Query 021344
Match_columns 314
No_of_seqs 332 out of 3155
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 16:17:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p91_A Ribosomal RNA large sub 99.9 5.8E-21 2E-25 168.3 13.7 177 61-277 3-181 (269)
2 4hg2_A Methyltransferase type 99.8 1.7E-20 5.8E-25 164.5 12.5 128 151-293 26-153 (257)
3 1vl5_A Unknown conserved prote 99.8 3.1E-20 1E-24 162.9 13.1 118 155-277 26-143 (260)
4 2o57_A Putative sarcosine dime 99.8 1.2E-19 4.2E-24 162.1 16.2 122 154-278 66-191 (297)
5 4gek_A TRNA (CMO5U34)-methyltr 99.8 7.9E-20 2.7E-24 160.6 14.6 125 149-277 51-181 (261)
6 4e2x_A TCAB9; kijanose, tetron 99.8 9.5E-21 3.3E-25 177.4 8.0 116 154-276 95-210 (416)
7 3bus_A REBM, methyltransferase 99.8 3.2E-19 1.1E-23 157.3 16.7 122 154-278 49-170 (273)
8 1nkv_A Hypothetical protein YJ 99.8 1.9E-19 6.5E-24 157.2 14.3 125 149-277 19-143 (256)
9 1xxl_A YCGJ protein; structura 99.8 6.2E-19 2.1E-23 152.8 16.4 117 156-277 11-127 (239)
10 3dlc_A Putative S-adenosyl-L-m 99.8 3.8E-19 1.3E-23 151.1 13.9 120 153-276 31-150 (219)
11 3jwh_A HEN1; methyltransferase 99.8 3.8E-19 1.3E-23 151.7 13.7 122 154-275 17-142 (217)
12 3kkz_A Uncharacterized protein 99.8 7E-19 2.4E-23 154.8 15.3 125 149-277 28-153 (267)
13 3f4k_A Putative methyltransfer 99.8 8.2E-19 2.8E-23 153.2 15.4 125 149-277 28-153 (257)
14 3dh0_A SAM dependent methyltra 99.8 3.8E-19 1.3E-23 151.6 12.6 119 157-278 28-147 (219)
15 1pjz_A Thiopurine S-methyltran 99.8 2.1E-19 7E-24 152.1 10.8 115 159-275 15-141 (203)
16 3jwg_A HEN1, methyltransferase 99.8 5.1E-19 1.7E-23 151.0 13.3 123 154-276 17-143 (219)
17 3mgg_A Methyltransferase; NYSG 99.8 6.6E-19 2.2E-23 155.6 12.7 119 156-277 27-145 (276)
18 3ujc_A Phosphoethanolamine N-m 99.8 5E-19 1.7E-23 155.1 10.7 124 149-278 38-163 (266)
19 3g5t_A Trans-aconitate 3-methy 99.8 2.5E-18 8.7E-23 153.8 15.1 123 151-277 22-152 (299)
20 2p7i_A Hypothetical protein; p 99.8 2.8E-18 9.6E-23 148.5 14.9 103 165-277 41-144 (250)
21 3vc1_A Geranyl diphosphate 2-C 99.8 1.9E-18 6.6E-23 155.6 14.3 120 156-279 106-226 (312)
22 3g5l_A Putative S-adenosylmeth 99.8 1E-18 3.5E-23 152.4 12.0 114 156-276 34-147 (253)
23 3dtn_A Putative methyltransfer 99.8 1.9E-18 6.5E-23 148.9 13.3 121 152-278 29-152 (234)
24 3ofk_A Nodulation protein S; N 99.8 1.3E-18 4.3E-23 148.1 11.7 114 156-277 41-157 (216)
25 4htf_A S-adenosylmethionine-de 99.8 1.7E-18 6E-23 153.7 12.8 107 167-277 69-176 (285)
26 2gb4_A Thiopurine S-methyltran 99.8 2.3E-18 7.7E-23 150.6 12.8 120 155-276 57-193 (252)
27 3ege_A Putative methyltransfer 99.8 1.7E-18 5.8E-23 152.0 11.9 115 153-279 21-135 (261)
28 3hem_A Cyclopropane-fatty-acyl 99.8 4.7E-18 1.6E-22 152.3 14.5 118 155-278 61-187 (302)
29 3l8d_A Methyltransferase; stru 99.8 2.2E-18 7.4E-23 149.1 11.9 114 154-277 43-156 (242)
30 2p35_A Trans-aconitate 2-methy 99.8 2.8E-18 9.4E-23 149.9 12.1 113 156-277 23-135 (259)
31 3gu3_A Methyltransferase; alph 99.8 4.8E-18 1.6E-22 151.0 13.5 115 157-276 12-128 (284)
32 3hnr_A Probable methyltransfer 99.8 3E-18 1E-22 146.2 11.6 111 157-277 36-148 (220)
33 2yqz_A Hypothetical protein TT 99.8 4.8E-18 1.6E-22 148.7 13.2 105 163-273 36-140 (263)
34 2xvm_A Tellurite resistance pr 99.8 7.2E-18 2.5E-22 141.2 13.3 115 157-277 23-139 (199)
35 3h2b_A SAM-dependent methyltra 99.8 2.1E-18 7E-23 145.4 9.9 102 167-278 42-145 (203)
36 1kpg_A CFA synthase;, cyclopro 99.8 9.7E-18 3.3E-22 149.0 14.5 118 155-278 53-172 (287)
37 2gs9_A Hypothetical protein TT 99.8 7.2E-18 2.5E-22 142.9 12.7 100 166-277 36-135 (211)
38 3lcc_A Putative methyl chlorid 99.8 5E-18 1.7E-22 146.5 11.8 107 167-278 67-175 (235)
39 3thr_A Glycine N-methyltransfe 99.7 5.5E-18 1.9E-22 151.0 11.4 124 151-276 42-177 (293)
40 3ccf_A Cyclopropane-fatty-acyl 99.7 3.4E-18 1.2E-22 151.4 10.0 110 157-277 48-157 (279)
41 3sm3_A SAM-dependent methyltra 99.7 1.1E-17 3.8E-22 143.6 12.8 111 166-278 30-145 (235)
42 3bkw_A MLL3908 protein, S-aden 99.7 8.6E-18 2.9E-22 145.3 11.6 113 157-276 34-146 (243)
43 2p8j_A S-adenosylmethionine-de 99.7 9.6E-18 3.3E-22 141.7 11.6 109 164-278 21-132 (209)
44 3ou2_A SAM-dependent methyltra 99.7 1.4E-17 4.9E-22 141.4 12.2 111 157-277 36-149 (218)
45 3fpf_A Mtnas, putative unchara 99.7 2.5E-17 8.5E-22 145.7 13.8 140 129-276 74-224 (298)
46 2fk8_A Methoxy mycolic acid sy 99.7 2.5E-17 8.4E-22 148.6 14.0 117 155-278 79-198 (318)
47 3i9f_A Putative type 11 methyl 99.7 4.3E-18 1.5E-22 139.4 8.0 107 159-278 10-116 (170)
48 1xtp_A LMAJ004091AAA; SGPP, st 99.7 6.9E-18 2.4E-22 147.0 9.6 114 157-276 84-199 (254)
49 3bkx_A SAM-dependent methyltra 99.7 4.1E-17 1.4E-21 143.8 14.5 122 156-279 33-164 (275)
50 1ve3_A Hypothetical protein PH 99.7 1.8E-17 6.3E-22 141.7 11.7 112 157-276 31-144 (227)
51 3e05_A Precorrin-6Y C5,15-meth 99.7 1.3E-16 4.3E-21 134.7 16.6 121 150-276 24-144 (204)
52 2ex4_A Adrenal gland protein A 99.7 1.3E-17 4.6E-22 144.4 10.5 108 166-277 79-188 (241)
53 2pxx_A Uncharacterized protein 99.7 2.3E-17 7.9E-22 139.7 11.5 116 154-277 32-162 (215)
54 4fsd_A Arsenic methyltransfera 99.7 2.2E-17 7.5E-22 153.0 12.3 115 164-278 81-207 (383)
55 1y8c_A S-adenosylmethionine-de 99.7 1.6E-17 5.5E-22 143.6 10.2 116 154-276 23-144 (246)
56 3dli_A Methyltransferase; PSI- 99.7 1.1E-17 3.7E-22 144.9 9.0 111 154-277 28-143 (240)
57 2aot_A HMT, histamine N-methyl 99.7 1.2E-17 4.2E-22 149.0 9.5 110 165-276 51-174 (292)
58 3ocj_A Putative exported prote 99.7 2.1E-17 7.1E-22 148.4 10.8 112 164-278 116-231 (305)
59 3m70_A Tellurite resistance pr 99.7 3.9E-17 1.3E-21 145.0 12.3 111 160-277 114-226 (286)
60 2kw5_A SLR1183 protein; struct 99.7 1.2E-17 4.2E-22 140.5 7.4 104 166-278 30-135 (202)
61 3pfg_A N-methyltransferase; N, 99.7 6.1E-17 2.1E-21 142.0 11.9 100 166-276 50-153 (263)
62 3hm2_A Precorrin-6Y C5,15-meth 99.7 8.2E-17 2.8E-21 132.4 11.8 117 153-276 12-129 (178)
63 3e23_A Uncharacterized protein 99.7 3.8E-17 1.3E-21 138.5 9.2 101 166-278 43-145 (211)
64 3p9n_A Possible methyltransfer 99.7 1.1E-16 3.9E-21 133.4 11.2 122 153-278 28-157 (189)
65 3htx_A HEN1; HEN1, small RNA m 99.7 1.9E-16 6.4E-21 155.3 14.4 124 153-277 708-837 (950)
66 3g07_A 7SK snRNA methylphospha 99.7 3.6E-17 1.2E-21 146.0 8.7 109 166-274 46-220 (292)
67 3njr_A Precorrin-6Y methylase; 99.7 6.7E-16 2.3E-20 130.6 16.0 116 152-276 41-156 (204)
68 2avn_A Ubiquinone/menaquinone 99.7 1.2E-16 4.1E-21 140.0 11.8 109 156-277 46-155 (260)
69 1ri5_A MRNA capping enzyme; me 99.7 1.4E-16 4.6E-21 141.9 11.7 109 165-276 63-176 (298)
70 3gwz_A MMCR; methyltransferase 99.7 9.3E-16 3.2E-20 141.3 17.7 120 156-280 192-313 (369)
71 2qe6_A Uncharacterized protein 99.7 3.9E-16 1.3E-20 138.0 14.5 116 157-277 67-199 (274)
72 2vdw_A Vaccinia virus capping 99.7 8.2E-17 2.8E-21 144.3 10.1 111 166-277 48-172 (302)
73 3g2m_A PCZA361.24; SAM-depende 99.7 1.1E-16 3.8E-21 143.1 10.9 123 152-278 69-194 (299)
74 3cc8_A Putative methyltransfer 99.7 1.4E-16 4.7E-21 136.2 10.9 107 157-276 24-132 (230)
75 3orh_A Guanidinoacetate N-meth 99.7 2.9E-17 1E-21 142.1 6.8 105 165-274 59-170 (236)
76 1zx0_A Guanidinoacetate N-meth 99.7 4.5E-17 1.5E-21 140.7 6.9 107 165-276 59-172 (236)
77 3lbf_A Protein-L-isoaspartate 99.7 4.4E-16 1.5E-20 131.8 12.7 114 152-276 63-176 (210)
78 1dus_A MJ0882; hypothetical pr 99.7 5.2E-16 1.8E-20 128.9 12.8 119 153-277 39-160 (194)
79 3d2l_A SAM-dependent methyltra 99.7 2.8E-16 9.7E-21 135.7 11.3 113 154-276 23-139 (243)
80 3ggd_A SAM-dependent methyltra 99.7 1E-16 3.5E-21 139.0 8.4 105 165-277 55-166 (245)
81 2a14_A Indolethylamine N-methy 99.7 7.6E-17 2.6E-21 141.7 7.2 113 163-276 52-199 (263)
82 1yzh_A TRNA (guanine-N(7)-)-me 99.7 8.6E-16 2.9E-20 130.6 13.4 106 166-274 41-156 (214)
83 3i53_A O-methyltransferase; CO 99.7 4.4E-16 1.5E-20 141.4 12.2 112 163-279 166-279 (332)
84 1wzn_A SAM-dependent methyltra 99.7 7.5E-16 2.6E-20 134.0 13.2 108 162-276 37-147 (252)
85 3bxo_A N,N-dimethyltransferase 99.7 3.5E-16 1.2E-20 134.8 10.9 103 165-278 39-145 (239)
86 1vlm_A SAM-dependent methyltra 99.7 3.3E-16 1.1E-20 133.6 10.7 95 167-277 48-142 (219)
87 1x19_A CRTF-related protein; m 99.7 1.5E-15 5.1E-20 139.4 15.7 120 155-279 179-300 (359)
88 3dp7_A SAM-dependent methyltra 99.7 9.5E-16 3.2E-20 141.0 14.2 110 165-278 178-291 (363)
89 2r3s_A Uncharacterized protein 99.7 1.3E-15 4.4E-20 138.2 14.9 120 155-278 152-275 (335)
90 3mti_A RRNA methylase; SAM-dep 99.7 3.9E-16 1.4E-20 129.5 10.5 109 165-278 21-139 (185)
91 3e8s_A Putative SAM dependent 99.7 2E-16 6.9E-21 134.9 9.0 110 156-277 42-155 (227)
92 1qzz_A RDMB, aclacinomycin-10- 99.7 1.2E-15 4.3E-20 140.5 14.9 115 156-275 172-288 (374)
93 2fca_A TRNA (guanine-N(7)-)-me 99.6 5.2E-16 1.8E-20 132.1 10.5 106 166-274 38-153 (213)
94 3cgg_A SAM-dependent methyltra 99.6 9.9E-16 3.4E-20 127.4 11.9 103 165-277 45-150 (195)
95 3mcz_A O-methyltransferase; ad 99.6 1.2E-15 4.2E-20 139.4 13.6 120 157-279 169-292 (352)
96 3dxy_A TRNA (guanine-N(7)-)-me 99.6 2.3E-16 8E-21 134.8 8.1 106 166-274 34-150 (218)
97 2ip2_A Probable phenazine-spec 99.6 1.5E-15 5.1E-20 137.9 13.5 119 155-279 157-277 (334)
98 3uwp_A Histone-lysine N-methyl 99.6 6.5E-16 2.2E-20 141.7 10.8 124 153-278 160-292 (438)
99 2g72_A Phenylethanolamine N-me 99.6 2.4E-16 8E-21 140.3 7.4 119 156-275 59-216 (289)
100 3iv6_A Putative Zn-dependent a 99.6 1.1E-15 3.7E-20 133.7 11.4 110 154-275 33-149 (261)
101 3bgv_A MRNA CAP guanine-N7 met 99.6 9.6E-16 3.3E-20 137.9 11.4 110 166-276 34-157 (313)
102 3ckk_A TRNA (guanine-N(7)-)-me 99.6 9.8E-16 3.4E-20 132.4 10.9 111 165-275 45-169 (235)
103 3fzg_A 16S rRNA methylase; met 99.6 2.3E-16 7.8E-21 129.9 6.3 118 150-274 35-152 (200)
104 2fyt_A Protein arginine N-meth 99.6 1.6E-15 5.6E-20 138.1 12.6 112 156-271 54-168 (340)
105 1xdz_A Methyltransferase GIDB; 99.6 1.3E-15 4.4E-20 131.9 11.2 103 165-274 69-174 (240)
106 3mq2_A 16S rRNA methyltransfer 99.6 6E-16 2E-20 131.8 8.8 110 161-274 22-140 (218)
107 3mb5_A SAM-dependent methyltra 99.6 2.9E-15 1E-19 130.6 13.3 119 150-276 77-196 (255)
108 2pwy_A TRNA (adenine-N(1)-)-me 99.6 3.8E-15 1.3E-19 129.9 14.0 119 150-276 80-200 (258)
109 1tw3_A COMT, carminomycin 4-O- 99.6 4.1E-15 1.4E-19 136.4 14.6 115 157-276 174-290 (360)
110 1yb2_A Hypothetical protein TA 99.6 1.6E-15 5.6E-20 134.0 11.4 112 156-276 100-213 (275)
111 1fbn_A MJ fibrillarin homologu 99.6 2.1E-15 7.1E-20 129.8 11.5 102 161-273 69-177 (230)
112 3eey_A Putative rRNA methylase 99.6 1.4E-15 4.7E-20 127.4 10.1 114 163-278 19-143 (197)
113 2ift_A Putative methylase HI07 99.6 8E-16 2.7E-20 129.8 8.4 121 154-278 40-167 (201)
114 2i62_A Nicotinamide N-methyltr 99.6 3.7E-16 1.3E-20 136.7 6.5 111 165-276 55-200 (265)
115 3lst_A CALO1 methyltransferase 99.6 2.3E-15 7.7E-20 137.6 11.9 119 157-283 175-295 (348)
116 3q7e_A Protein arginine N-meth 99.6 2.3E-15 8E-20 137.6 11.6 108 163-274 63-173 (349)
117 1dl5_A Protein-L-isoaspartate 99.6 3E-15 1E-19 135.1 12.0 114 153-275 62-176 (317)
118 1nt2_A Fibrillarin-like PRE-rR 99.6 2.9E-15 1E-19 127.2 11.0 104 163-274 54-161 (210)
119 4dcm_A Ribosomal RNA large sub 99.6 4.6E-15 1.6E-19 136.7 13.0 125 151-276 207-336 (375)
120 1l3i_A Precorrin-6Y methyltran 99.6 3.2E-15 1.1E-19 123.9 10.8 118 151-276 18-136 (192)
121 2yxd_A Probable cobalt-precorr 99.6 7E-15 2.4E-19 121.0 12.7 115 150-276 19-133 (183)
122 1jsx_A Glucose-inhibited divis 99.6 4.2E-15 1.4E-19 125.4 11.5 113 154-274 50-165 (207)
123 2esr_A Methyltransferase; stru 99.6 9.7E-16 3.3E-20 126.2 7.3 121 154-278 18-142 (177)
124 2yxe_A Protein-L-isoaspartate 99.6 4.9E-15 1.7E-19 125.8 11.9 116 153-277 64-180 (215)
125 4df3_A Fibrillarin-like rRNA/T 99.6 3.8E-15 1.3E-19 127.8 11.0 108 162-276 73-184 (233)
126 2fpo_A Methylase YHHF; structu 99.6 2.5E-15 8.7E-20 126.8 9.8 122 152-278 39-164 (202)
127 3dmg_A Probable ribosomal RNA 99.6 3.7E-15 1.3E-19 137.5 11.7 105 165-275 232-341 (381)
128 2fhp_A Methylase, putative; al 99.6 2.6E-15 8.8E-20 124.4 9.6 126 149-278 26-158 (187)
129 1vbf_A 231AA long hypothetical 99.6 6.7E-15 2.3E-19 126.3 12.5 112 153-277 57-168 (231)
130 3grz_A L11 mtase, ribosomal pr 99.6 3.8E-15 1.3E-19 125.6 10.7 104 165-277 59-162 (205)
131 3ntv_A MW1564 protein; rossman 99.6 4.1E-15 1.4E-19 128.2 10.8 121 152-277 57-179 (232)
132 3u81_A Catechol O-methyltransf 99.6 1.8E-15 6.1E-20 129.3 8.4 123 152-277 44-173 (221)
133 1i9g_A Hypothetical protein RV 99.6 8.2E-15 2.8E-19 129.5 12.9 120 151-276 84-205 (280)
134 1ws6_A Methyltransferase; stru 99.6 1.1E-15 3.8E-20 124.7 6.6 120 151-278 24-151 (171)
135 3tfw_A Putative O-methyltransf 99.6 1.5E-14 5.2E-19 125.9 13.7 121 152-277 49-173 (248)
136 3evz_A Methyltransferase; NYSG 99.6 2.1E-14 7.3E-19 123.1 14.3 108 164-276 53-181 (230)
137 1g6q_1 HnRNP arginine N-methyl 99.6 9.4E-15 3.2E-19 132.5 12.7 112 157-272 29-143 (328)
138 2vdv_E TRNA (guanine-N(7)-)-me 99.6 8.2E-15 2.8E-19 127.4 11.4 102 165-274 48-173 (246)
139 2pjd_A Ribosomal RNA small sub 99.6 2.9E-15 9.8E-20 136.7 8.7 119 152-276 182-305 (343)
140 3m33_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 128.0 8.7 91 165-271 47-139 (226)
141 2gpy_A O-methyltransferase; st 99.6 1.7E-14 5.7E-19 124.2 12.7 122 151-277 39-163 (233)
142 2b3t_A Protein methyltransfera 99.6 1.4E-14 4.8E-19 128.0 12.5 118 152-274 96-238 (276)
143 3gdh_A Trimethylguanosine synt 99.6 1.6E-16 5.5E-21 137.5 -0.0 115 155-274 66-181 (241)
144 1o54_A SAM-dependent O-methylt 99.6 1.6E-14 5.5E-19 127.7 12.7 116 152-275 98-214 (277)
145 3q87_B N6 adenine specific DNA 99.6 7.4E-15 2.5E-19 120.5 9.8 106 154-276 9-125 (170)
146 3lpm_A Putative methyltransfer 99.6 5.6E-15 1.9E-19 129.4 9.3 115 157-274 39-176 (259)
147 1af7_A Chemotaxis receptor met 99.6 8.6E-15 2.9E-19 129.0 10.5 109 166-274 105-252 (274)
148 3g89_A Ribosomal RNA small sub 99.6 5.5E-15 1.9E-19 128.8 9.2 103 165-274 79-184 (249)
149 3r0q_C Probable protein argini 99.6 9.4E-15 3.2E-19 134.9 11.1 114 157-275 54-170 (376)
150 1jg1_A PIMT;, protein-L-isoasp 99.6 1.2E-14 4E-19 125.4 11.0 114 153-277 78-192 (235)
151 1fp1_D Isoliquiritigenin 2'-O- 99.6 7.5E-15 2.6E-19 135.4 10.1 109 157-278 199-310 (372)
152 1u2z_A Histone-lysine N-methyl 99.6 1.5E-14 5E-19 134.9 12.0 123 153-277 229-362 (433)
153 3reo_A (ISO)eugenol O-methyltr 99.6 2.2E-14 7.5E-19 132.1 13.1 109 158-279 194-305 (368)
154 2frn_A Hypothetical protein PH 99.6 2.2E-14 7.4E-19 127.1 12.0 111 157-277 118-228 (278)
155 2ozv_A Hypothetical protein AT 99.6 1.5E-14 5.2E-19 126.8 10.7 116 157-274 27-170 (260)
156 4dzr_A Protein-(glutamine-N5) 99.6 7.6E-16 2.6E-20 130.2 2.2 115 155-274 18-164 (215)
157 3p9c_A Caffeic acid O-methyltr 99.6 3.9E-14 1.3E-18 130.2 13.9 110 157-279 191-303 (364)
158 3dr5_A Putative O-methyltransf 99.6 1.5E-14 5E-19 123.9 10.1 107 166-277 56-166 (221)
159 3giw_A Protein of unknown func 99.5 2E-14 6.9E-19 125.7 11.0 118 157-277 68-203 (277)
160 1i1n_A Protein-L-isoaspartate 99.5 4E-14 1.4E-18 121.1 12.6 114 157-276 66-184 (226)
161 2y1w_A Histone-arginine methyl 99.5 2.3E-14 7.9E-19 130.9 11.4 114 156-274 40-155 (348)
162 3p2e_A 16S rRNA methylase; met 99.5 5.6E-15 1.9E-19 126.8 6.7 104 165-273 23-138 (225)
163 2yvl_A TRMI protein, hypotheti 99.5 7.4E-14 2.5E-18 120.9 13.8 115 152-275 77-191 (248)
164 3duw_A OMT, O-methyltransferas 99.5 4.2E-14 1.4E-18 120.7 11.5 121 152-277 44-170 (223)
165 3c3p_A Methyltransferase; NP_9 99.5 2.1E-14 7.2E-19 121.6 9.6 110 161-276 51-162 (210)
166 1ixk_A Methyltransferase; open 99.5 2.2E-14 7.6E-19 129.2 10.3 123 153-278 105-250 (315)
167 2b25_A Hypothetical protein; s 99.5 8.1E-14 2.8E-18 126.6 13.9 119 152-275 91-220 (336)
168 2pbf_A Protein-L-isoaspartate 99.5 4.3E-14 1.5E-18 121.0 11.2 114 157-276 69-195 (227)
169 4azs_A Methyltransferase WBDD; 99.5 8E-15 2.7E-19 142.4 7.4 107 166-277 66-176 (569)
170 1o9g_A RRNA methyltransferase; 99.5 1.2E-14 4.2E-19 126.5 7.8 118 157-276 42-216 (250)
171 1ej0_A FTSJ; methyltransferase 99.5 3.1E-14 1E-18 116.2 9.6 100 164-277 20-139 (180)
172 2bm8_A Cephalosporin hydroxyla 99.5 1.4E-14 4.9E-19 125.2 7.7 108 157-275 72-188 (236)
173 4a6d_A Hydroxyindole O-methylt 99.5 1.9E-13 6.5E-18 125.1 15.6 116 157-278 170-287 (353)
174 2ipx_A RRNA 2'-O-methyltransfe 99.5 7.1E-14 2.4E-18 120.3 11.9 107 162-276 73-184 (233)
175 1fp2_A Isoflavone O-methyltran 99.5 2.9E-14 1E-18 130.4 9.7 102 164-278 186-292 (352)
176 3tr6_A O-methyltransferase; ce 99.5 2.1E-14 7.1E-19 122.7 8.2 120 153-277 51-177 (225)
177 3bzb_A Uncharacterized protein 99.5 1.3E-13 4.3E-18 122.3 13.2 121 153-274 66-205 (281)
178 3tma_A Methyltransferase; thum 99.5 9.7E-14 3.3E-18 127.1 12.7 124 149-275 186-318 (354)
179 3bwc_A Spermidine synthase; SA 99.5 3.7E-14 1.3E-18 127.2 9.7 111 165-275 94-211 (304)
180 2zfu_A Nucleomethylin, cerebra 99.5 3.9E-14 1.3E-18 120.2 9.1 90 164-277 65-154 (215)
181 3ajd_A Putative methyltransfer 99.5 2.7E-14 9.2E-19 126.2 8.3 123 157-282 74-219 (274)
182 3r3h_A O-methyltransferase, SA 99.5 6.3E-15 2.2E-19 127.9 4.1 121 152-277 46-173 (242)
183 3a27_A TYW2, uncharacterized p 99.5 8.4E-14 2.9E-18 122.9 11.3 107 164-278 117-223 (272)
184 1nv8_A HEMK protein; class I a 99.5 1.4E-13 4.9E-18 122.1 12.7 117 152-274 109-249 (284)
185 1sui_A Caffeoyl-COA O-methyltr 99.5 5.3E-14 1.8E-18 122.4 9.4 120 153-277 66-193 (247)
186 1g8a_A Fibrillarin-like PRE-rR 99.5 3.3E-13 1.1E-17 115.5 14.1 104 163-274 70-178 (227)
187 3b3j_A Histone-arginine methyl 99.5 8.8E-14 3E-18 132.0 11.4 113 156-273 148-262 (480)
188 1r18_A Protein-L-isoaspartate( 99.5 6E-14 2.1E-18 120.2 9.3 113 157-276 73-196 (227)
189 2hnk_A SAM-dependent O-methylt 99.5 1.4E-13 4.9E-18 118.9 11.4 121 152-277 46-184 (239)
190 3adn_A Spermidine synthase; am 99.5 6.1E-14 2.1E-18 125.0 8.8 112 165-276 82-200 (294)
191 3id6_C Fibrillarin-like rRNA/T 99.5 3.6E-13 1.2E-17 115.7 13.2 112 155-274 62-181 (232)
192 2igt_A SAM dependent methyltra 99.5 5.1E-14 1.7E-18 127.7 8.1 120 154-277 140-275 (332)
193 4hc4_A Protein arginine N-meth 99.5 1.6E-13 5.4E-18 125.9 11.4 103 165-272 82-187 (376)
194 2plw_A Ribosomal RNA methyltra 99.5 6.9E-14 2.4E-18 117.3 8.0 99 164-276 20-156 (201)
195 2nxc_A L11 mtase, ribosomal pr 99.5 7.3E-14 2.5E-18 122.0 7.9 103 165-277 119-221 (254)
196 3lec_A NADB-rossmann superfami 99.5 3.4E-13 1.2E-17 115.2 11.8 129 154-296 11-139 (230)
197 2yxl_A PH0851 protein, 450AA l 99.5 3.3E-13 1.1E-17 127.4 12.9 123 153-278 246-393 (450)
198 3cbg_A O-methyltransferase; cy 99.5 1.2E-13 4.2E-18 118.9 8.9 119 154-277 60-185 (232)
199 1zg3_A Isoflavanone 4'-O-methy 99.5 9.8E-14 3.4E-18 127.2 8.6 101 165-278 192-297 (358)
200 1zq9_A Probable dimethyladenos 99.5 6.4E-14 2.2E-18 124.4 6.6 114 152-271 14-144 (285)
201 2avd_A Catechol-O-methyltransf 99.4 1.7E-13 5.7E-18 117.4 8.7 120 153-277 56-182 (229)
202 2ld4_A Anamorsin; methyltransf 99.4 2.4E-14 8.2E-19 117.8 3.3 92 162-276 8-103 (176)
203 3gnl_A Uncharacterized protein 99.4 5.8E-13 2E-17 114.7 11.7 129 154-296 11-139 (244)
204 1sqg_A SUN protein, FMU protei 99.4 3.6E-13 1.2E-17 126.4 11.3 123 152-278 232-378 (429)
205 2i7c_A Spermidine synthase; tr 99.4 2.5E-13 8.6E-18 120.5 9.6 111 165-275 77-193 (283)
206 3sso_A Methyltransferase; macr 99.4 7.5E-14 2.6E-18 127.7 6.3 110 153-276 204-326 (419)
207 3c3y_A Pfomt, O-methyltransfer 99.4 2.7E-13 9.4E-18 117.1 8.7 119 153-276 57-183 (237)
208 1iy9_A Spermidine synthase; ro 99.4 5.5E-13 1.9E-17 117.8 10.4 109 166-275 75-190 (275)
209 1inl_A Spermidine synthase; be 99.4 5.9E-13 2E-17 118.8 10.2 109 166-275 90-206 (296)
210 2o07_A Spermidine synthase; st 99.4 4.2E-13 1.4E-17 120.2 9.1 111 165-276 94-211 (304)
211 2h00_A Methyltransferase 10 do 99.4 2.5E-13 8.6E-18 118.3 7.4 105 166-272 65-190 (254)
212 3gjy_A Spermidine synthase; AP 99.4 6.6E-13 2.3E-17 118.8 10.2 106 168-276 91-202 (317)
213 2pt6_A Spermidine synthase; tr 99.4 4.1E-13 1.4E-17 121.2 8.8 109 165-275 115-231 (321)
214 1xj5_A Spermidine synthase 1; 99.4 9.5E-13 3.3E-17 119.3 11.3 109 165-274 119-235 (334)
215 3kr9_A SAM-dependent methyltra 99.4 7.9E-13 2.7E-17 112.8 9.8 125 156-295 7-132 (225)
216 2b2c_A Spermidine synthase; be 99.4 3.6E-13 1.2E-17 121.0 8.0 108 165-274 107-222 (314)
217 3hp7_A Hemolysin, putative; st 99.4 3.2E-13 1.1E-17 119.5 7.4 97 165-273 84-184 (291)
218 3opn_A Putative hemolysin; str 99.4 6.2E-14 2.1E-18 120.8 2.4 108 158-274 28-137 (232)
219 2frx_A Hypothetical protein YE 99.4 1.4E-12 4.9E-17 123.5 12.0 123 157-282 106-254 (479)
220 2nyu_A Putative ribosomal RNA 99.4 6.4E-13 2.2E-17 110.8 8.0 100 164-277 20-148 (196)
221 2qm3_A Predicted methyltransfe 99.4 3.2E-12 1.1E-16 117.8 12.7 105 165-274 171-278 (373)
222 1uir_A Polyamine aminopropyltr 99.4 6.4E-13 2.2E-17 119.6 7.6 112 165-276 76-197 (314)
223 3tm4_A TRNA (guanine N2-)-meth 99.4 2.6E-12 9E-17 118.3 11.3 119 151-274 203-329 (373)
224 3k6r_A Putative transferase PH 99.4 3.2E-12 1.1E-16 112.5 11.0 127 157-293 118-244 (278)
225 1ne2_A Hypothetical protein TA 99.4 4E-12 1.4E-16 106.6 10.9 96 164-273 49-146 (200)
226 3m6w_A RRNA methylase; rRNA me 99.3 5.9E-13 2E-17 125.2 6.2 119 157-279 92-234 (464)
227 3dou_A Ribosomal RNA large sub 99.3 1.9E-12 6.3E-17 108.2 8.4 98 164-277 23-142 (191)
228 1mjf_A Spermidine synthase; sp 99.3 1.7E-12 5.9E-17 115.0 8.6 107 165-275 74-194 (281)
229 2oxt_A Nucleoside-2'-O-methylt 99.3 2.9E-13 9.8E-18 118.9 3.4 107 162-276 70-187 (265)
230 2wa2_A Non-structural protein 99.3 2.2E-13 7.5E-18 120.3 2.6 104 164-276 80-195 (276)
231 2cmg_A Spermidine synthase; tr 99.3 2.6E-12 8.9E-17 112.6 9.3 98 166-274 72-171 (262)
232 2f8l_A Hypothetical protein LM 99.3 4.5E-12 1.6E-16 115.5 10.4 125 148-277 108-259 (344)
233 1wy7_A Hypothetical protein PH 99.3 1.7E-11 5.7E-16 103.2 13.2 100 164-273 47-148 (207)
234 3lcv_B Sisomicin-gentamicin re 99.3 3E-12 1E-16 110.2 8.3 114 154-275 122-237 (281)
235 3c0k_A UPF0064 protein YCCW; P 99.3 4.6E-12 1.6E-16 117.6 9.4 111 165-277 219-342 (396)
236 1qam_A ERMC' methyltransferase 99.3 1.2E-12 4.2E-17 113.6 5.0 113 151-270 15-142 (244)
237 3frh_A 16S rRNA methylase; met 99.3 7.5E-12 2.6E-16 106.7 9.6 102 165-274 104-206 (253)
238 2b78_A Hypothetical protein SM 99.3 2.4E-12 8.4E-17 119.0 6.7 110 165-277 211-334 (385)
239 3m4x_A NOL1/NOP2/SUN family pr 99.3 1.7E-12 5.7E-17 122.0 5.3 120 157-279 96-239 (456)
240 2as0_A Hypothetical protein PH 99.3 4.5E-12 1.5E-16 117.7 8.1 109 166-277 217-338 (396)
241 1wxx_A TT1595, hypothetical pr 99.3 2.8E-12 9.6E-17 118.5 6.0 107 166-277 209-328 (382)
242 3v97_A Ribosomal RNA large sub 99.3 1E-11 3.6E-16 122.9 9.5 110 166-277 539-660 (703)
243 4dmg_A Putative uncharacterize 99.2 1.2E-11 4.1E-16 114.5 8.5 107 166-278 214-330 (393)
244 2h1r_A Dimethyladenosine trans 99.2 1.1E-11 3.7E-16 110.8 7.1 88 152-246 28-115 (299)
245 2yx1_A Hypothetical protein MJ 99.2 3.6E-11 1.2E-15 109.2 10.4 102 165-278 194-295 (336)
246 1uwv_A 23S rRNA (uracil-5-)-me 99.2 7.4E-11 2.5E-15 110.7 12.8 112 154-274 274-389 (433)
247 2okc_A Type I restriction enzy 99.2 2.3E-11 8E-16 114.6 9.2 128 147-276 152-309 (445)
248 1yub_A Ermam, rRNA methyltrans 99.2 5.1E-14 1.8E-18 122.3 -8.7 113 154-274 17-145 (245)
249 2p41_A Type II methyltransfera 99.2 2.5E-12 8.6E-17 115.1 2.0 103 164-276 80-193 (305)
250 2jjq_A Uncharacterized RNA met 99.2 2.5E-10 8.5E-15 106.7 13.6 100 164-274 288-387 (425)
251 3gru_A Dimethyladenosine trans 99.2 9.6E-11 3.3E-15 104.1 9.8 89 151-246 35-123 (295)
252 3k0b_A Predicted N6-adenine-sp 99.1 1.6E-10 5.5E-15 106.9 10.5 123 150-275 185-351 (393)
253 3ldg_A Putative uncharacterize 99.1 3E-10 1E-14 104.7 11.7 122 151-275 179-344 (384)
254 3ldu_A Putative methylase; str 99.1 1.6E-10 5.6E-15 106.7 9.8 122 151-275 180-345 (385)
255 2b9e_A NOL1/NOP2/SUN domain fa 99.1 5.1E-10 1.7E-14 100.2 12.6 118 157-278 93-238 (309)
256 2ih2_A Modification methylase 99.1 7.8E-11 2.7E-15 110.0 7.5 119 146-277 19-167 (421)
257 2qfm_A Spermine synthase; sper 99.1 1.7E-10 5.9E-15 104.4 7.7 110 166-276 188-316 (364)
258 3bt7_A TRNA (uracil-5-)-methyl 99.1 2.9E-10 9.8E-15 104.5 8.2 112 153-276 201-328 (369)
259 3tqs_A Ribosomal RNA small sub 99.0 5.8E-10 2E-14 97.1 9.5 85 152-244 15-103 (255)
260 2xyq_A Putative 2'-O-methyl tr 99.0 4E-10 1.4E-14 99.7 7.2 96 163-277 60-174 (290)
261 2ar0_A M.ecoki, type I restric 99.0 6.2E-10 2.1E-14 107.1 8.2 129 146-277 149-315 (541)
262 2dul_A N(2),N(2)-dimethylguano 99.0 5.3E-10 1.8E-14 102.9 7.3 102 166-274 47-164 (378)
263 1m6y_A S-adenosyl-methyltransf 99.0 5.3E-10 1.8E-14 99.6 6.6 88 154-245 14-106 (301)
264 3fut_A Dimethyladenosine trans 99.0 7.7E-10 2.6E-14 97.1 7.5 86 151-245 32-118 (271)
265 3axs_A Probable N(2),N(2)-dime 98.9 1.6E-09 5.5E-14 99.8 7.8 104 165-274 51-158 (392)
266 3o4f_A Spermidine synthase; am 98.9 7.4E-09 2.5E-13 91.3 11.4 111 165-276 82-200 (294)
267 3lkd_A Type I restriction-modi 98.9 1.9E-08 6.3E-13 96.6 13.2 165 129-295 175-378 (542)
268 3v97_A Ribosomal RNA large sub 98.9 1E-08 3.5E-13 101.6 11.1 126 149-276 173-349 (703)
269 3khk_A Type I restriction-modi 98.8 4.3E-09 1.5E-13 101.1 8.1 147 146-295 225-416 (544)
270 2r6z_A UPF0341 protein in RSP 98.8 5.2E-10 1.8E-14 97.7 1.4 89 157-249 74-173 (258)
271 3cvo_A Methyltransferase-like 98.8 6.9E-08 2.4E-12 80.6 14.0 111 155-275 21-155 (202)
272 3ftd_A Dimethyladenosine trans 98.8 1.6E-08 5.4E-13 87.8 10.3 76 152-235 17-92 (249)
273 4gqb_A Protein arginine N-meth 98.8 7.9E-09 2.7E-13 100.2 9.1 99 167-271 358-464 (637)
274 3uzu_A Ribosomal RNA small sub 98.8 1E-08 3.5E-13 90.4 7.6 77 152-235 28-106 (279)
275 3evf_A RNA-directed RNA polyme 98.8 5E-09 1.7E-13 90.8 5.2 110 162-277 70-187 (277)
276 2efj_A 3,7-dimethylxanthine me 98.7 2.1E-08 7.3E-13 91.7 7.5 109 167-280 53-231 (384)
277 1qyr_A KSGA, high level kasuga 98.7 6.6E-09 2.3E-13 90.3 3.2 75 153-234 8-82 (252)
278 3b5i_A S-adenosyl-L-methionine 98.7 5.9E-08 2E-12 88.7 9.4 113 167-279 53-230 (374)
279 3ua3_A Protein arginine N-meth 98.6 4.6E-08 1.6E-12 94.9 7.7 101 167-271 410-531 (745)
280 3ll7_A Putative methyltransfer 98.6 2.5E-08 8.4E-13 92.2 5.2 74 166-244 93-170 (410)
281 2oyr_A UPF0341 protein YHIQ; a 98.6 1.8E-08 6.3E-13 87.6 4.1 109 157-268 77-194 (258)
282 3s1s_A Restriction endonucleas 98.5 4.2E-07 1.4E-11 89.6 10.6 149 146-294 295-485 (878)
283 3gcz_A Polyprotein; flavivirus 98.5 4.4E-08 1.5E-12 85.0 3.1 110 162-277 86-204 (282)
284 1m6e_X S-adenosyl-L-methionnin 98.5 7.4E-08 2.5E-12 87.5 4.7 112 167-280 52-215 (359)
285 4fzv_A Putative methyltransfer 98.5 4E-07 1.4E-11 82.8 9.4 130 157-286 139-296 (359)
286 2jny_A Uncharacterized BCR; st 98.5 6.9E-08 2.3E-12 65.2 2.5 46 57-111 7-52 (67)
287 2jr6_A UPF0434 protein NMA0874 98.4 8.5E-08 2.9E-12 65.0 2.6 46 57-111 5-50 (68)
288 2js4_A UPF0434 protein BB2007; 98.4 9E-08 3.1E-12 65.3 2.6 46 57-111 5-50 (70)
289 2hf1_A Tetraacyldisaccharide-1 98.4 8.2E-08 2.8E-12 65.1 2.1 46 57-111 5-50 (68)
290 2qy6_A UPF0209 protein YFCK; s 98.4 1.7E-07 5.9E-12 81.5 4.6 108 165-272 59-211 (257)
291 2pk7_A Uncharacterized protein 98.4 9.7E-08 3.3E-12 64.9 2.2 46 57-111 5-50 (69)
292 2wk1_A NOVP; transferase, O-me 98.3 6.8E-07 2.3E-11 78.5 6.9 109 164-275 104-245 (282)
293 4auk_A Ribosomal RNA large sub 98.3 9.4E-07 3.2E-11 80.0 7.9 88 164-267 209-296 (375)
294 3ufb_A Type I restriction-modi 98.3 4.9E-06 1.7E-10 79.7 12.5 163 129-295 176-382 (530)
295 3c6k_A Spermine synthase; sper 98.3 1.3E-06 4.4E-11 79.4 7.5 108 166-274 205-331 (381)
296 2kpi_A Uncharacterized protein 98.2 4E-07 1.4E-11 59.3 2.4 43 57-110 7-51 (56)
297 1wg8_A Predicted S-adenosylmet 98.2 1.8E-06 6.1E-11 75.2 6.6 80 155-243 11-95 (285)
298 3eld_A Methyltransferase; flav 98.2 7.1E-06 2.4E-10 71.6 10.0 107 164-276 79-193 (300)
299 2k4m_A TR8_protein, UPF0146 pr 98.2 2.5E-06 8.7E-11 66.6 5.7 87 166-278 35-125 (153)
300 2k5r_A Uncharacterized protein 98.1 1.1E-06 3.9E-11 63.5 2.3 54 57-110 5-76 (97)
301 3lkz_A Non-structural protein 98.0 2.2E-05 7.6E-10 68.2 9.6 112 158-276 86-206 (321)
302 2zig_A TTHA0409, putative modi 98.0 2.4E-05 8.3E-10 69.3 9.3 60 151-213 221-280 (297)
303 3p8z_A Mtase, non-structural p 97.9 4.7E-05 1.6E-09 64.1 9.0 112 158-277 70-189 (267)
304 2px2_A Genome polyprotein [con 97.9 1.3E-05 4.3E-10 68.6 5.0 103 163-276 70-185 (269)
305 3tka_A Ribosomal RNA small sub 97.5 7.2E-05 2.5E-09 66.7 4.1 83 155-244 46-135 (347)
306 1g60_A Adenine-specific methyl 97.5 0.00039 1.3E-08 60.2 8.6 61 150-213 197-257 (260)
307 1i4w_A Mitochondrial replicati 97.4 0.00053 1.8E-08 62.0 9.4 75 151-231 37-117 (353)
308 2vz8_A Fatty acid synthase; tr 97.3 2.5E-05 8.4E-10 87.1 -1.1 104 166-275 1240-1349(2512)
309 1rjd_A PPM1P, carboxy methyl t 97.1 0.0067 2.3E-07 54.4 12.6 118 158-277 89-235 (334)
310 3r24_A NSP16, 2'-O-methyl tran 97.0 0.0012 4.2E-08 57.3 6.5 96 164-277 107-220 (344)
311 1kol_A Formaldehyde dehydrogen 96.7 0.0079 2.7E-07 55.1 10.3 105 161-275 180-301 (398)
312 1pft_A TFIIB, PFTFIIBN; N-term 96.6 0.0011 3.9E-08 41.9 2.7 33 57-98 2-35 (50)
313 1f8f_A Benzyl alcohol dehydrog 96.6 0.011 3.8E-07 53.6 10.0 102 160-276 184-291 (371)
314 2dph_A Formaldehyde dismutase; 96.6 0.0054 1.8E-07 56.3 7.9 105 160-275 179-300 (398)
315 2uyo_A Hypothetical protein ML 96.5 0.039 1.3E-06 48.9 12.6 107 167-276 103-220 (310)
316 2oo3_A Protein involved in cat 96.3 0.0012 4.2E-08 57.4 1.8 105 166-277 91-201 (283)
317 4ej6_A Putative zinc-binding d 96.2 0.027 9.3E-07 51.0 10.1 100 160-276 176-286 (370)
318 3two_A Mannitol dehydrogenase; 95.9 0.018 6.3E-07 51.6 7.5 96 161-276 171-267 (348)
319 3m6i_A L-arabinitol 4-dehydrog 95.9 0.071 2.4E-06 48.0 11.4 104 160-277 173-286 (363)
320 4dvj_A Putative zinc-dependent 95.8 0.028 9.7E-07 50.8 8.7 92 166-274 171-270 (363)
321 2py6_A Methyltransferase FKBM; 95.8 0.023 8E-07 52.3 8.1 63 164-228 224-291 (409)
322 1pqw_A Polyketide synthase; ro 95.8 0.032 1.1E-06 45.6 8.0 95 161-275 33-138 (198)
323 1pl8_A Human sorbitol dehydrog 95.8 0.028 9.6E-07 50.6 8.2 101 160-275 165-274 (356)
324 1boo_A Protein (N-4 cytosine-s 95.7 0.018 6.1E-07 51.3 6.8 60 151-213 238-297 (323)
325 3tos_A CALS11; methyltransfera 95.6 0.027 9.1E-07 48.4 7.2 108 167-276 70-219 (257)
326 2b5w_A Glucose dehydrogenase; 95.6 0.034 1.2E-06 50.0 8.3 98 161-276 161-275 (357)
327 3fpc_A NADP-dependent alcohol 95.6 0.026 9E-07 50.7 7.5 102 160-276 160-268 (352)
328 3q87_A Putative uncharacterize 95.6 0.0036 1.2E-07 47.3 1.4 29 81-109 93-121 (125)
329 3s2e_A Zinc-containing alcohol 95.6 0.037 1.3E-06 49.4 8.3 98 160-275 160-264 (340)
330 1e3j_A NADP(H)-dependent ketos 95.5 0.097 3.3E-06 46.9 10.8 100 160-275 162-272 (352)
331 1eg2_A Modification methylase 95.5 0.028 9.4E-07 50.1 7.0 61 150-213 227-290 (319)
332 3uko_A Alcohol dehydrogenase c 95.5 0.033 1.1E-06 50.6 7.7 102 160-276 187-297 (378)
333 3goh_A Alcohol dehydrogenase, 95.5 0.01 3.5E-07 52.5 4.1 93 160-274 136-229 (315)
334 3jv7_A ADH-A; dehydrogenase, n 95.4 0.038 1.3E-06 49.5 7.7 98 163-276 168-272 (345)
335 3uog_A Alcohol dehydrogenase; 95.4 0.033 1.1E-06 50.3 7.2 100 160-276 183-289 (363)
336 1v3u_A Leukotriene B4 12- hydr 95.2 0.062 2.1E-06 47.7 8.5 97 160-275 139-245 (333)
337 1p0f_A NADP-dependent alcohol 95.2 0.044 1.5E-06 49.6 7.5 101 160-275 185-294 (373)
338 1rjw_A ADH-HT, alcohol dehydro 95.1 0.075 2.6E-06 47.4 8.6 95 163-275 161-262 (339)
339 1e3i_A Alcohol dehydrogenase, 95.1 0.054 1.9E-06 49.1 7.7 101 160-275 189-298 (376)
340 4a2c_A Galactitol-1-phosphate 95.0 0.16 5.6E-06 45.1 10.8 103 159-276 153-262 (346)
341 4b7c_A Probable oxidoreductase 95.0 0.09 3.1E-06 46.7 8.9 100 158-275 141-249 (336)
342 3g7u_A Cytosine-specific methy 95.0 0.058 2E-06 49.1 7.6 70 168-246 3-80 (376)
343 1cdo_A Alcohol dehydrogenase; 95.0 0.07 2.4E-06 48.3 8.2 101 160-275 186-295 (374)
344 3ip1_A Alcohol dehydrogenase, 94.9 0.13 4.6E-06 47.0 10.1 98 163-276 210-320 (404)
345 2jhf_A Alcohol dehydrogenase E 94.9 0.078 2.7E-06 48.0 8.2 101 160-275 185-294 (374)
346 4eez_A Alcohol dehydrogenase 1 94.8 0.13 4.3E-06 45.9 9.5 100 161-275 158-264 (348)
347 3iht_A S-adenosyl-L-methionine 94.8 0.27 9.2E-06 38.5 9.8 90 167-276 41-149 (174)
348 3qwb_A Probable quinone oxidor 94.8 0.086 2.9E-06 46.8 8.2 97 162-275 144-248 (334)
349 3jyn_A Quinone oxidoreductase; 94.7 0.1 3.4E-06 46.2 8.5 98 161-277 135-242 (325)
350 3gms_A Putative NADPH:quinone 94.7 0.058 2E-06 48.1 6.9 99 159-276 137-245 (340)
351 1g55_A DNA cytosine methyltran 94.7 0.016 5.6E-07 52.1 3.1 72 167-246 2-77 (343)
352 3vyw_A MNMC2; tRNA wobble urid 94.6 0.053 1.8E-06 47.7 6.2 107 166-273 96-225 (308)
353 1uuf_A YAHK, zinc-type alcohol 94.6 0.038 1.3E-06 50.1 5.4 95 162-275 190-289 (369)
354 2fzw_A Alcohol dehydrogenase c 94.6 0.084 2.9E-06 47.7 7.8 101 160-275 184-293 (373)
355 3fbg_A Putative arginate lyase 94.5 0.1 3.5E-06 46.6 8.0 91 166-274 150-248 (346)
356 2j3h_A NADP-dependent oxidored 94.5 0.11 3.7E-06 46.3 8.1 98 160-275 149-256 (345)
357 2hcy_A Alcohol dehydrogenase 1 94.1 0.11 3.7E-06 46.5 7.2 96 162-275 165-270 (347)
358 1jvb_A NAD(H)-dependent alcoho 94.0 0.12 4E-06 46.2 7.2 95 162-275 166-272 (347)
359 1yb5_A Quinone oxidoreductase; 94.0 0.14 4.7E-06 45.9 7.6 95 161-274 165-269 (351)
360 1vq8_Z 50S ribosomal protein L 94.0 0.015 5.2E-07 40.7 0.9 30 59-97 26-55 (83)
361 3qv2_A 5-cytosine DNA methyltr 93.9 0.13 4.5E-06 45.8 7.3 90 167-265 10-117 (327)
362 2k5c_A Uncharacterized protein 93.8 0.024 8.2E-07 38.7 1.7 39 59-97 7-61 (95)
363 1vj0_A Alcohol dehydrogenase, 93.8 0.077 2.6E-06 48.2 5.7 100 161-275 189-299 (380)
364 2j6a_A Protein TRM112; transla 93.8 0.018 6.2E-07 44.4 1.2 30 82-111 104-133 (141)
365 4eye_A Probable oxidoreductase 93.7 0.11 3.8E-06 46.3 6.6 98 160-275 153-258 (342)
366 2eih_A Alcohol dehydrogenase; 93.6 0.13 4.4E-06 45.9 6.8 95 163-276 163-267 (343)
367 2d8a_A PH0655, probable L-thre 93.6 0.17 5.8E-06 45.2 7.5 97 161-275 163-268 (348)
368 2c0c_A Zinc binding alcohol de 93.5 0.27 9.2E-06 44.2 8.7 100 160-276 157-263 (362)
369 2cdc_A Glucose dehydrogenase g 93.5 0.19 6.5E-06 45.2 7.7 87 167-275 181-279 (366)
370 3tqh_A Quinone oxidoreductase; 93.5 0.33 1.1E-05 42.7 9.1 97 160-274 146-245 (321)
371 3gaz_A Alcohol dehydrogenase s 93.4 0.14 4.9E-06 45.6 6.7 95 160-274 144-246 (343)
372 3fwz_A Inner membrane protein 93.3 0.64 2.2E-05 35.4 9.5 91 167-274 7-105 (140)
373 1dl6_A Transcription factor II 93.3 0.041 1.4E-06 35.7 2.1 31 59-97 10-40 (58)
374 2h6e_A ADH-4, D-arabinose 1-de 93.2 0.089 3E-06 47.0 4.9 96 163-275 168-270 (344)
375 4dup_A Quinone oxidoreductase; 93.1 0.22 7.4E-06 44.6 7.5 97 160-275 161-266 (353)
376 3krt_A Crotonyl COA reductase; 93.1 0.38 1.3E-05 44.7 9.4 97 162-275 224-345 (456)
377 3nx4_A Putative oxidoreductase 93.1 0.19 6.3E-06 44.4 6.9 92 169-276 149-243 (324)
378 2c7p_A Modification methylase 93.0 0.15 5.2E-06 45.4 6.1 67 167-244 11-78 (327)
379 1piw_A Hypothetical zinc-type 93.0 0.059 2E-06 48.5 3.5 99 162-275 175-277 (360)
380 2qrv_A DNA (cytosine-5)-methyl 92.5 0.15 5.3E-06 44.6 5.4 72 165-244 14-90 (295)
381 3j20_Y 30S ribosomal protein S 92.4 0.046 1.6E-06 34.3 1.3 34 55-97 14-47 (50)
382 1qor_A Quinone oxidoreductase; 92.3 0.26 9E-06 43.4 6.8 95 161-275 135-240 (327)
383 2cf5_A Atccad5, CAD, cinnamyl 92.3 0.087 3E-06 47.4 3.6 97 162-275 175-276 (357)
384 2zb4_A Prostaglandin reductase 92.3 0.63 2.1E-05 41.5 9.3 99 160-275 152-261 (357)
385 1zkd_A DUF185; NESG, RPR58, st 92.2 0.37 1.3E-05 43.8 7.7 77 166-251 80-163 (387)
386 2j8z_A Quinone oxidoreductase; 92.2 0.31 1E-05 43.7 7.2 96 161-275 157-262 (354)
387 2dq4_A L-threonine 3-dehydroge 92.0 0.13 4.3E-06 45.9 4.3 96 161-275 160-263 (343)
388 3llv_A Exopolyphosphatase-rela 91.9 1.5 5E-05 33.2 9.8 90 167-274 6-103 (141)
389 3c85_A Putative glutathione-re 91.7 0.73 2.5E-05 36.7 8.2 91 167-274 39-139 (183)
390 1qyp_A RNA polymerase II; tran 91.5 0.072 2.4E-06 34.4 1.5 39 60-98 15-54 (57)
391 1yqd_A Sinapyl alcohol dehydro 91.5 0.17 5.8E-06 45.6 4.6 97 162-275 182-283 (366)
392 4h0n_A DNMT2; SAH binding, tra 91.4 0.12 4E-06 46.2 3.4 69 168-244 4-76 (333)
393 2akl_A PHNA-like protein PA012 91.3 0.11 3.7E-06 39.0 2.4 31 58-98 25-55 (138)
394 2vn8_A Reticulon-4-interacting 91.1 0.36 1.2E-05 43.5 6.4 93 164-274 181-280 (375)
395 3jyw_9 60S ribosomal protein L 91.1 0.11 3.9E-06 34.9 2.2 30 59-97 25-54 (72)
396 4eso_A Putative oxidoreductase 91.0 0.96 3.3E-05 38.2 8.7 101 166-275 7-139 (255)
397 3pxx_A Carveol dehydrogenase; 90.8 1.2 4.3E-05 38.0 9.4 103 166-274 9-153 (287)
398 4a0s_A Octenoyl-COA reductase/ 90.7 0.78 2.7E-05 42.4 8.5 98 162-275 216-337 (447)
399 1xa0_A Putative NADPH dependen 90.7 0.25 8.5E-06 43.6 4.8 96 163-275 145-247 (328)
400 3ioy_A Short-chain dehydrogena 90.6 1.6 5.3E-05 38.4 10.0 78 166-247 7-97 (319)
401 4f3n_A Uncharacterized ACR, CO 90.6 0.42 1.4E-05 44.0 6.3 46 167-212 138-188 (432)
402 1tfi_A Transcriptional elongat 90.5 0.087 3E-06 33.0 1.1 40 58-97 7-47 (50)
403 3is3_A 17BETA-hydroxysteroid d 90.3 2 7E-05 36.4 10.3 105 166-276 17-154 (270)
404 3ps9_A TRNA 5-methylaminomethy 90.3 0.22 7.5E-06 48.8 4.4 108 166-274 66-219 (676)
405 3ijr_A Oxidoreductase, short c 90.2 1.8 6E-05 37.4 9.9 103 166-274 46-182 (291)
406 3l9w_A Glutathione-regulated p 90.2 1.3 4.4E-05 40.7 9.2 93 167-276 4-104 (413)
407 3o26_A Salutaridine reductase; 90.0 2.3 8E-05 36.5 10.6 77 166-247 11-101 (311)
408 1tt7_A YHFP; alcohol dehydroge 89.9 0.26 8.8E-06 43.6 4.3 96 163-275 146-248 (330)
409 1iz0_A Quinone oxidoreductase; 89.9 0.16 5.5E-06 44.3 2.9 92 164-275 123-219 (302)
410 3ius_A Uncharacterized conserv 89.9 2.9 0.0001 35.4 11.0 70 168-253 6-79 (286)
411 1wly_A CAAR, 2-haloacrylate re 89.6 0.58 2E-05 41.3 6.3 96 161-275 140-245 (333)
412 3pvc_A TRNA 5-methylaminomethy 89.5 0.29 9.8E-06 48.1 4.6 108 166-274 58-211 (689)
413 3grk_A Enoyl-(acyl-carrier-pro 89.5 2.3 7.7E-05 36.8 9.9 103 166-275 30-170 (293)
414 3r3s_A Oxidoreductase; structu 89.5 1.7 5.8E-05 37.6 9.1 105 166-276 48-187 (294)
415 3v2g_A 3-oxoacyl-[acyl-carrier 89.4 2.4 8.3E-05 36.1 10.0 104 166-275 30-166 (271)
416 1twf_L ABC10-alpha, DNA-direct 89.4 0.2 6.9E-06 33.7 2.3 28 58-95 26-53 (70)
417 2vhw_A Alanine dehydrogenase; 89.2 0.19 6.6E-06 45.6 2.9 102 166-275 167-269 (377)
418 4g81_D Putative hexonate dehyd 89.1 1.6 5.6E-05 37.1 8.5 78 166-249 8-98 (255)
419 3ce6_A Adenosylhomocysteinase; 89.1 0.96 3.3E-05 42.5 7.6 91 164-275 271-362 (494)
420 3tsc_A Putative oxidoreductase 89.0 2.6 8.9E-05 35.9 9.9 77 166-248 10-112 (277)
421 1wma_A Carbonyl reductase [NAD 88.9 0.77 2.6E-05 38.8 6.4 103 166-274 3-138 (276)
422 3j21_i 50S ribosomal protein L 88.9 0.11 3.9E-06 36.0 0.8 29 60-97 35-63 (83)
423 3oig_A Enoyl-[acyl-carrier-pro 88.8 1.4 4.7E-05 37.3 7.9 106 166-276 6-149 (266)
424 3ggo_A Prephenate dehydrogenas 88.7 2.3 7.7E-05 37.4 9.4 92 167-272 33-126 (314)
425 1pjc_A Protein (L-alanine dehy 88.5 0.22 7.4E-06 44.9 2.7 102 166-276 166-269 (361)
426 4a27_A Synaptic vesicle membra 88.2 0.46 1.6E-05 42.4 4.7 97 160-275 136-239 (349)
427 3gqv_A Enoyl reductase; medium 88.2 2 7E-05 38.5 9.0 93 165-274 163-263 (371)
428 2eez_A Alanine dehydrogenase; 88.2 0.29 1E-05 44.2 3.3 101 166-275 165-267 (369)
429 3iz5_m 60S ribosomal protein L 88.1 0.14 4.9E-06 36.2 0.9 29 60-97 36-64 (92)
430 3cc2_Z 50S ribosomal protein L 88.1 0.14 4.9E-06 37.7 0.9 30 59-97 59-88 (116)
431 3edm_A Short chain dehydrogena 87.9 0.83 2.8E-05 38.7 5.9 104 166-275 7-144 (259)
432 2jne_A Hypothetical protein YF 87.8 0.21 7.1E-06 35.5 1.6 26 61-97 33-58 (101)
433 1gh9_A 8.3 kDa protein (gene M 87.8 0.25 8.6E-06 33.3 2.0 31 60-101 4-34 (71)
434 3j21_g 50S ribosomal protein L 87.7 0.28 9.5E-06 30.7 2.0 25 59-96 13-37 (51)
435 4a17_Y RPL37A, 60S ribosomal p 87.6 0.15 5.2E-06 36.7 0.8 30 59-97 35-64 (103)
436 2zig_A TTHA0409, putative modi 87.4 0.29 9.9E-06 42.8 2.7 57 219-275 20-98 (297)
437 3po3_S Transcription elongatio 87.3 0.37 1.3E-05 38.8 3.0 40 58-97 135-175 (178)
438 3izc_m 60S ribosomal protein R 87.2 0.17 5.7E-06 35.8 0.8 30 59-97 35-64 (92)
439 1ja9_A 4HNR, 1,3,6,8-tetrahydr 87.1 1.2 4.1E-05 37.7 6.5 76 166-247 20-109 (274)
440 4fn4_A Short chain dehydrogena 87.0 3.3 0.00011 35.2 9.2 75 166-246 6-93 (254)
441 4dio_A NAD(P) transhydrogenase 87.0 0.22 7.4E-06 45.6 1.7 42 166-208 189-231 (405)
442 2gdz_A NAD+-dependent 15-hydro 87.0 2.9 9.8E-05 35.3 8.9 105 167-275 7-140 (267)
443 3ubt_Y Modification methylase 87.0 0.84 2.9E-05 40.2 5.6 66 169-244 2-68 (331)
444 1xhl_A Short-chain dehydrogena 87.0 2.7 9.3E-05 36.3 8.8 79 166-247 25-116 (297)
445 2k4x_A 30S ribosomal protein S 86.9 0.3 1E-05 31.2 1.8 34 55-97 13-46 (55)
446 1lss_A TRK system potassium up 86.9 4.8 0.00016 29.8 9.2 91 167-274 4-102 (140)
447 1zsy_A Mitochondrial 2-enoyl t 86.9 1.7 5.8E-05 38.7 7.6 98 160-274 161-270 (357)
448 3p2y_A Alanine dehydrogenase/p 86.8 0.12 4.1E-06 46.9 -0.1 41 166-208 183-225 (381)
449 1ffk_W Ribosomal protein L37AE 86.5 0.18 6.1E-06 34.1 0.7 30 59-97 26-55 (73)
450 1l7d_A Nicotinamide nucleotide 86.1 0.31 1.1E-05 44.3 2.3 42 166-208 171-213 (384)
451 3k31_A Enoyl-(acyl-carrier-pro 86.0 1.8 6.2E-05 37.4 7.1 103 166-275 29-169 (296)
452 4fgs_A Probable dehydrogenase 85.9 2.3 7.8E-05 36.6 7.6 101 166-275 28-160 (273)
453 1xg5_A ARPG836; short chain de 85.8 5.8 0.0002 33.6 10.2 78 166-247 31-121 (279)
454 3u5t_A 3-oxoacyl-[acyl-carrier 85.5 2.3 8E-05 36.1 7.5 104 166-275 26-162 (267)
455 3h0g_I DNA-directed RNA polyme 85.3 0.78 2.7E-05 34.0 3.7 42 57-98 69-111 (113)
456 4dcm_A Ribosomal RNA large sub 85.2 2.9 0.0001 37.6 8.3 101 166-276 38-138 (375)
457 3sx2_A Putative 3-ketoacyl-(ac 85.1 2.9 0.0001 35.5 8.0 78 166-249 12-114 (278)
458 1boo_A Protein (N-4 cytosine-s 85.0 0.45 1.6E-05 42.1 2.7 57 219-275 13-85 (323)
459 1x13_A NAD(P) transhydrogenase 84.8 0.27 9.4E-06 45.0 1.2 42 166-208 171-213 (401)
460 3pi7_A NADH oxidoreductase; gr 84.8 1.2 4.2E-05 39.5 5.5 89 168-275 166-264 (349)
461 2jrp_A Putative cytoplasmic pr 84.6 0.39 1.4E-05 33.1 1.6 12 61-72 3-14 (81)
462 3me5_A Cytosine-specific methy 84.1 0.94 3.2E-05 42.5 4.6 72 154-231 69-146 (482)
463 3e8x_A Putative NAD-dependent 84.1 3.9 0.00013 33.6 8.2 76 166-253 20-100 (236)
464 1g0o_A Trihydroxynaphthalene r 83.9 4.6 0.00016 34.4 8.7 104 166-275 28-164 (283)
465 3f9i_A 3-oxoacyl-[acyl-carrier 83.8 6.9 0.00024 32.4 9.6 74 165-247 12-94 (249)
466 4e6p_A Probable sorbitol dehyd 83.7 3.9 0.00013 34.3 8.1 73 166-247 7-92 (259)
467 3qiv_A Short-chain dehydrogena 83.7 5.3 0.00018 33.2 8.9 76 166-247 8-96 (253)
468 3ucx_A Short chain dehydrogena 83.7 6.4 0.00022 33.1 9.4 75 166-246 10-97 (264)
469 1gee_A Glucose 1-dehydrogenase 83.5 4.4 0.00015 33.8 8.4 76 166-247 6-95 (261)
470 3tjr_A Short chain dehydrogena 83.1 6 0.00021 34.1 9.2 77 165-247 29-118 (301)
471 3ksu_A 3-oxoacyl-acyl carrier 83.1 3.9 0.00013 34.5 7.8 104 166-275 10-148 (262)
472 3ek2_A Enoyl-(acyl-carrier-pro 82.3 3.9 0.00013 34.3 7.6 104 165-275 12-154 (271)
473 2g1u_A Hypothetical protein TM 82.2 1.8 6.2E-05 33.4 4.9 94 165-274 17-118 (155)
474 2ew2_A 2-dehydropantoate 2-red 82.1 5 0.00017 34.5 8.4 92 168-274 4-108 (316)
475 3c24_A Putative oxidoreductase 82.1 6.2 0.00021 33.7 8.8 85 168-272 12-99 (286)
476 2f1k_A Prephenate dehydrogenas 81.9 4.6 0.00016 34.3 7.9 85 169-271 2-88 (279)
477 3gaf_A 7-alpha-hydroxysteroid 81.8 6.7 0.00023 32.9 8.8 76 166-247 11-99 (256)
478 2ct7_A Ring finger protein 31; 81.7 1.6 5.6E-05 30.4 4.0 29 61-98 26-54 (86)
479 3h7a_A Short chain dehydrogena 81.5 4 0.00014 34.2 7.3 76 166-247 6-93 (252)
480 2x9g_A PTR1, pteridine reducta 81.1 6.1 0.00021 33.7 8.4 76 166-247 22-116 (288)
481 3ga8_A HTH-type transcriptiona 81.1 0.2 6.8E-06 34.5 -1.0 36 61-97 3-46 (78)
482 3rkr_A Short chain oxidoreduct 80.8 6.4 0.00022 33.0 8.4 76 166-247 28-116 (262)
483 3sju_A Keto reductase; short-c 80.6 7.9 0.00027 32.9 9.0 75 167-247 24-111 (279)
484 3lyl_A 3-oxoacyl-(acyl-carrier 80.5 7.6 0.00026 32.1 8.6 76 166-247 4-92 (247)
485 1zcj_A Peroxisomal bifunctiona 80.3 8.9 0.0003 35.5 9.7 95 167-272 37-148 (463)
486 3imf_A Short chain dehydrogena 80.2 6 0.00021 33.1 7.9 75 166-246 5-92 (257)
487 3b1f_A Putative prephenate deh 80.1 6.7 0.00023 33.5 8.4 89 168-271 7-98 (290)
488 3h0g_L DNA-directed RNA polyme 80.0 1.1 3.7E-05 29.3 2.4 29 59-97 20-48 (63)
489 3tfo_A Putative 3-oxoacyl-(acy 79.8 7.1 0.00024 33.0 8.3 75 167-247 4-91 (264)
490 3h0g_I DNA-directed RNA polyme 79.7 1.1 3.8E-05 33.1 2.7 38 60-102 4-41 (113)
491 1pqv_S STP-alpha, transcriptio 79.7 0.59 2E-05 41.2 1.3 40 58-97 266-306 (309)
492 3d4o_A Dipicolinate synthase s 79.6 3.8 0.00013 35.4 6.6 90 165-274 153-244 (293)
493 3iei_A Leucine carboxyl methyl 79.6 26 0.0009 30.9 12.1 118 157-276 80-231 (334)
494 3v8b_A Putative dehydrogenase, 79.5 9.3 0.00032 32.6 9.0 76 166-247 27-115 (283)
495 3awd_A GOX2181, putative polyo 79.5 10 0.00035 31.4 9.2 76 166-247 12-100 (260)
496 1yb1_A 17-beta-hydroxysteroid 79.3 10 0.00035 31.9 9.2 76 166-247 30-118 (272)
497 4e21_A 6-phosphogluconate dehy 78.9 1.9 6.6E-05 38.6 4.6 92 167-274 22-115 (358)
498 3o38_A Short chain dehydrogena 78.7 10 0.00035 31.7 9.0 77 166-247 21-111 (266)
499 2g5c_A Prephenate dehydrogenas 78.4 7.5 0.00026 33.0 8.1 90 169-273 3-95 (281)
500 2jah_A Clavulanic acid dehydro 78.3 12 0.00042 30.9 9.3 76 166-247 6-94 (247)
No 1
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.85 E-value=5.8e-21 Score=168.34 Aligned_cols=177 Identities=24% Similarity=0.430 Sum_probs=124.8
Q ss_pred eeccCCCccchhcCCCCccccccccCceecCCCCccccCccceeeeecccCccCcccccccccccccChhhHHHHHHhHH
Q 021344 61 FSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISGLKDYTEVKPASTELFRSPFVSFLYERGWR 140 (314)
Q Consensus 61 l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~~~~y~~~~~~~~~~~~~~~~s~~~~~~w~ 140 (314)
|.||.|++.+.... ..++|.+|+.....++||++++.......... ....+.+. . +
T Consensus 3 ~~Cp~C~~~~~~~~-----------~~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~~--~~~~~~~~-------~----~ 58 (269)
T 1p91_A 3 FSCPLCHQPLSREK-----------NSYICPQRHQFDMAKEGYVNLLPVQHKRSRDP--GDSAEMMQ-------A----R 58 (269)
T ss_dssp BBCTTTCCBCEEET-----------TEEECTTCCEEEBCTTSCEECSCSSSSCSCCC--SSSHHHHH-------H----H
T ss_pred ccCCCCCccceeCC-----------CEEECCCCCcCCcCCCEEEEeecccccCCCCC--CCCHHHHH-------H----H
Confidence 78999999875533 57999999888888999999886533211100 00001110 0 1
Q ss_pred HhcccCCCCCc--hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCC
Q 021344 141 QNFNRSGFPGP--DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT 218 (314)
Q Consensus 141 ~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~ 218 (314)
..+...++..+ ....+.+...+. .++.+|||||||+|.++..+++..+..+++|+|+|+.+++.|+++.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------- 129 (269)
T 1p91_A 59 RAFLDAGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------- 129 (269)
T ss_dssp HHHHTTTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--------
T ss_pred HHHHhCCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--------
Confidence 12222222111 112233333332 4678999999999999999999854559999999999999998852
Q ss_pred CCeEEEEecCCCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 219 SNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 219 ~~v~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.++.++.+|+..+++++++||+|++.++. .+++++.++|||||++++.++..
T Consensus 130 ~~~~~~~~d~~~~~~~~~~fD~v~~~~~~-------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 130 PQVTFCVASSHRLPFSDTSMDAIIRIYAP-------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp TTSEEEECCTTSCSBCTTCEEEEEEESCC-------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred CCcEEEEcchhhCCCCCCceeEEEEeCCh-------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 56899999999999888999999987653 24899999999999999998654
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=1.7e-20 Score=164.46 Aligned_cols=128 Identities=25% Similarity=0.290 Sum_probs=105.9
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
+.+.++.+.+..+. +.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++ ..++.++++|+++
T Consensus 26 p~~l~~~l~~~~~~--~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~ 92 (257)
T 4hg2_A 26 PRALFRWLGEVAPA--RGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR---------HPRVTYAVAPAED 92 (257)
T ss_dssp CHHHHHHHHHHSSC--SSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC---------CTTEEEEECCTTC
T ss_pred HHHHHHHHHHhcCC--CCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh---------cCCceeehhhhhh
Confidence 46667777776543 57899999999999999999886 99999999999988764 3689999999999
Q ss_pred CCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccCCCCCccchHHHHHHH
Q 021344 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLREVM 293 (314)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~~~~~~~~~~l~~~~ 293 (314)
+|+++++||+|++..++||+ ++.++++++.|+|||||+|++..+.... ..+.....++...
T Consensus 93 ~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~-~~~~~~~~~~~~~ 153 (257)
T 4hg2_A 93 TGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLTR-VDPEVDAVVDRLY 153 (257)
T ss_dssp CCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCB-CCHHHHHHHHHHH
T ss_pred hcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCC-CCHHHHHHHHHHH
Confidence 99999999999999999776 6889999999999999999998876532 2344444444444
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.83 E-value=3.1e-20 Score=162.87 Aligned_cols=118 Identities=25% Similarity=0.394 Sum_probs=105.6
