHhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVP-ASLYLGFAASII 128 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~-~r~l~G~g~~~~ 128 (314)
+++.+.+........++.+....++.++.|+++||+|||++++.+.+...+..+.. +.++.+.++. .|++.|++.+..
T Consensus 46 ~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~ 125 (455)
T TIGR00892 46 QQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFN 125 (455)
T ss_pred HHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhh
Confidence 34444443333344567777788889999999999999999999988776655543 6677777754 578999999977
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
++....++.++. +++|+++.++......+|..+||.+++.+.... +||+.++ +..++.+++.+
T Consensus 126 ~~~~~~~~~~~~-----------~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-----gwr~~f~-~~~~~~~~~~v 188 (455)
T TIGR00892 126 FQPSLTMLGKYF-----------YRRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-----GWRGSFL-ILGGLLLHCCV 188 (455)
T ss_pred hhHHHHHHHHHH-----------HhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-----ChHHHHH-HHHHHHHHHHH
Confidence 666556666653 378999999999999999999999988876653 5876544 44444444433
Q ss_pred HHHhc-cCCccc---ccc--ccccc--cccc--cchHHHHHHHH--HHhhcChhHHHHHHHHHHHhHHHhhhhccccccc
Q 021342 209 LMCFL-RKEEDK---GEK--ETADA--SVNF--YSYLVSLSKSI--TTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI 276 (314)
Q Consensus 209 l~~~l-~~~~~~---~~~--~~~~~--~~~~--~~~~~~~~~~~--~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~ 276 (314)
..+++ +++..+ +++ ++.+. ..++ ..+..++.++. .+.+++|+++......+...+.......++|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 268 (455)
T TIGR00892 189 CGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYA 268 (455)
T ss_pred HHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 33333 322110 110 00000 0000 00111112221 2567888777665544444433333334455444
Q ss_pred cccccccchhhHHHHHHhhHhHHHHH
Q 021342 277 VTPALGVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 277 ~~~~lg~~~ig~~~~~~G~~~~i~~~ 302 (314)
....++..+.|+.+.+.|+.+.+++.
T Consensus 269 ~~~g~s~~~~g~~~~~~~~~~~~~~~ 294 (455)
T TIGR00892 269 KDKGVDEYEAAFLLSIIGFVDIFARP 294 (455)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44456778888898888888887653
No 46
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.67 E-value=3e-14 Score=138.34 Aligned_cols=268 Identities=13% Similarity=0.063 Sum_probs=158.1
Q ss_pred cccCccccccchhhhhHHHHHHHHHHHhhHhhhhhhcC-CCChhHHHH-HHHHHHHHHHHhhHHHHHHhh-----chhhH
Q 021342 19 QVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISL-GILYTSFTCFSLVASLVVRVL-----GSKNA 91 (314)
Q Consensus 19 ~p~n~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~-~~~~g~~~~-~~~~~~~~~~~~~~~~l~~~~-----G~k~~ 91 (314)
+|+||++++|...++.+++..-...+.....+..-..+ +.+...++. +.....+ +++++++|++||+ |||+.
T Consensus 4 ~~l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 4 QYLRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred hHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 48899988888777777665554444333322222211 122222322 1222223 6889999999999 99886
Q ss_pred -HHHHHHHHHHHHHh--hh--chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHH
Q 021342 92 -LILGTTGYWLFVAA--NL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF 166 (314)
Q Consensus 92 -l~~g~~~~~~~~~~--~~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~ 166 (314)
+..+.+...+.... +. ..+.+.+.+.+++.|++.+...+...++.+++. +++||+++.++.....
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~----------~~~~rg~~~~i~~~g~ 152 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVL----------PAEERGAGAAISVLGY 152 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ChhhhHHHHHHHHHHH
Confidence 55666666544333 22 246777888999999999988878778888876 6689999999999999
Q ss_pred hhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccccccchHHHHHHHHHHhh
Q 021342 167 ASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLL 246 (314)
Q Consensus 167 ~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (314)
.+|.++|+.++..+.++. .+||..++ +..++.++..+..+++||+++.++++ + +.+++..+.++ +.+
T Consensus 153 ~lG~llg~~l~~~l~~~~----~GWr~~f~-i~a~l~ll~~l~~~~~~e~~~~~~~~--~---~~~~~~~~~l~---~~~ 219 (491)
T PRK11010 153 RLAMLVSGGLALWLADRY----LGWQGMYW-LMAALLIPCIIATLLAPEPTDTIPVP--K---TLEQAVVAPLR---DFF 219 (491)
T ss_pred HHHHHHHHHHHHHHHhcc----cCHHHHHH-HHHHHHHHHHHHHHhcCCCccccccc--c---chhhhHHHHHH---HHH
Confidence 999999999988876532 25876544 44445555555555677764321110 0 00111122233 345
Q ss_pred cChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 247 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 247 ~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
++++.+......+...+...+...+.+.++. ...++.+++|+.....|....+......+++.+
T Consensus 220 ~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~d 284 (491)
T PRK11010 220 GRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQ 284 (491)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5565554443333333444444455554433 245667888887765664333333334444443
No 47
>PRK11043 putative transporter; Provisional
Probab=99.67 E-value=4.5e-14 Score=133.11 Aligned_cols=222 Identities=10% Similarity=-0.006 Sum_probs=138.1
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
+++.+.+........++..+.+.++++++++++||+|||+++..+.+...+.... .+.++++.+++.|++.|++.+...
T Consensus 33 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 112 (401)
T PRK11043 33 QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAA 112 (401)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHH
Confidence 3444443333334467888889999999999999999999999998877665544 366888899999999999988766
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (314)
+...+++.+.. +++++++..+..+....++..+||++++.+.... +|++.++ +..++.++..+.
T Consensus 113 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-----g~~~~~~-~~~~~~~~~~~~ 176 (401)
T PRK11043 113 VIWQALVIDRY----------PAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-----GWQAIFA-TLFAITLLLILP 176 (401)
T ss_pred HHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ChHHHHH-HHHHHHHHHHHH
Confidence 65555566554 5577888888888888999999999998887653 5865443 334444444444
Q ss_pred HHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhhHH
Q 021342 210 MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGA 289 (314)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~ 289 (314)
.++++|++++++++ +.++ +..+.+++++.+.....+.........+....|.......++..+.|+.
T Consensus 177 ~~~~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~ 243 (401)
T PRK11043 177 TLRLKPSKKARKQS----------QDAL---TFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLS 243 (401)
T ss_pred HHHcCCCCCccccc----------hHHH---HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHH
Confidence 44555433211110 0111 2234566666554332222221111112334443333334556677777
Q ss_pred HHHHhhHhHHHH
Q 021342 290 MAVYGAFDAIFL 301 (314)
Q Consensus 290 ~~~~G~~~~i~~ 301 (314)
++..++...++.
T Consensus 244 ~~~~~~~~~~g~ 255 (401)
T PRK11043 244 YVPQTIAFLVGG 255 (401)
T ss_pred HHHHHHHHHHHH
Confidence 666666555544
No 48
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.66 E-value=5.6e-15 Score=147.27 Aligned_cols=236 Identities=15% Similarity=0.039 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hch----------------------------------
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP---------------------------------- 109 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~---------------------------------- 109 (314)
.+...++++++.++.+.+.||+|||+.+.+|.+++++..+.+ +.+
T Consensus 74 ~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 153 (633)
T TIGR00805 74 NGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQAL 153 (633)
T ss_pred eehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCc
Confidence 568888999999999999999999999999998887655433 211
Q ss_pred -----------------hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHH
Q 021342 110 -----------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFV 172 (314)
Q Consensus 110 -----------------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 172 (314)
.+..++++|+++|+|.++.++...+|++|+. ++++|+++++++.....+|..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~----------~~~~~~~~~~i~~~~~~iG~~l 223 (633)
T TIGR00805 154 RPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFA----------KSKNSPLYIGILESIAVFGPAF 223 (633)
T ss_pred cccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccC----------CccccHHHHHHHHHHHHhhhHH
Confidence 2446778999999999999999999999986 6789999999999999999999
Q ss_pred HHHHHHHHHcCCCC-----------CCCCchh-----HHHHHHHHHHHHHHHHHHhccCCcccc----c-ccc-ccc-cc
Q 021342 173 GNLITLAVLKDDKG-----------GSTSGTT-----LLFIVFLGVITLGTILMCFLRKEEDKG----E-KET-ADA-SV 229 (314)
Q Consensus 173 G~li~~~i~~~~~~-----------~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~----~-~~~-~~~-~~ 229 (314)
|+++++.+.+...+ ...+||| ..|++..++.++..+.++++|++.+++ + +.. ++. ..
T Consensus 224 G~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~ 303 (633)
T TIGR00805 224 GYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEK 303 (633)
T ss_pred HHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccc
Confidence 99999888753210 0112332 223333444444333445555532211 0 000 000 00
Q ss_pred --cc-----cchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccccchhhHHHHHHhhHhHHHH
Q 021342 230 --NF-----YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAIFL 301 (314)
Q Consensus 230 --~~-----~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~~~ig~~~~~~G~~~~i~~ 301 (314)
++ ....++..+...+++++|.++......+...........++|+++.. ..+..++.|+.++..++...+..
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG 383 (633)
T TIGR00805 304 SEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLG 383 (633)
T ss_pred cccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHH
Confidence 00 01122223445568899988777655444433333445567766642 45667788887777666444434
Q ss_pred HHHHHHHHh
Q 021342 302 VELLLRWLY 310 (314)
Q Consensus 302 ~~~l~~~~~ 310 (314)
..+-++++|
T Consensus 384 ~~l~G~l~~ 392 (633)
T TIGR00805 384 YLIGGFIMK 392 (633)
T ss_pred Hhhhhheee
Confidence 445555554
No 49
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.66 E-value=4.6e-14 Score=133.48 Aligned_cols=214 Identities=12% Similarity=0.036 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.++..+...+.++++|+++||+|||++++.+.+...+..+.. ..++++.+++.|++.|++.+..+++..+++.+..
T Consensus 52 ~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~--- 128 (400)
T PRK11646 52 LGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLI--- 128 (400)
T ss_pred HHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 344455556667889999999999999999999887766654 5678888899999999999988887777777765
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH-HHHHHhccCCcccccc
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG-TILMCFLRKEEDKGEK 222 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~ 222 (314)
++++|++++++.....++|..+||.+++.+. +. +|++.+++ ..+..++. ++..+++||++.+++
T Consensus 129 -------~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-----g~~~~f~~-~~~~~~~~~i~~~~~~~~~~~~~~- 193 (400)
T PRK11646 129 -------RPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-----DFRLVCAT-GAVLFVLAAAFNAWLLPAYKLSTV- 193 (400)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-----hHHHHHHH-HHHHHHHHHHHHHHhCCccccccc-
Confidence 6689999999999999999999999998887 32 47655443 33333333 333344554321110
Q ss_pred ccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHHHHH
Q 021342 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~ 302 (314)
+++.++.+ .+.+++|+.+.....++............+|.+......+...+|+..++.++.....+.
T Consensus 194 ---------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 261 (400)
T PRK11646 194 ---------RTPVREGM---TRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLY 261 (400)
T ss_pred ---------chhhHHHH---HHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHH
Confidence 01112222 245677776554332222111111123345543333334567778777777766655443
Q ss_pred HHHHHHH
Q 021342 303 ELLLRWL 309 (314)
Q Consensus 303 ~~l~~~~ 309 (314)
.++|+.
T Consensus 262 -~~~~~~ 267 (400)
T PRK11646 262 -PIARWS 267 (400)
T ss_pred -HHHHHH
Confidence 334443
No 50
>PRK10054 putative transporter; Provisional
Probab=99.66 E-value=1.7e-14 Score=136.25 Aligned_cols=256 Identities=14% Similarity=0.061 Sum_probs=153.4
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhh-----hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNL-----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l-----~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~ 99 (314)
+.+|++..+.++.++...++...... +++.+.+...-....++..+...+++++.|.++||+|||++++++.+..
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~ 83 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAF 83 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHH
Confidence 34566777767666666554443322 2333322222223345666778888899999999999999999999877
Q ss_pred HHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHH
Q 021342 100 WLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (314)
Q Consensus 100 ~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~ 178 (314)
.+..+.. +.++++.++..|.+.|.+.+...+...++..|.. ++++|++.+++.....++|..+||.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~lg~~igp~l~~ 153 (395)
T PRK10054 84 ASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNL----------SSTSKTKIFSLNYTMLNIGWTVGPPLGT 153 (395)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654443 6678888888888888877766655555555553 5678999999999999999999999998
Q ss_pred HHHcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHH
Q 021342 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL 257 (314)
Q Consensus 179 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~ 257 (314)
.+.. . +|+..++ ...++.++++++ .+++++++++++++ ++ +. ++..+.+++|+.+.....
T Consensus 154 ~l~~-~-----g~~~~f~-~~~~~~~i~~i~~~~~~~~~~~~~~~~-------~~-~~----~~~~~~~~~~~~~~~~~~ 214 (395)
T PRK10054 154 LLVM-Q-----SINLPFW-LAAICSAFPLVFIQIWVQRSEKAIATE-------TG-SV----WSPSVLLQDKALLWFTCS 214 (395)
T ss_pred HHHH-h-----ccCcHHH-HHHHHHHHHHHHHHHHHhccccccccc-------hh-hh----hhhhhhccCceehHHHHH
Confidence 8764 2 4765544 444444444433 34455543221111 00 11 111345677877665544
Q ss_pred HHHHhHHHhhhhccccccc---cccccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 258 FAYSGLQQAFVWAEFTKEI---VTPALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 258 ~~~~g~~~~f~~~~~~~~~---~~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
.+...+..+...+.++.+. .....+...+|..+.+.++.....+ ...+|+.+
T Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~ 269 (395)
T PRK10054 215 GFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLN 269 (395)
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh-hHHHHHHc
Confidence 3333322222222222221 1223445566667777766555544 35566654
No 51
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.65 E-value=5.4e-14 Score=132.98 Aligned_cols=151 Identities=14% Similarity=0.095 Sum_probs=122.0
Q ss_pred hhhhcCCCCh-hHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhh
Q 021342 51 ETTVNTEGNL-GTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (314)
Q Consensus 51 ~~~i~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~ 128 (314)
..+.|.+... -....+++..+|++++++++.++||+|.|+++.++.+.+.+..+.. +..+...+.+.|++.|+++|+.
T Consensus 53 ~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~ 132 (511)
T TIGR00806 53 LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAAR 132 (511)
T ss_pred HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444333 3344788999999999999999999999999999999998877775 7778999999999999999999
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhH--HHHHHHHHHHHH
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL--LFIVFLGVITLG 206 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~ 206 (314)
+ +...++..+. |++||+++.|++.++..+|.++|++++..+. .. +|++. +..+..+..+++
T Consensus 133 ~-A~~syI~~Wf----------P~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~-----gWr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 133 I-AYSSYIFSLV----------PPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TL-----GWISYSTLNIISLVFMTFS 195 (511)
T ss_pred H-HHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-----CchhHHHHHHHHHHHHHHH
Confidence 9 8888888887 7799999999999999999999999988844 32 47653 223344555677
Q ss_pred HHHHHhccCCcc
Q 021342 207 TILMCFLRKEED 218 (314)
Q Consensus 207 ~~l~~~l~~~~~ 218 (314)
.++.+++|.+++
T Consensus 196 ~~~a~~LP~~~~ 207 (511)
T TIGR00806 196 VFLALFLKRPKR 207 (511)
T ss_pred HHHHHhCCCCch
Confidence 788899997654
No 52
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.65 E-value=3.6e-14 Score=136.71 Aligned_cols=144 Identities=9% Similarity=0.045 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h------------chhhhHHHHHHHHhhhhhhhhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L------------FPSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~------------~~~~~~l~~~r~l~G~g~~~~~ 129 (314)
...++..++..++++++|+++||+|||++++++.+.+.+..+.. + ++++..++++|+++|++.|..+
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 138 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS 138 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence 44678888999999999999999999999999998887654432 2 1235677899999999999999
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC---CCCCCchhHHHHHHHHHHHHH
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLG 206 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~ 206 (314)
+...++++|+. |+++||+++++......+|..+++++++.+..... ....+||+. |++..+..++.
T Consensus 139 ~~~~~~i~e~~----------~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~-f~~~~~~~~~~ 207 (479)
T PRK10077 139 MLSPMYIAEIA----------PAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYM-FASEAIPALLF 207 (479)
T ss_pred hHHHHHHHhhC----------ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHH-HHHHHHHHHHH
Confidence 99999999987 67899999999999999999999888776653211 112468765 44444555555
Q ss_pred HHHHHhccCCc
Q 021342 207 TILMCFLRKEE 217 (314)
Q Consensus 207 ~~l~~~l~~~~ 217 (314)
.+..+++||++
T Consensus 208 ~~~~~~l~~s~ 218 (479)
T PRK10077 208 LMLLYFVPETP 218 (479)
T ss_pred HHHHHcCCCCc
Confidence 55566788864
No 53
>PRK12382 putative transporter; Provisional
Probab=99.65 E-value=5.8e-14 Score=131.94 Aligned_cols=153 Identities=16% Similarity=0.102 Sum_probs=111.7
Q ss_pred CccccccchhhhhHHHHHHHHHHHhhHh-----hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHH
Q 021342 22 TPKNYTRDVHILSCAFLLIFLAYGAAQN-----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGT 96 (314)
Q Consensus 22 n~~~~~~~~~~l~~~~~~~~~~~~~~~~-----l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~ 96 (314)
..+++.+.+..+.++.++.+.+...... ++++++.+...-....++..+...++++++|+++||+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~ 88 (392)
T PRK12382 9 TRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGM 88 (392)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHH
Confidence 4455566666666665555554333222 23445544433334467888899999999999999999999999988
Q ss_pred HHHHHHHHhh---------hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHh
Q 021342 97 TGYWLFVAAN---------LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (314)
Q Consensus 97 ~~~~~~~~~~---------~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 167 (314)
+...+..+.+ ..++++.++++|+++|++.+..+++..+++.+.. ++++|+++++++.....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~a~~~~~~~~~ 158 (392)
T PRK12382 89 LACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLV----------GPKHSGKVMSWNGMAMY 158 (392)
T ss_pred HHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----------CccccchhhhHHHHHHH
Confidence 7765432211 1257788899999999999988877777777664 67899999999999999
Q ss_pred hhhHHHHHHHHHHHcCC
Q 021342 168 SHQFVGNLITLAVLKDD 184 (314)
Q Consensus 168 ~g~~~G~li~~~i~~~~ 184 (314)
.|..+||.+++.+....
T Consensus 159 ~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 159 GALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999988876543
No 54
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.64 E-value=3.4e-14 Score=135.81 Aligned_cols=236 Identities=9% Similarity=-0.061 Sum_probs=144.9
Q ss_pred cCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc----hhhhHHHHHHHHhhhhhhhhh
Q 021342 55 NTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF----PSWYTMVPASLYLGFAASIIW 129 (314)
Q Consensus 55 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~----~~~~~l~~~r~l~G~g~~~~~ 129 (314)
+.+........++.+++..+++++.++++||+|||+.++++.+.+.+..... .. ++...+++.|++.|++.+..+
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~ 136 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGW 136 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcch
Confidence 4333333344678888899999999999999999999999887776654432 22 456677889999999999888
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-HHH
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTI 208 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 208 (314)
+.....+.++. |+++||++++++....++|..+++.+.+...... .+||+. |++..++.++ .++
T Consensus 137 ~~~~~~i~~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~~w~~~-f~~~~~~~~i~~~~ 201 (438)
T TIGR00712 137 PPCGRTMVHWW----------SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF----NDWHAA-LYFPAICAIIVALF 201 (438)
T ss_pred HHHHHHHHHhc----------CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh----hhhHHH-HHHHHHHHHHHHHH
Confidence 87777777765 6789999999999999999999887765443321 258765 4443444443 444
Q ss_pred HHHhccCCcccc---c--ccccc---c--cc-cccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc
Q 021342 209 LMCFLRKEEDKG---E--KETAD---A--SV-NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 277 (314)
Q Consensus 209 l~~~l~~~~~~~---~--~~~~~---~--~~-~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~ 277 (314)
..+++||+++.. + +.+.+ . +. +++.+.++.+++ +.+++++++......+...........++|.++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 279 (438)
T TIGR00712 202 AFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQ--YVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLK 279 (438)
T ss_pred HHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHH--HHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 556677653221 0 00000 0 00 001111221111 3567887777654433322222222345564443
Q ss_pred c-cccccchhhHHHHHHhhHhHHHHHHHHHHH
Q 021342 278 T-PALGVSGVGGAMAVYGAFDAIFLVELLLRW 308 (314)
Q Consensus 278 ~-~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~ 308 (314)
. ..+...+.+..+..+++.+++++. ..+++
T Consensus 280 ~~~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l 310 (438)
T TIGR00712 280 EVKHFALDKSSWAYFLYEYAGIPGTL-LCGWM 310 (438)
T ss_pred HccCCChhhHHHHHHHHHHHHHHHHH-HHHHH
Confidence 3 345667778877778777777554 33433
No 55
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.64 E-value=2.2e-14 Score=136.04 Aligned_cols=220 Identities=11% Similarity=-0.074 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-----h-hchhhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-----N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-----~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
.+...+...+++++.|+++||+|||+++..+.+..++..+. . ..++++.+++.|++.|++.+...++..+++.+
T Consensus 58 ~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 137 (417)
T PRK10489 58 VTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPA 137 (417)
T ss_pred HHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 56677788888899999999999999998887665443221 1 14567788889999999988877766666666
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
.. ++++|+++.++.....++|..+||.+++.+.... +|++. |....+..+++.++.+.+|++++
T Consensus 138 ~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-----~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 201 (417)
T PRK10489 138 LV----------GRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-----GVAWN-YGLAAAGTFITLLPLLRLPALPP 201 (417)
T ss_pred cc----------CHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-----hhHHH-HHHHHHHHHHHHHHHHhCCCCCC
Confidence 64 5688999999999999999999999998876543 36554 44444444444455556666432
Q ss_pred ccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccccchhhHHHHHHhhHh
Q 021342 219 KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFD 297 (314)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~~~ig~~~~~~G~~~ 297 (314)
++++++ ++.++.++.+ ...+++|.+.......+......+ ...++|.+... ..++....|+.+..+++..
T Consensus 202 ~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~ 272 (417)
T PRK10489 202 PPQPRE-----HPLRSLLAGF---RFLLASPVVGGIALLGGLLTMASA-VRVLYPALADEVWQMGAAQIGLLYAAVPLGA 272 (417)
T ss_pred CCcccc-----cchHHHHHHH---HHHHcChHHHHHHHHHHHHHHHHh-HHHhhHHHHHhccCCChhHhHHHHHHHHHHH
Confidence 211110 0111222222 234566665544332222222222 23345543332 3456778899888888888
Q ss_pred HHHHHHHHHHHHh
Q 021342 298 AIFLVELLLRWLY 310 (314)
Q Consensus 298 ~i~~~~~l~~~~~ 310 (314)
.+++. ..+|+.|
T Consensus 273 ~ig~~-~~~~l~~ 284 (417)
T PRK10489 273 ALGAL-TSGWLAH 284 (417)
T ss_pred HHHHH-HHHHhhh
Confidence 87665 3455443
No 56
>PRK10504 putative transporter; Provisional
Probab=99.63 E-value=8.9e-14 Score=133.88 Aligned_cols=173 Identities=9% Similarity=0.016 Sum_probs=120.7
Q ss_pred ccchhhhhHHHHHHHHHHHhhHh----hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHH
Q 021342 27 TRDVHILSCAFLLIFLAYGAAQN----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (314)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~----l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~ 102 (314)
.++++.+.+++++.......... +.++.+.+........+...+..+++++++++++||+|||++++.+.+.+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 33555666665554443333232 23334433322223356667778889999999999999999999988877665
Q ss_pred HHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 103 ~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
.+.. +.++...+++.|++.|++.+..++...+++.+.. ++++|++..+.+....++|..+||.+++.+.
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIV----------PREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 5543 6678888999999999999998888777777765 5688999999999999999999999998887
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccC
Q 021342 182 KDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRK 215 (314)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~ 215 (314)
++. +|++.+++ ......++.++. ...|+
T Consensus 159 ~~~-----gw~~~f~~-~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 159 EYA-----SWHWIFLI-NIPVGIIGAIATLMLMPN 187 (471)
T ss_pred hhc-----cHHHHHHH-HHHHHHHHHHHHHHhCCC
Confidence 654 58765443 334434443333 33444
No 57
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.63 E-value=7.2e-14 Score=148.25 Aligned_cols=235 Identities=14% Similarity=0.055 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh----hhchhhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~----~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
...++..+.+.++++++|+++||+|||++++++.+++.+..+. ...++++.+++.|++.|++.+..+++..+++.+
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 130 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPE 130 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHH
Confidence 3356777888899999999999999999999988765544332 234678899999999999999999998889998
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC----CCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK----GGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 214 (314)
+. ++++|++++|++.....+|.++|+++++++..... +...+|.+.++++.+...++++++.+.+|
T Consensus 131 ~~----------~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (1146)
T PRK08633 131 LV----------GKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLP 200 (1146)
T ss_pred hc----------CcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCc
Confidence 86 67899999999999999999999999988865410 00012333333333333334444455566
Q ss_pred CCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccccc-hhhHHHHH
Q 021342 215 KEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVS-GVGGAMAV 292 (314)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~~-~ig~~~~~ 292 (314)
+.....+...++ ......++..+.....++++.++......+.......+....+|.++.. ..+... ..|+.+++
T Consensus 201 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~ 277 (1146)
T PRK08633 201 KVPAAAPEVFDK---KKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAA 277 (1146)
T ss_pred CCCCCCcccccc---cccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHH
Confidence 643321111000 0011111112223345666766655444333333333444455544322 334455 77888888
Q ss_pred HhhHhHHHHHHHHHHHHhh
Q 021342 293 YGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 293 ~G~~~~i~~~~~l~~~~~~ 311 (314)
.++..++++. ..+++.+.
T Consensus 278 ~~ig~~~g~~-~~g~l~~r 295 (1146)
T PRK08633 278 SAIGIGIGSL-LAGRLSGR 295 (1146)
T ss_pred HHHHHHHHHH-HHHHHhCC
Confidence 8888777665 56666654
No 58
>PRK09952 shikimate transporter; Provisional
Probab=99.63 E-value=1.7e-13 Score=131.19 Aligned_cols=121 Identities=16% Similarity=0.064 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhh--------HHHHHHHHhhhhhhhhhccchhhH
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i 136 (314)
++.+++..+++++.|++.||+|||+++.++.+.+.+..+.. +.+++. .+++.|+++|++.|..+++...++
T Consensus 71 ~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~ 150 (438)
T PRK09952 71 GVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLA 150 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHH
Confidence 45566778889999999999999999999999998877664 677765 488899999999999999888899
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC---CCCCCchhHHH
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLF 196 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~---~~~~~~~~~~~ 196 (314)
.|+. |+++||+..+.......+|..+|+.+...+..... ....+||..++
T Consensus 151 ~e~~----------p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~ 203 (438)
T PRK09952 151 VESA----------PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFL 203 (438)
T ss_pred HHhC----------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHH
Confidence 9886 67889999998888888888888776655543211 01246876543
No 59
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.62 E-value=2e-13 Score=130.45 Aligned_cols=151 Identities=15% Similarity=0.080 Sum_probs=111.9
Q ss_pred CCccccCccc-----cccchhhhhHHHHHHHHHHHhhHhhhhhhcC-CCCh----hHHHHHHHHHHHHHHHhhHHHHHHh
Q 021342 16 DSLQVLTPKN-----YTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNL----GTISLGILYTSFTCFSLVASLVVRV 85 (314)
Q Consensus 16 ~~~~p~n~~~-----~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~-~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~ 85 (314)
|-|||.-|.+ .+++++...++++..|........+...+.+ +.++ -....++..+.++++.++.|++.||
T Consensus 17 ~pe~~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr 96 (462)
T PRK15034 17 KPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI 96 (462)
T ss_pred CCCChHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666652 2467888788888888887766655444322 2222 2233567888999999999999999
Q ss_pred hchhhHHHHHHHHHHHHHHhh-hc-----hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHH
Q 021342 86 LGSKNALILGTTGYWLFVAAN-LF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFN 159 (314)
Q Consensus 86 ~G~k~~l~~g~~~~~~~~~~~-~~-----~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~ 159 (314)
+|+|+++.++.+...+..+.. +. ++++.+++.|++.|++ +..+++....++.++ |+++||+++
T Consensus 97 ~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wf----------p~~~rG~A~ 165 (462)
T PRK15034 97 FGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFF----------PKAKQGSAL 165 (462)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHC----------CHhHhHHHH
Confidence 999999999998887655543 33 7899999999999998 667777777788776 668999999
Q ss_pred HHHHHHHhhhhHHHHHHH
Q 021342 160 GEFWGMFASHQFVGNLIT 177 (314)
Q Consensus 160 ~~~~~~~~~g~~~G~li~ 177 (314)
|++....++|..+++++.
T Consensus 166 Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 166 GINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHhhHHHHHHHHH
Confidence 999767777776655544
No 60
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.61 E-value=1.5e-13 Score=132.97 Aligned_cols=156 Identities=13% Similarity=0.087 Sum_probs=115.3
Q ss_pred cccchhhhhHHHHHHHHHHHhhHhh----hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHH
Q 021342 26 YTRDVHILSCAFLLIFLAYGAAQNL----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (314)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~l----~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~ 101 (314)
+++.+..+.++.++....+.....+ .++.+.+........+...+...+++++.++++||+|||++++++.+...+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 97 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 3345555555555444433333322 333443333333446677788889999999999999999999999888766
Q ss_pred HHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHH
Q 021342 102 FVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (314)
Q Consensus 102 ~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i 180 (314)
..+.. +.++.+.+++.|++.|++.+..++....++.+.. ++++|++.++++.....+|..+||.+.+.+
T Consensus 98 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 98 GTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESW----------PKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55543 6788899999999999999988888888888876 668999999999999999999999998887
Q ss_pred HcCCCCCCCCchhHHH
Q 021342 181 LKDDKGGSTSGTTLLF 196 (314)
Q Consensus 181 ~~~~~~~~~~~~~~~~ 196 (314)
.+.. +|++.++
T Consensus 168 ~~~~-----~w~~~f~ 178 (496)
T PRK03893 168 VPVW-----GWRALFF 178 (496)
T ss_pred hccC-----CHHHHHH
Confidence 6543 5876543
No 61
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.61 E-value=8.9e-14 Score=128.96 Aligned_cols=231 Identities=8% Similarity=0.047 Sum_probs=145.0
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhc
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWV 130 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~ 130 (314)
+++.+.+........++..+.+.+++++.++++||+|||+++.++.+...+..+....++.+.++..|++.|++.+...+
T Consensus 27 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~g~~~~~~ 106 (355)
T TIGR00896 27 RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIGVGIAIINV 106 (355)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhc
Confidence 33444333333344678889999999999999999999999999987776544444567888888999999999998776
Q ss_pred cchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 021342 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (314)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 210 (314)
....++.+.. +++|+++++++.....+|..+|+.+++.+.+..+ .+|++. |....+..++.. .
T Consensus 107 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~---~~w~~~-f~~~~~~~~~~~--~ 169 (355)
T TIGR00896 107 LLPSLIKRDF-----------PQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG---GHWQQA-LAWWALPALLAL--L 169 (355)
T ss_pred cchHHHHHhC-----------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hhHHHH-HHHHHHHHHHHH--H
Confidence 6666665543 4689999999999999999999999877765431 136543 333333222222 2
Q ss_pred HhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhhHHH
Q 021342 211 CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAM 290 (314)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~ 290 (314)
..+++.+++++++. ..++.+ ..+.+|+|+.+.+...+............++|.++....++..+.|..+
T Consensus 170 ~~~~~~~~~~~~~~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~ 238 (355)
T TIGR00896 170 AWIPQVRRRVAANQ----TTTRLT-------PVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLL 238 (355)
T ss_pred HHhhhhccccCCCC----CCCCCC-------CchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 23444322111110 000011 1134566666554433332222222234456655544556678889999
Q ss_pred HHHhhHhHHHHHHHHHHHHh
Q 021342 291 AVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 291 ~~~G~~~~i~~~~~l~~~~~ 310 (314)
.++++..++++. ..+|+.|
T Consensus 239 ~~~~~~~i~~~~-~~g~l~d 257 (355)
T TIGR00896 239 ALMQLAQAASAL-LIPALAR 257 (355)
T ss_pred HHHHHHHHHHHH-hHHHHHh
Confidence 999998888765 4555543
No 62
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.61 E-value=1.8e-13 Score=128.79 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=108.8
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHh-----hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQN-----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~-----l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~ 99 (314)
+.++++..+.++.+..+.+...... ++++.+.+...-....++.++.+.+++++.|.++||+|||++++.+.+.+
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 5566777666665555554332222 22333333322334467888899999999999999999999999999877
Q ss_pred HHHHHhh----hc-----hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhh
Q 021342 100 WLFVAAN----LF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (314)
Q Consensus 100 ~~~~~~~----~~-----~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 170 (314)
.+..+.. +. .++..+++.|++.|++.+...++...++.+.. ++++|+++++++......|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~ 161 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV----------GALHTGRVISWNGIATYGAL 161 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc----------ChhhhccchhhhhhhhhHHH
Confidence 5533221 11 24667889999999999998887777777665 66899999999999999999
Q ss_pred HHHHHHHHHHHcCC
Q 021342 171 FVGNLITLAVLKDD 184 (314)
Q Consensus 171 ~~G~li~~~i~~~~ 184 (314)
++|+.+++.+.+..
T Consensus 162 ~~g~~l~~~l~~~~ 175 (399)
T PRK05122 162 AIGAPLGVLLYHWG 175 (399)
T ss_pred HHHHHHHHHHHHcc
Confidence 99999998887654
No 63
>PRK15075 citrate-proton symporter; Provisional
Probab=99.61 E-value=3.1e-13 Score=129.02 Aligned_cols=117 Identities=13% Similarity=0.040 Sum_probs=92.4
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhh--------HHHHHHHHhhhhhhhhhccchhhHhHhh
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAA 140 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 140 (314)
+...+++++.|+++||+|||++++.+.+.+.+..+.. +.++.. .+++.|+++|++.+..+++...+++|+.
T Consensus 67 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 146 (434)
T PRK15075 67 LMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIA 146 (434)
T ss_pred HHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhC
Confidence 3345788999999999999999999999888766654 666655 4678999999999999888888888886
Q ss_pred hhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC---CCCCCchhHHH
Q 021342 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLF 196 (314)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~---~~~~~~~~~~~ 196 (314)
|+++|+++++++....+.|..+|+.+++.+..... ....+||+.++
T Consensus 147 ----------p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~ 195 (434)
T PRK15075 147 ----------TPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFL 195 (434)
T ss_pred ----------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHH
Confidence 77999999999999888998888888777643211 01236876544
No 64
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.60 E-value=2e-13 Score=145.03 Aligned_cols=226 Identities=14% Similarity=0.059 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHH---HHHHHHHHHH-hhhchhhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALIL---GTTGYWLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~---g~~~~~~~~~-~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
....++..+.+.++++++|.++||+|||+++.. +.+......+ ++..++++.++++|+++|++.+..+++..+++.
T Consensus 55 ~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~ 134 (1140)
T PRK06814 55 TLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILP 134 (1140)
T ss_pred HHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhH
Confidence 344566778889999999999999999998643 2222222222 234478999999999999999999999998999
Q ss_pred HhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
++. ++++|++++|+..+..++|.++||++++++.... +|++. |+..+++.+++.++.++++++.
T Consensus 135 ~~~----------~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 135 DHL----------NKDELLGANALVEAGTFIAILLGTIIGGLATISG-----NFVIL-VALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred hhc----------CccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-----ccHHH-HHHHHHHHHHHHHHHhhCCCCC
Confidence 887 6789999999999999999999999999987654 47543 4444444444555556666653
Q ss_pred cccccccccccccccchHHHHH-HHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccc-cccccchhhHHHHHHhh
Q 021342 218 DKGEKETADASVNFYSYLVSLS-KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGA 295 (314)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~-~~lg~~~ig~~~~~~G~ 295 (314)
...+.. +. ..+..++. .......+++.++.+...++...+..+...+++|.+... ...+....|+.++.+++
T Consensus 199 ~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~ 272 (1140)
T PRK06814 199 NAAPDL--KI----DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSV 272 (1140)
T ss_pred CCCCCC--ee----ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHH
Confidence 321110 00 01111112 223345577777777766665555555556677755432 34567788999999999
Q ss_pred HhHHHHHHHHHHHHh
Q 021342 296 FDAIFLVELLLRWLY 310 (314)
Q Consensus 296 ~~~i~~~~~l~~~~~ 310 (314)
..+++++ +.+++.+
T Consensus 273 g~~ig~~-~~g~l~~ 286 (1140)
T PRK06814 273 GVAVGSF-LASKLSE 286 (1140)
T ss_pred HHHHHHH-HHHHHhC
Confidence 8888666 6667654
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.58 E-value=1.2e-13 Score=128.31 Aligned_cols=222 Identities=15% Similarity=0.028 Sum_probs=134.8
Q ss_pred HHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhh--------HHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
.++...+++++.|+++||+|||+++.++.+.+.+..+.. +.+++. .+++.|+++|++.+..+++...++++
T Consensus 44 ~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 123 (394)
T TIGR00883 44 GFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAE 123 (394)
T ss_pred HHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence 334445788999999999999999999998887655543 555543 47789999999999998888888888
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCC---CCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG---GSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 215 (314)
.. ++++|++..++......+|..+|++++..+....+. ...+||+. |++..++.+++..+...++|
T Consensus 124 ~~----------~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~ 192 (394)
T TIGR00883 124 YA----------PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIP-FLVSAVLVLIGLYLRRNLEE 192 (394)
T ss_pred cC----------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHH-HHHHHHHHHHHHHHHHhcCC
Confidence 76 678999999999999999999999887665431110 12357654 44434444444444444565
Q ss_pred CccccccccccccccccchHHHHHHHHHHhhcChh--HHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhhHHHHH
Q 021342 216 EEDKGEKETADASVNFYSYLVSLSKSITTLLADVR--MLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAV 292 (314)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~ 292 (314)
+++.++++++ +++.+++.++ .+++++ .+......+.............|.++. ...++..+.+..+..
T Consensus 193 ~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 263 (394)
T TIGR00883 193 TPVFEKAQEK--HKKKRGPIRE-------TLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLML 263 (394)
T ss_pred ChhHHHHHhc--cccccCCHHH-------HHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHH
Confidence 4332111100 0011112222 233333 333333333333333333344554432 234556777888888
Q ss_pred HhhHhHHHHHHHHHHHHh
Q 021342 293 YGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 293 ~G~~~~i~~~~~l~~~~~ 310 (314)
.++.+.+++. ..+++.|
T Consensus 264 ~~~~~~~~~~-~~g~l~d 280 (394)
T TIGR00883 264 SLILFFITIP-LSGALSD 280 (394)
T ss_pred HHHHHHHHHH-HHHHHHH
Confidence 8887777654 4455544
No 66
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.58 E-value=4.9e-13 Score=125.56 Aligned_cols=254 Identities=10% Similarity=-0.011 Sum_probs=153.8
Q ss_pred cchhhhhHHHHHHHHHHHhhHhhhhhhcCCCCh----hHHHHHHHHHHHHHHHhhHHHHHHhhchhh----HHHHHHHHH
Q 021342 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNL----GTISLGILYTSFTCFSLVASLVVRVLGSKN----ALILGTTGY 99 (314)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~----~l~~g~~~~ 99 (314)
+....+.+.++..+.++.......+...++.+. -....++..+...+++++.++++||+||+. .+.++...+
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 4 QPFRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIF 83 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 344556777777776655444433333222222 223356677788888899999999999743 333333222
Q ss_pred HHHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHH
Q 021342 100 WLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (314)
Q Consensus 100 ~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~ 179 (314)
.+. .....++++.+++.|++.|.+.+...+...++..+. +++|+++.|......++|.++||++++.