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~ 234 (314)
.+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++++...+. .++.++.+|+..+|++
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGH---QQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCC-CCCSC
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEecHHhCCCC
Confidence 44566667777889999999999999999999886 999999999999999999887652 5799999999999998
Q ss_pred CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+++||+|++..+++|++|+..+|+++.++|||||++++.++..
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 8999999999999999999999999999999999999987654
No 4
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.83 E-value=1.2e-19 Score=162.10 Aligned_cols=122 Identities=15% Similarity=0.161 Sum_probs=107.9
Q ss_pred HHHHHHHHh----ccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCC
Q 021344 154 EFKMAQEYF----KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (314)
Q Consensus 154 ~~~~l~~~l----~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 229 (314)
..+.+.+.+ ...++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.++++....+ ...++.++.+|+.
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~ 142 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAG--LADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHT--CTTTEEEEECCTT
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEEcCcc
Confidence 445666666 66778899999999999999999873 2399999999999999999988766 3468999999999
Q ss_pred CCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
.+|+++++||+|++..+++|++++..+++++.++|||||++++.++...
T Consensus 143 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 143 EIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp SCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred cCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 9999899999999999999999999999999999999999999987654
No 5
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.83 E-value=7.9e-20 Score=160.64 Aligned_cols=125 Identities=17% Similarity=0.266 Sum_probs=103.0
Q ss_pred CCchHHHHHHHHHhc--cCCCCeEEEEcCcccHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEE
Q 021344 149 PGPDEEFKMAQEYFK--SAQGGLLVDVSCGSGLFSRKFAKSG--TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224 (314)
Q Consensus 149 ~~~~~~~~~l~~~l~--~~~~~~iLDiGcG~G~~~~~l~~~~--~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~ 224 (314)
|...+..+.+..++. .+++.+|||+|||+|.++..+++.. ++.+|+|+|+|+.|++.|+++++..+ ...+++++
T Consensus 51 P~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~~ 128 (261)
T 4gek_A 51 PGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDVI 128 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEEe
Confidence 444444444443332 3568899999999999999999874 35699999999999999999998876 35689999
Q ss_pred EecCCCCCCCCCchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEeccc
Q 021344 225 RADVCRLPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 225 ~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++|+.++|++ .||+|++..+++|++++. .+|++++++|||||+|++.+...
T Consensus 129 ~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 129 EGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp ESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 9999998864 599999999999998664 68999999999999999988654
No 6
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.82 E-value=9.5e-21 Score=177.43 Aligned_cols=116 Identities=14% Similarity=0.185 Sum_probs=92.9
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++ +. ......+...+...+++
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~----~~-~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREK----GI-RVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTT----TC-CEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHc----CC-CcceeeechhhHhhccc
Confidence 445666667777788999999999999999999876 999999999999999874 10 00011122233444566
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++++||+|++.++++|++|+..+++++.++|||||++++.++.
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6789999999999999999999999999999999999998754
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.82 E-value=3.2e-19 Score=157.28 Aligned_cols=122 Identities=25% Similarity=0.368 Sum_probs=108.4
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+ ...++.++.+|+.++|+
T Consensus 49 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~ 125 (273)
T 3bus_A 49 LTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG--LANRVTFSYADAMDLPF 125 (273)
T ss_dssp HHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCS
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECccccCCC
Confidence 34566667777788999999999999999999875 4599999999999999999988766 34579999999999999
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++++||+|++..+++|++++..+++++.++|||||++++.++...
T Consensus 126 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 889999999999999999999999999999999999999987654
No 8
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.81 E-value=1.9e-19 Score=157.16 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=110.2
Q ss_pred CCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC
Q 021344 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (314)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~ 228 (314)
+......+.+.+.+...++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.++++++..+ ...++.++.+|+
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~v~~~~~d~ 95 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG--VSERVHFIHNDA 95 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECCh
Confidence 4445666777888888888999999999999999999875 3499999999999999999988766 345899999999
Q ss_pred CCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.++++ +++||+|++..+++|++++..+|+++.++|||||++++.++..
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred HhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 99887 7899999999999999999999999999999999999987643
No 9
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.81 E-value=6.2e-19 Score=152.78 Aligned_cols=117 Identities=18% Similarity=0.318 Sum_probs=106.3
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
..+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++++...+. .++.++.+|+..+++++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGV---ENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTC---CSEEEEECBTTBCCSCT
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCC---CCeEEEecccccCCCCC
Confidence 3556677778899999999999999999999886 999999999999999998887652 57999999999999988
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999999999999999999999999999999999999987654
No 10
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.80 E-value=3.8e-19 Score=151.12 Aligned_cols=120 Identities=27% Similarity=0.391 Sum_probs=105.8
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
...+.+.+.+...++ +|||+|||+|.++..+++. +..+++|+|+|+.+++.++++++..+ ...++.++.+|+.+++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~ 106 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN--LNDRIQIVQGDVHNIP 106 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECBTTBCS
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc--ccCceEEEEcCHHHCC
Confidence 445566666666555 9999999999999999998 44599999999999999999988876 3468999999999999
Q ss_pred CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++++||+|++..+++|++++..+++++.++|||||++++.+..
T Consensus 107 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 107 IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 88899999999999999999999999999999999999998744
No 11
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.80 E-value=3.8e-19 Score=151.70 Aligned_cols=122 Identities=13% Similarity=0.101 Sum_probs=103.7
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC--CCCCeEEEEecCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRL 231 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~~~v~~~~~d~~~l 231 (314)
..+.+.+.+...++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++...+.. ...++.++.+|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 17 RMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 445666677767788999999999999999999876679999999999999999988765420 012799999999887
Q ss_pred CCCCCchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEec
Q 021344 232 PFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+..+++||+|++..+++|++++ ..+++++.++|||||++++...
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 7777899999999999999977 7999999999999997777654
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.80 E-value=7e-19 Score=154.85 Aligned_cols=125 Identities=20% Similarity=0.303 Sum_probs=109.3
Q ss_pred CCchHHHHHHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEec
Q 021344 149 PGPDEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (314)
Q Consensus 149 ~~~~~~~~~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d 227 (314)
+........+...+. ..++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.++++++..+ ...+++++.+|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d 104 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG--LQNRVTGIVGS 104 (267)
T ss_dssp SCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECC
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC--CCcCcEEEEcC
Confidence 344555566666665 567889999999999999999998 45699999999999999999998876 34679999999
Q ss_pred CCCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+.++++++++||+|++..+++|+ ++..+++++.++|||||++++.++..
T Consensus 105 ~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 105 MDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp TTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeee
Confidence 99999888999999999999999 89999999999999999999998764
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.80 E-value=8.2e-19 Score=153.22 Aligned_cols=125 Identities=17% Similarity=0.265 Sum_probs=108.7
Q ss_pred CCchHHHHHHHHHh-ccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEec
Q 021344 149 PGPDEEFKMAQEYF-KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (314)
Q Consensus 149 ~~~~~~~~~l~~~l-~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d 227 (314)
+........+.+.+ ...++.+|||||||+|.++..+++.++. +|+|+|+|+.+++.+++++...+ ...+++++.+|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d 104 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKAN--CADRVKGITGS 104 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECC
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECC
Confidence 44455555666665 4556789999999999999999999753 99999999999999999998876 34569999999
Q ss_pred CCCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+..+|+++++||+|++..+++|+ ++..+++++.++|||||++++.++..
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred hhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 99999888999999999999999 89999999999999999999998653
No 14
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.80 E-value=3.8e-19 Score=151.65 Aligned_cols=119 Identities=17% Similarity=0.304 Sum_probs=107.0
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
.+.+.+...++.+|||+|||+|.++..+++.+ +..+++|+|+|+.+++.+++++...+. .++.++.+|+..+++++
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL---KNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECBTTBCSSCS
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEecccccCCCCC
Confidence 45556667778899999999999999999985 556999999999999999999887763 47999999999998888
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++||+|++..+++|++++..+++++.++|||||++++.++...
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 9999999999999999999999999999999999999987654
No 15
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.80 E-value=2.1e-19 Score=152.13 Aligned_cols=115 Identities=15% Similarity=0.167 Sum_probs=93.5
Q ss_pred HHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCC---------CCCCCeEEEEecCC
Q 021344 159 QEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT---------ILTSNLALVRADVC 229 (314)
Q Consensus 159 ~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~---------~~~~~v~~~~~d~~ 229 (314)
.+.+...++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|+++...... ....+++++++|+.
T Consensus 15 ~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 15 WSSLNVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp HHHHCCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred HHhcccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 3344555788999999999999999999976 999999999999999987643100 00257999999999
Q ss_pred CCCCCC-CchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEec
Q 021344 230 RLPFAS-GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 230 ~lp~~~-~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
++++.+ ++||+|++..+++|+++. ..+++++.++|||||++++.+.
T Consensus 93 ~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 93 ALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp SSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred cCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 998765 789999999999999754 4689999999999998554443
No 16
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.80 E-value=5.1e-19 Score=151.02 Aligned_cols=123 Identities=16% Similarity=0.181 Sum_probs=103.2
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC--CCCCeEEEEecCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRL 231 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~~~v~~~~~d~~~l 231 (314)
..+.+.+.+...++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++...+.. ...+++++.+|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 17 RLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 344666666666788999999999999999999886679999999999999999988765420 002899999999888
Q ss_pred CCCCCchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEecc
Q 021344 232 PFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++.+++||+|++..+++|++++ ..+++++.++|||||+++.....
T Consensus 97 ~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 97 DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 8878899999999999999977 69999999999999976665543
No 17
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.79 E-value=6.6e-19 Score=155.62 Aligned_cols=119 Identities=19% Similarity=0.355 Sum_probs=105.9
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
+.+.......++.+|||||||+|.++..+++.++..+++|+|+++.+++.+++++...+. .++.++.+|+..+++++
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~~~ 103 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI---KNVKFLQANIFSLPFED 103 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGCCSCT
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEcccccCCCCC
Confidence 344444445678899999999999999999997777999999999999999999887763 58999999999999888
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 104 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 104 SSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred CCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 999999999999999999999999999999999999987543
No 18
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.78 E-value=5e-19 Score=155.07 Aligned_cols=124 Identities=12% Similarity=0.148 Sum_probs=107.5
Q ss_pred CCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC
Q 021344 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (314)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~ 228 (314)
+......+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++.... .+++++.+|+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~ 111 (266)
T 3ujc_A 38 SGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDI 111 (266)
T ss_dssp TTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCT
T ss_pred cchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECcc
Confidence 3344556677777777788899999999999999999974 349999999999999999865431 5899999999
Q ss_pred CCCCCCCCchhhheecchhccC--CCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 229 CRLPFASGFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~--~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
.++++++++||+|++..+++|+ .++..+++++.++|||||++++.++...
T Consensus 112 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 9999888999999999999999 7889999999999999999999987654
No 19
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.5e-18 Score=153.83 Aligned_cols=123 Identities=20% Similarity=0.319 Sum_probs=105.9
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhc-CCCCCCCeEEEEecC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADV 228 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~v~~~~~d~ 228 (314)
+....+.+.++.. .++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|+++++.. + ...+++++++|+
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~v~~~~~d~ 98 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPD--TYKNVSFKISSS 98 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCT
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccC--CCCceEEEEcCH
Confidence 4556666666654 468899999999999999999754 5679999999999999999998875 2 247999999999
Q ss_pred CCCCCCC------CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 229 CRLPFAS------GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 229 ~~lp~~~------~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.++++.+ ++||+|++..++||+ ++..+++++.++|||||++++.++..
T Consensus 99 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 99 DDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp TCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9988877 899999999999999 99999999999999999999966553
No 20
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.78 E-value=2.8e-18 Score=148.54 Aligned_cols=103 Identities=14% Similarity=0.162 Sum_probs=93.1
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.++.+|||||||+|.++..+++.++ +++|+|+|+.+++.|+++.. .++.++.+|+.++ +++++||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK-------DGITYIHSRFEDA-QLPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcCCcccEEEEh
Confidence 4577999999999999999999887 89999999999999998642 2799999999877 467899999999
Q ss_pred chhccCCCHHHHHHHHH-hhcccCcEEEEEeccc
Q 021344 245 AALHCWPSPSNAVAEIS-RILRSGGVFVGTTFLR 277 (314)
Q Consensus 245 ~vl~h~~d~~~~l~~i~-r~LkpGG~l~i~~~~~ 277 (314)
++++|++|+..+|+++. ++|||||++++.++..
T Consensus 111 ~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 111 HVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp SCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred hHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 99999999999999999 9999999999998654
No 21
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.78 E-value=1.9e-18 Score=155.62 Aligned_cols=120 Identities=18% Similarity=0.167 Sum_probs=106.1
Q ss_pred HHHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC
Q 021344 156 KMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (314)
Q Consensus 156 ~~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~ 234 (314)
+.+.+.+. ..++.+|||||||+|.++..+++.. ..+|+|+|+++.+++.|+++++..+ ...+++++.+|+.++|++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELR--IDDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCCC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhcCCCC
Confidence 45666666 6678899999999999999999883 2399999999999999999998876 345899999999999988
Q ss_pred CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccCC
Q 021344 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
+++||+|++..+++|+ ++..+++++.++|||||++++.++....
T Consensus 183 ~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 183 KGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp TTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred CCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 8999999999999999 6999999999999999999999876654
No 22
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.78 E-value=1e-18 Score=152.45 Aligned_cols=114 Identities=18% Similarity=0.246 Sum_probs=101.5
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
..+.+.+...++.+|||||||+|.++..+++.+.. +++|+|+|+.+++.++++.. ..++.++.+|+..+++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCCT
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCCC
Confidence 34556666667899999999999999999998743 89999999999999998754 268999999999999888
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++||+|++..+++|+.++..+++++.++|||||++++.++.
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99999999999999999999999999999999999998644
No 23
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.78 E-value=1.9e-18 Score=148.87 Aligned_cols=121 Identities=17% Similarity=0.298 Sum_probs=104.0
Q ss_pred hHHHHHHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 152 DEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 152 ~~~~~~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
....+.+.+.+. ..++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.+++++... .++.++.+|+.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~ 103 (234)
T 3dtn_A 29 DDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-----LKVKYIEADYSK 103 (234)
T ss_dssp HHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-----TTEEEEESCTTT
T ss_pred HHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-----CCEEEEeCchhc
Confidence 344456666665 45678999999999999999999976779999999999999999976543 389999999999
Q ss_pred CCCCCCchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEecccC
Q 021344 231 LPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+++. ++||+|++..+++|++++. .+++++.++|||||++++.++...
T Consensus 104 ~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 104 YDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp CCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred cCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 8877 8999999999999998876 599999999999999999987653
No 24
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=1.3e-18 Score=148.14 Aligned_cols=114 Identities=15% Similarity=0.259 Sum_probs=99.6
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
..+...+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.... .+++++++|+.+++ ++
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC-CS
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC-CC
Confidence 3455566666778999999999999999999875 9999999999999999987642 48999999999888 57
Q ss_pred CchhhheecchhccCCCH---HHHHHHHHhhcccCcEEEEEeccc
Q 021344 236 GFVDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~---~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++||+|++..+++|++++ ..+++++.++|||||++++.++..
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 899999999999999998 467999999999999999987543
No 25
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.77 E-value=1.7e-18 Score=153.73 Aligned_cols=107 Identities=20% Similarity=0.288 Sum_probs=97.3
Q ss_pred CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-CCCCchhhheecc
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAGA 245 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-~~~~~fD~V~~~~ 245 (314)
+.+|||||||+|.++..+++.+. +++|+|+|+.+++.|++++...+ ...++.++.+|+.+++ +.+++||+|++..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKG--VSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-C--CGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 67999999999999999999865 99999999999999999988765 2368999999998887 7788999999999
Q ss_pred hhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 246 vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+++|++++..+++++.++|||||++++.++..
T Consensus 145 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 145 VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred hhhcccCHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 99999999999999999999999999988643
No 26
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.77 E-value=2.3e-18 Score=150.56 Aligned_cols=120 Identities=20% Similarity=0.225 Sum_probs=95.5
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh---------cCC-----CCCCC
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ---------DNT-----ILTSN 220 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---------~~~-----~~~~~ 220 (314)
.+.+...+...++.+|||+|||+|..+..|++.|. +|+|+|+|+.+++.|+++... .+. ....+
T Consensus 57 ~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 57 KKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp HHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred HHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 34444433334678999999999999999999986 999999999999999876531 000 01268
Q ss_pred eEEEEecCCCCCCCC-CchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEecc
Q 021344 221 LALVRADVCRLPFAS-GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 221 v~~~~~d~~~lp~~~-~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++++++|+.++++.+ ++||+|++..+++|++.. ..+++++.++|||||++++.+..
T Consensus 135 i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 135 ISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp EEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred eEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 999999999998764 799999999999999753 57999999999999999765543
No 27
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=1.7e-18 Score=152.04 Aligned_cols=115 Identities=23% Similarity=0.266 Sum_probs=101.7
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
...+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++ .++.++.+|+.+++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~---------~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVVH---------PQVEWFTGYAENLA 89 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCCC---------TTEEEECCCTTSCC
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHhc---------cCCEEEECchhhCC
Confidence 455677777777788999999999999999999865 4999999999999887652 38999999999999
Q ss_pred CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccCC
Q 021344 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
+++++||+|++.++++|++++..+++++.++|| ||++++.++....
T Consensus 90 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 988999999999999999999999999999999 9999988877543
No 28
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.77 E-value=4.7e-18 Score=152.33 Aligned_cols=118 Identities=16% Similarity=0.153 Sum_probs=103.0
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~ 234 (314)
.+.+.+.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++...+ ...+++++.+|+.++
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~--- 134 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD--SPRRKEVRIQGWEEF--- 134 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC--CSSCEEEEECCGGGC---
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECCHHHc---
Confidence 34566666777889999999999999999999832 499999999999999999998876 345899999999776
Q ss_pred CCchhhheecchhccCCCH---------HHHHHHHHhhcccCcEEEEEecccC
Q 021344 235 SGFVDAVHAGAALHCWPSP---------SNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~---------~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+++||+|++..+++|++|| ..+++++.++|||||++++.++...
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 6889999999999999877 7999999999999999999987654
No 29
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.77 E-value=2.2e-18 Score=149.07 Aligned_cols=114 Identities=26% Similarity=0.426 Sum_probs=100.9
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+.+. ++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++.. ..++.++.+|+..+++
T Consensus 43 ~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~ 112 (242)
T 3l8d_A 43 IIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERGE------GPDLSFIKGDLSSLPF 112 (242)
T ss_dssp HHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTTC------BTTEEEEECBTTBCSS
T ss_pred HHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhcc------cCCceEEEcchhcCCC
Confidence 4455555554 578999999999999999999865 99999999999999988641 3689999999999998
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++++||+|++.++++|++++..+++++.++|||||++++.++..
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 88999999999999999999999999999999999999998654
No 30
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=2.8e-18 Score=149.93 Aligned_cols=113 Identities=18% Similarity=0.179 Sum_probs=99.9
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
..+.+.+...++.+|||||||+|.++..+++..+..+++|+|+|+.+++.++++ ..++.++.+|+..++ ++
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~-~~ 93 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWK-PA 93 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCC-CS
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcC-cc
Confidence 345555666678899999999999999999985556999999999999999986 257899999999988 77
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++||+|++..+++|++++..+++++.++|||||++++.++..
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 899999999999999999999999999999999999998643
No 31
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.76 E-value=4.8e-18 Score=151.03 Aligned_cols=115 Identities=15% Similarity=0.192 Sum_probs=101.5
Q ss_pred HHHHHh-ccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC
Q 021344 157 MAQEYF-KSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (314)
Q Consensus 157 ~l~~~l-~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~ 234 (314)
.+.+.+ ...++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+++.+++++...+ .++.++.+|+.++++
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~- 86 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP----YDSEFLEGDATEIEL- 86 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS----SEEEEEESCTTTCCC-
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEcchhhcCc-
Confidence 444333 456788999999999999999999865 3699999999999999999987754 489999999999887
Q ss_pred CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++||+|++..+++|++++..+++++.++|||||++++.++.
T Consensus 87 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 468999999999999999999999999999999999998866
No 32
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.76 E-value=3e-18 Score=146.15 Aligned_cols=111 Identities=18% Similarity=0.252 Sum_probs=97.7
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.. .++.++.+|+.+++++ +
T Consensus 36 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~ 105 (220)
T 3hnr_A 36 DILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-T 105 (220)
T ss_dssp HHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-S
T ss_pred HHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-C
Confidence 444455555788999999999999999999865 99999999999999998642 3789999999999887 8
Q ss_pred chhhheecchhccCCCHHH--HHHHHHhhcccCcEEEEEeccc
Q 021344 237 FVDAVHAGAALHCWPSPSN--AVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~--~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+||+|++..+++|++++.. +++++.++|||||++++.++..
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 106 SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred CeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 9999999999999999987 9999999999999999998554
No 33
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.76 E-value=4.8e-18 Score=148.65 Aligned_cols=105 Identities=22% Similarity=0.343 Sum_probs=95.4
Q ss_pred ccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhe
Q 021344 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~ 242 (314)
...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++.. ...++.++.+|+..+++++++||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKIAG----VDRKVQVVQADARAIPLPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHTTT----SCTTEEEEESCTTSCCSCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhc----cCCceEEEEcccccCCCCCCCeeEEE
Confidence 345678999999999999999998864 999999999999999998722 23789999999999998889999999
Q ss_pred ecchhccCCCHHHHHHHHHhhcccCcEEEEE
Q 021344 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 243 ~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~ 273 (314)
+..+++|++|+..+++++.++|||||++++.
T Consensus 110 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 9999999999999999999999999999987
No 34
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.76 E-value=7.2e-18 Score=141.23 Aligned_cols=115 Identities=22% Similarity=0.239 Sum_probs=100.1
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++...+. .++.++.+|+..+++ ++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~-~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIENL---DNLHTRVVDLNNLTF-DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECCGGGCCC-CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCCC---CCcEEEEcchhhCCC-CC
Confidence 344555656778999999999999999999865 999999999999999998877652 479999999998887 78
Q ss_pred chhhheecchhccCC--CHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 237 FVDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~--d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+||+|++..+++|++ ++..+++++.++|||||++++.++..
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 999999999999998 78899999999999999988766543
No 35
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=2.1e-18 Score=145.41 Aligned_cols=102 Identities=15% Similarity=0.223 Sum_probs=94.1
Q ss_pred CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecch
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~v 246 (314)
+.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ ..++.++.+|+.++++++++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehhh
Confidence 78999999999999999999865 999999999999999985 25799999999999988899999999999
Q ss_pred hccCC--CHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 247 LHCWP--SPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 247 l~h~~--d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++|++ ++..+++++.++|||||++++.++...
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 99997 889999999999999999999987653
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.75 E-value=9.7e-18 Score=148.99 Aligned_cols=118 Identities=19% Similarity=0.194 Sum_probs=101.3
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~ 234 (314)
.+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+ ...++.++.+|+.++|
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSE--NLRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCC--CCSCEEEEESCGGGCC--
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCCCeEEEECChhhCC--
Confidence 3455566666778899999999999999998543 2399999999999999999988765 3468999999997765
Q ss_pred CCchhhheecchhccC--CCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 235 SGFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~--~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++||+|++..+++|+ .++..+++++.++|||||++++.++...
T Consensus 128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 789999999999999 6789999999999999999999887653
No 37
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.75 E-value=7.2e-18 Score=142.92 Aligned_cols=100 Identities=28% Similarity=0.342 Sum_probs=90.7
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecc
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~ 245 (314)
++.+|||+|||+|.++..+ + ..+++|+|+|+.+++.++++. .++.++.+|+.++++++++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~-~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---P-YPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALPFPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---C-CSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCCSCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC---C-CCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCCCCCCcEEEEEEcC
Confidence 6789999999999999887 2 228999999999999999853 478999999999998888999999999
Q ss_pred hhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 246 vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+++|++++..+++++.++|||||++++.++..
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 104 TLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 99999999999999999999999999998654
No 38
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.75 E-value=5e-18 Score=146.47 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=94.1
Q ss_pred CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecch
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~v 246 (314)
+.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++....+ ...++.++.+|+.+++ ++++||+|++..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~ 141 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSSP--KAEYFSFVKEDVFTWR-PTELFDLIFDYVF 141 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTSG--GGGGEEEECCCTTTCC-CSSCEEEEEEESS
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhccC--CCcceEEEECchhcCC-CCCCeeEEEEChh
Confidence 45999999999999999988655 89999999999999999887643 2357999999999877 4568999999999
Q ss_pred hccCC--CHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 247 LHCWP--SPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 247 l~h~~--d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++|++ ++..+++++.++|||||++++..+...
T Consensus 142 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 142 FCAIEPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp TTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred hhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 99999 888999999999999999999887553
No 39
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.74 E-value=5.5e-18 Score=150.95 Aligned_cols=124 Identities=21% Similarity=0.213 Sum_probs=105.3
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC-CCCCeEEEEecCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI-LTSNLALVRADVC 229 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~-~~~~v~~~~~d~~ 229 (314)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++....+.. ...++.+..+|+.
T Consensus 42 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 42 TAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 345566777777777788999999999999999999976 9999999999999999876443210 1246889999998
Q ss_pred CCC---CCCCchhhheec-chhccCCC-------HHHHHHHHHhhcccCcEEEEEecc
Q 021344 230 RLP---FASGFVDAVHAG-AALHCWPS-------PSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 230 ~lp---~~~~~fD~V~~~-~vl~h~~d-------~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.++ +.+++||+|++. .+++|+++ +..+++++.++|||||++++..+.
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 877 778899999998 89999999 899999999999999999998854
No 40
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.74 E-value=3.4e-18 Score=151.45 Aligned_cols=110 Identities=28% Similarity=0.436 Sum_probs=97.4
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++. .++.++.+|+..+++ ++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQNY--------PHLHFDVADARNFRV-DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTTCCC-SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhhC--------CCCEEEECChhhCCc-CC
Confidence 44556666678899999999999999999854 49999999999999998853 578899999999887 57
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+||+|++..+++|++|+..+++++.++|||||++++.++..
T Consensus 117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 89999999999999999999999999999999999988654
No 41
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.74 E-value=1.1e-17 Score=143.65 Aligned_cols=111 Identities=21% Similarity=0.333 Sum_probs=98.5
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC--CCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--LTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+.. ...++.++.+|+..+++++++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 578999999999999999999865 9999999999999999987765410 023689999999999988899999999
Q ss_pred cchhccCCCHH---HHHHHHHhhcccCcEEEEEecccC
Q 021344 244 GAALHCWPSPS---NAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 244 ~~vl~h~~d~~---~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
..+++|++++. .+++++.++|||||++++.++...
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 99999999998 899999999999999999987653
No 42
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=8.6e-18 Score=145.28 Aligned_cols=113 Identities=27% Similarity=0.357 Sum_probs=99.9
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+...++.+|||||||+|.++..+++.+. .+++|+|+|+.+++.++++... .++.++.+|+..++++++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~~ 106 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHLPQD 106 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCCCTT
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccCCCC
Confidence 566677766788999999999999999998853 3899999999999999986432 479999999998888888
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+||+|++..+++|++++..+++++.++|||||++++.++.
T Consensus 107 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 107 SFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 9999999999999999999999999999999999998754
No 43
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.74 E-value=9.6e-18 Score=141.75 Aligned_cols=109 Identities=21% Similarity=0.351 Sum_probs=94.6
Q ss_pred cCCCCeEEEEcCcccHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhe
Q 021344 164 SAQGGLLVDVSCGSGLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~-~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~ 242 (314)
..++.+|||+|||+|.+ ...++..+. +++|+|+|+.+++.++++....+ .++.++.+|+.++++++++||+|+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~ 94 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGY--KTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLPFKDESMSFVY 94 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTC--EEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCCSCTTCEEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCCCCCCceeEEE
Confidence 34578999999999997 455555444 99999999999999999887654 578999999999998888999999
Q ss_pred ecchhccC--CCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 243 AGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 243 ~~~vl~h~--~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+..+++|+ .++..+++++.++|||||++++.++...
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 99999999 5778999999999999999999987653
No 44
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.74 E-value=1.4e-17 Score=141.42 Aligned_cols=111 Identities=20% Similarity=0.224 Sum_probs=96.6
Q ss_pred HHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 157 MAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 157 ~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
.+.+.+. ..++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++ . ...++.++.+|+.++ +++
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~----~---~~~~~~~~~~d~~~~-~~~ 105 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGR----H---GLDNVEFRQQDLFDW-TPD 105 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGG----G---CCTTEEEEECCTTSC-CCS
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHh----c---CCCCeEEEecccccC-CCC
Confidence 3444443 45677999999999999999999965 99999999999999988 2 236899999999887 678
Q ss_pred CchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEeccc
Q 021344 236 GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++||+|++..+++|++++ ..+++++.++|||||++++.++..
T Consensus 106 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 899999999999999997 789999999999999999998765
No 45
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.73 E-value=2.5e-17 Score=145.69 Aligned_cols=140 Identities=11% Similarity=0.026 Sum_probs=107.2
Q ss_pred hhhHHHHHHhHHHhcccCC--------CCCchH---HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEe
Q 021344 129 PFVSFLYERGWRQNFNRSG--------FPGPDE---EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALD 197 (314)
Q Consensus 129 ~~~s~~~~~~w~~~~~~~~--------~~~~~~---~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD 197 (314)
......++..|.+.+.... ++..+. .++.....+...++.+|||||||+|.++..+..+.++.+|+|+|
T Consensus 74 ~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gID 153 (298)
T 3fpf_A 74 VNLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVE 153 (298)
T ss_dssp HHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEE
Confidence 3445567788888773322 222222 23333345677889999999999987765444443456999999
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 198 FSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 198 ~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++.+++.|+++++..+ . .+++++++|+.+++ +++||+|++... .+++.++++++.++|||||++++....
T Consensus 154 is~~~l~~Ar~~~~~~g--l-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 154 IEPDIAELSRKVIEGLG--V-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp SSHHHHHHHHHHHHHHT--C-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHhcC--C-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 99999999999998876 3 79999999998876 689999998654 578999999999999999999998743
No 46
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.73 E-value=2.5e-17 Score=148.62 Aligned_cols=117 Identities=15% Similarity=0.244 Sum_probs=101.9
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
.+.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++....+ ...++.++.+|+.+++
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASID--TNRSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCGGGCC-
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECChHHCC-
Confidence 345566666677889999999999999999988 54 99999999999999999988765 3457999999998775
Q ss_pred CCCchhhheecchhccC--CCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 234 ASGFVDAVHAGAALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~--~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++||+|++..+++|+ .++..+++++.++|||||++++.++...
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 689999999999999 5789999999999999999999987654
No 47
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.73 E-value=4.3e-18 Score=139.36 Aligned_cols=107 Identities=16% Similarity=0.304 Sum_probs=96.0
Q ss_pred HHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCch
Q 021344 159 QEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFV 238 (314)
Q Consensus 159 ~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~f 238 (314)
.+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ ..++.++.+| .++++++|
T Consensus 10 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d---~~~~~~~~ 76 (170)
T 3i9f_A 10 LPNIFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK--------FDSVITLSDP---KEIPDNSV 76 (170)
T ss_dssp HHHHHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH--------CTTSEEESSG---GGSCTTCE
T ss_pred HHhcCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---CCCCCCce
Confidence 3445566788999999999999999999885 999999999999999986 2689999999 67778899
Q ss_pred hhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
|+|++..+++|++++..+++++.++|||||++++.++...
T Consensus 77 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 77 DFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp EEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 9999999999999999999999999999999999988764
No 48
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.73 E-value=6.9e-18 Score=146.96 Aligned_cols=114 Identities=10% Similarity=0.017 Sum_probs=98.7
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+...++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.++++.... .++.++.+|+..++++++
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~~~ 157 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETATLPPN 157 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCCCSS
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCCCCCC
Confidence 44445555678899999999999999998886 448999999999999999976532 579999999998888888
Q ss_pred chhhheecchhccCC--CHHHHHHHHHhhcccCcEEEEEecc
Q 021344 237 FVDAVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~--d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+||+|++..+++|++ ++..+++++.++|||||++++.++.
T Consensus 158 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 999999999999995 4789999999999999999998863
No 49
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.73 E-value=4.1e-17 Score=143.85 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=103.2
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHH------HHHHHHHHHHhcCCCCCCCeEEEEec-
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSEN------MLRQCYDFIKQDNTILTSNLALVRAD- 227 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~------~~~~a~~~~~~~~~~~~~~v~~~~~d- 227 (314)
..+.+.+...++.+|||||||+|.++..+++. ++..+++|+|+|+. +++.+++++...+ ...+++++.+|
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP--LGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST--TGGGEEEECSCC
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC--CCCceEEEECCh
Confidence 35556666778899999999999999999988 45569999999997 8999999988765 23589999998
Q ss_pred --CCCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccCC
Q 021344 228 --VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 228 --~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
...+|+++++||+|++..+++|++++..+++.+.++++|||++++.++....
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 4566777889999999999999999999888888888889999999877643
No 50
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.73 E-value=1.8e-17 Score=141.72 Aligned_cols=112 Identities=27% Similarity=0.409 Sum_probs=97.5
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+. ++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.++++....+ .+++++.+|+.+++++++
T Consensus 31 ~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~ 102 (227)
T 1ve3_A 31 LLMKYMK--KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE----SNVEFIVGDARKLSFEDK 102 (227)
T ss_dssp HHHHSCC--SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCTTSCCSCTT
T ss_pred HHHHhcC--CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC----CCceEEECchhcCCCCCC
Confidence 4444443 378999999999999999999987 99999999999999999887754 689999999998888888
Q ss_pred chhhheecch--hccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 237 FVDAVHAGAA--LHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 237 ~fD~V~~~~v--l~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+||+|++..+ ++|..++..+++++.++|||||++++.++.
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9999999999 555567789999999999999999998865
No 51
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.73 E-value=1.3e-16 Score=134.70 Aligned_cols=121 Identities=19% Similarity=0.103 Sum_probs=103.2
Q ss_pred CchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCC
Q 021344 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (314)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 229 (314)
...+....+...+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.++++++..+. .+++++.+|+.
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~ 100 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA---RNVTLVEAFAP 100 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC---TTEEEEECCTT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeCChh
Confidence 344455667777888888999999999999999999998777999999999999999999887762 68999999996
Q ss_pred CCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+.....++||+|++..+++ ++..+++++.++|||||++++.+..
T Consensus 101 ~~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 101 EGLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TTCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hhhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 6543446899999988765 7889999999999999999998743
No 52
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.72 E-value=1.3e-17 Score=144.40 Aligned_cols=108 Identities=12% Similarity=0.167 Sum_probs=96.0
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecc
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~ 245 (314)
++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.+++++...+ ..++.++.+|+..+++.+++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 57899999999999999998886 4599999999999999999876642 2578999999988888888999999999
Q ss_pred hhccCCCHH--HHHHHHHhhcccCcEEEEEeccc
Q 021344 246 ALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 246 vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+++|++++. .+++++.++|||||++++.++..
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 999999865 89999999999999999988654
No 53
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.72 E-value=2.3e-17 Score=139.72 Aligned_cols=116 Identities=21% Similarity=0.295 Sum_probs=97.8
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+.+ .++.+|||+|||+|.++..+++.+.. +++|+|+|+.+++.++++... ..++.++.+|+..+++
T Consensus 32 ~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~~~ 103 (215)
T 2pxx_A 32 FRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKLDF 103 (215)
T ss_dssp HHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSCCS
T ss_pred HHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcCCC
Confidence 334444443 45789999999999999999998753 899999999999999997653 2579999999999888
Q ss_pred CCCchhhheecchhccCC---------------CHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 234 ASGFVDAVHAGAALHCWP---------------SPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~---------------d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++++||+|++..+++|+. ++..+++++.++|||||++++.++..
T Consensus 104 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 104 PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 888999999999887765 56789999999999999999999653
No 54
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.72 E-value=2.2e-17 Score=152.97 Aligned_cols=115 Identities=21% Similarity=0.278 Sum_probs=99.9
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhc-----CCCCCCCeEEEEecCCCC------
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQD-----NTILTSNLALVRADVCRL------ 231 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~-----~~~~~~~v~~~~~d~~~l------ 231 (314)
..++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|+++++.. +.....++.++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4568899999999999999998873 5669999999999999999987643 100226899999999987
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++++++||+|++..+++|++|+..+++++.++|||||++++.++...
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 88889999999999999999999999999999999999999876553
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.72 E-value=1.6e-17 Score=143.62 Aligned_cols=116 Identities=17% Similarity=0.202 Sum_probs=99.2
Q ss_pred HHHHHHHHhccC--CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 154 EFKMAQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 154 ~~~~l~~~l~~~--~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
..+.+.+.+... ++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++.+|+..+
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISNL 96 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGGC
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhcC----CCeEEEecccccC
Confidence 344555555443 678999999999999999999875 99999999999999999887754 3799999999888
Q ss_pred CCCCCchhhheecc-hhccC---CCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 232 PFASGFVDAVHAGA-ALHCW---PSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~-vl~h~---~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++ ++||+|++.. +++|+ .++..+++++.++|||||++++..+.
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred Ccc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 876 7899999998 99999 46678999999999999999997654
No 56
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.72 E-value=1.1e-17 Score=144.89 Aligned_cols=111 Identities=14% Similarity=0.253 Sum_probs=94.3
Q ss_pred HHHHHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-
Q 021344 154 EFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL- 231 (314)
Q Consensus 154 ~~~~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l- 231 (314)
..+.+...+. ..++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++ ++.++.+|+.+.
T Consensus 28 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~-----------~~~~~~~d~~~~~ 94 (240)
T 3dli_A 28 VKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEG-----------KFNVVKSDAIEYL 94 (240)
T ss_dssp HHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHT-----------TSEEECSCHHHHH
T ss_pred HHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHh-----------hcceeeccHHHHh
Confidence 3344444444 24568999999999999999999866 89999999999999986 278888888764
Q ss_pred -CCCCCchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEeccc
Q 021344 232 -PFASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 232 -p~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++++++||+|++..+++|++++ ..+++++.++|||||++++.++..
T Consensus 95 ~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 95 KSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp HTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred hhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 7788999999999999999966 899999999999999999998764
No 57
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.72 E-value=1.2e-17 Score=148.97 Aligned_cols=110 Identities=8% Similarity=0.035 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCcccHHHH----HHHHhCCCCeE--EEEeCCHHHHHHHHHHHHhcCCCCCCCeEE--EEecCCCCC----
Q 021344 165 AQGGLLVDVSCGSGLFSR----KFAKSGTYSGV--VALDFSENMLRQCYDFIKQDNTILTSNLAL--VRADVCRLP---- 232 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~----~l~~~~~~~~v--~giD~s~~~~~~a~~~~~~~~~~~~~~v~~--~~~d~~~lp---- 232 (314)
.++.+|||||||+|.++. .+...++...+ +|+|+|+.|++.|++++.... ...++.+ ..++++.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS--NLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS--SCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc--CCCcceEEEEecchhhhhhhhc
Confidence 456799999999997654 34444455544 999999999999999886532 1234544 445544333
Q ss_pred --CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++++||+|++.+++||++|+..+|++++++|||||++++....
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 45789999999999999999999999999999999999998754
No 58
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.72 E-value=2.1e-17 Score=148.37 Aligned_cols=112 Identities=16% Similarity=0.185 Sum_probs=98.7
Q ss_pred cCCCCeEEEEcCcccHHHHHHH-HhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhe
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFA-KSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~-~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~ 242 (314)
..++.+|||||||+|.++..++ ...+..+|+|+|+|+.+++.+++++...+ ...+++++++|+.+++++ ++||+|+
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~-~~fD~v~ 192 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA--LAGQITLHRQDAWKLDTR-EGYDLLT 192 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEECCGGGCCCC-SCEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECchhcCCcc-CCeEEEE
Confidence 3568899999999999999985 44556799999999999999999998766 235699999999998887 8999999
Q ss_pred ecchhccCCCHHH---HHHHHHhhcccCcEEEEEecccC
Q 021344 243 AGAALHCWPSPSN---AVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 243 ~~~vl~h~~d~~~---~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+..+++|++++.. +++++.++|||||++++.++...
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 9999999999986 79999999999999999887653
No 59
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.71 E-value=3.9e-17 Score=145.05 Aligned_cols=111 Identities=15% Similarity=0.169 Sum_probs=96.8
Q ss_pred HHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchh
Q 021344 160 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVD 239 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD 239 (314)
+.+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+ .+++++.+|+..+++ +++||
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~-~~~fD 186 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKEN----LNISTALYDINAANI-QENYD 186 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCGGGCCC-CSCEE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHcC----CceEEEEeccccccc-cCCcc
Confidence 344444688999999999999999999875 99999999999999999988765 389999999988776 78899
Q ss_pred hheecchhccCCCH--HHHHHHHHhhcccCcEEEEEeccc
Q 021344 240 AVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 240 ~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+|++..+++|++++ ..+++++.++|||||++++.....
T Consensus 187 ~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 187 FIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp EEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred EEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 99999999999765 489999999999999988766544
No 60
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.71 E-value=1.2e-17 Score=140.49 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=91.1
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecc
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~ 245 (314)
++ +|||||||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++.+|+..+++++++||+|++..
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDIVADAWEGIVSIF 102 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSCCTTTCSEEEEEC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCCCcCCccEEEEEh
Confidence 35 999999999999999998865 99999999999999999887765 489999999999888888999999854
Q ss_pred hhccC--CCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 246 ALHCW--PSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 246 vl~h~--~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
.|+ .++..+++++.++|||||++++.++...
T Consensus 103 --~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 103 --CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp --CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred --hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 455 3567899999999999999999987653
No 61
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.70 E-value=6.1e-17 Score=141.97 Aligned_cols=100 Identities=22% Similarity=0.289 Sum_probs=89.6
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecc
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~ 245 (314)
++.+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++. .++.++.+|+..+++ +++||+|++..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRN--------PDAVLHHGDMRDFSL-GRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTCCC-SCCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhC--------CCCEEEECChHHCCc-cCCcCEEEEcC
Confidence 468999999999999999999876 9999999999999999853 478999999999887 78999999998
Q ss_pred -hhccCC---CHHHHHHHHHhhcccCcEEEEEecc
Q 021344 246 -ALHCWP---SPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 246 -vl~h~~---d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++|++ +...+++++.++|||||++++..+.
T Consensus 119 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 119 SSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred chhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 999997 4558899999999999999997653
No 62
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.70 E-value=8.2e-17 Score=132.44 Aligned_cols=117 Identities=17% Similarity=0.191 Sum_probs=96.1
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-C
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-L 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-l 231 (314)
+....+.+.+...++.+|||+|||+|.++..+++..+..+++|+|+++.+++.+++++...+. ..++ ++.+|..+ +
T Consensus 12 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~-~~~~d~~~~~ 88 (178)
T 3hm2_A 12 HVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV--SDRI-AVQQGAPRAF 88 (178)
T ss_dssp HHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC--TTSE-EEECCTTGGG
T ss_pred HHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC--CCCE-EEecchHhhh
Confidence 344566667777788899999999999999999986667999999999999999999888762 3478 88888754 3
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+..+++||+|++..+++| ..+++++.++|||||++++.+..
T Consensus 89 ~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECS
T ss_pred hccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeec
Confidence 332278999999999988 67899999999999999998854
No 63
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.70 E-value=3.8e-17 Score=138.54 Aligned_cols=101 Identities=24% Similarity=0.284 Sum_probs=90.7
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecc
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~ 245 (314)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++. ++.++.+|+..++ .+++||+|++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-~~~~fD~v~~~~ 110 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD-AIDAYDAVWAHA 110 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC-CCSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC-CCCcEEEEEecC
Confidence 578999999999999999999865 9999999999999999864 4567889998888 678999999999
Q ss_pred hhccCC--CHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 246 ALHCWP--SPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 246 vl~h~~--d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+++|++ ++..+++++.++|||||++++......
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 111 CLLHVPRDELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 999998 778999999999999999999876543
No 64
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=1.1e-16 Score=133.42 Aligned_cols=122 Identities=17% Similarity=0.105 Sum_probs=99.3
Q ss_pred HHHHHHHHHhcc---CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCC
Q 021344 153 EEFKMAQEYFKS---AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (314)
Q Consensus 153 ~~~~~l~~~l~~---~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 229 (314)
...+.+.+.+.. .++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|+++++..+. .+++++++|+.
T Consensus 28 ~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~ 103 (189)
T 3p9n_A 28 RVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGL---SGATLRRGAVA 103 (189)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTC---SCEEEEESCHH
T ss_pred HHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCC---CceEEEEccHH
Confidence 334444444432 467899999999999999888765 45899999999999999999988762 68999999987
Q ss_pred CCC--CCCCchhhheecchhccC-CCHHHHHHHHHh--hcccCcEEEEEecccC
Q 021344 230 RLP--FASGFVDAVHAGAALHCW-PSPSNAVAEISR--ILRSGGVFVGTTFLRY 278 (314)
Q Consensus 230 ~lp--~~~~~fD~V~~~~vl~h~-~d~~~~l~~i~r--~LkpGG~l~i~~~~~~ 278 (314)
+++ +++++||+|++...+++. .+...+++++.+ +|||||++++......
T Consensus 104 ~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 104 AVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred HHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 753 346789999999887775 677889999999 9999999999886654
No 65
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.69 E-value=1.9e-16 Score=155.29 Aligned_cols=124 Identities=12% Similarity=0.149 Sum_probs=104.8
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCC---CCCCCeEEEEecC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNT---ILTSNLALVRADV 228 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~---~~~~~v~~~~~d~ 228 (314)
...+.+.+.+...++.+|||||||+|.++..+++.+ +..+|+|+|+|+.+++.|++++..... ....+++++++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 445667777776788999999999999999999987 345999999999999999997764210 0125899999999
Q ss_pred CCCCCCCCchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEeccc
Q 021344 229 CRLPFASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.++++.+++||+|++..+++|++++. .+++++.++|||| .+++.++..
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99999889999999999999999876 5899999999999 888887553
No 66
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.69 E-value=3.6e-17 Score=146.04 Aligned_cols=109 Identities=19% Similarity=0.218 Sum_probs=90.8
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC-----------------------------
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI----------------------------- 216 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~----------------------------- 216 (314)
++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999966679999999999999999876543210
Q ss_pred --------------------------CCCCeEEEEecCCCCC-----CCCCchhhheecchhccCC------CHHHHHHH
Q 021344 217 --------------------------LTSNLALVRADVCRLP-----FASGFVDAVHAGAALHCWP------SPSNAVAE 259 (314)
Q Consensus 217 --------------------------~~~~v~~~~~d~~~lp-----~~~~~fD~V~~~~vl~h~~------d~~~~l~~ 259 (314)
...++.++++|+...+ +.+++||+|++..+++|+. ++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0148999999997654 5678999999999998875 67789999
Q ss_pred HHhhcccCcEEEEEe
Q 021344 260 ISRILRSGGVFVGTT 274 (314)
Q Consensus 260 i~r~LkpGG~l~i~~ 274 (314)
+.++|||||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999975
No 67
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.69 E-value=6.7e-16 Score=130.57 Aligned_cols=116 Identities=16% Similarity=0.176 Sum_probs=96.3
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.+....+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++++..+. ..+++++.+|+.+.
T Consensus 41 ~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 41 SPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTGG
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhhh
Confidence 3444566777777788999999999999999999984 4999999999999999999888763 23899999999873
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
....++||+|++..++ ++. +++++.++|||||++++....
T Consensus 117 ~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 117 LADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp GTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred cccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 3234579999987654 566 999999999999999998843
No 68
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.69 E-value=1.2e-16 Score=140.04 Aligned_cols=109 Identities=28% Similarity=0.373 Sum_probs=92.9
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
+.+.+.+. ++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++.. . .++.+|+..+++++
T Consensus 46 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~~ 112 (260)
T 2avn_A 46 SFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFPS 112 (260)
T ss_dssp HHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCCC
Confidence 34444444 678999999999999999998865 99999999999999998642 1 28899999999888
Q ss_pred CchhhheecchhccC-CCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 236 GFVDAVHAGAALHCW-PSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~-~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++||+|++..+++|+ +++..+++++.++|||||++++.+++.
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 999999998876665 789999999999999999999988654
No 69
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.68 E-value=1.4e-16 Score=141.92 Aligned_cols=109 Identities=20% Similarity=0.245 Sum_probs=95.3
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-CCCchhhhee
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-ASGFVDAVHA 243 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-~~~~fD~V~~ 243 (314)
.++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.|++++...+ ...++.++.+|+..+++ .+++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMK--RRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSC--CSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CCccEEEEECCccccccCCCCCcCEEEE
Confidence 467899999999999999888875 4599999999999999999988765 23579999999998887 5789999999
Q ss_pred cchhcc----CCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 244 GAALHC----WPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 244 ~~vl~h----~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
..+++| ..++..+++++.++|||||++++.++.
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 999977 456789999999999999999998855
No 70
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.68 E-value=9.3e-16 Score=141.31 Aligned_cols=120 Identities=11% Similarity=0.118 Sum_probs=103.7
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
..+.+.++..+..+|||||||+|.++..+++.++..+++++|+ +.+++.|++++...+ ...+++++.+|+. .+++.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--l~~~v~~~~~d~~-~~~p~ 267 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG--LADRCEILPGDFF-ETIPD 267 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTT-TCCCS
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC--cCCceEEeccCCC-CCCCC
Confidence 3444555566778999999999999999999988889999999 999999999988765 3478999999998 45555
Q ss_pred CchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEecccCCC
Q 021344 236 GFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYTS 280 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~~~~ 280 (314)
+||+|++.+++||++++. ++|++++++|||||++++.+......
T Consensus 268 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~ 313 (369)
T 3gwz_A 268 -GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDER 313 (369)
T ss_dssp -SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSS
T ss_pred -CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 799999999999999886 79999999999999999988776543
No 71
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.68 E-value=3.9e-16 Score=138.04 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=95.9
Q ss_pred HHHHHhc-cCCCCeEEEEcCcc---cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 157 MAQEYFK-SAQGGLLVDVSCGS---GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 157 ~l~~~l~-~~~~~~iLDiGcG~---G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
.+.+.+. .....+|||||||+ |.++..+.+..+..+|+++|+|+.+++.|++++.. ..+++++.+|+.+.+
T Consensus 67 ~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 67 RGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHH
T ss_pred HHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCch
Confidence 3334444 33447999999999 99888887777777999999999999999998753 268999999997632
Q ss_pred -----------CCCCchhhheecchhccCCC--HHHHHHHHHhhcccCcEEEEEeccc
Q 021344 233 -----------FASGFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 233 -----------~~~~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+..++||+|++..+|||+++ +..+|+++.++|||||+|++.+...
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 22247999999999999998 8899999999999999999998765
No 72
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.68 E-value=8.2e-17 Score=144.34 Aligned_cols=111 Identities=15% Similarity=0.160 Sum_probs=86.5
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC---CCCeEEEEecCC------CC--CCC
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL---TSNLALVRADVC------RL--PFA 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~---~~~v~~~~~d~~------~l--p~~ 234 (314)
++.+|||||||+|..+..++..+ ..+|+|+|+|+.+++.|+++....+... ..++++.+.|+. .+ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 47899999999998666555544 3489999999999999999887654100 013678888872 22 345
Q ss_pred CCchhhheecchhccC---CCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 235 SGFVDAVHAGAALHCW---PSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~---~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+++||+|+|..++||+ .+...++++++++|||||++++.++..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 6899999999999886 355799999999999999999998754
No 73
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.68 E-value=1.1e-16 Score=143.11 Aligned_cols=123 Identities=16% Similarity=0.223 Sum_probs=99.1
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
......+.+.+... +.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++...+.....+++++++|+.++
T Consensus 69 ~~~~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 69 TSEAREFATRTGPV-SGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp HHHHHHHHHHHCCC-CSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred cHHHHHHHHhhCCC-CCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 34455566666553 44999999999999999999865 8999999999999999988764310015799999999998
Q ss_pred CCCCCchhhheec-chhccCCC--HHHHHHHHHhhcccCcEEEEEecccC
Q 021344 232 PFASGFVDAVHAG-AALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 232 p~~~~~fD~V~~~-~vl~h~~d--~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++ +++||+|++. .+++|+++ ...+|+++.++|||||+|++.++...
T Consensus 146 ~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 146 AL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp CC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred Cc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 87 6889988864 66777653 47899999999999999999987763
No 74
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.68 E-value=1.4e-16 Score=136.23 Aligned_cols=107 Identities=17% Similarity=0.259 Sum_probs=92.9
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC--CCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR--LPFA 234 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~--lp~~ 234 (314)
.+.+.+. .++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++ ...++.+|+.. .+++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~----------~~~~~~~d~~~~~~~~~ 90 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEK----------LDHVVLGDIETMDMPYE 90 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTT----------SSEEEESCTTTCCCCSC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHh----------CCcEEEcchhhcCCCCC
Confidence 3444454 567899999999999999999885 5999999999999999862 24788999876 6677
Q ss_pred CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++||+|++..+++|++++..+++++.++|||||++++.++.
T Consensus 91 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 789999999999999999999999999999999999998865
No 75
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=2.9e-17 Score=142.13 Aligned_cols=105 Identities=12% Similarity=0.221 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC--CCCCCchhhhe
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 242 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l--p~~~~~fD~V~ 242 (314)
.++++|||||||+|..+..+++..+ .+++|||+|+.+++.|+++....+ .++.++.+|+..+ ++++++||.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~----~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCC----CceEEEeehHHhhcccccccCCceEE
Confidence 4688999999999999999988764 489999999999999999888765 6889999987643 46678898886
Q ss_pred e-----cchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 243 A-----GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 243 ~-----~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
. ..+++|+.++..+++++.|+|||||+|++..
T Consensus 134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 4 6778899999999999999999999998765
No 76
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=4.5e-17 Score=140.70 Aligned_cols=107 Identities=13% Similarity=0.229 Sum_probs=88.9
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC--CCCCCchhhhe
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 242 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l--p~~~~~fD~V~ 242 (314)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.+++.|+++.+..+ .++.++.+|+.++ ++++++||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcC----CCeEEEecCHHHhhcccCCCceEEEE
Confidence 4678999999999999999977653 389999999999999999877654 6899999999887 88889999999
Q ss_pred e-cchh--c--cCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 243 A-GAAL--H--CWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 243 ~-~~vl--~--h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+ .+.+ + |..+...+++++.++|||||++++.++.
T Consensus 134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 9 4443 1 2223457899999999999999987654
No 77
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.67 E-value=4.4e-16 Score=131.81 Aligned_cols=114 Identities=18% Similarity=0.115 Sum_probs=98.9
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
......+.+.+...++.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++++..+. .+++++.+|+.+.
T Consensus 63 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 63 PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ--HVCSVERIKGLQWQARRRLKNLDL---HNVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEecCHHHHHHHHHHHHHcCC---CceEEEECCcccC
Confidence 34455677777778899999999999999999999854 999999999999999999988653 5799999999876
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+..+++||+|++..+++|+++ ++.++|||||++++....
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 666789999999999999976 578999999999998854
No 78
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.67 E-value=5.2e-16 Score=128.95 Aligned_cols=119 Identities=14% Similarity=0.218 Sum_probs=100.9
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCC--eEEEEecCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSN--LALVRADVCR 230 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~--v~~~~~d~~~ 230 (314)
...+.+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.+++++...+. .+ +.++.+|+.+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLNNL---DNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTC---TTSCEEEEECSTTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECchhc
Confidence 455677777777788899999999999999999884 4999999999999999999887652 34 9999999977
Q ss_pred CCCCCCchhhheecchhcc-CCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 231 LPFASGFVDAVHAGAALHC-WPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h-~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++.+++||+|++..+++| ..+...+++++.++|||||++++.++..
T Consensus 114 -~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 114 -NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp -TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred -ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 344678999999988877 3456789999999999999999998654
No 79
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=2.8e-16 Score=135.69 Aligned_cols=113 Identities=21% Similarity=0.294 Sum_probs=95.2
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+.+.. +.+|||+|||+|.++..+++. . +++|+|+|+.+++.|+++....+ .++.++.+|+.++++
T Consensus 23 ~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~-~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 23 WVAWVLEQVEP--GKRIADIGCGTGTATLLLADH-Y--EVTGVDLSEEMLEIAQEKAMETN----RHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT-S--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCGGGCCC
T ss_pred HHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC-C--eEEEEECCHHHHHHHHHhhhhcC----CceEEEEcChhhcCC
Confidence 33455555543 689999999999999999887 3 99999999999999999887654 679999999988876
Q ss_pred CCCchhhheecc-hhccCC---CHHHHHHHHHhhcccCcEEEEEecc
Q 021344 234 ASGFVDAVHAGA-ALHCWP---SPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 234 ~~~~fD~V~~~~-vl~h~~---d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+ ++||+|++.. +++|+. ++..+++++.++|||||++++..+.
T Consensus 94 ~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 94 P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 5 7899999986 999994 4568899999999999999986643
No 80
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=1e-16 Score=139.00 Aligned_cols=105 Identities=16% Similarity=0.109 Sum_probs=92.3
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC-----Cchh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS-----GFVD 239 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~-----~~fD 239 (314)
.++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.++++.. ..+++++++|+.+++... ..||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCcc
Confidence 4678999999999999999999987 99999999999999998762 258999999998865432 2489
Q ss_pred hheecchhccCC--CHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 240 AVHAGAALHCWP--SPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 240 ~V~~~~vl~h~~--d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+|++..+++|++ ++..+++++.++|||||++++.++..
T Consensus 127 ~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp EEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred EEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999999999999 78899999999999999999988754
No 81
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.66 E-value=7.6e-17 Score=141.71 Aligned_cols=113 Identities=20% Similarity=0.339 Sum_probs=87.5
Q ss_pred ccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC-------------------------
Q 021344 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL------------------------- 217 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~------------------------- 217 (314)
...++.+|||||||+|.+...++..+. .+|+|+|+|+.+++.|+++++......
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 344678999999999988777766653 379999999999999998775532000
Q ss_pred -CCCeE-EEEecCCCC-CC---CCCchhhheecchhccC-C---CHHHHHHHHHhhcccCcEEEEEecc
Q 021344 218 -TSNLA-LVRADVCRL-PF---ASGFVDAVHAGAALHCW-P---SPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 218 -~~~v~-~~~~d~~~l-p~---~~~~fD~V~~~~vl~h~-~---d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
..++. ++++|+.+. |+ ..++||+|+++.+|||+ + +...++++++++|||||+|++.+..
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 01243 889999873 43 25689999999999996 3 4468999999999999999998754
No 82
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.66 E-value=8.6e-16 Score=130.64 Aligned_cols=106 Identities=21% Similarity=0.261 Sum_probs=91.5
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC--CCCCchhhhee
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVHA 243 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp--~~~~~fD~V~~ 243 (314)
++.+|||||||+|.++..+++..++.+++|+|+++.+++.|++++...+. .++.++.+|+..++ +++++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV---PNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---SSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC---CCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 57799999999999999999998777999999999999999999888763 68999999998877 67789999998
Q ss_pred cchhccCC--------CHHHHHHHHHhhcccCcEEEEEe
Q 021344 244 GAALHCWP--------SPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 244 ~~vl~h~~--------d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.....+.. ....+++++.++|||||++++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 86543222 12579999999999999999987
No 83
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.66 E-value=4.4e-16 Score=141.38 Aligned_cols=112 Identities=19% Similarity=0.165 Sum_probs=97.6
Q ss_pred ccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhe
Q 021344 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~ 242 (314)
+..+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++++...+ ...+++++.+|+. .+++. +||+|+
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~-~~~p~-~~D~v~ 240 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG--LSGRAQVVVGSFF-DPLPA-GAGGYV 240 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTT-SCCCC-SCSEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC--cCcCeEEecCCCC-CCCCC-CCcEEE
Confidence 334567999999999999999999988889999999 999999999988765 3478999999997 45554 799999
Q ss_pred ecchhccCCCH--HHHHHHHHhhcccCcEEEEEecccCC
Q 021344 243 AGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 243 ~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
+.+++||++++ .++|++++++|||||++++.+.....
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 99999999987 78999999999999999998876543
No 84
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.66 E-value=7.5e-16 Score=133.98 Aligned_cols=108 Identities=25% Similarity=0.398 Sum_probs=90.7
Q ss_pred hccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhh
Q 021344 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 241 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V 241 (314)
....++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++....+ .++.++++|+.+++++ ++||+|
T Consensus 37 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~-~~fD~v 109 (252)
T 1wzn_A 37 DAKREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEIAFK-NEFDAV 109 (252)
T ss_dssp TCSSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGCCCC-SCEEEE
T ss_pred hcccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhcccC-CCccEE
Confidence 3345678999999999999999999865 99999999999999999987765 4799999999888764 689999
Q ss_pred eecc-hhccCC--CHHHHHHHHHhhcccCcEEEEEecc
Q 021344 242 HAGA-ALHCWP--SPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 242 ~~~~-vl~h~~--d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++.. +++|+. +...+++++.++|||||++++..+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 110 TMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 9864 455554 4568999999999999999987643
No 85
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.66 E-value=3.5e-16 Score=134.80 Aligned_cols=103 Identities=24% Similarity=0.352 Sum_probs=90.0
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee-
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA- 243 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~- 243 (314)
.++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.++++. .++.++.+|+..+++ +++||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL--------PDATLHQGDMRDFRL-GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTCCC-SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHccc-CCCCcEEEEc
Confidence 4578999999999999999999986 9999999999999999853 568999999998887 678999995
Q ss_pred cchhccCCCH---HHHHHHHHhhcccCcEEEEEecccC
Q 021344 244 GAALHCWPSP---SNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 244 ~~vl~h~~d~---~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
..+++|+.++ ..+++++.++|||||++++.++...
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 5599999654 6899999999999999999876543
No 86
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.66 E-value=3.3e-16 Score=133.63 Aligned_cols=95 Identities=21% Similarity=0.313 Sum_probs=87.3
Q ss_pred CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecch
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~v 246 (314)
+.+|||+|||+|.++..++.. +|+|+|+.+++.+++ .++.++.+|+..+++++++||+|++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~----------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARK----------RGVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHH----------TTCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHh----------cCCEEEEcccccCCCCCCCeeEEEEcch
Confidence 779999999999999888753 999999999999988 3688999999998888889999999999
Q ss_pred hccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 247 LHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 247 l~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++|++++..+++++.++|||||++++.++..
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 9999999999999999999999999988654
No 87
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.66 E-value=1.5e-15 Score=139.36 Aligned_cols=120 Identities=15% Similarity=0.129 Sum_probs=103.4
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~ 234 (314)
.+.+.+.++..++.+|||||||+|.++..+++..+..+++++|+ +.+++.++++++..+ ...+++++.+|+.+.+++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG--VADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CTTTEEEEECCTTTSCCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC--CCCCEEEEeCccccCCCC
Confidence 34555666666788999999999999999999988889999999 999999999988765 235699999999887765
Q ss_pred CCchhhheecchhccCCC--HHHHHHHHHhhcccCcEEEEEecccCC
Q 021344 235 SGFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
+. |+|++..++||+++ ...+|+++.++|||||++++.++....
T Consensus 256 ~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 256 EA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDD 300 (359)
T ss_dssp CC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCC
T ss_pred CC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCC
Confidence 43 99999999999988 678999999999999999998876543
No 88
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.66 E-value=9.5e-16 Score=140.96 Aligned_cols=110 Identities=14% Similarity=0.145 Sum_probs=96.8
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC--CCCCCchhhhe
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVH 242 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l--p~~~~~fD~V~ 242 (314)
....+|||||||+|.++..+++.++..+++++|+ +.+++.|++++...+ ...+++++.+|+.+. |++ ++||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~p-~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS--GSERIHGHGANLLDRDVPFP-TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT--TGGGEEEEECCCCSSSCCCC-CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC--cccceEEEEccccccCCCCC-CCcCEEE
Confidence 4568999999999999999999988889999999 999999999987765 236899999999875 465 6899999
Q ss_pred ecchhccCCCHH--HHHHHHHhhcccCcEEEEEecccC
Q 021344 243 AGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 243 ~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+.+++||++++. .+|++++++|||||++++.+....
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 999999998874 789999999999999999886554
No 89
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.66 E-value=1.3e-15 Score=138.20 Aligned_cols=120 Identities=14% Similarity=0.249 Sum_probs=101.9
Q ss_pred HHHHHHHhcc--CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 155 FKMAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 155 ~~~l~~~l~~--~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
...+.+.++. .++.+|||+|||+|.++..+++..+..+++++|++ .+++.+++++...+ ...+++++.+|+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG--VASRYHTIAGSAFEVD 228 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT--CGGGEEEEESCTTTSC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC--CCcceEEEecccccCC
Confidence 3344555555 67789999999999999999999777799999999 99999999887765 2357999999998877
Q ss_pred CCCCchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEecccC
Q 021344 233 FASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++++ ||+|++.+++||++++ ..+++++.++|||||++++.++...
T Consensus 229 ~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 229 YGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp CCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred CCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 6554 9999999999999766 6899999999999999999887654
No 90
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.66 E-value=3.9e-16 Score=129.45 Aligned_cols=109 Identities=18% Similarity=0.165 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-CCCCchhhhee
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHA 243 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-~~~~~fD~V~~ 243 (314)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++++..+. .++++++.+...++ +.+++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDLGI---ENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHHTC---CCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 467899999999999999999884 4999999999999999999988762 68999998877643 44678999987
Q ss_pred cc-hhcc--------CCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 244 GA-ALHC--------WPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 244 ~~-vl~h--------~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
.. .+++ ..+...+++++.++|||||++++..+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 63 2322 12335788999999999999999887643
No 91
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.66 E-value=2e-16 Score=134.89 Aligned_cols=110 Identities=19% Similarity=0.215 Sum_probs=92.9
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC---C
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---P 232 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l---p 232 (314)
..+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++ .++.+..+|+..+ +
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~ 110 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAK 110 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhcccc
Confidence 3455555556678999999999999999999865 999999999999999984 4567888887665 4
Q ss_pred CCC-CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 233 FAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 233 ~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+.. ++||+|++..+++ ..++..+++++.++|||||++++.++..
T Consensus 111 ~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 111 VPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp SCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 444 4599999999999 7899999999999999999999998755
No 92
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.65 E-value=1.2e-15 Score=140.49 Aligned_cols=115 Identities=14% Similarity=0.196 Sum_probs=99.0
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
..+.+.++..++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...+ ...+++++.+|+.+ +++.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~~ 247 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG--LADRVTVAEGDFFK-PLPV 247 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTS-CCSC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCC-cCCC
Confidence 3445555566788999999999999999999987789999999 999999999988765 33589999999875 4443
Q ss_pred CchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEec
Q 021344 236 GFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.||+|++.+++||++++. .+++++.++|||||++++.++
T Consensus 248 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 248 -TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 499999999999999885 899999999999999999886
No 93
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.65 E-value=5.2e-16 Score=132.13 Aligned_cols=106 Identities=18% Similarity=0.248 Sum_probs=89.6
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC--CCCCchhhhee
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--FASGFVDAVHA 243 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp--~~~~~fD~V~~ 243 (314)
++.+|||||||+|.++..+++..++.+++|+|+|+.+++.|++++...+. .++.++++|+..++ +++++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~---~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA---QNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC---SSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC---CCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 56799999999999999999997778999999999999999999887763 68999999998765 66788999987
Q ss_pred cchhccCCC--------HHHHHHHHHhhcccCcEEEEEe
Q 021344 244 GAALHCWPS--------PSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 244 ~~vl~h~~d--------~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.+...+... ...+++++.++|||||.+++.+
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 543322211 2578999999999999999987
No 94
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.65 E-value=9.9e-16 Score=127.37 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=90.7
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++. .++.++.+|+..+++++++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQISETDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSCCCCCCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCCCCCCceeEEEEC
Confidence 3678999999999999999999865 9999999999999999853 46899999999888878899999998
Q ss_pred -chhccCCC--HHHHHHHHHhhcccCcEEEEEeccc
Q 021344 245 -AALHCWPS--PSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 245 -~vl~h~~d--~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.+++|+.+ ...+++++.++|||||++++.....
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 78999854 4789999999999999999987553
No 95
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.65 E-value=1.2e-15 Score=139.41 Aligned_cols=120 Identities=13% Similarity=0.202 Sum_probs=101.8
Q ss_pred HHHHHhccCC-CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-CC
Q 021344 157 MAQEYFKSAQ-GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FA 234 (314)
Q Consensus 157 ~l~~~l~~~~-~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-~~ 234 (314)
.+.+.++..+ +.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...+ ...+++++.+|+.+.+ +.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD--LGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CGGGEEEEECCTTCGGGGT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC--CCCceEEEeCCcccCcccC
Confidence 3444555555 78999999999999999999988889999999 889999999888765 3457999999998865 13
Q ss_pred CCchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEecccCC
Q 021344 235 SGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
.++||+|++.+++||++++ ..+|+++.++|||||++++.+.....
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 4569999999999999877 78999999999999999998876543
No 96
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.64 E-value=2.3e-16 Score=134.82 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=89.5
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-C--CCCCchhhhe
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P--FASGFVDAVH 242 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l-p--~~~~~fD~V~ 242 (314)
++.+|||||||+|.++..+++..++.+|+|+|+|+.+++.|+++++..+. .++.++.+|+.++ + +++++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l---~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGL---SNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTC---SSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCC---CcEEEEECCHHHHHHHHcCCCChheEE
Confidence 56799999999999999999998878999999999999999999887763 6899999998773 3 6788999999
Q ss_pred ecchhccCCCH--------HHHHHHHHhhcccCcEEEEEe
Q 021344 243 AGAALHCWPSP--------SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 243 ~~~vl~h~~d~--------~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+.+...+.... ..+++++.++|||||++++.+
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 87543322211 258999999999999999988
No 97
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.64 E-value=1.5e-15 Score=137.88 Aligned_cols=119 Identities=16% Similarity=0.115 Sum_probs=100.3
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA 234 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~ 234 (314)
...+.+.++..+ .+|||||||+|.++..+++..+..+++++|+ +.+++.+++++...+ ...+++++.+|+.+ +++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEESCTTT-CCC
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEecCCCCC-CCC
Confidence 344555555555 8999999999999999999987789999999 999999999876543 23689999999977 554
Q ss_pred CCchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEecccCC
Q 021344 235 SGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
++||+|++.+++||++++. .+++++.++|||||++++.+.....
T Consensus 232 -~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp -SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred -CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 6799999999999998877 8999999999999999999876543
No 98
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.64 E-value=6.5e-16 Score=141.66 Aligned_cols=124 Identities=12% Similarity=0.115 Sum_probs=99.8
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH-------hcCCCCCCCeEEEE
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIK-------QDNTILTSNLALVR 225 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-------~~~~~~~~~v~~~~ 225 (314)
..+..+.+.+...++.+|||||||+|.++..++......+++|||+++.+++.|+++.+ ..+. ...++++++
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl-~~~rVefi~ 238 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGK-KHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTB-CCCEEEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCC-CCCCeEEEE
Confidence 34566677777888999999999999999999877544579999999999999987542 2221 126899999
Q ss_pred ecCCCCCCCC--CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 226 ADVCRLPFAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 226 ~d~~~lp~~~--~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+|+.++++.+ ..||+|+++..+ +.++....|.++.++|||||+|++.+....
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred CcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 9999988754 469999987765 457788899999999999999999876554
No 99
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.64 E-value=2.4e-16 Score=140.31 Aligned_cols=119 Identities=20% Similarity=0.268 Sum_probs=87.6
Q ss_pred HHHHHHhcc--CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC--------------C-C
Q 021344 156 KMAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--------------L-T 218 (314)
Q Consensus 156 ~~l~~~l~~--~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--------------~-~ 218 (314)
..+.+.+.. .++.+|||||||+|.+...++... ..+|+|+|+|+.+++.|+++++..... . .
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 344444433 367899999999999544344322 349999999999999999866432100 0 0
Q ss_pred ------------CCeEEEEecCCC-CCC-----CCCchhhheecchhcc----CCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 219 ------------SNLALVRADVCR-LPF-----ASGFVDAVHAGAALHC----WPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 219 ------------~~v~~~~~d~~~-lp~-----~~~~fD~V~~~~vl~h----~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..+.++.+|+.. +|+ ++++||+|++..+++| ++++..+|+++.++|||||+|++...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 015677889987 664 3467999999999999 66788999999999999999999753
No 100
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.63 E-value=1.1e-15 Score=133.70 Aligned_cols=110 Identities=14% Similarity=0.195 Sum_probs=88.9
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++... ++..++.+++.
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~ 101 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR---------CVTIDLLDITA 101 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS---------CCEEEECCTTS
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc---------cceeeeeeccc
Confidence 445666777777889999999999999999999876 9999999999999999976432 23344443332
Q ss_pred -----CCCchhhheecchhccCCC--HHHHHHHHHhhcccCcEEEEEec
Q 021344 234 -----ASGFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 -----~~~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.+++||+|++..+++|+.. ...+++++.++| |||+++++..
T Consensus 102 ~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 102 EIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 2568999999999999864 457999999999 9999999874
No 101
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.63 E-value=9.6e-16 Score=137.95 Aligned_cols=110 Identities=20% Similarity=0.260 Sum_probs=90.8
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCC----CCCCCeEEEEecCCCCC----CC--C
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT----ILTSNLALVRADVCRLP----FA--S 235 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~----~~~~~v~~~~~d~~~lp----~~--~ 235 (314)
++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.++++....+. ....++.++++|+..++ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 57899999999999999998753 45999999999999999998765310 00247999999998876 53 4
Q ss_pred CchhhheecchhccC-C---CHHHHHHHHHhhcccCcEEEEEecc
Q 021344 236 GFVDAVHAGAALHCW-P---SPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~-~---d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++||+|++..++||+ . ++..+++++.++|||||++++.++.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 589999999999988 3 3468999999999999999999864
No 102
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.63 E-value=9.8e-16 Score=132.42 Aligned_cols=111 Identities=19% Similarity=0.207 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc---CCCCCCCeEEEEecCCC-CC--CCCCch
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD---NTILTSNLALVRADVCR-LP--FASGFV 238 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~v~~~~~d~~~-lp--~~~~~f 238 (314)
.++.+|||||||+|.++..+++..++..++|+|+|+.+++.|+++++.. ......++.++++|+.. ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 3467899999999999999999987789999999999999999876531 00023689999999987 66 778899
Q ss_pred hhheecchhccCCC--------HHHHHHHHHhhcccCcEEEEEec
Q 021344 239 DAVHAGAALHCWPS--------PSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 239 D~V~~~~vl~h~~d--------~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
|.|++.+.-.|... ...+++++.++|||||.|++.+.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 99986543221110 03689999999999999999873
No 103
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.63 E-value=2.3e-16 Score=129.92 Aligned_cols=118 Identities=11% Similarity=0.065 Sum_probs=96.4
Q ss_pred CchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCC
Q 021344 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (314)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 229 (314)
..+.....+..++. +..+|||+|||+|.++..++...+..+|+++|+|+.+++.+++++...+. ..++.+ +|..
T Consensus 35 ~ld~fY~~~~~~l~--~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~--~~~v~~--~d~~ 108 (200)
T 3fzg_A 35 TLNDFYTYVFGNIK--HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT--TIKYRF--LNKE 108 (200)
T ss_dssp GHHHHHHHHHHHSC--CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC--SSEEEE--ECCH
T ss_pred hHHHHHHHHHhhcC--CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CccEEE--eccc
Confidence 34455556666664 37899999999999999999988888999999999999999999988762 235655 6664
Q ss_pred CCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.. .+.++||+|++..++||+.+.+..+.++.+.|||||+++-..
T Consensus 109 ~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 109 SD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred cc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 43 356789999999999999766778889999999999987765
No 104
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.63 E-value=1.6e-15 Score=138.14 Aligned_cols=112 Identities=22% Similarity=0.332 Sum_probs=96.2
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|+++++..+ ...+++++.+|+.++++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNK--LEDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTT--CTTTEEEEESCTTTSCCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcC--CCCcEEEEEeeHHHhcCCC
Confidence 345555556678899999999999999999886 45899999997 9999999988876 3468999999999998888
Q ss_pred Cchhhheecc---hhccCCCHHHHHHHHHhhcccCcEEE
Q 021344 236 GFVDAVHAGA---ALHCWPSPSNAVAEISRILRSGGVFV 271 (314)
Q Consensus 236 ~~fD~V~~~~---vl~h~~d~~~~l~~i~r~LkpGG~l~ 271 (314)
++||+|++.. .+.|..++..+++++.++|||||+++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 8999999865 57777788899999999999999997
No 105
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.63 E-value=1.3e-15 Score=131.95 Aligned_cols=103 Identities=17% Similarity=0.080 Sum_probs=89.6
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC---CCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---SGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~---~~~fD~V 241 (314)
.++.+|||||||+|.++..++...+..+|+|+|+|+.+++.++++.+..+. .+++++++|+.++++. +++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHHHhcccccccCCccEE
Confidence 467899999999999999999766667999999999999999999888763 4799999999877653 5789999
Q ss_pred eecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
++.. +.++..+++++.++|||||++++..
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 9876 4678999999999999999998864
No 106
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.63 E-value=6e-16 Score=131.83 Aligned_cols=110 Identities=24% Similarity=0.307 Sum_probs=88.2
Q ss_pred HhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH----hcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 161 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIK----QDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 161 ~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~----~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+...++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.+.+..+ ..+ ..++.++++|+.++|+.++
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~~ 98 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG---LPNLLYLWATAERLPPLSG 98 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC---CTTEEEEECCSTTCCSCCC
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC---CCceEEEecchhhCCCCCC
Confidence 444567889999999999999999999777799999999998886443332 222 3589999999999998766
Q ss_pred chhhhe---ecchh--ccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 237 FVDAVH---AGAAL--HCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 237 ~fD~V~---~~~vl--~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+ |.|+ ....+ +|++++..+++++.++|||||++++..
T Consensus 99 ~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp E-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred C-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 5 6555 33444 388999999999999999999999964
No 107
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.63 E-value=2.9e-15 Score=130.61 Aligned_cols=119 Identities=22% Similarity=0.329 Sum_probs=101.5
Q ss_pred CchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC
Q 021344 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (314)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~ 228 (314)
........+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++..+. ..+++++.+|+
T Consensus 77 ~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~ 154 (255)
T 3mb5_A 77 VHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLKDI 154 (255)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECSCG
T ss_pred ccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEECch
Confidence 34455567777888888999999999999999999998 6677999999999999999999988762 34599999999
Q ss_pred CCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.+. +++++||+|++ +.+++..+++++.++|||||++++..+.
T Consensus 155 ~~~-~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 155 YEG-IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp GGC-CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred hhc-cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 753 66778999987 4678889999999999999999998743
No 108
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.63 E-value=3.8e-15 Score=129.88 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=101.9
Q ss_pred CchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-CCCCCCCeEEEEec
Q 021344 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRAD 227 (314)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~v~~~~~d 227 (314)
........+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.++++++.. + ..++.++.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d 156 (258)
T 2pwy_A 80 TYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGK 156 (258)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESC
T ss_pred ccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECc
Confidence 33445566777777788899999999999999999998 65669999999999999999998775 4 2689999999
Q ss_pred CCCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+.+.++++++||+|++ +.+++..+++++.++|||||++++.++.
T Consensus 157 ~~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 157 LEEAELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp GGGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred hhhcCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 9887777789999997 4678889999999999999999998843
No 109
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.62 E-value=4.1e-15 Score=136.39 Aligned_cols=115 Identities=17% Similarity=0.317 Sum_probs=98.8
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.++..++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++...+ ...+++++.+|+.+ +++.
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~~~- 248 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG--LSDRVDVVEGDFFE-PLPR- 248 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT--CTTTEEEEECCTTS-CCSS-
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCC-CCCC-
Confidence 444555666788999999999999999999988889999999 999999999988765 23589999999875 3444
Q ss_pred chhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEecc
Q 021344 237 FVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.||+|++.+++||++++. .+++++.++|||||++++.++.
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 499999999999999874 8999999999999999998876
No 110
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.62 E-value=1.6e-15 Score=134.04 Aligned_cols=112 Identities=21% Similarity=0.222 Sum_probs=93.6
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-CCCCCCCeEEEEecCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.++++++.. + ..+++++.+|+.+ ++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~-~~ 175 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD-FI 175 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT-CC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc-cC
Confidence 45666677778899999999999999999987 55569999999999999999998875 4 2689999999987 66
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++++||+|++ |++++..+++++.++|||||++++.+..
T Consensus 176 ~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 176 SDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp CSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred cCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 6778999998 6788999999999999999999998843
No 111
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.62 E-value=2.1e-15 Score=129.80 Aligned_cols=102 Identities=14% Similarity=0.195 Sum_probs=87.0
Q ss_pred HhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC----CCCCCC
Q 021344 161 YFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR----LPFASG 236 (314)
Q Consensus 161 ~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~----lp~~~~ 236 (314)
.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.++++.+.. .++.++.+|+.. .++. +
T Consensus 69 ~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~-~ 142 (230)
T 1fbn_A 69 VMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-----ENIIPILGDANKPQEYANIV-E 142 (230)
T ss_dssp CCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-----TTEEEEECCTTCGGGGTTTS-C
T ss_pred ccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-----CCeEEEECCCCCcccccccC-c
Confidence 34455788999999999999999999854569999999999999999876542 689999999988 6665 7
Q ss_pred chhhheecchhccCCCH---HHHHHHHHhhcccCcEEEEE
Q 021344 237 FVDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~---~~~l~~i~r~LkpGG~l~i~ 273 (314)
+||+|+ ++++++ ..+++++.++|||||++++.
T Consensus 143 ~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 143 KVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 899998 556777 78899999999999999997
No 112
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.62 E-value=1.4e-15 Score=127.42 Aligned_cols=114 Identities=18% Similarity=0.256 Sum_probs=92.8
Q ss_pred ccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-CCCCchhh
Q 021344 163 KSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDA 240 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-~~~~~fD~ 240 (314)
...++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.|+++++..+ ...+++++++|+..++ +.+++||+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN--LIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT--CGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHhhhccCCceE
Confidence 3456789999999999999999987 345699999999999999999998865 2368999999988775 55688999
Q ss_pred heecchhc---------cCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 241 VHAGAALH---------CWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 241 V~~~~vl~---------h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
|++...+. +..+...+++++.++|||||++++..+...
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 143 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGG 143 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBT
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCC
Confidence 99876541 111345799999999999999999886543
No 113
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.62 E-value=8e-16 Score=129.75 Aligned_cols=121 Identities=11% Similarity=0.088 Sum_probs=94.4
Q ss_pred HHHHHHHHhccC-CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCC-CCeEEEEecCCCC
Q 021344 154 EFKMAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCRL 231 (314)
Q Consensus 154 ~~~~l~~~l~~~-~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~-~~v~~~~~d~~~l 231 (314)
..+.+.+.+... ++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|+++++..+. . .+++++.+|+.+.
T Consensus 40 ~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~v~~~~~d~~~~ 116 (201)
T 2ift_A 40 VKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKC--SSEQAEVINQSSLDF 116 (201)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTC--CTTTEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCC--CccceEEEECCHHHH
Confidence 333444444332 578999999999999998777763 4899999999999999999987652 1 5899999998664
Q ss_pred CC--CCCc-hhhheecchhccCCCHHHHHHHH--HhhcccCcEEEEEecccC
Q 021344 232 PF--ASGF-VDAVHAGAALHCWPSPSNAVAEI--SRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 232 p~--~~~~-fD~V~~~~vl~h~~d~~~~l~~i--~r~LkpGG~l~i~~~~~~ 278 (314)
.. .+++ ||+|++...++ ..+...+++.+ .++|||||++++......
T Consensus 117 ~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 117 LKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp TTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 32 3578 99999987744 56777889999 678999999999886554
No 114
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.62 E-value=3.7e-16 Score=136.73 Aligned_cols=111 Identities=18% Similarity=0.348 Sum_probs=90.7
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC--------------C------------C
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI--------------L------------T 218 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--------------~------------~ 218 (314)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.+++++...+.. . .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4567999999999999999888764 58999999999999999987643200 0 0
Q ss_pred CCe-EEEEecCCCCC-CCC---Cchhhheecchhc----cCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 219 SNL-ALVRADVCRLP-FAS---GFVDAVHAGAALH----CWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 219 ~~v-~~~~~d~~~lp-~~~---~~fD~V~~~~vl~----h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.++ .++.+|+.+.+ +.+ ++||+|++..+++ |+.++..+++++.++|||||++++.+..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 027 89999998754 345 7899999999999 6667889999999999999999998754
No 115
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.62 E-value=2.3e-15 Score=137.62 Aligned_cols=119 Identities=14% Similarity=0.155 Sum_probs=93.4
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.++..++.+|||||||+|.++..+++.++..+++++|++ .++. +++.+..+ ...+++++.+|+. .+++
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~--~~~~v~~~~~d~~-~~~p-- 246 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPD--VAGRWKVVEGDFL-REVP-- 246 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGG--GTTSEEEEECCTT-TCCC--
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccC--CCCCeEEEecCCC-CCCC--
Confidence 3445556667889999999999999999999888899999994 4444 22222222 2467999999996 3444
Q ss_pred chhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEecccCCCCCc
Q 021344 237 FVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLRYTSSTS 283 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~~~~~~~~ 283 (314)
+||+|++.+++||++|+ ..+|++++++|||||++++.+........+
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~ 295 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDA 295 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSC
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc
Confidence 79999999999999998 699999999999999999988765543333
No 116
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.61 E-value=2.3e-15 Score=137.61 Aligned_cols=108 Identities=16% Similarity=0.253 Sum_probs=92.7
Q ss_pred ccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhe
Q 021344 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~ 242 (314)
...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++..+ ...+++++.+|+.++++++++||+|+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s~-~l~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECSS-ISDYAVKIVKANK--LDHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcHH-HHHHHHHHHHHcC--CCCcEEEEECcHHHccCCCCceEEEE
Confidence 34568899999999999999999985 45999999995 9999999998876 34569999999999988889999999
Q ss_pred ecch---hccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 243 AGAA---LHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 243 ~~~v---l~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+..+ +.+..++..+++++.++|||||+++...
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 8654 5556888999999999999999987433
No 117
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.61 E-value=3e-15 Score=135.12 Aligned_cols=114 Identities=13% Similarity=0.130 Sum_probs=97.5
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.....+.+.+...++.+|||||||+|.++..+++.+. ..+|+|+|+|+.+++.|+++++..+. .+++++.+|+.+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~---~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI---ENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEECChhhc
Confidence 3455677777777899999999999999999998876 35799999999999999999987763 5699999999875
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+..+++||+|++..+++|+. +++.++|||||++++...