T Consensus 84 ~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~------------~~~~~~~~g~~~~~~slG~~~g~~l~g~ 150 (382)
T TIGR00902 84 AAA-FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW------------QKQFGLDYGKVRLIGSAAFIIGSALFGG 150 (382)
T ss_pred HHH-HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH------------HHHcCCCccHHHHHHHHHHHHHHHHHHH
Confidence 221 112457788888999999999887766655444332 3678888999999999999999999988
Q ss_pred HHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC-ccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHH
Q 021342 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE-EDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF 258 (314)
Q Consensus 180 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~ 258 (314)
+.+.. +|+..+++. .....+.. +.+.++|+ +++++++ + ++.+ ..++..+.+|+|+.+.+....
T Consensus 151 l~~~~-----g~~~~f~~~-~~~~~~~~-~~~~~~~~~~~~~~~~--~---~~~~----~~~~~~~~l~~~~~~~~l~~~ 214 (382)
T TIGR00902 151 LIGMF-----DEQNILAIL-TAGLAFML-IGFLIKPTIPPKDAIP--E---DESQ----GDSAFIALLKNPMNLRFLAAV 214 (382)
T ss_pred HHHHc-----ChhHHHHHH-HHHHHHHH-HHHHcCCCCCCCcccc--c---cccc----cchhHHHHHcChHHHHHHHHH
Confidence 88764 487654433 22222222 22333332 2211110 0 0001 112234578899887776655
Q ss_pred HHHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 259 AYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 259 ~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
+......+..++.+|.+.....++..++|+++++..+.+++ .....+|+.|-
T Consensus 215 ~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~-~~~~~~~l~~r 266 (382)
T TIGR00902 215 CLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEII-IFAFSNKLFQN 266 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHH-HHHHhHHHHhh
Confidence 55455555566677755555566788899988876666665 45577777654
No 67
>TIGR00898 2A0119 cation transport protein.
Probab=99.56 E-value=2.5e-13 Score=131.86 Aligned_cols=137 Identities=15% Similarity=0.091 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhh
Q 021342 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (314)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 140 (314)
....++.+++..+++++.|+++||+|||++++++.+...+..+. .+.++++.+++.|++.|++.+..++....++.++.
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~ 209 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFL 209 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheec
Confidence 34568888999999999999999999999999999888776655 47889999999999999999998888888888876
Q ss_pred hhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
++++|++..+++......|.++++++++.+. +||+. |++..+..++..+..+++||++
T Consensus 210 ----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--------~wr~~-~~~~~i~~~~~~~~~~~~~esp 267 (505)
T TIGR00898 210 ----------PKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP--------DWRWL-QLAVSLPTFLFFLLSWFVPESP 267 (505)
T ss_pred ----------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--------HHHHH-HHHHHHHHHHHHHHHHhcCCCh
Confidence 6789999999999999999999999886652 28665 4444444555555557788864
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.55 E-value=2.8e-12 Score=121.76 Aligned_cols=122 Identities=9% Similarity=0.100 Sum_probs=98.5
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh----hchhhhHHHHHHHHhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN----LFPSWYTMVPASLYLGFAAS 126 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~----~~~~~~~l~~~r~l~G~g~~ 126 (314)
+++.+.+........+..+..+.+++++.+++.||+|||++++++.+.+++..+.. ..++++.+++.|++.|+|.|
T Consensus 30 ~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g 109 (410)
T TIGR00885 30 QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLG 109 (410)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHH
Confidence 44444333333334678888999999999999999999999999998876654432 23578888999999999999
Q ss_pred hhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 127 IIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 127 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
..+++...++.+.. ++++|++.+++.....++|..+||+++..+..
T Consensus 110 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~ 155 (410)
T TIGR00885 110 FLETAANPYILVMG----------PESTATRRLNLAQSFNPFGSIIGMVVAQQLIL 155 (410)
T ss_pred HHHhhhhHHHHHHC----------CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998888888875 56789999999999999999999999887754
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.55 E-value=1.1e-12 Score=119.88 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 60 LGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 60 ~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
......++..+...+++++.|+++||+|||+.+.++.+...+..... ..++.+.+++.|++.|++.+..++....++.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 114 (352)
T cd06174 35 QAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAE 114 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHH
Confidence 33444677778888999999999999999999999998887766554 56788999999999999999999988888888
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhc
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 213 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 213 (314)
+. ++++|++.+++......+|..+||.+++.+.+.. +|++. |.+.....++..+..+++
T Consensus 115 ~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~ 173 (352)
T cd06174 115 WF----------PPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-----GWRWL-FLILAILGLLLALLLLFL 173 (352)
T ss_pred hC----------CccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHH-HHHHHHHHHHHHHHHHHH
Confidence 86 5689999999999999999999999998887654 36554 444444444444444433
No 70
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.54 E-value=4.1e-13 Score=123.96 Aligned_cols=269 Identities=9% Similarity=0.037 Sum_probs=172.6
Q ss_pred Cccccccchhh-hhHHHHHHHHHHHhhHhhhhhhcCCC-----ChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHH
Q 021342 22 TPKNYTRDVHI-LSCAFLLIFLAYGAAQNLETTVNTEG-----NLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILG 95 (314)
Q Consensus 22 n~~~~~~~~~~-l~~~~~~~~~~~~~~~~l~~~i~~~~-----~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g 95 (314)
.|++++.++++ +-++...++.........++.+.++. ++|.+ .+.+++.|+++.++.|.++||.++|..+.+|
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i-~s~f~i~YG~sKf~~G~~sDr~npr~fm~~g 100 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGIL-GSAFSITYGVSKFVMGVLSDRSNPRYFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHH-HHHHHHHHHHHHHHhhhhcccCCCceeehHH
Confidence 44444444443 22333333433333333334443332 33444 5799999999999999999999999999999
Q ss_pred HHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHH
Q 021342 96 TTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (314)
Q Consensus 96 ~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~ 174 (314)
++.-++..+.+ +.++...+.+.-++.|+..|.-|++....++.++ +++|||+..+++..+.++|..+-|
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wf----------sr~eRG~~~siWn~shNiGGal~~ 170 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWF----------SRKERGTWWSIWNTSHNIGGALAP 170 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHc----------CccccCceEEEehhhhhcccchHH
Confidence 99888777765 7789988888999999999999999999999997 679999999999999999998888
Q ss_pred HHH--HHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccc--------ccccccc--cc--cccchHHHHHH
Q 021342 175 LIT--LAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG--------EKETADA--SV--NFYSYLVSLSK 240 (314)
Q Consensus 175 li~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--------~~~~~~~--~~--~~~~~~~~~~~ 240 (314)
++. +.+..+. +||..+|.-.++..++++++.+.+++++++. ++|+.+. +. .+..+.+|.+.
T Consensus 171 ~~~~la~~~~~~-----~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~ 245 (448)
T COG2271 171 LVALLAFFAFHG-----GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFV 245 (448)
T ss_pred HHHHHHHHHhcc-----chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHH
Confidence 777 6665543 5876655443444445666666777754321 1111111 11 11134455554
Q ss_pred HHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhhHHHHHHhhHhHHHHHHHHHHHH
Q 021342 241 SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAIFLVELLLRWL 309 (314)
Q Consensus 241 ~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~ 309 (314)
+ ..++||..+++....+..=+..--..-+-|.+.. ...++....+.+...|=.....+++ +.|+++
T Consensus 246 ~--YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~L-l~GwlS 312 (448)
T COG2271 246 K--YVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTL-LAGWLS 312 (448)
T ss_pred H--HHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHH-HHHHHH
Confidence 4 3788988888776544433333333334443332 2345566666666666665555554 444444
No 71
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.54 E-value=3.3e-14 Score=129.96 Aligned_cols=186 Identities=18% Similarity=0.168 Sum_probs=137.4
Q ss_pred CChhHHHHHHHHHHHHHHHh----hHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccc
Q 021342 58 GNLGTISLGILYTSFTCFSL----VASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGE 132 (314)
Q Consensus 58 ~~~g~~~~~~~~~~~~~~~~----~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~ 132 (314)
.+..+...+++..+.++.++ +.|++.||+|+|.-|++|.......++.+ +..++..++++|.++|+|.+..|++.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 33445667788888887776 56889999999999999998877766665 77888899999999999999999999
Q ss_pred hhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 021342 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 133 ~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (314)
.++++|.+ ++++||++++|+.-.+..+|..+||.+|+.+.+..+ ...-|++..++.++-..+-++
T Consensus 181 lamlAd~f---------~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G------k~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 181 LAMLADVF---------PEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG------KSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred HHHHHHHc---------ccchhhhHHHHHHHHHHhccceecCCcccchHhhcC------CcCcHHHHHHHHHHHHHHHHh
Confidence 99999886 367899999999999999999999999999877643 233477877777776666666
Q ss_pred ccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhc
Q 021342 213 LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA 270 (314)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~ 270 (314)
+-||.+..++.. .+.. .++++++||.++...-....++...+|.-.
T Consensus 246 vi~p~~~~~~~~-----~~~~-------~~~~Ll~dP~I~~~agai~~~n~~lafLeP 291 (464)
T KOG3764|consen 246 VIEPTEMDPDST-----EQGT-------PMWSLLMDPYILLIAGAITFSNSSLAFLEP 291 (464)
T ss_pred eeCccccCcccc-----ccCc-------cHHHHHhCchHhhhhcchhhccchHHHhCc
Confidence 655544322110 0111 133456667666665555555555555543
No 72
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.54 E-value=1.6e-12 Score=126.59 Aligned_cols=144 Identities=15% Similarity=0.024 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchh------hhHHHHHHHHhhhhhhhhhccchhhH
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~~~~~~~~~~~i 136 (314)
..+...++..++++++++++||+|||+++.++.+++.+..+.. +.++ +..+++.|++.|++.|..++....++
T Consensus 61 ~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~ 140 (502)
T TIGR00887 61 VNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIIT 140 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 3567778888999999999999999999999988887655542 4343 67888999999999999999999999
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCC------------------CCCCchhHHHHH
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG------------------GSTSGTTLLFIV 198 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~------------------~~~~~~~~~~~~ 198 (314)
++++ |+++||+..++......+|..+|+.++..+.....+ .+.+||.. +.+
T Consensus 141 ~e~~----------p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~-~~~ 209 (502)
T TIGR00887 141 SEFA----------TKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRIL-IGF 209 (502)
T ss_pred HHhc----------ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHH-HHH
Confidence 9987 779999999999999999999999988765431110 01258654 344
Q ss_pred HHHHHHHHHHHHHhccCCcc
Q 021342 199 FLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 199 ~~~~~~~~~~l~~~l~~~~~ 218 (314)
..+.+++..++.+++||+++
T Consensus 210 ~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 210 GAVPALLALYFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHHhCCCCHH
Confidence 44444555555677899753
No 73
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.54 E-value=2.1e-12 Score=121.59 Aligned_cols=225 Identities=14% Similarity=0.064 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh----hc-----hhhhHHHHHHHHhhhhhhhhhccch
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN----LF-----PSWYTMVPASLYLGFAASIIWVGEG 133 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~----~~-----~~~~~l~~~r~l~G~g~~~~~~~~~ 133 (314)
...++..+...+++++.|+++||+|||+.++.+...+.+..... .. ..+..+++.|++.|++.+...+...
T Consensus 42 ~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (396)
T TIGR00882 42 IVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIE 121 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHH
Confidence 44678888889999999999999999999988776654322221 11 1233345567777777766555544
Q ss_pred hhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh-
Q 021342 134 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF- 212 (314)
Q Consensus 134 ~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 212 (314)
.+..+.. +++++.+|......++|..+||++++.+... +|+.. |++...+.++..++.++
T Consensus 122 ~~~~~~~------------~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~------~~~~~-f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 122 AYIEKVS------------RNSNFEYGKARMFGCVGWALCASIAGILFSI------DPQIV-FWLGSGFALILMLLLMFA 182 (396)
T ss_pred HHHHHhh------------hhcccccchhhhhcccHHHHHHHHHhhhhcc------CchHH-HHHHHHHHHHHHHHHHHh
Confidence 4433321 2334556666677789999999998876432 47654 44444444444433444
Q ss_pred ccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccc----cccccccchhhH
Q 021342 213 LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI----VTPALGVSGVGG 288 (314)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~----~~~~lg~~~ig~ 288 (314)
.+|+++++++.+.+...++++ +.++..+.+|||+.+.+.+..+............++.++ .....+...+|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~ 258 (396)
T TIGR00882 183 KPKAPSSATVANALGANASAF----SLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGY 258 (396)
T ss_pred CCCCchhhhhhcccccccCCC----CHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHH
Confidence 333322111110000001111 123345677888876655443322222222222233222 122345667788
Q ss_pred HHHHHhhHhHHHHHHHHHHHHhh
Q 021342 289 AMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 289 ~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
...+.++.+++.+. ..+++.|-
T Consensus 259 ~~~~~~i~~~~~~~-~~g~l~~r 280 (396)
T TIGR00882 259 VTTMGELLNALIMF-CAPLIINR 280 (396)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHH
Confidence 88887777777554 55666654
No 74
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.53 E-value=4.5e-13 Score=128.49 Aligned_cols=217 Identities=8% Similarity=0.040 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h--chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
.+..+.++.+++++++.+.||+|.|+++..+.++.++.++.. + ..+++.+++.|+++|++.|..+++.+.+.+.++
T Consensus 79 ~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~- 157 (466)
T KOG2532|consen 79 FSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWA- 157 (466)
T ss_pred HHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeEC-
Confidence 677888888999999999999999999999998887766553 2 234557789999999999999999999999997
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccC-Cccc
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRK-EEDK 219 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~-~~~~ 219 (314)
|++||++..++..+..++|.+++..+++.+-+.. .+|+..+|+. .+++++ .++.+++..| |.++
T Consensus 158 ---------P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~----~GW~sifY~~-g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 158 ---------PPNERSTFIAILTAGSQLGTIITMPVSGLLCESS----LGWPSIFYVF-GIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC----CCCchHHHHH-HHHHHHHHHHHHHHhcCCcccC
Confidence 8899999999999999999999999988887652 3698776654 454444 4444444444 3332
Q ss_pred ccccccc--------ccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhhHHH
Q 021342 220 GEKETAD--------ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAM 290 (314)
Q Consensus 220 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~ 290 (314)
+.-.++| .+...++..+- ...+.++++.++......+.-.+...+.....|.++. ...+.+++.|+..
T Consensus 224 ~~is~~El~~I~~~k~~~~~~~~~~v---P~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~s 300 (466)
T KOG2532|consen 224 PNISEKELKYIEKGKSEAHVKKKPPV---PYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLS 300 (466)
T ss_pred CCCCHHHHHHHHhcccccccCCCCCC---CHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHH
Confidence 2111000 00000000000 1234678888888887777777777777888887765 3567788888766
Q ss_pred HHHhhHhHH
Q 021342 291 AVYGAFDAI 299 (314)
Q Consensus 291 ~~~G~~~~i 299 (314)
++=-+...+
T Consensus 301 alP~l~~~~ 309 (466)
T KOG2532|consen 301 ALPFLAMAI 309 (466)
T ss_pred HHHHHHHHH
Confidence 554444444
No 75
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.52 E-value=3e-12 Score=118.63 Aligned_cols=221 Identities=9% Similarity=0.074 Sum_probs=131.9
Q ss_pred HHHHHHHhhHHHHHHhh-----chhhHH-HHHHHHHHHHHHh-hhc---hhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 70 TSFTCFSLVASLVVRVL-----GSKNAL-ILGTTGYWLFVAA-NLF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~-----G~k~~l-~~g~~~~~~~~~~-~~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
..+++ .+++++++||+ |||+.+ +.+.+..++..+. .+. .+.+.+....++.|++.+...++..+++.++
T Consensus 33 ~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~ 111 (356)
T TIGR00901 33 LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEI 111 (356)
T ss_pred HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444 88999999998 898875 5566666554333 233 3455566667778888887777777788887
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCC---CCCCchhHHHHHHHHHHHHHHHHHHh-ccC
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG---GSTSGTTLLFIVFLGVITLGTILMCF-LRK 215 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~ 215 (314)
. ++++|+++.++......+|.++|+.+++.+....+. .+.+||.. |++..++.+++.+..++ .||
T Consensus 112 ~----------~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~-f~i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 112 L----------SDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI-FFWTALLILPGLLVTLFLAKE 180 (356)
T ss_pred C----------CHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH-HHHHHHHHHHHHHHHHHhccC
Confidence 6 678999999999999999999999998877654320 11238654 44444444444444443 566
Q ss_pred CccccccccccccccccchHHHHHHHHHHhhcChh---HHHHHHHHHHHhHHHhhhhccccccccccccccchhhHHHHH
Q 021342 216 EEDKGEKETADASVNFYSYLVSLSKSITTLLADVR---MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAV 292 (314)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~ 292 (314)
+.++++++ .+++++.++.+++ .++++. .+.+....+..........+.+|.+.....++..+.|.+..+
T Consensus 181 ~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~ 252 (356)
T TIGR00901 181 PQEDASVP-----KPLTQAVLKPIRE---FFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKI 252 (356)
T ss_pred CCcccccc-----hhHHHHHHHHHHH---HHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHH
Confidence 43321110 0011122233333 344443 444443333334444445556665544445668888888888
Q ss_pred HhhHhHHHHHHHHHHHHh
Q 021342 293 YGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 293 ~G~~~~i~~~~~l~~~~~ 310 (314)
.|....+......+++.|
T Consensus 253 ~~~~~~~~g~~~~g~l~~ 270 (356)
T TIGR00901 253 NGLLGAILGGLIGGIIMQ 270 (356)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 886555444445555553
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.51 E-value=2.7e-12 Score=120.49 Aligned_cols=219 Identities=12% Similarity=-0.050 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchh----hHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSK----NALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k----~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
..++..+...++++++++++||+||| +.+.++.....+ ......++.+.+++.|++.|++.+..++...++..++
T Consensus 44 ~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~ 122 (382)
T PRK11128 44 LLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV-AFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW 122 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 35667777888899999999999983 333333322221 1122347788888899999999988888766555554
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 219 (314)
. ++|++..+.......+|..+||++++.+.++. +|+..+ ++..+..++..+..++.||++++
T Consensus 123 ~------------~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-----g~~~~f-~~~~~~~~~~~~~~~~~~~~~~~ 184 (382)
T PRK11128 123 Q------------KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-----GEQAIL-WILTAGVASMLLGQLLRPTIMPQ 184 (382)
T ss_pred H------------hhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-----ChhHHH-HHHHHHHHHHHHHHHccCCCCCc
Confidence 2 45666677777777899999999999987764 487554 33333333333333344443222
Q ss_pred cccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHH
Q 021342 220 GEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAI 299 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i 299 (314)
.+++ . +. ++.. ++..+.+|+|+++.+....+..+...+.....+|.+.....++...+|..+++.++.+++
T Consensus 185 ~~~~---~--~~-~~~~---~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~ 255 (382)
T PRK11128 185 GESR---Q--QE-SAGW---PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVL 255 (382)
T ss_pred cccc---c--cc-cccc---chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHH
Confidence 1111 0 00 0001 122356788888776655444444444444455544333345566788888877666655
Q ss_pred HHHHHHHHHHhh
Q 021342 300 FLVELLLRWLYF 311 (314)
Q Consensus 300 ~~~~~l~~~~~~ 311 (314)
.+ ...+|+.|-
T Consensus 256 ~~-~~~g~l~~r 266 (382)
T PRK11128 256 IF-AFSNRLFRR 266 (382)
T ss_pred HH-HHHHHHHHH
Confidence 43 466666653
No 77
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.51 E-value=7.4e-12 Score=116.29 Aligned_cols=216 Identities=13% Similarity=-0.008 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHH-HHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALIL-GTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~-g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.++..+...+.+++.+.++||+|||+.++. +.+...+..+. .+.++++.+++.|++.|.+.+...+....+..+..
T Consensus 39 ~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~-- 116 (375)
T TIGR00899 39 YTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHA-- 116 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHh--
Confidence 445555666777889999999999887665 44444443333 36678888888899998887766655555555543
Q ss_pred hhhhcCCCCccchhhH--HHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccc
Q 021342 143 HASNHKLHEGTVIGSF--NGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDK 219 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~--~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~~~~ 219 (314)
++++|++. .+......++|..+||.+++.+.+.. +|++. |++...+.++..++ .+++||+++.
T Consensus 117 --------~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-----~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T TIGR00899 117 --------DRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-----GFTVM-FLTAALAFVLCGVLVWLFLPSYPRG 182 (375)
T ss_pred --------hhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-----ccHHH-HHHHHHHHHHHHHHHHHhCCCcccC
Confidence 33444433 57777778899999999988886543 58655 44444444444333 3457764332
Q ss_pred cccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhhHHHHHHhhHhH
Q 021342 220 GEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDA 298 (314)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~~G~~~~ 298 (314)
++++. ++.+ .+ +.+++++.+.+....+............+|.++. ....+..+.|..+....+...
T Consensus 183 ~~~~~------~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 249 (375)
T TIGR00899 183 APGAL------TRLE----VR---GLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEI 249 (375)
T ss_pred ccccc------Ccch----hh---hhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 21110 0111 11 1345555544332222211112222333443332 234556677776666555554
Q ss_pred HHHHHHHHHHHh
Q 021342 299 IFLVELLLRWLY 310 (314)
Q Consensus 299 i~~~~~l~~~~~ 310 (314)
+++. ..+++.|
T Consensus 250 ~~~~-~~g~l~~ 260 (375)
T TIGR00899 250 PFML-LAGYLIK 260 (375)
T ss_pred HHHH-hHHHHHH
Confidence 4332 3445444
No 78
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.51 E-value=1.1e-13 Score=125.80 Aligned_cols=106 Identities=13% Similarity=-0.028 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
+.+.+.-.+++..+|.++|++|||+++.+|.++-+++... ....|+..++.+|++.|+..+...++ -++++|+.
T Consensus 75 SsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~-rAiisdV~---- 149 (451)
T KOG2615|consen 75 SSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVI-RAIISDVV---- 149 (451)
T ss_pred hHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH-HHHHHhhc----
Confidence 4555666677778899999999999999999887775554 36788877777899999999977544 45777776
Q ss_pred hhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
+|++|++.++....++++|.++||.+|+++.+
T Consensus 150 ------sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 150 ------SEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ------ChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 67999999999999999999999999999877
No 79
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.50 E-value=3.5e-13 Score=135.75 Aligned_cols=144 Identities=12% Similarity=0.035 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
...++.+++..++++++|+++||+|||++++++.+++.+..+.. +.++++.++++|++.|++.+...+...+++++++
T Consensus 206 ~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~- 284 (742)
T TIGR01299 206 MLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFL- 284 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 34678889999999999999999999999999998887766553 6788999999999999999999888899999986
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC--------CCCCCchhHHHHHHHHHHHHHHHHHHhc
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--------GGSTSGTTLLFIVFLGVITLGTILMCFL 213 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~l 213 (314)
|+++||+.++++.+...+|.+++++++..+....+ ....+||+. +++.++..++.+++.+++
T Consensus 285 ---------p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l-~~i~~lp~ll~ll~~~~l 354 (742)
T TIGR01299 285 ---------AQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVF-VIVCAFPCVFAIGALTFM 354 (742)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHH-HHHHHHHHHHHHHHHHHc
Confidence 67899999999999999999999998877654321 011357654 444445555566666789
Q ss_pred cCCc
Q 021342 214 RKEE 217 (314)
Q Consensus 214 ~~~~ 217 (314)
||++
T Consensus 355 PESP 358 (742)
T TIGR01299 355 PESP 358 (742)
T ss_pred CCCH
Confidence 9874
No 80
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.50 E-value=1.1e-13 Score=135.33 Aligned_cols=144 Identities=13% Similarity=0.076 Sum_probs=117.5
Q ss_pred cCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccch
Q 021342 55 NTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEG 133 (314)
Q Consensus 55 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~ 133 (314)
+.+........++++++..+|+++.|+++|++|||++++.+.+.+.++.... +++|+..+++.|++.|++.+...+...
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~ 193 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGF 193 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhH
Confidence 3345556677899999999999999999999999999999999999888775 899999999999999999999999999
Q ss_pred hhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhc
Q 021342 134 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 213 (314)
Q Consensus 134 ~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 213 (314)
.+++|+. .+++|+....+ ......+..+++..++++.+ +||+..++. ...+.+.+++.++.
T Consensus 194 ~~~~E~~----------~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-------~Wr~~~~~~-~~~~~~~~~~~~l~ 254 (521)
T KOG0255|consen 194 GLVAEIV----------SPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-------DWRWLFWII-SIPSGLFLLLWFLP 254 (521)
T ss_pred hhheeec----------CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-------hHHHHHHHH-HHHHHHHHHHHHcc
Confidence 9999886 67999999999 77778888888888777765 398765544 44444444444555
Q ss_pred cCCc
Q 021342 214 RKEE 217 (314)
Q Consensus 214 ~~~~ 217 (314)
+|++
T Consensus 255 ~Es~ 258 (521)
T KOG0255|consen 255 PESP 258 (521)
T ss_pred CcCh
Confidence 5765
No 81
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=4.2e-12 Score=120.63 Aligned_cols=266 Identities=13% Similarity=0.076 Sum_probs=136.2
Q ss_pred ccchhhhhHHHHHHHHHHHhhHhh-----hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHH
Q 021342 27 TRDVHILSCAFLLIFLAYGAAQNL-----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (314)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~l-----~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~ 101 (314)
++++..+.+.+++.+.++.....+ +++.+.+...-....++..+...++++++|.++||+|||++++++..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLV 88 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 345556556666665554332222 222332322223346788889999999999999999999999887665543
Q ss_pred HHHhhhc----hhhh-HHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHH
Q 021342 102 FVAANLF----PSWY-TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (314)
Q Consensus 102 ~~~~~~~----~~~~-~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li 176 (314)
.....+. +... .......+.|+..+..+.+....+.++.++ ..++++..+|......++|..+||.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~g~~~~~~~~g~~i~~~~ 160 (420)
T PRK09528 89 LFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER--------VSRRSGFEYGRARMWGSLGWALCAFI 160 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH--------HHhhccccchhhHHhhhHHHHHHHHH
Confidence 3221111 1110 111122333333333333322223333321 12456777777777889999999999
Q ss_pred HHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHH
Q 021342 177 TLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP 256 (314)
Q Consensus 177 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p 256 (314)
++.+... +|+.. |++..+..++..++.+++++++++++++.++...+++ +...++..+.+|+|+++.+..
T Consensus 161 ~g~l~~~------~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~l~l 230 (420)
T PRK09528 161 AGILFNI------NPQIN-FWLGSGSALILLVLLFFAKPDAPSTAKVANALGANAS---AVSLKDALALLKLPKFWFLVL 230 (420)
T ss_pred HHHHHhc------CchHh-HHHHHHHHHHHHHHHhcccccccchhhhccchhcccc---cccHHHHHHHccCCCeEeehH
Confidence 8877542 36543 4444444444444444444332221111000000011 112344445778887655443
Q ss_pred HHHHHhHHHhhhhccccccc----cccccccchhhHHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 257 LFAYSGLQQAFVWAEFTKEI----VTPALGVSGVGGAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 257 ~~~~~g~~~~f~~~~~~~~~----~~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
..+............+|.+. .....+..+.|++..+.++.+++++. ..+++.|-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~l~dr 288 (420)
T PRK09528 231 YVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMF-FAPFIINR 288 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 33222222222222333322 12234556788888888888877554 55666554
No 82
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.45 E-value=5.1e-11 Score=112.55 Aligned_cols=215 Identities=12% Similarity=0.098 Sum_probs=129.1
Q ss_pred HHHHhhHHHHHHhh-----chhh-HHHHHHHHHHHHHHh-hhc---hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 73 TCFSLVASLVVRVL-----GSKN-ALILGTTGYWLFVAA-NLF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 73 ~~~~~~~~~l~~~~-----G~k~-~l~~g~~~~~~~~~~-~~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.+..+++++++||+ |||+ .+.++.++.++.... .+. .+.+.+++..++.|++.+...++..+++.++.
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~-- 123 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVL-- 123 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 47778999999999 8765 677777666543333 233 34666777777788888877777777888875
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccccc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK 222 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 222 (314)
+++||+++.++.......|.++|+.++..+.+.. .+||.. |++..++.++..+..+++|||+..+++
T Consensus 124 --------~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~----~gw~~~-f~i~a~~~l~~~l~~~~~~e~~~~~~~ 190 (402)
T PRK11902 124 --------HPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV----LGWGNT-YLLMAGLMLAGALTTLWAPEPEVPARP 190 (402)
T ss_pred --------ChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc----cCHHHH-HHHHHHHHHHHHHHHHhcCCCcccccc
Confidence 6688999999999999999999999888776532 158765 444444444444444567776432211
Q ss_pred ccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhhHHHHHHhhHhHHHH
Q 021342 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAIFL 301 (314)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~~G~~~~i~~ 301 (314)
++ +.+++.++ ...+.+++|..+.+....+.......+..+..+..+. ...++.+++|+.+.+.|....+..
T Consensus 191 ~~-----~~~~~~~~---~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g 262 (402)
T PRK11902 191 PR-----SLGEAVVG---PLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVG 262 (402)
T ss_pred cc-----hhHHHHHH---HHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHH
Confidence 10 00111222 3335677887665554333332222222233332222 235667788888777666533333
Q ss_pred HHHHHHHHh
Q 021342 302 VELLLRWLY 310 (314)
Q Consensus 302 ~~~l~~~~~ 310 (314)
....+++.|
T Consensus 263 ~~~~g~l~~ 271 (402)
T PRK11902 263 ALAGGTLMV 271 (402)
T ss_pred HHHHHHHHH
Confidence 334555543
No 83
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.39 E-value=2.2e-11 Score=118.22 Aligned_cols=182 Identities=9% Similarity=0.014 Sum_probs=121.7
Q ss_pred cccCccccccchhhhhHHHHHHHHHHHhhH-----hhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHh-hchhhHH
Q 021342 19 QVLTPKNYTRDVHILSCAFLLIFLAYGAAQ-----NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRV-LGSKNAL 92 (314)
Q Consensus 19 ~p~n~~~~~~~~~~l~~~~~~~~~~~~~~~-----~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~G~k~~l 92 (314)
.|-|.+++.|.+..+.+..+.--.+|.... -++++++.+........+.+.....+..+++|.++|| +|||+++
T Consensus 5 ~~~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~ 84 (489)
T PRK10207 5 APMGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI 84 (489)
T ss_pred CCcchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH
Confidence 455666667777776655544434443332 2234444443333344455555666677789999999 9999999
Q ss_pred HHHHHHHHHHHHhh-hchh-hhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhh
Q 021342 93 ILGTTGYWLFVAAN-LFPS-WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (314)
Q Consensus 93 ~~g~~~~~~~~~~~-~~~~-~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~ 170 (314)
++|.+.+.+..+.. +.++ ...++++|+++|+|.|...+...+++++..++ ++++|+++++++....++|.
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~--------~~~~~~~~~~~~~~~~nig~ 156 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPP--------KDPRLDGAFTLFYMSINIGS 156 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCC--------CchhhhcchhHHHHHHHHHH
Confidence 99999998765543 4444 33455799999999999998888888887621 12256888999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 021342 171 FVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (314)
Q Consensus 171 ~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 214 (314)
.+||.+++++.++. +|++.++ +..+...++++...+.+
T Consensus 157 ~~g~~l~g~l~~~~-----gw~~~F~-i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 157 LISLSLAPVIADKF-----GYSVTYN-LCGAGLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHHHHHHhh-----ChHHHHH-HHHHHHHHHHHHHHHcc
Confidence 99999999997764 5865543 33332333343333444
No 84
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=1.6e-10 Score=110.06 Aligned_cols=223 Identities=9% Similarity=-0.069 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhch-hhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGS-KNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~-k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.++..+...+++++++.++||+|+ |+++.++.++..+.... .+.++++.+++.|++.|++.++..+...+...+...+
T Consensus 44 ~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 123 (418)
T TIGR00889 44 YSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQ 123 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhh
Confidence 578888888999999999999965 88888877776554433 3567788888899999998776655443333222211
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccccc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK 222 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 222 (314)
+.+ |......|.+..| .+|.++||++++.+.... .|. + +.+..++.++..++.+++||+++.+ +
T Consensus 124 ~g~--~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~-----~~~-~-f~~~~~~~~~~~~~~~~~~e~~~~~-~ 187 (418)
T TIGR00889 124 AGL--DVVTDFPPIRVMG------TIGFIAAMWAVSLLDIEL-----SNI-Q-LYITAGSSALLGVFALTLPDIPVAK-S 187 (418)
T ss_pred cCC--CchhcCCCeeeeh------hHHHHHHHHHHHHhcccc-----hhH-H-HHHHHHHHHHHHHHHhcCCCCCCCc-c
Confidence 110 1112234555555 368888898887762211 132 2 3344444444444556677753221 1
Q ss_pred ccccccccccchHHHHH-HHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccccc--------ccccchhhHHHHHH
Q 021342 223 ETADASVNFYSYLVSLS-KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--------ALGVSGVGGAMAVY 293 (314)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~--------~lg~~~ig~~~~~~ 293 (314)
+++ .+.++.. .+..+.+|+|+++.+....+..+....+.+..++.+.... .++.+.+|+.+.+.
T Consensus 188 ~~~-------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 260 (418)
T TIGR00889 188 TAK-------MSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLS 260 (418)
T ss_pred ccc-------cCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHH
Confidence 100 0111111 1123467888877666655555544445555555433222 13457789999999
Q ss_pred hhHhHHHHHHHHHHHHhh
Q 021342 294 GAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 294 G~~~~i~~~~~l~~~~~~ 311 (314)
++.+++.+. ..+|+.|-
T Consensus 261 ~i~~i~~~~-~~g~l~dr 277 (418)
T TIGR00889 261 QFSEIFFIL-TIPFFLKR 277 (418)
T ss_pred HHHHHHHHH-HHHHHHHH
Confidence 988888764 66676653
No 85
>PTZ00207 hypothetical protein; Provisional
Probab=99.35 E-value=9.4e-11 Score=115.16 Aligned_cols=131 Identities=14% Similarity=0.132 Sum_probs=95.2
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc------hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
..++.+++++|++.||+|||+++.++.+.+.+..+.. +. ++.+.+++.|++.|+|.+..+++....+.++
T Consensus 72 ~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~--- 148 (591)
T PTZ00207 72 IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSV--- 148 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 4556777889999999999999999998887655442 33 5788999999999999998887776666665
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHH-HHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFV-GNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
++++||++.|+......+|.++ +++...++. + +|++.+++......+++++...++++++.
T Consensus 149 --------Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~------~~~~~fl~l~vl~~vv~ll~~~~vr~p~~ 210 (591)
T PTZ00207 149 --------FPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-D------NTSAYFFFLMSFALVVGILAIVFMRLPPF 210 (591)
T ss_pred --------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H------hHHHHHHHHHHHHHHHHHHHHhheeCCcc
Confidence 3589999999999999999975 555555443 2 25554444433333445555566776643
No 86
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.35 E-value=3.6e-10 Score=109.36 Aligned_cols=140 Identities=9% Similarity=-0.029 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHh-hchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRV-LGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~-~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 140 (314)
...+.......++++++|+++|| +|||+++.++.+++++..+.. +.++.+.++.+|++.|+|.|...+...+++++..
T Consensus 52 ~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~ 131 (475)
T TIGR00924 52 IIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLY 131 (475)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhc
Confidence 34567777888889999999999 899999999999887655543 5567777888999999999999888888888876
Q ss_pred hhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 021342 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (314)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 215 (314)
++ .++++|++++++++...++|..+||++++.+.++. +|++.+ .+..+..+++.+.+++.++
T Consensus 132 ~~-------~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-----g~~~~f-~~~~~~~~~~~l~~~~~~~ 193 (475)
T TIGR00924 132 ER-------GDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-----GYHVGF-NLAAVGMVIGLLTFFAGRH 193 (475)
T ss_pred CC-------CCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-----ChHHHH-HHHHHHHHHHHHHHHHccc
Confidence 21 01135888999999999999999999999887653 476543 3334444445544444443
No 87
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.34 E-value=3.2e-11 Score=117.82 Aligned_cols=141 Identities=19% Similarity=0.210 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
.-.+..+++-+++++++++++|++|||++++++.+.|.+..+. .+++|...++++|++.|+|.|........|++|++
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEia- 171 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIA- 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcC-
Confidence 3367888888999999999999999999999999999886666 47889999999999999999999888999999987
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
|++.||...+.+......|..+|.+++....+. . .+||..+++. .+.+++..+..+++||+++
T Consensus 172 ---------p~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~---~~Wr~~~~~~-~i~~~~~~~~~~~~pesp~ 234 (513)
T KOG0254|consen 172 ---------PAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-Y---AGWRIPLGLA-LIPAVILALGMLFLPESPR 234 (513)
T ss_pred ---------ChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-C---ccHHHHHHHH-HHHHHHHHHHHHhCCCChH
Confidence 778999999999998888888886666554322 0 2587544433 3333433334778888653
No 88
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.32 E-value=2.1e-10 Score=109.75 Aligned_cols=140 Identities=20% Similarity=0.182 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh----hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~----~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
..+++.++..+|++++++++|++|||.++.++.+...+.... ...++...++.+|++.|+..+.....+.-|++|+
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~ 144 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEI 144 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 367888888899999999999999999999888765443322 3457889999999999999999999999999998
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHH-HHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA-VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
+ |.+.||........+..+|..+|..++.- +..+ ...|+ .++....+.+++..++..++||+++
T Consensus 145 s----------P~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt----~~~W~-~l~~~~~i~~~~~l~~l~~~PESPk 209 (485)
T KOG0569|consen 145 S----------PKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGT----EDLWP-YLLAFPLIPALLQLALLPFLPESPK 209 (485)
T ss_pred C----------hhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCC----CcchH-HHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 7 78999998777777777777777665432 2111 12363 3344445555667777788999653
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.32 E-value=4.4e-10 Score=110.08 Aligned_cols=149 Identities=10% Similarity=0.047 Sum_probs=97.5
Q ss_pred hhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhh
Q 021342 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASII 128 (314)
Q Consensus 50 l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~ 128 (314)
+-.+++.+++...++ ....+..++++.+.|.++|.+|||+.++.+.+.+.+-.+. .-++|..+++++.++.|+|+|..