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred cccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 54567899999999999986 578899999999999764
No 118
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.61 E-value=2.9e-15 Score=127.22 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=81.5
Q ss_pred ccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC----CCCCCch
Q 021344 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL----PFASGFV 238 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l----p~~~~~f 238 (314)
...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+.+..+.. .++.++.+|+... ++. ++|
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~-~~f 127 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIV-EKV 127 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTC-CCE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccc-cce
Confidence 445788999999999999999998754559999999999887666655432 5788999998763 444 789
Q ss_pred hhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
|+|++.. .++ .+...+++++.++|||||++++..
T Consensus 128 D~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 128 DLIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEECC-CST-THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999872 222 233456999999999999999985
No 119
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.61 E-value=4.6e-15 Score=136.74 Aligned_cols=125 Identities=14% Similarity=0.110 Sum_probs=100.6
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.+...+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.++++++..+.....+++++.+|+.+
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 34445677788877777899999999999999999998777999999999999999999988763112368999999987
Q ss_pred CCCCCCchhhheecchhccCCC-----HHHHHHHHHhhcccCcEEEEEecc
Q 021344 231 LPFASGFVDAVHAGAALHCWPS-----PSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d-----~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++++++||+|+++..+++... ...+++++.++|||||++++....
T Consensus 287 -~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 287 -GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp -TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred -cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 556789999999988876322 236899999999999999998743
No 120
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.60 E-value=3.2e-15 Score=123.93 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=98.6
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.......+.+.+...++.+|||+|||+|.++..+++.+ .+++++|+++.+++.+++++...+ ...++.++.+|+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG--LGDNVTLMEGDAPE 93 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT--CCTTEEEEESCHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC--CCcceEEEecCHHH
Confidence 44555667777777788999999999999999999987 499999999999999999988765 23589999999865
Q ss_pred CCCCC-CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 231 LPFAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 231 lp~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++++ ++||+|++..+++| ...+++++.++|+|||++++.++.
T Consensus 94 -~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp -HHTTSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECB
T ss_pred -hcccCCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecC
Confidence 3333 58999999887754 588999999999999999998854
No 121
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=7e-15 Score=121.02 Aligned_cols=115 Identities=16% Similarity=0.210 Sum_probs=98.1
Q ss_pred CchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCC
Q 021344 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (314)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 229 (314)
......+.+.+.+...++.+|||+|||+|.++..+++. ..+++|+|+++.+++.++++++..+. .+++++.+|+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~d~~ 93 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKR--CKFVYAIDYLDGAIEVTKQNLAKFNI---KNCQIIKGRAE 93 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTT--SSEEEEEECSHHHHHHHHHHHHHTTC---CSEEEEESCHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEECCcc
Confidence 34455667777777778889999999999999999983 45999999999999999999987762 57999999987
Q ss_pred CCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 230 RLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 230 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+ ++++++||+|++..+ .++..+++++.++ |||.+++.++.
T Consensus 94 ~-~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 94 D-VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp H-HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred c-cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 7 666788999999888 6788999999998 99999998843
No 122
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.60 E-value=4.2e-15 Score=125.38 Aligned_cols=113 Identities=19% Similarity=0.187 Sum_probs=93.4
Q ss_pred HHHHHHHHhccC---CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 154 EFKMAQEYFKSA---QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 154 ~~~~l~~~l~~~---~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
..+.+.+.+... ++.+|||+|||+|.++..++...+..+++|+|+|+.+++.+++++...+. .++.++.+|+.+
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~ 126 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL---ENIEPVQSRVEE 126 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC---SSEEEEECCTTT
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCeEEEecchhh
Confidence 344455544332 37899999999999999999986667999999999999999999887652 459999999988
Q ss_pred CCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.+ +.++||+|++.. +.+...+++++.++|||||++++..
T Consensus 127 ~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 127 FP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 66 457899999754 3567899999999999999999976
No 123
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.60 E-value=9.7e-16 Score=126.16 Aligned_cols=121 Identities=16% Similarity=0.152 Sum_probs=94.6
Q ss_pred HHHHHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-C
Q 021344 154 EFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-L 231 (314)
Q Consensus 154 ~~~~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-l 231 (314)
..+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|+++++..+ ...++.++.+|+.+ +
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMTK--AENRFTLLKMEAERAI 94 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTTT--CGGGEEEECSCHHHHH
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcHHHhH
Confidence 3445555555 4567899999999999999999884 4599999999999999999998765 23479999999876 3
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHH--hhcccCcEEEEEecccC
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEIS--RILRSGGVFVGTTFLRY 278 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~--r~LkpGG~l~i~~~~~~ 278 (314)
+..+++||+|++...+++ .+....++.+. ++|||||++++......
T Consensus 95 ~~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHBCSCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhhcCCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 444567999999766432 34456777777 99999999999886654
No 124
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=4.9e-15 Score=125.79 Aligned_cols=116 Identities=16% Similarity=0.096 Sum_probs=95.5
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.....+.+.+...++.+|||||||+|.++..+++.+ +..+++++|+++.+++.+++++...+. .++.++.+|+...
T Consensus 64 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY---DNVIVIVGDGTLG 140 (215)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEESCGGGC
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCeEEEECCcccC
Confidence 344566667777788899999999999999999886 446999999999999999998887652 5699999998543
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
...+++||+|++..+++|++ +++.++|||||++++.....
T Consensus 141 ~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 22367899999999999986 48899999999999988543
No 125
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.60 E-value=3.8e-15 Score=127.81 Aligned_cols=108 Identities=15% Similarity=0.203 Sum_probs=91.2
Q ss_pred hccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC---CCCCCCc
Q 021344 162 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASGF 237 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~---lp~~~~~ 237 (314)
+..++|.+|||+|||+|.++..+++. |+..+|+|+|+++.+++.++++.+.. .|+..+.+|... .++..++
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEeccCccccccccce
Confidence 55789999999999999999999987 77789999999999999998876543 589999999865 3456678
Q ss_pred hhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+|+|++. +.|..++..+++++.++|||||++++....
T Consensus 148 vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~ 184 (233)
T 4df3_A 148 VDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKA 184 (233)
T ss_dssp EEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEec
Confidence 9998863 556667889999999999999999987533
No 126
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.60 E-value=2.5e-15 Score=126.76 Aligned_cols=122 Identities=10% Similarity=0.088 Sum_probs=96.4
Q ss_pred hHHHHHHHHHhccC-CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 152 DEEFKMAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 152 ~~~~~~l~~~l~~~-~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
+...+.+.+.+... ++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|+++++..+. .+++++++|+.+
T Consensus 39 ~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~D~~~ 114 (202)
T 2fpo_A 39 DRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKA---GNARVVNSNAMS 114 (202)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEECCHHH
Confidence 34444555555432 578999999999999998777763 4899999999999999999988762 689999999876
Q ss_pred -CCCCCCchhhheecchhccCCCHHHHHHHHHh--hcccCcEEEEEecccC
Q 021344 231 -LPFASGFVDAVHAGAALHCWPSPSNAVAEISR--ILRSGGVFVGTTFLRY 278 (314)
Q Consensus 231 -lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r--~LkpGG~l~i~~~~~~ 278 (314)
++..+++||+|++...+ |..+...+++.+.+ +|||||++++......
T Consensus 115 ~~~~~~~~fD~V~~~~p~-~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 115 FLAQKGTPHNIVFVDPPF-RRGLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp HHSSCCCCEEEEEECCSS-STTTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred HHhhcCCCCCEEEECCCC-CCCcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 45556789999997764 35677888999876 5999999999886543
No 127
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.60 E-value=3.7e-15 Score=137.55 Aligned_cols=105 Identities=18% Similarity=0.232 Sum_probs=93.5
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++...+ .+++++.+|+.+.+..+++||+|+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~~----~~v~~~~~D~~~~~~~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEANA----LKAQALHSDVDEALTEEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTTSCTTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcC----CCeEEEEcchhhccccCCCeEEEEEC
Confidence 3577999999999999999999865 99999999999999999998876 45899999999887666899999999
Q ss_pred chhcc-----CCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 245 AALHC-----WPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 245 ~vl~h-----~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..+++ ..+...+++++.++|||||++++...
T Consensus 306 pp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 88888 44567899999999999999999873
No 128
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.60 E-value=2.6e-15 Score=124.39 Aligned_cols=126 Identities=15% Similarity=0.137 Sum_probs=98.5
Q ss_pred CCchHHHHHHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEec
Q 021344 149 PGPDEEFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (314)
Q Consensus 149 ~~~~~~~~~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d 227 (314)
+..+...+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++...+ ...+++++.+|
T Consensus 26 p~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d 102 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITK--EPEKFEVRKMD 102 (187)
T ss_dssp CCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESC
T ss_pred cCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhC--CCcceEEEECc
Confidence 334455556666664 3467899999999999999888865 4599999999999999999988765 23579999999
Q ss_pred CCCCC----CCCCchhhheecchhccCCCHHHHHHHH--HhhcccCcEEEEEecccC
Q 021344 228 VCRLP----FASGFVDAVHAGAALHCWPSPSNAVAEI--SRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 228 ~~~lp----~~~~~fD~V~~~~vl~h~~d~~~~l~~i--~r~LkpGG~l~i~~~~~~ 278 (314)
+.+.. ..+++||+|++...++ ..+....++.+ .++|||||++++......
T Consensus 103 ~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 103 ANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 86632 2367899999987744 45677788888 889999999999886654
No 129
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.60 E-value=6.7e-15 Score=126.34 Aligned_cols=112 Identities=15% Similarity=0.139 Sum_probs=94.2
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
.....+.+.+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.+++++... .++.++.+|+....
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVD--KVVSVEINEKMYNYASKLLSYY-----NNIKLILGDGTLGY 129 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTC-----SSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcC--EEEEEeCCHHHHHHHHHHHhhc-----CCeEEEECCccccc
Confidence 4455667777777888999999999999999999874 9999999999999999987653 27999999987633
Q ss_pred CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
..+++||+|++..+++|+. +++.++|||||++++.....
T Consensus 130 ~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 130 EEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred ccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 3467899999999999986 46889999999999987543
No 130
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=3.8e-15 Score=125.57 Aligned_cols=104 Identities=17% Similarity=0.199 Sum_probs=89.5
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.|++++...+. .+++++.+|+.+.+ +++||+|++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~--~~~fD~i~~~ 132 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALNGI---YDIALQKTSLLADV--DGKFDLIVAN 132 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC---CCCEEEESSTTTTC--CSCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEeccccccC--CCCceEEEEC
Confidence 457899999999999999998864 45999999999999999999887762 34999999997643 5789999999
Q ss_pred chhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 245 ~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.+++++ ..+++++.++|||||++++.++..
T Consensus 133 ~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 133 ILAEIL---LDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp SCHHHH---HHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred CcHHHH---HHHHHHHHHhcCCCCEEEEEecCc
Confidence 888874 788999999999999999987543
No 131
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.59 E-value=4.1e-15 Score=128.18 Aligned_cols=121 Identities=11% Similarity=0.186 Sum_probs=98.7
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
......+...+...++.+|||||||+|.++..+++..+..+|+++|+++.+++.|+++++..+ ...+++++.+|+.+.
T Consensus 57 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 57 RLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH--FENQVRIIEGNALEQ 134 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHH
Confidence 344556666666667889999999999999999997667799999999999999999998876 335899999999663
Q ss_pred -C-CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 232 -P-FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 232 -p-~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+ ..+++||+|++... ..+...+++++.++|||||++++.....
T Consensus 135 ~~~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 135 FENVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp HHHHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred HHhhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 3 33678999997654 4456789999999999999999866544
No 132
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.59 E-value=1.8e-15 Score=129.34 Aligned_cols=123 Identities=10% Similarity=0.178 Sum_probs=97.9
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
......+...+...++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|+++++..+ ...+++++.+|+.+
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 44 DAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG--LQDKVTILNGASQD 121 (221)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC--CCCceEEEECCHHH
Confidence 3344555555555678899999999999999999863 35699999999999999999998876 23579999999754
Q ss_pred -CCCCC-----CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 231 -LPFAS-----GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 231 -lp~~~-----~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++... ++||+|++....++..+...++..+ ++|||||++++.+...
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 33222 6899999998888876666778888 9999999999877553
No 133
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.59 E-value=8.2e-15 Score=129.52 Aligned_cols=120 Identities=17% Similarity=0.207 Sum_probs=100.8
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhc-CCCCCCCeEEEEecC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADV 228 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~v~~~~~d~ 228 (314)
.......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++.. +. ...++.++.+|+
T Consensus 84 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~-~~~~v~~~~~d~ 162 (280)
T 1i9g_A 84 YPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ-PPDNWRLVVSDL 162 (280)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS-CCTTEEEECSCG
T ss_pred cHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCCcEEEEECch
Confidence 3445566777777778899999999999999999985 55569999999999999999988765 20 126899999999
Q ss_pred CCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 229 CRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 229 ~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.+.++++++||+|++ +++++..+++++.++|||||++++.++.
T Consensus 163 ~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 163 ADSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp GGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred HhcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 888777789999997 5678889999999999999999998853
No 134
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.59 E-value=1.1e-15 Score=124.69 Aligned_cols=120 Identities=16% Similarity=0.188 Sum_probs=94.1
Q ss_pred chHHHHHHHHHhccC--CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC
Q 021344 151 PDEEFKMAQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~--~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~ 228 (314)
.....+.+.+.+... ++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.+++++...+ .+++++++|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~ 97 (171)
T 1ws6_A 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTG----LGARVVALPV 97 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHT----CCCEEECSCH
T ss_pred HHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcC----CceEEEeccH
Confidence 344444555555432 678999999999999999999987 69999999999999999988765 2899999998
Q ss_pred CCC-C-CC--CCchhhheecchhccCCCHHHHHHHHH--hhcccCcEEEEEecccC
Q 021344 229 CRL-P-FA--SGFVDAVHAGAALHCWPSPSNAVAEIS--RILRSGGVFVGTTFLRY 278 (314)
Q Consensus 229 ~~l-p-~~--~~~fD~V~~~~vl~h~~d~~~~l~~i~--r~LkpGG~l~i~~~~~~ 278 (314)
.+. + .. .++||+|++..+++ .+...+++.+. ++|||||++++.+....
T Consensus 98 ~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 98 EVFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred HHHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 662 2 11 24799999987765 55667777777 99999999999886543
No 135
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.59 E-value=1.5e-14 Score=125.87 Aligned_cols=121 Identities=12% Similarity=0.143 Sum_probs=96.1
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
......+.......++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++..+ ...+++++.+|+.+
T Consensus 49 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG--VDQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHH
Confidence 33444455454556788999999999999999999854 5699999999999999999998876 34589999999865
Q ss_pred -CCCC--CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 231 -LPFA--SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 231 -lp~~--~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++.. .++||+|++... ..+...+++++.++|||||++++.....
T Consensus 127 ~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp HHHTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred HHHhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 3322 348999998654 3345688999999999999999977654
No 136
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.58 E-value=2.1e-14 Score=123.10 Aligned_cols=108 Identities=18% Similarity=0.183 Sum_probs=88.2
Q ss_pred cCCCCeEEEEcCc-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-CCCCCchhhh
Q 021344 164 SAQGGLLVDVSCG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVDAV 241 (314)
Q Consensus 164 ~~~~~~iLDiGcG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l-p~~~~~fD~V 241 (314)
..++.+|||+||| +|.++..+++.. ..+|+|+|+++.+++.|++++...+ .+++++.+|+..+ ++++++||+|
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN----SNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT----CCCEEEECSSCSSTTTCCSCEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC----CCcEEEeCCchhhhhcccCceeEE
Confidence 3468899999999 999999999984 3499999999999999999998876 3899999997433 4556899999
Q ss_pred eecchhccCCC-------------------HHHHHHHHHhhcccCcEEEEEecc
Q 021344 242 HAGAALHCWPS-------------------PSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 242 ~~~~vl~h~~d-------------------~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++-.+++..+ ...+++++.++|||||++++....
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 99866554433 378899999999999999997743
No 137
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.58 E-value=9.4e-15 Score=132.47 Aligned_cols=112 Identities=18% Similarity=0.288 Sum_probs=93.6
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|++ .+++.|+++++..+ ...+++++.+|+.+++++++
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~~~ 104 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNG--FSDKITLLRGKLEDVHLPFP 104 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTT--CTTTEEEEESCTTTSCCSSS
T ss_pred HHHhhHhhcCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcC--CCCCEEEEECchhhccCCCC
Confidence 34344444567899999999999999999875 3589999999 58999999988876 34679999999999888778
Q ss_pred chhhheecc---hhccCCCHHHHHHHHHhhcccCcEEEE
Q 021344 237 FVDAVHAGA---ALHCWPSPSNAVAEISRILRSGGVFVG 272 (314)
Q Consensus 237 ~fD~V~~~~---vl~h~~d~~~~l~~i~r~LkpGG~l~i 272 (314)
+||+|++.. .+.+..++..++.++.++|||||+++.
T Consensus 105 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 999999864 455667788999999999999999973
No 138
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.58 E-value=8.2e-15 Score=127.38 Aligned_cols=102 Identities=20% Similarity=0.367 Sum_probs=86.3
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--------CCCCCCCeEEEEecCCC-CC--C
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--------NTILTSNLALVRADVCR-LP--F 233 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~~~~~~v~~~~~d~~~-lp--~ 233 (314)
.++.+|||||||+|.++..+++.++..+++|+|+|+.+++.++++++.. +. .++.++.+|+.+ ++ +
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~---~nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF---QNINVLRGNAMKFLPNFF 124 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT---TTEEEEECCTTSCGGGTS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC---CcEEEEeccHHHHHHHhc
Confidence 3567899999999999999999987779999999999999999987764 32 589999999986 55 6
Q ss_pred CCCchhhheecchhccCCCH-------------HHHHHHHHhhcccCcEEEEEe
Q 021344 234 ASGFVDAVHAGAALHCWPSP-------------SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~-------------~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.++++|.|+.. ++++ ..+++++.++|||||+|++.+
T Consensus 125 ~~~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 125 EKGQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CTTCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 67788888743 4555 479999999999999999976
No 139
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.58 E-value=2.9e-15 Score=136.69 Aligned_cols=119 Identities=18% Similarity=0.240 Sum_probs=100.2
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
+...+.+.+.+...++.+|||+|||+|.++..+++.++..+++++|+|+.+++.+++++...+ ..+.++.+|+...
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~----~~~~~~~~d~~~~ 257 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG----VEGEVFASNVFSE 257 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTT
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCCEEEEcccccc
Confidence 445667777776556789999999999999999999877799999999999999999998765 3467889998765
Q ss_pred CCCCCchhhheecchhcc-----CCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 232 PFASGFVDAVHAGAALHC-----WPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h-----~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+ +++||+|+++.++|+ ..+...+++++.++|||||.+++....
T Consensus 258 ~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 258 V--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp C--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred c--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 4 678999999988875 345678999999999999999998753
No 140
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.58 E-value=3.5e-15 Score=127.96 Aligned_cols=91 Identities=14% Similarity=0.277 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC-CCCCCC-CCchhhhe
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLPFA-SGFVDAVH 242 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~-~~lp~~-~~~fD~V~ 242 (314)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++ ..+++++++|+ ..+|++ +++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARAN--------APHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccCCcCCCCEEEEE
Confidence 4578999999999999999999865 999999999999999986 25799999999 568887 88999999
Q ss_pred ecchhccCCCHHHHHHHHHhhcccCcEEE
Q 021344 243 AGAALHCWPSPSNAVAEISRILRSGGVFV 271 (314)
Q Consensus 243 ~~~vl~h~~d~~~~l~~i~r~LkpGG~l~ 271 (314)
+. .++..+++++.++|||||+++
T Consensus 117 ~~------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 117 SR------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EE------SCCSGGGGGHHHHEEEEEEEE
T ss_pred eC------CCHHHHHHHHHHHcCCCcEEE
Confidence 87 467888999999999999998
No 141
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.57 E-value=1.7e-14 Score=124.18 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=100.4
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.......+...+...++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|+++++..+ ...++.++.+|+..
T Consensus 39 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 116 (233)
T 2gpy_A 39 DLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG--LESRIELLFGDALQ 116 (233)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCGGG
T ss_pred CHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHH
Confidence 3444556666666667889999999999999999998766799999999999999999998776 23579999999876
Q ss_pred C-CCC--CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 231 L-PFA--SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 231 l-p~~--~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
. +.. +++||+|++....+ +...+++++.++|||||++++.+...
T Consensus 117 ~~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 117 LGEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp SHHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred HHHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 4 433 57899999987754 67899999999999999999986543
No 142
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.57 E-value=1.4e-14 Score=128.05 Aligned_cols=118 Identities=14% Similarity=0.175 Sum_probs=95.7
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
+...+.+.+.+. .++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.++++++..+. .++.++++|+..
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~~- 170 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWFS- 170 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTTG-
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchhh-
Confidence 334555666655 467799999999999999999886677999999999999999999887763 479999999876
Q ss_pred CCCCCchhhheec-------------chhccCC------------CHHHHHHHHHhhcccCcEEEEEe
Q 021344 232 PFASGFVDAVHAG-------------AALHCWP------------SPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 232 p~~~~~fD~V~~~-------------~vl~h~~------------d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
++++++||+|+++ .+++|.+ +...+++++.++|||||++++..
T Consensus 171 ~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 171 ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3446789999997 4555543 34678999999999999999975
No 143
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.57 E-value=1.6e-16 Score=137.48 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=96.0
Q ss_pred HHHHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 155 FKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 155 ~~~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
.+.+...+. ..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++++..+ ...+++++++|+.+++
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~- 140 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGM--RVIAIDIDPVKIALARNNAEVYG--IADKIEFICGDFLLLA- 140 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHG-
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcC--CCcCeEEEECChHHhc-
Confidence 344444332 23688999999999999999999874 99999999999999999998876 2258999999998776
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.+++||+|++..+++|..++...+.++.++|||||++++..
T Consensus 141 ~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 141 SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 56789999999999998888778888999999999977654
No 144
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.57 E-value=1.6e-14 Score=127.67 Aligned_cols=116 Identities=20% Similarity=0.285 Sum_probs=99.1
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++..+ ...++.++.+|+.+
T Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 175 (277)
T 1o54_A 98 PKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG--LIERVTIKVRDISE 175 (277)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT--CGGGEEEECCCGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHH
Confidence 344566777778888899999999999999999998 666799999999999999999988765 23579999999876
Q ss_pred CCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 231 LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
. +++++||+|++ +.+++..+++++.++|||||++++.+.
T Consensus 176 ~-~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 176 G-FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp C-CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred c-ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5 55678999997 457888999999999999999999884
No 145
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.57 E-value=7.4e-15 Score=120.47 Aligned_cols=106 Identities=15% Similarity=0.178 Sum_probs=87.7
Q ss_pred HHHHHHHHhcc--CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 154 EFKMAQEYFKS--AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 154 ~~~~l~~~l~~--~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
..+.+.+.+.. .++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. . .+++++++|+.+
T Consensus 9 ~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~--------~----~~~~~~~~d~~~- 72 (170)
T 3q87_B 9 DTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES--------H----RGGNLVRADLLC- 72 (170)
T ss_dssp HHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT--------C----SSSCEEECSTTT-
T ss_pred cHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc--------c----cCCeEEECChhh-
Confidence 33344444544 567899999999999999999987 99999999999887 1 578999999987
Q ss_pred CCCCCchhhheecchhccCCCH---------HHHHHHHHhhcccCcEEEEEecc
Q 021344 232 PFASGFVDAVHAGAALHCWPSP---------SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~---------~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++.+++||+|+++..+++..+. ..+++++.+.| |||++++....
T Consensus 73 ~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 73 SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 6667899999999888877665 57889999999 99999998854
No 146
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.57 E-value=5.6e-15 Score=129.41 Aligned_cols=115 Identities=11% Similarity=0.248 Sum_probs=93.3
Q ss_pred HHHHHhccC-CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC--C
Q 021344 157 MAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--F 233 (314)
Q Consensus 157 ~l~~~l~~~-~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp--~ 233 (314)
.+..++... ++.+|||+|||+|.++..+++.++. +|+|+|+++.+++.|++++...+ ...++.++++|+.+.+ +
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~--~~~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQ--LEDQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTT--CTTTEEEECSCGGGGGGTS
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCC--CcccEEEEECcHHHhhhhh
Confidence 455566666 7889999999999999999998754 99999999999999999998876 3457999999998765 4
Q ss_pred CCCchhhheecchhccC-----C---------------CHHHHHHHHHhhcccCcEEEEEe
Q 021344 234 ASGFVDAVHAGAALHCW-----P---------------SPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~-----~---------------d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
++++||+|+++-.+.+. . +...+++.+.++|||||++++..
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 57899999996443222 1 23578999999999999999965
No 147
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.57 E-value=8.6e-15 Score=129.03 Aligned_cols=109 Identities=13% Similarity=0.199 Sum_probs=85.1
Q ss_pred CCCeEEEEcCcccH----HHHHHHHh-CC---CCeEEEEeCCHHHHHHHHHHHHhc----------------------C-
Q 021344 166 QGGLLVDVSCGSGL----FSRKFAKS-GT---YSGVVALDFSENMLRQCYDFIKQD----------------------N- 214 (314)
Q Consensus 166 ~~~~iLDiGcG~G~----~~~~l~~~-~~---~~~v~giD~s~~~~~~a~~~~~~~----------------------~- 214 (314)
++.+|||+|||+|. ++..+++. +. +.+|+|+|+|+.+++.|++..... +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35689999999998 55556655 21 248999999999999999864100 0
Q ss_pred -C----CCCCCeEEEEecCCCCCCC-CCchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEe
Q 021344 215 -T----ILTSNLALVRADVCRLPFA-SGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 215 -~----~~~~~v~~~~~d~~~lp~~-~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~ 274 (314)
. ....++.|.++|+.+.|++ .++||+|+|.+|++|+.++ .+++++++++|||||+|++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 0 0003699999999886665 5789999999999999876 689999999999999998843
No 148
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.57 E-value=5.5e-15 Score=128.81 Aligned_cols=103 Identities=13% Similarity=0.019 Sum_probs=90.0
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC---CCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA---SGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~---~~~fD~V 241 (314)
.++.+|||||||+|..+..++...+..+|+++|+++.+++.++++++..+. .+++++++|+++++.. +++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l---~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL---KGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---CceEEEECcHHHhhcccccCCCceEE
Confidence 457899999999999999999887778999999999999999999988763 5699999999876643 4789999
Q ss_pred eecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
++..+ .+...+++.+.++|||||++++..
T Consensus 156 ~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 156 VARAV----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EEESS----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EECCc----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 98653 577899999999999999998866
No 149
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.57 E-value=9.4e-15 Score=134.89 Aligned_cols=114 Identities=18% Similarity=0.231 Sum_probs=94.6
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.....++.+|||||||+|.++..+++.+. .+|+|+|+| .+++.|+++++..+ ...+++++.+|+.+++++ +
T Consensus 54 ~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~-~ 128 (376)
T 3r0q_C 54 AVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKANN--LDHIVEVIEGSVEDISLP-E 128 (376)
T ss_dssp HHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHTT--CTTTEEEEESCGGGCCCS-S
T ss_pred HHHhccccCCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHcC--CCCeEEEEECchhhcCcC-C
Confidence 444445556788999999999999999999863 499999999 99999999998877 346799999999988876 7
Q ss_pred chhhheecchhcc---CCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 237 FVDAVHAGAALHC---WPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 237 ~fD~V~~~~vl~h---~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+||+|++..+.++ -.++..+++++.++|||||++++...
T Consensus 129 ~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 129 KVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp CEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred cceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 8999999554333 35688899999999999999987554
No 150
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.57 E-value=1.2e-14 Score=125.41 Aligned_cols=114 Identities=14% Similarity=0.140 Sum_probs=94.3
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
.....+.+.+...++.+|||||||+|.++..+++.++ .+|+++|+++.+++.|++++...+. .++.++.+|+ ..+
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~-~~~ 152 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGV---KNVHVILGDG-SKG 152 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCG-GGC
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCC---CCcEEEECCc-ccC
Confidence 3445666677777888999999999999999999874 5999999999999999999887652 5699999997 334
Q ss_pred CCCC-chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 233 FASG-FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 233 ~~~~-~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++++ +||+|++..+++++. +++.++|||||++++.....
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 4443 499999999999885 37889999999999988543
No 151
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.56 E-value=7.5e-15 Score=135.36 Aligned_cols=109 Identities=18% Similarity=0.206 Sum_probs=92.6
Q ss_pred HHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 157 MAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 157 ~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
.+.+.++ ..++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++ ..+++++.+|+.+ +++.
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CCCC
Confidence 3344443 45678999999999999999999988889999999 888877764 2579999999987 6654
Q ss_pred CchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEecccC
Q 021344 236 GFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
||+|++.+++||++++. .+|++++++|||||++++.+....
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 99999999999999988 999999999999999999876654
No 152
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.56 E-value=1.5e-14 Score=134.91 Aligned_cols=123 Identities=11% Similarity=0.025 Sum_probs=96.8
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHH-------HHHHHhcCCCCCCCeEEEE
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQC-------YDFIKQDNTILTSNLALVR 225 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a-------~~~~~~~~~~~~~~v~~~~ 225 (314)
..+..+.+.+...++.+|||||||+|.++..+++..+..+|+|+|+++.+++.| +++++..+. ...+++++.
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl-~~~nV~~i~ 307 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGM-RLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB-CCCCEEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC-CCCceEEEE
Confidence 445566677777788999999999999999999975445899999999999988 887776551 026899999
Q ss_pred ecCCCC--CC--CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 226 ADVCRL--PF--ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 226 ~d~~~l--p~--~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+|.... ++ ..++||+|+++.++ +.+++...|+++.++|||||++++.....
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 865432 22 24689999987666 45677888999999999999999975443
No 153
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.56 E-value=2.2e-14 Score=132.05 Aligned_cols=109 Identities=15% Similarity=0.220 Sum_probs=91.6
Q ss_pred HHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 158 AQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 158 l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
+.+.++ ..+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++ ..+++++.+|+.+ +++++
T Consensus 194 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p~~ 262 (368)
T 3reo_A 194 ILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GVPKG 262 (368)
T ss_dssp HHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCCC
T ss_pred HHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CCCCC
Confidence 333343 45578999999999999999999998889999999 888877653 2689999999986 66654
Q ss_pred chhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEecccCC
Q 021344 237 FVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
|+|++.+++||+++.. ++|++++++|||||++++.+.....
T Consensus 263 --D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 263 --DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp --SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred --CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999999998875 7899999999999999998876543
No 154
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.55 E-value=2.2e-14 Score=127.09 Aligned_cols=111 Identities=15% Similarity=0.184 Sum_probs=93.0
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+ .++.+|||+|||+|.++..+++.+.. +|+|+|+|+.+++.|+++++..+. ..+++++++|+.+++. ++
T Consensus 118 ~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~--~~~v~~~~~D~~~~~~-~~ 191 (278)
T 2frn_A 118 RMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFPG-EN 191 (278)
T ss_dssp HHHHHC--CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCCC-CS
T ss_pred HHHHhC--CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECCHHHhcc-cC
Confidence 444443 34789999999999999999999864 799999999999999999988763 3469999999998776 67
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+||+|++... .+...+++++.++|||||++++.+...
T Consensus 192 ~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 192 IADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 8999998533 445688999999999999999988765
No 155
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=1.5e-14 Score=126.82 Aligned_cols=116 Identities=14% Similarity=0.124 Sum_probs=93.8
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh---cCCCCCCCeEEEEecCCCC--
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ---DNTILTSNLALVRADVCRL-- 231 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---~~~~~~~~v~~~~~d~~~l-- 231 (314)
++..++...++.+|||+|||+|.++..++++.+..+++|+|+++.+++.|++++.. .+ ...++.++++|+.+.
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~--l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA--FSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT--TGGGEEEEECCTTCCHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC--CcceEEEEeCCHHHHhh
Confidence 44556666677899999999999999999998767999999999999999999876 55 234699999999876
Q ss_pred -----CCCCCchhhheecchhcc------------------CCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 232 -----PFASGFVDAVHAGAALHC------------------WPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 232 -----p~~~~~fD~V~~~~vl~h------------------~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
++++++||+|+++-.+.. ..+...+++.+.++|||||++++..
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 255788999999722211 1246788999999999999999876
No 156
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.55 E-value=7.6e-16 Score=130.19 Aligned_cols=115 Identities=18% Similarity=0.123 Sum_probs=72.9
Q ss_pred HHHHHHHhcc-CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 155 FKMAQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 155 ~~~l~~~l~~-~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
.+.+.+.+.. .++.+|||+|||+|.++..+++.++..+++|+|+++.+++.+++++...+ .+++++++|+.+ ++
T Consensus 18 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~~~-~~ 92 (215)
T 4dzr_A 18 VEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG----AVVDWAAADGIE-WL 92 (215)
T ss_dssp HHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHH-HH
T ss_pred HHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC----CceEEEEcchHh-hh
Confidence 3455555554 56889999999999999999999777799999999999999999887654 278899999876 55
Q ss_pred CC-----Cchhhheecchh------ccCCCH--------------------HHHHHHHHhhcccCcEEEEEe
Q 021344 234 AS-----GFVDAVHAGAAL------HCWPSP--------------------SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 234 ~~-----~~fD~V~~~~vl------~h~~d~--------------------~~~l~~i~r~LkpGG~l~i~~ 274 (314)
++ ++||+|+++..+ +|+... ..+++++.++|||||++++..
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 55 899999995433 332221 678899999999999944444
No 157
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.55 E-value=3.9e-14 Score=130.18 Aligned_cols=110 Identities=20% Similarity=0.220 Sum_probs=92.4
Q ss_pred HHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 157 MAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 157 ~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
.+.+.++ ..+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++ ..+++++.+|+.+ |++.
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p~ 259 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVPS 259 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCCC
Confidence 3444444 55678999999999999999999988889999999 888776653 2689999999987 7765
Q ss_pred CchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEecccCC
Q 021344 236 GFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
+ |+|++.+++||+++.. ++|++++++|||||++++.+.....
T Consensus 260 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 260 G--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp C--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred C--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 4 9999999999998764 8899999999999999998876543
No 158
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.55 E-value=1.5e-14 Score=123.87 Aligned_cols=107 Identities=14% Similarity=0.144 Sum_probs=88.1
Q ss_pred CCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCC-CCeEEEEecCCCC-C-CCCCchhhh
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILT-SNLALVRADVCRL-P-FASGFVDAV 241 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~-~~v~~~~~d~~~l-p-~~~~~fD~V 241 (314)
++.+|||||||+|..+..+++.. ++.+|+++|+++.+++.|+++++..+ .. .+++++.+|+.+. + +.+++||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 34499999999999999999864 36799999999999999999999876 33 5899999998653 2 336789999
Q ss_pred eecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++.... .+...+++++.++|||||++++.....
T Consensus 134 ~~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 134 FGQVSP---MDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp EECCCT---TTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred EEcCcH---HHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 987543 456778999999999999999966554
No 159
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.55 E-value=2e-14 Score=125.67 Aligned_cols=118 Identities=18% Similarity=0.084 Sum_probs=90.7
Q ss_pred HHHHHhcc-CCCCeEEEEcCcc---cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 157 MAQEYFKS-AQGGLLVDVSCGS---GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 157 ~l~~~l~~-~~~~~iLDiGcG~---G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
.+..++.. ....+|||||||+ |.....+....+..+|+++|.|+.|++.|++++...+ ..++.++++|+.+.+
T Consensus 68 rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 68 RAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEADMLDPA 144 (277)
T ss_dssp HHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEECCTTCHH
T ss_pred HHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEecccChh
Confidence 33444443 2346899999997 3444444445677899999999999999999886532 257999999998752
Q ss_pred ------CCCCchh-----hheecchhccCCC---HHHHHHHHHhhcccCcEEEEEeccc
Q 021344 233 ------FASGFVD-----AVHAGAALHCWPS---PSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 233 ------~~~~~fD-----~V~~~~vl~h~~d---~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
...+.|| .|+++.+|||+++ +..+++++.+.|+|||+|++.+...
T Consensus 145 ~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 145 SILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp HHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred hhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 1135566 4889999999998 5789999999999999999998664
No 160
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.55 E-value=4e-14 Score=121.11 Aligned_cols=114 Identities=23% Similarity=0.311 Sum_probs=91.7
Q ss_pred HHHHHhc--cCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCC--CCCCCeEEEEecCCCC
Q 021344 157 MAQEYFK--SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRADVCRL 231 (314)
Q Consensus 157 ~l~~~l~--~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~--~~~~~v~~~~~d~~~l 231 (314)
.+.+.+. ..++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.+++++...+. ....++.++.+|+...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 3444443 557889999999999999999987 4446999999999999999998876430 0025899999998766
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+..+++||+|++..+++++ ++++.++|||||++++....
T Consensus 146 ~~~~~~fD~i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVV------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CGGGCCEEEEEECSBBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred cccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEec
Confidence 5556789999999988876 46889999999999998754
No 161
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.54 E-value=2.3e-14 Score=130.94 Aligned_cols=114 Identities=19% Similarity=0.281 Sum_probs=95.1
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++..+ ...+++++.+|+.+++++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~--l~~~v~~~~~d~~~~~~~- 114 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEVSLP- 114 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCCS-
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcC--CCCcEEEEEcchhhCCCC-
Confidence 455556666678899999999999999999875 45999999996 8899999888776 346899999999988765
Q ss_pred CchhhheecchhccCCC--HHHHHHHHHhhcccCcEEEEEe
Q 021344 236 GFVDAVHAGAALHCWPS--PSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
++||+|++..+++|+.+ ....+.++.++|||||++++..
T Consensus 115 ~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 115 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 57999999988888754 4578889999999999998654
No 162
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.54 E-value=5.6e-15 Score=126.83 Aligned_cols=104 Identities=16% Similarity=0.194 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCC-HHHHHHH---HHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFS-ENMLRQC---YDFIKQDNTILTSNLALVRADVCRLPFASGFVDA 240 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s-~~~~~~a---~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~ 240 (314)
.++.+|||||||+|.++..+++..+..+|+|+|+| +.+++.| +++....+ ..++.++.+|+..+|. ..||+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~---~~~v~~~~~d~~~l~~--~~~d~ 97 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG---LSNVVFVIAAAESLPF--ELKNI 97 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC---CSSEEEECCBTTBCCG--GGTTC
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCHHHhhh--hccCe
Confidence 35789999999999999999977667799999999 6676666 66665554 2589999999998863 23455
Q ss_pred heecchhc-------c-CCCHHHHHHHHHhhcccCcEEEEE
Q 021344 241 VHAGAALH-------C-WPSPSNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 241 V~~~~vl~-------h-~~d~~~~l~~i~r~LkpGG~l~i~ 273 (314)
|.+..+.. | ..++..+++++.++|||||++++.
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 54443322 1 123457899999999999999983
No 163
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.54 E-value=7.4e-14 Score=120.92 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=97.2
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
......+...+...++.+|||+|||+|.++..+++.+ .+++++|+++.+++.|+++....+ ...++.++.+|+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~ 152 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNLKKFN--LGKNVKFFNVDFKDA 152 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHHHHTT--CCTTEEEECSCTTTS
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcC--CCCcEEEEEcChhhc
Confidence 3444577777777788999999999999999999884 499999999999999999988765 236899999999875
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
...+++||+|++ +.+++..+++++.++|||||++++..+
T Consensus 153 ~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 153 EVPEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp CCCTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ccCCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 435678999997 456888999999999999999999884
No 164
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.53 E-value=4.2e-14 Score=120.72 Aligned_cols=121 Identities=16% Similarity=0.128 Sum_probs=95.6
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
......+...+...++.+|||||||+|.++..+++..+ ..+++++|+++.+++.|++++...+ ...+++++.+|+.+
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 44 PTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN--LNDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHH
Confidence 44445555555556788999999999999999999855 5699999999999999999998876 34579999999854
Q ss_pred C-C-CC---CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 231 L-P-FA---SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 231 l-p-~~---~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
. + +. .++||+|++..... +...+++++.++|||||++++.....
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQ---NNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGG---GHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HHHHHHhcCCCCcCEEEEcCCcH---HHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 3 1 11 15799999876533 45688999999999999999876554
No 165
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.53 E-value=2.1e-14 Score=121.57 Aligned_cols=110 Identities=17% Similarity=0.207 Sum_probs=89.6
Q ss_pred HhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-CCCCCch
Q 021344 161 YFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFV 238 (314)
Q Consensus 161 ~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l-p~~~~~f 238 (314)
.+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++..+ ...+++++.+|+.+. +..++ |
T Consensus 51 l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~-f 127 (210)
T 3c3p_A 51 LARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG--LIDRVELQVGDPLGIAAGQRD-I 127 (210)
T ss_dssp HHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS--GGGGEEEEESCHHHHHTTCCS-E
T ss_pred HHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCceEEEEEecHHHHhccCCC-C
Confidence 33344678999999999999999998754 5699999999999999999988765 235799999998653 44456 9
Q ss_pred hhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
|+|++... ..+...+++++.++|||||++++.+..
T Consensus 128 D~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 128 DILFMDCD---VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp EEEEEETT---TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred CEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 99998743 456789999999999999999986643
No 166
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.53 E-value=2.2e-14 Score=129.23 Aligned_cols=123 Identities=16% Similarity=0.152 Sum_probs=96.9
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.....+...+...++.+|||+|||+|..+..+++... ..+|+|+|+++.+++.++++++..+. .++.++++|+..+
T Consensus 105 ~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~ 181 (315)
T 1ixk_A 105 ASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHI 181 (315)
T ss_dssp HHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGG
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhc
Confidence 3344555667778889999999999999999998742 46999999999999999999988763 5799999999887
Q ss_pred CCCCCchhhheec------chhccCCCH----------------HHHHHHHHhhcccCcEEEEEecccC
Q 021344 232 PFASGFVDAVHAG------AALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 232 p~~~~~fD~V~~~------~vl~h~~d~----------------~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+..+++||+|++. .++.+.++. ..+|+++.++|||||++++++.+..
T Consensus 182 ~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 182 GELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp GGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred ccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 6556789999973 334443321 4789999999999999999886543
No 167
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.53 E-value=8.1e-14 Score=126.63 Aligned_cols=119 Identities=18% Similarity=0.229 Sum_probs=92.6
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcC-------CC-CCCCeE
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN-------TI-LTSNLA 222 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~-------~~-~~~~v~ 222 (314)
......+...+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.|++++...+ .. ...+++
T Consensus 91 ~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 91 PKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 344556677777788999999999999999999987 665799999999999999999887521 00 125899
Q ss_pred EEEecCCCC--CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 223 LVRADVCRL--PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 223 ~~~~d~~~l--p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
++.+|+.+. ++++++||+|++. .+++..+++++.++|||||++++...
T Consensus 171 ~~~~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 171 FIHKDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp EEESCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred EEECChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999999876 4566789999984 34566689999999999999998774
No 168
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.53 E-value=4.3e-14 Score=120.97 Aligned_cols=114 Identities=19% Similarity=0.292 Sum_probs=92.1
Q ss_pred HHHHHh--ccCCCCeEEEEcCcccHHHHHHHHhC-----CCCeEEEEeCCHHHHHHHHHHHHhcCC--CCCCCeEEEEec
Q 021344 157 MAQEYF--KSAQGGLLVDVSCGSGLFSRKFAKSG-----TYSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRAD 227 (314)
Q Consensus 157 ~l~~~l--~~~~~~~iLDiGcG~G~~~~~l~~~~-----~~~~v~giD~s~~~~~~a~~~~~~~~~--~~~~~v~~~~~d 227 (314)
.+.+.+ ...++.+|||||||+|.++..+++.. +..+|+++|+++.+++.|+++++..+. ....++.++.+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 344444 35568899999999999999999875 356999999999999999999877540 002689999999
Q ss_pred CCCCC----CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 228 VCRLP----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 228 ~~~lp----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+.... ...++||+|++..+++|+ ++++.++|||||++++....
T Consensus 149 ~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 149 IYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred hHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 97754 456789999999998876 47889999999999998753
No 169
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.53 E-value=8e-15 Score=142.38 Aligned_cols=107 Identities=16% Similarity=0.234 Sum_probs=91.1
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC--CCCCCchhhhee
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHA 243 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l--p~~~~~fD~V~~ 243 (314)
.+.+|||||||.|.++..|++.|. +|+|||+++.+++.|+....+.+ ..++++.+++++++ ++.+++||+|++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENP---DFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTST---TSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcC---CCceEEEECCHHHHhhhccCCCccEEEE
Confidence 467999999999999999999987 99999999999999999888765 25899999999887 456789999999
Q ss_pred cchhccCCCHHH--HHHHHHhhcccCcEEEEEeccc
Q 021344 244 GAALHCWPSPSN--AVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 244 ~~vl~h~~d~~~--~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
..+|||++|+.. .+..+.+.|+++|..++.....
T Consensus 141 ~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 141 LSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp ESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred CcchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 999999998863 3556777788888777666544
No 170
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.53 E-value=1.2e-14 Score=126.51 Aligned_cols=118 Identities=19% Similarity=0.107 Sum_probs=88.4
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHhc---CCCCCCC-----------
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS--GTYSGVVALDFSENMLRQCYDFIKQD---NTILTSN----------- 220 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~--~~~~~v~giD~s~~~~~~a~~~~~~~---~~~~~~~----------- 220 (314)
.+.+.+...++.+|||+|||+|.++..+++. .+..+|+|+|+|+.+++.|++++... +. ..+
T Consensus 42 ~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~--~~~~~~~~~~~~~~ 119 (250)
T 1o9g_A 42 RALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL--TARELERREQSERF 119 (250)
T ss_dssp HHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH--HHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc--cccchhhhhhhhhc
Confidence 3333443345679999999999999999887 44458999999999999999877653 21 011
Q ss_pred --------------eE-------------EEEecCCCCCC-----CCCchhhheecchhccCCC---------HHHHHHH
Q 021344 221 --------------LA-------------LVRADVCRLPF-----ASGFVDAVHAGAALHCWPS---------PSNAVAE 259 (314)
Q Consensus 221 --------------v~-------------~~~~d~~~lp~-----~~~~fD~V~~~~vl~h~~d---------~~~~l~~ 259 (314)
++ ++++|+.+... ..++||+|+++..+.+..+ ...++++
T Consensus 120 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~ 199 (250)
T 1o9g_A 120 GKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRS 199 (250)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHH
Confidence 56 99999877321 3448999999876665543 3489999
Q ss_pred HHhhcccCcEEEEEecc
Q 021344 260 ISRILRSGGVFVGTTFL 276 (314)
Q Consensus 260 i~r~LkpGG~l~i~~~~ 276 (314)
+.++|||||++++....
T Consensus 200 ~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 200 LASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHSCTTCEEEEEESS
T ss_pred HHHhcCCCcEEEEeCcc
Confidence 99999999999995543
No 171
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.52 E-value=3.1e-14 Score=116.24 Aligned_cols=100 Identities=21% Similarity=0.251 Sum_probs=86.0
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC--------CC
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------FA 234 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp--------~~ 234 (314)
..++.+|||+|||+|.++..+++. ++..+++|+|+++ +++ ..++.++.+|+.+.+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccccchhhhhhhccCC
Confidence 456789999999999999999988 5557999999998 542 157899999998876 66
Q ss_pred CCchhhheecchhccCCCH-----------HHHHHHHHhhcccCcEEEEEeccc
Q 021344 235 SGFVDAVHAGAALHCWPSP-----------SNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~-----------~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+++||+|++..++++..++ ..+++++.++|||||.+++.++..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 7899999999999888877 789999999999999999988654
No 172
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.52 E-value=1.4e-14 Score=125.17 Aligned_cols=108 Identities=14% Similarity=0.098 Sum_probs=86.2
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHh----CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS----GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL- 231 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~----~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l- 231 (314)
.+...+...++.+|||||||+|..+..+++. ++..+|+|+|+++.+++.|+. ...+++++++|+.+.
T Consensus 72 ~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~--------~~~~v~~~~gD~~~~~ 143 (236)
T 2bm8_A 72 VYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS--------DMENITLHQGDCSDLT 143 (236)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG--------GCTTEEEEECCSSCSG
T ss_pred HHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc--------cCCceEEEECcchhHH
Confidence 3444444445689999999999999999987 556799999999999888872 236899999999874
Q ss_pred --CCCC-CchhhheecchhccCCCHHHHHHHHHh-hcccCcEEEEEec
Q 021344 232 --PFAS-GFVDAVHAGAALHCWPSPSNAVAEISR-ILRSGGVFVGTTF 275 (314)
Q Consensus 232 --p~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r-~LkpGG~l~i~~~ 275 (314)
+..+ .+||+|++... | .+...++.++.+ +|||||++++.+.
T Consensus 144 ~l~~~~~~~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 144 TFEHLREMAHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp GGGGGSSSCSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HHHhhccCCCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 5433 37999998665 4 377889999997 9999999999764
No 173
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.52 E-value=1.9e-13 Score=125.09 Aligned_cols=116 Identities=14% Similarity=0.199 Sum_probs=98.1
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.++.....+|||||||+|.++..++++.|+.+++..|. +.+++.|++.+...+ ..+++++.+|+.+.|.+
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~~-- 243 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPLP-- 243 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC--
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc---cCceeeecCccccCCCC--
Confidence 444455566678999999999999999999999999999997 889999998776543 47899999999876654
Q ss_pred chhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEecccC
Q 021344 237 FVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
.+|+|++.++||+++|+. ++|++++++|+|||+++|.+....
T Consensus 244 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 244 EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 479999999999999884 789999999999999999887654
No 174
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.52 E-value=7.1e-14 Score=120.30 Aligned_cols=107 Identities=22% Similarity=0.274 Sum_probs=85.3
Q ss_pred hccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC---CCCCCCc
Q 021344 162 FKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASGF 237 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~---lp~~~~~ 237 (314)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.+.+..+.. .++.++.+|+.+ +++.+++
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~~ 147 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIAM 147 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCCC
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCCc
Confidence 44567889999999999999999987 34569999999999888777766543 579999999987 4555778
Q ss_pred hhhheecchhccCCCH-HHHHHHHHhhcccCcEEEEEecc
Q 021344 238 VDAVHAGAALHCWPSP-SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~-~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
||+|++... .++. ..++.++.++|||||++++....
T Consensus 148 ~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 148 VDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp EEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 999998544 2222 45688999999999999996543
No 175
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.52 E-value=2.9e-14 Score=130.38 Aligned_cols=102 Identities=17% Similarity=0.199 Sum_probs=89.2
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
..+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p--~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFT-SIP--NADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTT-CCC--CCSEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccC-CCC--CccEEEe
Confidence 34568999999999999999999988789999999 999887764 1469999999976 554 3999999
Q ss_pred cchhccCCCHH--HHHHHHHhhccc---CcEEEEEecccC
Q 021344 244 GAALHCWPSPS--NAVAEISRILRS---GGVFVGTTFLRY 278 (314)
Q Consensus 244 ~~vl~h~~d~~--~~l~~i~r~Lkp---GG~l~i~~~~~~ 278 (314)
.+++||++|+. .+|++++++||| ||++++.++...
T Consensus 253 ~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 253 KYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred ehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 99999999988 999999999999 999999887654
No 176
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.52 E-value=2.1e-14 Score=122.73 Aligned_cols=120 Identities=15% Similarity=0.162 Sum_probs=94.6
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.....+...+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.++++++..+ ...+++++.+|+.+.
T Consensus 51 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~ 128 (225)
T 3tr6_A 51 EQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG--LSDKIGLRLSPAKDT 128 (225)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC--CCCceEEEeCCHHHH
Confidence 3344555555555678999999999999999998754 5699999999999999999998876 345699999998543
Q ss_pred -C-CCC----CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 232 -P-FAS----GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 232 -p-~~~----~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+ +.. ++||+|++... ..+...+++++.++|||||++++.....
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 2 111 78999997554 2346789999999999999999977654
No 177
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.51 E-value=1.3e-13 Score=122.29 Aligned_cols=121 Identities=16% Similarity=0.091 Sum_probs=92.2
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHH-----HhcCCC--CCCCeEEE
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF-SENMLRQCYDFI-----KQDNTI--LTSNLALV 224 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~-----~~~~~~--~~~~v~~~ 224 (314)
...+.+.......++.+|||+|||+|.++..+++.+ ..+|+|+|+ ++.+++.+++++ +..+.. ...++.+.
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~ 144 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVV 144 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEE
Confidence 344555555555567899999999999999998876 348999999 899999999998 433310 00368888
Q ss_pred EecCCCCC--C----CCCchhhheecchhccCCCHHHHHHHHHhhcc---c--CcEEEEEe
Q 021344 225 RADVCRLP--F----ASGFVDAVHAGAALHCWPSPSNAVAEISRILR---S--GGVFVGTT 274 (314)
Q Consensus 225 ~~d~~~lp--~----~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~Lk---p--GG~l~i~~ 274 (314)
..|..+.. + .+++||+|++..+++|.++...+++.+.++|| | ||++++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 145 PYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp ECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred EecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 76654421 1 35789999999999999999999999999999 9 99887754
No 178
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.51 E-value=9.7e-14 Score=127.06 Aligned_cols=124 Identities=20% Similarity=0.080 Sum_probs=101.7
Q ss_pred CCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEec
Q 021344 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (314)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d 227 (314)
+........+.......++.+|||+|||+|.++..++..+ +..+++|+|+++.+++.|+++++..+. .+++++++|
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~---~~i~~~~~D 262 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL---SWIRFLRAD 262 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC---TTCEEEECC
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC---CceEEEeCC
Confidence 3345566677777777788899999999999999999976 566999999999999999999998873 389999999
Q ss_pred CCCCCCCCCchhhheecchhccCC--------CHHHHHHHHHhhcccCcEEEEEec
Q 021344 228 VCRLPFASGFVDAVHAGAALHCWP--------SPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~--------d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+.+++.+.+.||+|+++-...... ....+++++.++|||||.+++.+.