T Consensus 70 I~~diG~~~~~~w~~-~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~ 148 (599)
T PF06609_consen 70 INADIGGSDNWSWFS-TAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQ 148 (599)
T ss_pred HHHhcCCCccchHHH-HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHH
Confidence 334444444444443 3455678888899999999999999999999988775554 57899999999999999998876
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
.... ..++|.. |.+.|+...++...........|+.++..+..+ .+|||.+|+. ++...++++
T Consensus 149 ~~~~-~~isEl~----------p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~-----~~WRw~~~~~-~i~~~i~~v 211 (599)
T PF06609_consen 149 ELAA-LAISELV----------PNKWRGLGLAIASIPFIITTWISPLIAQLFAAH-----SGWRWIFYIF-IIWSGIALV 211 (599)
T ss_pred HHHH-HHHHHhc----------ccchhhhHhHHHHHHHHhhhcccHHHHHHhccC-----CCcchHHHHH-HHHHHHHHH
Confidence 4332 2355554 567777666555444444444567776555433 2698875554 444444443
Q ss_pred H-HHhccCC
Q 021342 209 L-MCFLRKE 216 (314)
Q Consensus 209 l-~~~l~~~ 216 (314)
+ ++|..+|
T Consensus 212 l~~~fY~PP 220 (599)
T PF06609_consen 212 LIFFFYFPP 220 (599)
T ss_pred HHHHHhCCC
Confidence 3 3444443
No 90
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.32 E-value=4.2e-10 Score=109.74 Aligned_cols=221 Identities=13% Similarity=0.032 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh--h----hchhhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA--N----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~--~----~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
.....+-..+.++++|.++||+.||++|+.+-+...+..+. . -..+.+.+++..++.|++.+...++..+++.+
T Consensus 51 ~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~ 130 (524)
T PF05977_consen 51 QAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPE 130 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777788889999999999999999988765432221 1 12467788889999999999999998888888
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
.. |+++..+++++.....+++.++||.+++.+....+ - ...|.+-.+.-++.++.....+++..
T Consensus 131 lV----------~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-----~-~~~f~inalsfl~~i~~l~~~~~~~~ 194 (524)
T PF05977_consen 131 LV----------PKEDLPAANALNSISFNIARIIGPALGGILVAFFG-----A-AAAFLINALSFLISILALLRWKPPPP 194 (524)
T ss_pred hc----------cHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-----H-HHHHHHHHHHHHHHHHHHHHcccccc
Confidence 76 56889999999999999999999999998876432 1 22244333332333333333433222
Q ss_pred ccccccccccccccchHHHHHHHHHHhhc-ChhHHHHHHHHHHHhHHHhhhhcccccccc-ccccccchhhHHHHHHhhH
Q 021342 219 KGEKETADASVNFYSYLVSLSKSITTLLA-DVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAF 296 (314)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~lll~p~~~~~g~~~~f~~~~~~~~~~-~~~lg~~~ig~~~~~~G~~ 296 (314)
+++. +++++.+.+++=++..+ +|.+.......+..++..+.....+|-... ....|....|++++++|+.
T Consensus 195 ~~~~--------~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvG 266 (524)
T PF05977_consen 195 PSSL--------PRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVG 266 (524)
T ss_pred cccc--------chhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 1111 12234444555444444 555554444444455555555666663322 2346688889999999999
Q ss_pred hHHHHHHHHHHHHh
Q 021342 297 DAIFLVELLLRWLY 310 (314)
Q Consensus 297 ~~i~~~~~l~~~~~ 310 (314)
.+++++ ++.|+-+
T Consensus 267 ai~Gal-~~~~l~~ 279 (524)
T PF05977_consen 267 AILGAL-LLPRLRR 279 (524)
T ss_pred HHHHHH-HHHHhhc
Confidence 999887 4555543
No 91
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.26 E-value=1.6e-10 Score=116.68 Aligned_cols=136 Identities=11% Similarity=-0.002 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
.+..++..++++++++++||+|||++++++.++.++..+.. +.++...+++.+++.|++.+..|++...+++++.
T Consensus 602 ~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~---- 677 (742)
T TIGR01299 602 FLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY---- 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----
Confidence 34445667788899999999999999999988877665543 5566677777888999999889988888889886
Q ss_pred hhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
|.++|++++|+..+...+|.++||++++.+.... ....++++.++.+++.++.+++||+..
T Consensus 678 ------Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-------~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 678 ------PSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-------KAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 6789999999999999999999999988765432 233455555666666677777887654
No 92
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.24 E-value=2.9e-10 Score=89.74 Aligned_cols=131 Identities=17% Similarity=0.144 Sum_probs=98.4
Q ss_pred HHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhc
Q 021342 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (314)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~ 147 (314)
.....+++++.+++.||+|||+.+..+.....+..... ..++.+.++..+++.|++.+..++....++.+..
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------- 80 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY------- 80 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC-------
Confidence 34556677888999999999999998887776554443 5577788888999999999988888777788775
Q ss_pred CCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHH-hccC
Q 021342 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRK 215 (314)
Q Consensus 148 ~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~ 215 (314)
++++|++..++.......|..+||.+.+.+.+.. +|++. |.+...+.+++.+... +.||
T Consensus 81 ---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 ---PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-----GWRAP-FLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ---ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-----chHHH-HHHHHHHHHHHHHHHhhcCCC
Confidence 5689999999999999999999999998886543 46544 4444444444444443 3443
No 93
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.6e-09 Score=99.90 Aligned_cols=207 Identities=14% Similarity=0.168 Sum_probs=136.6
Q ss_pred hhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh----hchhhhHHHHHHHHhhhh
Q 021342 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN----LFPSWYTMVPASLYLGFA 124 (314)
Q Consensus 49 ~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~----~~~~~~~l~~~r~l~G~g 124 (314)
.+++..+.+......-...+|.+|.+.+++++.+.+|+|+|..+++|+.+|++....+ ...++...+.+-++.|.|
T Consensus 38 ~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~G 117 (422)
T COG0738 38 HLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASG 117 (422)
T ss_pred HHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhh
Confidence 3344444444444444678899999999999999999999999999999998755544 235788888888999999
Q ss_pred hhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC-----C-C--------CCCC
Q 021342 125 ASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-----K-G--------GSTS 190 (314)
Q Consensus 125 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~-----~-~--------~~~~ 190 (314)
.+.+-++...|++... ++++..+++++-..++.+|.++||+++..+..+. + . .-.+
T Consensus 118 i~~LetaaNp~v~~lg----------~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~ 187 (422)
T COG0738 118 IGLLETAANPYVTLLG----------KPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASS 187 (422)
T ss_pred hHHHHhccchHHHHhC----------CchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHh
Confidence 9999999999999987 4567788899999999999999999977665421 0 0 0011
Q ss_pred chhHHHHHHHHHHHHHHHHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHH-HHHHHHhHHHhhhh
Q 021342 191 GTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLII-PLFAYSGLQQAFVW 269 (314)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~-p~~~~~g~~~~f~~ 269 (314)
+ +..|..+....++..+.....|.|+.+...+ ++ .++++. ...+.+++|+..+-. -.++|.|.+.+..
T Consensus 188 v-~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~-~~---~~~~~~-----~~~~l~~~~~~~~gvl~~FlYVG~Eva~g- 256 (422)
T COG0738 188 V-QFPYLILAGLLVLLAVLILLSKLPDLQVAAP-SL---GASGSA-----GLSSLFQNKHLRLGVLAIFLYVGAEVAIG- 256 (422)
T ss_pred h-hhHHHHHHHHHHHHHHHHHhccCCcCCcccc-cc---cccccc-----hHHHHHhChHHHHHHHHHHHHHhHHHHHH-
Confidence 3 2345554444333333333334333222111 00 011110 123466777776644 6788999988774
Q ss_pred ccccccc
Q 021342 270 AEFTKEI 276 (314)
Q Consensus 270 ~~~~~~~ 276 (314)
++++++.
T Consensus 257 sfl~~y~ 263 (422)
T COG0738 257 SFLVSYL 263 (422)
T ss_pred HHHHHHH
Confidence 4555444
No 94
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.23 E-value=6.1e-09 Score=98.16 Aligned_cols=132 Identities=12% Similarity=0.048 Sum_probs=78.8
Q ss_pred HHHHHHHHhhHHHHHHhhchhhHHH-HHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhh
Q 021342 69 YTSFTCFSLVASLVVRVLGSKNALI-LGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (314)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~G~k~~l~-~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~ 146 (314)
...+.++++++++ +||+|||+.++ .+.+...+.... .+.++++.++..+.+.|...+..++....+..+..
T Consensus 62 ~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------ 134 (393)
T PRK15011 62 VIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHA------ 134 (393)
T ss_pred HHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh------
Confidence 3455566666666 99999998754 444443333332 25567776655555555444555555544454443
Q ss_pred cCCCCccch--hhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHH-HHHHHhccCCc
Q 021342 147 HKLHEGTVI--GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG-TILMCFLRKEE 217 (314)
Q Consensus 147 ~~~~~~~~r--g~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~ 217 (314)
++++| +...++..+..++|.++||.+++.+.++. +||.. |++..+..++. ++..+++||++
T Consensus 135 ----~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~-----gw~~~-f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 135 ----DKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF-----SFTVM-YLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred ----hhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-----ChHHH-HHHHHHHHHHHHHHHHhhcCccC
Confidence 22223 44557777888999999999999887654 58754 44444444433 33345577653
No 95
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.22 E-value=1.8e-09 Score=102.66 Aligned_cols=229 Identities=11% Similarity=0.009 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHh----hch-hhHHHHHHHHHHHHHHhh-hchh------hhHHHHHHHHhhhhhhhhhc
Q 021342 63 ISLGILYTSFTCFSLVASLVVRV----LGS-KNALILGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWV 130 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~----~G~-k~~l~~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~~~~~~ 130 (314)
...++..+..++.+++.|.++|| +|| |+.++++...+++..+.. ..++ ...++..+++.|++.+...+
T Consensus 39 ~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (437)
T TIGR00792 39 TLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNI 118 (437)
T ss_pred HHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcc
Confidence 33566667888999999999997 677 456777777666544432 3332 34555677888888877655
Q ss_pred cchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC--CCCCCchhHHHHHHHHHHHHHHH
Q 021342 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
+..++..+.. ++++||++..++-.....+|..+++.+.+.+....+ ....+|++. +++..+++++..+
T Consensus 119 ~~~al~~~~~---------~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~-~~i~~~l~~~~~~ 188 (437)
T TIGR00792 119 PYWSLVPAIT---------LDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMF-ALVLALIGVVSLI 188 (437)
T ss_pred cHhhCccccc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHH-HHHHHHHHHHHHH
Confidence 5555555554 246899999888777777777776665544443211 112356543 3333444333333
Q ss_pred H-HHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccc-cchh
Q 021342 209 L-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGV 286 (314)
Q Consensus 209 l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg-~~~i 286 (314)
+ .++++|++++++++ .+++.+.++.+| +.+++|.++.+....+...+........ ..++....++ ....
T Consensus 189 ~~~~~~~e~~~~~~~~-----~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 259 (437)
T TIGR00792 189 ICFFGTKERYSEIPKN-----IEKKLSLKQIFK---ALFKNDQLLILCLAYLFYNLAFNIKNGV-QVYYFTYVLGDPELF 259 (437)
T ss_pred HHHcCCEecCCCCCcc-----cccCCCHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHcch-hheeEeeecCChHHH
Confidence 3 34566643221111 011223444444 3567777766554443333322222222 2233332333 3445
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
+....+.++..++++. ..+++.|-
T Consensus 260 ~~~~~~~~i~~ii~~~-~~~~l~~r 283 (437)
T TIGR00792 260 SYMGSIAIVAGLIGVL-LFPRLVKK 283 (437)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 5555555555555443 44555543
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.19 E-value=9e-09 Score=100.30 Aligned_cols=123 Identities=8% Similarity=-0.003 Sum_probs=88.3
Q ss_pred HHHHHHhhHHHHHHh-hchhhHHHHHHHHHHHHHHhh-hc-hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhc
Q 021342 71 SFTCFSLVASLVVRV-LGSKNALILGTTGYWLFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~-~G~k~~l~~g~~~~~~~~~~~-~~-~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~ 147 (314)
.....++++|+++|| +|||++++++.+++.+..... +. ++...++++|++.|+|.|...+...+++++..++
T Consensus 69 ~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~----- 143 (500)
T PRK09584 69 LVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK----- 143 (500)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC-----
Confidence 334445679999999 599999999998887644433 43 3455667789999999998888777788887621
Q ss_pred CCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH
Q 021342 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (314)
Q Consensus 148 ~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (314)
++++|+.++++++...++|..+||++++.+.++. +|++.++ +..+...+++
T Consensus 144 ---~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-----g~~~~F~-i~~i~~~i~~ 194 (500)
T PRK09584 144 ---DDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-----GWSVAFA-LSVVGMLITV 194 (500)
T ss_pred ---CchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-----CHHHHHH-HHHHHHHHHH
Confidence 2234566789999999999999999999987654 4865543 3333333333
No 97
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.19 E-value=2.9e-09 Score=103.48 Aligned_cols=233 Identities=15% Similarity=0.055 Sum_probs=148.2
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHH-hhhchhh-hHHHHHHHHhhhhhhhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANLFPSW-YTMVPASLYLGFAASII 128 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~-~~~~~~~-~~l~~~r~l~G~g~~~~ 128 (314)
+++.+.+.....+..++...+..+++++.+.+.||+|.|.+.++|.+...+..+ +.+.++. ..++...++.|+|.|..
T Consensus 73 ~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~ 152 (509)
T KOG2504|consen 73 MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLI 152 (509)
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhh
Confidence 344444444344556788888888899999999999999999999998876444 4566665 46667889999999999
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
+...-.++..+ ++++|+.+.|+-.+...+|.++=|.+.-.+.... +||+...+. ..+.+-.++
T Consensus 153 ~~paiviv~~Y-----------F~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~-----G~r~~~l~~-~~~~l~~~~ 215 (509)
T KOG2504|consen 153 YLPAVVILGTY-----------FEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY-----GWRGALLIF-GGISLNVLV 215 (509)
T ss_pred hcchhhhhhhH-----------hHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-----CcHHHHHHH-HHHHHHHHH
Confidence 99988888876 4689999999998888888877777766666654 587765443 333333334
Q ss_pred HHHhccCCc-cc--c--------------------ccccccc---c----------ccccchH---HHHHHHH---HHhh
Q 021342 209 LMCFLRKEE-DK--G--------------------EKETADA---S----------VNFYSYL---VSLSKSI---TTLL 246 (314)
Q Consensus 209 l~~~l~~~~-~~--~--------------------~~~~~~~---~----------~~~~~~~---~~~~~~~---~~~l 246 (314)
..+.+++.. +. + ++..++. . ...++.. .++-... .+++
T Consensus 216 ~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll 295 (509)
T KOG2504|consen 216 AGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLL 295 (509)
T ss_pred HHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHH
Confidence 444444411 10 0 0000000 0 0000000 1111111 4678
Q ss_pred cChhHHHHHHH--HHHHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHHHHH
Q 021342 247 ADVRMLLIIPL--FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 247 ~~~~~lll~p~--~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~ 302 (314)
+|+.++.+... +.+.|+..-+. .+|.+..+..+..++..+.+.+.|+++.++-+
T Consensus 296 ~~~~fl~~~~~~~~~~~g~~~p~~--~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi 351 (509)
T KOG2504|consen 296 KDPKFLLLALSNLFAYLGFNVPFV--YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRI 351 (509)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHH--HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhh
Confidence 88877776533 33344333222 34434345567788889999999999998665
No 98
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.19 E-value=7.3e-09 Score=100.14 Aligned_cols=229 Identities=11% Similarity=0.031 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhc-----hhhHHHHHHHHHH-HHHHhh-hchhhhHHH-HHHHHhhhhhhhhhccchhhH
Q 021342 65 LGILYTSFTCFSLVASLVVRVLG-----SKNALILGTTGYW-LFVAAN-LFPSWYTMV-PASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G-----~k~~l~~g~~~~~-~~~~~~-~~~~~~~l~-~~r~l~G~g~~~~~~~~~~~i 136 (314)
.++.++.+.+-.+ +++++|+++ ||+.++++.+... +..... ..++..... ...++.+++.+..-++.-++.
T Consensus 67 ~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~ 145 (468)
T TIGR00788 67 VGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLY 145 (468)
T ss_pred HHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5777888888666 999999998 8888888876652 221111 224433333 377889999988877777777
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
.|..++ +++.++...+..|.....|.++|+.+++.+.+.. +|+.. |.+..++.++..+..++++|+
T Consensus 146 ~e~~~~--------~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~-----~~~~~-f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 146 SERIRE--------SPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT-----LTRIL-FLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred hhhhhc--------CCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc-----CcchH-HHHHHHHHHHHHHHHHhcccc
Confidence 776521 2344455666777778899999999999887654 47654 434444444444445677886
Q ss_pred cc-cccccccc-------ccccccchHHHHHHHHHHhhcChhHHHHHH-HHH-HHhHHHhhhhccccccccccccccchh
Q 021342 217 ED-KGEKETAD-------ASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFA-YSGLQQAFVWAEFTKEIVTPALGVSGV 286 (314)
Q Consensus 217 ~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~lll~p-~~~-~~g~~~~f~~~~~~~~~~~~~lg~~~i 286 (314)
+. .+++..++ .......+.++.+++..+.+++|.+..... .++ +. ...+.....|-.......++++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~-~~~~~~~~~f~~~~~~lG~s~~~~ 290 (468)
T TIGR00788 212 RAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYA-NLPGASGSVFCATTQCLPGGPSFS 290 (468)
T ss_pred cccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHh-hcCCCCceeEEEEcccCCCCcchh
Confidence 41 11110000 000001123455666777788877765332 222 22 111111111111112345779999
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
|.+..+.|+.+++++. +.+|+.|
T Consensus 291 G~~~~~~~v~~i~g~~-~~~~~~~ 313 (468)
T TIGR00788 291 GMSKVVGNLGSLCGVG-GYDRFLK 313 (468)
T ss_pred hhHHHHHHHHHHHHHH-HHHHHHh
Confidence 9999999988888665 5666554
No 99
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.19 E-value=1.3e-09 Score=103.83 Aligned_cols=144 Identities=15% Similarity=0.247 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h-ch---hhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-FP---SWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~-~~---~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
.++..+...++.++.+.++||+|+|+++.++.+++.+..... . .+ +...+++.+++.|++.+...+....++++.
T Consensus 257 ~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~ 336 (418)
T TIGR00889 257 MSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKE 336 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556666777889999999999999999998876643332 2 22 235667789999999998877777777877
Q ss_pred hhhhhhhcCCCCccchhhHHHHHH-HHHhhhhHHHHHHHHHHHcCCCC-CCCCchhHHHHHHHHHHHH-HHHHHHhccCC
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDKG-GSTSGTTLLFIVFLGVITL-GTILMCFLRKE 216 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~-~~~~~g~~~G~li~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~ 216 (314)
. |+++|++.+|++. ....+|.++||++++.+.+..+. ...+|+.. |.+.+++.++ +++..++++|+
T Consensus 337 ~----------p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~-f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 337 V----------PVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTM-WLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred C----------CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHH-HHHHHHHHHHHHHHHHHHhCCc
Confidence 5 6789999999996 66889999999999988765421 11257544 4444444444 44555678877
Q ss_pred ccc
Q 021342 217 EDK 219 (314)
Q Consensus 217 ~~~ 219 (314)
.+.
T Consensus 406 ~~~ 408 (418)
T TIGR00889 406 HNA 408 (418)
T ss_pred ccC
Confidence 543
No 100
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.17 E-value=1.6e-08 Score=95.09 Aligned_cols=143 Identities=11% Similarity=0.016 Sum_probs=85.3
Q ss_pred ccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccccc
Q 021342 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNF 231 (314)
Q Consensus 152 ~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 231 (314)
+++++...+.......+|.++|+...+.+.++. +|+.. |++..++.++..+..++++|+++++++. +
T Consensus 128 ~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~-----gw~~~-f~~~a~l~~~~~~~~~~~~~~~~~~~~~-------~ 194 (390)
T TIGR02718 128 GRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF-----GQRPA-FLLVACVPLASLVCVLWLKDRAVASPEA-------P 194 (390)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CHHHH-HHHHHHHHHHHHHHHHHcCCCCcCcccc-------c
Confidence 345566666666666777777777666666554 48654 5555555555444445555433221110 0
Q ss_pred cchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHHHHHHHHHHHHhh
Q 021342 232 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLVELLLRWLYF 311 (314)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~~ 311 (314)
+ +..++..+.+|+|+.+......+......+..++..+.+..+..++.+++|..+.+.|....+.+....+|+.|-
T Consensus 195 ~----~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r 270 (390)
T TIGR02718 195 L----ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR 270 (390)
T ss_pred h----hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 0 011234456788877666655555545445555666655555568899999999998887777666667777653
No 101
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.16 E-value=3.2e-09 Score=98.40 Aligned_cols=227 Identities=14% Similarity=0.077 Sum_probs=138.6
Q ss_pred CccccccchhhhhHHHHHHHHHHHhhHhhhhhhcCCCChhHHH----HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHH
Q 021342 22 TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTT 97 (314)
Q Consensus 22 n~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~~~g~~~----~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~ 97 (314)
+.+...+|..+-.+++...|..+.....+...++++.++.... .++-.+.-++..++-+.+.||+|.|++..++.+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 5557888888888888888988888777777776655554433 334445556666788999999999999999987
Q ss_pred HHHH--HHHhh--hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHH
Q 021342 98 GYWL--FVAAN--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (314)
Q Consensus 98 ~~~~--~~~~~--~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G 173 (314)
...+ +.... -+++.+.+++.++++|++.+..-++. .+++.++ |++++|.++|++. ..++|..+-
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m-~~~s~~f----------P~~~qG~AlGI~g-~GN~G~av~ 155 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGM-PNASFFF----------PKEKQGLALGIAG-AGNLGVAVA 155 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehccc-ccccccC----------ChhhhhHHHHHhc-cccccHHHH
Confidence 7543 22222 34566799999999999999775544 3566665 7899999999998 888887665
Q ss_pred HHHHHHHHcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccCCccccccccccccccccchHH-HHHHHHHHhhcChhH
Q 021342 174 NLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDKGEKETADASVNFYSYLV-SLSKSITTLLADVRM 251 (314)
Q Consensus 174 ~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 251 (314)
.+++-.+....+. ..|+.... +.....++ ++...+++.+.+..|.+. ++.+ .++| ...++++.
T Consensus 156 q~~~P~v~~~~g~--~~w~~~~~-i~~~~l~v~~v~~~~~~~d~p~~r~~~---------~~~~~~~~~---~v~~~~~~ 220 (417)
T COG2223 156 QLVAPLVAVAFGF--LAWRNVAG-IYVVALAIAAVLAWLGMNDVPEHRASV---------KPQLPAQLK---AVFSNKDT 220 (417)
T ss_pred HHHHHHHHHHHhh--HHHHHHHH-HHHHHHHHHHHHHHHHhCCChhhhccc---------cccchhHHH---HHhcCcch
Confidence 5554444332210 01543322 22233333 444445565543322111 0111 2233 35567777
Q ss_pred HHHHHHHHHH-hHHHhhhhccccccc
Q 021342 252 LLIIPLFAYS-GLQQAFVWAEFTKEI 276 (314)
Q Consensus 252 lll~p~~~~~-g~~~~f~~~~~~~~~ 276 (314)
+.+...++.+ |-+.+| ...+|.++
T Consensus 221 W~lsllY~~tFG~Fvgf-s~~l~~~~ 245 (417)
T COG2223 221 WLLSLLYFATFGGFVGF-SAYLPMYL 245 (417)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 7776554433 333333 34444443
No 102
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.11 E-value=1.2e-08 Score=92.97 Aligned_cols=228 Identities=10% Similarity=0.066 Sum_probs=155.7
Q ss_pred hhHhhhhhhcCCCChhHHH----HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHh
Q 021342 46 AAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYL 121 (314)
Q Consensus 46 ~~~~l~~~i~~~~~~g~~~----~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~ 121 (314)
+...+.+++..|.++.+.. .++=.+++++.+++++++.+|+|.++.+..+++..++-.+.-...+.+.++.+-.+.
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~ 109 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLA 109 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3334455555455554433 345558999999999999999999999999998877666654344677788888999
Q ss_pred hhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHH
Q 021342 122 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLG 201 (314)
Q Consensus 122 G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~ 201 (314)
|.|.+...+--...+-+. ++++-+..+|+|....+.|..+++.+.--+.++. .+|+..+. ....
T Consensus 110 G~gIav~nVLLPslIK~~-----------Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~----~gW~~aL~-~WAl 173 (395)
T COG2807 110 GAGIAVINVLLPSLIKRD-----------FPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS----GGWRGALG-FWAL 173 (395)
T ss_pred HhhHHHHHHhhhHHHHhh-----------cccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh----ccHHHHHH-HHHH
Confidence 999998655544444432 5789999999999999999999999888887765 25876432 2233
Q ss_pred HHHHHHHHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccccccccccc
Q 021342 202 VITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL 281 (314)
Q Consensus 202 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~l 281 (314)
.++++.+.. +|...+.+... ...+ .++..+.+|+|.-+.+...+-..++..-...+++|+.+.+..+
T Consensus 174 ~allAl~~W--lPq~~r~~~~~----~~~~-------~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~ 240 (395)
T COG2807 174 LALLALLIW--LPQALREQAAS----IATK-------LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGL 240 (395)
T ss_pred HHHHHHHHH--hhhcccccccc----cccc-------cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC
Confidence 334444333 44432211000 0000 0112246788877777665555556666677889999999999
Q ss_pred ccchhhHHHHHHhhHhHHHHH
Q 021342 282 GVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 282 g~~~ig~~~~~~G~~~~i~~~ 302 (314)
+..+.|.......+.++..++
T Consensus 241 sa~~aG~llsl~~l~~~~~~l 261 (395)
T COG2807 241 SAAEAGSLLSLMQLAQLPTAL 261 (395)
T ss_pred CHHHhhhHHHHHHHHHHHHHH
Confidence 999999988888888877664
No 103
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.10 E-value=3.8e-09 Score=99.39 Aligned_cols=136 Identities=16% Similarity=0.108 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.+...+...++.++.+.+.||+|+|+.+..+..+..+.... ...++.+.+++..++.|++.+..++.......+..
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~--- 331 (399)
T PRK05122 255 LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRV--- 331 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC---
Confidence 44556667778888999999999999998887766554433 24566667778889999999887766554444443
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
++++||+..+++.....+|..+|+.+.+.+.+.. +|+.. |+...++.+++.+...+++++
T Consensus 332 -------~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 332 -------PPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-----GYPSI-FLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CHHHH-HHHHHHHHHHHHHHHHHhccc
Confidence 6789999999999999999999998888776643 35443 444555555666555555553
No 104
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.10 E-value=1.1e-08 Score=96.49 Aligned_cols=134 Identities=13% Similarity=-0.009 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
++..+...+++++.+.++||+|||+.+..+.....+..... ..++...++..+++.+++.+...+....+..+..
T Consensus 259 ~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~---- 334 (393)
T PRK15011 259 GTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLM---- 334 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 44455566778899999999999998887765544333222 3456666667888888877766554445555543
Q ss_pred hhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
+++||++.+++....++|..+||++++.+.+.. +|+.. +.+..++.+++.+..+++||+
T Consensus 335 -------p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T PRK15011 335 -------PGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-----NYHAV-FWFALVMIIATLFCLLRIKDV 393 (393)
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHH-HHHHHHHHHHHHHHHHhhcCC
Confidence 357999999999999999999999999887653 36443 444455556666666666653
No 105
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.07 E-value=5.6e-09 Score=98.41 Aligned_cols=135 Identities=16% Similarity=0.029 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
..+...+...++.++.+++.||+|||+.+..+.+...+.... ...++...++...++.|++.+...+...++..+..
T Consensus 260 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-- 337 (406)
T PRK11551 260 VQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFY-- 337 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc--
Confidence 345566677788889999999999999988766554443333 24455556666777788877665555555555554
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 213 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 213 (314)
|+++|++..|+......+|..+||.+.+.+.++.. ++ ...+.+...+.+++.++.+.+
T Consensus 338 --------p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 338 --------PTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR----ST-VGVIGASIPVILVAALAALLL 395 (406)
T ss_pred --------chhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC----ch-HHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999988876432 23 333444444555555554444
No 106
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.05 E-value=1.4e-08 Score=98.63 Aligned_cols=139 Identities=10% Similarity=0.052 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh---h-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA---N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~---~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 140 (314)
.....++..++++++++++||+|||++++++.+...+.... . ..++...+++++++.|++.+..+.....++.+.+
T Consensus 292 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 371 (490)
T PRK10642 292 IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMF 371 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 44555666777888999999999999998887654322221 1 1234566777888888877666555556666654
Q ss_pred hhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
|++.||+.+|..+.....+..++|.+.+.+....+ +|+...++ ..+.++++.+..+++||+++
T Consensus 372 ----------p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~----~~~~~~~~-~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 372 ----------PTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ----NLMMPAYY-LMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred ----------CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CchHHHHH-HHHHHHHHHHHHHHhccccC
Confidence 77899999997555555666778887776654321 35444333 34445555556667788654
No 107
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.03 E-value=2.9e-08 Score=92.13 Aligned_cols=130 Identities=9% Similarity=0.051 Sum_probs=91.5
Q ss_pred HHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhc
Q 021342 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (314)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~ 147 (314)
......+.++.+++.||+|||+++.++.+...+..... ..++.+.++..+++.|++.+..++....+..+..
T Consensus 245 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~------- 317 (375)
T TIGR00899 245 AGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLM------- 317 (375)
T ss_pred HHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------
Confidence 33445566788999999999999888776554433332 4456677777888899988877665555555542
Q ss_pred CCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 021342 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (314)
Q Consensus 148 ~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 215 (314)
++++++.++++....++|..+||.+++.+.+.. +|+. .|....++.+++.++..+++|
T Consensus 318 ----~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 318 ----PGRAGAATTLYTNTGRVGWIIAGSVGGILAERW-----SYHA-VYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred ----cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cchh-HHHHHHHHHHHHHHHHheecC
Confidence 356789999999999999999999998887654 3543 355555555666666555543
No 108
>PRK12382 putative transporter; Provisional
Probab=99.02 E-value=1.5e-08 Score=95.22 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.+.......+++++.+.+.||+|+|+.+..+.....+..... ..++...+++..++.|++.+...+.....+.+..
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~--- 331 (392)
T PRK12382 255 LTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRV--- 331 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc---
Confidence 344445566788889999999999999988887665544333 4566777777889999998877666555555543
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (314)
++++||+..|++.....+|..+||.+.+.+.++. +|+. .|....++.+++.++..+
T Consensus 332 -------~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-----g~~~-~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 332 -------PSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-----GYPS-VFLAGAISAVLGIIVTIL 387 (392)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CchH-HHHHHHHHHHHHHHHHHh
Confidence 6789999999999999999999999999887654 3654 355555555555555443
No 109
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.01 E-value=1.8e-08 Score=91.87 Aligned_cols=131 Identities=21% Similarity=0.210 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhh-HHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKN-ALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~-~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.+.......++.++.+++.||+|||+ .+..+.....+..... ..++...+++..++.|++.+..++....++.+..
T Consensus 217 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-- 294 (352)
T cd06174 217 LSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELA-- 294 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhc--
Confidence 45555667778888899999999999 9988888776655543 5566777888999999999999888888888775
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
|+++|++.++++......|..+|+.+.+.+.+.. +|+.. +++..++.+++.++.+
T Consensus 295 --------~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-----~~~~~-~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 295 --------PPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-----GYGGV-FLILAALALLAALLLL 349 (352)
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----CcchH-HHHHHHHHHHHHHHhe
Confidence 6689999999999999999999999998887543 35433 4455555555555443
No 110
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.00 E-value=4.1e-08 Score=92.18 Aligned_cols=128 Identities=8% Similarity=0.004 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
++..+...++.++++.+.||+|+|+.+.++.+...+..... +.++.+.+++..++.|++.+..+++...++.+.
T Consensus 247 ~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~----- 321 (382)
T TIGR00902 247 GIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ----- 321 (382)
T ss_pred HHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 34444555556678899999999999999998887655544 678888888899999999999988866666543
Q ss_pred hhcCCCCccchhhHHHHHH-HHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 021342 145 SNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~-~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
|+++|++..+++. ....+|..+||++++.+.++.+ . ..|....++++++.++..
T Consensus 322 ------~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-----~--~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 322 ------PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-----A--GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred ------CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----H--HHHHHHHHHHHHHHHHHH
Confidence 5678899999986 4678999999999999987642 2 335555666666655443
No 111
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.99 E-value=2.7e-08 Score=96.11 Aligned_cols=179 Identities=13% Similarity=0.121 Sum_probs=128.9
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhhhhhcC-CCChhHH----HHHHHHHHHHHHHhhHHHHHHhhchh--hHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSK--NALILGTT 97 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~-~~~~g~~----~~~~~~~~~~~~~~~~~~l~~~~G~k--~~l~~g~~ 97 (314)
++.|++...-++.+++..+.++...+...... +-+.+.. ..-+..++-.+|+++.+.+.||+|.| ++++++.+
T Consensus 278 ~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 278 RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 67788888888888888887776644432221 1122221 12344566678888999999999999 88888888
Q ss_pred HHHHHHH-hhh--------chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhh
Q 021342 98 GYWLFVA-ANL--------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (314)
Q Consensus 98 ~~~~~~~-~~~--------~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~ 168 (314)
.+.+..+ +.+ .++.+.+++..++.|++.|..++..-++.++.. |+++.+.++|+|......
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~Li----------P~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLI----------PPGREAEFFGLYAITGKA 427 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhC----------CCchhhHHHHHHHHHHHH
Confidence 7744333 234 456677888899999999999999988999886 778889999999999999
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 169 HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 169 g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
+..+||++-+.+.+..+ +.|. -+....++.+++.++.++++.++.
T Consensus 428 ss~lGPll~g~i~~~tg----~~r~-g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 428 SSWLGPLLFGLITDATG----SQRY-GFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHHHHHHHHHHHHhC----Cchh-HHHHHHHHHHHHHHHHhhccchhh
Confidence 99999999888877653 2232 244444555566666666665543
No 112
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.99 E-value=4.3e-12 Score=121.37 Aligned_cols=142 Identities=17% Similarity=0.163 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hch---hhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP---SWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~---~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
...+..+++..+|++++|.++||+|||+++.++.+.+.+..+.. +.+ +++.++++|++.|++.|...+....|+.|
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E 129 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISE 129 (451)
T ss_pred HHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34678888889999999999999999999999999887766654 677 89999999999999999999999999999
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
.. |+++||+..+++.....+|..++.+++..+.... ....||.. ++...+.+++..+..+++||++
T Consensus 130 ~~----------~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~--~~~~Wr~~-~~~~~~~~l~~~~~~~~~pESP 195 (451)
T PF00083_consen 130 IA----------PPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS--DNWGWRIL-LIFGAIPSLLVLLLRFFLPESP 195 (451)
T ss_pred cc----------cccccccccccccccccccccccccccccccccc--cccccccc-cccccccccccccccccccccc
Confidence 86 7789999999988888888888887765552221 12347653 2233333334444557789864
No 113
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.97 E-value=2.3e-08 Score=92.26 Aligned_cols=110 Identities=11% Similarity=-0.053 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchh--hhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS--WYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~--~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
.++..+...+++++.+++.||+|||+.+.++.+...+..+.. ..++ ...++...++.|++.+..++....++.+..
T Consensus 246 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~- 324 (377)
T TIGR00890 246 VSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIF- 324 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHh-
Confidence 455666777888899999999999999988887665544432 3332 223445667888888877666666677765
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
++++|++..|++.....+|..+||.+.+.+.++.
T Consensus 325 ---------~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 358 (377)
T TIGR00890 325 ---------GPANSAANYGFLYTAKAVAGIFGGLIASHALTEI 358 (377)
T ss_pred ---------hhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6689999999999999999999999998887654
No 114
>PRK03699 putative transporter; Provisional
Probab=98.96 E-value=4.1e-08 Score=92.49 Aligned_cols=140 Identities=11% Similarity=0.024 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
..++..+...++.++.+.++||+|+|+.+..+.....+..... ..++...+.+..++.|++.+..++....+..+..
T Consensus 246 ~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-- 323 (394)
T PRK03699 246 LVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-- 323 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc--
Confidence 3466667888999999999999999998887665544322222 3455555556677888887766665444444332
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG 220 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 220 (314)
++++++..+....+..+|..+||.+.+.+.+.. +++..++. ..++.+++..+..++++..+++
T Consensus 324 ---------~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-----g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK03699 324 ---------KVASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-----GLQAALLT-ANGLYAVVFVMCILLGFVSKHR 386 (394)
T ss_pred ---------cCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-----Cchhhhhh-hHHHHHHHHHHHHHHHHHHHHH
Confidence 244567788888888999999999998887654 35444333 3344444444444455544443
No 115
>PRK09669 putative symporter YagG; Provisional
Probab=98.96 E-value=9e-08 Score=91.72 Aligned_cols=109 Identities=10% Similarity=0.004 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHh----hch-hhHHHHHHHHHHHHHHh-hhchh------hhHHHHHHHHhhhhhhhhhcc
Q 021342 64 SLGILYTSFTCFSLVASLVVRV----LGS-KNALILGTTGYWLFVAA-NLFPS------WYTMVPASLYLGFAASIIWVG 131 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~----~G~-k~~l~~g~~~~~~~~~~-~~~~~------~~~l~~~r~l~G~g~~~~~~~ 131 (314)
...+.-+..++..++.|.++|| +|| |+.++.+.+.+++.... +..|+ ....++..++.+.+.+...+.
T Consensus 50 i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip 129 (444)
T PRK09669 50 MFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVP 129 (444)
T ss_pred HHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcch
Confidence 3556667788888999999998 776 56666776666554433 33332 233444555666666665555
Q ss_pred chhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 132 EGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 132 ~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
..+..+++++ +++||++..+.......+|..+++.+...+.
T Consensus 130 ~~al~~~~t~---------~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 130 YCAMPGAITN---------DPRERHSLQSWRFALSFIGGLIVSVIALPLV 170 (444)
T ss_pred HHHhHHHhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666777652 4588999888888888888888877654443
No 116
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.95 E-value=1.2e-07 Score=91.51 Aligned_cols=106 Identities=10% Similarity=-0.020 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHhhHHHHHH----hhchhhHHHHHHHHH-HHHHHhh-hchhhhHHH------------HHHHHh-----
Q 021342 65 LGILYTSFTCFSLVASLVVR----VLGSKNALILGTTGY-WLFVAAN-LFPSWYTMV------------PASLYL----- 121 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~----~~G~k~~l~~g~~~~-~~~~~~~-~~~~~~~l~------------~~r~l~----- 121 (314)
..+.-+...+.+++.|.++| |+|||+.++++.... .+..... +.++...++ +...+.
T Consensus 45 ~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll 124 (477)
T TIGR01301 45 WLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL 124 (477)
T ss_pred HHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH
Confidence 44555667777888899999 599999988754333 2222221 323321110 012222
Q ss_pred hhhhhhhhccchhhHhHhhhhhhhhcCCCCccch--hhHHHHHHHHHhhhhHHHHHHHHHH
Q 021342 122 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI--GSFNGEFWGMFASHQFVGNLITLAV 180 (314)
Q Consensus 122 G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r--g~~~~~~~~~~~~g~~~G~li~~~i 180 (314)
.++.....+...++++|.. |+++| +.+.+++....++|.++|+.+++..
T Consensus 125 d~~~n~~~~p~rALiaDl~----------p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 125 DVANNMLQGPCRAFLADLT----------GGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHHHHHhccccc----------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445445556666665 44433 6789999999999999999998865
No 117
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.93 E-value=2.8e-08 Score=93.46 Aligned_cols=127 Identities=13% Similarity=0.084 Sum_probs=93.0
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcC
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~ 148 (314)
+...++.++.+.+.||+|||+.+..+.....+..+.. ..++.+.+++.+++.|++.+...+...+++.+..
T Consensus 269 l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------- 340 (408)
T PRK09874 269 VAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS-------- 340 (408)
T ss_pred HHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC--------
Confidence 4444566677899999999999998887665544433 4466677778899999999987766655555443
Q ss_pred CCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 021342 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 149 ~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (314)
++++||+.++++.....+|..+||++++.+.+.. +|++ .|++..++.+++.++.++
T Consensus 341 --~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-----g~~~-~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 341 --SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-----GFRA-VFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred --CcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-----chhH-HHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999887654 3544 455556666665555543
No 118
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.92 E-value=6.5e-08 Score=91.76 Aligned_cols=138 Identities=16% Similarity=0.187 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
+...++..++.++.+++.||.++++.+..+.++..+..+.. ..++...+++..++.|++.+...+...+++.+..
T Consensus 266 ~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---- 341 (417)
T PRK10489 266 AAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQT---- 341 (417)
T ss_pred HHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----
Confidence 44445566677788889998888888877776655444333 5567766677788889888776555555555553
Q ss_pred hhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
|++.||+.+|++....++|..+||.+.+.+.+..+ .+..+++...+..+++++....+++.++
T Consensus 342 ------p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 342 ------PDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-----PVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred ------CHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-----hhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 66889999999999999999999999998876542 3232222323333344555555666543
No 119
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.90 E-value=3.2e-07 Score=86.41 Aligned_cols=266 Identities=12% Similarity=0.076 Sum_probs=132.0
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhhhh-hcCCCChhHHHHHHHHHHHHH----HHhhHHHHHHhhchhhHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTISLGILYTSFTC----FSLVASLVVRVLGSKNALILGTTGY 99 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~-i~~~~~~g~~~~~~~~~~~~~----~~~~~~~l~~~~G~k~~l~~g~~~~ 99 (314)
++.++...++..++++|.++.......+. +++..++.....++.+.+.++ .+++.|.++||+|.|+-++......
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 55678888888888888876655533322 111234444445666655544 4455678899999777655443222
Q ss_pred ----HHHHHhhhchhh-hHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHH
Q 021342 100 ----WLFVAANLFPSW-YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (314)
Q Consensus 100 ----~~~~~~~~~~~~-~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~ 174 (314)
+.+....+.|-. ...+.+.++.|+..+..+.+.......+.+|.++..+. |--|.|.- .++|.+++.
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~f--eYG~~R~w------GSig~ai~s 155 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGF--EYGRARMW------GSIGFAIAS 155 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS---HHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcC--CcchHHHH------hhHHHHHHH
Confidence 222221122211 12233445566666666666656666666665555442 22333333 367778888
Q ss_pred HHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccc-ccccccccccccchHHHHHHHHHHhhcChhHHH
Q 021342 175 LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG-EKETADASVNFYSYLVSLSKSITTLLADVRMLL 253 (314)
Q Consensus 175 li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ll 253 (314)
.++|.+.... . ...+++..+.+++..++.++.+++..++ +.++.+. .+++ +..+|+..+++|+|+++.
T Consensus 156 ~~~G~L~~i~------p-~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~l~k~~~fw~ 224 (412)
T PF01306_consen 156 LLAGILFNIN------P-NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALG--AKKD--KVSLKDVLSLFKMRNFWF 224 (412)
T ss_dssp HHHHHHHHHH------H-HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSS--S--------HHHHHHHTTSHHHHH
T ss_pred HHhheeeeeC------c-cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccc--cCCC--CCcHHHHHHHhcchhHHH
Confidence 8877766421 1 2234444444443333334443222111 1110000 1111 123566778999999988
Q ss_pred HHHHHHHH-hHHHhhh---hccccccccccccccchhhHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 254 IIPLFAYS-GLQQAFV---WAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 254 l~p~~~~~-g~~~~f~---~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
+...+..+ +.+..|- ...+...+.+...|.+..|+...+.=+.+++ -..+..++++
T Consensus 225 ~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~-~m~~~p~li~ 284 (412)
T PF01306_consen 225 FVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEAL-MMFFSPWLIN 284 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHH-HHHHHHHHHH
Confidence 77544333 3444432 2223333345556677777776665555555 3334444433
No 120
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.89 E-value=2e-07 Score=87.92 Aligned_cols=138 Identities=8% Similarity=-0.029 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hch-hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~-~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.++..+...+++++.+.+.||+|||+.+..+..+..+..... ..+ +...+. -.+.|++.+...+.......+..
T Consensus 246 ~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~-- 321 (393)
T PRK09705 246 LALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHS-- 321 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhc--
Confidence 456666777888899999999999999888876554433332 222 222222 24567777765554333333322
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCcc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEED 218 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~~~ 218 (314)
++++++|+.+|.......++..+||.+.+.+.+..+ ++ ...|.+..++.+++.+. ..+.||++.
T Consensus 322 -------~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 322 -------VQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG----NY-LMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred -------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----Cc-hHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 245789999999999999999999999998877643 23 33344444444444333 344555544
No 121
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.87 E-value=1.2e-07 Score=91.78 Aligned_cols=136 Identities=6% Similarity=-0.080 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhh-chhhHHHHHHHHHHHHHHhh-hch-hhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVL-GSKNALILGTTGYWLFVAAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~-G~k~~l~~g~~~~~~~~~~~-~~~-~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
...+.......++++++|+++||+ |||+++++|.+...+..... ..+ +...++.+-.+.++|.|...+...+++++.
T Consensus 49 ~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~el 128 (493)
T PRK15462 49 ELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGEL 128 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHH
Confidence 335566667778889999999999 99999999998776543322 211 112233333445566666656666778877
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (314)
.++ ++++|+.++++++...++|..+||++.+.+.++. +|++. |.+..+..+++++.+++
T Consensus 129 fp~--------~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-----Gw~~~-F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 129 YEP--------TDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-----SWAMG-FGLAAVGMIAGLVIFLC 187 (493)
T ss_pred CCC--------CCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-----ChHHH-HHHHHHHHHHHHHHHHH
Confidence 521 2247899999999999999999999999987654 47654 44433333444444433
No 122
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.87 E-value=9.2e-08 Score=90.85 Aligned_cols=135 Identities=14% Similarity=0.097 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.++..+...++.++++++.||+|+|+.+..+.+++.+..... +.++.+.++..+++.|++.+...+....++.+..
T Consensus 268 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~--- 344 (420)
T PRK09528 268 NSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNF--- 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 345556677888999999999999999998888777654443 5677888888899999988776655555555543
Q ss_pred hhhcCCCCccchhhHHHH-HHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccC
Q 021342 144 ASNHKLHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRK 215 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~-~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~ 215 (314)
+++.++...+. +.....+|.++||.+.+.+.+.. +|+.. |....++.+++.++. +.+++
T Consensus 345 -------~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-----G~~~~-f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 345 -------DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-----GFQGT-YLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred -------CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-----CchHH-HHHHHHHHHHHHHHHHHHhcC
Confidence 45677766544 66678899999999999987654 36544 444444444444333 34444
No 123
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.85 E-value=7.6e-07 Score=86.16 Aligned_cols=228 Identities=11% Similarity=0.051 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHhhHHHHHH----hhch-hhHHHHHHHHHHHHHHhhhc-hh------hhHHHHHHHHhhhhhhhhhccc
Q 021342 65 LGILYTSFTCFSLVASLVVR----VLGS-KNALILGTTGYWLFVAANLF-PS------WYTMVPASLYLGFAASIIWVGE 132 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~----~~G~-k~~l~~g~~~~~~~~~~~~~-~~------~~~l~~~r~l~G~g~~~~~~~~ 132 (314)
+.+.-+.-++..++.|.++| |+|| |+.++.|.+..++.....+. |+ +..+++.-++.+++.+...+..
T Consensus 48 ~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~ 127 (473)
T PRK10429 48 FLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPF 127 (473)
T ss_pred HHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchH
Confidence 45556677888888999999 6698 77777787777655433322 21 2233445566677777777777
Q ss_pred hhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCC--CCCchhHHHHHHHHHHHHHHHHH
Q 021342 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG--STSGTTLLFIVFLGVITLGTILM 210 (314)
Q Consensus 133 ~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~ 210 (314)
.+..+++++ +++||.+..++-....++|..+++.+...+....+.. ..+|+. ..++..++.++..+..
T Consensus 128 ~al~~~lt~---------~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~-~~~i~~~~~~~~~~~~ 197 (473)
T PRK10429 128 WSLVPTLTL---------DKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQM-FTLVLIAFFIVSTIIT 197 (473)
T ss_pred HhhhHHhCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH-HHHHHHHHHHHHHHHH
Confidence 777777762 5689999888755556666555554433332211100 012322 1222223222222222
Q ss_pred H-hccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccc-cchhhH
Q 021342 211 C-FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGVGG 288 (314)
Q Consensus 211 ~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg-~~~ig~ 288 (314)
+ ..+|.....+.+ .+.+++.+.++.++. .+++|.++.+....+..........+..+ +|....++ ....+.
T Consensus 198 ~~~~~e~~~~~~~~---~~~~~~~~~~~~~~~---~~~n~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~ 270 (473)
T PRK10429 198 LRNVHEVYSSDNQV---SAEGSHLTLKDIVAL---IYKNDQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPY 270 (473)
T ss_pred HcCceecCCccccc---cccccCCCHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHH
Confidence 2 345532111100 001122344544443 45777776665544444343343333333 33332233 344556
Q ss_pred HHHHHhhHhHHHHHHHHHHHHh
Q 021342 289 AMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 289 ~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
.+.+.++..++++. +.+++.|
T Consensus 271 ~~~~~~i~~ii~~~-~~~~l~~ 291 (473)
T PRK10429 271 YLSYAGAANLVTLI-LFPRLVK 291 (473)
T ss_pred HHHHHHHHHHHHHH-HHHHHHH
Confidence 66666666666543 5566654
No 124
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.83 E-value=9e-09 Score=96.27 Aligned_cols=147 Identities=14% Similarity=0.102 Sum_probs=107.5
Q ss_pred ccccchhhhhHHHH-HHHHHHHhhH-hhhhhh------cCC-------CChhHHHHHHHHHHHHHHHhhHHHHHHhhchh
Q 021342 25 NYTRDVHILSCAFL-LIFLAYGAAQ-NLETTV------NTE-------GNLGTISLGILYTSFTCFSLVASLVVRVLGSK 89 (314)
Q Consensus 25 ~~~~~~~~l~~~~~-~~~~~~~~~~-~l~~~i------~~~-------~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k 89 (314)
..||++..+.++-+ ++..+|+... ++..++ +.+ .+.-....++.+++..+||++.|++.|++|||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 46666666665544 3345665432 444333 111 11223345777888899999999999999999
Q ss_pred hHHHHHHHHHHHHHHhh-hc-----h--hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHH
Q 021342 90 NALILGTTGYWLFVAAN-LF-----P--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGE 161 (314)
Q Consensus 90 ~~l~~g~~~~~~~~~~~-~~-----~--~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~ 161 (314)
+++...++...+.++.. +. + -..++...|++.|+|.|.-+|..+++.++.+ .++.||...+.
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~a----------n~~~RGa~iaa 184 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESA----------NKKTRGAFIAA 184 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhh----------hhccccceeEE
Confidence 99999998887776532 32 1 2467889999999999999999998888887 45899999999
Q ss_pred HHHHHhhhhHHHHHHHHHHH
Q 021342 162 FWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 162 ~~~~~~~g~~~G~li~~~i~ 181 (314)
..+.+..|...|.+++..+.
T Consensus 185 vFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 185 VFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred EEEecchhHhhccHHHHHHH
Confidence 99999999888888776654
No 125
>TIGR00898 2A0119 cation transport protein.
Probab=98.82 E-value=1.3e-07 Score=91.96 Aligned_cols=133 Identities=14% Similarity=0.049 Sum_probs=91.4
Q ss_pred HHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhh--hHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhh
Q 021342 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSW--YTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (314)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~--~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~ 145 (314)
.+....+.++.+.+.||+|||+.+.++.+..++..+.. +.++. ...+...++.+++.+..++....+..|..
T Consensus 365 ~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~----- 439 (505)
T TIGR00898 365 GLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY----- 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----
Confidence 34455677788999999999999999887765544432 33322 33444556667777766666666666664
Q ss_pred hcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc
Q 021342 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (314)
Q Consensus 146 ~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 219 (314)
|++.|+.++|+......+|.++||.+.+ +... ++ ...++++.++.+++.++.+++||++.+
T Consensus 440 -----p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~------~~-~~~~~~~~~~~~~~~~~~~~lpet~~~ 500 (505)
T TIGR00898 440 -----PTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK------WL-FLPLVLFGGLALLAGILTLFLPETKGV 500 (505)
T ss_pred -----cHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH------HH-hhHHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 6788999999999999999999999887 4321 12 223455556666666667788887543
No 126
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.82 E-value=1.2e-06 Score=83.08 Aligned_cols=225 Identities=18% Similarity=0.055 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhc-hhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLG-SKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G-~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.++..+.-.+++++++.++||.+ +|+.+.+..+.-++.... ...++++.+++.-++..+...+. ......++-+
T Consensus 43 ~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~----~pl~dsi~~~ 118 (400)
T PF03825_consen 43 LAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPT----MPLSDSIALS 118 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccH----HHHHHHHHHH
Confidence 45555666677788899999987 577776655544332222 24456666665555555554433 2223333322
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHH-HHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI-TLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGE 221 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 221 (314)
+.++++..-.+.|- -.++|.+++.+. +..+....+ .+.....+.+..+.+++.....+.+|+++++++
T Consensus 119 ~~~~~~~~YG~iRl--------wGSiGf~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~ 187 (400)
T PF03825_consen 119 YLGDRGKDYGRIRL--------WGSIGFIVAALAFGGLLGGYLG---ISGTSLIFYIAAILSLLLAGFALFLPKTPPKRS 187 (400)
T ss_pred HcccccCCCCcchh--------hhhHHHHHHHHHHHHHHHhhhc---cccccHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 22222222223332 234555555433 222222211 011112233333333333344456776543222
Q ss_pred cccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccc-cccchhhHHHHHHhhHhHHH
Q 021342 222 KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPA-LGVSGVGGAMAVYGAFDAIF 300 (314)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~-lg~~~ig~~~~~~G~~~~i~ 300 (314)
.+++ .++ +..++..+++|+|+++......+..+...+.+++.++.+..+.. ...+.+|..+++.-++++.
T Consensus 188 ~~~~----~~~----~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~- 258 (400)
T PF03825_consen 188 AKES----VKK----LLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIP- 258 (400)
T ss_pred cCCC----ccc----ccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHH-
Confidence 1110 011 11233457899999988888888888888888888876654433 3356667777665556655
Q ss_pred HHHHHHHHHhhcC
Q 021342 301 LVELLLRWLYFSG 313 (314)
Q Consensus 301 ~~~~l~~~~~~~~ 313 (314)
-....+|++|--|
T Consensus 259 ~f~~~~~~~~r~g 271 (400)
T PF03825_consen 259 FFFFSGRFLKRFG 271 (400)
T ss_pred HHHHHHHHHHhcC
Confidence 5557777776544
No 127
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.80 E-value=3.4e-07 Score=87.43 Aligned_cols=106 Identities=21% Similarity=0.149 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhch-hhHHHHHHHHH----HHH-HHhhhch-hhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGS-KNALILGTTGY----WLF-VAANLFP-SWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~-k~~l~~g~~~~----~~~-~~~~~~~-~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
.+..-++-+++++..+.-.+|.|. |+-++.|.+.. .+| .+.+..+ +.+.++.+|++.|+|.|... ..-+|++
T Consensus 77 iaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a 155 (488)
T KOG2325|consen 77 IAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIA 155 (488)
T ss_pred HHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHH
Confidence 455666777777777777888884 55455555443 334 2223334 67888899999999987642 2445666
Q ss_pred HhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
+.+ ..++|.++++.....+.+|.++||.+.....
T Consensus 156 ~~s----------~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 156 DAS----------TVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred hcc----------CccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 654 4578999999888888899999998876554
No 128
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=1.1e-07 Score=84.12 Aligned_cols=175 Identities=14% Similarity=0.118 Sum_probs=108.8
Q ss_pred chhhhhHHHHHHHHHHHhhHhhh-----hhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHH
Q 021342 29 DVHILSCAFLLIFLAYGAAQNLE-----TTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (314)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~l~-----~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~ 103 (314)
.++++.+.+++++.+......+. +..+-+........+..|...++.+.+.+.++||+|++...+.+.....+..
T Consensus 265 pfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~ 344 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLG 344 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHH
Confidence 34455555666666655544333 3333333333334788999999999999999999999998888776544322
Q ss_pred HhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 104 AANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 104 ~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
=+.+.-+...=+.+..+.|+..+.+-.+--..++... ||++.|++.|......++|..+-|++.+.+..+
T Consensus 345 H~~l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~v----------pE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 345 HSGLFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLV----------PEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred hhhHHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhC----------CHHHhcchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 2222222222234556778777653222222233332 678999999999999999999999999998766
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 021342 184 DKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (314)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 215 (314)
. ++..|-..+|++...+++..+.+.+.+.+
T Consensus 415 ~--g~y~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 415 D--GSYDNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred C--CchhhHHHHHHHHHHHHHHHHHHHhheec
Confidence 4 33456555555544455555544454443
No 129
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.78 E-value=6.4e-07 Score=84.03 Aligned_cols=108 Identities=6% Similarity=-0.011 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
++......+..++.+.+.||+|+|+.+..+.+...+..+. ...++.+.+++..++.|++.+..++....++.+.
T Consensus 247 ~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~----- 321 (382)
T PRK11128 247 SLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR----- 321 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
Confidence 3444555666678899999999999999988877664443 3567778888899999999988766655554443
Q ss_pred hhcCCCCccchhhHHHHHH-HHHhhhhHHHHHHHHHHHcCC
Q 021342 145 SNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~-~~~~~g~~~G~li~~~i~~~~ 184 (314)
+++++++..+.+. .....|..+||++++.+.+..
T Consensus 322 ------~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 322 ------PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred ------CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456788888876 445678899999999987654
No 130
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.77 E-value=2.7e-07 Score=89.07 Aligned_cols=140 Identities=14% Similarity=-0.017 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHH--Hhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV--AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~--~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
...++..++..++++++|+++||+|||+.++.+........ ... ..++...+++.+++.|++........+....+.
T Consensus 298 ~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 377 (467)
T PRK09556 298 NTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGF 377 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhh
Confidence 34556667788999999999999999988766543332211 111 223455565677777765432222222333444
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhh-hhHHHHHHHHHHHcCCC-------CCCCCchhHHHHHHHHHHHHHHHHHH
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGNLITLAVLKDDK-------GGSTSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~G~li~~~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
. |+++||.+.|+.....++ |..++|.+.+.+.+... ....+|+.. |.+..++.+++.+..+
T Consensus 378 ~----------p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~-f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 378 V----------PKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGT-FAALDIAAIGCICLMA 446 (467)
T ss_pred c----------chhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHH-HHHHHHHHHHHHHHHH
Confidence 3 678999999999888886 77899998888876100 002357544 4445555666655555
Q ss_pred hc
Q 021342 212 FL 213 (314)
Q Consensus 212 ~l 213 (314)
++
T Consensus 447 ~~ 448 (467)
T PRK09556 447 IV 448 (467)
T ss_pred HH
Confidence 44
No 131
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.77 E-value=9.4e-08 Score=91.14 Aligned_cols=228 Identities=11% Similarity=-0.001 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHhhHHHHHH----hhch-hhHHHHHHHHHHHHHHhhh-c-h-------hhhHHHHHHHHhhhhhhhhhc
Q 021342 65 LGILYTSFTCFSLVASLVVR----VLGS-KNALILGTTGYWLFVAANL-F-P-------SWYTMVPASLYLGFAASIIWV 130 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~----~~G~-k~~l~~g~~~~~~~~~~~~-~-~-------~~~~l~~~r~l~G~g~~~~~~ 130 (314)
..+.-+..++..++.|.++| |+|| |+.+++|.+..++.....+ . | ....+++.-++..++......
T Consensus 43 ~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i 122 (428)
T PF13347_consen 43 LLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQI 122 (428)
T ss_pred HHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccC
Confidence 33444566777778888999 8996 4555567777666444433 2 3 112235566667888887777
Q ss_pred cchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCC--CchhHHHHHHHHHHHHHHH
Q 021342 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGST--SGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 208 (314)
...+...+..+ +++||.+..+.-......|..+.+.+...+....++.+. +|++..+ +.+++.++..+
T Consensus 123 ~~~al~~~lt~---------~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~-v~~iv~~v~~~ 192 (428)
T PF13347_consen 123 PYNALIPELTP---------DPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL-VLAIVGLVFFL 192 (428)
T ss_pred chhhcCccccc---------cHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH-HHHHHHHHHhh
Confidence 76777777752 457899888877666777776555555554443322211 4554333 33333333333
Q ss_pred H-HHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccccc-hh
Q 021342 209 L-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS-GV 286 (314)
Q Consensus 209 l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~-~i 286 (314)
+ .+..+|++++.++ ..++.+.++.+++ .+++|.++.+.-..+...+......+.++ +|....+|.. ..
T Consensus 193 i~~~~~ke~~~~~~~------~~~~~~~~~~~~~---~~~nr~~~~l~~~~~~~~~~~~~~~~~~~-y~~~~vl~~~~~~ 262 (428)
T PF13347_consen 193 ITFFFVKERSVEVTE------QEKKISLRDSLRS---LFRNRPFRILLLAFFLQWLAFALMNTFLP-YYFTYVLGNEGLI 262 (428)
T ss_pred hhhheeeeccccccc------cccccccccchhh---hcccchHHHHHHHHHHHHhhhhhhhhHHH-HHHHHHhcCchhh
Confidence 3 3446662111111 1123344444443 56777777666555555444444443333 3333334433 44
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHhhcC
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLYFSG 313 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~~~~ 313 (314)
+..+.+..+...++. .+..++.|--|
T Consensus 263 ~~~~~~~~~~~~v~~-~~~~~l~~r~g 288 (428)
T PF13347_consen 263 SIFMLIFFVASIVGS-PLWGRLSKRFG 288 (428)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHcc
Confidence 455555555555533 35566666443
No 132
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.76 E-value=1.5e-06 Score=83.58 Aligned_cols=218 Identities=17% Similarity=0.139 Sum_probs=135.7
Q ss_pred HHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhh--hhhccchhhHhHhhhhhhhhcCCC
Q 021342 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAAS--IIWVGEGTYLTAAALSHASNHKLH 150 (314)
Q Consensus 73 ~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~--~~~~~~~~~i~~~~~~~~~~~~~~ 150 (314)
.+...+.|.++|++|||..+....++..+-........++.++ +.|+..+ ..+....+|++|++
T Consensus 76 ~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~~s~~~a~vadis---------- 141 (463)
T KOG2816|consen 76 LISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAIFSVGFAYVADIS---------- 141 (463)
T ss_pred HHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhhhhhhhhheeecc----------
Confidence 3445567889999999999999988766555554444444433 4444443 34455667777775
Q ss_pred CccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCccccccc-ccc--
Q 021342 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKE-TAD-- 226 (314)
Q Consensus 151 ~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~~~~~-~~~-- 226 (314)
.+++|....|+....+..+..+||.+++.+.+..+ ....+.+..+..+++.+.. +++||+..+++++ .+.
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~------~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~ 215 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG------IALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE 215 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC------chHHHHHHHHHHHHHHHHHhhccccccCccccccccccc
Confidence 56799999999999999999999999998877643 1333555556656655544 6788876654433 111
Q ss_pred cccc--ccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhc-ccccccc--ccccccchhhHHHHHHhhHhHHHH
Q 021342 227 ASVN--FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA-EFTKEIV--TPALGVSGVGGAMAVYGAFDAIFL 301 (314)
Q Consensus 227 ~~~~--~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~-~~~~~~~--~~~lg~~~ig~~~~~~G~~~~i~~ 301 (314)
.... ......+..+...+.-.++..+.+.+..++.-.....-.. ..+ .|. ...++.++.+...+..+....+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~-~yl~~~f~w~~~~~s~~~~~~~~~~~i~~ 294 (463)
T KOG2816|consen 216 LTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLL-LYLKAKFGWNKKEFSDLLSLVSILGIISQ 294 (463)
T ss_pred cCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEE-EEEeeecCcCHHHHHHHHHHHHHHHHHHH
Confidence 0000 0111122233333333455666666655555444333223 221 221 246889999999999999999989
Q ss_pred HHHHHHHHhh
Q 021342 302 VELLLRWLYF 311 (314)
Q Consensus 302 ~~~l~~~~~~ 311 (314)
++++..+.+-
T Consensus 295 l~~~~~l~~~ 304 (463)
T KOG2816|consen 295 LLLLPLLSSI 304 (463)
T ss_pred HHHHHHHHHH
Confidence 8877666553
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=98.76 E-value=1e-06 Score=82.73 Aligned_cols=131 Identities=14% Similarity=-0.046 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHH-hhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~-~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.++......+++++.+.+.||+|+|.......+.-..... ....++...+++..++.|++.+..-+.....+.+.
T Consensus 247 ~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~---- 322 (390)
T PRK03545 247 LLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKL---- 322 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHh----
Confidence 4455566677888899999999988754433322222212 22345666777788888888765433333333332
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (314)
.+++|++++|++....++|..+||++++.+.++. +++.. |.+...+.+++.+....
T Consensus 323 -------~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-----g~~~~-~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 323 -------APDATDVAMALFSGIFNIGIGAGALLGNQVSLHL-----GLSSI-GYVGAALALAALVWSIL 378 (390)
T ss_pred -------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ChhHH-HHHHHHHHHHHHHHHHH
Confidence 2468899999999999999999999999988765 35433 44555555565555443
No 134
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.75 E-value=2.5e-07 Score=88.05 Aligned_cols=139 Identities=16% Similarity=0.090 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhh------ch------hhhHHHHHHHHhhhhhhh-h
Q 021342 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL------FP------SWYTMVPASLYLGFAASI-I 128 (314)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~------~~------~~~~l~~~r~l~G~g~~~-~ 128 (314)
.....+..+...++.+++++++||+|||+.+.++.+...+...... .+ +...+....+ .+.+.+. .
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 400 (481)
T TIGR00879 322 FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILL-FIAFFAMGW 400 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHH-HHHHHHccc
Confidence 3344566677778889999999999999999888765544322211 11 2222322323 2333332 2
Q ss_pred hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 021342 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
.+....++.+.. |+++|++.+++.....++|.+++|.+.+.+..+. +|++. |++..++++++.+
T Consensus 401 ~~~~~~~~~~~~----------p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-----~~~~~-f~~~~~~~~~~~i 464 (481)
T TIGR00879 401 GPVPWVIVSEIF----------PLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-----GVGGV-FIFFGGLNVLGLI 464 (481)
T ss_pred cCeehhhhhccC----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----Cccce-ehhHHHHHHHHHH
Confidence 233444556654 6789999999999999999999999988776653 35433 4445555555554
Q ss_pred HH-HhccCCc
Q 021342 209 LM-CFLRKEE 217 (314)
Q Consensus 209 l~-~~l~~~~ 217 (314)
+. ++.||++
T Consensus 465 ~~~~~~~~~~ 474 (481)
T TIGR00879 465 FVYFFLPETK 474 (481)
T ss_pred HHheecccCC
Confidence 44 4456554
No 135
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.74 E-value=6.5e-07 Score=83.92 Aligned_cols=108 Identities=15% Similarity=0.102 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
.++......+++++.+.+.||+|+|+++..+.....+..+... +. ...+.+.++.|++.....+.....+.+..
T Consensus 241 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~---- 314 (381)
T PRK03633 241 MALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQ-AAMAPALFILGAAGFTLYPVAMAWACEKV---- 314 (381)
T ss_pred HHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hh-HHHHHHHHHHHHHHHhHHHHHHHHHHccC----
Confidence 4556667778888999999999999999888777665433322 22 23334667788876665555444444432
Q ss_pred hhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
++++++...+.+...+++|..+||.+++.+.++.
T Consensus 315 ------~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~ 348 (381)
T PRK03633 315 ------EHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY 348 (381)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567777788888889999999999999887754
No 136
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.74 E-value=2.1e-07 Score=86.63 Aligned_cols=177 Identities=12% Similarity=0.124 Sum_probs=126.4
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhhhhhcC-CCChhHHHH----HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~-~~~~g~~~~----~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~ 99 (314)
++++|+.+.-++-+++-...++...+...... +.+++...+ -....+-.+++++.|.+.||+|.|+++..+.+.+
T Consensus 249 ~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~ 328 (438)
T COG2270 249 RGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVIL 328 (438)
T ss_pred hcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHH
Confidence 56678888888888887777776655544433 334444332 2344566788899999999999999999999888
Q ss_pred HHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHH
Q 021342 100 WLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (314)
Q Consensus 100 ~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~ 178 (314)
.+..+. .+......+.+...+.|...|+.+...-.|.++.. |+++-++++|+|......++..||.+-+
T Consensus 329 ~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lv----------p~~k~~~fFglyaltgra~S~~gp~lv~ 398 (438)
T COG2270 329 SIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLV----------PKGKEGRFFGLYALTGRAASFLGPFLVA 398 (438)
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhC----------CCccccceeehhhhhhhHHHHHHHHHHH
Confidence 654443 34444555556779999999999988888888886 6678899999999999999999999987
Q ss_pred HHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 179 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
.+.+-.+ +-|.- +...+.+-.++.++...+|++
T Consensus 399 v~t~iTg----~~r~g-~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 399 VITQITG----SSRAG-VLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHhc----chhhH-HHHHHHHHHhhHhhEEeecCC
Confidence 7776543 22322 333334444555655666665
No 137
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.71 E-value=5.9e-06 Score=77.55 Aligned_cols=229 Identities=15% Similarity=0.041 Sum_probs=119.8
Q ss_pred HHHHH-HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-h--hch----hhh--HHHHHHHHhhhhhhhhhccchh
Q 021342 65 LGILY-TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-N--LFP----SWY--TMVPASLYLGFAASIIWVGEGT 134 (314)
Q Consensus 65 ~~~~~-~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~--~~~----~~~--~l~~~r~l~G~g~~~~~~~~~~ 134 (314)
++++| .++....+.+-++.||+|-|.+..++...-.+-... . ..+ .+. ....+..+.+.+.-.....-.-
T Consensus 84 lsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPsk 163 (480)
T KOG2563|consen 84 LSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSK 163 (480)
T ss_pred HHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccH
Confidence 34444 566667777889999999999999999876553332 1 122 233 4445555555555443322222
Q ss_pred hHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC-CCCCCchh-HHHHHHHHHHHHHHHHHHh
Q 021342 135 YLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-GGSTSGTT-LLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 135 ~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 212 (314)
..+.++ +++||..+..+=.....+|.++|.++.-.+..+.. ..+.+|.. .++....+.+.+.+.+..+
T Consensus 164 iA~~WF----------~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~ 233 (480)
T KOG2563|consen 164 IAAVWF----------PPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLF 233 (480)
T ss_pred HHHhhC----------CcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333 67999999988888888999999998877776552 11222321 1122222222222222222
Q ss_pred c-cCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHH-HHHhHHHhhhhccc----cccccccccccchh
Q 021342 213 L-RKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEF----TKEIVTPALGVSGV 286 (314)
Q Consensus 213 l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~-~~~g~~~~f~~~~~----~~~~~~~~lg~~~i 286 (314)
. +++++.+........ .+.++. +++.++++++.+.+++..+ +-.|...+.+...- ++.|.. .-..++
T Consensus 234 ~~~~~P~tPps~s~~~~--~~~~f~---~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~--~~aG~i 306 (480)
T KOG2563|consen 234 VFTKKPPTPPSASQAAL--QDASFP---KSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEG--VFAGYI 306 (480)
T ss_pred hcCCCCCCCCchhHhhh--hcCcHH---HHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCc--cccchh
Confidence 2 221111100000000 012233 4556789999887766433 22333333222111 222211 234566
Q ss_pred hHHHHHHhhHhHHHHHHHHHHHHh
Q 021342 287 GGAMAVYGAFDAIFLVELLLRWLY 310 (314)
Q Consensus 287 g~~~~~~G~~~~i~~~~~l~~~~~ 310 (314)
|..+++.|...++.+...+=|+-|
T Consensus 307 g~l~iv~Gmlga~~~gii~Dktk~ 330 (480)
T KOG2563|consen 307 GALMIVAGMLGALASGIIADKTKK 330 (480)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhh
Confidence 778888888777766555544443
No 138
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.70 E-value=1.1e-06 Score=81.13 Aligned_cols=129 Identities=13% Similarity=0.053 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhH--H------HHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNA--L------ILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTY 135 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~--l------~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~ 135 (314)
.++..+...++.++.++++||+|||+. . ..+.+...+.... ...++....+....+.+++.+ ..+...++
T Consensus 257 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 335 (399)
T TIGR00893 257 ASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWAL 335 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHH
Confidence 455566677888899999999999961 1 1111111111111 112233344333334444443 55666666
Q ss_pred HhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 021342 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (314)
Q Consensus 136 i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (314)
+.+.. |+++|++.+|++.....+|..+||.+.+.+.+..+ +|+. .|++..++.+++.+.
T Consensus 336 ~~~~~----------~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g----~~~~-~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 336 ISDNA----------PGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG----SFAG-ALMVVAALALIGALS 394 (399)
T ss_pred HHhhc----------ChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC----chhH-HHHHHHHHHHHHHHH
Confidence 66664 67899999999999999999999999988866532 1433 344444444444443
No 139
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.69 E-value=1.7e-06 Score=81.78 Aligned_cols=132 Identities=15% Similarity=0.168 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHH-HHHHHHHHHHHh-h-----hchhhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALI-LGTTGYWLFVAA-N-----LFPSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~-~g~~~~~~~~~~-~-----~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
.++..++..+++++.+.++||+|||+.+. .+.+...+.... . ..++.+.++++.++.|++.+...+. ...+.
T Consensus 263 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~ 341 (402)
T TIGR00897 263 WGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFP 341 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 34556777888899999999999988764 333322221111 1 1234556667788888887764332 22333
Q ss_pred HhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 021342 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (314)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 214 (314)
+. ++++||+.+|++.....+|..+||.+++.+.+.. ++.. .+++..++.+++.++.+|++
T Consensus 342 ~~-----------~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-----g~~~-~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 342 TL-----------APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF-----GAIG-VVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred hh-----------CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----chHH-HHHHHHHHHHHHHHHHHHhc
Confidence 32 3468999999999999999999999998887654 3433 34455566666666666654
No 140
>PRK10504 putative transporter; Provisional
Probab=98.68 E-value=9.4e-07 Score=85.10 Aligned_cols=103 Identities=17% Similarity=0.091 Sum_probs=74.3
Q ss_pred HHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc---hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhh
Q 021342 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~ 146 (314)
...++.++++++.||+|+|+++..+.++..+..... +. ++...+...-++.|++.+...+....++.+..
T Consensus 309 ~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------ 382 (471)
T PRK10504 309 GSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDL------ 382 (471)
T ss_pred HHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------
Confidence 334455678999999999999998887665543332 21 22333344567778888877766666665543
Q ss_pred cCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 147 ~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
+++++|..++++....++|..+|+.+++.+...
T Consensus 383 ----~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 383 ----PDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred ----CHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999998877653
No 141
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.66 E-value=7.4e-06 Score=75.18 Aligned_cols=211 Identities=12% Similarity=0.019 Sum_probs=113.4
Q ss_pred HHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhcc-chhhHhHhhhhhhhhcCC
Q 021342 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVG-EGTYLTAAALSHASNHKL 149 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~-~~~~i~~~~~~~~~~~~~ 149 (314)
..++...+.|.++||+|||+.-++-.+.|.+..+.-..+++..++++|++.|++.+.++.+ +.=++.++-+ ++.
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~-----~g~ 155 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNK-----RGF 155 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCC
Confidence 3344455678899999999999888888876555556689999999999999999998877 5556666521 232
Q ss_pred CCccchhhHHHHHH-HHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh-ccCCccccccccccc
Q 021342 150 HEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADA 227 (314)
Q Consensus 150 ~~~~~rg~~~~~~~-~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~~~~~~~ 227 (314)
|++..+.-++.-. ....+-.+..++++-.+.+..+. + +...|...+.+.+++.++... =+|.+.+.++
T Consensus 156 -~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~---g-~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~----- 225 (354)
T PF05631_consen 156 -PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF---G-PVAPFDAAIVLLAVAAVLILKTWPENYGDTSS----- 225 (354)
T ss_pred -ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC---C-CcchHHHHHHHHHHHHHHHHhcccccCCCccc-----
Confidence 2223333222211 11122234444554444433221 1 222355555555554444332 2343322111
Q ss_pred cccccchHHHHHHHHHH-hhcChhHHHHHHH-HHHHhHHHhhhhccccccccccccccchhhHHHHHHhhHhHHHHH
Q 021342 228 SVNFYSYLVSLSKSITT-LLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 228 ~~~~~~~~~~~~~~~~~-~l~~~~~lll~p~-~~~~g~~~~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~ 302 (314)
+.+..+.+++..+ ..+||+++++-.+ .++=+-.+.|+.=|-|.-- ... ..--.|+++..+=++.++++.
T Consensus 226 ----~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~~~-~~~P~GlIFssFM~a~MlGS~ 296 (354)
T PF05631_consen 226 ----SSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-PDD-EELPLGLIFSSFMVAMMLGSS 296 (354)
T ss_pred ----ccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-CCC-CCCCchHHHHHHHHHHHHHHH
Confidence 1122233333333 4568888876643 3344444555555545222 100 011245666666666666664
No 142
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.66 E-value=2.9e-07 Score=85.37 Aligned_cols=110 Identities=15% Similarity=-0.030 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHH--Hhh-h--chhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV--AAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~--~~~-~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
.++..+...++.++.++++||+|||+.+..+..+..+.. ... . .++.+.++...++.|++.+..++....++.+.
T Consensus 261 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 340 (394)
T TIGR00883 261 LMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPEL 340 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 455566777888889999999999998775544332211 111 1 23555666677888888888877777777776
Q ss_pred hhhhhhhcCCCCccchhhHHHHH-HHHHhhhhHHHHHHHHHHHcCC
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEF-WGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~-~~~~~~g~~~G~li~~~i~~~~ 184 (314)
. |+++|+++.++. ......|..+||.+++.+.++.
T Consensus 341 ~----------p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 341 F----------PTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred C----------CccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 5 668899998874 4556688889999999887764
No 143
>PRK09952 shikimate transporter; Provisional
Probab=98.64 E-value=2.8e-06 Score=81.36 Aligned_cols=133 Identities=10% Similarity=-0.008 Sum_probs=84.0
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h---c-hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L---F-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~---~-~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
....++.++.++++||+|||+++..+.+.-.+..... . . ++...++...++.|++.+..++...++++|..