T Consensus 263 ~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 263 ARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp GGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred hhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999887777899999954332211 125789999999999999999984
No 179
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.51 E-value=3.7e-14 Score=127.16 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc-CCCCCCCeEEEEecCCCCCC--CCCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD-NTILTSNLALVRADVCRLPF--ASGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~~~~v~~~~~d~~~lp~--~~~~fD~V 241 (314)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.+++++... ......+++++.+|+...+. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999998765669999999999999999976321 00023689999999876543 36789999
Q ss_pred eecchhccCCCH----HHHHHHHHhhcccCcEEEEEec
Q 021344 242 HAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 242 ~~~~vl~h~~d~----~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
++.....+.++. ..+++++.++|||||++++...
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 997655443332 5889999999999999999863
No 180
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.51 E-value=3.9e-14 Score=120.15 Aligned_cols=90 Identities=17% Similarity=0.292 Sum_probs=78.7
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
..++.+|||||||+|.++..++ .+++|+|+++. ++.++.+|+.++++++++||+|++
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred cCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEEE
Confidence 3467899999999999988773 38999999875 356789999998888889999999
Q ss_pred cchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 244 ~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
..++|| .++..+++++.++|||||++++.++..
T Consensus 122 ~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 122 CLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp ESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred ehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 999975 899999999999999999999988654
No 181
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.50 E-value=2.7e-14 Score=126.19 Aligned_cols=123 Identities=14% Similarity=0.159 Sum_probs=96.6
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC--
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-- 233 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-- 233 (314)
.+...+...++.+|||+|||+|..+..+++...+ .+|+++|+++.+++.++++++..+. .++.++.+|+..++.
T Consensus 74 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 74 IPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYL 150 (274)
T ss_dssp HHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHH
T ss_pred HHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhh
Confidence 3445666778899999999999999999986433 6999999999999999999988763 589999999877654
Q ss_pred --CCCchhhheec------chhc------------cCCCHHHHHHHHHhhcccCcEEEEEecccCCCCC
Q 021344 234 --ASGFVDAVHAG------AALH------------CWPSPSNAVAEISRILRSGGVFVGTTFLRYTSST 282 (314)
Q Consensus 234 --~~~~fD~V~~~------~vl~------------h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~~~~ 282 (314)
..++||+|++. .++. +......+++++.++|||||++++++.+..+..+
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~en 219 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEEN 219 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSS
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHh
Confidence 25689999986 2222 2245578999999999999999998876554433
No 182
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.50 E-value=6.3e-15 Score=127.88 Aligned_cols=121 Identities=9% Similarity=0.076 Sum_probs=96.5
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
......+...+...++.+|||||||+|..+..+++..+ +.+|+++|+++.+++.|+++++..+ ...+++++.+|+.+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 46 PEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK--QEHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT--CTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHH
Confidence 34445555555555678999999999999999998753 6699999999999999999998876 34689999999865
Q ss_pred C-CCC-----CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 231 L-PFA-----SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 231 l-p~~-----~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
. +.. +++||+|++... ..+...+++++.++|||||++++.....
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred HHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 3 221 478999998765 2345678999999999999999977654
No 183
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=8.4e-14 Score=122.88 Aligned_cols=107 Identities=20% Similarity=0.203 Sum_probs=92.0
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
..++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.|+++++..++ .++.++.+|+.+.+. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l---~~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL---NNVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC---SSEEEEESCGGGCCC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEECChHHcCc-cCCceEEEE
Confidence 4567899999999999999999986567999999999999999999988763 578999999987743 568999998
Q ss_pred cchhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 244 ~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
.... +...++.++.+.|||||++++......
T Consensus 193 d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred CCcc----cHHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 7553 667889999999999999999887653
No 184
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.50 E-value=1.4e-13 Score=122.13 Aligned_cols=117 Identities=18% Similarity=0.205 Sum_probs=92.2
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
+..++.+.+.+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++++..+. ..+++++++|+..
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l--~~~v~~~~~D~~~- 184 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV--SDRFFVRKGEFLE- 184 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC--TTSEEEEESSTTG-
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcchh-
Confidence 344556666655446779999999999999999998 667999999999999999999988762 3469999999976
Q ss_pred CCCCCch---hhheec------------chhccCC--------CHHHHHHHHH-hhcccCcEEEEEe
Q 021344 232 PFASGFV---DAVHAG------------AALHCWP--------SPSNAVAEIS-RILRSGGVFVGTT 274 (314)
Q Consensus 232 p~~~~~f---D~V~~~------------~vl~h~~--------d~~~~l~~i~-r~LkpGG~l~i~~ 274 (314)
+++ ++| |+|+++ .+. |-+ |...+++++. +.|+|||++++..
T Consensus 185 ~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 185 PFK-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp GGG-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred hcc-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 332 579 999996 222 322 2237899999 9999999999865
No 185
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.50 E-value=5.3e-14 Score=122.44 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=94.9
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.....+...+...++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++++..+ ...+++++.+|+.+.
T Consensus 66 ~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~ 143 (247)
T 1sui_A 66 DEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG--VDHKIDFREGPALPV 143 (247)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT--CGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHH
Confidence 3334444444555678999999999999999998854 5699999999999999999998876 345899999998653
Q ss_pred -CC------CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 232 -PF------ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 232 -p~------~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+. .+++||+|++... ..+...+++++.++|||||++++.....
T Consensus 144 l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 144 LDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp HHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred HHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 32 1578999998654 3467889999999999999999876443
No 186
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.49 E-value=3.3e-13 Score=115.52 Aligned_cols=104 Identities=16% Similarity=0.229 Sum_probs=83.6
Q ss_pred ccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC---CCCCch
Q 021344 163 KSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFV 238 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp---~~~~~f 238 (314)
...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.++++++.. .++.++.+|+.... ...++|
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEECCTTCGGGGTTTCCCE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEccCCCcchhhcccCCc
Confidence 3567889999999999999999987 44569999999999999998877642 58999999998732 123589
Q ss_pred hhheecchhccCCCH-HHHHHHHHhhcccCcEEEEEe
Q 021344 239 DAVHAGAALHCWPSP-SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 239 D~V~~~~vl~h~~d~-~~~l~~i~r~LkpGG~l~i~~ 274 (314)
|+|++... .++. ..+++++.++|||||++++..
T Consensus 145 D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 145 DVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99997654 2333 355999999999999999973
No 187
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.49 E-value=8.8e-14 Score=132.05 Aligned_cols=113 Identities=19% Similarity=0.291 Sum_probs=93.5
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++..+ ...+++++.+|+.+++++
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~g--l~~~v~~~~~d~~~~~~~- 222 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEVSLP- 222 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCCS-
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHcC--CCCcEEEEECchhhCccC-
Confidence 345555555678899999999999999998864 45999999998 9999999988876 346899999999887764
Q ss_pred CchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEE
Q 021344 236 GFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~ 273 (314)
++||+|++..+++|+.+. ...+.++.++|||||++++.
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 589999998888887654 46778889999999999853
No 188
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.49 E-value=6e-14 Score=120.24 Aligned_cols=113 Identities=24% Similarity=0.376 Sum_probs=89.2
Q ss_pred HHHHHh--ccCCCCeEEEEcCcccHHHHHHHHhCC------CCeEEEEeCCHHHHHHHHHHHHhcCC--CCCCCeEEEEe
Q 021344 157 MAQEYF--KSAQGGLLVDVSCGSGLFSRKFAKSGT------YSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRA 226 (314)
Q Consensus 157 ~l~~~l--~~~~~~~iLDiGcG~G~~~~~l~~~~~------~~~v~giD~s~~~~~~a~~~~~~~~~--~~~~~v~~~~~ 226 (314)
.+.+.+ ...++.+|||||||+|.++..+++... ..+|+++|+++.+++.+++++...+. ....++.++.+
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 152 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG 152 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC
Confidence 444455 355688999999999999999988532 24899999999999999998765320 00257999999
Q ss_pred cCCCCCCCC-CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 227 DVCRLPFAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 227 d~~~lp~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
|+.. ++++ ++||+|++..+++|+. +++.+.|||||++++....
T Consensus 153 d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 153 DGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred Cccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 9876 4444 7899999999999875 7889999999999998743
No 189
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.49 E-value=1.4e-13 Score=118.88 Aligned_cols=121 Identities=18% Similarity=0.209 Sum_probs=95.6
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
......+...+...++.+|||||||+|.++..+++..+ ..+++++|+++.+++.|+++++..+. ..++.++.+|+.+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 46 PEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSALE 123 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHH
T ss_pred HHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHH
Confidence 34455666666666788999999999999999999854 56999999999999999999887662 3459999999754
Q ss_pred C-C--------------CCC--CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 231 L-P--------------FAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 231 l-p--------------~~~--~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
. + |++ ++||+|++....+ +...+++++.++|||||++++.+...
T Consensus 124 ~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 124 TLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHHhhcccccccccccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 2 2 122 7899999876544 34688999999999999999977443
No 190
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.48 E-value=6.1e-14 Score=125.01 Aligned_cols=112 Identities=16% Similarity=0.270 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCC--CCCCCeEEEEecCCCC-CCCCCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT--ILTSNLALVRADVCRL-PFASGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~--~~~~~v~~~~~d~~~l-p~~~~~fD~V 241 (314)
.++.+|||||||+|.+++.+++..+..+|+++|+++.+++.|++++...+. ....+++++.+|+... ...+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 356799999999999999999986567999999999999999998765310 0136899999998663 3446789999
Q ss_pred eecchhccCCCH----HHHHHHHHhhcccCcEEEEEecc
Q 021344 242 HAGAALHCWPSP----SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 242 ~~~~vl~h~~d~----~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++.......+.. ..+++++.++|||||++++...+
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 995442222211 67999999999999999997743
No 191
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.48 E-value=3.6e-13 Score=115.68 Aligned_cols=112 Identities=14% Similarity=0.115 Sum_probs=83.2
Q ss_pred HHHHHHHhc---cCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 155 FKMAQEYFK---SAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 155 ~~~l~~~l~---~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
...+...+. ..++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++...+..+.. .++.++.+|+..
T Consensus 62 a~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-----~nv~~i~~Da~~ 136 (232)
T 3id6_C 62 AGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-----PNIFPLLADARF 136 (232)
T ss_dssp HHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----TTEEEEECCTTC
T ss_pred HHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----CCeEEEEccccc
Confidence 334444443 678999999999999999999876 55669999999999876555444332 689999999976
Q ss_pred CC---CCCCchhhheecchhccCCCHHHHH-HHHHhhcccCcEEEEEe
Q 021344 231 LP---FASGFVDAVHAGAALHCWPSPSNAV-AEISRILRSGGVFVGTT 274 (314)
Q Consensus 231 lp---~~~~~fD~V~~~~vl~h~~d~~~~l-~~i~r~LkpGG~l~i~~ 274 (314)
.. ...++||+|++.... ++....+ ..+.++|||||++++..
T Consensus 137 ~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 137 PQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp GGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 42 124689999987543 4555544 55666999999999874
No 192
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.48 E-value=5.1e-14 Score=127.69 Aligned_cols=120 Identities=10% Similarity=0.044 Sum_probs=92.5
Q ss_pred HHHHHHHHhc-cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCC-CeEEEEecCCCC
Q 021344 154 EFKMAQEYFK-SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRL 231 (314)
Q Consensus 154 ~~~~l~~~l~-~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~-~v~~~~~d~~~l 231 (314)
..+.+.+.+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|+++++..++ .. +++++++|+.+.
T Consensus 140 ~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl--~~~~v~~i~~D~~~~ 215 (332)
T 2igt_A 140 HWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGL--EQAPIRWICEDAMKF 215 (332)
T ss_dssp HHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTC--TTSCEEEECSCHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECcHHHH
Confidence 3344555554 34577999999999999999999876 999999999999999999988763 22 599999998764
Q ss_pred CC----CCCchhhheecc----------hhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 232 PF----ASGFVDAVHAGA----------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 232 p~----~~~~fD~V~~~~----------vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.. ..++||+|++.- ++++..+...+++++.++|||||++++.....
T Consensus 216 l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 216 IQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 31 146899999832 22334456789999999999999987766543
No 193
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.48 E-value=1.6e-13 Score=125.87 Aligned_cols=103 Identities=22% Similarity=0.368 Sum_probs=88.5
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee-
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA- 243 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~- 243 (314)
.++++|||||||+|.++..+++.|. .+|+|+|.|+ +++.|++.++.++ ...+|+++.+|++++.++ ++||+|++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~--~~~~i~~i~~~~~~~~lp-e~~DvivsE 156 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNG--LEDRVHVLPGPVETVELP-EQVDAIVSE 156 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTT--CTTTEEEEESCTTTCCCS-SCEEEEECC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcC--CCceEEEEeeeeeeecCC-ccccEEEee
Confidence 3688999999999999999998874 4899999996 7899999998887 467899999999988775 67999998
Q ss_pred --cchhccCCCHHHHHHHHHhhcccCcEEEE
Q 021344 244 --GAALHCWPSPSNAVAEISRILRSGGVFVG 272 (314)
Q Consensus 244 --~~vl~h~~d~~~~l~~i~r~LkpGG~l~i 272 (314)
...+.+-.....++....+.|||||.++-
T Consensus 157 ~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 157 WMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccccchhhhHHHHHHhhCCCCceECC
Confidence 45566666788999999999999999764
No 194
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.47 E-value=6.9e-14 Score=117.29 Aligned_cols=99 Identities=12% Similarity=0.288 Sum_probs=79.5
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC---------
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGT--YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--------- 232 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~--~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp--------- 232 (314)
..++.+|||+|||+|.++..+++..+ ..+|+|+|+++.. ...++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------------CCCCceEEEccccchhhhhhccccc
Confidence 35678999999999999999998865 4699999999831 1257899999998876
Q ss_pred ----------------CCCCchhhheecchhccCC----CHH-------HHHHHHHhhcccCcEEEEEecc
Q 021344 233 ----------------FASGFVDAVHAGAALHCWP----SPS-------NAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 ----------------~~~~~fD~V~~~~vl~h~~----d~~-------~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+++++||+|++..++++.. +.. .+++++.++|||||.+++..+.
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5667899999988777642 221 3789999999999999997754
No 195
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.47 E-value=7.3e-14 Score=122.01 Aligned_cols=103 Identities=18% Similarity=0.227 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.+++++...+. . +++..+|+.. ++++++||+|+++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~---~-v~~~~~d~~~-~~~~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGV---R-PRFLEGSLEA-ALPFGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTC---C-CEEEESCHHH-HGGGCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChhh-cCcCCCCCEEEEC
Confidence 4578999999999999999999886 999999999999999999887662 2 8999998865 2446789999997
Q ss_pred chhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 245 ~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
...++ ...+++++.++|||||++++.....
T Consensus 192 ~~~~~---~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 192 LYAEL---HAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp CCHHH---HHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred CcHHH---HHHHHHHHHHHcCCCCEEEEEeecc
Confidence 66554 4688999999999999999987543
No 196
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.47 E-value=3.4e-13 Score=115.21 Aligned_cols=129 Identities=12% Similarity=0.072 Sum_probs=100.1
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+++. ++.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++..+ ...++++..+|..+...
T Consensus 11 RL~~i~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g--l~~~I~~~~gD~l~~~~ 86 (230)
T 3lec_A 11 RLQKVANYVP--KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG--LTSKIDVRLANGLSAFE 86 (230)
T ss_dssp HHHHHHTTSC--TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCC--CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECchhhccc
Confidence 3445555554 4789999999999999999999876789999999999999999999987 35679999999877654
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccCCCCCccchHHHHHHHHhh
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLREVMLIR 296 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~~~~~~~~~~l~~~~~~~ 296 (314)
++++||+|+..+.--. -...++.+..+.|+++|+|++.... ....+++|+...
T Consensus 87 ~~~~~D~IviaGmGg~--lI~~IL~~~~~~l~~~~~lIlqp~~--------~~~~lr~~L~~~ 139 (230)
T 3lec_A 87 EADNIDTITICGMGGR--LIADILNNDIDKLQHVKTLVLQPNN--------REDDLRKWLAAN 139 (230)
T ss_dssp GGGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS--------CHHHHHHHHHHT
T ss_pred cccccCEEEEeCCchH--HHHHHHHHHHHHhCcCCEEEEECCC--------ChHHHHHHHHHC
Confidence 4447999886544221 1356788889999999999988732 256666666543
No 197
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.46 E-value=3.3e-13 Score=127.36 Aligned_cols=123 Identities=18% Similarity=0.258 Sum_probs=100.7
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.....+...+...++.+|||+|||+|..+..++...++ .+++++|+++.+++.++++++..+. .++.++.+|+..+
T Consensus 246 ~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~ 322 (450)
T 2yxl_A 246 EASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---KIVKPLVKDARKA 322 (450)
T ss_dssp HHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCTTCC
T ss_pred chhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---CcEEEEEcChhhc
Confidence 33445566677778899999999999999999987544 6999999999999999999988763 5899999999887
Q ss_pred C--CCCCchhhhee------cchhccCCCH----------------HHHHHHHHhhcccCcEEEEEecccC
Q 021344 232 P--FASGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 232 p--~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+ +++++||+|++ ..++++.++. ..+|+++.++|||||++++++.+..
T Consensus 323 ~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 323 PEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred chhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 6 55578999996 4556665554 5789999999999999999886654
No 198
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.46 E-value=1.2e-13 Score=118.92 Aligned_cols=119 Identities=13% Similarity=0.090 Sum_probs=93.2
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC--
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-- 230 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-- 230 (314)
....+...+...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|+++++..+ ...+++++.+|+.+
T Consensus 60 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 60 QAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG--VAEKISLRLGPALATL 137 (232)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHH
Confidence 334444444445678999999999999999998754 5699999999999999999988766 23579999999743
Q ss_pred --CCCCC--CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 231 --LPFAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 231 --lp~~~--~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++..+ ++||+|++.... .+...+++++.++|||||++++.....
T Consensus 138 ~~l~~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 138 EQLTQGKPLPEFDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp HHHHTSSSCCCEEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred HHHHhcCCCCCcCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 22323 789999987552 356788999999999999999976554
No 199
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.46 E-value=9.8e-14 Score=127.19 Aligned_cols=101 Identities=18% Similarity=0.181 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ +||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~--~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SIP--SADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CCC--CCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CCC--CceEEEEc
Confidence 4567999999999999999999988889999999 788776653 2469999999987 665 49999999
Q ss_pred chhccCCCHH--HHHHHHHhhccc---CcEEEEEecccC
Q 021344 245 AALHCWPSPS--NAVAEISRILRS---GGVFVGTTFLRY 278 (314)
Q Consensus 245 ~vl~h~~d~~--~~l~~i~r~Lkp---GG~l~i~~~~~~ 278 (314)
+++||++|+. .+|+++.++||| ||++++.++...
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 9999999987 999999999999 999999887653
No 200
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.45 E-value=6.4e-14 Score=124.45 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=89.4
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++...+ ...+++++.+|+.++
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTP--VASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTST--TGGGEEEEESCTTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcC--CCCceEEEEcceecc
Confidence 44566777778777889999999999999999999876 99999999999999999886543 125899999999887
Q ss_pred CCCCCchhhheec-----------chhccCCCHHHHH----HHH--HhhcccCcEEE
Q 021344 232 PFASGFVDAVHAG-----------AALHCWPSPSNAV----AEI--SRILRSGGVFV 271 (314)
Q Consensus 232 p~~~~~fD~V~~~-----------~vl~h~~d~~~~l----~~i--~r~LkpGG~l~ 271 (314)
+++ +||+|+++ .+++|.++....+ +++ +++|||||.++
T Consensus 90 ~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 765 79999985 4566655543211 333 46899999763
No 201
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.45 E-value=1.7e-13 Score=117.40 Aligned_cols=120 Identities=15% Similarity=0.112 Sum_probs=94.4
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.....+.......++.+|||||||+|.++..+++..+ ..+++++|+++.+++.|+++++..+ ...+++++.+|+.+.
T Consensus 56 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 56 EQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE--AEHKIDLRLKPALET 133 (229)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT--CTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCCeEEEEEcCHHHH
Confidence 3444555555556678999999999999999998754 5699999999999999999998876 346899999998543
Q ss_pred -C-CCC----CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 232 -P-FAS----GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 232 -p-~~~----~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+ +.+ ++||+|++... ..+...+++++.++|||||++++.....
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred HHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 1 211 68999998654 3456788999999999999999976543
No 202
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.45 E-value=2.4e-14 Score=117.75 Aligned_cols=92 Identities=17% Similarity=0.193 Sum_probs=80.3
Q ss_pred hccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---CCCch
Q 021344 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFV 238 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~---~~~~f 238 (314)
+...++.+|||+|||. +++|+|+.|++.|+++.. .+++++++|+.++++ ++++|
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred cCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCE
Confidence 3456789999999986 239999999999998742 358999999998887 78899
Q ss_pred hhheecchhccC-CCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 239 DAVHAGAALHCW-PSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 239 D~V~~~~vl~h~-~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
|+|++..++||+ +++..++++++++|||||++++..+.
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 999999999999 99999999999999999999997653
No 203
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.44 E-value=5.8e-13 Score=114.71 Aligned_cols=129 Identities=11% Similarity=0.069 Sum_probs=98.4
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+++.. +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++..+ ...++++..+|..+...
T Consensus 11 RL~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 11 RLEKVASYITK--NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG--LTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHHHTTCCS--SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCC--CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEecchhhccC
Confidence 34455555553 689999999999999999999876689999999999999999999887 34679999999877554
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccCCCCCccchHHHHHHHHhh
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLREVMLIR 296 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~~~~~~~~~~l~~~~~~~ 296 (314)
++++||+|+..+.--. -...++.+..+.|+++|+|++.... ....+++|+...
T Consensus 87 ~~~~~D~IviagmGg~--lI~~IL~~~~~~L~~~~~lIlq~~~--------~~~~lr~~L~~~ 139 (244)
T 3gnl_A 87 KKDAIDTIVIAGMGGT--LIRTILEEGAAKLAGVTKLILQPNI--------AAWQLREWSEQN 139 (244)
T ss_dssp GGGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS--------CHHHHHHHHHHH
T ss_pred ccccccEEEEeCCchH--HHHHHHHHHHHHhCCCCEEEEEcCC--------ChHHHHHHHHHC
Confidence 3346999886543221 1356788999999999999998732 245566665443
No 204
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.44 E-value=3.6e-13 Score=126.39 Aligned_cols=123 Identities=19% Similarity=0.232 Sum_probs=101.5
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
+.....+...+...++.+|||+|||+|..+..+++..++.+++++|+++.+++.++++++..+ .++.++.+|+..+
T Consensus 232 d~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g----~~~~~~~~D~~~~ 307 (429)
T 1sqg_A 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG----MKATVKQGDGRYP 307 (429)
T ss_dssp CHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEEECCTTCT
T ss_pred CHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC----CCeEEEeCchhhc
Confidence 344556666777788899999999999999999998766799999999999999999998876 3589999999887
Q ss_pred C--CCCCchhhhee------cchhccCCCH----------------HHHHHHHHhhcccCcEEEEEecccC
Q 021344 232 P--FASGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 232 p--~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
+ +++++||+|++ .+++++.++. ..+++++.++|||||++++++.+..
T Consensus 308 ~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred hhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 6 55678999985 3456665553 3789999999999999999886543
No 205
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.44 E-value=2.5e-13 Score=120.49 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=86.1
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC-CCCCeEEEEecCCCC-CCCCCchhhhe
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI-LTSNLALVRADVCRL-PFASGFVDAVH 242 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~-~~~~v~~~~~d~~~l-p~~~~~fD~V~ 242 (314)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++...+.. ...+++++.+|+.+. +..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 3568999999999999999998866679999999999999999987542100 136899999998653 32357899999
Q ss_pred ecchhccCCCH----HHHHHHHHhhcccCcEEEEEec
Q 021344 243 AGAALHCWPSP----SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 243 ~~~vl~h~~d~----~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+.....+.+.. ..+++++.++|||||++++...
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 85432221111 5899999999999999999863
No 206
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=7.5e-14 Score=127.72 Aligned_cols=110 Identities=16% Similarity=0.162 Sum_probs=85.2
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCc------ccHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEE
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCG------SGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG------~G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~ 225 (314)
...+.+.+.+.. ++.+||||||| +|..+..+++ .+++.+|+|+|+|+.+. . ...++++++
T Consensus 204 ~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~----~~~rI~fv~ 270 (419)
T 3sso_A 204 PHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V----DELRIRTIQ 270 (419)
T ss_dssp HHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G----CBTTEEEEE
T ss_pred HHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h----cCCCcEEEE
Confidence 344444444433 46799999999 5555555554 45677999999999872 1 137899999
Q ss_pred ecCCCCCCC------CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 226 ADVCRLPFA------SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 226 ~d~~~lp~~------~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+|+.++++. +++||+|++.. .+++.+...+|+++.++|||||++++.+..
T Consensus 271 GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 271 GDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999998876 68999999864 466778889999999999999999998876
No 207
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.43 E-value=2.7e-13 Score=117.11 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=93.4
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
.....+...+...++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++++..+ ...+++++.+|+.+.
T Consensus 57 ~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~ 134 (237)
T 3c3y_A 57 LAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG--VEHKINFIESDAMLA 134 (237)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHH
Confidence 3334444444555678999999999999999998854 5799999999999999999998876 335799999998653
Q ss_pred -C-C-----CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 232 -P-F-----ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 232 -p-~-----~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+ + .+++||+|++.... .+...+++++.++|||||++++....
T Consensus 135 l~~l~~~~~~~~~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 135 LDNLLQGQESEGSYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp HHHHHHSTTCTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred HHHHHhccCCCCCcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 2 2 15789999986432 24578899999999999999987643
No 208
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.42 E-value=5.5e-13 Score=117.82 Aligned_cols=109 Identities=16% Similarity=0.186 Sum_probs=85.4
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCCCCeEEEEecCCC-CCCCCCchhhhe
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAVH 242 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~v~~~~~d~~~-lp~~~~~fD~V~ 242 (314)
++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... +. ...+++++.+|+.. ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-DDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-TSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 567999999999999999998754569999999999999999987531 11 23689999999865 333457899999
Q ss_pred ecchhccCCC----HHHHHHHHHhhcccCcEEEEEec
Q 021344 243 AGAALHCWPS----PSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 243 ~~~vl~h~~d----~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+.....+.+. ...+++++.++|||||++++...
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8543322111 25789999999999999999863
No 209
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.41 E-value=5.9e-13 Score=118.84 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=83.6
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--cCCCCCCCeEEEEecCCC-CCCCCCchhhhe
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAVH 242 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~v~~~~~d~~~-lp~~~~~fD~V~ 242 (314)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++.. .+. ...+++++.+|+.. ++..+++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF-DDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCceEEE
Confidence 46799999999999999999885567999999999999999998753 110 13689999999755 344467899999
Q ss_pred ecchhccCC-----CHHHHHHHHHhhcccCcEEEEEec
Q 021344 243 AGAALHCWP-----SPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 243 ~~~vl~h~~-----d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+...-.++. ....+++++.++|||||++++...
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 853211021 126889999999999999999863
No 210
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.41 E-value=4.2e-13 Score=120.21 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--cCCCCCCCeEEEEecCCC-CCCCCCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ--DNTILTSNLALVRADVCR-LPFASGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--~~~~~~~~v~~~~~d~~~-lp~~~~~fD~V 241 (314)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. .+. ...+++++.+|+.+ ++..+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~-~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY-SSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc-CCCcEEEEECcHHHHHhhCCCCceEE
Confidence 456899999999999999999886667999999999999999998764 110 13689999999865 34446789999
Q ss_pred eecchhccCC----CHHHHHHHHHhhcccCcEEEEEecc
Q 021344 242 HAGAALHCWP----SPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 242 ~~~~vl~h~~----d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++.......+ ....+++++.++|||||++++....
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 9864422111 1246899999999999999987633
No 211
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.41 E-value=2.5e-13 Score=118.31 Aligned_cols=105 Identities=13% Similarity=0.113 Sum_probs=74.9
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC---CCC---CCchh
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---PFA---SGFVD 239 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l---p~~---~~~fD 239 (314)
++.+|||+|||+|.++..++...+..+|+|+|+|+.+++.|+++++..+ ...+++++++|+.+. +++ +++||
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN--LSDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC--CCccEEEEEcchhhhhhhhhhcccCCccc
Confidence 4679999999999999988887544599999999999999999998876 234699999997652 444 26899
Q ss_pred hheecchhccCC---------------CHHHHHHHHHhhcccCcEEEE
Q 021344 240 AVHAGAALHCWP---------------SPSNAVAEISRILRSGGVFVG 272 (314)
Q Consensus 240 ~V~~~~vl~h~~---------------d~~~~l~~i~r~LkpGG~l~i 272 (314)
+|+++-.+++.. ....++.++.++|||||.+.+
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 999974443322 112345666677777766544
No 212
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=6.6e-13 Score=118.77 Aligned_cols=106 Identities=13% Similarity=0.147 Sum_probs=85.2
Q ss_pred CeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC--CCCCCchhhheecc
Q 021344 168 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHAGA 245 (314)
Q Consensus 168 ~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l--p~~~~~fD~V~~~~ 245 (314)
.+|||||||+|.+++.+++..+..+++++|+++.+++.|++++... ...+++++.+|+.+. .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~---~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP---RAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC---CTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc---CCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 4999999999999999999776779999999999999999987543 236899999998653 23467899999854
Q ss_pred hhccCCC----HHHHHHHHHhhcccCcEEEEEecc
Q 021344 246 ALHCWPS----PSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 246 vl~h~~d----~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
..+.... ...+++++.++|||||++++....
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 3222111 258999999999999999988754
No 213
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.41 E-value=4.1e-13 Score=121.17 Aligned_cols=109 Identities=14% Similarity=0.148 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCCCCeEEEEecCCC-CCCCCCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~v~~~~~d~~~-lp~~~~~fD~V 241 (314)
.++.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++... +. ...+++++.+|+.+ ++..+++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY-EDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG-GSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEEccHHHHHhhcCCCceEE
Confidence 3567999999999999999998755679999999999999999987641 10 13689999999865 23335789999
Q ss_pred eecchhccCC---C--HHHHHHHHHhhcccCcEEEEEec
Q 021344 242 HAGAALHCWP---S--PSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 242 ~~~~vl~h~~---d--~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
++... +++. + ...+++++.++|||||++++...
T Consensus 194 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 194 IVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 98642 2221 1 16889999999999999999763
No 214
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.41 E-value=9.5e-13 Score=119.27 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCCCCeEEEEecCCCC-C-CCCCchhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-P-FASGFVDA 240 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~v~~~~~d~~~l-p-~~~~~fD~ 240 (314)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... +. ...+++++.+|+.+. + ..+++||+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-EDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEECCHHHHHHhccCCCccE
Confidence 4568999999999999999998865679999999999999999987642 10 136899999998653 2 33578999
Q ss_pred heecch--hccCCC--HHHHHHHHHhhcccCcEEEEEe
Q 021344 241 VHAGAA--LHCWPS--PSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 241 V~~~~v--l~h~~d--~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
|++... .++..+ ...+++++.++|||||++++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 998543 111111 3689999999999999999975
No 215
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.40 E-value=7.9e-13 Score=112.75 Aligned_cols=125 Identities=12% Similarity=0.098 Sum_probs=95.0
Q ss_pred HHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CCCC
Q 021344 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFA 234 (314)
Q Consensus 156 ~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp~~ 234 (314)
+.+.++++ ++.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++..+ ...++++..+|... ++.
T Consensus 7 ~~l~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~i~~~~~d~l~~l~~- 81 (225)
T 3kr9_A 7 ELVASFVS--QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG--LKEKIQVRLANGLAAFEE- 81 (225)
T ss_dssp HHHHTTSC--TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-
T ss_pred HHHHHhCC--CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEECchhhhccc-
Confidence 34555554 4679999999999999999999877789999999999999999999987 34579999999853 332
Q ss_pred CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccCCCCCccchHHHHHHHHh
Q 021344 235 SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLREVMLI 295 (314)
Q Consensus 235 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~~~~~~~~~~l~~~~~~ 295 (314)
.++||+|+..+.-.. -...++.+....|+++|++++.... ....++.++..
T Consensus 82 ~~~~D~IviaG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~~~--------~~~~vr~~L~~ 132 (225)
T 3kr9_A 82 TDQVSVITIAGMGGR--LIARILEEGLGKLANVERLILQPNN--------REDDLRIWLQD 132 (225)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGCTTCCEEEEEESS--------CHHHHHHHHHH
T ss_pred CcCCCEEEEcCCChH--HHHHHHHHHHHHhCCCCEEEEECCC--------CHHHHHHHHHH
Confidence 226998886543211 1357799999999999999986631 34555555543
No 216
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.40 E-value=3.6e-13 Score=121.04 Aligned_cols=108 Identities=13% Similarity=0.132 Sum_probs=82.8
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCCCCeEEEEecCCC-CCCCCCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~v~~~~~d~~~-lp~~~~~fD~V 241 (314)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... +. ...+++++.+|+.+ ++..+++||+|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~-~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGF-SHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGG-GCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcccc-CCCCEEEEEChHHHHHHhcCCCceEE
Confidence 3467999999999999999998866679999999999999999987642 10 13689999999865 33346789999
Q ss_pred eecchhccCCCH-----HHHHHHHHhhcccCcEEEEEe
Q 021344 242 HAGAALHCWPSP-----SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 242 ~~~~vl~h~~d~-----~~~l~~i~r~LkpGG~l~i~~ 274 (314)
++... +++... ..+++++.++|||||++++..
T Consensus 186 i~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98543 332211 578999999999999999976
No 217
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.40 E-value=3.2e-13 Score=119.47 Aligned_cols=97 Identities=16% Similarity=0.241 Sum_probs=73.7
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEE-EecCCCCC---CCCCchhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV-RADVCRLP---FASGFVDA 240 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~-~~d~~~lp---~~~~~fD~ 240 (314)
.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.|++.+.+. ..++... ..|+..++ ++..+||+
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~--------~~rv~~~~~~ni~~l~~~~l~~~~fD~ 154 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQ--------DDRVRSMEQYNFRYAEPVDFTEGLPSF 154 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHT--------CTTEEEECSCCGGGCCGGGCTTCCCSE
T ss_pred ccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh--------CcccceecccCceecchhhCCCCCCCE
Confidence 356799999999999999999885 35899999999999885441 1333322 23443332 23446999
Q ss_pred heecchhccCCCHHHHHHHHHhhcccCcEEEEE
Q 021344 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~ 273 (314)
|++..+++++ ..+|.++.++|||||.+++.
T Consensus 155 v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 155 ASIDVSFISL---NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEECCSSSCG---GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEeeHhhH---HHHHHHHHHHcCcCCEEEEE
Confidence 9998887754 77899999999999999987
No 218
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.39 E-value=6.2e-14 Score=120.78 Aligned_cols=108 Identities=19% Similarity=0.137 Sum_probs=71.0
Q ss_pred HHHHhcc-CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEE-ecCCCCCCCC
Q 021344 158 AQEYFKS-AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR-ADVCRLPFAS 235 (314)
Q Consensus 158 l~~~l~~-~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~-~d~~~lp~~~ 235 (314)
+.+.+.. .++.+|||||||+|.++..+++.+. .+|+|+|+|+.+++.++++..........++.++. .|+....+..
T Consensus 28 ~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 106 (232)
T 3opn_A 28 ALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSF 106 (232)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSE
T ss_pred HHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCE
Confidence 3334443 3567999999999999999999863 49999999999999877632210000001222222 2332211233
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.+||++++.. ..+++++.++|||||++++..
T Consensus 107 ~~~D~v~~~l--------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 107 TSIDVSFISL--------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp EEECCSSSCG--------GGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEEEEhhhH--------HHHHHHHHHhccCCCEEEEEE
Confidence 4566666542 678999999999999999863
No 219
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.39 E-value=1.4e-12 Score=123.53 Aligned_cols=123 Identities=17% Similarity=0.173 Sum_probs=97.2
Q ss_pred HHHHHhccC--CCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 157 MAQEYFKSA--QGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 157 ~l~~~l~~~--~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
.+...+... ++.+|||+|||+|..+..++.... ...|+++|+++.+++.++++++..+. .++.++.+|+..++.
T Consensus 106 l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv~~~~~D~~~~~~ 182 (479)
T 2frx_A 106 LPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNVALTHFDGRVFGA 182 (479)
T ss_dssp HHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCCSTTHHH
T ss_pred HHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCCHHHhhh
Confidence 444556666 789999999999999999998742 45999999999999999999988763 579999999988753
Q ss_pred -CCCchhhheec------chhccCCC----------------HHHHHHHHHhhcccCcEEEEEecccCCCCC
Q 021344 234 -ASGFVDAVHAG------AALHCWPS----------------PSNAVAEISRILRSGGVFVGTTFLRYTSST 282 (314)
Q Consensus 234 -~~~~fD~V~~~------~vl~h~~d----------------~~~~l~~i~r~LkpGG~l~i~~~~~~~~~~ 282 (314)
.+++||+|++. .++.+.++ ...+|+++.++|||||++++++.+..+..+
T Consensus 183 ~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~En 254 (479)
T 2frx_A 183 AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEEN 254 (479)
T ss_dssp HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTT
T ss_pred hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccC
Confidence 45789999972 34444333 136899999999999999999876544433
No 220
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.39 E-value=6.4e-13 Score=110.83 Aligned_cols=100 Identities=17% Similarity=0.192 Sum_probs=76.8
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCC---------CeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEE-EecCCCCC-
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTY---------SGVVALDFSENMLRQCYDFIKQDNTILTSNLALV-RADVCRLP- 232 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~---------~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~-~~d~~~lp- 232 (314)
..++.+|||+|||+|.++..+++..+. .+|+|+|+++.. ...+++++ .+|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------------cCCCCeEEEeccCCCHHH
Confidence 456889999999999999999998432 699999999831 12568888 88987643
Q ss_pred -------CCCCchhhheecchhccC----CCH-------HHHHHHHHhhcccCcEEEEEeccc
Q 021344 233 -------FASGFVDAVHAGAALHCW----PSP-------SNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 233 -------~~~~~fD~V~~~~vl~h~----~d~-------~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+++++||+|++...++.. .+. ..+++++.++|||||++++.++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 335689999986554432 233 478999999999999999987643
No 221
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.37 E-value=3.2e-12 Score=117.79 Aligned_cols=105 Identities=13% Similarity=0.035 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CCC-CCCchhhhe
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPF-ASGFVDAVH 242 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp~-~~~~fD~V~ 242 (314)
.++.+|||+| |+|.++..++..++..+|+|+|+++.+++.|+++++..+. .+++++.+|+.+ +|. .+++||+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY---EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC---CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCEEEEEChhhhhchhhccCCccEEE
Confidence 3578999999 9999999999887667999999999999999999988763 389999999988 663 356899999
Q ss_pred ecchhccCCCHHHHHHHHHhhcccCcEE-EEEe
Q 021344 243 AGAALHCWPSPSNAVAEISRILRSGGVF-VGTT 274 (314)
Q Consensus 243 ~~~vl~h~~d~~~~l~~i~r~LkpGG~l-~i~~ 274 (314)
++..+++. ....+++++.++|||||++ ++..
T Consensus 247 ~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPETLE-AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred ECCCCchH-HHHHHHHHHHHHcccCCeEEEEEE
Confidence 97654433 2478999999999999954 5544
No 222
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.37 E-value=6.4e-13 Score=119.60 Aligned_cols=112 Identities=17% Similarity=0.091 Sum_probs=87.7
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCCCCeEEEEecCCC-CCCCCCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCR-LPFASGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~v~~~~~d~~~-lp~~~~~fD~V 241 (314)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... +.....+++++.+|+.+ ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 3567999999999999999998865669999999999999999987541 10013689999999866 34446789999
Q ss_pred eecchhcc-CCC------HHHHHHHHHhhcccCcEEEEEecc
Q 021344 242 HAGAALHC-WPS------PSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 242 ~~~~vl~h-~~d------~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
++....++ ... ...+++++.++|||||++++....
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99765433 112 268899999999999999997643
No 223
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.36 E-value=2.6e-12 Score=118.32 Aligned_cols=119 Identities=15% Similarity=0.109 Sum_probs=93.5
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.......+.... ..++.+|||+|||+|.++..++..+...+++|+|+|+.+++.|+++++..+ ...+++++++|+.+
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g--l~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG--VLDKIKFIQGDATQ 279 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT--CGGGCEEEECCGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhh
Confidence 445556666666 667889999999999999999998766689999999999999999998876 23589999999999
Q ss_pred CCCCCCchhhheecchhccC----CCH----HHHHHHHHhhcccCcEEEEEe
Q 021344 231 LPFASGFVDAVHAGAALHCW----PSP----SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 231 lp~~~~~fD~V~~~~vl~h~----~d~----~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+++++++||+|+++-.+... ... ..+++++.++| ||.+++.+
T Consensus 280 ~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 280 LSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp GGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE
T ss_pred CCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE
Confidence 98877899999996443221 111 56788888888 55555555
No 224
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.36 E-value=3.2e-12 Score=112.53 Aligned_cols=127 Identities=14% Similarity=0.155 Sum_probs=97.5
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
.+.+.+. ++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.++++++.++ ...+++++.+|+.+++. .+
T Consensus 118 ri~~~~~--~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~--v~~~v~~~~~D~~~~~~-~~ 191 (278)
T 3k6r_A 118 RMAKVAK--PDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNK--VEDRMSAYNMDNRDFPG-EN 191 (278)
T ss_dssp HHHHHCC--TTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCTTTCCC-CS
T ss_pred HHHHhcC--CCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEeCcHHHhcc-cc
Confidence 4444443 58899999999999999999887 3589999999999999999999988 45789999999988763 56
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecccCCCCCccchHHHHHHH
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRYTSSTSLTGRVLREVM 293 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~~~~~~~~~~~l~~~~ 293 (314)
.||.|++.. .+....++..+.++||+||++.+.++.............+++..
T Consensus 192 ~~D~Vi~~~----p~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~ 244 (278)
T 3k6r_A 192 IADRILMGY----VVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRIT 244 (278)
T ss_dssp CEEEEEECC----CSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHH
T ss_pred CCCEEEECC----CCcHHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHH
Confidence 899998753 23456788999999999999988766543322333334444443
No 225
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.35 E-value=4e-12 Score=106.57 Aligned_cols=96 Identities=14% Similarity=0.151 Sum_probs=75.1
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
..++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.+++++ .+++++++|+.+++ ++||+|++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v~~ 116 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTWIM 116 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEEEE
Confidence 4467899999999999999999884 347999999999999999864 26899999998865 68999999
Q ss_pred cchhccCCC--HHHHHHHHHhhcccCcEEEEE
Q 021344 244 GAALHCWPS--PSNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 244 ~~vl~h~~d--~~~~l~~i~r~LkpGG~l~i~ 273 (314)
+..++|+.+ ...+++++.+++ |+++++.
T Consensus 117 ~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 117 NPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp CCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred CCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 999998865 247899999988 5544333
No 226
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.35 E-value=5.9e-13 Score=125.24 Aligned_cols=119 Identities=17% Similarity=0.156 Sum_probs=95.3
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-CC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT-YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FA 234 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-~~ 234 (314)
.+...+...++.+|||+|||+|..+..++.... ..+|+++|+++.+++.++++++..+. . +.++.+|+..++ +.
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHHH
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhhc
Confidence 445566777899999999999999999998743 35899999999999999999998873 4 899999987765 34
Q ss_pred CCchhhhee------cchhccCCCH----------------HHHHHHHHhhcccCcEEEEEecccCC
Q 021344 235 SGFVDAVHA------GAALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 235 ~~~fD~V~~------~~vl~h~~d~----------------~~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
+++||+|++ ..++.+-++. ..+|+++.++|||||+|+.++.+..+
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 678999995 2344444433 57899999999999999998866543
No 227
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.35 E-value=1.9e-12 Score=108.20 Aligned_cols=98 Identities=16% Similarity=0.268 Sum_probs=74.9
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC-------C-
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-------S- 235 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~-------~- 235 (314)
..++.+|||+|||+|.++..+++.+ .+|+|+|+++.. ...++.++++|+.+.+.. .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~--------------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME--------------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC--------------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc--------------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 4568899999999999999999984 499999999741 126899999999876521 1
Q ss_pred ---CchhhheecchhccCC-----------CHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 236 ---GFVDAVHAGAALHCWP-----------SPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 236 ---~~fD~V~~~~vl~h~~-----------d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++||+|++........ ....+++.+.++|||||.|++..+..
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 4899999864322111 12467889999999999999888643
No 228
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.34 E-value=1.7e-12 Score=114.97 Aligned_cols=107 Identities=13% Similarity=0.127 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCC------CCCCeEEEEecCCCC-CCCC
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTI------LTSNLALVRADVCRL-PFAS 235 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~------~~~~v~~~~~d~~~l-p~~~ 235 (314)
.++.+|||||||+|.++..+++. +..+++++|+++.+++.|++++ .. +.. ...+++++.+|+.+. +. +
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~ 150 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N 150 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence 35679999999999999999988 5679999999999999999987 32 100 136899999997542 22 5
Q ss_pred CchhhheecchhccCCC-----HHHHHHHHHhhcccCcEEEEEec
Q 021344 236 GFVDAVHAGAALHCWPS-----PSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d-----~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
++||+|++.... ++.. ...+++++.++|||||++++...
T Consensus 151 ~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 151 RGFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CCEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 789999986542 2211 25789999999999999999763
No 229
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.34 E-value=2.9e-13 Score=118.85 Aligned_cols=107 Identities=18% Similarity=0.168 Sum_probs=78.1
Q ss_pred hccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEE--EecCCCCCCCCCchh
Q 021344 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV--RADVCRLPFASGFVD 239 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~--~~d~~~lp~~~~~fD 239 (314)
....++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++....... ...++.++ ++|+..++ +++||
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~-~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITES-YGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCB-TTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhc-cCCCeEEEecccCHhHCC--CCCCc
Confidence 33456889999999999999999987 3899999998 43222111000000 01168999 89998876 67899
Q ss_pred hheecchhccCCCHH-------HHHHHHHhhcccCc--EEEEEecc
Q 021344 240 AVHAGAALHCWPSPS-------NAVAEISRILRSGG--VFVGTTFL 276 (314)
Q Consensus 240 ~V~~~~vl~h~~d~~-------~~l~~i~r~LkpGG--~l~i~~~~ 276 (314)
+|++..+ ++..++. .+|+++.++||||| .+++..+.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9999877 5555532 37899999999999 99997765
No 230
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.34 E-value=2.2e-13 Score=120.27 Aligned_cols=104 Identities=20% Similarity=0.227 Sum_probs=77.3
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh-cCCCCCCCeEEE--EecCCCCCCCCCchhh
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ-DNTILTSNLALV--RADVCRLPFASGFVDA 240 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-~~~~~~~~v~~~--~~d~~~lp~~~~~fD~ 240 (314)
..++.+|||+|||+|.++..+++. . +|+|+|+++ ++..+++.... .. ...++.++ ++|+..++ +++||+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~--~V~gVD~s~-m~~~a~~~~~~~~~--~~~~v~~~~~~~D~~~l~--~~~fD~ 151 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-P--NVREVKAYT-LGTSGHEKPRLVET--FGWNLITFKSKVDVTKME--PFQADT 151 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-T--TEEEEEEEC-CCCTTSCCCCCCCC--TTGGGEEEECSCCGGGCC--CCCCSE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-C--CEEEEECch-hhhhhhhchhhhhh--cCCCeEEEeccCcHhhCC--CCCcCE
Confidence 456789999999999999999988 3 899999998 53322211000 00 01278999 89998876 678999
Q ss_pred heecchhccCCCHH-------HHHHHHHhhcccCc--EEEEEecc
Q 021344 241 VHAGAALHCWPSPS-------NAVAEISRILRSGG--VFVGTTFL 276 (314)
Q Consensus 241 V~~~~vl~h~~d~~-------~~l~~i~r~LkpGG--~l~i~~~~ 276 (314)
|++..+ ++..++. .+|+++.++||||| .+++..+.
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999877 5554432 37899999999999 99987755
No 231
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.34 E-value=2.6e-12 Score=112.58 Aligned_cols=98 Identities=12% Similarity=0.081 Sum_probs=81.8
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
.+.+|||||||+|.+++.+++. + .+++++|+++.+++.|++++... +. ...+++++.+|..+.. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~-~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVK-NNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHH-TCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhcccc-CCCeEEEEechHHHHH---hhCCEEEE
Confidence 4679999999999999999988 5 79999999999999998865321 00 1368999999987654 68999998
Q ss_pred cchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 244 ~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
. ..+|..+++++.++|||||++++..
T Consensus 146 d-----~~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 146 L-----QEPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp S-----SCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C-----CCChHHHHHHHHHhcCCCcEEEEEc
Confidence 6 3577889999999999999999875
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.33 E-value=4.5e-12 Score=115.47 Aligned_cols=125 Identities=12% Similarity=0.105 Sum_probs=97.0
Q ss_pred CCCchHHHHHHHHHh----ccCCCCeEEEEcCcccHHHHHHHHhCCC-----CeEEEEeCCHHHHHHHHHHHHhcCCCCC
Q 021344 148 FPGPDEEFKMAQEYF----KSAQGGLLVDVSCGSGLFSRKFAKSGTY-----SGVVALDFSENMLRQCYDFIKQDNTILT 218 (314)
Q Consensus 148 ~~~~~~~~~~l~~~l----~~~~~~~iLDiGcG~G~~~~~l~~~~~~-----~~v~giD~s~~~~~~a~~~~~~~~~~~~ 218 (314)
++++......+...+ ...++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++...+
T Consensus 108 ~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g---- 183 (344)
T 2f8l_A 108 QMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR---- 183 (344)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT----
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC----
Confidence 466666655544443 3445679999999999999998877532 589999999999999999888765
Q ss_pred CCeEEEEecCCCCCCCCCchhhheecchhccCCCHH------------------HHHHHHHhhcccCcEEEEEeccc
Q 021344 219 SNLALVRADVCRLPFASGFVDAVHAGAALHCWPSPS------------------NAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 219 ~~v~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~------------------~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.++.++++|.... ...++||+|+++-.+.++++.. .++..+.+.|||||++++..+..
T Consensus 184 ~~~~i~~~D~l~~-~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 184 QKMTLLHQDGLAN-LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CCCEEEESCTTSC-CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CCceEEECCCCCc-cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 3689999998653 3457899999987766654332 57999999999999999988654
No 233
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.32 E-value=1.7e-11 Score=103.16 Aligned_cols=100 Identities=14% Similarity=0.195 Sum_probs=81.8
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
..++.+|||+|||+|.++..+++.+. .+++|+|+++.+++.++++++..+ .+++++.+|+.+++ ++||+|++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---~~~D~v~~ 118 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFK----GKFKVFIGDVSEFN---SRVDIVIM 118 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGT----TSEEEEESCGGGCC---CCCSEEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcC----CCEEEEECchHHcC---CCCCEEEE
Confidence 44678999999999999999998863 479999999999999999887765 38999999998864 48999999
Q ss_pred cchhccCC--CHHHHHHHHHhhcccCcEEEEE
Q 021344 244 GAALHCWP--SPSNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 244 ~~vl~h~~--d~~~~l~~i~r~LkpGG~l~i~ 273 (314)
+..+++.. ....+++++.+++ ||.+++.
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 87776654 3357889999988 5555444
No 234
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.32 E-value=3e-12 Score=110.15 Aligned_cols=114 Identities=14% Similarity=0.121 Sum_probs=93.4
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
....+.+.+ .+..+|||||||+|-++..+....+..+|+++|+++.+++.+++++...+ .+..+...|....+
T Consensus 122 fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g----~~~~~~v~D~~~~~- 194 (281)
T 3lcv_B 122 FYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN----VPHRTNVADLLEDR- 194 (281)
T ss_dssp HHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT----CCEEEEECCTTTSC-
T ss_pred HHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeeecccC-
Confidence 333344444 34779999999999999999888788899999999999999999998876 56889999987655
Q ss_pred CCCchhhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEec
Q 021344 234 ASGFVDAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+.++||+|++.-+++|+.+-. ..+ ++...|+++|+++-...
T Consensus 195 p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 457899999999999996553 345 89999999999987654
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.31 E-value=4.6e-12 Score=117.62 Aligned_cols=111 Identities=17% Similarity=0.178 Sum_probs=89.1
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC----CCCchhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDA 240 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~----~~~~fD~ 240 (314)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+++++..++. ..+++++.+|+.+... ..++||+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~-~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLD-LSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCC-GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 467899999999999999999986 459999999999999999999887610 2389999999866421 1468999
Q ss_pred heecc---------hhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 241 VHAGA---------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 241 V~~~~---------vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
|++.- +.++..+...++.++.+.|+|||++++.+...
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99852 23333556788999999999999999988554
No 236
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.30 E-value=1.2e-12 Score=113.55 Aligned_cols=113 Identities=9% Similarity=0.157 Sum_probs=84.2
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++.. ..+++++.+|+.+
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~ 87 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQ 87 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGG
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHh
Confidence 345566777777777788999999999999999999975 999999999999999987653 2589999999998
Q ss_pred CCCCC-Cchhhhe----------ecchhccCCCHHHHH----HHHHhhcccCcEE
Q 021344 231 LPFAS-GFVDAVH----------AGAALHCWPSPSNAV----AEISRILRSGGVF 270 (314)
Q Consensus 231 lp~~~-~~fD~V~----------~~~vl~h~~d~~~~l----~~i~r~LkpGG~l 270 (314)
+++++ ..|++|. ....++|...+..++ +.+.|++++||.+
T Consensus 88 ~~~~~~~~~~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l 142 (244)
T 1qam_A 88 FKFPKNQSYKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSL 142 (244)
T ss_dssp CCCCSSCCCEEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHH
T ss_pred CCcccCCCeEEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcch
Confidence 88764 4554332 123444544444444 4477788888754
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.30 E-value=7.5e-12 Score=106.73 Aligned_cols=102 Identities=14% Similarity=0.110 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.++.+|||||||.|.++..+. +..+++|+|+++.+++.+++++...+ .+..+..+|....+.+ ++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g----~~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD----WDFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT----CEEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeecccCCCC-CCcchHHHH
Confidence 457899999999999999888 45699999999999999999987765 7889999999887754 589999999
Q ss_pred chhccCCCHH-HHHHHHHhhcccCcEEEEEe
Q 021344 245 AALHCWPSPS-NAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 245 ~vl~h~~d~~-~~l~~i~r~LkpGG~l~i~~ 274 (314)
-++||+.+.. ....++...|+++|+++-..