T Consensus 297 ~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~---- 372 (438)
T PRK09952 297 GLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMF---- 372 (438)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
Confidence 4445667788999999999999887765433322211 1 1 22334344556667887777777777888875
Q ss_pred hhcCCCCccchhhHHHHHHHH-HhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 145 SNHKLHEGTVIGSFNGEFWGM-FASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~-~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
|.+.|+...++-+.. ..+|..++|.+.+.+.+..+ .+|... +....++.+++.+..+.++|+
T Consensus 373 ------p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~---~~~~~~-~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 373 ------GASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG---GSWHSV-AIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred ------CcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHH-HHHHHHHHHHHHHHHHHcccc
Confidence 567888888875444 45788899999888765331 135433 333445555665555666653
No 144
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.63 E-value=1.6e-06 Score=82.65 Aligned_cols=154 Identities=17% Similarity=0.076 Sum_probs=107.7
Q ss_pred ccchhhhhHHHHHHHHHHHhhHhh-----hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHH
Q 021342 27 TRDVHILSCAFLLIFLAYGAAQNL-----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (314)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~l-----~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~ 101 (314)
.|++..+.+..++...+....... +..++.+ +.......+..+...++.+++++++||+|+|+++..+.+.+.+
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHH
Confidence 345555555555444443332211 1222222 3333334566677777888899999999999999999998877
Q ss_pred HHHhh-hc--hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHH
Q 021342 102 FVAAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (314)
Q Consensus 102 ~~~~~-~~--~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~ 178 (314)
..+.. +. ++.+.+++.-++.|++.+..++...++++|..|.... ++.+++.|..+|.+.....++..+++.+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~---~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 303 GFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEW---KTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHH---hcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 66553 44 4888888899999999999999999999998763211 122355688999999999999999999888
Q ss_pred HHHcCC
Q 021342 179 AVLKDD 184 (314)
Q Consensus 179 ~i~~~~ 184 (314)
.+....
T Consensus 380 ~~l~~~ 385 (428)
T PF13347_consen 380 LLLALV 385 (428)
T ss_pred HHHHHh
Confidence 776543
No 145
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.63 E-value=2.7e-06 Score=80.63 Aligned_cols=129 Identities=16% Similarity=0.255 Sum_probs=90.2
Q ss_pred hhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhc-hhhhHH----HHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCC
Q 021342 77 LVASLVVRVLGSKNALILGTTGYWLFVAA-NLF-PSWYTM----VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (314)
Q Consensus 77 ~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~-~~~~~l----~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~ 150 (314)
++.+.+.+|+|.|+++.++.+.+++=... ... ++.+.. +..-.++|+..+..+.+.-.|+.+..
T Consensus 261 ~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~---------- 330 (400)
T PF03825_consen 261 FFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIA---------- 330 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC----------
Confidence 45799999999999999999999874333 232 443333 23345699999999999888888876
Q ss_pred CccchhhHHHHHHHH-HhhhhHHHHHHHHHHHcCCCC-CCCCchhHHHHHHHHHHHHHHHHH-HhccCC
Q 021342 151 EGTVIGSFNGEFWGM-FASHQFVGNLITLAVLKDDKG-GSTSGTTLLFIVFLGVITLGTILM-CFLRKE 216 (314)
Q Consensus 151 ~~~~rg~~~~~~~~~-~~~g~~~G~li~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~ 216 (314)
|++.|+++.+++.+. ..+|..+|++++|.+.+..+. +...| ..+|.+..++.++..+++ ++.||+
T Consensus 331 p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~-~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 331 PPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDW-SAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred CccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhH-HHHHHHHHHHHHHHHHHHHhhccCC
Confidence 789999999999876 579999999999999886541 11112 233444444444444333 344554
No 146
>TIGR00895 2A0115 benzoate transport.
Probab=98.63 E-value=4.9e-07 Score=84.10 Aligned_cols=108 Identities=12% Similarity=-0.009 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
...++..++..++.++++.++||+|+|+.+....+.-....... ..++....++..++.|++.+...+...+++.+..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~- 367 (398)
T TIGR00895 289 TGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFY- 367 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-
Confidence 33556667778888999999999999955444333222222222 2445556667788999999988777777777765
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHH
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i 180 (314)
|+++|++.+|++.....+|..+||.+++.+
T Consensus 368 ---------~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 368 ---------PTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 678999999999999999999999998764
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.61 E-value=4e-07 Score=87.71 Aligned_cols=110 Identities=10% Similarity=-0.010 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHh--hchhhHHHHHH--HHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRV--LGSKNALILGT--TGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~--~G~k~~l~~g~--~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
.++..++..+++++++.+.|| +++|+...++. +...+..+. ...++.+.+++.+++.|++.+..++...+++.+.
T Consensus 282 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~ 361 (455)
T TIGR00892 282 LSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDL 361 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 445555556666778889987 44444443332 222222222 2456777788889999999988887777777776
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
. +++++++.+|++....++|.++||.+++.+....
T Consensus 362 ~----------~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~ 396 (455)
T TIGR00892 362 V----------GAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT 396 (455)
T ss_pred h----------hHHHHhhHHhHHHHHHHHHHHccccceeeeehhc
Confidence 5 5689999999999999999999999998876543
No 148
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.60 E-value=1.8e-06 Score=78.99 Aligned_cols=174 Identities=13% Similarity=0.065 Sum_probs=105.1
Q ss_pred hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCC-
Q 021342 109 PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG- 187 (314)
Q Consensus 109 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~- 187 (314)
.++..++++-++.|.|.+..-++...|++++. +++++++++++..+++.+|..+||++++.+.......
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~----------~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~ 77 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILG----------PIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDL 77 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHC----------CcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcch
Confidence 56778888999999999999999999999986 5678999999999999999999999988776432100
Q ss_pred ----------CCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHH-HH
Q 021342 188 ----------STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI-IP 256 (314)
Q Consensus 188 ----------~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll-~p 256 (314)
..+|++.++++.....++.+ ++.+.+.|+.+++++ ++...++.. +.+ +.+++|..++. .-
T Consensus 78 ~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i-~~~~~~~p~~~~~~~-~~~~~~~~~----~~~---~~~~~~~~~l~~~~ 148 (310)
T TIGR01272 78 SMQVATANAEAAKVHTPYLLLAGALAVLAI-IFAFLPLPELQEADV-ARVSSGDTT----QKT---SAFQFTHLVLGALG 148 (310)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHH-HHHHccCCCCCcccc-ccccccccc----chh---hHHhhHHHHHHHHH
Confidence 02455543333333333333 333443332211111 110000000 011 23445555543 45
Q ss_pred HHHHHhHHHhhhhcccccccccc---ccccchhhHHHHHHhhHhHHHHH
Q 021342 257 LFAYSGLQQAFVWAEFTKEIVTP---ALGVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 257 ~~~~~g~~~~f~~~~~~~~~~~~---~lg~~~ig~~~~~~G~~~~i~~~ 302 (314)
.++|.|.+.+. .++++.+.... .++.++.++....+-...+++..
T Consensus 149 ~f~yvg~e~~~-~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~ 196 (310)
T TIGR01272 149 IFVYVGAEVSA-GSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRF 196 (310)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 66777777766 55666655432 45566777766666666665443
No 149
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.60 E-value=2.5e-06 Score=82.17 Aligned_cols=147 Identities=12% Similarity=0.075 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh--h-chhh--hHHHHHHHHhhhhhhhhh-ccchh
Q 021342 61 GTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--L-FPSW--YTMVPASLYLGFAASIIW-VGEGT 134 (314)
Q Consensus 61 g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~--~-~~~~--~~l~~~r~l~G~g~~~~~-~~~~~ 134 (314)
.........+...++++++++++||+|||+.++.+.++.++..+.. . .++. ...+.+-++.+++.+..+ +....
T Consensus 308 ~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (479)
T PRK10077 308 ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWV 387 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHH
Confidence 3333445556677888899999999999999999888765543332 1 1111 112223334444444333 33445
Q ss_pred hHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC-CCCCCchhHHHHHHHHHHHHHHHHH-Hh
Q 021342 135 YLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-GGSTSGTTLLFIVFLGVITLGTILM-CF 212 (314)
Q Consensus 135 ~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 212 (314)
++++.. |+++|++++|+......+|.++|+.+...+....- ....+|+.. |..+.+..+++.++. ++
T Consensus 388 ~~~e~~----------p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 388 LLSEIF----------PNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFS-YWIYGCMGVLAALFMWKF 456 (479)
T ss_pred HhHhhC----------ChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccH-HHHHHHHHHHHHHHHHhc
Confidence 566654 66899999999999999999998766544331000 001234332 444444444444443 45
Q ss_pred ccCCcc
Q 021342 213 LRKEED 218 (314)
Q Consensus 213 l~~~~~ 218 (314)
.||++.
T Consensus 457 ~~e~~~ 462 (479)
T PRK10077 457 VPETKG 462 (479)
T ss_pred cccCCC
Confidence 666543
No 150
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.59 E-value=1.4e-06 Score=84.41 Aligned_cols=110 Identities=8% Similarity=-0.077 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhc--hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~--~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
.+...++..++++++++++||+|||+++..+.+...+..+. ... .+...+....++.|+......+....++.+..
T Consensus 317 ~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 395 (496)
T PRK03893 317 LFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYF- 395 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhC-
Confidence 45566677788889999999999999988877654443322 111 23333333444444333333344445555554
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
|+++||+.+|++.....+|..+||++++.+.+..
T Consensus 396 ---------~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 396 ---------DTEQRAAGLGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred ---------CHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence 6689999999999999999999999999887654
No 151
>PRK11462 putative transporter; Provisional
Probab=98.59 E-value=2.2e-05 Score=75.85 Aligned_cols=109 Identities=6% Similarity=0.000 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHh----hchh-hHHHHHHHHHHHHHHhh-hchh------hhHHHHHHHHhhhhhhhhhccc
Q 021342 65 LGILYTSFTCFSLVASLVVRV----LGSK-NALILGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGE 132 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~----~G~k-~~l~~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~~~~~~~~ 132 (314)
..+.-+..++..++.|.++|| +||| +-+++|.+.+++..... ..|. ...+++.-++..++....-+.-
T Consensus 51 ~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy 130 (460)
T PRK11462 51 FLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPY 130 (460)
T ss_pred HHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccH
Confidence 345556778888999999995 7875 55566766666544443 2332 2233345556677777766666
Q ss_pred hhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 133 ~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
.+..+++++ +++||.+..++......+|..+++++...+..
T Consensus 131 ~al~~~lt~---------d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~ 171 (460)
T PRK11462 131 CALGGVITN---------DPTQRISLQSWRFVLATAGGMLSTVLMMPLVN 171 (460)
T ss_pred HHHHHHhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777763 57999999999888888888888777554443
No 152
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.59 E-value=1.8e-06 Score=82.08 Aligned_cols=116 Identities=10% Similarity=-0.113 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc-hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~-~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.+..+...++.+++++++||+|+|+++.++.++..+..+.. +. .+...+++..++.|++.+...+...++++|..+..
T Consensus 264 ~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (437)
T TIGR00792 264 SIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYG 343 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 34455666777889999999999999999887665543332 22 34555666778889998887777777777765321
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
+..++++.+|..+|++..+..+|..+|+.+.+.+.+..
T Consensus 344 ---~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 344 ---EWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred ---hhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11123456799999999999999999999988887543
No 153
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.57 E-value=1.8e-06 Score=79.32 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hch-hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~-~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.+...+...++.++.+.+.||+|||+.+..+.....+..... +.+ +.+.+++..++.|++.+...+...+++.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-- 330 (365)
T TIGR00900 253 LAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRV-- 330 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence 445556666777888999999999999988766554433332 334 3667777889999999988777777777765
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
|+++|++..|++.....++..+||.+++.+.+.
T Consensus 331 --------~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 331 --------PAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999998887653
No 154
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.54 E-value=4e-06 Score=80.15 Aligned_cols=133 Identities=16% Similarity=0.049 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhh--c-hhhHHHHHHHHHHHHHHh---hhchhhhHHHHHHHHhhhhhhhhhccchhhH
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVL--G-SKNALILGTTGYWLFVAA---NLFPSWYTMVPASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~--G-~k~~l~~g~~~~~~~~~~---~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i 136 (314)
...++..++..++.++.+.++||+ + ||+......++..+.... ....+...+.+..+..|++..........+.
T Consensus 283 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 362 (434)
T PRK11663 283 SAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAA 362 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 345666777888999999999999 3 333322211111111111 1112233333333334443221111122233
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
.+. .++++||+.+|+.....++|.++||.+.+.+.+.. +|+.. |....++.+++.+...
T Consensus 363 ~~~----------~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~-----g~~~~-f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 363 AEC----------SHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW-----HWTGF-FVVISIAAGISALLLL 421 (434)
T ss_pred Hhc----------ccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc-----ccHHH-HHHHHHHHHHHHHHHH
Confidence 333 25689999999999999999999999988887654 36443 4444555554444333
No 155
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.54 E-value=5e-06 Score=78.28 Aligned_cols=128 Identities=14% Similarity=0.102 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.++..+...++.++.+.+.||+|+|+.+.++.+++.+.... ...++.+.+++.+++.|++..........+..+.
T Consensus 260 ~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~---- 335 (396)
T TIGR00882 260 TTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ---- 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 34445566677788899999999999999988877664444 3567788788889999988654322222222221
Q ss_pred hhhcCCCCccchhhHHHH-HHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 021342 144 ASNHKLHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~-~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
.+++.++...+. +.....+|.++|+++++.+.+.. +++.. |.+..++..+..+
T Consensus 336 ------~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-----G~~~~-f~~~~~~~~i~~~ 389 (396)
T TIGR00882 336 ------FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-----GFQGA-YLVLGCIVLLFTL 389 (396)
T ss_pred ------CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-----ccHHH-HHHHHHHHHHHHH
Confidence 133455554544 56788999999999999987754 35433 4444444444433
No 156
>PRK09848 glucuronide transporter; Provisional
Probab=98.53 E-value=3.4e-06 Score=80.88 Aligned_cols=110 Identities=13% Similarity=-0.067 Sum_probs=79.8
Q ss_pred HHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc--hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhc
Q 021342 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~--~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~ 147 (314)
...++.++.+.+.||+|+|+++.+|.++..+..+.. +. .+.+.+++..++.|+|.+...+...+..+|..+...
T Consensus 276 ~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~--- 352 (448)
T PRK09848 276 GTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGE--- 352 (448)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH---
Confidence 345567788899999999999999987665433332 32 245566667788999999888877777777764211
Q ss_pred CCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 148 ~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
.++..+++|...|.+.....+|..+|+.+.+.+...
T Consensus 353 ~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 353 YLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011234569999999999999999999998877643
No 157
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.52 E-value=3e-06 Score=77.76 Aligned_cols=137 Identities=11% Similarity=0.074 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
+-....+..+-+++..++.+.|++|||+...+..+.-.++... ...||+..+++.|.+.|+|.|+ .+...+.-.+.-
T Consensus 117 llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~l- 194 (528)
T KOG0253|consen 117 LLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFL- 194 (528)
T ss_pred HHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhc-
Confidence 3345677888899999999999999999998888766554444 4789999999999999999988 333333333332
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
|..+|+..+-++ +.+..|.++...++..+..+. +|||.++.+..-.. +...+.+.++|+.
T Consensus 195 ---------p~~~r~~~~V~~-~~waig~v~ea~law~vm~~~-----gwr~~l~~~~~pl~-~~a~f~~w~~ESp 254 (528)
T KOG0253|consen 195 ---------PSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF-----GWRYLLFTSSTPLM-FAARFLVWVYESP 254 (528)
T ss_pred ---------cCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHhHHH-HHHHHHhhcccCc
Confidence 556777766666 778999999999988877665 59876555543332 2333345577754
No 158
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.52 E-value=6.7e-06 Score=80.03 Aligned_cols=132 Identities=10% Similarity=0.037 Sum_probs=85.4
Q ss_pred HHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh----hh-chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NL-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~----~~-~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
..+..++.++++.++||+|+|+.+.++.++..+..+. .. .++...+...-++..++.+...++..++..+..
T Consensus 269 ~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~--- 345 (491)
T PRK11010 269 LLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLC--- 345 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 3566788899999999999988877666543332221 11 234444443444544444433333445555554
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
+++.+++..+++.....+|..+++.+++.+.+.. +|+ ..|.+..++++.++++...++++
T Consensus 346 -------~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-----G~~-~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 346 -------NKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-----GWP-TFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred -------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ChH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567788899999999999888888888877654 364 45666677777777777666654
No 159
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.50 E-value=1.7e-06 Score=84.28 Aligned_cols=136 Identities=11% Similarity=-0.001 Sum_probs=78.4
Q ss_pred HHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh--hhc---hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhh
Q 021342 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA--NLF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (314)
Q Consensus 72 ~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~--~~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~ 146 (314)
..++.++++.++||+|||+.++++..+..+.... ... ++...+...-+...++....++....+.+|..
T Consensus 348 ~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~------ 421 (502)
T TIGR00887 348 TVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF------ 421 (502)
T ss_pred HHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC------
Confidence 3346677899999999999998877655432221 111 11111111111111111112222334445554
Q ss_pred cCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCC-C-C---CCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-G-G---STSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 147 ~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~-~-~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
|.+.|++..|+......+|.+++|.+.+.+.+..+ + + ..+. ...|+++.++.+++.+..+++||++.
T Consensus 422 ----p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 422 ----PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWM-GHVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred ----chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccc-hHHHHHHHHHHHHHHHHheEeccCCC
Confidence 77899999999999999999999998777655321 0 0 0111 22355566666666555667888754
No 160
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.49 E-value=1.8e-06 Score=85.88 Aligned_cols=154 Identities=16% Similarity=0.168 Sum_probs=96.8
Q ss_pred HHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCC-----
Q 021342 113 TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG----- 187 (314)
Q Consensus 113 ~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~----- 187 (314)
.++.+-++.|+|+.+.++-.-+|+.|.. .+++-..++|+.+.+..+|+++|-+++++.++-..+.
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnv----------k~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~ 308 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNV----------KKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPI 308 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccc----------cccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCC
Confidence 6668999999999999999999999987 3468889999999999999999999999988643211
Q ss_pred ---CCCchh--HHH---HHHHHHHHHHHHHHHhccCCcccc-------cccc--cccc-cccc----chHHHHHHHHHHh
Q 021342 188 ---STSGTT--LLF---IVFLGVITLGTILMCFLRKEEDKG-------EKET--ADAS-VNFY----SYLVSLSKSITTL 245 (314)
Q Consensus 188 ---~~~~~~--~~~---~~~~~~~~~~~~l~~~l~~~~~~~-------~~~~--~~~~-~~~~----~~~~~~~~~~~~~ 245 (314)
..+.|| .+| ++...+.++..+.++++|+..++. +.+. ++.. .+++ +..++-.+.+.++
T Consensus 309 ~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~l 388 (735)
T KOG3626|consen 309 GITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRL 388 (735)
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHH
Confidence 112222 123 344444445555567777643321 1110 1110 1111 2334445666788
Q ss_pred hcChhHHHHHHHHHHHhHHHhhhhccccccc
Q 021342 246 LADVRMLLIIPLFAYSGLQQAFVWAEFTKEI 276 (314)
Q Consensus 246 l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~ 276 (314)
+++|.+++....-..-.....-+.+..||+.
T Consensus 389 l~N~if~~~~l~~~~~~~~~~G~~tFlPKyL 419 (735)
T KOG3626|consen 389 LSNPIFMLVVLASVIESLAITGYITFLPKYL 419 (735)
T ss_pred hcCchHHHHHHHHHHHHHHHhhHHHhhHHHH
Confidence 8998777766544333333344456677765
No 161
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.47 E-value=3.4e-06 Score=78.84 Aligned_cols=110 Identities=9% Similarity=-0.065 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-h-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.++..++..+++++.+++.||+|||+.+.++.+...+.... . ..++...+.+..++.|++.+..++....++.+..
T Consensus 280 ~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 357 (405)
T TIGR00891 280 VVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYF-- 357 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhC--
Confidence 44555667788889999999999999998887654332222 2 2344555555657777777666666666666654
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
|+++||+.+|+.+....+|..+||++.+.+.+..
T Consensus 358 --------~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 391 (405)
T TIGR00891 358 --------PTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRL 391 (405)
T ss_pred --------CcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6789999999999999999999999999887754
No 162
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.46 E-value=8.6e-06 Score=79.72 Aligned_cols=116 Identities=19% Similarity=0.160 Sum_probs=86.0
Q ss_pred ChhHHHHHHHHHHHHHHHhhH----HHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccch
Q 021342 59 NLGTISLGILYTSFTCFSLVA----SLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEG 133 (314)
Q Consensus 59 ~~g~~~~~~~~~~~~~~~~~~----~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~ 133 (314)
+.+....+++..++++|.+.+ +.+.+++++++.+..+.+.+++..+.. +.++.+..+++-++.|++.....+...
T Consensus 250 ~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~ 329 (524)
T PF05977_consen 250 GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLN 329 (524)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666777776666654 556677777788888888887665554 677888777788888888776655544
Q ss_pred hhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 134 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 134 ~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
+.+-.. .|++.|||.++++......++.+|.++.|.+.+..
T Consensus 330 t~~Q~~----------~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 330 TLVQLS----------VPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHh----------CCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 433333 37899999999999999999999999999987764
No 163
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.46 E-value=1.6e-05 Score=74.94 Aligned_cols=105 Identities=8% Similarity=-0.017 Sum_probs=74.4
Q ss_pred HHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h-----chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~-----~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
......++.++.+.+.||+|+|+.+.++.+...+..... . .+++..+++.-++.|+|.+...+.........
T Consensus 260 ~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-- 337 (406)
T PRK15402 260 VFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-- 337 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh--
Confidence 344566778889999999999999888876554322221 1 12445566677889999887665443332221
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
++++||+..+.+......|..+|+.+++.+...
T Consensus 338 ---------~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 338 ---------SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred ---------ccccccHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 348999999999999999999999998887544
No 164
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.46 E-value=8.3e-06 Score=78.37 Aligned_cols=132 Identities=14% Similarity=-0.042 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHhhHHHHHHhh--chhhHH-HHHHHHHHHHHHhh-h--chhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 66 GILYTSFTCFSLVASLVVRVL--GSKNAL-ILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~--G~k~~l-~~g~~~~~~~~~~~-~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
++..++..++.++++.++||+ |||... +.......+..+.. . ..+....+.+.++.|.+..........+..+.
T Consensus 296 ~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 375 (452)
T PRK11273 296 FLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALEL 375 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 344455567788899999999 555432 22222222222211 1 12333333344444443222211222233343
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhH-HHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhc
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQF-VGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 213 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 213 (314)
. |+++||+++|++.....+|.. +||.+.+.+.++. +|+. .|.+..++++++++....+
T Consensus 376 ~----------p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-----g~~~-~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 376 A----------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-----GWDG-GFMVMIGGSILAVILLIVV 434 (452)
T ss_pred c----------ChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-----cchH-HHHHHHHHHHHHHHHHHHH
Confidence 3 678999999999888888765 4798888887654 3543 3545555556665555433
No 165
>PRK10054 putative transporter; Provisional
Probab=98.45 E-value=9.1e-06 Score=76.76 Aligned_cols=120 Identities=13% Similarity=0.043 Sum_probs=83.6
Q ss_pred HHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc-hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCC
Q 021342 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHE 151 (314)
Q Consensus 74 ~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~-~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~ 151 (314)
..+++.+.+.||.++|+.+..+...+.+..... +. ++.+.++++.++.|+|.+...+....++.+.. |
T Consensus 259 ~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~----------p 328 (395)
T PRK10054 259 SLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIA----------P 328 (395)
T ss_pred eehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC----------C
Confidence 344567889999999999988887666544443 22 45666667889999999887777666666654 6
Q ss_pred ccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 021342 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (314)
Q Consensus 152 ~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 210 (314)
++.|+++++... ...+|..+||.+++.+.++.+ ....|.+...+..++.++.
T Consensus 329 ~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g------~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 329 PGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP------PWSLFVILALAIVAAWLLM 380 (395)
T ss_pred cccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC------hhhHHHHHHHHHHHHHHHH
Confidence 678899888654 455899999999999987653 2344555444444444433
No 166
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.45 E-value=1.4e-05 Score=73.03 Aligned_cols=114 Identities=13% Similarity=0.034 Sum_probs=77.6
Q ss_pred CChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhH
Q 021342 58 GNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 58 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i 136 (314)
........+.....+.++.++.+++.||+|+|+.+.++..+-.+..+.. ..++...++ +-++.|++.+..++..-+..
T Consensus 177 ~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~-~~~l~g~~~s~i~P~~~s~a 255 (310)
T TIGR01272 177 EDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMW-FVLALGLFNSIMFPTIFSLA 255 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 3334455778888999999999999999999998887776555443332 223333332 44578999999888765444
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
.+.. +++.+++.++. ....+|..++|.+.+.+.+..
T Consensus 256 ~~~~-----------~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~ 291 (310)
T TIGR01272 256 LNAL-----------GRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCL 291 (310)
T ss_pred Hhhh-----------hhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhc
Confidence 4432 24456666765 566789999999888876643
No 167
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.43 E-value=5.2e-06 Score=79.95 Aligned_cols=109 Identities=9% Similarity=-0.014 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhh---c--hhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL---F--PSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~---~--~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
.....++..++.++++.+.||+|||+.+.++..+..+...... . .+...++..-++.|+|.+..++.......+.
T Consensus 297 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~ 376 (485)
T TIGR00711 297 ILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSG 376 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4455567778888899999999999999888876654333221 1 2344555667889999887765443333332
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
. |+++||++.+++.....+|..+|+.+.+.+.++
T Consensus 377 ~----------~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 377 L----------PPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred C----------CHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 668999999999999999999999998887654
No 168
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.43 E-value=9.5e-06 Score=76.90 Aligned_cols=109 Identities=15% Similarity=0.095 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hch-hhhHHHHHHHHhhhhhh--hhhccchhhHhHhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP-SWYTMVPASLYLGFAAS--IIWVGEGTYLTAAA 140 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~-~~~~l~~~r~l~G~g~~--~~~~~~~~~i~~~~ 140 (314)
.++..++..+++++.+.+.||+|||+.+..+.+...+..... ..+ +....+ .-++.|++.. ........++.+..
T Consensus 272 ~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (426)
T PRK12307 272 MTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLL-GACLFGLMATNVGVGGLVPKFLYDYF 350 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHH-HHHHHHHHHhcccHhHHHHHHHHHhC
Confidence 445556677788889999999999999888876554433322 112 211222 2233343321 11222333444443
Q ss_pred hhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
|+++||+++|+......+|..+||++.+.+....
T Consensus 351 ----------p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 351 ----------PLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred ----------cHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 6789999999999999999999999998887553
No 169
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.41 E-value=7.4e-06 Score=77.51 Aligned_cols=94 Identities=12% Similarity=-0.015 Sum_probs=68.5
Q ss_pred HHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHH
Q 021342 81 LVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFN 159 (314)
Q Consensus 81 ~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~ 159 (314)
...||++.|+.+..+.+.+.+..... ..++.+.++...++.|++.+...+...+++.+.. |+++||+.+
T Consensus 266 ~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~----------p~~~~g~~~ 335 (400)
T PRK11646 266 WSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLA----------DARARGSYM 335 (400)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcC----------Ccccchhhh
Confidence 34456776766777766655443332 4566666666777888888776666666666654 679999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 160 GEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 160 ~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
|++.....+|..+||.+++.+.++.
T Consensus 336 g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 336 GFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred hHHHHHHHHHHHhcccchHHHHHHH
Confidence 9999999999999999999987653
No 170
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.38 E-value=1.4e-05 Score=73.96 Aligned_cols=112 Identities=9% Similarity=0.003 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhh-chhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhh
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVL-GSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~-G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 140 (314)
...++..++..+++++.+++.||+ +||+.+.++.+...+..... +.++..... ..++.|++.+...+.....+.+..
T Consensus 236 ~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~ 314 (355)
T TIGR00896 236 SLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRS 314 (355)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhc
Confidence 345677778888999999999999 56767777766655444332 333222222 346789998877665444443322
Q ss_pred hhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
+++++++...++......++..+||.+.+.+.++.
T Consensus 315 ---------~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 315 ---------RQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred ---------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 13467788889888888899999999998887654
No 171
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.36 E-value=8.1e-06 Score=79.45 Aligned_cols=107 Identities=15% Similarity=-0.010 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh--hh--chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA--NL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~--~~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
....+...++++++|.+.||+|+|+.+..+.+...+.... .. .++.+..+..-++.|+|.+...+.....+.+..
T Consensus 302 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~- 380 (495)
T PRK14995 302 LPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAA- 380 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-
Confidence 3444566777888999999999999988887766543322 11 234445556778899999877665444444432
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
|+++++...+++....++|..+|+.+.+.+.+
T Consensus 381 ---------~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 381 ---------PPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred ---------CHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999888764
No 172
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.35 E-value=3.3e-05 Score=72.58 Aligned_cols=123 Identities=14% Similarity=-0.032 Sum_probs=76.3
Q ss_pred HHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hh------chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NL------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~------~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
...++.++.+++.||+|+|+.+..+.......... .. .++...++..-.+.+++.+...++..+...+..
T Consensus 256 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--- 332 (390)
T TIGR02718 256 TVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFA--- 332 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 34456778999999999999998776544221111 11 123333334444555555655444444444432
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
++++++|+.++......++|..+||.+++.+.+.. +++ ..|....++.+++.+
T Consensus 333 ------~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-----G~~-~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 333 ------GDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-----GYA-GGFLSGTVLAVLAIL 385 (390)
T ss_pred ------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----ccH-HHHHHHHHHHHHHHH
Confidence 13478899999999999999999999999887653 243 335544444444433
No 173
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.35 E-value=3.4e-05 Score=72.82 Aligned_cols=136 Identities=10% Similarity=0.066 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
++....-++.=.++|.+.+|+|+|+.++++..+.++=... .+.++.+.+.+.+.+.|+-.+....+.--|+++..
T Consensus 266 s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~f---- 341 (412)
T PF01306_consen 266 SVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHF---- 341 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 3333444444457899999999999999999988875544 58899999999999999999999999999999886
Q ss_pred hhcCCCCccchhhHHHH-HHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCc
Q 021342 145 SNHKLHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEE 217 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~-~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~ 217 (314)
|++..++...+ +..+.+.|.++.+.++|.+.++.+ .+ ..|+++..+.+...++. +.+++++
T Consensus 342 ------d~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-----~~-~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 342 ------DKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-----FQ-HTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp -------GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-----HH-HHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred ------CHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-----cH-HHHHHHHHHHHHHHHHheeeecCCC
Confidence 33444444444 345567777777788887766542 22 23555566655555554 4455543
No 174
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.35 E-value=1.2e-05 Score=85.78 Aligned_cols=108 Identities=16% Similarity=0.032 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.++..++..+++++++.+.||+++|+.+.++.++.++..+.. +.++...+++..++.|++.+...+...+++.+..
T Consensus 275 ~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 351 (1146)
T PRK08633 275 LAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRA--- 351 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcC---
Confidence 344555666778888999999999998888877766544443 4456777777889999999988777666666654
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
++++||+.+|+...+.++|.++++++++.+..
T Consensus 352 -------p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 352 -------PEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred -------CccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999888888776643
No 175
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.35 E-value=0.00014 Score=69.66 Aligned_cols=228 Identities=11% Similarity=0.025 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHhhHHHHHH----hhch-hhHHHHHHHHHHHHHHhh-hchh------hhHHHHHHHHhhhhhhhhhccch
Q 021342 66 GILYTSFTCFSLVASLVVR----VLGS-KNALILGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGEG 133 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~----~~G~-k~~l~~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~~~~~~~~~ 133 (314)
.+.=+.-++..++.|.++| |+|| ||-++.+.+.+++..... ..|+ ..-.++.-.+.|++.+..-..-.
T Consensus 55 lv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~ 134 (467)
T COG2211 55 LVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYG 134 (467)
T ss_pred HHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchh
Confidence 3444667788888888888 5776 677788888887766654 4442 23334566788888888777777
Q ss_pred hhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCC--CCCchhHHHHHHHHHHHHHHHHHH
Q 021342 134 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG--STSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 134 ~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
+..+++.+ +++||.+..+.-......|..+-..+...+.+..+.+ ..+|+ ..-+++.+++++..++.+
T Consensus 135 al~~~iT~---------d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~-~~~~~~~vi~~i~~l~~~ 204 (467)
T COG2211 135 ALGPEITQ---------DPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQ-GTALVLGVIGVILLLFCF 204 (467)
T ss_pred hcchhhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHH-HHHHHHHHHHHHHHHHHH
Confidence 77777763 5689999888766666666444333322222222111 12232 112233333333333333
Q ss_pred h-ccCCccccccccccccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccccccccc-cchhh-H
Q 021342 212 F-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGVG-G 288 (314)
Q Consensus 212 ~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg-~~~ig-~ 288 (314)
+ .+|+..+++..+ ...+.++++.+. ..++++..+++....+.......+..+.+. +|..-.+| .+... +
T Consensus 205 ~~v~ER~~~~~~~~----~~~~~~~~~~~~---~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~-yy~~y~lg~~~l~~~~ 276 (467)
T COG2211 205 FNVKERVVETQPTK----TGVKLKLKDSFL---LIFKNRPLLLLLLMNLLLFIAFNIRGSIMV-YYVTYVLGDPELFAYL 276 (467)
T ss_pred HHhhcccCccccCc----ccccccHHHHHH---HHHccchHHHHHHHHHHHHHHHHHHhhhhh-eeEEEEcCChHHHHHH
Confidence 3 455433211110 001222332222 356777666665555444444444444433 44444444 22223 3
Q ss_pred HHHHHhhHhHHHHHHHHHHHHhhc
Q 021342 289 AMAVYGAFDAIFLVELLLRWLYFS 312 (314)
Q Consensus 289 ~~~~~G~~~~i~~~~~l~~~~~~~ 312 (314)
.+...+ +..+....+..|+.|.-
T Consensus 277 ~~~~~~-~~~l~~~~~~p~L~~~~ 299 (467)
T COG2211 277 LLLASG-AGLLIGLILWPRLVKKF 299 (467)
T ss_pred HHHHHH-HHHHHHHHhHHHHHHHh
Confidence 333333 33333444666665543
No 176
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.35 E-value=2.3e-06 Score=79.22 Aligned_cols=87 Identities=13% Similarity=-0.010 Sum_probs=67.3
Q ss_pred HHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h-c----------hhhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-F----------PSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~-~----------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
...++.++++.+.||+|+|+.++.+.++..+..... + . ++.+.++.+.++.|++.+..++...+++++
T Consensus 257 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 336 (356)
T TIGR00901 257 GAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSK 336 (356)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 345777889999999999999888887765543332 2 1 344567777888999999999998888888
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHh
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~ 167 (314)
.+ |+|+||+.+|++....+
T Consensus 337 ~~----------p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 337 LS----------NPKFGATQMALLSSLSA 355 (356)
T ss_pred hc----------CCCccHHHHHHHHHHHh
Confidence 76 78999999998876553
No 177
>PRK09669 putative symporter YagG; Provisional
Probab=98.34 E-value=3.3e-05 Score=74.01 Aligned_cols=112 Identities=7% Similarity=-0.029 Sum_probs=80.9
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHH-hhh--chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhh
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~-~~~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~ 146 (314)
+...++.+++++++||+|+|+.+..+.++..+... ..+ .++...+++..++.|++.+...+...++++|..|..
T Consensus 275 i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~--- 351 (444)
T PRK09669 275 IAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYE--- 351 (444)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---
Confidence 33445667789999999999999988876653222 222 235666677788999999999888888888887521
Q ss_pred cCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 147 ~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
+.++.++..|..++.+..+..+|..+|+.+++.+.+..
T Consensus 352 e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 352 EKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred hhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 01112344567788888889999999999998877644
No 178
>PRK09848 glucuronide transporter; Provisional
Probab=98.34 E-value=0.00017 Score=69.13 Aligned_cols=105 Identities=18% Similarity=0.124 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHhh----chhh-HHHHHHHHHHHHHHh-hhch-----h--hhHHHHHHHHhhhhhhhhhcc
Q 021342 65 LGILYTSFTCFSLVASLVVRVL----GSKN-ALILGTTGYWLFVAA-NLFP-----S--WYTMVPASLYLGFAASIIWVG 131 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~----G~k~-~l~~g~~~~~~~~~~-~~~~-----~--~~~l~~~r~l~G~g~~~~~~~ 131 (314)
.++.-+..++.+++.|.++||. |||+ .+..+.+...+.... +..+ + ....+..-.+.+++.+...++
T Consensus 50 ~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (448)
T PRK09848 50 LLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIP 129 (448)
T ss_pred HHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhccc
Confidence 4566678888899999999997 6555 445555433322222 2111 1 122334456678888877766
Q ss_pred chhhHhHhhhhhhhhcCCCCccchhhHHHHHHHH-----HhhhhHHHHHHHH
Q 021342 132 EGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGM-----FASHQFVGNLITL 178 (314)
Q Consensus 132 ~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~-----~~~g~~~G~li~~ 178 (314)
..+...+... +++||.+..+.-... ...+..++|+++.
T Consensus 130 ~~al~~~~~~---------~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 130 YGSLATAMTQ---------QPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HhhhhhhhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555542 456787765543322 2345556666654
No 179
>PRK15075 citrate-proton symporter; Provisional
Probab=98.34 E-value=3e-05 Score=74.11 Aligned_cols=108 Identities=15% Similarity=0.010 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHH---hh--hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA---AN--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 67 ~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~---~~--~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
+..+...+++++++.++||+|||+.++.+.+...+... .. ..++...+....++.|++.+...+....++.+..
T Consensus 282 ~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~- 360 (434)
T PRK15075 282 CVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVM- 360 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHC-
Confidence 34455567778899999999999998876543322111 11 1123333333345556666655554555666664
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHh-hhhHHHHHHHHHHHcCC
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFA-SHQFVGNLITLAVLKDD 184 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~-~g~~~G~li~~~i~~~~ 184 (314)
|+++|+..+++...... ++..++|.+.+.+.+..
T Consensus 361 ---------p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 361 ---------PAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred ---------CCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 67899999998655444 45677898888877654
No 180
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.33 E-value=4.9e-05 Score=72.65 Aligned_cols=157 Identities=13% Similarity=0.006 Sum_probs=106.7
Q ss_pred cccchhhhhHHHHHHHHHHHhhHhhhhhh---cC-CCChhHHHHHHHHH-HHHHHHhhHHHHHHhhchhhHHHHHHHHHH
Q 021342 26 YTRDVHILSCAFLLIFLAYGAAQNLETTV---NT-EGNLGTISLGILYT-SFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (314)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~i---~~-~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~ 100 (314)
+.|+...+.+..++.+.+++-...+..-. +. +.++-.......+. ...++.+++|++.+|+|+|+++.++.+.++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~ 313 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA 313 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH
Confidence 56667777777777777777655433211 11 11222212223333 333446789999999999999999999888
Q ss_pred HHHHhh-hch--hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHH
Q 021342 101 LFVAAN-LFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (314)
Q Consensus 101 ~~~~~~-~~~--~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~ 177 (314)
+..+.. +.+ +...++++.++.++|.+..++..-++++|..|. - +-++-.+.-|...+....+.-+|..+|..+.