T Consensus 176 k~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 176 KLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp SCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 7777775332 23338888999998776554
No 238
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.29 E-value=2.4e-12 Score=119.01 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=85.8
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCC-CeEEEEecCCCC-CC---CCCchh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NLALVRADVCRL-PF---ASGFVD 239 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~-~v~~~~~d~~~l-p~---~~~~fD 239 (314)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+++++..++ .. +++++++|+.+. +. ..++||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~--~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHL--DMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTC--CCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHHhCCCcc
Confidence 457899999999999999999865 34899999999999999999988763 23 899999998652 21 245899
Q ss_pred hheecchh-----ccCCCH----HHHHHHHHhhcccCcEEEEEeccc
Q 021344 240 AVHAGAAL-----HCWPSP----SNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 240 ~V~~~~vl-----~h~~d~----~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+|++.-.. .+..+. ..+++.+.++|+|||++++.+...
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99984322 233333 356778899999999999988544
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.29 E-value=1.7e-12 Score=121.99 Aligned_cols=120 Identities=15% Similarity=0.146 Sum_probs=94.0
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-CC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FA 234 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-~~ 234 (314)
.+...+...++.+|||+|||+|..+..++... ...+|+++|+++.+++.++++++..+. .++.++.+|+..++ ..
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPHF 172 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhhc
Confidence 45556677789999999999999999998763 235899999999999999999998873 57999999987664 23
Q ss_pred CCchhhheec------chhccCCCH----------------HHHHHHHHhhcccCcEEEEEecccCC
Q 021344 235 SGFVDAVHAG------AALHCWPSP----------------SNAVAEISRILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 235 ~~~fD~V~~~------~vl~h~~d~----------------~~~l~~i~r~LkpGG~l~i~~~~~~~ 279 (314)
+++||+|++. .++.+-++. ..+|+++.++|||||+++.+|.+-.+
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 5789999973 233321111 26799999999999999998866543
No 240
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.29 E-value=4.5e-12 Score=117.74 Aligned_cols=109 Identities=16% Similarity=0.142 Sum_probs=88.4
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC----CCCchhhh
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAV 241 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~----~~~~fD~V 241 (314)
++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|+++++..++ ..+++++.+|+.+... ..++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGV--EDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 57899999999999999999875 34899999999999999999988763 2389999999866431 25689999
Q ss_pred eecc---------hhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 242 HAGA---------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 242 ~~~~---------vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++.- +.++..+...++.++.++|||||++++.+...
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 9842 22333445678999999999999999988654
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.27 E-value=2.8e-12 Score=118.54 Aligned_cols=107 Identities=20% Similarity=0.235 Sum_probs=86.5
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC----CCCchhhh
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDAV 241 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~----~~~~fD~V 241 (314)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+++++..+. .+++++.+|+.+... .+++||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~n~~---~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARLNGL---GNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHHTTC---TTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCC---CCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 57799999999999999999884 4899999999999999999988763 459999999876421 15689999
Q ss_pred eecch---------hccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 242 HAGAA---------LHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 242 ~~~~v---------l~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++.-. .+...+...++.++.++|+|||++++.+...
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 98421 1222334678999999999999999988654
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.26 E-value=1e-11 Score=122.93 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=89.4
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CCCCCCchhhheec
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASGFVDAVHAG 244 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp~~~~~fD~V~~~ 244 (314)
++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|+++++..++ ...+++++++|+.+ ++...++||+|++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl-~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTC-CSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCC-CccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 578999999999999999998764 4799999999999999999998873 11479999999876 34446789999984
Q ss_pred c-----------hhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 245 A-----------ALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 245 ~-----------vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
- ++++..+...+++.+.++|||||++++.+...
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 3 23333455678999999999999999888553
No 243
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=1.2e-11 Score=114.45 Aligned_cols=107 Identities=16% Similarity=0.063 Sum_probs=82.9
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-CCCCchhhheec
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-FASGFVDAVHAG 244 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-~~~~~fD~V~~~ 244 (314)
++.+|||+|||+|.++..+++.+. .|+++|+|+.+++.++++++..+. ...+.++|+.+.. ...+.||+|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~----~~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGL----RVDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC----CCEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCC----CCcEEEccHHHHHHHhcCCCCEEEEC
Confidence 488999999999999999999876 699999999999999999988773 2356688876532 213449999985
Q ss_pred chh---------ccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 245 AAL---------HCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 245 ~vl---------~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
-.. ....+...+++.+.++|||||++++.+.+..
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 321 1112335789999999999999998886543
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.23 E-value=1.1e-11 Score=110.79 Aligned_cols=88 Identities=16% Similarity=0.259 Sum_probs=70.4
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++...+ ..+++++.+|+.++
T Consensus 28 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~~---~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYEG---YNNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHTT---CCCEEC----CCSS
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcC---CCceEEEECchhhC
Confidence 45566777777777888999999999999999998865 99999999999999999887654 26899999999888
Q ss_pred CCCCCchhhheecch
Q 021344 232 PFASGFVDAVHAGAA 246 (314)
Q Consensus 232 p~~~~~fD~V~~~~v 246 (314)
++. +||+|+++..
T Consensus 103 ~~~--~~D~Vv~n~p 115 (299)
T 2h1r_A 103 VFP--KFDVCTANIP 115 (299)
T ss_dssp CCC--CCSEEEEECC
T ss_pred Ccc--cCCEEEEcCC
Confidence 754 7999998643
No 245
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.22 E-value=3.6e-11 Score=109.15 Aligned_cols=102 Identities=20% Similarity=0.201 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.++.+|||+|||+|.++.. ++ + ..+|+|+|+|+.+++.++++++..+ ...++.++.+|+.+.. ++||+|++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~-~~~V~~vD~s~~ai~~a~~n~~~n~--l~~~v~~~~~D~~~~~---~~fD~Vi~d 265 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-N-AKKIYAIDINPHAIELLKKNIKLNK--LEHKIIPILSDVREVD---VKGNRVIMN 265 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-T-SSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGCC---CCEEEEEEC
T ss_pred CCCCEEEEccCccCHHHHh-cc-C-CCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECChHHhc---CCCcEEEEC
Confidence 3578999999999999999 77 3 4599999999999999999999876 2358999999998765 789999985
Q ss_pred chhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 245 ~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
-.- ....+++.+.++|+|||++++.++...
T Consensus 266 pP~----~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 266 LPK----FAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp CTT----TGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CcH----hHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 221 123789999999999999999887654
No 246
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.22 E-value=7.4e-11 Score=110.74 Aligned_cols=112 Identities=16% Similarity=0.220 Sum_probs=86.9
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC---
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR--- 230 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~--- 230 (314)
..+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++++..++ .++.++.+|+.+
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~--~V~gvD~s~~al~~A~~n~~~~~~---~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAA--SVVGVEGVPALVEKGQQNARLNGL---QNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSS--EEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCTTSCCS
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCC--EEEEEeCCHHHHHHHHHHHHHcCC---CceEEEECCHHHHhh
Confidence 455566666666778999999999999999998854 999999999999999999988763 589999999977
Q ss_pred -CCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 231 -LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 231 -lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+++.+++||+|++.---.-. ..+++.+.+ ++|+++++++.
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEES
T ss_pred hhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEEC
Confidence 34566789999984221111 245555543 78999888866
No 247
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.22 E-value=2.3e-11 Score=114.56 Aligned_cols=128 Identities=15% Similarity=0.135 Sum_probs=101.6
Q ss_pred CCCCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-------------CCCeEEEEeCCHHHHHHHHHHHHhc
Q 021344 147 GFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-------------TYSGVVALDFSENMLRQCYDFIKQD 213 (314)
Q Consensus 147 ~~~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-------------~~~~v~giD~s~~~~~~a~~~~~~~ 213 (314)
.++++....+.+.+.+...++.+|||+|||+|.++..+.+.. ...+++|+|+++.+++.|+.++...
T Consensus 152 ~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~ 231 (445)
T 2okc_A 152 QYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH 231 (445)
T ss_dssp GGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT
T ss_pred cccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh
Confidence 367888899999999888788899999999999998887652 1247999999999999999988776
Q ss_pred CCCCCCCeEEEEecCCCCCCCCCchhhheecchhccCCC-----------------HHHHHHHHHhhcccCcEEEEEecc
Q 021344 214 NTILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWPS-----------------PSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 214 ~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d-----------------~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+. ...++.+.++|....+.. ++||+|+++-.+.+... ...+++.+.+.|||||++++..+.
T Consensus 232 g~-~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 232 GI-GTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp TC-CSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CC-CcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 63 011678899998776643 48999999755544321 137899999999999999988854
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.21 E-value=5.1e-14 Score=122.31 Aligned_cols=113 Identities=11% Similarity=0.167 Sum_probs=88.1
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
..+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++.. ..+++++.+|+.++++
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~--~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISK--QVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQF 89 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSS--EEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCC--eEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCc
Confidence 445667777777788999999999999999999874 999999999999988876541 2589999999999887
Q ss_pred CC-Cchhhheec-----------chhccCCCHHHHH----HHHHhhcccCcEEEEEe
Q 021344 234 AS-GFVDAVHAG-----------AALHCWPSPSNAV----AEISRILRSGGVFVGTT 274 (314)
Q Consensus 234 ~~-~~fD~V~~~-----------~vl~h~~d~~~~l----~~i~r~LkpGG~l~i~~ 274 (314)
++ ++| .|+++ .+++|..+...++ +.+.++|||||.+++..
T Consensus 90 ~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 90 PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 63 678 45543 2344555555566 77999999999877654
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.21 E-value=2.5e-12 Score=115.13 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=74.1
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeC----CHHHHHHHHHHHHhcCCCCCCCeEEEEe-cCCCCCCCCCch
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDF----SENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASGFV 238 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~----s~~~~~~a~~~~~~~~~~~~~~v~~~~~-d~~~lp~~~~~f 238 (314)
..++.+|||+|||+|.++..+++.+ +|+|+|+ ++.+++... .+.. ...++.++++ |+..++ .++|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~~---~V~gvD~~~~~~~~~~~~~~--~~~~---~~~~v~~~~~~D~~~l~--~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGLK---NVREVKGLTKGGPGHEEPIP--MSTY---GWNLVRLQSGVDVFFIP--PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTST---TEEEEEEECCCSTTSCCCCC--CCST---TGGGEEEECSCCTTTSC--CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhcC---CEEEEeccccCchhHHHHHH--hhhc---CCCCeEEEeccccccCC--cCCC
Confidence 3467899999999999999999882 8999999 554332111 0000 1157899999 888775 5689
Q ss_pred hhheecchhc---cCCCHH---HHHHHHHhhcccCcEEEEEecc
Q 021344 239 DAVHAGAALH---CWPSPS---NAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 239 D~V~~~~vl~---h~~d~~---~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
|+|++..+++ +..+.. .+|+++.++|||||.+++..+.
T Consensus 150 D~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 150 DTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred CEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 9999976653 222222 4789999999999999987654
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.17 E-value=2.5e-10 Score=106.69 Aligned_cols=100 Identities=17% Similarity=0.172 Sum_probs=79.6
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++++..++ . ++++.+|+.++.. .+||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~ngl---~-v~~~~~d~~~~~~--~~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEINNV---D-AEFEVASDREVSV--KGFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC---C-EEEEECCTTTCCC--TTCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChHHcCc--cCCCEEEE
Confidence 44678999999999999999998865 999999999999999999987763 3 9999999988653 28999998
Q ss_pred cchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 244 ~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.-.-... ...+++.+. .|+|||+++++.
T Consensus 360 dPPr~g~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 360 DPPRAGL--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCCTTCS--CHHHHHHHH-HHCCSEEEEEES
T ss_pred cCCccch--HHHHHHHHH-hcCCCcEEEEEC
Confidence 5332111 134566664 589999999976
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.16 E-value=9.6e-11 Score=104.09 Aligned_cols=89 Identities=12% Similarity=0.225 Sum_probs=77.0
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++... .+++++++|+.+
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~~-----~~v~vi~gD~l~ 107 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKELY-----NNIEIIWGDALK 107 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHHC-----SSEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhccC-----CCeEEEECchhh
Confidence 345667788888888889999999999999999999865 9999999999999999988732 689999999999
Q ss_pred CCCCCCchhhheecch
Q 021344 231 LPFASGFVDAVHAGAA 246 (314)
Q Consensus 231 lp~~~~~fD~V~~~~v 246 (314)
+++++.+||+|+++..
T Consensus 108 ~~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 108 VDLNKLDFNKVVANLP 123 (295)
T ss_dssp SCGGGSCCSEEEEECC
T ss_pred CCcccCCccEEEEeCc
Confidence 8888878999997643
No 252
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.14 E-value=1.6e-10 Score=106.87 Aligned_cols=123 Identities=11% Similarity=0.034 Sum_probs=94.3
Q ss_pred CchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCC--------------------------------------C
Q 021344 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY--------------------------------------S 191 (314)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~--------------------------------------~ 191 (314)
-.+.....+.......++..|||++||+|.++..++..+.+ .
T Consensus 185 l~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 185 IKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp CCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 34556667777777777889999999999999888876432 4
Q ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecchhc-cC---CCHHHHHHHHHhhccc-
Q 021344 192 GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CW---PSPSNAVAEISRILRS- 266 (314)
Q Consensus 192 ~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~---~d~~~~l~~i~r~Lkp- 266 (314)
+|+|+|+++.+++.|+++++..+ ...+++++++|+.+++.+ ++||+|+++--.. .+ .+...+++++.+.||+
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAG--LGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTT--CTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred eEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 69999999999999999999887 345799999999888764 5899999972211 11 1234567777777776
Q ss_pred -CcEEEEEec
Q 021344 267 -GGVFVGTTF 275 (314)
Q Consensus 267 -GG~l~i~~~ 275 (314)
||.+++.+.
T Consensus 342 ~g~~~~iit~ 351 (393)
T 3k0b_A 342 PTWSVYVLTS 351 (393)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 999988884
No 253
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.13 E-value=3e-10 Score=104.68 Aligned_cols=122 Identities=13% Similarity=0.070 Sum_probs=95.2
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCC--------------------------------------Ce
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY--------------------------------------SG 192 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~--------------------------------------~~ 192 (314)
.+.....+.......++..+||.+||+|.++..++..+.+ .+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 4556666777777777889999999999999988876442 46
Q ss_pred EEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecchhc-cCC---CHHHHHHHHHhhccc--
Q 021344 193 VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CWP---SPSNAVAEISRILRS-- 266 (314)
Q Consensus 193 v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~~---d~~~~l~~i~r~Lkp-- 266 (314)
++|+|+++.+++.|+++++..+ ....++++++|+.+++.+ ++||+|+++--.. .+. +...+++++.+.||+
T Consensus 259 v~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVG--LEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred EEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999887 345799999999988764 4899999973221 122 234677777778876
Q ss_pred CcEEEEEec
Q 021344 267 GGVFVGTTF 275 (314)
Q Consensus 267 GG~l~i~~~ 275 (314)
||.+++.+.
T Consensus 336 g~~~~iit~ 344 (384)
T 3ldg_A 336 TWSQFILTN 344 (384)
T ss_dssp TSEEEEEES
T ss_pred CcEEEEEEC
Confidence 999998884
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.12 E-value=1.6e-10 Score=106.65 Aligned_cols=122 Identities=14% Similarity=0.074 Sum_probs=94.9
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCC--------------------------------------Ce
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY--------------------------------------SG 192 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~--------------------------------------~~ 192 (314)
.+.....+.......++..|||+|||+|.++..++..+.+ .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 4556667777777777889999999999999998876432 47
Q ss_pred EEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecchhc-cC---CCHHHHHHHHHhhccc--
Q 021344 193 VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH-CW---PSPSNAVAEISRILRS-- 266 (314)
Q Consensus 193 v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~---~d~~~~l~~i~r~Lkp-- 266 (314)
|+|+|+++.+++.|++++...+. ..++++.++|+.+++.+ ++||+|+++--.. .+ .+...+++++.+.||+
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl--~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGV--DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTC--GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred EEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999998772 35799999999887754 5899999954321 11 2334677777778877
Q ss_pred CcEEEEEec
Q 021344 267 GGVFVGTTF 275 (314)
Q Consensus 267 GG~l~i~~~ 275 (314)
||.+++.+.
T Consensus 337 g~~~~iit~ 345 (385)
T 3ldu_A 337 NWSYYLITS 345 (385)
T ss_dssp SCEEEEEES
T ss_pred CCEEEEEEC
Confidence 888888884
No 255
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.12 E-value=5.1e-10 Score=100.22 Aligned_cols=118 Identities=12% Similarity=0.075 Sum_probs=86.9
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS 235 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~ 235 (314)
.+...+...++.+|||+|||+|..+..++.. +...+|+++|+++.+++.++++++..+. .++.++.+|+.+++...
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~---~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV---SCCELAEEDFLAVSPSD 169 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGSCTTC
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEeCChHhcCccc
Confidence 4445667778899999999999999999886 3346999999999999999999998763 68999999987765322
Q ss_pred ---Cchhhheec------chhccCCC-----------H-------HHHHHHHHhhcccCcEEEEEecccC
Q 021344 236 ---GFVDAVHAG------AALHCWPS-----------P-------SNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 236 ---~~fD~V~~~------~vl~h~~d-----------~-------~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
++||.|++. .++..-+| . ..+|+.+.++|+ ||+++.++.+-.
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 479999962 23332111 1 145777777787 999988876543
No 256
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.12 E-value=7.8e-11 Score=109.95 Aligned_cols=119 Identities=18% Similarity=0.210 Sum_probs=90.7
Q ss_pred CCCCCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEE
Q 021344 146 SGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224 (314)
Q Consensus 146 ~~~~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~ 224 (314)
..+..+....+.+.+.+...++.+|||+|||+|.++..++++. ...+++|+|+++.+++.| .++.++
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~ 86 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGI 86 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEE
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEE
Confidence 3456778888888888876567799999999999999999863 356999999999887655 368899
Q ss_pred EecCCCCCCCCCchhhheecchh---c-------cCCCH-------------------HHHHHHHHhhcccCcEEEEEec
Q 021344 225 RADVCRLPFASGFVDAVHAGAAL---H-------CWPSP-------------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 225 ~~d~~~lp~~~~~fD~V~~~~vl---~-------h~~d~-------------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
++|+...+. .++||+|+++-.. . |+.+. ..+++.+.++|+|||++++..+
T Consensus 87 ~~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 87 LADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp ESCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 999877543 4689999994111 1 12111 2568999999999999999886
Q ss_pred cc
Q 021344 276 LR 277 (314)
Q Consensus 276 ~~ 277 (314)
..
T Consensus 166 ~~ 167 (421)
T 2ih2_A 166 AT 167 (421)
T ss_dssp GG
T ss_pred hH
Confidence 54
No 257
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.08 E-value=1.7e-10 Score=104.39 Aligned_cols=110 Identities=12% Similarity=0.128 Sum_probs=82.1
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCC-----CCCCCeEEEEecCCCCCC----CCC
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT-----ILTSNLALVRADVCRLPF----ASG 236 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~-----~~~~~v~~~~~d~~~lp~----~~~ 236 (314)
++.+|||||||+|.+++.+++.++ .+|+++|+++.+++.|++++..... +...+++++.+|+...-- .++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 568999999999999999999875 7899999999999999998753210 001279999999866321 357
Q ss_pred chhhheecchh-ccCC-----CHHHHHHHH----HhhcccCcEEEEEecc
Q 021344 237 FVDAVHAGAAL-HCWP-----SPSNAVAEI----SRILRSGGVFVGTTFL 276 (314)
Q Consensus 237 ~fD~V~~~~vl-~h~~-----d~~~~l~~i----~r~LkpGG~l~i~~~~ 276 (314)
+||+|++...- ..-. -...+++.+ .++|+|||++++...+
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 89999986422 1111 224677777 8999999999988743
No 258
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.05 E-value=2.9e-10 Score=104.52 Aligned_cols=112 Identities=15% Similarity=0.221 Sum_probs=83.8
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
.....+.+.+... +.+|||+|||+|.++..+++... +|+|+|+++.+++.|+++++..++ .+++++.+|+.+..
T Consensus 201 ~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~ng~---~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 201 QMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAANHI---DNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHTTC---CSEEEECCCSHHHH
T ss_pred HHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcCC---CceEEEECCHHHHH
Confidence 3445555555543 57899999999999999998654 999999999999999999988763 68999999986542
Q ss_pred --CCC--------------CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 --FAS--------------GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 --~~~--------------~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+.. .+||+|++.--- ..+..++.+.|+++|.++..+.+
T Consensus 275 ~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 275 QAMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp HHHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEESC
T ss_pred HHHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEECC
Confidence 111 379999863110 12356677788899998887743
No 259
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.05 E-value=5.8e-10 Score=97.09 Aligned_cols=85 Identities=12% Similarity=0.196 Sum_probs=71.3
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.. ..+++++++|+.++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHhC
Confidence 45667788888888889999999999999999999874 999999999999999998764 26899999999988
Q ss_pred CCCC----Cchhhheec
Q 021344 232 PFAS----GFVDAVHAG 244 (314)
Q Consensus 232 p~~~----~~fD~V~~~ 244 (314)
++++ +.|| |+++
T Consensus 88 ~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 88 DFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CGGGSCCSSCEE-EEEE
T ss_pred CHHHhccCCCeE-EEec
Confidence 7643 4688 4443
No 260
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.01 E-value=4e-10 Score=99.75 Aligned_cols=96 Identities=13% Similarity=-0.010 Sum_probs=70.2
Q ss_pred ccCCCCeEEEEcC------cccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEE-EEecCCCCCCC
Q 021344 163 KSAQGGLLVDVSC------GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLAL-VRADVCRLPFA 234 (314)
Q Consensus 163 ~~~~~~~iLDiGc------G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~-~~~d~~~lp~~ 234 (314)
...++.+|||+|| |+|. ..+++. +...+|+|+|+++. + .++++ +++|+.++++.
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------------~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------------SDADSTLIGDCATVHTA 121 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------CSSSEEEESCGGGCCCS
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------CCCEEEEECccccCCcc
Confidence 4567889999999 5576 334444 33569999999987 1 35778 99999887764
Q ss_pred CCchhhheecchhc--------cC---CCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 235 SGFVDAVHAGAALH--------CW---PSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 235 ~~~fD~V~~~~vl~--------h~---~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
++||+|++....+ +. .....+++++.++|||||.+++..+..
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred -CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 6899999864321 11 112478999999999999999977543
No 261
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.99 E-value=6.2e-10 Score=107.09 Aligned_cols=129 Identities=11% Similarity=0.015 Sum_probs=99.6
Q ss_pred CCCCCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC------------------CCeEEEEeCCHHHHHHHH
Q 021344 146 SGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT------------------YSGVVALDFSENMLRQCY 207 (314)
Q Consensus 146 ~~~~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~------------------~~~v~giD~s~~~~~~a~ 207 (314)
+.++++....+.+.+.+.+.++.+|||.+||+|.++..+.+... ...++|+|+++.+++.|+
T Consensus 149 G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp -CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 44788888889999988888888999999999999988776410 137999999999999999
Q ss_pred HHHHhcCCCCCCC-----eEEEEecCCCCC-CCCCchhhheecchhccCCC--------------HHHHHHHHHhhcccC
Q 021344 208 DFIKQDNTILTSN-----LALVRADVCRLP-FASGFVDAVHAGAALHCWPS--------------PSNAVAEISRILRSG 267 (314)
Q Consensus 208 ~~~~~~~~~~~~~-----v~~~~~d~~~lp-~~~~~fD~V~~~~vl~h~~d--------------~~~~l~~i~r~LkpG 267 (314)
.++...+. .. +.+.++|....+ ...++||+|+++-.+..... ...++..+.+.||||
T Consensus 229 ~nl~l~gi---~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 305 (541)
T 2ar0_A 229 MNCLLHDI---EGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG 305 (541)
T ss_dssp HHHHTTTC---CCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred HHHHHhCC---CccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC
Confidence 98877653 22 788999986643 34568999998643332211 237899999999999
Q ss_pred cEEEEEeccc
Q 021344 268 GVFVGTTFLR 277 (314)
Q Consensus 268 G~l~i~~~~~ 277 (314)
|++.+..+..
T Consensus 306 Gr~a~V~p~~ 315 (541)
T 2ar0_A 306 GRAAVVVPDN 315 (541)
T ss_dssp EEEEEEEEHH
T ss_pred CEEEEEecCc
Confidence 9999888543
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.99 E-value=5.3e-10 Score=102.87 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=82.4
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc---------------CCCCCCCeEEEEecCCC
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD---------------NTILTSNLALVRADVCR 230 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~~~~v~~~~~d~~~ 230 (314)
++.+|||+|||+|.++..+++..+..+|+++|+++.+++.++++++.. +. .+++++++|+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl---~~i~v~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE---KTIVINHDDANR 123 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS---SEEEEEESCHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC---CceEEEcCcHHH
Confidence 578999999999999999999854568999999999999999999887 52 349999999865
Q ss_pred CCC-CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 231 LPF-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 231 lp~-~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+.. ..++||+|+..- ...+..+++.+.+.||+||+++++.
T Consensus 124 ~~~~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 LMAERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 421 135799999532 1234688999999999999888764
No 263
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.98 E-value=5.3e-10 Score=99.64 Aligned_cols=88 Identities=16% Similarity=0.275 Sum_probs=72.3
Q ss_pred HHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-
Q 021344 154 EFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP- 232 (314)
Q Consensus 154 ~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp- 232 (314)
..+.+.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|+++++..+ .++.++++|+.+++
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g----~~v~~v~~d~~~l~~ 89 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS----DRVSLFKVSYREADF 89 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT----TTEEEEECCGGGHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCHHHHHH
Confidence 3445566777778899999999999999999998656699999999999999999987754 68999999998765
Q ss_pred -CCC---Cchhhheecc
Q 021344 233 -FAS---GFVDAVHAGA 245 (314)
Q Consensus 233 -~~~---~~fD~V~~~~ 245 (314)
+.. ++||.|++..
T Consensus 90 ~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 90 LLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHTTCSCEEEEEEEC
T ss_pred HHHhcCCCCCCEEEEcC
Confidence 221 5799998753
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.98 E-value=7.7e-10 Score=97.10 Aligned_cols=86 Identities=16% Similarity=0.194 Sum_probs=72.0
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.....+.+.+.+...++ +|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.. .+++++++|+.+
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~~------~~v~vi~~D~l~ 102 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLSG------LPVRLVFQDALL 102 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTTT------SSEEEEESCGGG
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCC------CCEEEEECChhh
Confidence 34566778888888788 999999999999999999875 999999999999999987642 589999999988
Q ss_pred CCCCCC-chhhheecc
Q 021344 231 LPFASG-FVDAVHAGA 245 (314)
Q Consensus 231 lp~~~~-~fD~V~~~~ 245 (314)
+++++. .+|.|+++-
T Consensus 103 ~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 103 YPWEEVPQGSLLVANL 118 (271)
T ss_dssp SCGGGSCTTEEEEEEE
T ss_pred CChhhccCccEEEecC
Confidence 877543 688877754
No 265
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.92 E-value=1.6e-09 Score=99.82 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCCCCCCC-eEEEEecCCCCC--CCCCchhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSN-LALVRADVCRLP--FASGFVDA 240 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~-v~~~~~d~~~lp--~~~~~fD~ 240 (314)
.++.+|||++||+|.++..+++...+ .+|+++|+++.+++.++++++..++ ..+ ++++.+|+.+.- ...++||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl--~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI--PEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 45789999999999999999986322 4899999999999999999998873 234 999999985431 12457999
Q ss_pred heecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 241 VHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 241 V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
|++.- ...+..+++.+.+.|++||+++++.
T Consensus 129 V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99854 2234678999999999999888765
No 266
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.92 E-value=7.4e-09 Score=91.28 Aligned_cols=111 Identities=14% Similarity=0.252 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCCCCeEEEEecCCCC-CCCCCchhhh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PFASGFVDAV 241 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~v~~~~~d~~~l-p~~~~~fD~V 241 (314)
...++||-||.|.|..++.+.+..+..+++.+|+++..++.+++.+... +.....+++++.+|.... .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4577999999999999999999876679999999999999999987531 111347899999998663 3446789999
Q ss_pred eecchh-----ccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 242 HAGAAL-----HCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 242 ~~~~vl-----~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+....= .++ -...+++.+++.|+|||+++...-+
T Consensus 162 i~D~~dp~~~~~~L-~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCTDPIGPGESL-FTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCCCCCCTTCCS-SCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhh-cCHHHHHHHHHHhCCCCEEEEecCC
Confidence 975321 011 1147899999999999999987633
No 267
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.87 E-value=1.9e-08 Score=96.62 Aligned_cols=165 Identities=15% Similarity=0.040 Sum_probs=114.9
Q ss_pred hhhHHHHHHhHHHhc-----ccCCCCCchHHHHHHHHHhc----cCCCCeEEEEcCcccHHHHHHHHhC---CCCeEEEE
Q 021344 129 PFVSFLYERGWRQNF-----NRSGFPGPDEEFKMAQEYFK----SAQGGLLVDVSCGSGLFSRKFAKSG---TYSGVVAL 196 (314)
Q Consensus 129 ~~~s~~~~~~w~~~~-----~~~~~~~~~~~~~~l~~~l~----~~~~~~iLDiGcG~G~~~~~l~~~~---~~~~v~gi 196 (314)
+.+...|+....+.. ..+.++++....+.+.+.+. ..++.+|||.+||+|.++..+.+.. ....++|+
T Consensus 175 D~lG~~YE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~ 254 (542)
T 3lkd_A 175 DMLGDAYEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQ 254 (542)
T ss_dssp THHHHHHHHHHHHHHCC---CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEE
Confidence 445555655444322 23457889999999999887 4567899999999999988887763 24589999
Q ss_pred eCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC--C-CCCCchhhheecchh--cc-----------------CC---
Q 021344 197 DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--P-FASGFVDAVHAGAAL--HC-----------------WP--- 251 (314)
Q Consensus 197 D~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l--p-~~~~~fD~V~~~~vl--~h-----------------~~--- 251 (314)
|+++.+.+.|+.++...+. ...++.+.++|.... | ....+||+|+++=-+ .. ++
T Consensus 255 Eid~~~~~lA~~Nl~l~gi-~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s 333 (542)
T 3lkd_A 255 ELNTSTYNLARMNMILHGV-PIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKS 333 (542)
T ss_dssp ESCHHHHHHHHHHHHHTTC-CGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTT
T ss_pred ECcHHHHHHHHHHHHHcCC-CcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCc
Confidence 9999999999998877663 114688999998765 3 346789999975111 00 11
Q ss_pred C-HHHHHHHHHhhcc-cCcEEEEEecccCCCCCccchHHHHHHHHh
Q 021344 252 S-PSNAVAEISRILR-SGGVFVGTTFLRYTSSTSLTGRVLREVMLI 295 (314)
Q Consensus 252 d-~~~~l~~i~r~Lk-pGG~l~i~~~~~~~~~~~~~~~~l~~~~~~ 295 (314)
+ .-.++..+.+.|| |||++.+..+...-.. .-....+++++..
T Consensus 334 ~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~-~~~~~~iRk~Lle 378 (542)
T 3lkd_A 334 KADFAFLLHGYYHLKQDNGVMAIVLPHGVLFR-GNAEGTIRKALLE 378 (542)
T ss_dssp CCHHHHHHHHHHTBCTTTCEEEEEEETHHHHC-CTHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhCCCceeEEEEecchHhhC-CchhHHHHHHHHh
Confidence 1 1258999999999 9999998886542111 1123556666543
No 268
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.85 E-value=1e-08 Score=101.58 Aligned_cols=126 Identities=14% Similarity=0.055 Sum_probs=91.0
Q ss_pred CCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC----------------------------------------
Q 021344 149 PGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG---------------------------------------- 188 (314)
Q Consensus 149 ~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~---------------------------------------- 188 (314)
+-.+.....+.......++..|||.+||+|.++..++..+
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 3345566677777777778899999999999998887652
Q ss_pred --CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC--CCCCCchhhheecchhc-cCC---CHHHHHHHH
Q 021344 189 --TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--PFASGFVDAVHAGAALH-CWP---SPSNAVAEI 260 (314)
Q Consensus 189 --~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l--p~~~~~fD~V~~~~vl~-h~~---d~~~~l~~i 260 (314)
+..+++|+|+++.+++.|++++...+. ...+++.++|+.++ |...++||+|+++=-.. .+. +...+++.+
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv--~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l 330 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGI--GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLL 330 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHH
Confidence 124799999999999999999999873 45699999999876 33344899999972211 111 223444444
Q ss_pred ---HhhcccCcEEEEEecc
Q 021344 261 ---SRILRSGGVFVGTTFL 276 (314)
Q Consensus 261 ---~r~LkpGG~l~i~~~~ 276 (314)
.+.+.|||.+++.+..
T Consensus 331 ~~~lk~~~~g~~~~ilt~~ 349 (703)
T 3v97_A 331 GRIMKNQFGGWNLSLFSAS 349 (703)
T ss_dssp HHHHHHHCTTCEEEEEESC
T ss_pred HHHHHhhCCCCeEEEEeCC
Confidence 4445589999998853
No 269
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.85 E-value=4.3e-09 Score=101.15 Aligned_cols=147 Identities=14% Similarity=0.039 Sum_probs=104.0
Q ss_pred CCCCCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCC---------------CCeEEEEeCCHHHHHHHHHHH
Q 021344 146 SGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGT---------------YSGVVALDFSENMLRQCYDFI 210 (314)
Q Consensus 146 ~~~~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~---------------~~~v~giD~s~~~~~~a~~~~ 210 (314)
+.++++...++++.+.+...++ +|||.+||+|.++..+.+... ...++|+|+++.+++.|+.++
T Consensus 225 G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl 303 (544)
T 3khk_A 225 GQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNM 303 (544)
T ss_dssp TTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHH
T ss_pred CeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHH
Confidence 4578999999999999887655 999999999999887754310 348999999999999999988
Q ss_pred HhcCCCCCCCeEEEEecCCCCC-CCCCchhhheecchhcc-------------------------CC---C-HHHHHHHH
Q 021344 211 KQDNTILTSNLALVRADVCRLP-FASGFVDAVHAGAALHC-------------------------WP---S-PSNAVAEI 260 (314)
Q Consensus 211 ~~~~~~~~~~v~~~~~d~~~lp-~~~~~fD~V~~~~vl~h-------------------------~~---d-~~~~l~~i 260 (314)
...++ ..++.+.++|....+ +.+.+||+|+++=-+.. ++ + .-.++..+
T Consensus 304 ~l~gi--~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 304 VIRGI--DFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp HHTTC--CCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred HHhCC--CcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 87763 234444788875544 45678999998522211 11 1 12689999
Q ss_pred HhhcccCcEEEEEecccCCCCCccchHHHHHHHHh
Q 021344 261 SRILRSGGVFVGTTFLRYTSSTSLTGRVLREVMLI 295 (314)
Q Consensus 261 ~r~LkpGG~l~i~~~~~~~~~~~~~~~~l~~~~~~ 295 (314)
.+.|||||++.+..+...-....-....+++++..
T Consensus 382 l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle 416 (544)
T 3khk_A 382 LYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVE 416 (544)
T ss_dssp HHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHH
T ss_pred HHHhccCceEEEEecchhhhcCcchHHHHHHHHHh
Confidence 99999999999888543211111234556666543
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.84 E-value=5.2e-10 Score=97.65 Aligned_cols=89 Identities=17% Similarity=0.154 Sum_probs=67.3
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCH-------HHHHHHHHHHHhcCCCCCCCeEEEEecCC
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSE-------NMLRQCYDFIKQDNTILTSNLALVRADVC 229 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~-------~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 229 (314)
.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++ .+++.|+++.+..+. ..+++++++|+.
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~--~~ri~~~~~d~~ 149 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQDT--AARINLHFGNAA 149 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHHHH--HTTEEEEESCHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhhCC--ccCeEEEECCHH
Confidence 334444455678999999999999999999864 999999999 999999887665441 245999999987
Q ss_pred CC-C-CCC--Cchhhheecchhcc
Q 021344 230 RL-P-FAS--GFVDAVHAGAALHC 249 (314)
Q Consensus 230 ~l-p-~~~--~~fD~V~~~~vl~h 249 (314)
+. + +++ ++||+|++.-.+.|
T Consensus 150 ~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 150 EQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHHhhhccCCCccEEEECCCCCC
Confidence 63 3 333 68999999655544
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.83 E-value=6.9e-08 Score=80.62 Aligned_cols=111 Identities=8% Similarity=0.073 Sum_probs=80.1
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC---
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL--- 231 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l--- 231 (314)
.+++...+. +.++||||||| +.+..+++.. +.+|+.+|.++...+.|+++++..+.....+++++.+|+.+.
T Consensus 21 ~~~L~~~l~--~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~w 95 (202)
T 3cvo_A 21 AEALRMAYE--EAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDW 95 (202)
T ss_dssp HHHHHHHHH--HCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGG
T ss_pred HHHHHHHhh--CCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcc
Confidence 344444333 46799999985 6667777642 569999999999999999999987621147899999997542
Q ss_pred ------------C--------C-CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 232 ------------P--------F-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 232 ------------p--------~-~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+ . ..++||+|+...-. ....+..+.+.|+|||++++-.+
T Consensus 96 g~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 96 GHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp GCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEETTG
T ss_pred cccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEeCC
Confidence 1 1 13689999987632 23556667799999999966543
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.83 E-value=1.6e-08 Score=87.76 Aligned_cols=76 Identities=17% Similarity=0.388 Sum_probs=64.3
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL 231 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l 231 (314)
....+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++.+++.++++ . ..+++++++|+.++
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~------~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G------DERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C------CTTEEEECSCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c------CCCeEEEEcchhhC
Confidence 4456677778887788999999999999999999985 34999999999999999876 1 25899999999998
Q ss_pred CCCC
Q 021344 232 PFAS 235 (314)
Q Consensus 232 p~~~ 235 (314)
++++
T Consensus 89 ~~~~ 92 (249)
T 3ftd_A 89 PFCS 92 (249)
T ss_dssp CGGG
T ss_pred ChhH
Confidence 8764
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.82 E-value=7.9e-09 Score=100.21 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=72.6
Q ss_pred CCeEEEEcCcccHHHHHHHH---hC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhe
Q 021344 167 GGLLVDVSCGSGLFSRKFAK---SG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~---~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~ 242 (314)
...|||||||+|-+.....+ .+ ...+|++||.++ +...+++..+.++ ...+|+++.+|++++..+ +++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~--~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEE--WGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHT--TGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhcc--CCCeEEEEeCcceeccCC-cccCEEE
Confidence 35799999999988444333 32 223789999998 5567777777777 468899999999998765 6799999
Q ss_pred ecc----hhccCCCHHHHHHHHHhhcccCcEEE
Q 021344 243 AGA----ALHCWPSPSNAVAEISRILRSGGVFV 271 (314)
Q Consensus 243 ~~~----vl~h~~d~~~~l~~i~r~LkpGG~l~ 271 (314)
+-. .++- .-+ ..+....|.|||||+++
T Consensus 434 SEwMG~fLl~E-~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNE-LSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGG-CHH-HHHHHHGGGEEEEEEEE
T ss_pred EEcCccccccc-CCH-HHHHHHHHhcCCCcEEc
Confidence 721 1222 123 57888899999999864
No 274
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.78 E-value=1e-08 Score=90.39 Aligned_cols=77 Identities=14% Similarity=0.209 Sum_probs=64.4
Q ss_pred hHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCC
Q 021344 152 DEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY--SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (314)
Q Consensus 152 ~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~--~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 229 (314)
....+.+.+.+...++.+|||||||+|.++..+++.+.. .+|+|+|+++.+++.++++. . .+++++++|+.
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~----~~v~~i~~D~~ 100 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---G----ELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G----GGEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C----CCcEEEECChh
Confidence 455667778888788899999999999999999998751 23999999999999999873 2 58999999999
Q ss_pred CCCCCC
Q 021344 230 RLPFAS 235 (314)
Q Consensus 230 ~lp~~~ 235 (314)
++++++
T Consensus 101 ~~~~~~ 106 (279)
T 3uzu_A 101 TFDFGS 106 (279)
T ss_dssp GCCGGG
T ss_pred cCChhH
Confidence 887653
No 275
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.77 E-value=5e-09 Score=90.75 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=74.6
Q ss_pred hccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhh
Q 021344 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 241 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V 241 (314)
....++.+|||+|||+|.|++.+++..+...++|+|++.+....... ... ...++..+..++....+..+.||+|
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~-~~~----~g~~ii~~~~~~dv~~l~~~~~DlV 144 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMN-VQS----LGWNIITFKDKTDIHRLEPVKCDTL 144 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCC-CCB----TTGGGEEEECSCCTTTSCCCCCSEE
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccc-cCc----CCCCeEEEeccceehhcCCCCccEE
Confidence 44567789999999999999988876434478888887442100000 000 0125566677766566777899999
Q ss_pred eecchhccCCCHH-------HHHHHHHhhcccC-cEEEEEeccc
Q 021344 242 HAGAALHCWPSPS-------NAVAEISRILRSG-GVFVGTTFLR 277 (314)
Q Consensus 242 ~~~~vl~h~~d~~-------~~l~~i~r~LkpG-G~l~i~~~~~ 277 (314)
++..+.+ ..... .+|+.+.++|||| |.+++-.+..
T Consensus 145 lsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 145 LCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp EECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred EecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 9976555 33321 3568889999999 9999987653
No 276
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.71 E-value=2.1e-08 Score=91.75 Aligned_cols=109 Identities=16% Similarity=0.084 Sum_probs=75.1
Q ss_pred CCeEEEEcCcccHHHHHHHHh-----------------CCCCeEEEEeCC-----------HHHHHHHHHHHHhcCCCCC
Q 021344 167 GGLLVDVSCGSGLFSRKFAKS-----------------GTYSGVVALDFS-----------ENMLRQCYDFIKQDNTILT 218 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~-----------------~~~~~v~giD~s-----------~~~~~~a~~~~~~~~~~~~ 218 (314)
..+|+|+||++|.++..+... .+..+|+..|+- +...+.+++ ..+ ..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g--~~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENG--RK 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTC--CC
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hcc--CC
Confidence 468999999999988777654 244678888876 333332222 111 11
Q ss_pred CCeEEEEecC---CCCCCCCCchhhheecchhccCCCHH---------------------------------------HH
Q 021344 219 SNLALVRADV---CRLPFASGFVDAVHAGAALHCWPSPS---------------------------------------NA 256 (314)
Q Consensus 219 ~~v~~~~~d~---~~lp~~~~~fD~V~~~~vl~h~~d~~---------------------------------------~~ 256 (314)
.+..|+.+.- ....|++++||+|+++.+|||+.+.. .+
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 2345555543 34568899999999999999986542 12
Q ss_pred HHHHHhhcccCcEEEEEecccCCC
Q 021344 257 VAEISRILRSGGVFVGTTFLRYTS 280 (314)
Q Consensus 257 l~~i~r~LkpGG~l~i~~~~~~~~ 280 (314)
|+..++.|+|||+++++...+...
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHhccCCeEEEEEecCCCc
Confidence 666689999999999999887553
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.68 E-value=6.6e-09 Score=90.26 Aligned_cols=75 Identities=8% Similarity=0.148 Sum_probs=59.5
Q ss_pred HHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC
Q 021344 153 EEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP 232 (314)
Q Consensus 153 ~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp 232 (314)
...+.+.+.+...++.+|||||||+|.++. +.+ +...+|+++|+++.+++.+++++.. ..+++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~-----~~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL-----GPKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT-----GGGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc-----CCceEEEECchhhCC
Confidence 445567777777788899999999999999 654 5422399999999999999986543 147999999998877
Q ss_pred CC
Q 021344 233 FA 234 (314)
Q Consensus 233 ~~ 234 (314)
++
T Consensus 81 ~~ 82 (252)
T 1qyr_A 81 FG 82 (252)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 278
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.68 E-value=5.9e-08 Score=88.72 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=76.6
Q ss_pred CCeEEEEcCcccHHHHHHH--------HhC-------CCCeEEEEeCCHHHHHHHHHHHHhcC-----------CC-CCC
Q 021344 167 GGLLVDVSCGSGLFSRKFA--------KSG-------TYSGVVALDFSENMLRQCYDFIKQDN-----------TI-LTS 219 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~--------~~~-------~~~~v~giD~s~~~~~~a~~~~~~~~-----------~~-~~~ 219 (314)
..+|+|+|||+|.++..+. +.. +..+|+.-|+-.+.....=+.+.... .. ...
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999999887762 221 45688888876655433333332210 00 001
Q ss_pred CeEEEEecCCCCCCCCCchhhheecchhccCCC--------------------------------------HHHHHHHHH
Q 021344 220 NLALVRADVCRLPFASGFVDAVHAGAALHCWPS--------------------------------------PSNAVAEIS 261 (314)
Q Consensus 220 ~v~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d--------------------------------------~~~~l~~i~ 261 (314)
=+..+-+.+....+++++||+|+++.+||++.+ ...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333445455678999999999999999873 334688899
Q ss_pred hhcccCcEEEEEecccCC
Q 021344 262 RILRSGGVFVGTTFLRYT 279 (314)
Q Consensus 262 r~LkpGG~l~i~~~~~~~ 279 (314)
+.|+|||+++++...+..
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHEEEEEEEEEEEEECCC
T ss_pred HHhCCCCEEEEEEecCCC
Confidence 999999999999987754
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.63 E-value=4.6e-08 Score=94.94 Aligned_cols=101 Identities=10% Similarity=0.112 Sum_probs=72.2
Q ss_pred CCeEEEEcCcccHHHHHHHH----hC---------CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC
Q 021344 167 GGLLVDVSCGSGLFSRKFAK----SG---------TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF 233 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~----~~---------~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~ 233 (314)
...|||||||+|-+...... .+ ...+|++||.++.++...+.+.. .+ ...+|+++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng--~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT--WKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT--TTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC--CCCeEEEEeCchhhccc
Confidence 45799999999998643211 12 23489999999988776666555 34 35779999999998766
Q ss_pred C-----CCchhhheecchhccCCC---HHHHHHHHHhhcccCcEEE
Q 021344 234 A-----SGFVDAVHAGAALHCWPS---PSNAVAEISRILRSGGVFV 271 (314)
Q Consensus 234 ~-----~~~fD~V~~~~vl~h~~d---~~~~l~~i~r~LkpGG~l~ 271 (314)
+ .+++|+|++-.. ..+.+ -...|..+.+.|||||+++
T Consensus 487 p~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 578999997432 22221 2357888889999999865
No 280
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.62 E-value=2.5e-08 Score=92.19 Aligned_cols=74 Identities=12% Similarity=0.159 Sum_probs=63.1
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc--CCCCCCCeEEEEecCCCC-CC-CCCchhhh
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD--NTILTSNLALVRADVCRL-PF-ASGFVDAV 241 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--~~~~~~~v~~~~~d~~~l-p~-~~~~fD~V 241 (314)
++.+|||+|||+|..+..+++.+. +|+++|+|+.+++.|+++++.. +. .+++++++|+.+. +. .+++||+|
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~gl---~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNEG---KDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCTT---CEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccCC---CcEEEEECcHHHhhhhccCCCceEE
Confidence 378999999999999999998865 9999999999999999999876 52 6899999999763 32 23579999
Q ss_pred eec
Q 021344 242 HAG 244 (314)
Q Consensus 242 ~~~ 244 (314)
++.
T Consensus 168 ~lD 170 (410)
T 3ll7_A 168 YVD 170 (410)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.62 E-value=1.8e-08 Score=87.59 Aligned_cols=109 Identities=17% Similarity=0.056 Sum_probs=72.2
Q ss_pred HHHHHhccCCC--CeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC--CCC----CCCeEEEEecC
Q 021344 157 MAQEYFKSAQG--GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN--TIL----TSNLALVRADV 228 (314)
Q Consensus 157 ~l~~~l~~~~~--~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--~~~----~~~v~~~~~d~ 228 (314)
.+.+.+...++ .+|||+|||+|..+..++..+. +|+++|.++.+.+.+++.++... ... ..+++++++|.
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 45556655566 8999999999999999999875 89999999988777766554321 000 14699999998
Q ss_pred CC-CCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCc
Q 021344 229 CR-LPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGG 268 (314)
Q Consensus 229 ~~-lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG 268 (314)
.+ ++...++||+|++.-.+.+- .....+++..++|++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCC-CC-----HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 65 33223469999997666553 22244555555555543
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.50 E-value=4.2e-07 Score=89.59 Aligned_cols=149 Identities=15% Similarity=0.138 Sum_probs=94.5
Q ss_pred CCCCCchHHHHHHHHH----hcc--CCCCeEEEEcCcccHHHHHHHHhCC---CCeEEEEeCCHHHHHHH--HHHHHhcC
Q 021344 146 SGFPGPDEEFKMAQEY----FKS--AQGGLLVDVSCGSGLFSRKFAKSGT---YSGVVALDFSENMLRQC--YDFIKQDN 214 (314)
Q Consensus 146 ~~~~~~~~~~~~l~~~----l~~--~~~~~iLDiGcG~G~~~~~l~~~~~---~~~v~giD~s~~~~~~a--~~~~~~~~ 214 (314)
+.++.+....+.+... +.. .++.+|||.|||+|.++..+++... ..+++|+|+++.+++.| +.++....
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 4467888888887776 322 3577999999999999999988753 34799999999999999 44433211
Q ss_pred CCC-CCCeEEEEecCCCC-CCCCCchhhheecchhcc-CC---------------------------C-HHHHHHHHHhh
Q 021344 215 TIL-TSNLALVRADVCRL-PFASGFVDAVHAGAALHC-WP---------------------------S-PSNAVAEISRI 263 (314)
Q Consensus 215 ~~~-~~~v~~~~~d~~~l-p~~~~~fD~V~~~~vl~h-~~---------------------------d-~~~~l~~i~r~ 263 (314)
... .....+...|+... +...++||+|+++=-.-. .. + ...++..+.+.
T Consensus 375 LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~l 454 (878)
T 3s1s_A 375 LVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTEL 454 (878)
T ss_dssp TCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHH
T ss_pred hhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHh
Confidence 100 12234555555442 234568999998522200 00 1 23578889999
Q ss_pred cccCcEEEEEecccCCCCCccchHHHHHHHH
Q 021344 264 LRSGGVFVGTTFLRYTSSTSLTGRVLREVML 294 (314)
Q Consensus 264 LkpGG~l~i~~~~~~~~~~~~~~~~l~~~~~ 294 (314)
||+||++.+..+...-....-....+++++.
T Consensus 455 LKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LL 485 (878)
T 3s1s_A 455 VQDGTVISAIMPKQYLTAQGNESKAFREFLV 485 (878)
T ss_dssp SCTTCEEEEEEETHHHHCCSHHHHHHHHHHT
T ss_pred cCCCcEEEEEEChHHhccCChHHHHHHHHHH
Confidence 9999999999865421101111345666554
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.50 E-value=4.4e-08 Score=84.97 Aligned_cols=110 Identities=17% Similarity=0.109 Sum_probs=72.5
Q ss_pred hccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhh
Q 021344 162 FKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 241 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V 241 (314)
....++.+|||+|||+|.|++.+++..+...++|+|++.++...+... .. ...++..+..+.....+..+++|+|
T Consensus 86 ~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~----~g~~ii~~~~~~dv~~l~~~~~DvV 160 (282)
T 3gcz_A 86 GYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TT----LGWNLIRFKDKTDVFNMEVIPGDTL 160 (282)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CB----TTGGGEEEECSCCGGGSCCCCCSEE
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-cc----CCCceEEeeCCcchhhcCCCCcCEE
Confidence 355678899999999999999988764445789999986532111100 00 0123444444333334456789999
Q ss_pred eecchhccCCCHH-------HHHHHHHhhcccC--cEEEEEeccc
Q 021344 242 HAGAALHCWPSPS-------NAVAEISRILRSG--GVFVGTTFLR 277 (314)
Q Consensus 242 ~~~~vl~h~~d~~-------~~l~~i~r~LkpG--G~l~i~~~~~ 277 (314)
++..+.. ..... .+|+-+.++|||| |.|++-.+..
T Consensus 161 LSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 161 LCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp EECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred EecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 9987655 43321 3577778999999 9999988663
No 284
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.49 E-value=7.4e-08 Score=87.47 Aligned_cols=112 Identities=13% Similarity=0.135 Sum_probs=80.4
Q ss_pred CCeEEEEcCcccHHHHHHHHh----------------CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEE---ec
Q 021344 167 GGLLVDVSCGSGLFSRKFAKS----------------GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR---AD 227 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~----------------~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~---~d 227 (314)
.-+|+|+||++|.++..+... .+..+|+..|.-.+....+-+.+.... ...+..|+. +.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~--~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--DVDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--SCTTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc--ccCCCEEEEecchh
Confidence 457999999999866544332 345688999998877777666544311 001234444 44
Q ss_pred CCCCCCCCCchhhheecchhccCCCH---------------------------------HHHHHHHHhhcccCcEEEEEe
Q 021344 228 VCRLPFASGFVDAVHAGAALHCWPSP---------------------------------SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~---------------------------------~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+....|+++++|+|+++.+|||+.+. ..+|+..++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 55567889999999999999998652 135888999999999999999
Q ss_pred cccCCC
Q 021344 275 FLRYTS 280 (314)
Q Consensus 275 ~~~~~~ 280 (314)
..+...
T Consensus 210 ~gr~~~ 215 (359)
T 1m6e_X 210 LGRRSE 215 (359)
T ss_dssp EECSSS
T ss_pred ecCCCC
Confidence 887543
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.49 E-value=4e-07 Score=82.82 Aligned_cols=130 Identities=12% Similarity=0.050 Sum_probs=97.5
Q ss_pred HHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCC---CCCCeEEEEecCCCCC-
Q 021344 157 MAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTI---LTSNLALVRADVCRLP- 232 (314)
Q Consensus 157 ~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~---~~~~v~~~~~d~~~lp- 232 (314)
+....+...++.+|||+.+|.|.-+.+++..+....++++|+++..+...+++++..+.. ...++.+...|...++
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 445567788899999999999999999988876668999999999999999988875421 1257888888887654
Q ss_pred CCCCchhhheec----c----hhccCCC------H----------HHHHHHHHhhcccCcEEEEEecccCCCCCccch
Q 021344 233 FASGFVDAVHAG----A----ALHCWPS------P----------SNAVAEISRILRSGGVFVGTTFLRYTSSTSLTG 286 (314)
Q Consensus 233 ~~~~~fD~V~~~----~----vl~h~~d------~----------~~~l~~i~r~LkpGG~l~i~~~~~~~~~~~~~~ 286 (314)
...+.||.|++. . ++..-++ + ..+|....+.|||||+|+-+|-+-.+..+....
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV 296 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVV 296 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHH
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHH
Confidence 345689999952 2 2221111 1 257888999999999999999887766664433
No 286
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=98.45 E-value=6.9e-08 Score=65.15 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=38.7
Q ss_pred CCCeeeccCCCccchhcCCCCccccccccCceecCCCCccccCccceeeeecccC
Q 021344 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (314)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (314)
..++++||+|+++|..... .+.+.|+.|+..|++++|+++++....
T Consensus 7 LLeiL~CP~ck~~L~~~~~---------~g~LvC~~c~~~YPI~dGIPvmL~~Ea 52 (67)
T 2jny_A 7 LLEVLACPKDKGPLRYLES---------EQLLVNERLNLAYRIDDGIPVLLIDEA 52 (67)
T ss_dssp GTCCCBCTTTCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCSSCC
T ss_pred HHHHhCCCCCCCcCeEeCC---------CCEEEcCCCCccccCCCCEeeeChhHh
Confidence 4578999999999876432 378999999999999999999997643
No 287
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=98.43 E-value=8.5e-08 Score=65.02 Aligned_cols=46 Identities=17% Similarity=0.214 Sum_probs=38.6
Q ss_pred CCCeeeccCCCccchhcCCCCccccccccCceecCCCCccccCccceeeeecccC
Q 021344 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (314)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (314)
.+++++||.|+++|..... .+.+.|+.|+..|++++|+++++....
T Consensus 5 LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~Ea 50 (68)
T 2jr6_A 5 FLDILVCPVTKGRLEYHQD---------KQELWSRQAKLAYPIKDGIPYMLENEA 50 (68)
T ss_dssp SSCCCBCSSSCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCTTTC
T ss_pred HhhheECCCCCCcCeEeCC---------CCEEEcCCCCcEecCCCCeeeeChhhc
Confidence 4678999999999876432 378999999999999999999997643
No 288
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=98.42 E-value=9e-08 Score=65.29 Aligned_cols=46 Identities=15% Similarity=0.314 Sum_probs=38.9
Q ss_pred CCCeeeccCCCccchhcCCCCccccccccCceecCCCCccccCccceeeeecccC
Q 021344 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (314)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (314)
.+++++||.|+++|..... .+.+.|+.|+..|++++|+++++....
T Consensus 5 LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~Ea 50 (70)
T 2js4_A 5 LLDILVCPVCKGRLEFQRA---------QAELVCNADRLAFPVRDGVPIMLEAEA 50 (70)
T ss_dssp CCCCCBCTTTCCBEEEETT---------TTEEEETTTTEEEEEETTEECCCGGGS
T ss_pred HhhheECCCCCCcCEEeCC---------CCEEEcCCCCceecCCCCeeeeChhhc
Confidence 4578999999999876432 378999999999999999999998743
No 289
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=98.41 E-value=8.2e-08 Score=65.09 Aligned_cols=46 Identities=17% Similarity=0.399 Sum_probs=38.5
Q ss_pred CCCeeeccCCCccchhcCCCCccccccccCceecCCCCccccCccceeeeecccC
Q 021344 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (314)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (314)
.+++++||.|+++|..... .+.+.|+.|+..|++++|+++++....
T Consensus 5 LL~iL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~Ea 50 (68)
T 2hf1_A 5 FLEILVCPLCKGPLVFDKS---------KDELICKGDRLAFPIKDGIPMMLESEA 50 (68)
T ss_dssp CEEECBCTTTCCBCEEETT---------TTEEEETTTTEEEEEETTEECCCGGGC
T ss_pred HhhheECCCCCCcCeEeCC---------CCEEEcCCCCcEecCCCCeeeeChhhc
Confidence 3578999999999876432 378999999999999999999997643
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.41 E-value=1.7e-07 Score=81.45 Aligned_cols=108 Identities=17% Similarity=0.091 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCcccHHHHHHHHh-------CCC-----CeEEEEeCCH---HHHH-----------HHHHHHHhcC----
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKS-------GTY-----SGVVALDFSE---NMLR-----------QCYDFIKQDN---- 214 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~-------~~~-----~~v~giD~s~---~~~~-----------~a~~~~~~~~---- 214 (314)
.+..+|||||+|+|..+..+.+. .+. .+++++|..+ +.+. .+++.++.-.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34578999999999988776543 442 4899999876 4443 4555554300
Q ss_pred ------CC-CCCCeEEEEecCCC-CCCCC----Cchhhheecc-hhccCCC--HHHHHHHHHhhcccCcEEEE
Q 021344 215 ------TI-LTSNLALVRADVCR-LPFAS----GFVDAVHAGA-ALHCWPS--PSNAVAEISRILRSGGVFVG 272 (314)
Q Consensus 215 ------~~-~~~~v~~~~~d~~~-lp~~~----~~fD~V~~~~-vl~h~~d--~~~~l~~i~r~LkpGG~l~i 272 (314)
.. ...+++++.+|+.+ ++..+ ..||+|+... .-..-++ -..+++.+.++|||||+|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 00 12568899999865 44322 2799999853 2111111 24789999999999999885
No 291
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=98.40 E-value=9.7e-08 Score=64.93 Aligned_cols=46 Identities=20% Similarity=0.387 Sum_probs=38.3
Q ss_pred CCCeeeccCCCccchhcCCCCccccccccCceecCCCCccccCccceeeeecccC
Q 021344 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (314)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (314)
.+++++||.|+++|..... .+.+.|+.|+..|++++|+++++....
T Consensus 5 LLeiL~CP~ck~~L~~~~~---------~~~LiC~~cg~~YPI~dGIPvmL~~ea 50 (69)
T 2pk7_A 5 LLDILACPICKGPLKLSAD---------KTELISKGAGLAYPIRDGIPVMLESEA 50 (69)
T ss_dssp GGGTCCCTTTCCCCEECTT---------SSEEEETTTTEEEEEETTEECCCGGGC
T ss_pred HHhheeCCCCCCcCeEeCC---------CCEEEcCCCCcEecCcCCeeeeChhhc
Confidence 3578999999999876432 378999999999999999999997643
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.34 E-value=6.8e-07 Score=78.55 Aligned_cols=109 Identities=12% Similarity=0.083 Sum_probs=80.7
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhC-----CCCeEEEEeCCHH--------------------------HHHHHHHHHHh
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSG-----TYSGVVALDFSEN--------------------------MLRQCYDFIKQ 212 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~-----~~~~v~giD~s~~--------------------------~~~~a~~~~~~ 212 (314)
....+.|||+|+..|..+..++... ++.+++++|..+. .++.++++++.
T Consensus 104 ~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 104 NNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred cCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 3456799999999999888776542 3668999996421 36678888888
Q ss_pred cCCCCCCCeEEEEecCCC-CC-CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 213 DNTILTSNLALVRADVCR-LP-FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 213 ~~~~~~~~v~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.+. ...+++++.+|+.+ +| +++++||+|+...-. .......|+.+.+.|+|||++++-++
T Consensus 184 ~gl-~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 184 YDL-LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TTC-CSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred cCC-CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 762 13789999999854 33 335689999987532 11234679999999999999988775
No 293
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.34 E-value=9.4e-07 Score=80.00 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=68.6
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
..+|.++||+||++|.++..+.+++. +|++||+.+-. .... ...+|.++++|+.....+.+.||+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~l~-~~l~---------~~~~V~~~~~d~~~~~~~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGPMA-QSLM---------DTGQVTWLREDGFKFRPTRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSCCC-HHHH---------TTTCEEEECSCTTTCCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhhcC-hhhc---------cCCCeEEEeCccccccCCCCCcCEEEE
Confidence 35689999999999999999999976 99999987521 1111 137899999999887766778999999
Q ss_pred cchhccCCCHHHHHHHHHhhcccC
Q 021344 244 GAALHCWPSPSNAVAEISRILRSG 267 (314)
Q Consensus 244 ~~vl~h~~d~~~~l~~i~r~LkpG 267 (314)
..+ .+|...+.-+.+.|..|
T Consensus 277 Dm~----~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 277 DMV----EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp CCS----SCHHHHHHHHHHHHHTT
T ss_pred cCC----CChHHhHHHHHHHHhcc
Confidence 765 45777777777766665
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.30 E-value=4.9e-06 Score=79.74 Aligned_cols=163 Identities=17% Similarity=0.140 Sum_probs=109.4
Q ss_pred hhhHHHHHHhHHHhc----ccCCCCCchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhC-------------CCC
Q 021344 129 PFVSFLYERGWRQNF----NRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSG-------------TYS 191 (314)
Q Consensus 129 ~~~s~~~~~~w~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~-------------~~~ 191 (314)
+.....|+...++.. ..+.+++|..+++++.+.+.+.++.+|+|.+||+|.|+..+.++. ...
T Consensus 176 d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~ 255 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQES 255 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhh
Confidence 344555665544321 124489999999999999999889999999999999987765531 124
Q ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC----CCchhhheecchhc---------cCC------C
Q 021344 192 GVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA----SGFVDAVHAGAALH---------CWP------S 252 (314)
Q Consensus 192 ~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~----~~~fD~V~~~~vl~---------h~~------d 252 (314)
.++|+|+++.+...|+-++--++. ....+..+|....|.. ..+||+|+++=-+. .++ +
T Consensus 256 ~i~G~E~~~~~~~la~mNl~lhg~---~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~ 332 (530)
T 3ufb_A 256 SIFGGEAKSLPYLLVQMNLLLHGL---EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAE 332 (530)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHTC---SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCB
T ss_pred hhhhhhccHHHHHHHHHHHHhcCC---ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccch
Confidence 699999999999999987777663 3456777887655432 34799999853221 111 1
Q ss_pred H-HHHHHHHHhhcc-------cCcEEEEEecccCCCCCccchHHHHHHHHh
Q 021344 253 P-SNAVAEISRILR-------SGGVFVGTTFLRYTSSTSLTGRVLREVMLI 295 (314)
Q Consensus 253 ~-~~~l~~i~r~Lk-------pGG~l~i~~~~~~~~~~~~~~~~l~~~~~~ 295 (314)
. ..++..+.+.|| +||++.+..+...-.. .-....+++++..
T Consensus 333 ~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~-~~~~~~iRk~Lle 382 (530)
T 3ufb_A 333 TAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFS-DGISARIKEELLK 382 (530)
T ss_dssp HHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHC-CTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhc-cchHHHHHHHHhh
Confidence 1 246788888887 7999999886532111 1123445666543
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.28 E-value=1.3e-06 Score=79.44 Aligned_cols=108 Identities=12% Similarity=0.156 Sum_probs=78.9
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcC-----CCCCCCeEEEEecCCCC----CCCCC
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDN-----TILTSNLALVRADVCRL----PFASG 236 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----~~~~~~v~~~~~d~~~l----p~~~~ 236 (314)
++++||-||.|.|..++++.+... .+++.+|+++..++.+++.+.... .+...+++++.+|.... .-..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 467999999999999999998764 689999999999999999764311 01124688999997542 12346
Q ss_pred chhhheecchhcc-CCCH---------HHHHHHHHhhcccCcEEEEEe
Q 021344 237 FVDAVHAGAALHC-WPSP---------SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 237 ~fD~V~~~~vl~h-~~d~---------~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+||+|+....-.. -.+| ..+++.+.++|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 7999997532111 1122 367899999999999998765
No 296
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=98.25 E-value=4e-07 Score=59.28 Aligned_cols=43 Identities=26% Similarity=0.580 Sum_probs=37.2
Q ss_pred CCCeeeccCCCccchhcCCCCccccccccCceecC--CCCccccCccceeeeeccc
Q 021344 57 EGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCR--KCDKTYSSKDNYLDLTVIS 110 (314)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~--~C~~~~~~~~g~~~~~~~~ 110 (314)
..++++||.|+++|.... +.+.|. .|+..|++++|++.++.+.
T Consensus 7 lL~iL~CP~c~~~L~~~~-----------~~L~C~~~~c~~~YPI~dGIPvlL~~e 51 (56)
T 2kpi_A 7 LLEILACPACHAPLEERD-----------AELICTGQDCGLAYPVRDGIPVLLVDE 51 (56)
T ss_dssp CTTSCCCSSSCSCEEEET-----------TEEEECSSSCCCEEEEETTEECCCTTT
T ss_pred HHhheeCCCCCCcceecC-----------CEEEcCCcCCCcEEeeECCEeeeCHHH
Confidence 457899999999986643 689999 9999999999999998754
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.22 E-value=1.8e-06 Score=75.25 Aligned_cols=80 Identities=20% Similarity=0.325 Sum_probs=64.8
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC--
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-- 232 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-- 232 (314)
.+.+.+.+...+++.+||.+||.|..+..+++. +.+|+|+|.++.+++.+++ ++. .++.++++++.+++
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRH 81 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHH
Confidence 345666777778899999999999999999998 3499999999999999998 532 58999999998764
Q ss_pred ---CCCCchhhhee
Q 021344 233 ---FASGFVDAVHA 243 (314)
Q Consensus 233 ---~~~~~fD~V~~ 243 (314)
...++||.|++
T Consensus 82 L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 82 LAALGVERVDGILA 95 (285)
T ss_dssp HHHTTCSCEEEEEE
T ss_pred HHHcCCCCcCEEEe
Confidence 12246888886
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.20 E-value=7.1e-06 Score=71.58 Aligned_cols=107 Identities=13% Similarity=0.139 Sum_probs=68.3
Q ss_pred cCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
..++.+|||+||++|.|+..+.+...-..|+|+|+...+...... ... ...++.....+.....+..+.+|+|++
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~----~~~~iv~~~~~~di~~l~~~~~DlVls 153 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT----LGWNIVKFKDKSNVFTMPTEPSDTLLC 153 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB----TTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc----cCCceEEeecCceeeecCCCCcCEEee
Confidence 446889999999999999999986434478899997532100000 000 011333333333323344678999999
Q ss_pred cchhccCCCH-------HHHHHHHHhhcccC-cEEEEEecc
Q 021344 244 GAALHCWPSP-------SNAVAEISRILRSG-GVFVGTTFL 276 (314)
Q Consensus 244 ~~vl~h~~d~-------~~~l~~i~r~LkpG-G~l~i~~~~ 276 (314)
...-. ...+ ..+|+-+.++|+|| |.|++-.+.
T Consensus 154 D~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 154 DIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 76544 4333 24577778999999 999998866
No 299
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.16 E-value=2.5e-06 Score=66.61 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=60.3
Q ss_pred CCCeEEEEcCccc-HHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC--Cchhhh
Q 021344 166 QGGLLVDVSCGSG-LFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS--GFVDAV 241 (314)
Q Consensus 166 ~~~~iLDiGcG~G-~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~--~~fD~V 241 (314)
++.+|||||||.| ..+..|++ .+. .|+++|+++.++ .+++.|+.+ |..+ +.||+|
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av------------------~~v~dDiF~-P~~~~Y~~~DLI 93 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHG------------------GIVRDDITS-PRMEIYRGAALI 93 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSST------------------TEECCCSSS-CCHHHHTTEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCcccc------------------ceEEccCCC-CcccccCCcCEE
Confidence 3579999999999 69999997 665 899999988432 278889877 3222 379999
Q ss_pred eecchhccCCCHHHHHHHHHhhcccCcEEEEEecccC
Q 021344 242 HAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLRY 278 (314)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~~ 278 (314)
.+..- -++.+..+-++++. -|.-+++......
T Consensus 94 YsirP---P~El~~~i~~lA~~--v~adliI~pL~~E 125 (153)
T 2k4m_A 94 YSIRP---PAEIHSSLMRVADA--VGARLIIKPLTGE 125 (153)
T ss_dssp EEESC---CTTTHHHHHHHHHH--HTCEEEEECBTTB
T ss_pred EEcCC---CHHHHHHHHHHHHH--cCCCEEEEcCCCC
Confidence 87543 12334445555543 3677777766543
No 300
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=98.09 E-value=1.1e-06 Score=63.45 Aligned_cols=54 Identities=15% Similarity=0.104 Sum_probs=41.6
Q ss_pred CCCeeeccCCCccchhcCC------------------CCccccccccCceecCCCCccccCccceeeeeccc
Q 021344 57 EGDLFSCPICYEPLIRKGP------------------TGLTLGAIYRSGFKCRKCDKTYSSKDNYLDLTVIS 110 (314)
Q Consensus 57 ~~~~l~CP~C~~~l~~~~~------------------~~~~~~~i~~~~l~C~~C~~~~~~~~g~~~~~~~~ 110 (314)
.+++|+||.|+++|..... .+...+.+..+.+.|+.|+..|++++|+++++...
T Consensus 5 LLdILaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~dGIPvmL~~e 76 (97)
T 2k5r_A 5 LLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPEE 76 (97)
T ss_dssp TCSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGGG
T ss_pred HhhheECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccCCCcccChHH
Confidence 4678999999998765332 11233455578899999999999999999999763
No 301
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.03 E-value=2.2e-05 Score=68.21 Aligned_cols=112 Identities=14% Similarity=0.137 Sum_probs=75.2
Q ss_pred HHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEe-cCCCCCCCCC
Q 021344 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASG 236 (314)
Q Consensus 158 l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~-d~~~lp~~~~ 236 (314)
+.+.....++.+|||+||++|.|+..++.......|+|+|+...-.+.= ...+..+ ...+.+..+ |+..++. .
T Consensus 86 i~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~---w~lV~~~~~~Dv~~l~~--~ 159 (321)
T 3lkz_A 86 LVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYG---WNIVTMKSGVDVFYRPS--E 159 (321)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTT---GGGEEEECSCCTTSSCC--C
T ss_pred HHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcC---CcceEEEeccCHhhCCC--C
Confidence 3333555678899999999999999777765445799999975411000 0000000 134778877 8777663 5
Q ss_pred chhhheecchhccCCCHH-------HHHHHHHhhcccC-cEEEEEecc
Q 021344 237 FVDAVHAGAALHCWPSPS-------NAVAEISRILRSG-GVFVGTTFL 276 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~-------~~l~~i~r~LkpG-G~l~i~~~~ 276 (314)
.+|+|+|.-. +--+++. ++|+-+.+.|++| |-+++-.+.
T Consensus 160 ~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 160 CCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 6999999776 6666664 3566667889998 888887744
No 302
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.98 E-value=2.4e-05 Score=69.32 Aligned_cols=60 Identities=15% Similarity=0.197 Sum_probs=51.8
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 213 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~ 213 (314)
+.+.++.+.+... .++..|||++||+|..+..+++.+. +++|+|+++.+++.|+++++..
T Consensus 221 p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 221 PLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHh
Confidence 4566777776665 5788999999999999999999876 9999999999999999998775
No 303
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.90 E-value=4.7e-05 Score=64.11 Aligned_cols=112 Identities=18% Similarity=0.141 Sum_probs=73.2
Q ss_pred HHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEe-cCCCCCCCCC
Q 021344 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DVCRLPFASG 236 (314)
Q Consensus 158 l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~-d~~~lp~~~~ 236 (314)
+.+.....++.+|||+||++|.|+..++.......|+|+|+-..-.+. -...+.. ....++|..+ |+..++ ..
T Consensus 70 i~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~---gwn~v~fk~gvDv~~~~--~~ 143 (267)
T 3p8z_A 70 FVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTY---GWNIVKLMSGKDVFYLP--PE 143 (267)
T ss_dssp HHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCT---TTTSEEEECSCCGGGCC--CC
T ss_pred HHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhc---CcCceEEEeccceeecC--Cc
Confidence 333335667889999999999999988777544589999996532100 0000011 1257899998 876555 35
Q ss_pred chhhheecchhccCCCHH-------HHHHHHHhhcccCcEEEEEeccc
Q 021344 237 FVDAVHAGAALHCWPSPS-------NAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~-------~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.+|.|+|.-.= --+++. ++|+-+.+.|++ |-+++-.+..
T Consensus 144 ~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 144 KCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp CCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred cccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 69999986442 333432 356666788998 7888866443
No 304
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.86 E-value=1.3e-05 Score=68.55 Aligned_cols=103 Identities=19% Similarity=0.208 Sum_probs=63.6
Q ss_pred ccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCC-CCCe---EEEEe-cCCCCCCCCCc
Q 021344 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTIL-TSNL---ALVRA-DVCRLPFASGF 237 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~-~~~v---~~~~~-d~~~lp~~~~~ 237 (314)
-.+++.+|||+||+.|.|++.+++.-.-..|.|.++..+. . ...... ..++ .+.++ |+.+++ ...
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-------~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~ 139 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-------EEPMLMQSYGWNIVTMKSGVDVFYKP--SEI 139 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-------CCCCCCCSTTGGGEEEECSCCGGGSC--CCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-------cCCCcccCCCceEEEeeccCCccCCC--CCC
Confidence 4567999999999999999999886211133444443220 0 000000 0233 44446 887643 457
Q ss_pred hhhheecchhccCCCHH-------HHHHHHHhhcccCc-EEEEEecc
Q 021344 238 VDAVHAGAALHCWPSPS-------NAVAEISRILRSGG-VFVGTTFL 276 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~~-------~~l~~i~r~LkpGG-~l~i~~~~ 276 (314)
+|+|+|...=. ..++. .+|+-+.++|+||| .|++-.+.
T Consensus 140 ~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 140 SDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 99999865432 22221 25666778999999 89887765
No 305
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.47 E-value=7.2e-05 Score=66.66 Aligned_cols=83 Identities=19% Similarity=0.284 Sum_probs=64.2
Q ss_pred HHHHHHHhccCCCCeEEEEcCcccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-
Q 021344 155 FKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP- 232 (314)
Q Consensus 155 ~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp- 232 (314)
.+.+.+.+...+++.++|..+|.|..+..+++. ++..+|+|+|.++.+++.++ ++ . ..++.++++++.++.
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~----~~Rv~lv~~nF~~l~~ 118 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D----DPRFSIIHGPFSALGE 118 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C----CTTEEEEESCGGGHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c----CCcEEEEeCCHHHHHH
Confidence 345666777788999999999999999999887 56779999999999999884 33 1 268999999987653
Q ss_pred -CC----CCchhhheec
Q 021344 233 -FA----SGFVDAVHAG 244 (314)
Q Consensus 233 -~~----~~~fD~V~~~ 244 (314)
+. .+++|.|++.
T Consensus 119 ~L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 119 YVAERDLIGKIDGILLD 135 (347)
T ss_dssp HHHHTTCTTCEEEEEEE
T ss_pred HHHhcCCCCcccEEEEC
Confidence 11 1257777763
No 306
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.45 E-value=0.00039 Score=60.24 Aligned_cols=61 Identities=18% Similarity=0.188 Sum_probs=51.0
Q ss_pred CchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc
Q 021344 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 213 (314)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~ 213 (314)
-+..+++.+.+... .++..|||..||+|..+..+.+.+. +++|+|+++..++.++++++..
T Consensus 197 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 197 KPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp CCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhc
Confidence 34566666666654 5688999999999999999999876 9999999999999999998754
No 307
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.43 E-value=0.00053 Score=61.99 Aligned_cols=75 Identities=12% Similarity=0.088 Sum_probs=59.1
Q ss_pred chHHHHHHHHHhccCC------CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEE
Q 021344 151 PDEEFKMAQEYFKSAQ------GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~------~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~ 224 (314)
.....+.+.+.+...+ +..|||||.|.|.++..|++.....+|+++|+++..+...++.. . ..+++++
T Consensus 37 d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii 110 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQIL 110 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEE
T ss_pred CHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEE
Confidence 3455667777766543 58899999999999999998732348999999999999888865 2 2689999
Q ss_pred EecCCCC
Q 021344 225 RADVCRL 231 (314)
Q Consensus 225 ~~d~~~l 231 (314)
.+|+.++
T Consensus 111 ~~D~l~~ 117 (353)
T 1i4w_A 111 KRDPYDW 117 (353)
T ss_dssp CSCTTCH
T ss_pred ECCccch
Confidence 9999654
No 308
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.31 E-value=2.5e-05 Score=87.11 Aligned_cols=104 Identities=20% Similarity=0.202 Sum_probs=54.1
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCC-----CCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-CCCCCchh
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGT-----YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PFASGFVD 239 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~-----~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l-p~~~~~fD 239 (314)
+..+||+||.|+|..+..+.+... ..+++..|+|+...+.++++++.. ++..-..|.... ++..++||
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~yd 1313 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKAD 1313 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----CC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCcee
Confidence 456899999999976555443321 237889999988887777766542 222221233221 34456799
Q ss_pred hheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+|++..++|-.++....|++++++|||||++++.+.
T Consensus 1314 lvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1314 LLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp EEEEECC--------------------CCEEEEEEC
T ss_pred EEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999999888999999999999999999988764
No 309
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.08 E-value=0.0067 Score=54.43 Aligned_cols=118 Identities=14% Similarity=0.176 Sum_probs=82.3
Q ss_pred HHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCC------------------CCCC
Q 021344 158 AQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNT------------------ILTS 219 (314)
Q Consensus 158 l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~------------------~~~~ 219 (314)
+.+++...+...|+.+|||.......+...+++..++-+|. +..++.-++.+...+. ....
T Consensus 89 v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~ 167 (334)
T 1rjd_A 89 ILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQG 167 (334)
T ss_dssp HHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECS
T ss_pred HHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCC
Confidence 33444334567899999999988888887655567888887 8888777777766410 0126
Q ss_pred CeEEEEecCCCCCC---------CCCchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEeccc
Q 021344 220 NLALVRADVCRLPF---------ASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 220 ~v~~~~~d~~~lp~---------~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+..++.+|+.+..+ ..+...++++-.++.+++.. ..+++.+.+.. |+|.+++.+...
T Consensus 168 ~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~ 235 (334)
T 1rjd_A 168 RYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIG 235 (334)
T ss_dssp SEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECC
T ss_pred ceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccC
Confidence 79999999987432 22346678888899998644 46788888776 788877666543
No 310
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.99 E-value=0.0012 Score=57.32 Aligned_cols=96 Identities=9% Similarity=0.006 Sum_probs=63.9
Q ss_pred cCCCCeEEEEcC------cccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC
Q 021344 164 SAQGGLLVDVSC------GSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG 236 (314)
Q Consensus 164 ~~~~~~iLDiGc------G~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~ 236 (314)
...+.+|||+|+ ..|.+ .+++.++. ..++++|+.+-.. ... .++++|...... .+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s--------------da~-~~IqGD~~~~~~-~~ 168 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS--------------DAD-STLIGDCATVHT-AN 168 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC--------------SSS-EEEESCGGGEEE-SS
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc--------------CCC-eEEEcccccccc-CC
Confidence 456899999996 66773 44445554 4999999976320 123 459999765433 47
Q ss_pred chhhheecchh---ccCC--C------HHHHHHHHHhhcccCcEEEEEeccc
Q 021344 237 FVDAVHAGAAL---HCWP--S------PSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 237 ~fD~V~~~~vl---~h~~--d------~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
+||+|++...= -+.. . -+.++.-+.++|+|||.|++-.+..
T Consensus 169 k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp CEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 89999984321 1111 1 2356666788999999999988654
No 311
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.73 E-value=0.0079 Score=55.12 Aligned_cols=105 Identities=13% Similarity=0.126 Sum_probs=71.1
Q ss_pred HhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CC-----C
Q 021344 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP-----F 233 (314)
Q Consensus 161 ~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp-----~ 233 (314)
.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. ..+.+...-.+ +. .
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----------GFEIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----------TCEEEETTSSSCHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----------CCcEEccCCcchHHHHHHHH
Confidence 45667889999999987 88888888875333799999999998888761 22333211111 00 1
Q ss_pred -CCCchhhheecchh---------ccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 -ASGFVDAVHAGAAL---------HCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 -~~~~fD~V~~~~vl---------~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
....+|+|+-.-.- .|.+++...++...+.|++||++++...
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred hCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 12368988854332 1334556678999999999999987653
No 312
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=96.63 E-value=0.0011 Score=41.85 Aligned_cols=33 Identities=27% Similarity=0.496 Sum_probs=24.1
Q ss_pred CCCeeeccCCCc-cchhcCCCCccccccccCceecCCCCcccc
Q 021344 57 EGDLFSCPICYE-PLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (314)
Q Consensus 57 ~~~~l~CP~C~~-~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (314)
....+.||.|++ ++.... ..+.+.|..||..|.
T Consensus 2 ~~~~~~CP~C~~~~l~~d~---------~~gelvC~~CG~v~~ 35 (50)
T 1pft_A 2 VNKQKVCPACESAELIYDP---------ERGEIVCAKCGYVIE 35 (50)
T ss_dssp CSSCCSCTTTSCCCEEEET---------TTTEEEESSSCCBCC
T ss_pred CCccEeCcCCCCcceEEcC---------CCCeEECcccCCccc
Confidence 345678999999 654432 236899999998874
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.56 E-value=0.011 Score=53.56 Aligned_cols=102 Identities=17% Similarity=0.117 Sum_probs=67.1
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-----CC
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-----PF 233 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l-----p~ 233 (314)
+.....++.+||.+|+|. |.++..+++.....+|+++|.++..++.+++. + . -..+..+-.++ ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a-~~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----G----A-THVINSKTQDPVAAIKEI 254 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----T----C-SEEEETTTSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----C----C-CEEecCCccCHHHHHHHh
Confidence 445567889999999987 88888888764223799999999998888763 1 1 11222111111 01
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
..+.+|+|+-.-. . ...++...+.|++||++++....
T Consensus 255 ~~gg~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 255 TDGGVNFALESTG-----S-PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp TTSCEEEEEECSC-----C-HHHHHHHHHTEEEEEEEEECCCC
T ss_pred cCCCCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEeCCC
Confidence 1236888775322 2 35688899999999999886543
No 314
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.55 E-value=0.0054 Score=56.31 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=68.8
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-C-----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-P----- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l-p----- 232 (314)
......++.+||.+|+|. |.++..+++.....+|+++|.++..++.+++ ...+.+..+-.+. .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----------lGa~~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----------AGFETIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----------TTCEEEETTSSSCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----------cCCcEEcCCCcchHHHHHHH
Confidence 455667899999999987 8888888876422389999999998888765 1223332211111 0
Q ss_pred C-CCCchhhheecchhc---------cCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 F-ASGFVDAVHAGAALH---------CWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 ~-~~~~fD~V~~~~vl~---------h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
. ....||+|+-.-.-. |. ++...+++..+.|++||++++...
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~-~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTE-TPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSB-CTTHHHHHHHHHEEEEEEEECCSC
T ss_pred HhCCCCCCEEEECCCCcccccccccccc-ccHHHHHHHHHHHhcCCEEEEecc
Confidence 0 122589887543321 11 123468899999999999987653
No 315
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.47 E-value=0.039 Score=48.89 Aligned_cols=107 Identities=17% Similarity=0.089 Sum_probs=77.2
Q ss_pred CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC----CC-----c
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA----SG-----F 237 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~----~~-----~ 237 (314)
...||++|||-=.....+.. .....++-+| .+..++..++.+...+.....+..++.+|+.+ .+. .. .
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 35799999998666555442 2236899999 59999999998875432234678999999976 321 11 2
Q ss_pred hhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEecc
Q 021344 238 VDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
--++++-.+++|+++. ..+++.+...+.||+.+++....
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 2356677889998754 47888888888899999887754
No 316
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.30 E-value=0.0012 Score=57.38 Aligned_cols=105 Identities=9% Similarity=-0.049 Sum_probs=78.4
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CC---CCCCchhhh
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP---FASGFVDAV 241 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp---~~~~~fD~V 241 (314)
++..+||+=+|+|.++..+.+.+ .+++.+|.++..++..+++++. ..+++++..|... +. -+..+||+|
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred cCCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 35678999999999999999855 4999999999999999887754 2679999999643 21 123579999
Q ss_pred eecchhccCCCHHHHHHHHHh--hcccCcEEEEEeccc
Q 021344 242 HAGAALHCWPSPSNAVAEISR--ILRSGGVFVGTTFLR 277 (314)
Q Consensus 242 ~~~~vl~h~~d~~~~l~~i~r--~LkpGG~l~i~~~~~ 277 (314)
++.=-.+.-.+...+++.+.+ .+.|+|++++.-+..
T Consensus 164 fiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 164 FIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp EECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred EECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 986544433345566666665 456899999988654
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.16 E-value=0.027 Score=51.04 Aligned_cols=100 Identities=21% Similarity=0.231 Sum_probs=68.5
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC------
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp------ 232 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++...+.+++. + .. ..+ |.....
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi--~~~~~~~~~~i~ 244 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----G----AT-ATV--DPSAGDVVEAIA 244 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----T----CS-EEE--CTTSSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----C----CC-EEE--CCCCcCHHHHHH
Confidence 445667899999999987 88888888875334899999999988888763 1 11 112 211110
Q ss_pred ----CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 ----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
...+.+|+|+-.- .. ...++...+.|++||++++....
T Consensus 245 ~~~~~~~gg~Dvvid~~-----G~-~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 245 GPVGLVPGGVDVVIECA-----GV-AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp STTSSSTTCEEEEEECS-----CC-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred hhhhccCCCCCEEEECC-----CC-HHHHHHHHHHhccCCEEEEEecc
Confidence 2234688887532 22 34688899999999999887644
No 318
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.88 E-value=0.018 Score=51.63 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=66.0
Q ss_pred HhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchh
Q 021344 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVD 239 (314)
Q Consensus 161 ~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD 239 (314)
.....++.+||-+|+|. |.++..+++.. ..+|+++|.++...+.+++. + ... .+ .+... +. +.+|
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~~-v~-~~~~~--~~-~~~D 236 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM----G----VKH-FY-TDPKQ--CK-EELD 236 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT----T----CSE-EE-SSGGG--CC-SCEE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc----C----CCe-ec-CCHHH--Hh-cCCC
Confidence 34667899999999987 88888888764 34999999999888888762 1 111 22 33222 22 2688
Q ss_pred hheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 240 AVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 240 ~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+|+-.-. .+ ..++...+.|++||++++....
T Consensus 237 ~vid~~g-----~~-~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 237 FIISTIP-----TH-YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp EEEECCC-----SC-CCHHHHHTTEEEEEEEEECCCC
T ss_pred EEEECCC-----cH-HHHHHHHHHHhcCCEEEEECCC
Confidence 8885332 11 2477888999999999987643
No 319
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.86 E-value=0.071 Score=48.00 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=69.2
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC---C----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---L---- 231 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~---l---- 231 (314)
+.....++.+||-+|+|. |.++..+++......|+++|.++..++.+++. .. .-+.+. .+... +
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~------~~~~~~-~~~~~~~~~~~~v 244 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP------EVVTHK-VERLSAEESAKKI 244 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT------TCEEEE-CCSCCHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch------hccccc-ccccchHHHHHHH
Confidence 445667889999999987 88888888875333499999999999999875 21 112222 11100 0
Q ss_pred --CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 232 --PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 232 --p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
-.....+|+|+-.-. . ...++...+.|++||++++.....
T Consensus 245 ~~~t~g~g~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~~~ 286 (363)
T 3m6i_A 245 VESFGGIEPAVALECTG-----V-ESSIAAAIWAVKFGGKVFVIGVGK 286 (363)
T ss_dssp HHHTSSCCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECCCCC
T ss_pred HHHhCCCCCCEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEccCC
Confidence 011346888875322 2 345788899999999999876543
No 320
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.85 E-value=0.028 Score=50.79 Aligned_cols=92 Identities=18% Similarity=0.188 Sum_probs=62.2
Q ss_pred CCCeEEEEc-Ccc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-C-----CCCCCc
Q 021344 166 QGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-L-----PFASGF 237 (314)
Q Consensus 166 ~~~~iLDiG-cG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-l-----p~~~~~ 237 (314)
++.+||-+| +|. |.++..+++.....+|+++|.++..++.+++. + .+.+. |..+ + ....+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----G------ad~vi-~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----G------AHHVI-DHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----T------CSEEE-CTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----C------CCEEE-eCCCCHHHHHHHhcCCC
Confidence 678999998 555 88999999862245999999999988888762 1 11111 2111 0 112346
Q ss_pred hhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+|+|+-.-. -...++.+.+.|++||++++..
T Consensus 240 ~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 240 PAFVFSTTH------TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EEEEEECSC------HHHHHHHHHHHSCTTCEEEECS
T ss_pred ceEEEECCC------chhhHHHHHHHhcCCCEEEEEC
Confidence 888775322 2356888999999999998763
No 321
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.83 E-value=0.023 Score=52.35 Aligned_cols=63 Identities=11% Similarity=0.119 Sum_probs=48.0
Q ss_pred cCCCCeEEEEcCcccHHHHHHH-HhCC-CCeEEEEeCCHHHHHHHHHHHHh--cCCCCC-CCeEEEEecC
Q 021344 164 SAQGGLLVDVSCGSGLFSRKFA-KSGT-YSGVVALDFSENMLRQCYDFIKQ--DNTILT-SNLALVRADV 228 (314)
Q Consensus 164 ~~~~~~iLDiGcG~G~~~~~l~-~~~~-~~~v~giD~s~~~~~~a~~~~~~--~~~~~~-~~v~~~~~d~ 228 (314)
..++..++|||++.|.++..++ +.++ ..+|+++|+++...+..+++++. ++ .. .++.++..-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~--~~~~~v~~~~~al 291 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDT--NFASRITVHGCGA 291 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTS--TTGGGEEEECSEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhcc--CCCCCEEEEEeEE
Confidence 3578899999999999999887 4443 36999999999999999998876 21 12 4565554433
No 322
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.77 E-value=0.032 Score=45.56 Aligned_cols=95 Identities=20% Similarity=0.138 Sum_probs=60.9
Q ss_pred HhccCCCCeEEEEcC--cccHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----
Q 021344 161 YFKSAQGGLLVDVSC--GSGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (314)
Q Consensus 161 ~l~~~~~~~iLDiGc--G~G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----- 232 (314)
.....++.+||.+|+ |.|..+..+++ .|. +|+++|.+++..+.+++ .+ .. .. .|..+..
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~----~g----~~-~~--~d~~~~~~~~~~ 99 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLSR----LG----VE-YV--GDSRSVDFADEI 99 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHT----TC----CS-EE--EETTCSTHHHHH
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH----cC----CC-EE--eeCCcHHHHHHH
Confidence 345567889999994 44766655554 454 89999999887766643 12 11 11 2333211
Q ss_pred ---CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 ---FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
...+.+|+|+.... ...++...+.|++||+++....
T Consensus 100 ~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 100 LELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred HHHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 11235888875432 2468889999999999988654
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.76 E-value=0.028 Score=50.61 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=66.3
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC---CC----C
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV---CR----L 231 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~---~~----l 231 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + .. ..+..+- .+ +
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~~i 235 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----G----AD-LVLQISKESPQEIARKV 235 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----T----CS-EEEECSSCCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----C----CC-EEEcCcccccchHHHHH
Confidence 345667889999999986 88888888865333899999999988888752 1 11 2222110 00 0
Q ss_pred -CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 232 -PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 232 -p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
....+.+|+|+-.- .. ...+....+.|++||++++...
T Consensus 236 ~~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 236 EGQLGCKPEVTIECT-----GA-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHHTSCCSEEEECS-----CC-HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHHhCCCCCEEEECC-----CC-hHHHHHHHHHhcCCCEEEEEec
Confidence 00113578877432 22 3457888999999999988664
No 324
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.75 E-value=0.018 Score=51.34 Aligned_cols=60 Identities=10% Similarity=0.104 Sum_probs=49.9
Q ss_pred chHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhc
Q 021344 151 PDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQD 213 (314)
Q Consensus 151 ~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~ 213 (314)
+.++++.+.+... .++..|||.-||+|..+....+.+. +.+|+|+++...+.+++++...
T Consensus 238 p~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 238 PAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCS
T ss_pred CHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhc
Confidence 4566666666553 4688999999999999999998876 9999999999999999877654
No 325
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.64 E-value=0.027 Score=48.44 Aligned_cols=108 Identities=17% Similarity=0.171 Sum_probs=70.4
Q ss_pred CCeEEEEcCcccHHHHHHHHh-------CCCCeEEEEe-----CCHH-------------------HHHHHHHHHH---h
Q 021344 167 GGLLVDVSCGSGLFSRKFAKS-------GTYSGVVALD-----FSEN-------------------MLRQCYDFIK---Q 212 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~-------~~~~~v~giD-----~s~~-------------------~~~~a~~~~~---~ 212 (314)
.+.|+|+|+-.|..+..++.. ++..+++++| +.+. ..+..++.++ .
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 568999999999977775542 4567999999 3210 0111222111 1
Q ss_pred -cCCCC-CCCeEEEEecCCC-CC-----CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 213 -DNTIL-TSNLALVRADVCR-LP-----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 213 -~~~~~-~~~v~~~~~d~~~-lp-----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
...+. ..+++++.+++.+ +| .+.++||+|+...-. .......+..+...|+|||++++-++.
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 11112 3789999999865 33 234579999986532 123346789999999999999998864
No 326
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.62 E-value=0.034 Score=50.05 Aligned_cols=98 Identities=13% Similarity=0.103 Sum_probs=63.8
Q ss_pred HhccCCC------CeEEEEcCcc-cHHH-HHHH-HhCCCCeEEEEeCCHH---HHHHHHHHHHhcCCCCCCCeEEEEecC
Q 021344 161 YFKSAQG------GLLVDVSCGS-GLFS-RKFA-KSGTYSGVVALDFSEN---MLRQCYDFIKQDNTILTSNLALVRADV 228 (314)
Q Consensus 161 ~l~~~~~------~~iLDiGcG~-G~~~-~~l~-~~~~~~~v~giD~s~~---~~~~a~~~~~~~~~~~~~~v~~~~~d~ 228 (314)
.....++ .+||-+|+|. |.++ ..++ +.....+|+++|.+++ ..+.+++ ...+.+ |.
T Consensus 161 ~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----------lGa~~v--~~ 228 (357)
T 2b5w_A 161 HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----------LDATYV--DS 228 (357)
T ss_dssp HHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----------TTCEEE--ET
T ss_pred hcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----------cCCccc--CC
Confidence 3445567 8999999865 7788 8888 6532224999999887 7777765 223333 43
Q ss_pred CCCCCC-----CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 229 CRLPFA-----SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 229 ~~lp~~-----~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.+..+. .+.+|+|+-. ... ...++...+.|++||++++....
T Consensus 229 ~~~~~~~i~~~~gg~Dvvid~-----~g~-~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 229 RQTPVEDVPDVYEQMDFIYEA-----TGF-PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp TTSCGGGHHHHSCCEEEEEEC-----SCC-HHHHHHHHHHEEEEEEEEECCCC
T ss_pred CccCHHHHHHhCCCCCEEEEC-----CCC-hHHHHHHHHHHhcCCEEEEEeCC
Confidence 321111 1257777643 222 24578899999999999887643
No 327
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.62 E-value=0.026 Score=50.68 Aligned_cols=102 Identities=14% Similarity=0.159 Sum_probs=67.9
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----C
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F 233 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~ 233 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.- . -.++..+-.++. .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG--------a-~~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYG--------A-TDIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHT--------C-CEEECGGGSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhC--------C-ceEEcCCCcCHHHHHHHH
Confidence 455667899999999987 888888888753337999999999888887731 1 112221111110 1
Q ss_pred -CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 234 -ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 234 -~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
....+|+|+-... . ...++...+.|++||++++....
T Consensus 231 t~g~g~D~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 231 TDGKGVDKVVIAGG-----D-VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp TTTCCEEEEEECSS-----C-TTHHHHHHHHEEEEEEEEECCCC
T ss_pred cCCCCCCEEEECCC-----C-hHHHHHHHHHHhcCCEEEEeccc
Confidence 1235888875322 2 24578889999999999876543
No 328
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=95.60 E-value=0.0036 Score=47.26 Aligned_cols=29 Identities=14% Similarity=0.362 Sum_probs=25.5
Q ss_pred cccccCceecCCCCccccCccceeeeecc
Q 021344 81 GAIYRSGFKCRKCDKTYSSKDNYLDLTVI 109 (314)
Q Consensus 81 ~~i~~~~l~C~~C~~~~~~~~g~~~~~~~ 109 (314)
..+.+|.+.|+.||+.|++++|+++.+..
T Consensus 93 ~~V~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 93 IDVVEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp EEEEEEEEEETTTCCEEEEETTEEECSSC
T ss_pred eEEEEEEEECCCCCCEeeccCCcccHHHh
Confidence 46677899999999999999999998754
No 329
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.58 E-value=0.037 Score=49.42 Aligned_cols=98 Identities=18% Similarity=0.214 Sum_probs=66.1
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----- 233 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~----- 233 (314)
......++.+||-+|+|. |.++..+++.. ..+|+++|.++..++.+++. + .. ..+ |..+..+
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~i--~~~~~~~~~~~~ 227 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL----G----AE-VAV--NARDTDPAAWLQ 227 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----T----CS-EEE--ETTTSCHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc----C----CC-EEE--eCCCcCHHHHHH
Confidence 344567889999999986 88888888874 34999999999998888762 1 11 122 2222111
Q ss_pred -CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 -ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 -~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..+.+|+|+.... . ...++...+.|++||++++...
T Consensus 228 ~~~g~~d~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 228 KEIGGAHGVLVTAV-----S-PKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp HHHSSEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECSC
T ss_pred HhCCCCCEEEEeCC-----C-HHHHHHHHHHhccCCEEEEeCC
Confidence 1125777764321 2 3568889999999999988654
No 330
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.51 E-value=0.097 Score=46.89 Aligned_cols=100 Identities=16% Similarity=0.109 Sum_probs=65.4
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC-CCCC-----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV-CRLP----- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~-~~lp----- 232 (314)
+.....++.+||-+|+|. |.++..+++.. ..+|+++|.++..++.+++. + .. ..+..+- .+..
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~~~~~~~~~~~~~i~~ 231 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC----G----AD-VTLVVDPAKEEESSIIE 231 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----T----CS-EEEECCTTTSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh----C----CC-EEEcCcccccHHHHHHH
Confidence 344567889999999886 78888887764 33799999999988888752 1 11 2222110 1110
Q ss_pred -CC---CCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 -FA---SGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 -~~---~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.. .+.+|+|+..- .. ...++...+.|++||++++...
T Consensus 232 ~~~~~~g~g~D~vid~~-----g~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 232 RIRSAIGDLPNVTIDCS-----GN-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHHSSSCCSEEEECS-----CC-HHHHHHHHHHSCTTCEEEECSC
T ss_pred HhccccCCCCCEEEECC-----CC-HHHHHHHHHHHhcCCEEEEEec
Confidence 01 23588877532 22 3457888999999999988654
No 331
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.48 E-value=0.028 Score=50.05 Aligned_cols=61 Identities=18% Similarity=0.330 Sum_probs=49.1
Q ss_pred CchHHHHHHHHHhccCCCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHHHhc
Q 021344 150 GPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSE---NMLRQCYDFIKQD 213 (314)
Q Consensus 150 ~~~~~~~~l~~~l~~~~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~---~~~~~a~~~~~~~ 213 (314)
-+..+++.+.+... .++..|||.-||+|..+.+..+.+. +.+|+|+++ ..++.+++++...
T Consensus 227 kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 227 KPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHHc
Confidence 34566667766554 4688999999999999999999876 999999999 9999999987543
No 332
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.48 E-value=0.033 Score=50.55 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=66.8
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEec--CCCC-----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD--VCRL----- 231 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d--~~~l----- 231 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + . -..+... -.++
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----G----a-~~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----G----V-NEFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----T----C-CEEECGGGCSSCHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C----C-cEEEccccCchhHHHHHH
Confidence 445667889999999986 88888888764233899999999888887652 1 1 1122111 0111
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccC-cEEEEEecc
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTFL 276 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpG-G~l~i~~~~ 276 (314)
...++.+|+|+-.- .. ...++...+.|++| |++++....
T Consensus 258 ~~~~gg~D~vid~~-----g~-~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 258 DLTDGGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp HHTTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HhcCCCCCEEEECC-----CC-HHHHHHHHHHhhccCCEEEEEccc
Confidence 01233688887532 22 34588899999997 999887653
No 333
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.47 E-value=0.01 Score=52.53 Aligned_cols=93 Identities=10% Similarity=0.034 Sum_probs=61.5
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCch
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFV 238 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~f 238 (314)
+.....++.+||-+|+|. |.++..+++.. +.+|++++ ++...+.+++. ..+.+.-|...+ .+.+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~l----------Ga~~v~~d~~~v---~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKR----------GVRHLYREPSQV---TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHH----------TEEEEESSGGGC---CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHc----------CCCEEEcCHHHh---CCCc
Confidence 445667899999999975 88888888763 23999999 88888888762 122222232222 4578
Q ss_pred hhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
|+|+-.-. . ..+....+.|++||+++...
T Consensus 201 Dvv~d~~g-----~--~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 201 FAIFDAVN-----S--QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEEECC--------------TTGGGEEEEEEEEEEC
T ss_pred cEEEECCC-----c--hhHHHHHHHhcCCCEEEEEe
Confidence 98885432 1 12356789999999998874
No 334
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.41 E-value=0.038 Score=49.46 Aligned_cols=98 Identities=13% Similarity=0.181 Sum_probs=65.4
Q ss_pred ccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----C-CC
Q 021344 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-AS 235 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~-~~ 235 (314)
...++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + .. ..+..+ .+.. . ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----G----a~-~~i~~~-~~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----G----AD-AAVKSG-AGAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----T----CS-EEEECS-TTHHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----C----CC-EEEcCC-CcHHHHHHHHhCC
Confidence 556789999999987 88888888763245999999999999888762 1 11 122211 1110 0 11
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
..+|+|+-. +.. ...++...+.|++||++++....
T Consensus 238 ~g~d~v~d~-----~G~-~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 238 QGATAVFDF-----VGA-QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp GCEEEEEES-----SCC-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCCeEEEEC-----CCC-HHHHHHHHHHHhcCCEEEEECCC
Confidence 257777643 222 34688999999999999887643
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.36 E-value=0.033 Score=50.29 Aligned_cols=100 Identities=15% Similarity=0.087 Sum_probs=66.8
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC------
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp------ 232 (314)
+.....++.+||-+|+|. |..+..+++.. +.+|+++|.++..++.+++. + . -..+..+..++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a-~~vi~~~~~~~~~~v~~~ 252 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL----G----A-DHGINRLEEDWVERVYAL 252 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----T----C-SEEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc----C----C-CEEEcCCcccHHHHHHHH
Confidence 345567889999999887 88888887764 34999999999988888763 1 1 122221111110
Q ss_pred CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.....+|+|+-... ...+....+.|++||++++....
T Consensus 253 ~~g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 253 TGDRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp HTTCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred hCCCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEecC
Confidence 11236898876433 12477788999999999987644
No 336
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.23 E-value=0.062 Score=47.74 Aligned_cols=97 Identities=10% Similarity=-0.010 Sum_probs=62.7
Q ss_pred HHhccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CC----
Q 021344 160 EYFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LP---- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp---- 232 (314)
+.....++.+||..|+ |.|..+..+++.. +.+|+++|.++..++.+++. + ... ..|..+ ..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~----g----~~~---~~d~~~~~~~~~~ 206 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI----G----FDA---AFNYKTVNSLEEA 206 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CSE---EEETTSCSCHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C----CcE---EEecCCHHHHHHH
Confidence 3445667899999998 4577766666543 23999999999888777441 1 111 124332 11
Q ss_pred ---CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 ---FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
...+.+|+|+.... ...++...+.|++||++++...
T Consensus 207 ~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 207 LKKASPDGYDCYFDNVG-------GEFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp HHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhCCCCeEEEECCC-------hHHHHHHHHHHhcCCEEEEEec
Confidence 11246888776543 1347888999999999987653
No 337
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.19 E-value=0.044 Score=49.58 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=65.5
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC--CCC-----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRL----- 231 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~--~~l----- 231 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + .. ..+..+- .++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----G----AT-ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----T----CS-EEECGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----C----Cc-EEEecccccchHHHHHH
Confidence 345567789999999986 88888888764223799999999888888752 1 11 1221110 111
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccC-cEEEEEec
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpG-G~l~i~~~ 275 (314)
....+.+|+|+-.- .. ...++...+.|++| |++++...