T Consensus 314 i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDy-g--e~~TG~R~eGi~~s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 314 VGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDY-G--EWKTGVRREGIVYSGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhH-H--HHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 766654 443 677888888999999999999999999988752 1 1112234457777888888889999999888
Q ss_pred HHHHcCCC
Q 021342 178 LAVLKDDK 185 (314)
Q Consensus 178 ~~i~~~~~ 185 (314)
++++...+
T Consensus 391 g~~L~~~G 398 (467)
T COG2211 391 GWILGAIG 398 (467)
T ss_pred HHHHHHcC
Confidence 88776544
No 181
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.33 E-value=4.1e-05 Score=71.13 Aligned_cols=102 Identities=16% Similarity=0.206 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h----c-hhhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L----F-PSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~----~-~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
.+...+...++.++.+++.||+|+|+.+..+.....+..... . . ++...++...++.|++.+...+....+..+
T Consensus 248 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 327 (385)
T TIGR00710 248 FALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALE 327 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445556677788889999999999999888766554433221 1 1 234445555677888887765554443333
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHh-hhhHHHHHHH
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFA-SHQFVGNLIT 177 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~-~g~~~G~li~ 177 (314)
. .++++++..+++..... .|.+.|++++
T Consensus 328 ~-----------~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 328 D-----------FPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred c-----------CcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 24689999998877665 4566666655
No 182
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.30 E-value=2e-05 Score=75.43 Aligned_cols=136 Identities=13% Similarity=-0.068 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHH---HHHHhh-h--chhhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW---LFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~---~~~~~~-~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
..+..+...++++++++++||+|+|+....+..... +..... . ..+.......-++.|++.............+
T Consensus 293 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 372 (438)
T TIGR00712 293 YFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALE 372 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 445556677888899999999975432222322111 111111 1 1233333333344444321111111122333
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHhhh-hHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCC
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASH-QFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKE 216 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g-~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~ 216 (314)
.. ++++||++.|++....++| ..+||.+.+.+.++. ++... |.+..++.+++.+.. ++++|+
T Consensus 373 ~~----------~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 373 LA----------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-----GWDGG-FMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred hc----------ChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-----cchHH-HHHHHHHHHHHHHHHHHHHhhc
Confidence 32 6689999999998887776 578999988887654 25443 444444455555444 445553
No 183
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.30 E-value=1.4e-05 Score=77.46 Aligned_cols=136 Identities=11% Similarity=-0.010 Sum_probs=95.0
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh--h---------chhhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--L---------FPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~--~---------~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
++..++....+.+.+|++.|+++.++.+.+++..... . .++...++...++.+++.+..+.+...++++
T Consensus 299 v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 378 (468)
T TIGR00788 299 LGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLAR 378 (468)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHH
Confidence 4445555567778889999999999998887644321 1 1333445566788899999888888888888
Q ss_pred hhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCC--CCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 021342 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG--GSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (314)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 215 (314)
.. |++++|...+++.+..++|..+|+.+++.+.+..+. .+.+..+...++..+..++.+.+.+++|+
T Consensus 379 ~~----------p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 379 LC----------PSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred hC----------CCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 76 778999999999999999999999999988876541 11223333233333334445555567786
No 184
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.29 E-value=3e-05 Score=72.07 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-----hchhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
.++..+...++.++.+++.||+|+|+.+.++.....+..+.. ...+.+...++-.+.+.+.+........++.+
T Consensus 236 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (377)
T PRK11102 236 FALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILD- 314 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhc-
Confidence 445556667788889999999999999988876533221111 11223333333333333333322221111211
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHH-HhhhhHHHHHHHH
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGM-FASHQFVGNLITL 178 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~-~~~g~~~G~li~~ 178 (314)
. .++++|+..++.... +..|..+|++++.
T Consensus 315 ---------~-~~~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 315 ---------E-FPHMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred ---------c-ccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 347889988887654 3466666666643
No 185
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.29 E-value=5.4e-05 Score=72.26 Aligned_cols=136 Identities=11% Similarity=0.045 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh---h--chhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN---L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~---~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
.++......+++.+.+.++||+|||+.+.++.+...+..... . ..+....+..-.+.+++.+........+++|.
T Consensus 285 ~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 364 (432)
T PRK10406 285 MTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEM 364 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566777888999999999998877655432222111 1 11222222111222222222222344556666
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhh-hhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
. |++.|+.+.|+.+..... .....|.+.+.+. ..+ +| ...++...+..+++.+..++++++
T Consensus 365 f----------p~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~-~~g----~~-~~~~~~~~~~~~i~~~~~~~l~~~ 426 (432)
T PRK10406 365 F----------PAQVRALGVGLSYAVANALFGGSAEYVALSLK-SIG----ME-TAFFWYVTLMAVVAFLVSLMLHRK 426 (432)
T ss_pred C----------CCCccchhhhHHHHHHHHHHHhHHHHHHHHHH-HhC----CC-cHHHHHHHHHHHHHHHHHHHhhhc
Confidence 5 778999999998765443 2334667666543 221 23 333443444445555544555443
No 186
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.26 E-value=6.7e-05 Score=71.90 Aligned_cols=175 Identities=15% Similarity=0.140 Sum_probs=99.9
Q ss_pred HHHHHHHHHHhhHHHHHHhh-----chhhHHHHHHHHHHHHHHhh-hc----hhhhHHHHHHHHhhhhhhhhhccchhhH
Q 021342 67 ILYTSFTCFSLVASLVVRVL-----GSKNALILGTTGYWLFVAAN-LF----PSWYTMVPASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 67 ~~~~~~~~~~~~~~~l~~~~-----G~k~~l~~g~~~~~~~~~~~-~~----~~~~~l~~~r~l~G~g~~~~~~~~~~~i 136 (314)
+..+-+.+- ++.|.++|-+ .||+-++++.+.-.+..... .. .+.....+.-++.-+|.+..-+..-+.+
T Consensus 33 ~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~v 111 (433)
T PF03092_consen 33 LASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALV 111 (433)
T ss_pred HHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHH
Confidence 333334333 3568888866 46777777776553322221 21 2344444455666777776666666666
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
.|..++ ++++||...+..|.....|.++|..+++.+.+..+ .++. |.+...+..+..+..+++.|.
T Consensus 112 vE~~~~--------~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-----~~~~-f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 112 VELARR--------EPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-----PQGV-FLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHhhc--------CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-----CeEE-ehHHHHHHHHHHHHHHHhhhh
Confidence 666543 34559999999999999999999999888776542 3333 444444444444444444443
Q ss_pred ccccccccc----ccccc-ccchHHHHHHHHHHhhcChhHHHHHH
Q 021342 217 EDKGEKETA----DASVN-FYSYLVSLSKSITTLLADVRMLLIIP 256 (314)
Q Consensus 217 ~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~l~~~~~lll~p 256 (314)
+.+++.++. +.+.+ .....++..++.++.++.+.++....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~ 222 (433)
T PF03092_consen 178 RKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPIL 222 (433)
T ss_pred ccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 322222110 00011 11225677788888888776665443
No 187
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.24 E-value=1.5e-05 Score=72.89 Aligned_cols=100 Identities=17% Similarity=0.113 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc---hhhhHHHHHHHHhhhhhhhhhccchhhHhHhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 140 (314)
.++..+...++.++.+.++||+|+|+.+........+..... .. ++....+..-++.|++.+..++....++.+..
T Consensus 249 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 328 (352)
T PF07690_consen 249 FSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELV 328 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 455666666778889999999999888877777665544443 22 23455555778899988888777766666654
Q ss_pred hhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHH
Q 021342 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (314)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~ 174 (314)
|+++||+..|++....++|..+||
T Consensus 329 ----------~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 329 ----------PPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp ----------HTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHCC
Confidence 679999999999999999999987
No 188
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.23 E-value=5.2e-05 Score=71.59 Aligned_cols=131 Identities=10% Similarity=-0.020 Sum_probs=73.5
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh----hhc-hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~----~~~-~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
....++.++++.+.||+|+|+.+.++.++..+..+. ... ++.+.++.+-++.++..+....+..+....+.+
T Consensus 257 ~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--- 333 (402)
T PRK11902 257 AATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCN--- 333 (402)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 346678888999999999999887776654432221 122 344544444434333433333333333333321
Q ss_pred hhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 021342 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 216 (314)
++..++..+++.+...+|..+++.+++.+.+.. +|+ ..|....+++++++++....+.+
T Consensus 334 -------~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~-----G~~-~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 334 -------RSFSATQYALLSALASVGRVYVGPTSGYLVEAY-----GWP-GFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred -------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ChH-HHHHHHHHHHHHHHHHHHHHhhh
Confidence 122233445666666777776677788877654 464 44666666666666555444443
No 189
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.21 E-value=4.6e-05 Score=70.23 Aligned_cols=112 Identities=12% Similarity=-0.075 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhhch-hh-HHHHHHHH-HHHHHHhh-h--chhhhHHHHHHHHhhhhhhhhhccchhhH
Q 021342 63 ISLGILYTSFTCFSLVASLVVRVLGS-KN-ALILGTTG-YWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~l~~~~G~-k~-~l~~g~~~-~~~~~~~~-~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i 136 (314)
...++..+...++.++.+++.||.++ |+ .+...... ..+..... . ..+....+...++.|+......+....+.
T Consensus 256 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 335 (379)
T TIGR00881 256 WAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIA 335 (379)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 33455666677888889999998643 32 22221111 11111111 1 23444444556666765544433334445
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
.+.. |+++||+..|++.....+|..+||.+.+.+.++.
T Consensus 336 ~~~~----------~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 336 SELA----------PKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred HHhc----------CcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 5543 6789999999999999999999999998887654
No 190
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.21 E-value=5e-05 Score=71.17 Aligned_cols=108 Identities=7% Similarity=-0.115 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh--hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~--~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.++..+...+++++.+++.||+|+|+.+..+..+..+..+.. ..++....++..++.|++.....+.......+.
T Consensus 241 ~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--- 317 (382)
T PRK10091 241 MMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQN--- 317 (382)
T ss_pred HHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHh---
Confidence 456666778888899999999999999988876655433222 233434444455555665443322211111111
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
.++++.++.. ......++|..+||.+++.+.+.
T Consensus 318 ------~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 318 ------AKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred ------CCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc
Confidence 1233445544 34567889999999999988764
No 191
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.18 E-value=3.3e-05 Score=82.57 Aligned_cols=109 Identities=15% Similarity=-0.013 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhc--------------------hhhhHHHHHHHHhh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLF--------------------PSWYTMVPASLYLG 122 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~--------------------~~~~~l~~~r~l~G 122 (314)
..+...++..+++++.+.++++.++++.+..+.++..+..+. .+. ++.+.++++.++.|
T Consensus 266 ~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 345 (1140)
T PRK06814 266 FLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLA 345 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHH
Confidence 355666777888888899998888777666555544332221 111 45566677888899
Q ss_pred hhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 123 FAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 123 ~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
++.+...+...+++.+.. ++++||+.+|.+....++|..+|+++.+.+..
T Consensus 346 ~~~~~~~~~~~~~~~~~~----------p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 346 AAGGLYIVPLFAALQAWA----------NPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHhHHHHHHHHHhhC----------CcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888777666666654 78999999999999999999999999887753
No 192
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.17 E-value=5.8e-05 Score=73.04 Aligned_cols=111 Identities=10% Similarity=-0.067 Sum_probs=79.2
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-h-----chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~-----~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
+...++.++++++.||+|+|+++.++..+..+..+.. . ..+...+++.-++.|++.+..++...++++|..|..
T Consensus 277 i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~ 356 (473)
T PRK10429 277 AANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYG 356 (473)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4555667778999999999999988776544322221 1 234555666778899999999888888899887531
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
. .++-.+..|..++....+..+|..+|+.+.+.+...
T Consensus 357 e---~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 357 E---YKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred h---HhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011224456688999888999999999998887653
No 193
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.17 E-value=5e-05 Score=73.59 Aligned_cols=136 Identities=11% Similarity=-0.050 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhh-------HHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKN-------ALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTY 135 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~-------~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~ 135 (314)
..++..++..++.+++|+++||+|||. .+.+..+.-.+.... ...++....++.-++.|++.+.......++
T Consensus 293 ~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 372 (476)
T PLN00028 293 IAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGI 372 (476)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 345666778888999999999999762 222222211111111 122333333333444455433322222222
Q ss_pred HhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 021342 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (314)
Q Consensus 136 i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 215 (314)
+.+. .++++|...|+......+|.+++|.+ ....+ ..+|+.. |....++.+++.++.++++.
T Consensus 373 ~~~~-----------~~~~~g~~~g~~~~~g~lg~~i~~~l----~~~~~--~~~y~~~-f~~~~~~~~i~~~~~~~~~~ 434 (476)
T PLN00028 373 VPFV-----------SRRSLGVISGLTGAGGNVGAVLTQLL----FFTGS--SYSTETG-ISLMGVMIIACTLPVAFIHF 434 (476)
T ss_pred Cccc-----------ChhhchhhhhhhhccccHHHHHHHHH----HHhcC--CccHhhH-HHHHHHHHHHHHHHHHheec
Confidence 2222 24688998888755555555555543 22111 1135433 55556666667776777665
Q ss_pred Cc
Q 021342 216 EE 217 (314)
Q Consensus 216 ~~ 217 (314)
+.
T Consensus 435 ~~ 436 (476)
T PLN00028 435 PQ 436 (476)
T ss_pred cc
Confidence 43
No 194
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.16 E-value=0.0012 Score=63.69 Aligned_cols=285 Identities=12% Similarity=0.067 Sum_probs=139.8
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhhhhhcCCC---ChhHHH---HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEG---NLGTIS---LGILYTSFTCFSLVASLVVRVLGSKNALILGTTG 98 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~---~~g~~~---~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~ 98 (314)
.+.|.++.+.+.++++..+|.-.-.+-+++..+. +...+. .....-+..+..++-+.+++|++|++.+-.-...
T Consensus 4 ~E~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 4 HELKKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 4567888889999999999987777766654321 112222 1111112222245567899999999988776666
Q ss_pred HHHHHHhh---hchhhhHH------------HHHHHHhhhhhhhhhccchhh-HhHhhhh-------hhhhcCCCCccch
Q 021342 99 YWLFVAAN---LFPSWYTM------------VPASLYLGFAASIIWVGEGTY-LTAAALS-------HASNHKLHEGTVI 155 (314)
Q Consensus 99 ~~~~~~~~---~~~~~~~l------------~~~r~l~G~g~~~~~~~~~~~-i~~~~~~-------~~~~~~~~~~~~r 155 (314)
+..+.+.+ ++|+...+ .+.++..-+..-..|+...-| .++.+.. -+-..|....+|-
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa 163 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA 163 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 65444332 22221110 000000000000111111100 0111100 0011223356788
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHHHcCCC---CCCCCchhHH---HHHHHHHHHHHHHHHHhccCCcccccc--c--cc
Q 021342 156 GSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLL---FIVFLGVITLGTILMCFLRKEEDKGEK--E--TA 225 (314)
Q Consensus 156 g~~~~~~~~~~~~g~~~G~li~~~i~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~--~--~~ 225 (314)
.|..+++....++|.++|+.+..++.+..+ .....|...+ ..+.+++..+.+.+...+.+....+++ + ++
T Consensus 164 kRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 243 (472)
T TIGR00769 164 KRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALK 243 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhc
Confidence 899999999999999999988776653211 1111231111 122222222233333333221111000 0 00
Q ss_pred cccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccccc----cccccccchhhHHHHHHhhHhHHHH
Q 021342 226 DASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI----VTPALGVSGVGGAMAVYGAFDAIFL 301 (314)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~~~----~~~~lg~~~ig~~~~~~G~~~~i~~ 301 (314)
+...+++.+.++.+|. .+++|.++.+...++..++...+.....-... .++.=-....|-.-...|+...+.+
T Consensus 244 ~~k~k~k~~~~es~k~---i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~ 320 (472)
T TIGR00769 244 EKKVKPKMSTMESLKF---LVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMM 320 (472)
T ss_pred cccCCCCCCHHHHHHH---HHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111123344454443 57888888888777777777776665433211 1111113333445556677776777
Q ss_pred HHHHHHHHhhcC
Q 021342 302 VELLLRWLYFSG 313 (314)
Q Consensus 302 ~~~l~~~~~~~~ 313 (314)
+.. +|++|.-|
T Consensus 321 l~~-~~l~~~~G 331 (472)
T TIGR00769 321 LLS-GNVIRKYG 331 (472)
T ss_pred HHH-HHHHHHhh
Confidence 766 88887665
No 195
>PRK11043 putative transporter; Provisional
Probab=98.15 E-value=0.00011 Score=69.27 Aligned_cols=103 Identities=13% Similarity=0.005 Sum_probs=66.4
Q ss_pred HHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-----h-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-----N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-----~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
..+..++.++.+.+.||+|+|+.+..+.+...+..+. . ..++...++..-.+.|++.+...+....+..+.
T Consensus 248 ~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 324 (401)
T PRK11043 248 TIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRP--- 324 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---
Confidence 3456667777889999999998765554443332221 1 123444455555677887777655543333322
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
.++++|++.|++......+...|+.+.+.+..
T Consensus 325 --------~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 325 --------FPQATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred --------CcccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 34689999999998877777788877776643
No 196
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.13 E-value=0.0011 Score=64.44 Aligned_cols=155 Identities=15% Similarity=0.108 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHH-HHHHHHHhh-h-chh-hhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTT-GYWLFVAAN-L-FPS-WYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~-~~~~~~~~~-~-~~~-~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
..++..+.-++-.++.|.++|+-|+|+-++.... ...+..+.. + .++ ++...+.-++.-++.+...+.-.+++-+.
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~l 154 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDL 154 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 3566667777777788999999998777765443 333334433 2 233 22222222222233333333345666666
Q ss_pred hhhhhhhcC---------CC-------CccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCC---CCCchhHHHHHHH
Q 021342 140 ALSHASNHK---------LH-------EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG---STSGTTLLFIVFL 200 (314)
Q Consensus 140 ~~~~~~~~~---------~~-------~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~---~~~~~~~~~~~~~ 200 (314)
++++.+.++ .+ .+.+|++..+.=++...+|.++--+++..+....+.. ..+-|...-+...
T Consensus 155 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ 234 (477)
T PF11700_consen 155 ARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVAL 234 (477)
T ss_pred cCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHH
Confidence 643222100 00 0112388888888888888888777766665443311 1111222222222
Q ss_pred HHHHHHHHHHHhccCCcc
Q 021342 201 GVITLGTILMCFLRKEED 218 (314)
Q Consensus 201 ~~~~~~~~l~~~l~~~~~ 218 (314)
...+.++..++.+||+++
T Consensus 235 ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 235 WWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHhCCCCCC
Confidence 223445566667777644
No 197
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.11 E-value=0.00021 Score=67.38 Aligned_cols=106 Identities=13% Similarity=-0.048 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.+...++..+++++.+.+.|+.++|+++..+... .+.... ...++.+......++.|++.+...+...+.+.+.
T Consensus 247 ~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~---- 321 (393)
T PRK11195 247 QAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHR---- 321 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhh----
Confidence 4455556677777888888999998888777533 222222 2345566566677788998887665544444432
Q ss_pred hhhcCCCCccc-hhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 144 ASNHKLHEGTV-IGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 144 ~~~~~~~~~~~-rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
++++. +|+..++.....+++..+|..+.+.+.
T Consensus 322 ------~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 322 ------GHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred ------CcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 24443 799999999999999999999887664
No 198
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.09 E-value=5e-05 Score=72.40 Aligned_cols=128 Identities=9% Similarity=0.012 Sum_probs=96.7
Q ss_pred HHHhhHHHHHHh-hchhhHHHHHHHHHHHHHHhhhch---hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCC
Q 021342 74 CFSLVASLVVRV-LGSKNALILGTTGYWLFVAANLFP---SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (314)
Q Consensus 74 ~~~~~~~~l~~~-~G~k~~l~~g~~~~~~~~~~~~~~---~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~ 149 (314)
+.++++|+++|| +|+|+++++|.+.+++-.+....+ ....++++-++.++|.|..=+.....+.+...+
T Consensus 76 ~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~------- 148 (498)
T COG3104 76 LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPK------- 148 (498)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCC-------
Confidence 466789999997 599999999999998755553223 466788888999999999988888888887642
Q ss_pred CCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 021342 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (314)
Q Consensus 150 ~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 215 (314)
.+.+|-..+++|+..-++|..++|++.+.+..+. +| ..-|....+-..++++.+.+.++
T Consensus 149 -~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-----g~-~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 149 -DDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-----GW-HVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred -CCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-----CH-HHHHHHHHHHHHHHHHHHHHccc
Confidence 2334788899999999999999999999887765 35 34455555555566666655553
No 199
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.08 E-value=0.00016 Score=67.72 Aligned_cols=171 Identities=9% Similarity=0.019 Sum_probs=87.5
Q ss_pred ccchhhhhHHHHHHHHHHHhhHhhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchh---hHHHH-HHHHHHHH
Q 021342 27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSK---NALIL-GTTGYWLF 102 (314)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k---~~l~~-g~~~~~~~ 102 (314)
.++++.+.+..++....+.......++.-++.+..........+.+..+.+-.+.++||..|| +.... ..+.-++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~ 270 (368)
T TIGR00903 191 RKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDIAGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAF 270 (368)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHH
Confidence 345555555565555555554433333322222221111122222233333356777776543 33232 22211211
Q ss_pred HHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 103 VAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 103 ~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
... ....+....+..-.+.|++....++...++.+|.. |++.||+..|+......+|.+++|.+.+.+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 271 FLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFC----------DKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhc----------chhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 111 12222333333334556655555555556677765 7789999999999999999999998877665
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 021342 182 KDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (314)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 215 (314)
.+ ....|..+.+..+++.+...++++
T Consensus 341 ~~--------~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 341 SS--------AEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred cC--------HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 32 123355555555554444444444
No 200
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.06 E-value=8.1e-07 Score=87.15 Aligned_cols=62 Identities=18% Similarity=0.285 Sum_probs=3.0
Q ss_pred hhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 111 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
++.++.+.++.|+|+++.|+..-+|+.|.. ++++-+.++|++++...+|+++|-++++..++
T Consensus 141 ~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv----------~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~ 202 (539)
T PF03137_consen 141 FYVFILGQLLIGIGATPLYTLGITYIDDNV----------SKKNSPLYIGILYAMSILGPALGFLLGSFCLR 202 (539)
T ss_dssp -----------SSS----------------------------------------------------------
T ss_pred HHHHHHHHHHHhccccCCccceeeeecccc----------ccccCccchhhhhHHhhccHHHHHHHHHHHHh
Confidence 356778999999999999999999999987 45778899999999999999999999887665
No 201
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.05 E-value=0.0002 Score=67.12 Aligned_cols=105 Identities=9% Similarity=-0.012 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.+.......++.++.+++.||+|+|+.+.++.....+..... +.++....+..-.+.+.|.+..++.. ...+..
T Consensus 245 ~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~--- 319 (392)
T PRK10473 245 MALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALG--- 319 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhc---
Confidence 344555666778889999999999999998887665544432 33333333333344444444333221 111111
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
|.++|+ +...+...+++.+|+.+++.+....
T Consensus 320 -------~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 320 -------PFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred -------cCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222332 3333444566666777666665543
No 202
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.05 E-value=3.5e-05 Score=73.89 Aligned_cols=130 Identities=17% Similarity=0.225 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
.+.+++--+.=+++..+.+|+|+-.++.+++.+++.=.+. ....|+|+.++.-+++|+.-+..|.+...|++...
T Consensus 413 a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~va---- 488 (618)
T KOG3762|consen 413 ALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVA---- 488 (618)
T ss_pred hhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhC----
Confidence 4555555555667889999999999999999988763333 35678888889999999999999999999999987
Q ss_pred hhcCCCCccchhhHHHHHHHHH-hhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 021342 145 SNHKLHEGTVIGSFNGEFWGMF-ASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~~-~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
||+.|..+.+++...+ .+|-.+|.+||+.+.... |.+..|..+.+.+++.++++.
T Consensus 489 ------Pp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f------g~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 489 ------PPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF------GARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred ------CCcchHHHHHHHHHHhcccCcchhhhhhhhhheee------hhHHHHHHHHHHHHHHHHHHH
Confidence 7888888888877664 588889999998887654 234445544444444444333
No 203
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.01 E-value=0.0003 Score=67.78 Aligned_cols=171 Identities=12% Similarity=0.028 Sum_probs=88.5
Q ss_pred hhhHHHHHHHHHHHhhHhhhhhhcC----CCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-
Q 021342 32 ILSCAFLLIFLAYGAAQNLETTVNT----EGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN- 106 (314)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~l~~~i~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~- 106 (314)
.+.+.+...+.+.+....-..++.. +.+.........-....++.+.++.++||+|||+.++.+..+..+.....
T Consensus 274 ~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 274 GIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMS 353 (485)
T ss_pred HHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 3334444445544433333333332 22233344455556667778889999999999999999887654433221
Q ss_pred ----hch---hhhH--HHHHHHHhhhhhhhh-hccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHH
Q 021342 107 ----LFP---SWYT--MVPASLYLGFAASII-WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (314)
Q Consensus 107 ----~~~---~~~~--l~~~r~l~G~g~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li 176 (314)
+.. ++.. .+++-++..++.+.. -+...-+.+|.. |+..|..+++.-.+..-++..+=+..
T Consensus 354 ~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf----------~~~~R~aa~s~~~~~~w~~~fiv~~~ 423 (485)
T KOG0569|consen 354 IALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELF----------PQSARSAAQSVATAVNWLSNFIVGFA 423 (485)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhC----------CccchHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1111 122222222222211 122445566665 67889888877655554444332222
Q ss_pred HHHHHcCCCCCCCCchhHHHHHHHHHHHHHH-HHHHhccCCccc
Q 021342 177 TLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEEDK 219 (314)
Q Consensus 177 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~ 219 (314)
-..+.+.. ....|+.+.+.+++.. .+...+|||+.+
T Consensus 424 fp~l~~~~-------g~~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 424 FPPLQNVI-------GPYVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHh-------cchhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 22222222 1244666766666544 445679998754
No 204
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.98 E-value=8.6e-05 Score=68.40 Aligned_cols=123 Identities=18% Similarity=0.153 Sum_probs=82.3
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hc--hhhh--HHHHHHHHhhhhhhhhhccchhhHhHhhhhhh
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF--PSWY--TMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~--~~~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~ 144 (314)
+.-.-|.++.+.++||+|||++|..+.+.+.+|.... .. +|.+ .++.+|++.-.+. .+...|--+++
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~f----qvaYvYtPEVy---- 463 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAF----QVAYVYTPEVY---- 463 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchh----eEEEEecCccc----
Confidence 3444566789999999999999999999998887763 32 3443 4446666644333 33455555554
Q ss_pred hhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 021342 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (314)
Q Consensus 145 ~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 214 (314)
|...|+...|.-..+.-+|.++.|+++ ...... .+ .. -.+..++.+++.+..+++|
T Consensus 464 ------PTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s----~s--l~-i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 464 ------PTAVRATGVGTCSSMARIGGIFSPVIA-MRAELS----TS--LP-IFVYGALFILAGIAVCFFP 519 (528)
T ss_pred ------chhhhhcchhhhhhHHhhhhhhhhHHH-HHhccc----ee--eh-HHHHHHHHHHHHHHheeee
Confidence 678999999999999999999999998 222211 11 12 2344555566666666666
No 205
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.95 E-value=0.0012 Score=62.40 Aligned_cols=102 Identities=12% Similarity=-0.009 Sum_probs=65.4
Q ss_pred HHHHHHhhHHHHHHhhchhhHHHHHHHHHHHH-HHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcC
Q 021342 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLF-VAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~-~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~ 148 (314)
+..+++++.+.+.||.+ |+.++.+....... .+. ...++.+.+.+..++.|++.+...+...+++.+..
T Consensus 264 ~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~-------- 334 (394)
T PRK10213 264 ASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL-------- 334 (394)
T ss_pred HHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHC--------
Confidence 44455566777788854 44444444333222 222 23345666667788899888776555444444432
Q ss_pred CCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 149 ~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
++++++..+++....++|..+|+.+++.+.+..
T Consensus 335 ---~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~ 367 (394)
T PRK10213 335 ---ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNI 367 (394)
T ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 255677778888888999999999999997654
No 206
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.95 E-value=0.00039 Score=66.91 Aligned_cols=138 Identities=15% Similarity=0.086 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhhchhhHH--------HHHH--HHHHHHH--HhhhchhhhHHHHHHHHhhhhhhhhhcc
Q 021342 64 SLGILYTSFTCFSLVASLVVRVLGSKNAL--------ILGT--TGYWLFV--AANLFPSWYTMVPASLYLGFAASIIWVG 131 (314)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~l~~~~G~k~~l--------~~g~--~~~~~~~--~~~~~~~~~~l~~~r~l~G~g~~~~~~~ 131 (314)
..++.+++..++.++.++++||+++|+.. ..+. ++..+.. ......+....+..-.+.|.+.+...+.
T Consensus 302 ~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 381 (465)
T TIGR00894 302 LSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAG 381 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhh
Confidence 34567788888899999999998765321 1111 1111111 1111222333332333334333332222
Q ss_pred chhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 021342 132 EGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 132 ~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
......+. .++.+|...++......+|..++|.+.+.+.+..+ ..+|. ..+.+..+..+++.++..
T Consensus 382 ~~~~~~~~-----------~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~--~~~~~-~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 382 VLINSLDL-----------APRFLGFIKGITGLPGFIGGLIASTLAGNILSQDS--KNVWL-IVFLIMAFVNILCVIFYL 447 (465)
T ss_pred hhhchhhc-----------ChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC--chHHH-HHHHHHHHHHHHHHHHee
Confidence 21112222 23578999999988888888888888776654321 01243 334444555555555554
Q ss_pred hccC
Q 021342 212 FLRK 215 (314)
Q Consensus 212 ~l~~ 215 (314)
++++
T Consensus 448 ~~~~ 451 (465)
T TIGR00894 448 IFGS 451 (465)
T ss_pred eeec
Confidence 4443
No 207
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.94 E-value=0.00049 Score=60.85 Aligned_cols=125 Identities=16% Similarity=0.170 Sum_probs=71.4
Q ss_pred HhhHHHHHHhhchhhHHHHHHHHHHH-HHHhh------hc-hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhc
Q 021342 76 SLVASLVVRVLGSKNALILGTTGYWL-FVAAN------LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (314)
Q Consensus 76 ~~~~~~l~~~~G~k~~l~~g~~~~~~-~~~~~------~~-~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~ 147 (314)
.+++|.+.|++|++.++.+|.+...+ |.... .. ++.+.+.....+.|.+.+..-+ +.+++..-
T Consensus 53 G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~t--a~lvt~~~------- 123 (250)
T PF06813_consen 53 GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNT--ASLVTCVR------- 123 (250)
T ss_pred cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhh--HHHHHHHH-------
Confidence 47899999999999999888864322 22211 11 3556666666666666544322 33333321
Q ss_pred CCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 148 ~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
| .|++||...|+--....++..+=..+...+..+. -...++.......+++++..+++++.+
T Consensus 124 N--FP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~------~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 124 N--FPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD------PSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred h--CccccCceehhhhHHHHhHHHHHHHHHHHHcCCC------hHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 2 5679999999988888877655444443443331 123222222233344555556666543
No 208
>PRK11462 putative transporter; Provisional
Probab=97.92 E-value=0.00028 Score=68.14 Aligned_cols=114 Identities=9% Similarity=-0.094 Sum_probs=70.3
Q ss_pred HHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHH-HHHhhhch--hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAANLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 67 ~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~-~~~~~~~~--~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
+..+...++.++++++.||+|+|+++..+.....+ .....+.+ +...+++.-++.|++.+...+.+.++++|..|.+
T Consensus 271 ~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~ 350 (460)
T PRK11462 271 TYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYG 350 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 33344556677899999999999987755443322 11222222 2223344456678887776666667778776521
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
+. ++-++.-|..++.+..+..+|..+|+.+++.+...
T Consensus 351 -e~--~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 351 -EW--CNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred -HH--hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11223345556777778889999999998887753
No 209
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.91 E-value=0.00028 Score=68.49 Aligned_cols=64 Identities=17% Similarity=0.134 Sum_probs=55.3
Q ss_pred hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 109 PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 109 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
.|.+.+++..++.|+|+....+...+++++.+ |++.||+++|++.....+|..+|+.+......
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~a----------P~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLSWWTKIA----------PQRLMGQMLGMWFLAQAMGSLLGGYLATFGAV 442 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 47888889999999999999888888888876 77999999999999999999998888765543
No 210
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.89 E-value=3.7e-06 Score=74.64 Aligned_cols=131 Identities=15% Similarity=0.284 Sum_probs=96.2
Q ss_pred HHHHhhHhhhhhhcCCCChhHHHHHHHHHHHH----HHHhhHHHHHH-hhchhhHH----HHHHHHHHHHHHhhhchhhh
Q 021342 42 LAYGAAQNLETTVNTEGNLGTISLGILYTSFT----CFSLVASLVVR-VLGSKNAL----ILGTTGYWLFVAANLFPSWY 112 (314)
Q Consensus 42 ~~~~~~~~l~~~i~~~~~~g~~~~~~~~~~~~----~~~~~~~~l~~-~~G~k~~l----~~g~~~~~~~~~~~~~~~~~ 112 (314)
.+|+.-..+|.+++.|.++.+....++|..|. +-|++.|.+.| ++|.|+-- ++-.++-.+|.++...+.++
T Consensus 58 fcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw 137 (459)
T KOG4686|consen 58 FCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFW 137 (459)
T ss_pred eecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 35666677888887777776666667776665 55677888877 45555432 22233345566666778999
Q ss_pred HHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 113 TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 113 ~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
+++.+|++.|+|+-.+-++|..|...++ ..+|.+..+|++....-+|+.+.-.+..++..
T Consensus 138 ~M~~GRF~FGIGgESlAVaQN~yav~wF----------KGKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 138 TMLAGRFLFGIGGESLAVAQNKYAVYWF----------KGKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred HHHhhheeeccCchhhhhhhcceeEEEe----------cCccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 9999999999999988889999988886 46899999999998888888776555555543
No 211
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.88 E-value=0.00061 Score=63.92 Aligned_cols=125 Identities=17% Similarity=-0.040 Sum_probs=82.0
Q ss_pred HHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh--hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhc
Q 021342 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (314)
Q Consensus 70 ~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~--~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~ 147 (314)
+...++++++|.+.|| +.|+++........+..+.. ...+....++.-++.|++.++. ...+..+..+
T Consensus 258 v~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~---~~~~~~~~a~------ 327 (394)
T COG2814 258 IAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPA---LQGLQTRLAR------ 327 (394)
T ss_pred HHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhh---hhHHHHHhcc------
Confidence 3445677788999999 99999988876665444332 3344555555556666666554 3344555442
Q ss_pred CCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 021342 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 148 ~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (314)
..|+.++...+++.+++|+|..+|..+++.+.++.+ +... .++.....+++..+.+.
T Consensus 328 --~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-----~~~~-~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 328 --LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-----YAAT-GWVGAALLLLALLLALL 384 (394)
T ss_pred --cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----hHHH-HHHHHHHHHHHHHHHHH
Confidence 135789999999999999999999999999987642 3322 33334444445544433
No 212
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.88 E-value=0.00025 Score=62.06 Aligned_cols=119 Identities=18% Similarity=0.082 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhch--hhhHHHHHHHHhhhhhhhhhccchhhHhH
Q 021342 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (314)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~--~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 138 (314)
....+.......+++++.|.+.|++|||+.+..+...+....+. .+.+ +...++..|++.|++.+..++....++.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 121 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSE 121 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34466777777888889999999999998888888654333222 2333 47888889999999999888888888888
Q ss_pred hhhhhhhhcCCCCc-cchhhHHHHHHH-HHhhhhHHHHHHHHHHHcCCCCCCCCchh
Q 021342 139 AALSHASNHKLHEG-TVIGSFNGEFWG-MFASHQFVGNLITLAVLKDDKGGSTSGTT 193 (314)
Q Consensus 139 ~~~~~~~~~~~~~~-~~rg~~~~~~~~-~~~~g~~~G~li~~~i~~~~~~~~~~~~~ 193 (314)
.. ++ ++|+...+.... ....|..+|+++++.+... ...+|+.
T Consensus 122 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 165 (338)
T COG0477 122 WF----------PEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA---LLWGWRA 165 (338)
T ss_pred hc----------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHH
Confidence 75 33 478888888888 5788889999887766654 1235765
No 213
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.85 E-value=0.005 Score=58.14 Aligned_cols=129 Identities=17% Similarity=0.167 Sum_probs=85.1
Q ss_pred HHHhhHHHHHHhhchhhHHHHHHHHHHHHHH-hhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCc
Q 021342 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEG 152 (314)
Q Consensus 74 ~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~-~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 152 (314)
..-++...+.|.+|.|++++++.+++.+.-. ..+.++...+-+.-++-|++.+. .-+|-+.+.. . -++
T Consensus 56 ~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~----evay~sYiys---~----v~~ 124 (412)
T PF01770_consen 56 AFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA----EVAYYSYIYS---V----VDK 124 (412)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH----HHHHHHHhee---e----cCH
Confidence 3445677899999999999999998765443 34668888888888999988775 3344444431 1 134
Q ss_pred cchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 021342 153 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (314)
Q Consensus 153 ~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 217 (314)
++--+..+.--++...|-.+|.++|-.+....+ .+.....| +......++.++.+++|.++
T Consensus 125 ~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~---~sy~~L~~-isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 125 EHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG---VSYFQLNY-ISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHHH-HHHHHHHHHHHHHHHcCCCC
Confidence 555566777777777787888877766554321 12333333 33455566777788898765
No 214
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.81 E-value=3.6e-05 Score=72.55 Aligned_cols=180 Identities=11% Similarity=0.080 Sum_probs=105.6
Q ss_pred cchhhhhHHHHHHHHHHHhhHhhhhhhcC----C--CChh--HHHHHHHHHHHHH-----HHhhHHHHHHhhchhhHHHH
Q 021342 28 RDVHILSCAFLLIFLAYGAAQNLETTVNT----E--GNLG--TISLGILYTSFTC-----FSLVASLVVRVLGSKNALIL 94 (314)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~l~~~i~~----~--~~~g--~~~~~~~~~~~~~-----~~~~~~~l~~~~G~k~~l~~ 94 (314)
|+.+..+...+++=.++.+..-.++++-. . .+.- ....+......+. +-++...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 44555555666665566655544444421 1 1111 1112333333333 33455679999999999999
Q ss_pred HHHHHHHHHHh-h-hch---hhhHHHHHHHHhhhhhhh-hhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhh
Q 021342 95 GTTGYWLFVAA-N-LFP---SWYTMVPASLYLGFAASI-IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (314)
Q Consensus 95 g~~~~~~~~~~-~-~~~---~~~~l~~~r~l~G~g~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~ 168 (314)
|.++++++.+. . -|+ +-...++.-.+..+.+-. .-+....+.++++ |..-||..-|+-.+...+
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~F----------ParvR~t~hGIsAA~GK~ 453 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIF----------PARVRSTCHGISAASGKA 453 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhc----------hHHHhhhhhhHHHHhccc
Confidence 99998775554 2 333 222222222333333321 1122455566665 778999999999999999
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 169 HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 169 g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
|.++|...-..+.++.-. ...+-...++++.++..++++..+++||+..
T Consensus 454 GAivg~~~F~~~t~~~yp-~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 454 GAIVGAFGFLYLTDHNYP-PNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred hHHHHHHHhhHhhhccCC-ccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 999988776666552210 0112233467778888889998899998754
No 215
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.79 E-value=0.0043 Score=58.17 Aligned_cols=102 Identities=15% Similarity=0.022 Sum_probs=69.2
Q ss_pred HHHHhhHHHHHHhhc-----hhhHHHHHHH-HHHH--HHHhh----hch--------hhh---HHHHHHHHhhhhhhhhh
Q 021342 73 TCFSLVASLVVRVLG-----SKNALILGTT-GYWL--FVAAN----LFP--------SWY---TMVPASLYLGFAASIIW 129 (314)
Q Consensus 73 ~~~~~~~~~l~~~~G-----~k~~l~~g~~-~~~~--~~~~~----~~~--------~~~---~l~~~r~l~G~g~~~~~ 129 (314)
+......|..+|+.+ ||.-++++.. .... ..+.+ +.. .+. ....+-.+.|+|.+..-
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 344567888999999 8877766443 2221 11111 111 221 22234456777777766
Q ss_pred ccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
++-.+.++|.+ +|++|++..++.|.....|.+++.++.+.+.++.
T Consensus 108 T~~lALl~D~~----------~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 108 TSFLALLADLA----------PEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred HHHHHHHHhcC----------CHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 66666666665 7899999999999999999999999988887765
No 216
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.78 E-value=0.0013 Score=62.62 Aligned_cols=106 Identities=5% Similarity=-0.173 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
.+.....+.++.++++++.||+++|+++.+..++-.+..+.. ..++...+ .+-++.|++.++.|+.......+..
T Consensus 275 ~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~-~~l~~~glf~s~~fp~i~sl~~~~~--- 350 (410)
T TIGR00885 275 NIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGL-YCLTLCSAFMSLMFPTIYGIALKGL--- 350 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHHHHHHHHHHhhh---
Confidence 455567889999999999999999998877776655444433 44443343 4557889999999987665555443
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
+ ++.... +........|..++|.+.+.+.++
T Consensus 351 -------g-~~~~~~-s~~l~~~~~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 351 -------G-QDTKYG-AAGLVMAIIGGGIVPPLQGFIIDM 381 (410)
T ss_pred -------h-hhhhhh-HHHHHHHHhccchHHHHHHHHHHH
Confidence 1 222222 222333449999999998888774
No 217
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.77 E-value=0.00041 Score=65.88 Aligned_cols=110 Identities=5% Similarity=-0.218 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhH-HHHHHHHHHHHHH-hhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNA-LILGTTGYWLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~-l~~g~~~~~~~~~-~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
.+...++..++.++.+.++||+|+|+. +....+...+... ....++....+.+-.+.++|.... ...+..
T Consensus 285 ~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~----- 356 (412)
T TIGR02332 285 AAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSA---MAIFWT----- 356 (412)
T ss_pred hhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhh---hhHHHh-----
Confidence 455566777788899999999997764 3333322222111 111222221111112222222111 111111
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
...+..++++|++++|+.....++|.++||.+.+.+....
T Consensus 357 --~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~ 396 (412)
T TIGR02332 357 --TPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDAT 396 (412)
T ss_pred --hcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccC
Confidence 1112236789999999999999999999999887776543
No 218
>PRK10133 L-fucose transporter; Provisional
Probab=97.74 E-value=0.0015 Score=62.75 Aligned_cols=110 Identities=7% Similarity=-0.181 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 61 GTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 61 g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
.........++..+++++.+++.||+|+|+++..+.++-....... +.++... +..-.+.|++.+..++.......+.
T Consensus 297 ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~glg~~~i~P~~~s~a~~~ 375 (438)
T PRK10133 297 AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQYPTIFSLGIKN 375 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3344567777888999999999999999999888776544333222 3344322 3345678999999887765544443
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
.+++.+.+.++... ...|..++|.+.+.+.+.
T Consensus 376 -----------~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 376 -----------LGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDA 407 (438)
T ss_pred -----------cchhhccchhHHhH-HhccchHHHHHHHHHHHh
Confidence 23445666776654 445677777776776554
No 219
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.73 E-value=0.00026 Score=69.13 Aligned_cols=171 Identities=14% Similarity=0.082 Sum_probs=114.0
Q ss_pred chhhhhHHHHHHHHHHHhhHhhhh----hhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhc--hhhHHHHHHHHHHHH
Q 021342 29 DVHILSCAFLLIFLAYGAAQNLET----TVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLG--SKNALILGTTGYWLF 102 (314)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~l~~----~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G--~k~~l~~g~~~~~~~ 102 (314)
-++.+.++..+...++.......+ +...+.......+++.-....++.++.|.+.|+.. +++...++.+.-.+.
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 445555666666666554432222 22233444555577888888899999999999999 444455555555554
Q ss_pred HHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 103 ~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
.... +.+++..++...++.|+..|....-...++.++. ..++...+.|+...+..++..+||.+++.+.
T Consensus 379 ~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~----------g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~ 448 (509)
T KOG2504|consen 379 RLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLV----------GLEKLSNAYGLLLLFQGIGALVGPPIAGLLY 448 (509)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------ChhhcchHHHHHHHHhHHHHHcCcccceeee
Confidence 4332 6678889999999999999988777766777765 4578889999999999999999999988665
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 021342 182 KDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (314)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 214 (314)
...+ ++... |....++.+++..+.++++
T Consensus 449 d~tg----~Y~~~-f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 449 DITG----NYDHA-FYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eccC----Ceeee-hhhcChHHHHHHHHHHHhH
Confidence 4332 24333 3333444444554455454
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.71 E-value=0.0027 Score=59.57 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
+.+.++...++.|++.+...+....+..+.. ++++|...+++.....+|..+|+.+++.+.
T Consensus 298 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 298 NVWTLLVPAALFFFGAGMLFPLATSGAMEPF-----------PYLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------cccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4455666778889998887766665555542 367899999999999999999999887764
No 221
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.65 E-value=0.0028 Score=61.41 Aligned_cols=145 Identities=16% Similarity=0.037 Sum_probs=91.9
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHhhch-hhHHHHHHHHHHHHHHhh-hchh---------------------hhHHHHH
Q 021342 61 GTISLGILYTSFTCFSLVASLVVRVLGS-KNALILGTTGYWLFVAAN-LFPS---------------------WYTMVPA 117 (314)
Q Consensus 61 g~~~~~~~~~~~~~~~~~~~~l~~~~G~-k~~l~~g~~~~~~~~~~~-~~~~---------------------~~~l~~~ 117 (314)
|.....+......+.+++-+++.+++|+ |.+..++.+..++..++. +.++ .+..++.
T Consensus 307 G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (477)
T TIGR01301 307 GAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIV 386 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHH
Confidence 4555555555556778888999999995 777788866655544442 2221 2444455
Q ss_pred HHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHH
Q 021342 118 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFI 197 (314)
Q Consensus 118 r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~ 197 (314)
-.+.|+.-+.....-.+++++..++ ..++.|..+|+++.+..+.+++..+..+.+..-.++ .....+.
T Consensus 387 ~~~~Gi~~A~~~siPfal~s~~~~~--------~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~----~~~~~~~ 454 (477)
T TIGR01301 387 FAILGIPLAITYSIPFALASIRSSN--------LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG----GNLPAFV 454 (477)
T ss_pred HHHhhHHHHHHHHHhHHHHHHHccc--------cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC----CCeeHHH
Confidence 6778888887766666666665310 135669999999999999999988876665443321 1233344
Q ss_pred HHHHHHHHHHHHH-HhccCCc
Q 021342 198 VFLGVITLGTILM-CFLRKEE 217 (314)
Q Consensus 198 ~~~~~~~~~~~l~-~~l~~~~ 217 (314)
+..+..+++.++. +.+|+++
T Consensus 455 ~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 455 VGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCC
Confidence 5555555555554 4567654
No 222
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.60 E-value=0.00091 Score=62.73 Aligned_cols=170 Identities=12% Similarity=0.004 Sum_probs=103.7
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhh-----hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhh--chhhHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNL-----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVL--GSKNALILGTT 97 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l-----~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--G~k~~l~~g~~ 97 (314)
.+-|.++.++++.++++........- .+.-|-+....+...+++-..--.+.+++|+++||+ |||..+.+...
T Consensus 249 L~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~ 328 (448)
T COG2271 249 LKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFM 328 (448)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHH
Confidence 46677888888888888876655422 222233334455667788888889999999999986 67766654443
Q ss_pred -HHHHHHHhh-hch--hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhh-hhHH
Q 021342 98 -GYWLFVAAN-LFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS-HQFV 172 (314)
Q Consensus 98 -~~~~~~~~~-~~~--~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~ 172 (314)
+..+..+.+ ..| |+....++-++.|+..-..--..+....|+. |++--|.+.|.-..+..+ |.+.
T Consensus 329 ~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~----------pK~AaGtA~Gf~Glf~Yl~Ga~~ 398 (448)
T COG2271 329 LLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFV----------PKKAAGTATGFVGLFAYLIGAAL 398 (448)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccc----------cHhhccchhchhhhHHHHhhHHh
Confidence 333333333 334 3466666777777776433222333334443 556778888877766666 6666
Q ss_pred HHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 021342 173 GNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (314)
Q Consensus 173 G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 210 (314)
++...+.+.+. .+|.. .|+++.+.+++++++.
T Consensus 399 a~~~~g~i~d~-----~gW~g-~Fi~~~~~a~l~~lll 430 (448)
T COG2271 399 AGLPLGYIADT-----WGWDG-GFIVLSIAALLAILLL 430 (448)
T ss_pred cCCcceeeEec-----CCCcc-hHHHHHHHHHHHHHHH
Confidence 66655555443 25754 3566666666655544
No 223
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.58 E-value=0.0045 Score=57.11 Aligned_cols=139 Identities=13% Similarity=0.075 Sum_probs=87.7
Q ss_pred HHHHHhhHhhhhhhcCCCChhHHH----HHHHHHHHHHHHhhHHHHHHhhc-hhhHHHHHHHHHHHHHHhh-hchhhhHH
Q 021342 41 FLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLG-SKNALILGTTGYWLFVAAN-LFPSWYTM 114 (314)
Q Consensus 41 ~~~~~~~~~l~~~i~~~~~~g~~~----~~~~~~~~~~~~~~~~~l~~~~G-~k~~l~~g~~~~~~~~~~~-~~~~~~~l 114 (314)
...|.....-.+++..|.+..... .++..+.-...++..|.+.+|.. +|+..+....++.+-..+. +.|....+
T Consensus 221 S~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~ 300 (395)
T COG2807 221 SLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPI 300 (395)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 333444444445554454443332 45667777788888899988654 5666666666665544444 56655555
Q ss_pred HHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchh
Q 021342 115 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 193 (314)
Q Consensus 115 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~ 193 (314)
+. .++.|+|.|...+..-..+.+-++ ++++-++-.|+-.....+=..+||.+.+.+-+..+ +|+.
T Consensus 301 lw-~~llG~G~G~~F~laL~li~~rs~---------~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g----sw~~ 365 (395)
T COG2807 301 LW-ALLLGLGQGGAFPLALTLILLRSS---------DAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG----SWSA 365 (395)
T ss_pred HH-HHHHhCccchHHHHHHHHHHhhcC---------ChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC----ChHH
Confidence 43 489999999887777666666542 45666666666555555556779999888865543 5754
No 224
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.52 E-value=0.0087 Score=57.75 Aligned_cols=175 Identities=13% Similarity=-0.007 Sum_probs=89.2
Q ss_pred cccchhhhhHHHHHHHHHHHhhHhhhhhhcCC--CChhHHH-HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHH
Q 021342 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTE--GNLGTIS-LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (314)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~--~~~g~~~-~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~ 102 (314)
+.++.+++++..++.|..|.......+....+ ++..... ..+..+...+..+++|+++||+|+|+++.++.+...+.
T Consensus 250 k~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 250 QRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIF 329 (462)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHH
Confidence 44556667776666666666544221111111 1222111 22233556677788999999999999999888765544
Q ss_pred HHh-h-hch-----hhhHHHH----HHHHhhhhhhhhhccchhhHhHhhhh-hhhhcC----------CCCccchhhHHH
Q 021342 103 VAA-N-LFP-----SWYTMVP----ASLYLGFAASIIWVGEGTYLTAAALS-HASNHK----------LHEGTVIGSFNG 160 (314)
Q Consensus 103 ~~~-~-~~~-----~~~~l~~----~r~l~G~g~~~~~~~~~~~i~~~~~~-~~~~~~----------~~~~~~rg~~~~ 160 (314)
... . ..| +.....+ .-+..|+|.|.. ...+.+++.+ ..+..+ ...+++-|...|
T Consensus 330 ~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsv----fk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G 405 (462)
T PRK15034 330 SALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGST----FQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALG 405 (462)
T ss_pred HHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHH----HHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHH
Confidence 322 1 222 2332222 223345555443 2233333321 000000 001135677888
Q ss_pred HHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 021342 161 EFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (314)
Q Consensus 161 ~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (314)
+-.+...+|..+-|.+-+...+..+ ++ ..-++.+.+..++.+.+
T Consensus 406 ~v~a~G~~Ggf~~p~~~g~~~~~~g----~~-~~~~~~~~~~~~~~~~~ 449 (462)
T PRK15034 406 FISAIGAVGGFFIPQAFGMSLNMTG----SP-VGAMKVFLIFYIVCVLL 449 (462)
T ss_pred HHHHHHHcccchhhHHHHHHHHHcC----Cc-HHHHHHHHHHHHHHHHH
Confidence 8888888888887865444444332 23 33355555555444443
No 225
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.52 E-value=0.0018 Score=63.33 Aligned_cols=89 Identities=9% Similarity=-0.018 Sum_probs=62.0
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHh-hhch---------hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCC
Q 021342 80 SLVVRVLGSKNALILGTTGYWLFVAA-NLFP---------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (314)
Q Consensus 80 ~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~---------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~ 149 (314)
+++.+|++++..+.+|.++.++..+. .... |.+.+++..++.|+|+....+....++++.+
T Consensus 341 ~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~a--------- 411 (500)
T PRK09584 341 NKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLV--------- 411 (500)
T ss_pred HHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC---------
Confidence 34444555556677777666543322 1221 2446778999999999999999888888876
Q ss_pred CCccchhhHHHHHHHHHhhhhHHHHHHHH
Q 021342 150 HEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (314)
Q Consensus 150 ~~~~~rg~~~~~~~~~~~~g~~~G~li~~ 178 (314)
|++.||+.+|.+......|..+++.+..
T Consensus 412 -P~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 412 -PQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999887776666666665554
No 226
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.51 E-value=0.0034 Score=58.83 Aligned_cols=166 Identities=14% Similarity=0.078 Sum_probs=102.4
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhhhhh-----cCCCC-hhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTV-----NTEGN-LGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTG 98 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i-----~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~ 98 (314)
.+.+|.+.+++..+..|.+|.......+.. ..+.. .|.. .+..-+.-++....+|+++||+|.++++......
T Consensus 215 ~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~-a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~ 293 (417)
T COG2223 215 FSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLI-AFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVG 293 (417)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHH-HHHHHHHHHHHHhccchhhhhccchhHHHHHHHH
Confidence 446778888888777777776655333222 22221 1222 3344455556667799999999999999888776
Q ss_pred HHHHHHhh-hc-------hh----hhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHH
Q 021342 99 YWLFVAAN-LF-------PS----WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF 166 (314)
Q Consensus 99 ~~~~~~~~-~~-------~~----~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~ 166 (314)
.++..... +. ++ ....+...++.|+|.|.. ...+..+. +++.|...|+..+..
T Consensus 294 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsv----fk~Ip~if-----------~~~~G~v~G~vga~G 358 (417)
T COG2223 294 MALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSV----FKMIPVIF-----------PKETGAVTGIVGAIG 358 (417)
T ss_pred HHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchh----eeechHHH-----------HhhhhHHHHHHHHhc
Confidence 65544432 21 11 233455667777777653 33444443 468899999998888
Q ss_pred hhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 021342 167 ASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 167 ~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
.+|..+=|..-+...+..+ ++ ...++.+..+.+++.++..
T Consensus 359 ~lGGf~lp~~~g~~~~~tg----~~-~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 359 GLGGFFLPLAFGVSLDLTG----SY-TGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred cccccchhHHHHHHHHhcc----cH-HHHHHHHHHHHHHHHHHHH
Confidence 8888777766665555442 23 3445566666666655543
No 227
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.43 E-value=0.11 Score=50.70 Aligned_cols=284 Identities=16% Similarity=0.099 Sum_probs=135.4
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhhhhhcCCCC-hhHHHHHHHHHHH---HHHHhhHHHHHHhhchhhHHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGN-LGTISLGILYTSF---TCFSLVASLVVRVLGSKNALILGTTGYW 100 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~~-~g~~~~~~~~~~~---~~~~~~~~~l~~~~G~k~~l~~g~~~~~ 100 (314)
.+++.++.+++.++++...|.-.-.+-+++-.+.. ...+..-=.+... .+.-+.-..+++++++++++-+....|.
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 67888999999999888888876656554432222 1112111111121 1122235678999999998876666654
Q ss_pred HHHHh--h-hchhhh--------HHHHH---HHHhhhh-hhhhhccchhh-HhHhhhh------hh-hhcCCCCccchhh
Q 021342 101 LFVAA--N-LFPSWY--------TMVPA---SLYLGFA-ASIIWVGEGTY-LTAAALS------HA-SNHKLHEGTVIGS 157 (314)
Q Consensus 101 ~~~~~--~-~~~~~~--------~l~~~---r~l~G~g-~~~~~~~~~~~-i~~~~~~------~~-~~~~~~~~~~rg~ 157 (314)
.+.+. . ++|+-. .-... +.+.|+- .--.|+...-| .+|.+.. +. -..+....+|-.|
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKR 180 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKR 180 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 44333 2 343210 00001 1112211 01122221111 1121110 01 1223345678889
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHc-CCC---CCCCCchhHHHHHHHHHHHHHHHHH---HhccC-----Cccccccccc
Q 021342 158 FNGEFWGMFASHQFVGNLITLAVLK-DDK---GGSTSGTTLLFIVFLGVITLGTILM---CFLRK-----EEDKGEKETA 225 (314)
Q Consensus 158 ~~~~~~~~~~~g~~~G~li~~~i~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~l~---~~l~~-----~~~~~~~~~~ 225 (314)
..+++....++|.++|+.+...+.+ ..+ .+.+.|...+-..+.++.+.+.+.. ..+.+ +... +++..
T Consensus 181 fYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~-~~~~~ 259 (491)
T PF03219_consen 181 FYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY-PSAKK 259 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc-hhhhc
Confidence 9999999999999998887766665 111 1223354333223222322222222 22221 1110 11111
Q ss_pred cccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhcccc----ccccccccccchhhHHHHHHhhHhHHHH
Q 021342 226 DASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT----KEIVTPALGVSGVGGAMAVYGAFDAIFL 301 (314)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~----~~~~~~~lg~~~ig~~~~~~G~~~~i~~ 301 (314)
+..++++.+.++.+|. ++++|.+..+...++..|+.....-..+- ..|.++.=.....|-.....|++..+.+
T Consensus 260 ~kk~k~k~s~~es~k~---l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~ 336 (491)
T PF03219_consen 260 KKKKKPKMSLKESFKL---LLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMM 336 (491)
T ss_pred ccccCCCccHHHHHHH---HHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 1112233444444443 46778777777777666665554433321 1122221113334445555677666655
Q ss_pred HHHHHHHHhhcC
Q 021342 302 VELLLRWLYFSG 313 (314)
Q Consensus 302 ~~~l~~~~~~~~ 313 (314)
++-++.+|.-|
T Consensus 337 -~l~~~iir~~G 347 (491)
T PF03219_consen 337 -FLSSNIIRRFG 347 (491)
T ss_pred -HHHHHHHHHhh
Confidence 45566666544
No 228
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.35 E-value=0.0075 Score=58.78 Aligned_cols=100 Identities=17% Similarity=0.094 Sum_probs=72.1
Q ss_pred HHHHHHhhHHHHHHhhchhhH-------HHHHHHHHHHHHH-------hhh----chhhhHHHHHHHHhhhhhhhhhccc
Q 021342 71 SFTCFSLVASLVVRVLGSKNA-------LILGTTGYWLFVA-------ANL----FPSWYTMVPASLYLGFAASIIWVGE 132 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G~k~~-------l~~g~~~~~~~~~-------~~~----~~~~~~l~~~r~l~G~g~~~~~~~~ 132 (314)
...+.+++.+.+.+|+|+|+. +.+|.++.++..+ ... ..+.+.+++.-++.|+|++...+..
T Consensus 321 ~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g 400 (489)
T PRK10207 321 WVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALG 400 (489)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHH
Confidence 343555567789999999873 5555544322111 111 1345667788899999999998887
Q ss_pred hhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHH
Q 021342 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (314)
Q Consensus 133 ~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i 180 (314)
..++.+.+ |++.+|..+|++....++|..+|..++...
T Consensus 401 ~~~~~~~a----------P~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 401 LAMIAALV----------PQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHhC----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77777665 778999999999999999999998887655
No 229
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.35 E-value=0.014 Score=58.81 Aligned_cols=132 Identities=13% Similarity=0.045 Sum_probs=82.3
Q ss_pred HHHHHhhHHHHHH-hhchhhHHHHHHHHHHHHHHhh-hc--h------hhhHHHHHHHHhhhhhhhhhccchhhHhHhhh
Q 021342 72 FTCFSLVASLVVR-VLGSKNALILGTTGYWLFVAAN-LF--P------SWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (314)
Q Consensus 72 ~~~~~~~~~~l~~-~~G~k~~l~~g~~~~~~~~~~~-~~--~------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 141 (314)
.-+.+++++.+.| ++|+++++.++.+.+.+..+.. +. + .....+.+=++..+|.|+.-++.++...|-.+
T Consensus 36 ~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~ 115 (654)
T TIGR00926 36 CYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE 115 (654)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcC
Confidence 3345566777777 7999999999988876533321 21 1 11224455567778888887777777776542
Q ss_pred hhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCC--CCCCchhHHHHHHHHHHHHHHHHHH
Q 021342 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG--GSTSGTTLLFIVFLGVITLGTILMC 211 (314)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~ 211 (314)
+ .++++|-.++.+|+.+.++|..+++.+...+.++.+. ...+| +..|.+.++..+++.+++.
T Consensus 116 ~-------~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~-~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 116 E-------RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCY-PLAFGVPAILMILALIVFM 179 (654)
T ss_pred c-------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcch-HHHHHHHHHHHHHHHHHHH
Confidence 1 1234577888899999999999998887776533210 01235 3345555555555555544
No 230
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.22 E-value=0.013 Score=57.34 Aligned_cols=132 Identities=14% Similarity=0.004 Sum_probs=84.0
Q ss_pred HHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh-hchh--h-hHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhh
Q 021342 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS--W-YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~--~-~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~ 146 (314)
....+.+..+...+++|||+.+..+.+...+..+.. +.+. . ........+..++.+..+.....+.++..
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~------ 435 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELI------ 435 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------
Confidence 334444456789999999999999998766544443 2222 1 12444555566666665555566666654
Q ss_pred cCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCccc
Q 021342 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDK 219 (314)
Q Consensus 147 ~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~ 219 (314)
|...|+.+.+.......+|.+++|.+........ ....++.+.....+..++. +++||+...
T Consensus 436 ----pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 436 ----PTVVRNTAVGAISAAARLGSILAPLFPLLLRQMF-------PLLGLILFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------ccchHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 6678999999999999999999998876554321 1222333344444444444 789998654
No 231
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.02 E-value=0.0061 Score=56.20 Aligned_cols=90 Identities=10% Similarity=-0.005 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh--hhch---hhhH----HHHHHHHhhhhhhhhhccchhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA--NLFP---SWYT----MVPASLYLGFAASIIWVGEGTY 135 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~--~~~~---~~~~----l~~~r~l~G~g~~~~~~~~~~~ 135 (314)
.++..+...++.+++++++||+|+|+.+..+.......... .... +... ++...++.|++.+..++ +
T Consensus 267 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~ 342 (366)
T TIGR00886 267 ASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFA----L 342 (366)
T ss_pred HHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhh----c
Confidence 34445556677788999999999988777666544332222 1112 3332 33344555555555443 3
Q ss_pred HhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhh
Q 021342 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASH 169 (314)
Q Consensus 136 i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 169 (314)
+.+.. ++++|+..|++....++|
T Consensus 343 ~~~~~-----------~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 343 VPHIF-----------RRATGAVSGLVGAIGNLG 365 (366)
T ss_pred chhhc-----------hhhcccHHHHHHHhccCC
Confidence 34442 368999999887666554
No 232
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.02 E-value=7.1e-06 Score=78.45 Aligned_cols=136 Identities=18% Similarity=0.118 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-----hhchh------hhHHHHHHHHhhhhhhhhhcc-chh
Q 021342 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-----NLFPS------WYTMVPASLYLGFAASIIWVG-EGT 134 (314)
Q Consensus 67 ~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-----~~~~~------~~~l~~~r~l~G~g~~~~~~~-~~~ 134 (314)
+..+...++.+++..++||+|||+.++.+.+..++..+. ...++ ...+. .-.+..++.+..|.. ...
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~g~~~~~~~ 372 (451)
T PF00083_consen 294 ILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIV-FLALFFAFFSLGWGPLPWI 372 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce-eeeeccccccccccccccc
Confidence 333444556666779999999999999888765432221 11221 12221 111222222222222 334
Q ss_pred hHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH-HHHHhc
Q 021342 135 YLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-ILMCFL 213 (314)
Q Consensus 135 ~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l 213 (314)
+..|.. |.+.|++..++......++..+++.+...+.+..+ ....+.++.++.++.. +..+++
T Consensus 373 ~~~Elf----------Pt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~------~~~~~~i~~~~~~i~~i~~~~~l 436 (451)
T PF00083_consen 373 YTAELF----------PTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG------GWGVFLIFAGVCLIAIIFVYFFL 436 (451)
T ss_pred cccccc----------ccccccccccccccccccccccccccccccccccc------ccccchhhHHHHHHHHhheeEEE
Confidence 556654 77899999998887777777777766444433221 1222445555544444 445679
Q ss_pred cCCccc
Q 021342 214 RKEEDK 219 (314)
Q Consensus 214 ~~~~~~ 219 (314)
|||+.+
T Consensus 437 pET~g~ 442 (451)
T PF00083_consen 437 PETKGK 442 (451)
T ss_pred eeCCCC
Confidence 998654
No 233
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.01 E-value=0.025 Score=50.33 Aligned_cols=67 Identities=16% Similarity=0.242 Sum_probs=50.4
Q ss_pred HHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhcc-chhhHhHhh
Q 021342 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVG-EGTYLTAAA 140 (314)
Q Consensus 74 ~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~-~~~~i~~~~ 140 (314)
+...+.+.++||-|||+.-+.=.+.|.+..+.-..|.+..++++|++.|++.+.+..+ ..=+++++-
T Consensus 87 LFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 87 LFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 4445678999999999987766666665444445678889999999999999988777 455566553
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.97 E-value=0.078 Score=49.88 Aligned_cols=95 Identities=22% Similarity=0.263 Sum_probs=70.4
Q ss_pred hHHHH-HHhhchhhHHHHHHHHHH----HHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCc
Q 021342 78 VASLV-VRVLGSKNALILGTTGYW----LFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEG 152 (314)
Q Consensus 78 ~~~~l-~~~~G~k~~l~~g~~~~~----~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 152 (314)
..+.+ .++.++|+.-.+|+..-. ....+....+.+.+.++-++.|++.|..-++.-+.+.+.. .+
T Consensus 263 ~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt----------~~ 332 (403)
T PF03209_consen 263 LAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLT----------SA 332 (403)
T ss_pred HHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCC----------CC
Confidence 34443 447777776666665432 2223334457778888889999999998877777777765 56
Q ss_pred cchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 153 TVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 153 ~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
++.|.++|.+.+++..+..+|.++++.+.+
T Consensus 333 ~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 333 GRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999888754
No 235
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.95 E-value=0.03 Score=55.64 Aligned_cols=106 Identities=16% Similarity=0.075 Sum_probs=71.2
Q ss_pred HHHHHHHHHHhhHHHHHHhhch-hhHHHHHHHHHHHHHHhh-h--chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 67 ILYTSFTCFSLVASLVVRVLGS-KNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 67 ~~~~~~~~~~~~~~~l~~~~G~-k~~l~~g~~~~~~~~~~~-~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
....+..+++++.+.+..++++ |+.++++.+....+..+. . .+|....+..-++.|+|.|..-..... +++..
T Consensus 357 ~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~-~~ql~-- 433 (599)
T PF06609_consen 357 PVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIV-IAQLI-- 433 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHH-eeEee--
Confidence 3444556777788888888887 788788877776554443 1 234444456677888888754332222 22222
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
.|+++.|.+.|+..++..+|..+|..+...+..
T Consensus 434 -------~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 434 -------VPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred -------eCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 156789999999999999999999888665553
No 236
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.55 E-value=0.055 Score=52.96 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHH
Q 021342 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (314)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~ 104 (314)
.....+......++.+++..+.||+|||+.++.|..+..+..+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 4445566667777778889999999999999999987765443
No 237
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=96.48 E-value=0.2 Score=47.51 Aligned_cols=63 Identities=13% Similarity=0.063 Sum_probs=42.0
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
++...+.+.++.|+|.+...+..... + +. +.+..+|++.+++......+...|+..++++..+
T Consensus 311 ~~~~~~~~~~l~~~G~~~~~p~~~~~-a-l~---------~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 311 VWLWSVLGTSLYAFGIGLIFPTLFRF-T-LF---------SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHH-H-hc---------cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33334557777888888764443211 1 11 1234579999999998888899999998887655
No 238
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.32 E-value=0.017 Score=54.11 Aligned_cols=112 Identities=13% Similarity=-0.031 Sum_probs=75.7
Q ss_pred HHHHHHHHhhHHHHHHhhch-hhHHHH-HHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhh
Q 021342 69 YTSFTCFSLVASLVVRVLGS-KNALIL-GTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (314)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~G~-k~~l~~-g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~ 145 (314)
.+.+++++-+.+.+.||++. ||.+.. |++......... +.+++..+++-+...|++.+..-++....+....|.+.
T Consensus 316 ~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh- 394 (464)
T KOG3764|consen 316 SLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRH- 394 (464)
T ss_pred ccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhh-
Confidence 35677888899999999992 354443 444444433333 66788888888888888888765554444444432110
Q ss_pred hcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 146 ~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
+ +..+.-|...+++-.++.+|..+||.+++.+.+..
T Consensus 395 --~-s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 395 --V-SGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI 430 (464)
T ss_pred --c-cccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence 0 01124577889999999999999999999987654
No 239
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.16 E-value=0.041 Score=51.30 Aligned_cols=107 Identities=12% Similarity=0.042 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhhHHHHHHhhc--hhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 67 ILYTSFTCFSLVASLVVRVLG--SKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 67 ~~~~~~~~~~~~~~~l~~~~G--~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
..-+..++.+..-.|..++.. -|-++..++.+..-+.+. ...+....++.+..+--+..+..-++-...+...
T Consensus 305 ~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~---- 380 (451)
T KOG2615|consen 305 TTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKY---- 380 (451)
T ss_pred hhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhc----
Confidence 333445555655566677766 666666666554433333 3556667777777777777766544433333332
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
-++++||..+|++.....++-++||++++.+...
T Consensus 381 ------~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 381 ------GPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred ------CCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 3779999999999999999999999999877654
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.13 E-value=0.76 Score=43.58 Aligned_cols=103 Identities=9% Similarity=-0.004 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHH-HHHh--hhch--hhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAA--NLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~-~~~~--~~~~--~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
.++--+.-++-.++-|.++|+.|+|+-.+--.....+ +.++ +..+ .++..+..-++..++....-+...+++.+.
T Consensus 64 ~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~ 143 (438)
T COG2270 64 SAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRL 143 (438)
T ss_pred HHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhh
Confidence 3455555556666778899999988776655544433 2222 2234 455666666777777777766677777777
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHH
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~ 177 (314)
. ++++.++..++=|....+|+.+-.++.
T Consensus 144 ~----------~k~~~~riS~lg~~~gylgs~i~li~~ 171 (438)
T COG2270 144 T----------TKDNMGRISGLGWALGYLGSVILLIFV 171 (438)
T ss_pred c----------CccccCcccccccccccccchHHHHHH
Confidence 6 345556666666766777776655553
No 241
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.93 E-value=0.041 Score=51.48 Aligned_cols=88 Identities=9% Similarity=-0.070 Sum_probs=65.4
Q ss_pred hHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCc
Q 021342 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSG 191 (314)
Q Consensus 112 ~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~ 191 (314)
..++++-.+.++|.|..=+...++.+|-.+++ ++++|.+++.+|+...++|..++..+..++.++. +|
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~-------~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-----~~ 101 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDED-------DDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-----GW 101 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT-------TTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS------H
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhccc-------chhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-----ch
Confidence 57778888999999998888888888776431 2578889999999999999999999888887654 35
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 021342 192 TTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 192 ~~~~~~~~~~~~~~~~~l~~~ 212 (314)
..-|.+..+..+++++.++.
T Consensus 102 -~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 102 -FLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp -HHHHHHHHHHHHHHHHHHHC
T ss_pred -hhhhhHHHHHHHHHHHHHHh
Confidence 34465555555666665543
No 242
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.83 E-value=0.25 Score=46.47 Aligned_cols=114 Identities=11% Similarity=0.062 Sum_probs=78.7
Q ss_pred CChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHH-HHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhH
Q 021342 58 GNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGT-TGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYL 136 (314)
Q Consensus 58 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~-~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i 136 (314)
...+...++....+..+|.+.+.++.+|+-+.+.+.+.. ..+.++....+.++...++ +-++.|+.-++.||...+.-
T Consensus 271 ~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~-~l~~ig~F~simfPTIfsla 349 (422)
T COG0738 271 EQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALY-ALFLIGLFNSIMFPTIFSLA 349 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHHHhHHHHHHHHHHH
Confidence 344555677777888899999999999999988887766 4455555555666666665 55889999999999877666
Q ss_pred hHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
.+.. + +.....|..-+....|.++=|.+-+++.+..
T Consensus 350 l~~l----------~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~ 385 (422)
T COG0738 350 LKNL----------G--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMF 385 (422)
T ss_pred Hhcc----------C--ccccccceeeeeheecchHHHHHHHHHHHhh
Confidence 6554 2 1122223344445667777788888887664
No 243
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.60 E-value=2.4 Score=41.03 Aligned_cols=285 Identities=14% Similarity=0.064 Sum_probs=139.3
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhhhhhcCCCChhHHHHHHHHH-----HHHHHHhhHHHHHHhhchhhHHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYT-----SFTCFSLVASLVVRVLGSKNALILGTTGY 99 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~~~g~~~~~~~~~-----~~~~~~~~~~~l~~~~G~k~~l~~g~~~~ 99 (314)
..++.++.+++.+++....|+-+-.+-+++-.. ..|..+.+.+=. +..+.-++-..++++.-+.+++-+-...+
T Consensus 24 ~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~-~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F 102 (509)
T COG3202 24 YELKKFLPLALLFFCILFNYNLLRSLKDSLVVT-RQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFF 102 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhheEee-cCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 678889999999998888888777666555332 222222222211 22233344566788888877776555444
Q ss_pred HHHHHh--h-hchhhh----HHHHHHHHhhhhh----hhh-----hccchhh-HhHhhhh------hh-hhcCCCCccch
Q 021342 100 WLFVAA--N-LFPSWY----TMVPASLYLGFAA----SII-----WVGEGTY-LTAAALS------HA-SNHKLHEGTVI 155 (314)
Q Consensus 100 ~~~~~~--~-~~~~~~----~l~~~r~l~G~g~----~~~-----~~~~~~~-i~~~~~~------~~-~~~~~~~~~~r 155 (314)
..+.+. . ++|.-. -....|=+.+..- +.. |+...-| .+|.+.. +. -..+....+|-
T Consensus 103 ~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~ea 182 (509)
T COG3202 103 LGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEA 182 (509)
T ss_pred HHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 333322 2 232100 0011121221111 111 2222111 2222210 00 11122345778
Q ss_pred hhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCC-CCCchhHHHHHHHHH---HHHHHHHHHhccC-----Ccccccccccc
Q 021342 156 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGG-STSGTTLLFIVFLGV---ITLGTILMCFLRK-----EEDKGEKETAD 226 (314)
Q Consensus 156 g~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~l~~~l~~-----~~~~~~~~~~~ 226 (314)
.|..+.|....+.+..+++.+..++.++.+.- ...-...+..+++++ +++.+++...+.+ |....+...++
T Consensus 183 kRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk 262 (509)
T COG3202 183 KRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKK 262 (509)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhccc
Confidence 89999999999999988888887777654300 000001122222222 2333333333332 21100000000
Q ss_pred ccccccchHHHHHHHHHHhhcChhHHHHHHHHHHHhHHHhhhhccccc----cccccccccchhhHHHHHHhhHhHHHHH
Q 021342 227 ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK----EIVTPALGVSGVGGAMAVYGAFDAIFLV 302 (314)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~~~lll~p~~~~~g~~~~f~~~~~~~----~~~~~~lg~~~ig~~~~~~G~~~~i~~~ 302 (314)
...+.+.+..+.++. .+++|.+..+...++..|+.....-+.+-. .|....--....|-.-...|++.++..+
T Consensus 263 ~~~k~k~~~~~s~k~---i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~ 339 (509)
T COG3202 263 KKKKLKLGLIESFKM---ILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFL 339 (509)
T ss_pred ccccccCcHHHHHHH---HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122333333333 457777777777777777766666554321 1211111244445557777888788788
Q ss_pred HHHHHHHhhcC
Q 021342 303 ELLLRWLYFSG 313 (314)
Q Consensus 303 ~~l~~~~~~~~ 313 (314)
.+-++++|.-|
T Consensus 340 ~~~s~~ir~~G 350 (509)
T COG3202 340 FPGSNLIRRVG 350 (509)
T ss_pred hhhHHHHHHhh
Confidence 88888887665
No 244
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.46 E-value=0.41 Score=45.30 Aligned_cols=105 Identities=10% Similarity=0.041 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHH-----HHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHh
Q 021342 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW-----LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~-----~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 139 (314)
..+.+.|-+|-+++-.-...+.-|+..+.+.+-.. ++...+ +.|+.+.+++.-+..|+.+|..++-....+.+
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~- 362 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFFRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISE- 362 (402)
T ss_pred HHHHHHHHHHHhhhhcceeeeehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHh-
Confidence 34445666676665444444555666666554321 222223 45788888878889999998766554333322
Q ss_pred hhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHH
Q 021342 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i 180 (314)
+ .++++|...+|.-..+-+.|..++.+++..+
T Consensus 363 --------~-~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 363 --------E-VPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred --------c-CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 1 2568999999999888888888888887654
No 245
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.15 E-value=0.36 Score=46.83 Aligned_cols=137 Identities=15% Similarity=0.208 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHhhchh---------hHHHHHHHHHHHHHHhh-hch---hhhHHHHHHHHhhhhhhh
Q 021342 61 GTISLGILYTSFTCFSLVASLVVRVLGSK---------NALILGTTGYWLFVAAN-LFP---SWYTMVPASLYLGFAASI 127 (314)
Q Consensus 61 g~~~~~~~~~~~~~~~~~~~~l~~~~G~k---------~~l~~g~~~~~~~~~~~-~~~---~~~~l~~~r~l~G~g~~~ 127 (314)
|.. .++-++...+..+++|.++|+.-+| ..-.++..+-+++.+.. +.+ .+..++..-+..|+.+..
T Consensus 297 G~~-salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~ 375 (466)
T KOG2532|consen 297 GFL-SALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFN 375 (466)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccc
Confidence 444 4688999999999999999998663 22223333334433332 222 112222111111221111
Q ss_pred hhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHH
Q 021342 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (314)
Q Consensus 128 ~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (314)
..|.+.. ..++ .++.-+..+|+......++.+++|++.+.+.++. ....|+ .+|++..++.+++.
T Consensus 376 ---~~Gf~~~-~~~~--------apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~--t~~eW~-~VF~i~a~i~~~~~ 440 (466)
T KOG2532|consen 376 ---ISGFYKN-HQDI--------APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDN--TREEWR-IVFLIAAGILIVGN 440 (466)
T ss_pred ---hhhhHhh-hhhc--------cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCC--CHHHHH-HHHHHHHHHHHHhc
Confidence 0121221 1110 2456788899999999999999999988877532 123475 44666566666666
Q ss_pred HHHHhc
Q 021342 208 ILMCFL 213 (314)
Q Consensus 208 ~l~~~l 213 (314)
+++.+.
T Consensus 441 i~f~~f 446 (466)
T KOG2532|consen 441 IIFLFF 446 (466)
T ss_pred hheeEe
Confidence 555444
No 246
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.76 E-value=1.4 Score=42.22 Aligned_cols=21 Identities=19% Similarity=0.127 Sum_probs=15.8
Q ss_pred HHHHHHHHHhhhhHHHHHHHH
Q 021342 158 FNGEFWGMFASHQFVGNLITL 178 (314)
Q Consensus 158 ~~~~~~~~~~~g~~~G~li~~ 178 (314)
+.+.|.....+|..+|...+.
T Consensus 180 Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 180 ANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred cchhHHHHHHhcceeeeeccc
Confidence 788887777777777777665
No 247
>PTZ00207 hypothetical protein; Provisional
Probab=94.47 E-value=1.2 Score=44.43 Aligned_cols=115 Identities=11% Similarity=-0.062 Sum_probs=64.9
Q ss_pred cccchhhhhHHHHHHHHHH----HhhHhhhhhh-cCCCCh--hHHHHHHHHHHHHHHHhhHHHHHHhhchhh--------
Q 021342 26 YTRDVHILSCAFLLIFLAY----GAAQNLETTV-NTEGNL--GTISLGILYTSFTCFSLVASLVVRVLGSKN-------- 90 (314)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~----~~~~~l~~~i-~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~-------- 90 (314)
.+.+++++.+.+++...+- +...++.+.+ +.+.+. ...-.++..+..++|-+..|.+....-+|+
T Consensus 351 ~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt 430 (591)
T PTZ00207 351 KTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPIT 430 (591)
T ss_pred hchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchh
Confidence 4667777777766654432 2233444555 321111 111246666777777777777663222222
Q ss_pred -HHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhh
Q 021342 91 -ALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (314)
Q Consensus 91 -~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 140 (314)
.+.+..+....+.+..+.-....+++..++.|++.|..|+......++++
T Consensus 431 ~~l~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selF 481 (591)
T PTZ00207 431 IALFIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIF 481 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHh
Confidence 22223331111111121112268888999999999999999998898886
No 248
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.44 E-value=0.63 Score=44.62 Aligned_cols=130 Identities=9% Similarity=-0.008 Sum_probs=77.3
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHhh--hc---------hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhc
Q 021342 79 ASLVVRVLGSKNALILGTTGYWLFVAAN--LF---------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (314)
Q Consensus 79 ~~~l~~~~G~k~~l~~g~~~~~~~~~~~--~~---------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~ 147 (314)
......+..-|+++..+.+..++..+.. +. ++.+..+...++..+.....+......++++.
T Consensus 275 y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lc------- 347 (433)
T PF03092_consen 275 YRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLC------- 347 (433)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHC-------
Confidence 3344445566777777776665544432 11 11122223445666666666666666777776
Q ss_pred CCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCch--hHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGT--TLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 148 ~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
|+..-|...+++....++|..++..++..+.+..+....++. +.+.++..++.++.+.+..++|+.++
T Consensus 348 ---P~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 348 ---PKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 667889999999999999999999998888765541111122 22223333444445555556776444
No 249
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.33 E-value=0.83 Score=44.25 Aligned_cols=105 Identities=15% Similarity=0.178 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHhh-HHHHHHhhchhhHHHHHHHHHHHHHHhh-hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhh
Q 021342 66 GILYTSFTCFSLV-ASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (314)
Q Consensus 66 ~~~~~~~~~~~~~-~~~l~~~~G~k~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 143 (314)
+.......+++++ .+.+...+|-|++..+|++.-.+-...+ ++.+.+.++...++.++.. ...++..+.++.+.
T Consensus 284 ~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~-~~~pa~~s~~s~~v--- 359 (463)
T KOG2816|consen 284 SLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG-IVFPAIRAFASILV--- 359 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc-chhHHHHhHHHhhc---
Confidence 4555556667766 4578999999998888887765544443 6667777777766655544 44455555566554
Q ss_pred hhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHH
Q 021342 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (314)
Q Consensus 144 ~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~ 181 (314)
+++|+|+.+++...+..++..++|.+-+.+.
T Consensus 360 -------~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 360 -------SPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred -------ccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 5789999999999999999999988755554
No 250
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.11 E-value=1.3 Score=41.90 Aligned_cols=60 Identities=12% Similarity=0.205 Sum_probs=30.7
Q ss_pred HHHhhHHHHHHhhc--hhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 74 CFSLVASLVVRVLG--SKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 74 ~~~~~~~~l~~~~G--~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
+..+.+|...+|+. .|............. ...+.++.+.-+++-++.|++.|.. +.++++
T Consensus 74 ~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l-~va~~~~v~~~l~Gv~las~ssg~G---E~tfL~ 135 (402)
T PF02487_consen 74 LVKLIAPFFIHRVPYWIRILICVALSAAGML-LVAFSPSVWVRLLGVVLASLSSGLG---EVTFLS 135 (402)
T ss_pred HHHHHhHhhhhhccchHHHHHHHHHHHHHHh-heeeccchhHHHHHHHHHhhhhhhh---HHHHHH
Confidence 33456788888776 344333332222221 2224466665555666666666653 444444
No 251
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=93.92 E-value=2.2 Score=41.70 Aligned_cols=61 Identities=21% Similarity=0.165 Sum_probs=48.7
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHH-hhhhHHHHHHHHHH
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF-ASHQFVGNLITLAV 180 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~-~~g~~~G~li~~~i 180 (314)
+...++.+-++.++|+-...|...+.+++.+ |++-||+.+|.++... .+|..+++.++...
T Consensus 376 s~~wl~~~~~~~t~gEl~~sPvgls~~~~la----------P~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 376 SLPLMVLGLAVMGFAELFIDPVAMSQITRIE----------IPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHChHHHHHHHHhC----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566778889999999999999888888886 7799999999997643 56766666665544
No 252
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.51 E-value=4 Score=38.52 Aligned_cols=39 Identities=18% Similarity=0.285 Sum_probs=29.9
Q ss_pred CCCChhHHHHHHHHHHHHHHHh--hHHHHHH-----hhchhhHHHH
Q 021342 56 TEGNLGTISLGILYTSFTCFSL--VASLVVR-----VLGSKNALIL 94 (314)
Q Consensus 56 ~~~~~g~~~~~~~~~~~~~~~~--~~~~l~~-----~~G~k~~l~~ 94 (314)
...++.+.+.+++...+.-.++ .+.|++| ++|||++-+.
T Consensus 58 ~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 58 QAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred cCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceee
Confidence 3567778888888777776664 7899999 9999987543
No 253
>PF12832 MFS_1_like: MFS_1 like family
Probab=93.25 E-value=0.86 Score=32.44 Aligned_cols=66 Identities=14% Similarity=0.110 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHHHhhHhhhhhhcCCCChhHH----HHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHH
Q 021342 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTG 98 (314)
Q Consensus 33 l~~~~~~~~~~~~~~~~l~~~i~~~~~~g~~----~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~ 98 (314)
+....++.|.+........+....+.+.... ..++..+.-.+++++++.++||+|+++..+.....
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3444455555555444333222222233222 24566677778888999999999998887766543
No 254
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=92.04 E-value=1.1 Score=43.75 Aligned_cols=38 Identities=8% Similarity=-0.097 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhhHHHHHHh----hchhhHHHHHHHHHHHHH
Q 021342 66 GILYTSFTCFSLVASLVVRV----LGSKNALILGTTGYWLFV 103 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~~----~G~k~~l~~g~~~~~~~~ 103 (314)
....+.-.++.+++++++|| ..+|........++....
T Consensus 316 ~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g 357 (495)
T KOG2533|consen 316 TPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIG 357 (495)
T ss_pred chHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 34456666777889999999 778888888887776655
No 255
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.97 E-value=7.1 Score=37.76 Aligned_cols=82 Identities=17% Similarity=0.152 Sum_probs=54.6
Q ss_pred HHHhhchhhHHHHHHHHHHHHHHh-hh-ch-----------------hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhh
Q 021342 82 VVRVLGSKNALILGTTGYWLFVAA-NL-FP-----------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (314)
Q Consensus 82 l~~~~G~k~~l~~g~~~~~~~~~~-~~-~~-----------------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 142 (314)
=.+++|+++.+.++.....++.+. .. .| +...-++..++.|++-+..-+....++....
T Consensus 305 rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-- 382 (461)
T KOG3098|consen 305 RIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-- 382 (461)
T ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh--
Confidence 457899999999999877654443 22 11 3445566788999999877655566666553
Q ss_pred hhhhcCCCCccchhhHHHHHHHHHhhhhHHHH
Q 021342 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (314)
Q Consensus 143 ~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~ 174 (314)
+++|..+++++-.-...+..++-
T Consensus 383 ---------~~~~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 383 ---------PDDRAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred ---------cCchHHHHHHHHHHHHHHHHHHh
Confidence 46777887777655555554443
No 256
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.31 E-value=12 Score=37.35 Aligned_cols=136 Identities=13% Similarity=0.047 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHhhHHHHHH-hhchhhHHHHHHHHHHHHHHh--h---h---ch------------------hhhHHHHHH
Q 021342 66 GILYTSFTCFSLVASLVVR-VLGSKNALILGTTGYWLFVAA--N---L---FP------------------SWYTMVPAS 118 (314)
Q Consensus 66 ~~~~~~~~~~~~~~~~l~~-~~G~k~~l~~g~~~~~~~~~~--~---~---~~------------------~~~~l~~~r 118 (314)
..+...-...+++++.++| .+||-+++.++.+++.+.... . . .| ....++.+.
T Consensus 80 ~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l 159 (571)
T KOG1237|consen 80 NAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGAL 159 (571)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHH
Confidence 3333444455567888998 568999999988877543211 1 0 01 123556666
Q ss_pred HHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHH
Q 021342 119 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIV 198 (314)
Q Consensus 119 ~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~ 198 (314)
.+..+|.|..-+....+-+|-.++ .+-.....+...+..++...+.|..++..+--++-++ .+|. +-|.+
T Consensus 160 ~lia~G~gg~r~~~~~fGadQfd~----~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~-----~~w~-lgf~i 229 (571)
T KOG1237|consen 160 YLIALGAGGIRPCLLAFGADQFDE----LDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN-----VGWK-LGFGI 229 (571)
T ss_pred HHheeccCCCCCcchhhcccccCc----cCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhc-----ccce-eeccH
Confidence 677778877655554444444321 0001123344677777777777777777665555333 2463 33555
Q ss_pred HHHHHHHHHHHHH
Q 021342 199 FLGVITLGTILMC 211 (314)
Q Consensus 199 ~~~~~~~~~~l~~ 211 (314)
..+...+++++++
T Consensus 230 ~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 230 PTVLNALAILIFL 242 (571)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555555554
No 257
>PRK03612 spermidine synthase; Provisional
Probab=90.02 E-value=20 Score=35.35 Aligned_cols=110 Identities=14% Similarity=0.093 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHH---HHHHH----HHHHHhhhc-hhhhHHHHHHHHhhhhhhhhhccch
Q 021342 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALIL---GTTGY----WLFVAANLF-PSWYTMVPASLYLGFAASIIWVGEG 133 (314)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~---g~~~~----~~~~~~~~~-~~~~~l~~~r~l~G~g~~~~~~~~~ 133 (314)
...++++.+++++|+.+++.+.++.-++...+- +.++. .++....+. .....++..-++.|+..|.. .
T Consensus 53 ~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~----~ 128 (521)
T PRK03612 53 STVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGME----I 128 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
Confidence 345788889999999988877644444433221 11110 011110010 11111122223333333332 2
Q ss_pred hhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHc
Q 021342 134 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (314)
Q Consensus 134 ~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~ 182 (314)
.+++...++. ..++-|+..|..+++..+|.++|.++.+++.-
T Consensus 129 Pl~~~~~~~~-------~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 129 PLLMRILQRI-------RDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHhc-------cccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 3334333210 11245677888899999999999999777654
No 258
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=88.49 E-value=8.7 Score=37.32 Aligned_cols=59 Identities=15% Similarity=0.068 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHH
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~ 178 (314)
+.+.+++.-+++++|+=...+....+++..+ |++-.+..+++|......|+.++..++.
T Consensus 393 s~~~lil~y~l~s~gEL~iSpvGLs~~t~la----------P~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 393 SVWWLVLSYVLQSFGELFISPVGLSMVTKLA----------PPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred CHHHHHHHHHHHHHHHHHhCHHHHHHHHHhC----------hHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 5677888999999999988888887787775 6778888888887777777766666554
No 259
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=88.12 E-value=2.4 Score=40.73 Aligned_cols=82 Identities=17% Similarity=0.194 Sum_probs=63.1
Q ss_pred ChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHh-hhchhhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 59 NLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 59 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
+.|.+.+.+.....++.++..-.+++|+|-|+.+..+...|.+.+.. ...++.+....-+-..|+-.+...+.-.+.++
T Consensus 332 ~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~ 411 (498)
T KOG0637|consen 332 RMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALA 411 (498)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHH
Confidence 35778888888999999999999999999888888888777665544 36777777777888888777776666555555
Q ss_pred Hhh
Q 021342 138 AAA 140 (314)
Q Consensus 138 ~~~ 140 (314)
.+.
T Consensus 412 ~y~ 414 (498)
T KOG0637|consen 412 LYA 414 (498)
T ss_pred HHH
Confidence 543
No 260
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.93 E-value=8.3 Score=37.10 Aligned_cols=61 Identities=8% Similarity=0.017 Sum_probs=36.1
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHH
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i 180 (314)
+-+..++.-++.|+..|-..+....+ +... . +++||..+-.+...+..+|..+|..++..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~--------~p~~-v-~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCL--------APRQ-V-DPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHh--------cCCC-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556678888877543332221 2111 2 346777776666666778888888776554
No 261
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=87.56 E-value=4.2 Score=29.60 Aligned_cols=56 Identities=18% Similarity=0.003 Sum_probs=41.6
Q ss_pred hhhhcCCCChhHHHHHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhh
Q 021342 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN 106 (314)
Q Consensus 51 ~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~ 106 (314)
+++.+-+...+..-.+..|++|.+|.+....+.++..+++.+..+.+.-.+..+..
T Consensus 19 ~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 19 QADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 34434344445555789999999999999999999888888888887766655553
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=87.28 E-value=4 Score=39.16 Aligned_cols=180 Identities=13% Similarity=0.028 Sum_probs=95.1
Q ss_pred ccccchhhhhHHHHHHHHHHHhhHhhhh-hhcCC----CChhHHHHHHHHHHHHHHHhhHHHHHHhhch-hhHHHHHHHH
Q 021342 25 NYTRDVHILSCAFLLIFLAYGAAQNLET-TVNTE----GNLGTISLGILYTSFTCFSLVASLVVRVLGS-KNALILGTTG 98 (314)
Q Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~-~i~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~-k~~l~~g~~~ 98 (314)
.+-+|++++.++....+..|++...+.. .+..+ ...|... .+....-.+++.+++.+.||... |.++++....
T Consensus 263 ~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig-~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~ 341 (480)
T KOG2563|consen 263 FKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIG-ALMIVAGMLGALASGIIADKTKKFKLTTLVLYLF 341 (480)
T ss_pred HcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhH-HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Confidence 4667888888888888888877664444 33221 2335544 35555667788899999999885 6656555544
Q ss_pred HHHHHHh-h----hchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHH
Q 021342 99 YWLFVAA-N----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (314)
Q Consensus 99 ~~~~~~~-~----~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G 173 (314)
-.++... + .......++....+.|++.....+...-.-.|.. + |..|+. -.|.. ..+|++.|
T Consensus 342 ~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~T--------y-Pv~E~t-SsGll---~~~gq~f~ 408 (480)
T KOG2563|consen 342 ALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETT--------Y-PVAEGT-SSGLL---NLSGQIFG 408 (480)
T ss_pred HHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeec--------c-ccCCcc-cceeE---EeehhHHH
Confidence 3333222 1 1123345555666778887766665433333332 2 333332 22332 34555555
Q ss_pred HHHHHHHHcCCC-CCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 174 NLITLAVLKDDK-GGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 174 ~li~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
-++........+ ....+|....-+.+.....++..+..+++|.++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 409 VILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred HHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 555433322111 111233332233344555566666666666543
No 263
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=85.92 E-value=16 Score=35.13 Aligned_cols=144 Identities=17% Similarity=0.134 Sum_probs=81.8
Q ss_pred ccchhhhhHHHHHHHHHHHhhHhhhhhhcCCCChhHHHHHHHHHHHHH----HHhhHHHHHHhhchhhHHHHHHHHHH--
Q 021342 27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTC----FSLVASLVVRVLGSKNALILGTTGYW-- 100 (314)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~~~g~~~~~~~~~~~~~----~~~~~~~l~~~~G~k~~l~~g~~~~~-- 100 (314)
+..++..+++..+++....+..++...-..+.+.....+++.-..-++ +.+..|++.+|+|.-++=.++...-.
T Consensus 257 ~q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~ 336 (432)
T PF06963_consen 257 RQPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVC 336 (432)
T ss_pred hCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHH
Confidence 344666777777777665555544443333344444444444444333 33567889999999887777775432
Q ss_pred --HHHHhhhchh-h-hHHHHHHHHhhhhhh--hhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHH
Q 021342 101 --LFVAANLFPS-W-YTMVPASLYLGFAAS--IIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (314)
Q Consensus 101 --~~~~~~~~~~-~-~~l~~~r~l~G~g~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~ 174 (314)
+...+++.+. . ...-..-++.|+..+ .+|.-.-+. .+ ..++.-|++|||...|.-.+..++-..+-.
T Consensus 337 L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~-~q------i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 337 LALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAV-TQ------IMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred HHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHH-HH------hhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 2223333332 1 122223456677666 355443321 11 233444789999999998888777776665
Q ss_pred HHH
Q 021342 175 LIT 177 (314)
Q Consensus 175 li~ 177 (314)
++.
T Consensus 410 ~~~ 412 (432)
T PF06963_consen 410 VLT 412 (432)
T ss_pred HHH
Confidence 554
No 264
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=74.50 E-value=92 Score=30.67 Aligned_cols=30 Identities=13% Similarity=0.143 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHhhcChhHHHHHHHHHHHhH
Q 021342 234 YLVSLSKSITTLLADVRMLLIIPLFAYSGL 263 (314)
Q Consensus 234 ~~~~~~~~~~~~l~~~~~lll~p~~~~~g~ 263 (314)
+.++..+.+++.+|-|.+..+..+.+.+-+
T Consensus 263 ~i~~~Y~~l~~ilkLp~V~~li~ilL~~Ki 292 (544)
T PF13000_consen 263 SIKDVYKSLWKILKLPNVQTLIIILLTAKI 292 (544)
T ss_pred hHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 455666778888888888887766555443
No 265
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=72.20 E-value=16 Score=36.49 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=48.1
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
|...+++--++.|+++....+++.-+.=+= .|++-|+...++++....+|..++.++...+...
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~q----------aP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQ----------APESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhh----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456788999999999998876653222211 2789999999999998888888888877665543
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=70.05 E-value=1.1e+02 Score=29.52 Aligned_cols=32 Identities=6% Similarity=0.028 Sum_probs=22.3
Q ss_pred ccchhhHHHHHHHHHhhhhHHHHHHHHHHHcC
Q 021342 152 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (314)
Q Consensus 152 ~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~ 183 (314)
+..+.+.++..--.=...-++||++.+.+...
T Consensus 144 ~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~ 175 (432)
T PF06963_consen 144 PGALARMNATMRRIDLFCKLLAPLFVGLLMTF 175 (432)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 44555555555555567889999998888654
No 267
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=68.33 E-value=36 Score=31.96 Aligned_cols=124 Identities=20% Similarity=0.250 Sum_probs=73.4
Q ss_pred HHHHHhhchhhHHHHHHHHHH-HHHHhhhchhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhH
Q 021342 80 SLVVRVLGSKNALILGTTGYW-LFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSF 158 (314)
Q Consensus 80 ~~l~~~~G~k~~l~~g~~~~~-~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~ 158 (314)
=.+.|....||++++-.+.+. ++...-+.++...+=+.-++-|...+. .-+|-+.+.. . -+++++-+.
T Consensus 63 FlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa----EIAYysYIYs---~----Vd~~~Yqrv 131 (433)
T KOG3810|consen 63 FLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA----EIAYYSYIYS---K----VDPEMYKRV 131 (433)
T ss_pred HHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH----HHhhhheeee---e----cCHHHHHHH
Confidence 357899999999988766554 344444556665554456677766553 3334444331 1 245677777
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 021342 159 NGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (314)
Q Consensus 159 ~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 218 (314)
.|.--++.-.|-..|..++-.+..-.. .+....-+ +..+...++.++.+++|.+++
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~~---~sy~~LN~-ISL~~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLET---LSYTTLNY-ISLAEVTIAVLLALFLPRVKR 187 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhcc---cchhhhch-hhHHHHHHHHHHHhhCCCCch
Confidence 777777776777777666655543211 11222222 334555667788889988763
No 268
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=62.99 E-value=72 Score=29.52 Aligned_cols=22 Identities=9% Similarity=-0.129 Sum_probs=12.0
Q ss_pred HHHHHHHHHHhHHHhhhhcccc
Q 021342 252 LLIIPLFAYSGLQQAFVWAEFT 273 (314)
Q Consensus 252 lll~p~~~~~g~~~~f~~~~~~ 273 (314)
..+.|.....-.++-...|..+
T Consensus 251 ~~MvPL~~VY~~EY~INQGl~e 272 (409)
T KOG3880|consen 251 KYMVPLALVYFAEYFINQGLAE 272 (409)
T ss_pred HHHHHHHHHHHHHHHHhhhhHh
Confidence 3566776655455555555443
No 269
>PF10329 DUF2417: Region of unknown function (DUF2417); InterPro: IPR019431 This entry represents a family of fungal proteins with no known function. In some cases these proteins also contain an alpha/beta hydrolase fold (IPR000073 from INTERPRO).
Probab=61.24 E-value=41 Score=29.37 Aligned_cols=8 Identities=50% Similarity=0.958 Sum_probs=6.2
Q ss_pred CCCCCccc
Q 021342 8 DEEAPLVA 15 (314)
Q Consensus 8 ~~~~~l~~ 15 (314)
||++||+.
T Consensus 1 dEr~~LLp 8 (232)
T PF10329_consen 1 DERTPLLP 8 (232)
T ss_pred CCcccCCC
Confidence 68888885
No 270
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=59.84 E-value=28 Score=33.94 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=27.6
Q ss_pred CccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCC
Q 021342 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (314)
Q Consensus 151 ~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~ 184 (314)
.|.+.+...+.+......+..+||++...+....
T Consensus 418 gp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~ 451 (488)
T KOG2325|consen 418 GPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS 451 (488)
T ss_pred CCccccceeEEEEeccchhhhhhHHHHhhhHHhc
Confidence 4577888888888888999999999987776654
No 271
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=52.23 E-value=39 Score=27.48 Aligned_cols=72 Identities=21% Similarity=0.237 Sum_probs=40.1
Q ss_pred HHHHhhchhhHHHHHH---HHHHHHHHhhh--------chhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCC
Q 021342 81 LVVRVLGSKNALILGT---TGYWLFVAANL--------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (314)
Q Consensus 81 ~l~~~~G~k~~l~~g~---~~~~~~~~~~~--------~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~ 149 (314)
.++||.-||..+..|. ++.+.+.+.++ .|++..++..-++.|+|.-.+ .+.+++.-+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGi---sYGilSaSW--------- 123 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGI---SYGILSASW--------- 123 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhh---hhhhccccc---------
Confidence 4677777777776655 22333333331 257777776666666665433 344444444
Q ss_pred CCccchhhHHHHHHHH
Q 021342 150 HEGTVIGSFNGEFWGM 165 (314)
Q Consensus 150 ~~~~~rg~~~~~~~~~ 165 (314)
++++-|...|+=-.-
T Consensus 124 -D~~r~GSllG~~e~~ 138 (153)
T PF11947_consen 124 -DPEREGSLLGWEEFK 138 (153)
T ss_pred -CCCCCCCcccHHHHH
Confidence 556677766654333
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=48.92 E-value=1.6e+02 Score=26.27 Aligned_cols=102 Identities=17% Similarity=0.205 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhhHHHHHH-hhchhhHHH----HHHHHHHHHHHh--hhch----hhhHHHHHHHHhhhhhhhhhccchhh
Q 021342 67 ILYTSFTCFSLVASLVVR-VLGSKNALI----LGTTGYWLFVAA--NLFP----SWYTMVPASLYLGFAASIIWVGEGTY 135 (314)
Q Consensus 67 ~~~~~~~~~~~~~~~l~~-~~G~k~~l~----~g~~~~~~~~~~--~~~~----~~~~l~~~r~l~G~g~~~~~~~~~~~ 135 (314)
++..++.+|.+..|+..+ .+-||+-+. .+.+.+.+.++. ...+ ....+++..++.|+. .|..|+.+
T Consensus 149 ~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f---~WgiQ~Vi 225 (267)
T PF07672_consen 149 LFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFF---LWGIQGVI 225 (267)
T ss_pred HHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHH---HHhhhHHH
Confidence 334455566665566555 444555443 223333332222 1211 345566666666665 48888876
Q ss_pred HhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHH
Q 021342 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (314)
Q Consensus 136 i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li 176 (314)
+.- .. +.++. +|++.|..+|+.|.......-+..++
T Consensus 226 L~l-Ph---EyK~~-~pk~ig~~Fg~iWGfGY~~yTi~~Ii 261 (267)
T PF07672_consen 226 LNL-PH---EYKGY-NPKKIGIQFGLIWGFGYIFYTIYDII 261 (267)
T ss_pred hcC-hh---hhcCC-CcceehhHHHHHHHHHHHHHHHHHHH
Confidence 652 21 11222 45778888888776555544444433
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=46.71 E-value=64 Score=30.72 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=27.4
Q ss_pred hhhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHH
Q 021342 109 PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (314)
Q Consensus 109 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~ 177 (314)
.+-+.++..-.+.|+.-|=+ +.+.--++..+. +++|+..+-.+-......|...|.+++
T Consensus 341 ~~~~~~~~l~~~lglsnGYl--------tsl~m~~aPk~v--~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYL--------TSLIMMYAPKQV--KPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred cCchHHHHHHHHHHhccchH--------hhheehhcCCCC--ChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 34444445566778876643 333222232221 334444433333333455556665554
No 274
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=40.36 E-value=16 Score=28.67 Aligned_cols=21 Identities=24% Similarity=0.279 Sum_probs=9.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 021342 192 TTLLFIVFLGVITLGTILMCF 212 (314)
Q Consensus 192 ~~~~~~~~~~~~~~~~~l~~~ 212 (314)
||.+|++++++.++.++++++
T Consensus 1 RW~l~~iii~~i~l~~~~~~~ 21 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLFYC 21 (130)
T ss_pred CeeeHHHHHHHHHHHHHHHHH
Confidence 355555544444443333333
No 275
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=33.64 E-value=44 Score=29.79 Aligned_cols=12 Identities=17% Similarity=0.135 Sum_probs=6.4
Q ss_pred HHhhhhHHHHHH
Q 021342 165 MFASHQFVGNLI 176 (314)
Q Consensus 165 ~~~~g~~~G~li 176 (314)
.+.+|.++.++.
T Consensus 14 gf~iG~ii~~ip 25 (267)
T PF07672_consen 14 GFNIGTIIVNIP 25 (267)
T ss_pred cchhhHHHHHhh
Confidence 455666555443
No 276
>PF12832 MFS_1_like: MFS_1 like family
Probab=33.17 E-value=1.7e+02 Score=20.45 Aligned_cols=46 Identities=11% Similarity=-0.102 Sum_probs=34.2
Q ss_pred hhhhccccccccccccccchhhHHHHHHhhHhHHHHHHHHHHHHhhc
Q 021342 266 AFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIFLVELLLRWLYFS 312 (314)
Q Consensus 266 ~f~~~~~~~~~~~~~lg~~~ig~~~~~~G~~~~i~~~~~l~~~~~~~ 312 (314)
+-.+..+|.+..+..++..++|.++++-=++..+++. +.+++.|-+
T Consensus 17 g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~p-l~g~laDk~ 62 (77)
T PF12832_consen 17 GCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPP-LWGFLADKF 62 (77)
T ss_pred HHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 4445566666667788999999999999888888776 566655543
No 277
>PRK14761 ryhB-regulated fur leader peptide; Provisional
Probab=32.66 E-value=16 Score=19.59 Aligned_cols=16 Identities=38% Similarity=0.407 Sum_probs=12.9
Q ss_pred CcCCCCCCCCCcccCC
Q 021342 2 ESVDSRDEEAPLVADS 17 (314)
Q Consensus 2 ~~~~~~~~~~~l~~~~ 17 (314)
.||++++|-.+|+..+
T Consensus 9 nsvtssnevnrlvtgq 24 (28)
T PRK14761 9 NSVTSSNEVNRLVTGQ 24 (28)
T ss_pred ccccchhhhhhhhccc
Confidence 5899999988888743
No 278
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=32.30 E-value=13 Score=33.72 Aligned_cols=60 Identities=12% Similarity=0.086 Sum_probs=1.0
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHH
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~ 179 (314)
|.+..++.-++.|+.-|-+-+....+..+. . +++||..+-.+...+...|..+|.+++..
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~---------v-~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKS---------V-SPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --------------------HHHH----------------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCc---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455677777664422222222111 1 34666655555555566777777766543
No 279
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=31.51 E-value=1.3e+02 Score=30.33 Aligned_cols=28 Identities=11% Similarity=0.076 Sum_probs=20.1
Q ss_pred HHHHHHhhHHHHHHhhc--hhhHHHHHHHH
Q 021342 71 SFTCFSLVASLVVRVLG--SKNALILGTTG 98 (314)
Q Consensus 71 ~~~~~~~~~~~l~~~~G--~k~~l~~g~~~ 98 (314)
...++.+++|.++||++ .|+.+.++.+.
T Consensus 379 ~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 379 AAGLGYLIGGFIMKKFKLNVKKAAYFAICL 408 (633)
T ss_pred HHHHHHhhhhheeeeecccHHHHHHHHHHH
Confidence 45678889999999998 45555555543
No 280
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=30.82 E-value=2.3e+02 Score=28.86 Aligned_cols=80 Identities=11% Similarity=0.073 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHhHhhhhhhhhcCCCCccchhhHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCCC
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGST 189 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~G~li~~~i~~~~~~~~~ 189 (314)
+.+.+++--++.|+|+....+...-+.-+- .|++.|....+++.+...+|..+..++. .... .
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~----------~p~~mks~~~a~~~~~~~~g~~~~~~~~----~~~~---~ 626 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQ----------APPNMKSVLQALWLLTVAIGNLIVVVIA----EFEN---F 626 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHh----------CcHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhhc---C
Confidence 455666777888888887654433222211 2667787777776665555555544443 2211 1
Q ss_pred CchhHHHHHHHHHHHHH
Q 021342 190 SGTTLLFIVFLGVITLG 206 (314)
Q Consensus 190 ~~~~~~~~~~~~~~~~~ 206 (314)
.+.+..|..++.+.++-
T Consensus 627 ~~~~~~~~~~~~~~~~~ 643 (654)
T TIGR00926 627 SVQAAEFFLFASLMLVV 643 (654)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 24455566665555443
No 281
>PRK10263 DNA translocase FtsK; Provisional
Probab=29.94 E-value=4.3e+02 Score=29.37 Aligned_cols=19 Identities=16% Similarity=0.256 Sum_probs=9.7
Q ss_pred hHHHHHHHHHHHHHHHhhH
Q 021342 61 GTISLGILYTSFTCFSLVA 79 (314)
Q Consensus 61 g~~~~~~~~~~~~~~~~~~ 79 (314)
|.+...+++..++++.++.
T Consensus 68 GA~LAD~L~~LFGl~AYLL 86 (1355)
T PRK10263 68 GAWLADTLFFIFGVMAYTI 86 (1355)
T ss_pred HHHHHHHHHHHHhHHHHHH
Confidence 4444445555555555543
No 282
>COG4769 Predicted membrane protein [Function unknown]
Probab=29.82 E-value=1.3e+02 Score=24.75 Aligned_cols=55 Identities=15% Similarity=0.071 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHhhchhhHHHHHHHHHHHHHHhhhchhhhHHHHHHHHhhhh
Q 021342 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFA 124 (314)
Q Consensus 65 ~~~~~~~~~~~~~~~~~l~~~~G~k~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 124 (314)
..++...-++.+...-++..++|+|..-++|. ...+.+.+|..+++++|++.|=.
T Consensus 79 ~Fl~sfaG~i~S~L~m~~l~~f~~k~~S~lgi-----S~mGaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 79 VFLYSFAGAILSTLFMYFLYQFGPKYLSLLGI-----SVMGAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCceEeeeeh-----hhHHHHHHhHHHHHHHHHHHhcc
Confidence 33444555566667778999999998744443 22345668888998888886543
No 283
>CHL00031 psbT photosystem II protein T
Probab=28.75 E-value=1.2e+02 Score=17.71 Aligned_cols=20 Identities=35% Similarity=0.418 Sum_probs=10.6
Q ss_pred HHHHHHHHH-HHhccCCcccc
Q 021342 201 GVITLGTIL-MCFLRKEEDKG 220 (314)
Q Consensus 201 ~~~~~~~~l-~~~l~~~~~~~ 220 (314)
..+.++++. ..+.+||++..
T Consensus 10 l~~tlgilFFAI~FRePPri~ 30 (33)
T CHL00031 10 LVSTLGIIFFAIFFREPPKVP 30 (33)
T ss_pred HHHHHHHHHHhheecCCCCCC
Confidence 333444443 35678876543
No 284
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=25.62 E-value=4e+02 Score=27.49 Aligned_cols=24 Identities=8% Similarity=-0.058 Sum_probs=15.8
Q ss_pred cccCccccccchhhhhHHHHHHHH
Q 021342 19 QVLTPKNYTRDVHILSCAFLLIFL 42 (314)
Q Consensus 19 ~p~n~~~~~~~~~~l~~~~~~~~~ 42 (314)
.|-+++.+.|++++..++|++...
T Consensus 49 ~d~~~~~R~~~l~~t~~~f~i~sl 72 (704)
T TIGR01666 49 LDDRLTGRLKNVIFTLICFSIASF 72 (704)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHH
Confidence 334777888888876666654433
No 285
>PF05972 APC_15aa: APC 15 residue motif; InterPro: IPR009240 The 15 aa repeat is found in the APC protein family. It is involved in binding beta-catenin [] along with the IPR009223 from INTERPRO repeats. Many human cancer mutations map to the region around these motifs, and may be involved in disrupting their binding of beta-catenin.; GO: 0008013 beta-catenin binding, 0016055 Wnt receptor signaling pathway; PDB: 1JPP_C.
Probab=23.29 E-value=36 Score=16.41 Aligned_cols=11 Identities=9% Similarity=-0.303 Sum_probs=3.1
Q ss_pred CccccCccccc
Q 021342 17 SLQVLTPKNYT 27 (314)
Q Consensus 17 ~~~p~n~~~~~ 27 (314)
.|+|.|++.++
T Consensus 2 ~dqP~dyS~kY 12 (16)
T PF05972_consen 2 EDQPIDYSLKY 12 (16)
T ss_dssp ------CCCCT
T ss_pred Cccccchhhhc
Confidence 46788887554
No 286
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=22.46 E-value=6.9e+02 Score=23.94 Aligned_cols=28 Identities=4% Similarity=-0.062 Sum_probs=17.2
Q ss_pred hhhHHHHHHHHhhhhhhhhhccchhhHh
Q 021342 110 SWYTMVPASLYLGFAASIIWVGEGTYLT 137 (314)
Q Consensus 110 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 137 (314)
.+...+..-++.|++.+..-.+..++.+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 3455556667888888877444444443
No 287
>PF15366 DUF4597: Domain of unknown function (DUF4597)
Probab=21.77 E-value=67 Score=21.12 Aligned_cols=15 Identities=33% Similarity=0.574 Sum_probs=11.5
Q ss_pred CCCCCCCCCcccCCc
Q 021342 4 VDSRDEEAPLVADSL 18 (314)
Q Consensus 4 ~~~~~~~~~l~~~~~ 18 (314)
-.++.|+.|.++|.+
T Consensus 5 s~sshdeaPVL~dKh 19 (62)
T PF15366_consen 5 SSSSHDEAPVLSDKH 19 (62)
T ss_pred cCCcccccccccccc
Confidence 357888999999544
No 288
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=21.40 E-value=4.9e+02 Score=21.77 Aligned_cols=67 Identities=12% Similarity=0.045 Sum_probs=37.3
Q ss_pred cccchhhhhHHHHHHHHHHHhhHhhhhhhcCCCChhHHHHHHHHHHHHHHHhhHHH----HHHhhchhhHHHHHHHHHHH
Q 021342 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASL----VVRVLGSKNALILGTTGYWL 101 (314)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~----l~~~~G~k~~l~~g~~~~~~ 101 (314)
+.||++..++...+++..+.....+ ..+. . . . .....-++..++.|+ +..|.+++.++.+-.+...+
T Consensus 2 ~~KDlI~igiftaiyfvi~~v~~~l-~~~~--~---~--~-~~~~~p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl 72 (189)
T TIGR02185 2 KIKDFIFIGLLTAIYFAIQFIVGML-TMTT--G---F--F-AHLFSPGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGL 72 (189)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHH-Hhcc--h---H--H-HHHHHHHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHH
Confidence 4577777777666555543322211 1110 0 0 1 123444555555544 68899999998887777654
Done!