T Consensus 256 ~~t~gg~Dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 256 EKTNGGVDYAVECA-----GR-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp HHTTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHhCCCCCEEEECC-----CC-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 01123688877532 22 34578899999999 99987654
No 338
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.07 E-value=0.075 Score=47.40 Aligned_cols=95 Identities=24% Similarity=0.249 Sum_probs=62.9
Q ss_pred ccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCC------
Q 021344 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFAS------ 235 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~------ 235 (314)
...++.+||-+|+|. |..+..+++.. +.+|+++|.++..++.+++. + ...+ .|..+..+.+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----G------a~~~-~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL----G------ADLV-VNPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----T------CSEE-ECTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHC----C------CCEE-ecCCCccHHHHHHHHh
Confidence 566789999999975 77777777764 34999999999988887651 1 1111 2332211100
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+.+|+|+... .. ...++...+.|++||++++...
T Consensus 229 ~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 GGVHAAVVTA-----VS-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSEEEEEESS-----CC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECC-----CC-HHHHHHHHHHhhcCCEEEEecc
Confidence 3577776432 22 2457888999999999987653
No 339
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.06 E-value=0.054 Score=49.05 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=65.3
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC--CCCC----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRLP---- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~--~~lp---- 232 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + .. ..+..+- .++.
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~-~vi~~~~~~~~~~~~v~ 259 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----G----AT-DCLNPRELDKPVQDVIT 259 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T----CS-EEECGGGCSSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----C----Cc-EEEccccccchHHHHHH
Confidence 344566789999999886 88888888875333899999999888887652 1 11 1221110 0110
Q ss_pred -CCCCchhhheecchhccCCCHHHHHHHHHhhcccC-cEEEEEec
Q 021344 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (314)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpG-G~l~i~~~ 275 (314)
...+.+|+|+-. ... ...++...+.|++| |++++...
T Consensus 260 ~~~~~g~Dvvid~-----~G~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 260 ELTAGGVDYSLDC-----AGT-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHTSCBSEEEES-----SCC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHhCCCccEEEEC-----CCC-HHHHHHHHHHhhcCCCEEEEECC
Confidence 112357877643 222 34588899999999 99987654
No 340
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.04 E-value=0.16 Score=45.13 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=65.5
Q ss_pred HHHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----
Q 021344 159 QEYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (314)
Q Consensus 159 ~~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----- 232 (314)
.......++.+||-+|+|. |.++..+++......++++|.++..++.+++. .....+..+-...+
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l---------Ga~~~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF---------GAMQTFNSSEMSAPQMQSV 223 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---------TCSEEEETTTSCHHHHHHH
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc---------CCeEEEeCCCCCHHHHHHh
Confidence 3445567889999999987 66777777765445789999999988888772 11222222111111
Q ss_pred -CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.....+|+|+.. ... ...++...+.|++||.+++....
T Consensus 224 ~~~~~g~d~v~d~-----~G~-~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 224 LRELRFNQLILET-----AGV-PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp HGGGCSSEEEEEC-----SCS-HHHHHHHHHHCCTTCEEEECCCC
T ss_pred hcccCCccccccc-----ccc-cchhhhhhheecCCeEEEEEecc
Confidence 012345655532 222 34578888999999999886644
No 341
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.00 E-value=0.09 Score=46.72 Aligned_cols=100 Identities=10% Similarity=0.008 Sum_probs=65.4
Q ss_pred HHHHhccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC---
Q 021344 158 AQEYFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--- 232 (314)
Q Consensus 158 l~~~l~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp--- 232 (314)
+.+.....++.+||-+|+ |.|..+..+++.. ..+|+++|.++..++.+.+.+ + .. ..+ |..+..
T Consensus 141 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~---g----~~-~~~--~~~~~~~~~ 209 (336)
T 4b7c_A 141 LLDVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEEL---G----FD-GAI--DYKNEDLAA 209 (336)
T ss_dssp HHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT---C----CS-EEE--ETTTSCHHH
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C----CC-EEE--ECCCHHHHH
Confidence 335556778999999998 4478777777653 339999999998887773321 1 11 112 222211
Q ss_pred ----CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 ----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
...+.+|+|+.... ...+....+.|++||++++...
T Consensus 210 ~~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 210 GLKRECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HHHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 11245888775432 2468889999999999988654
No 342
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.98 E-value=0.058 Score=49.10 Aligned_cols=70 Identities=19% Similarity=0.177 Sum_probs=54.6
Q ss_pred CeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC--------CCCchh
Q 021344 168 GLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------ASGFVD 239 (314)
Q Consensus 168 ~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------~~~~fD 239 (314)
.+++|+-||.|.+...+...|. ..+.++|+++.+++..+.+. .+..++.+|+.++.. ....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N~--------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAINF--------PRSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHC--------TTSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHhC--------CCCceEecChhhcCHHHHHhhcccCCCee
Confidence 4799999999999999999884 35679999999988887753 456778889877531 235799
Q ss_pred hheecch
Q 021344 240 AVHAGAA 246 (314)
Q Consensus 240 ~V~~~~v 246 (314)
+|+...-
T Consensus 74 ~i~ggpP 80 (376)
T 3g7u_A 74 GIIGGPP 80 (376)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9987543
No 343
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.96 E-value=0.07 Score=48.27 Aligned_cols=101 Identities=17% Similarity=0.173 Sum_probs=65.2
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC--CCCC----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRLP---- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~--~~lp---- 232 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + .. ..+..+- .++.
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----G----AT-DFVNPNDHSEPISQVLS 256 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T----CC-EEECGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----C----Cc-eEEeccccchhHHHHHH
Confidence 344566789999999876 88888888775323799999999888888752 1 11 1221110 0110
Q ss_pred -CCCCchhhheecchhccCCCHHHHHHHHHhhcccC-cEEEEEec
Q 021344 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (314)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpG-G~l~i~~~ 275 (314)
...+.+|+|+-.- .. ...++...+.|++| |++++...
T Consensus 257 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 257 KMTNGGVDFSLECV-----GN-VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHHTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHhCCCCCEEEECC-----CC-HHHHHHHHHHhhcCCcEEEEEcC
Confidence 1123578777432 22 34588899999999 99987654
No 344
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.94 E-value=0.13 Score=46.99 Aligned_cols=98 Identities=13% Similarity=0.039 Sum_probs=64.5
Q ss_pred ccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-------C-
Q 021344 163 KSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------F- 233 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-------~- 233 (314)
...++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.- . -.++ |..... .
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG--------a-~~vi--~~~~~~~~~~i~~~t 278 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELG--------A-DHVI--DPTKENFVEAVLDYT 278 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHT--------C-SEEE--CTTTSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC--------C-CEEE--cCCCCCHHHHHHHHh
Confidence 456789999999976 888888888753348999999999998887631 1 1122 221111 1
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhc----ccCcEEEEEecc
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRIL----RSGGVFVGTTFL 276 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~L----kpGG~l~i~~~~ 276 (314)
....+|+|+-. +..+...+..+.+.| ++||++++....
T Consensus 279 ~g~g~D~vid~-----~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 279 NGLGAKLFLEA-----TGVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp TTCCCSEEEEC-----SSCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCCCCCEEEEC-----CCCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 12358877743 344544556666666 999999987643
No 345
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.86 E-value=0.078 Score=47.96 Aligned_cols=101 Identities=15% Similarity=0.136 Sum_probs=65.1
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC--CCC-----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRL----- 231 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~--~~l----- 231 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + .. ..+..+- .++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~~ 255 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----G----AT-ECVNPQDYKKPIQEVLT 255 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----T----CS-EEECGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----C----Cc-eEecccccchhHHHHHH
Confidence 344566789999999886 88888888765333799999999888887652 1 11 1221110 111
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccC-cEEEEEec
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpG-G~l~i~~~ 275 (314)
....+.+|+|+-.- .. ...++...+.|++| |++++...
T Consensus 256 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 256 EMSNGGVDFSFEVI-----GR-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp HHTTSCBSEEEECS-----CC-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred HHhCCCCcEEEECC-----CC-HHHHHHHHHHhhcCCcEEEEecc
Confidence 01123578776432 22 34578889999999 99987653
No 346
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.85 E-value=0.13 Score=45.94 Aligned_cols=100 Identities=16% Similarity=0.123 Sum_probs=61.4
Q ss_pred HhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC------C
Q 021344 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------F 233 (314)
Q Consensus 161 ~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp------~ 233 (314)
.....++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++.- .. ..+...-.+.. .
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~G--------a~-~~i~~~~~~~~~~v~~~t 228 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIG--------AD-VTINSGDVNPVDEIKKIT 228 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTT--------CS-EEEEC-CCCHHHHHHHHT
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcC--------Ce-EEEeCCCCCHHHHhhhhc
Confidence 34567789999999987 455555555433569999999999888777621 11 12221111110 1
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
....+|+++...+ -...+....+.|++||.+++...
T Consensus 229 ~g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 229 GGLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp TSSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCceEEEEecc------CcchhheeheeecCCceEEEEec
Confidence 1223555543221 24568888999999999988654
No 347
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.84 E-value=0.27 Score=38.50 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=61.8
Q ss_pred CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCC-------------------HHHHHHHHHHHHhcCCCCCCCeEEEEec
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFS-------------------ENMLRQCYDFIKQDNTILTSNLALVRAD 227 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s-------------------~~~~~~a~~~~~~~~~~~~~~v~~~~~d 227 (314)
.+-|||+|-|+|+.-.++.+..++.+++++|-. .+++..+..++ + ..+.+.++|
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~---g----~~a~LaHaD 113 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERF---G----ATASLVHAD 113 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHH---C----SCEEEEEEC
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhc---C----CceEEEEee
Confidence 557999999999999999999999999999842 12333333332 2 567777777
Q ss_pred CCCCCCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 228 VCRLPFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 228 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
+-.- +..-|+++..+. -.-+..+|.|||+++-..+.
T Consensus 114 ~G~g---~~~~d~a~a~~l----------splI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 114 LGGH---NREKNDRFARLI----------SPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp CCCS---CHHHHHHHHHHH----------HHHHGGGEEEEEEEEESSCC
T ss_pred cCCC---CcchhHHHHHhh----------hHHHHHHhcCCcEEEeCCcc
Confidence 6432 233455554332 34466899999999876655
No 348
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.80 E-value=0.086 Score=46.85 Aligned_cols=97 Identities=18% Similarity=0.232 Sum_probs=63.4
Q ss_pred hccCCCCeEEEEcC-c-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC------C
Q 021344 162 FKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------F 233 (314)
Q Consensus 162 l~~~~~~~iLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp------~ 233 (314)
....++.+||-+|+ | .|..+..+++.. +.+|+++|.++..++.+++. + .. ..+..+-.+.. .
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY----G----AE-YLINASKEDILRQVLKFT 213 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHHHT
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----Cc-EEEeCCCchHHHHHHHHh
Confidence 35667899999994 3 477777777763 34999999999988877662 1 11 12221111110 1
Q ss_pred CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
....+|+|+....- ..++...+.|++||++++...
T Consensus 214 ~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 214 NGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp TTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 13468988864431 357888899999999988654
No 349
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.75 E-value=0.1 Score=46.23 Aligned_cols=98 Identities=11% Similarity=0.086 Sum_probs=64.6
Q ss_pred HhccCCCCeEEEEc-Cc-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC------
Q 021344 161 YFKSAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (314)
Q Consensus 161 ~l~~~~~~~iLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp------ 232 (314)
.....++.+||-+| +| .|..+..+++.. +.+|+++|.++..++.+++. + .. ..+ |..+..
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----G----a~-~~~--~~~~~~~~~~~~ 202 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL----G----AW-ETI--DYSHEDVAKRVL 202 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHHH
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----CC-EEE--eCCCccHHHHHH
Confidence 34566789999999 34 488777777653 23999999999988888762 1 11 122 222211
Q ss_pred --CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEeccc
Q 021344 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFLR 277 (314)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~~ 277 (314)
.....+|+|+.... . ..+....+.|++||++++.....
T Consensus 203 ~~~~~~g~Dvvid~~g-----~--~~~~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 203 ELTDGKKCPVVYDGVG-----Q--DTWLTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp HHTTTCCEEEEEESSC-----G--GGHHHHHTTEEEEEEEEECCCTT
T ss_pred HHhCCCCceEEEECCC-----h--HHHHHHHHHhcCCCEEEEEecCC
Confidence 11246888875433 1 35778889999999999876543
No 350
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.73 E-value=0.058 Score=48.12 Aligned_cols=99 Identities=16% Similarity=0.212 Sum_probs=63.5
Q ss_pred HHHhccCCCCeEEEEcCc--ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC----
Q 021344 159 QEYFKSAQGGLLVDVSCG--SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---- 232 (314)
Q Consensus 159 ~~~l~~~~~~~iLDiGcG--~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp---- 232 (314)
.+.....++.+||-+|+| .|..+..+++.. +.+|+++|.++..++.+++. + .. ..+ |.....
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----g----a~-~~~--~~~~~~~~~~ 204 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL----G----AA-YVI--DTSTAPLYET 204 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH----T----CS-EEE--ETTTSCHHHH
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC----C----Cc-EEE--eCCcccHHHH
Confidence 344566789999999987 477777777653 23999999999888888762 1 11 122 222211
Q ss_pred ----CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 ----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.....+|+|+.... . ..+.+..+.|++||++++....
T Consensus 205 ~~~~~~~~g~Dvvid~~g-----~--~~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 205 VMELTNGIGADAAIDSIG-----G--PDGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHHHTTTSCEEEEEESSC-----H--HHHHHHHHTEEEEEEEEECCCT
T ss_pred HHHHhCCCCCcEEEECCC-----C--hhHHHHHHHhcCCCEEEEEeec
Confidence 11236888875432 1 1234455899999999987643
No 351
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.69 E-value=0.016 Score=52.09 Aligned_cols=72 Identities=11% Similarity=0.045 Sum_probs=54.1
Q ss_pred CCeEEEEcCcccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---CCCchhhhe
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVDAVH 242 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~---~~~~fD~V~ 242 (314)
..+++|+-||.|.+...+...|.. ..++++|+++.+++..+.+.. +..++.+|+.++.. +...+|+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~--------~~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP--------HTQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--------TSCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc--------ccccccCCHHHccHhHcCcCCcCEEE
Confidence 357999999999999999998731 368999999999999888652 34467788876531 112589888
Q ss_pred ecch
Q 021344 243 AGAA 246 (314)
Q Consensus 243 ~~~v 246 (314)
...-
T Consensus 74 ~gpP 77 (343)
T 1g55_A 74 MSPP 77 (343)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 7543
No 352
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.64 E-value=0.053 Score=47.72 Aligned_cols=107 Identities=13% Similarity=0.094 Sum_probs=61.9
Q ss_pred CCCeEEEEcCcccHHHHHH----HHhCCCCe--EEEEeCCH---------HHHHHHHHHHHhcCCC--CCCCeEEEEecC
Q 021344 166 QGGLLVDVSCGSGLFSRKF----AKSGTYSG--VVALDFSE---------NMLRQCYDFIKQDNTI--LTSNLALVRADV 228 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l----~~~~~~~~--v~giD~s~---------~~~~~a~~~~~~~~~~--~~~~v~~~~~d~ 228 (314)
+.-+|||+|-|+|.+.... .+..+..+ ++.+|..+ ...+..+......... ....+++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 3457999999999865432 23344444 56666421 1111122222211000 113456778887
Q ss_pred CC-CC-CCCCchhhheecchhccCCCH----HHHHHHHHhhcccCcEEEEE
Q 021344 229 CR-LP-FASGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 229 ~~-lp-~~~~~fD~V~~~~vl~h~~d~----~~~l~~i~r~LkpGG~l~i~ 273 (314)
.+ ++ +.+.+||+|+... +.--.+| ..+++.++++++|||+++..
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTY 225 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSY 225 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEES
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEE
Confidence 44 33 3345799998753 3333455 48999999999999998643
No 353
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.63 E-value=0.038 Score=50.10 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=63.1
Q ss_pred hccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC----CCCCC
Q 021344 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL----PFASG 236 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l----p~~~~ 236 (314)
....++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++. + .. .++ |..+. ... +
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l----G---a~--~vi--~~~~~~~~~~~~-~ 256 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL----G---AD--EVV--NSRNADEMAAHL-K 256 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----T---CS--EEE--ETTCHHHHHTTT-T
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C---Cc--EEe--ccccHHHHHHhh-c
Confidence 4567789999999986 88888888764 34899999999888888762 1 11 122 11110 011 4
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.+|+|+..-.- ...++...+.|++||++++...
T Consensus 257 g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 257 SFDFILNTVAA------PHNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp CEEEEEECCSS------CCCHHHHHTTEEEEEEEEECCC
T ss_pred CCCEEEECCCC------HHHHHHHHHHhccCCEEEEecc
Confidence 68888754321 1236778899999999987653
No 354
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.61 E-value=0.084 Score=47.68 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=65.2
Q ss_pred HHhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC--CCC-----
Q 021344 160 EYFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV--CRL----- 231 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~--~~l----- 231 (314)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + .. ..+...- .++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~v~ 254 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----G----AT-ECINPQDFSKPIQEVLI 254 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----T----CS-EEECGGGCSSCHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C----Cc-eEeccccccccHHHHHH
Confidence 344567789999999876 78888887764223799999999888888752 1 11 1221110 111
Q ss_pred CCCCCchhhheecchhccCCCHHHHHHHHHhhcccC-cEEEEEec
Q 021344 232 PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSG-GVFVGTTF 275 (314)
Q Consensus 232 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpG-G~l~i~~~ 275 (314)
....+.+|+|+-.- .. ...++...+.|++| |++++...
T Consensus 255 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 255 EMTDGGVDYSFECI-----GN-VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp HHTTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHhCCCCCEEEECC-----Cc-HHHHHHHHHhhccCCcEEEEEec
Confidence 01123688877432 22 34578899999999 99987654
No 355
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.51 E-value=0.1 Score=46.64 Aligned_cols=91 Identities=13% Similarity=0.174 Sum_probs=60.2
Q ss_pred CCCeEEEE-cCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-C-----CCCCCc
Q 021344 166 QGGLLVDV-SCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-L-----PFASGF 237 (314)
Q Consensus 166 ~~~~iLDi-GcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-l-----p~~~~~ 237 (314)
++.+||-+ |+|. |..+..+++.. ..+|+++|.++..++.+++. + .. ..+ |..+ + ....+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G---a~--~vi--~~~~~~~~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM----G---AD--IVL--NHKESLLNQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH----T---CS--EEE--CTTSCHHHHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C---Cc--EEE--ECCccHHHHHHHhCCCC
Confidence 68899999 4554 88888887764 34999999999988888773 1 11 111 1111 1 011235
Q ss_pred hhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+|+|+.... ....++...+.|++||+++...
T Consensus 218 ~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 218 VDYVFCTFN------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEEEEESSC------HHHHHHHHHHHEEEEEEEEESS
T ss_pred ccEEEECCC------chHHHHHHHHHhccCCEEEEEC
Confidence 888775321 3456788999999999997643
No 356
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.50 E-value=0.11 Score=46.34 Aligned_cols=98 Identities=10% Similarity=0.004 Sum_probs=63.7
Q ss_pred HHhccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-CC---
Q 021344 160 EYFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PF--- 233 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l-p~--- 233 (314)
+.....++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++.+ + .. ..+ |..+. .+
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~---g----~~-~~~--d~~~~~~~~~~ 217 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF---G----FD-DAF--NYKEESDLTAA 217 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS---C----CS-EEE--ETTSCSCSHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C----Cc-eEE--ecCCHHHHHHH
Confidence 3445667899999997 4588777777653 239999999998887776321 1 11 112 33221 11
Q ss_pred ----CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 ----ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ----~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..+.+|+|+.... ...+....+.|++||++++...
T Consensus 218 ~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 218 LKRCFPNGIDIYFENVG-------GKMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp HHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhCCCCcEEEECCC-------HHHHHHHHHHHhcCCEEEEEcc
Confidence 1235788775432 1368889999999999987654
No 357
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.10 E-value=0.11 Score=46.48 Aligned_cols=96 Identities=17% Similarity=0.171 Sum_probs=61.9
Q ss_pred hccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CCC-----
Q 021344 162 FKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPF----- 233 (314)
Q Consensus 162 l~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp~----- 233 (314)
....++.+||.+|+ |.|..+..+++.. ..+|+++|.++...+.+++. + .. .. .|..+ ..+
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~----g----~~-~~--~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI----G----GE-VF--IDFTKEKDIVGAVL 232 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT----T----CC-EE--EETTTCSCHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc----C----Cc-eE--EecCccHhHHHHHH
Confidence 35667899999998 4577777766653 23999999988777766651 1 11 11 24331 110
Q ss_pred --CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 --ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 --~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..+.+|+|+.... ....++.+.+.|++||++++...
T Consensus 233 ~~~~~~~D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 233 KATDGGAHGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHTSCEEEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred HHhCCCCCEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 1125777775432 23568889999999999987654
No 358
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.99 E-value=0.12 Score=46.25 Aligned_cols=95 Identities=17% Similarity=0.226 Sum_probs=62.5
Q ss_pred hccCCCCeEEEEcCc--ccHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----
Q 021344 162 FKSAQGGLLVDVSCG--SGLFSRKFAKS--GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (314)
Q Consensus 162 l~~~~~~~iLDiGcG--~G~~~~~l~~~--~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----- 232 (314)
....++.+||-+|+| .|..+..+++. +. +|+++|.++..++.+++. + .. ..+ |..+..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~~~~~~~~~~~~----g----~~-~~~--~~~~~~~~~~~ 232 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVREEAVEAAKRA----G----AD-YVI--NASMQDPLAEI 232 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHh----C----CC-EEe--cCCCccHHHHH
Confidence 556678999999998 46666666554 54 899999999888887652 1 11 112 222211
Q ss_pred --CCC-CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 --FAS-GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 --~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
... +.+|+|+.... ....++...+.|++||++++...
T Consensus 233 ~~~~~~~~~d~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 233 RRITESKGVDAVIDLNN------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp HHHTTTSCEEEEEESCC------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred HHHhcCCCceEEEECCC------CHHHHHHHHHHHhcCCEEEEECC
Confidence 112 46888775432 23467888999999999987654
No 359
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.96 E-value=0.14 Score=45.94 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=62.0
Q ss_pred HhccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC------
Q 021344 161 YFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (314)
Q Consensus 161 ~l~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp------ 232 (314)
.....++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. .. .|..+..
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~--~d~~~~~~~~~~~ 232 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN----G----AH-EV--FNHREVNYIDKIK 232 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EE--EETTSTTHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc----C----CC-EE--EeCCCchHHHHHH
Confidence 345667899999997 4477776666653 24999999999888776551 1 11 11 2332211
Q ss_pred --CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.....+|+|+.... ...+....+.|++||++++..
T Consensus 233 ~~~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 233 KYVGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHcCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 11235888876543 235778889999999998765
No 360
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=93.95 E-value=0.015 Score=40.68 Aligned_cols=30 Identities=23% Similarity=0.600 Sum_probs=22.7
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
..+.||.||+.+.... ..+.+.|+.|++.|
T Consensus 26 ~~y~Cp~CG~~~v~r~---------atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQ---------GTGIWQCSYCDYKF 55 (83)
T ss_dssp SCEECSSSCCEEEEEE---------ETTEEEETTTCCEE
T ss_pred ccCcCCCCCCcceecc---------CCCeEECCCCCCEe
Confidence 3678999999765432 23789999999876
No 361
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.90 E-value=0.13 Score=45.76 Aligned_cols=90 Identities=13% Similarity=0.178 Sum_probs=62.6
Q ss_pred CCeEEEEcCcccHHHHHHHHhCC-CCeE-EEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---CCCchhhh
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGT-YSGV-VALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---ASGFVDAV 241 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~-~~~v-~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~---~~~~fD~V 241 (314)
..+++|+-||.|.+...+...|. ...+ .++|+++.+.+..+.+... . ++.+|+.++.. +...+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~--------~-~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE--------E-VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC--------C-CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC--------C-cccCChhhcCHHHhccCCCCEE
Confidence 45899999999999999998874 2356 7999999999888887632 1 56788877642 22358998
Q ss_pred eecchhccC-----------CCHH-HHHHHHHh-hcc
Q 021344 242 HAGAALHCW-----------PSPS-NAVAEISR-ILR 265 (314)
Q Consensus 242 ~~~~vl~h~-----------~d~~-~~l~~i~r-~Lk 265 (314)
+...-...+ .|+. .++.++.+ +++
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~ 117 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILP 117 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGG
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHH
Confidence 865433322 3444 45666666 554
No 362
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=93.85 E-value=0.024 Score=38.72 Aligned_cols=39 Identities=31% Similarity=0.594 Sum_probs=22.4
Q ss_pred CeeeccCCCccc-----hhcCCCCcccccc-----------ccCceecCCCCccc
Q 021344 59 DLFSCPICYEPL-----IRKGPTGLTLGAI-----------YRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l-----~~~~~~~~~~~~i-----------~~~~l~C~~C~~~~ 97 (314)
.+-.||+||+++ +.+-..-.+..++ .+-.+.|+.||..|
T Consensus 7 ~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEF 61 (95)
T 2k5c_A 7 HMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEF 61 (95)
T ss_dssp -CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEE
T ss_pred ccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHH
Confidence 466799999975 2111111122222 22367999999887
No 363
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.80 E-value=0.077 Score=48.18 Aligned_cols=100 Identities=22% Similarity=0.254 Sum_probs=64.6
Q ss_pred Hhc-cCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecC---CC----C
Q 021344 161 YFK-SAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV---CR----L 231 (314)
Q Consensus 161 ~l~-~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~---~~----l 231 (314)
... ..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. + .. .++..+. .+ +
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----G----a~-~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----G----AD-LTLNRRETSVEERRKAI 259 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc----C----Cc-EEEeccccCcchHHHHH
Confidence 345 66789999999776 88888888764224999999999988888752 1 11 1222110 00 0
Q ss_pred -CC-CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 232 -PF-ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 232 -p~-~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.. ....+|+|+-.-. . ...++...+.|++||++++...
T Consensus 260 ~~~~~g~g~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 260 MDITHGRGADFILEATG-----D-SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHHTTTSCEEEEEECSS-----C-TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHHhCCCCCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 01 1225888875422 1 2357888899999999987654
No 364
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=93.78 E-value=0.018 Score=44.37 Aligned_cols=30 Identities=27% Similarity=0.515 Sum_probs=26.1
Q ss_pred ccccCceecCCCCccccCccceeeeecccC
Q 021344 82 AIYRSGFKCRKCDKTYSSKDNYLDLTVISG 111 (314)
Q Consensus 82 ~i~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 111 (314)
.+.++.+.|+.||+.|++++|+++++....
T Consensus 104 ~v~eg~L~C~~cg~~YPI~dGIP~mL~~ea 133 (141)
T 2j6a_A 104 SIAEGEMKCRNCGHIYYIKNGIPNLLLPPH 133 (141)
T ss_dssp EEEEEEEECTTTCCEEEEETTEESSCCCSS
T ss_pred eccCCEEECCCCCCcccccCCccCcCCcHH
Confidence 466789999999999999999999987643
No 365
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.74 E-value=0.11 Score=46.33 Aligned_cols=98 Identities=16% Similarity=0.093 Sum_probs=63.5
Q ss_pred HHhccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----
Q 021344 160 EYFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----- 232 (314)
+.....++.+||-+|+ |.|..+..+++.. +.+|++++.++...+.+++. + .. ..+..+ .++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~v~~~~-~~~~~~v~~ 221 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV----G----AD-IVLPLE-EGWAKAVRE 221 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----T----CS-EEEESS-TTHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----Cc-EEecCc-hhHHHHHHH
Confidence 4445667899999997 3488888777764 34999999999888877763 1 11 222222 2211
Q ss_pred -CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.....+|+|+....- ..+....+.|++||++++...
T Consensus 222 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 222 ATGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp HTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC--
T ss_pred HhCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEEc
Confidence 112368988854331 247788899999999988653
No 366
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.63 E-value=0.13 Score=45.92 Aligned_cols=95 Identities=16% Similarity=0.086 Sum_probs=63.1
Q ss_pred ccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC--------
Q 021344 163 KSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-------- 232 (314)
Q Consensus 163 ~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-------- 232 (314)
...++.+||-+|+ |.|..+..+++.. ..+|+++|.++..++.+++. + .. ..+ |..+..
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g----a~-~~~--d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL----G----AD-ETV--NYTHPDWPKEVRRL 230 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CS-EEE--ETTSTTHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C----CC-EEE--cCCcccHHHHHHHH
Confidence 4567899999998 4588777777653 23999999999888887652 1 11 112 332211
Q ss_pred CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.....+|+|+.... . ..++.+.+.|++||++++....
T Consensus 231 ~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 231 TGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp TTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESSCC
T ss_pred hCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEecC
Confidence 11236888876543 1 2477888999999999876543
No 367
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.57 E-value=0.17 Score=45.18 Aligned_cols=97 Identities=12% Similarity=0.057 Sum_probs=63.7
Q ss_pred HhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC------
Q 021344 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------ 233 (314)
Q Consensus 161 ~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~------ 233 (314)
.... ++.+||-+|+|. |..+..+++.....+|+++|.++..++.+++. + .. ..+ |..+..+
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----G----a~-~~~--~~~~~~~~~~v~~ 230 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----G----AD-YVI--NPFEEDVVKEVMD 230 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----T----CS-EEE--CTTTSCHHHHHHH
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----C----CC-EEE--CCCCcCHHHHHHH
Confidence 3455 788999999975 77888887764223899999999888888752 1 11 112 2221110
Q ss_pred --CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 --ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 --~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
....+|+|+..-. . ...++.+.+.|++||+++....
T Consensus 231 ~~~g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 231 ITDGNGVDVFLEFSG-----A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HTTTSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred HcCCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 1225888775432 2 3457888999999999987654
No 368
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.50 E-value=0.27 Score=44.20 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=64.6
Q ss_pred HHhccCCCCeEEEEc-Cc-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----
Q 021344 160 EYFKSAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----- 232 (314)
+.....++.+||-+| +| .|..+..+++.. +.+|+++|.+++.++.+++. + .. ..+..+-.++.
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~----G----a~-~~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL----G----CD-RPINYKTEPVGTVLKQ 226 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc----C----Cc-EEEecCChhHHHHHHH
Confidence 444567789999999 34 488888877764 34999999999888887761 1 11 12221111110
Q ss_pred CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
...+.+|+|+.... . ..++.+.+.|++||++++....
T Consensus 227 ~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 227 EYPEGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp HCTTCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCCG
T ss_pred hcCCCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeCC
Confidence 11235788775432 2 4688899999999999876543
No 369
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.50 E-value=0.19 Score=45.24 Aligned_cols=87 Identities=14% Similarity=0.110 Sum_probs=57.5
Q ss_pred CCeEEEEcCcc-cHHHHHHHHh-CCCCeEEEEeCCH---HHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC------C
Q 021344 167 GGLLVDVSCGS-GLFSRKFAKS-GTYSGVVALDFSE---NMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA------S 235 (314)
Q Consensus 167 ~~~iLDiGcG~-G~~~~~l~~~-~~~~~v~giD~s~---~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~------~ 235 (314)
+.+||-+|+|. |..+..+++. |. +|+++|.++ ..++.+++. ..+.+ | .+ .+. .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~~----------ga~~v--~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEET----------KTNYY--N-SS-NGYDKLKDSV 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHHH----------TCEEE--E-CT-TCSHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHHh----------CCcee--c-hH-HHHHHHHHhC
Confidence 88999999865 6666666654 54 999999987 777776652 12333 3 22 211 1
Q ss_pred CchhhheecchhccCCCHHHHH-HHHHhhcccCcEEEEEec
Q 021344 236 GFVDAVHAGAALHCWPSPSNAV-AEISRILRSGGVFVGTTF 275 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l-~~i~r~LkpGG~l~i~~~ 275 (314)
+.+|+|+.... .+ ..+ +...+.|++||.+++...
T Consensus 245 ~~~d~vid~~g-----~~-~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 GKFDVIIDATG-----AD-VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCEEEEEECCC-----CC-THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCEEEECCC-----Ch-HHHHHHHHHHHhcCCEEEEEec
Confidence 45888775432 22 235 888999999999987654
No 370
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.47 E-value=0.33 Score=42.74 Aligned_cols=97 Identities=18% Similarity=0.131 Sum_probs=60.0
Q ss_pred HHhccCCCCeEEEEc-Ccc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CCCCCC
Q 021344 160 EYFKSAQGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASG 236 (314)
Q Consensus 160 ~~l~~~~~~~iLDiG-cG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp~~~~ 236 (314)
+.....++.+||-+| +|. |.++..+++.. +.+|++++ ++...+.+++. + .. ..+..+-.+ ..-.-.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~l----G----a~-~~i~~~~~~~~~~~~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKAL----G----AE-QCINYHEEDFLLAIST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHH----T----CS-EEEETTTSCHHHHCCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHc----C----CC-EEEeCCCcchhhhhcc
Confidence 455677899999997 565 88888888774 34899998 55556666552 2 11 122211111 111113
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.+|+|+-.-. . ..+....+.|++||+++...
T Consensus 215 g~D~v~d~~g-----~--~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 215 PVDAVIDLVG-----G--DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp CEEEEEESSC-----H--HHHHHHGGGEEEEEEEEECC
T ss_pred CCCEEEECCC-----c--HHHHHHHHhccCCCEEEEeC
Confidence 5888775322 2 23488899999999998764
No 371
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.41 E-value=0.14 Score=45.63 Aligned_cols=95 Identities=14% Similarity=0.032 Sum_probs=62.2
Q ss_pred HHhccCCCCeEEEEcC-c-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----
Q 021344 160 EYFKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----- 232 (314)
+.....++.+||-+|+ | .|..+..+++.. ..+|+++ .++..++.+++. + ...+. +-.+..
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l----G------a~~i~-~~~~~~~~~~~ 210 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL----G------ATPID-ASREPEDYAAE 210 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH----T------SEEEE-TTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc----C------CCEec-cCCCHHHHHHH
Confidence 3455678899999994 4 488888887764 3499999 888888877652 1 22222 222111
Q ss_pred -CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 233 -FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 233 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.....+|+|+-.-. . ..+....+.|++||.+++..
T Consensus 211 ~~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 211 HTAGQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HHTTSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred HhcCCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 11236888775332 2 46888889999999998754
No 372
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.30 E-value=0.64 Score=35.41 Aligned_cols=91 Identities=11% Similarity=0.098 Sum_probs=60.2
Q ss_pred CCeEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC----CCCchhh
Q 021344 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----ASGFVDA 240 (314)
Q Consensus 167 ~~~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~----~~~~fD~ 240 (314)
..+|+=+|+|. |. ++..|.+.+. +|+++|.+++.++.+++ .++.++.+|..+... .-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRE----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHH----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 45799999987 54 3445555555 99999999998887775 467789999865321 1235676
Q ss_pred heecchhccCCCHH--HHHHHHHhhcccCcEEEEEe
Q 021344 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~ 274 (314)
|+.. +++.. ..+-...+.+.|+..++...
T Consensus 75 vi~~-----~~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 75 LILT-----IPNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EEEC-----CSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEEE-----CCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 6643 23333 23444566677888877655
No 373
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=93.28 E-value=0.041 Score=35.72 Aligned_cols=31 Identities=13% Similarity=0.358 Sum_probs=21.5
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
..+.||.|++.....+. ..+.+.|..||.++
T Consensus 10 ~~~~Cp~C~~~~lv~D~--------~~ge~vC~~CGlVl 40 (58)
T 1dl6_A 10 PRVTCPNHPDAILVEDY--------RAGDMICPECGLVV 40 (58)
T ss_dssp SCCSBTTBSSSCCEECS--------SSCCEECTTTCCEE
T ss_pred ccccCcCCCCCceeEeC--------CCCeEEeCCCCCEE
Confidence 44579999984333221 33789999998776
No 374
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.17 E-value=0.089 Score=46.98 Aligned_cols=96 Identities=8% Similarity=0.109 Sum_probs=62.7
Q ss_pred ccCCCCeEEEEcCcc-cHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEe----cC-CCCCCCC
Q 021344 163 KSAQGGLLVDVSCGS-GLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA----DV-CRLPFAS 235 (314)
Q Consensus 163 ~~~~~~~iLDiGcG~-G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~----d~-~~lp~~~ 235 (314)
.. ++.+||-+|+|. |.++..+++.. ++.+|+++|.++..++.+++. + .+ .++.. |. ..+. ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----G---a~--~vi~~~~~~~~~~~~~-~g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----G---AD--YVSEMKDAESLINKLT-DG 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----T---CS--EEECHHHHHHHHHHHH-TT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----C---CC--EEeccccchHHHHHhh-cC
Confidence 55 789999999976 77777777653 134899999999988888763 1 11 11211 10 0111 12
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..+|+|+..-. . ...++...+.|++||++++...
T Consensus 237 ~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 237 LGASIAIDLVG-----T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp CCEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCccEEEECCC-----C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 26888875432 2 3468888999999999987654
No 375
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.15 E-value=0.22 Score=44.64 Aligned_cols=97 Identities=13% Similarity=0.052 Sum_probs=63.3
Q ss_pred HHhccCCCCeEEEEc-Cc-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC----
Q 021344 160 EYFKSAQGGLLVDVS-CG-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---- 233 (314)
Q Consensus 160 ~~l~~~~~~~iLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~---- 233 (314)
+.....++.+||-+| +| .|..+..+++.. +.+|+++|.++..++.+++. + .. ..+ |..+..+
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~~--~~~~~~~~~~~ 228 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL----G----AK-RGI--NYRSEDFAAVI 228 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CC-EEE--eCCchHHHHHH
Confidence 344566789999995 33 488777777764 34999999999988888763 1 11 122 2222111
Q ss_pred ---CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 ---ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ---~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..+.+|+|+....- ..+....+.|++||++++...
T Consensus 229 ~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 229 KAETGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HHHHSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred HHHhCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 12458888754331 257788899999999987654
No 376
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.13 E-value=0.38 Score=44.69 Aligned_cols=97 Identities=15% Similarity=0.199 Sum_probs=63.3
Q ss_pred hccCCCCeEEEEcC-cc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-------
Q 021344 162 FKSAQGGLLVDVSC-GS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------- 232 (314)
Q Consensus 162 l~~~~~~~iLDiGc-G~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp------- 232 (314)
....++.+||-+|+ |. |.++..+++.. ..++++++.++..++.+++. + . -.++...-.+..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~l----G----a-~~vi~~~~~d~~~~~~~~~ 293 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAM----G----A-EAIIDRNAEGYRFWKDENT 293 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----C-CEEEETTTTTCCSEEETTE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhh----C----C-cEEEecCcCcccccccccc
Confidence 35567899999997 43 88888888764 34899999999988888663 1 1 112211111110
Q ss_pred ----------------CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 ----------------FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 ----------------~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.....+|+|+-.-. ...+....+.|++||++++...
T Consensus 294 ~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G~ 345 (456)
T 3krt_A 294 QDPKEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCAS 345 (456)
T ss_dssp ECHHHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESCC
T ss_pred cchHHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEec
Confidence 01236887775322 2568888999999999988653
No 377
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.09 E-value=0.19 Score=44.36 Aligned_cols=92 Identities=14% Similarity=0.109 Sum_probs=60.2
Q ss_pred eEEEEcC-c-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CCCCCCchhhheecc
Q 021344 169 LLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFASGFVDAVHAGA 245 (314)
Q Consensus 169 ~iLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp~~~~~fD~V~~~~ 245 (314)
+||-+|+ | .|.++..+++.. +.+|+++|.++...+.+++. + ....+-..+... .....+.+|+|+-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~~vi~~~~~~~~~~~~~~~~d~v~d~- 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL----G----ANRILSRDEFAESRPLEKQLWAGAIDT- 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH----T----CSEEEEGGGSSCCCSSCCCCEEEEEES-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CCEEEecCCHHHHHhhcCCCccEEEEC-
Confidence 4999997 4 488888888874 34999999999888888763 1 111111111111 11224568877643
Q ss_pred hhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 246 vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
... ..+....+.|+++|++++....
T Consensus 219 ----~g~--~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 219 ----VGD--KVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp ----SCH--HHHHHHHHTEEEEEEEEECCCT
T ss_pred ----CCc--HHHHHHHHHHhcCCEEEEEecC
Confidence 222 3789999999999999887543
No 378
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=92.97 E-value=0.15 Score=45.37 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=50.5
Q ss_pred CCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC-CCchhhheec
Q 021344 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-SGFVDAVHAG 244 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~-~~~fD~V~~~ 244 (314)
+.+++|+.||.|.+...+...|. ..+.++|+++.+++..+.+.... . .+|+.++... -..+|+|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~------~----~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEK------P----EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCC------C----BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCC------C----cCCHHHcCHhhCCCCCEEEEC
Confidence 46899999999999999999884 36889999999999988876421 1 5777654311 1258888875
No 379
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.96 E-value=0.059 Score=48.50 Aligned_cols=99 Identities=11% Similarity=0.093 Sum_probs=62.3
Q ss_pred hccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCC-CC--CCCCCc
Q 021344 162 FKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC-RL--PFASGF 237 (314)
Q Consensus 162 l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~l--p~~~~~ 237 (314)
....++.+||-+|+|. |.++..+++.. +.+|+++|.++..++.+++. + .. .++..+-. +. ... +.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~l----G---a~--~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM----G---AD--HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH----T---CS--EEEEGGGTSCHHHHSC-SC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc----C---CC--EEEcCcCchHHHHHhh-cC
Confidence 4567789999999875 77777777753 23899999998888888762 1 11 12221111 10 011 46
Q ss_pred hhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+|+|+..-.-. ....++...+.|++||+++....
T Consensus 244 ~D~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 244 FDLIVVCASSL----TDIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp EEEEEECCSCS----TTCCTTTGGGGEEEEEEEEECCC
T ss_pred CCEEEECCCCC----cHHHHHHHHHHhcCCCEEEEecC
Confidence 88887543210 01235667789999999987543
No 380
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.54 E-value=0.15 Score=44.62 Aligned_cols=72 Identities=14% Similarity=0.015 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC----CCchh
Q 021344 165 AQGGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA----SGFVD 239 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~-v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~----~~~fD 239 (314)
....+++|+-||.|.+...+.+.|.... +.++|+++.+.+..+.+. ....++.+|+.++... .+.+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~--------~~~~~~~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH--------QGKIMYVGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT--------TTCEEEECCGGGCCHHHHHHTCCCS
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC--------CCCceeCCChHHccHHHhcccCCcC
Confidence 3456899999999999999999886433 699999999888776643 3446788898776421 13589
Q ss_pred hheec
Q 021344 240 AVHAG 244 (314)
Q Consensus 240 ~V~~~ 244 (314)
+++..
T Consensus 86 ll~gg 90 (295)
T 2qrv_A 86 LVIGG 90 (295)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 88864
No 381
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=92.39 E-value=0.046 Score=34.28 Aligned_cols=34 Identities=21% Similarity=0.355 Sum_probs=22.4
Q ss_pred cCCCCeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 55 ELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 55 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
......--||.||+...... ....+.|.+||..+
T Consensus 14 kv~~~~k~CP~CG~~~fm~~---------~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 14 KVIRKNKFCPRCGPGVFMAD---------HGDRWACGKCGYTE 47 (50)
T ss_dssp CEECSSEECSSSCSSCEEEE---------CSSEEECSSSCCEE
T ss_pred EEEEecccCCCCCCceEEec---------CCCeEECCCCCCEE
Confidence 33444556999999653321 12679999998765
No 382
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.35 E-value=0.26 Score=43.44 Aligned_cols=95 Identities=12% Similarity=0.119 Sum_probs=61.8
Q ss_pred HhccCCCCeEEEEcC--cccHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----
Q 021344 161 YFKSAQGGLLVDVSC--GSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (314)
Q Consensus 161 ~l~~~~~~~iLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----- 232 (314)
.....++.+||-+|+ |.|..+..+++. |. +|+++|.++..++.+++. + .. ..+ |..+..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~~----g----~~-~~~--~~~~~~~~~~~ 201 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKA----G----AW-QVI--NYREEDLVERL 201 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc----C----CC-EEE--ECCCccHHHHH
Confidence 345667899999994 447766666554 54 999999999888877652 1 11 112 332211
Q ss_pred ---CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 ---FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.....+|+|+.... ...++...+.|++||++++...
T Consensus 202 ~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 202 KEITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HHHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HHHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 11235888875533 2457888999999999987654
No 383
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.28 E-value=0.087 Score=47.37 Aligned_cols=97 Identities=16% Similarity=0.119 Sum_probs=59.7
Q ss_pred hccC-CCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC---CCCCCC
Q 021344 162 FKSA-QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR---LPFASG 236 (314)
Q Consensus 162 l~~~-~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~---lp~~~~ 236 (314)
.... ++.+||-+|+|. |.++..+++.. ..+|+++|.+++.++.+++.+ + ... ++ |..+ +.-..+
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~l---G---a~~--vi--~~~~~~~~~~~~~ 243 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDL---G---ADD--YV--IGSDQAKMSELAD 243 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTS---C---CSC--EE--ETTCHHHHHHSTT
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHc---C---Cce--ee--ccccHHHHHHhcC
Confidence 3455 789999999876 77777777763 238999999987777665321 1 111 11 1111 000013
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.+|+|+-.-.-. ..++...+.|++||+++....
T Consensus 244 g~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 244 SLDYVIDTVPVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp TEEEEEECCCSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred CCCEEEECCCCh------HHHHHHHHHhccCCEEEEeCC
Confidence 588877532211 125667789999999988654
No 384
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.26 E-value=0.63 Score=41.54 Aligned_cols=99 Identities=11% Similarity=-0.018 Sum_probs=63.5
Q ss_pred HHhccCCC--CeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC---
Q 021344 160 EYFKSAQG--GLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP--- 232 (314)
Q Consensus 160 ~~l~~~~~--~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp--- 232 (314)
+.....++ .+||-.|+ |.|..+..+++.....+|+++|.++..++.+++.+ + .. .. .|..+..
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g----~~-~~--~d~~~~~~~~ 221 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---G----FD-AA--INYKKDNVAE 221 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---C----CS-EE--EETTTSCHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---C----Cc-eE--EecCchHHHH
Confidence 44556678 89999998 34777777776542238999999988777665421 1 11 11 2332211
Q ss_pred ----CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 ----FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
...+.+|+|+.... ...++...+.|++||++++...
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 11125787775433 2568889999999999987654
No 385
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.25 E-value=0.37 Score=43.82 Aligned_cols=77 Identities=13% Similarity=0.147 Sum_probs=47.3
Q ss_pred CCCeEEEEcCcccHHHHHHHHhC-------CCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCch
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSG-------TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFV 238 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~-------~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~f 238 (314)
..-.|+|+|.|.|.++..+.+.. ...+++.||+|+...+.=++.+... .++.+. .++.++|. + .
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~-----~~v~W~-~~l~~lp~--~-~ 150 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-----RNIHWH-DSFEDVPE--G-P 150 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-----SSEEEE-SSGGGSCC--S-S
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-----CCeEEe-CChhhcCC--C-C
Confidence 34579999999999987776531 2348999999998776555544321 245554 23344441 1 3
Q ss_pred hhheecchhccCC
Q 021344 239 DAVHAGAALHCWP 251 (314)
Q Consensus 239 D~V~~~~vl~h~~ 251 (314)
-+|+++.+|.-+|
T Consensus 151 ~~viANE~fDAlP 163 (387)
T 1zkd_A 151 AVILANEYFDVLP 163 (387)
T ss_dssp EEEEEESSGGGSC
T ss_pred eEEEeccccccCc
Confidence 3555665555543
No 386
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=92.23 E-value=0.31 Score=43.66 Aligned_cols=96 Identities=10% Similarity=-0.016 Sum_probs=61.6
Q ss_pred HhccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC------
Q 021344 161 YFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP------ 232 (314)
Q Consensus 161 ~l~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp------ 232 (314)
.....++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++. + .. .. .|..+..
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----~~-~~--~~~~~~~~~~~~~ 224 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL----G----AA-AG--FNYKKEDFSEATL 224 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----T----CS-EE--EETTTSCHHHHHH
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc----C----Cc-EE--EecCChHHHHHHH
Confidence 345567899999984 4477776666653 34999999999888887542 1 11 11 2322211
Q ss_pred --CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 --FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
...+.+|+|+.... .+ .+....+.|++||++++...
T Consensus 225 ~~~~~~~~d~vi~~~G-----~~--~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 225 KFTKGAGVNLILDCIG-----GS--YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HHTTTSCEEEEEESSC-----GG--GHHHHHHHEEEEEEEEECCC
T ss_pred HHhcCCCceEEEECCC-----ch--HHHHHHHhccCCCEEEEEec
Confidence 11235888775433 12 47778899999999988654
No 387
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.97 E-value=0.13 Score=45.94 Aligned_cols=96 Identities=13% Similarity=0.049 Sum_probs=62.3
Q ss_pred HhccCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC------
Q 021344 161 YFKSAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------ 233 (314)
Q Consensus 161 ~l~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~------ 233 (314)
.... ++.+||-+|+|. |..+..+++.....+|+++|.++..++.+++. . -.. .|..+..+
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a---------~~v--~~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A---------DRL--VNPLEEDLLEVVRR 226 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C---------SEE--ECTTTSCHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H---------Hhc--cCcCccCHHHHHHH
Confidence 4455 788999999865 77888888764223899999999877776552 1 011 12221110
Q ss_pred -CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 -ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 -~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..+.+|+|+..- .. ...++...+.|++||++++...
T Consensus 227 ~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 227 VTGSGVEVLLEFS-----GN-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HHSSCEEEEEECS-----CC-HHHHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCCCEEEECC-----CC-HHHHHHHHHHHhcCCEEEEEec
Confidence 123578776432 22 2457888999999999987653
No 388
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.86 E-value=1.5 Score=33.16 Aligned_cols=90 Identities=17% Similarity=0.132 Sum_probs=55.9
Q ss_pred CCeEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC----CCCCchhh
Q 021344 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (314)
Q Consensus 167 ~~~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----~~~~~fD~ 240 (314)
..+|+-+|+|. |. ++..|.+.+. +|+++|.++..++.+++ ..+.++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~----------~~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLED----------EGFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHH----------CCCcEEECCCCCHHHHHhCCcccCCE
Confidence 45799999976 44 4445555565 89999999988877765 35678889986632 11235777
Q ss_pred heecchhccCCCHH--HHHHHHHhhcccCcEEEEEe
Q 021344 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~ 274 (314)
|+..- ++.. ..+....+.+. ...++...
T Consensus 74 vi~~~-----~~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 74 VLITG-----SDDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred EEEec-----CCHHHHHHHHHHHHHhC-CceEEEEE
Confidence 76532 2332 23344445555 55555544
No 389
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.70 E-value=0.73 Score=36.74 Aligned_cols=91 Identities=13% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCeEEEEcCcc-cH-HHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC----C-CCCch
Q 021344 167 GGLLVDVSCGS-GL-FSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----F-ASGFV 238 (314)
Q Consensus 167 ~~~iLDiGcG~-G~-~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----~-~~~~f 238 (314)
+.+|+-+|+|. |. ++..|.+. +. +|+++|.++..++.+++ .++..+.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~----------~g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRS----------EGRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHH----------TTCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHH----------CCCCEEEcCCCCHHHHHhccCCCCC
Confidence 56899999986 54 44555666 65 89999999988777654 34566777875421 1 12357
Q ss_pred hhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEe
Q 021344 239 DAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 239 D~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~ 274 (314)
|+|+.. +++.. ..+-...+.+.|++.++...
T Consensus 107 d~vi~~-----~~~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLA-----MPHHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEEC-----CSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEe-----CCChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 877753 23332 22334455666777877755
No 390
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=91.53 E-value=0.072 Score=34.36 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=23.8
Q ss_pred eeeccCCCccchhc-CCCCccccccccCceecCCCCcccc
Q 021344 60 LFSCPICYEPLIRK-GPTGLTLGAIYRSGFKCRKCDKTYS 98 (314)
Q Consensus 60 ~l~CP~C~~~l~~~-~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (314)
...||.||...... ..+....++.+.-.+.|.+||+.|.
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~ 54 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWR 54 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEE
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEec
Confidence 67899999853211 1011123344556789999998874
No 391
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.46 E-value=0.17 Score=45.64 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=59.8
Q ss_pred hccC-CCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC---CCCCC
Q 021344 162 FKSA-QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL---PFASG 236 (314)
Q Consensus 162 l~~~-~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l---p~~~~ 236 (314)
.... ++.+||-+|+|. |..+..+++.. +.+|+++|.++..++.+++.+ + .. ..+ |..+. .-..+
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~l---G----a~-~v~--~~~~~~~~~~~~~ 250 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNF---G----AD-SFL--VSRDQEQMQAAAG 250 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTS---C----CS-EEE--ETTCHHHHHHTTT
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhc---C----Cc-eEE--eccCHHHHHHhhC
Confidence 3455 788999999876 77777777764 349999999988777665321 1 11 122 22211 00013
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.+|+|+..-... ..++...+.|++||+++....
T Consensus 251 ~~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 251 TLDGIIDTVSAV------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp CEEEEEECCSSC------CCSHHHHHHEEEEEEEEECCC
T ss_pred CCCEEEECCCcH------HHHHHHHHHHhcCCEEEEEcc
Confidence 588887543211 125567788999999887654
No 392
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.45 E-value=0.12 Score=46.24 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=51.3
Q ss_pred CeEEEEcCcccHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC---CCCCchhhhee
Q 021344 168 GLLVDVSCGSGLFSRKFAKSGTY-SGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---FASGFVDAVHA 243 (314)
Q Consensus 168 ~~iLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp---~~~~~fD~V~~ 243 (314)
-+++|+-||.|.+...+...|.. ..+.++|+++.+.+..+.+.. ...++.+|+.++. ++...+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~--------~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP--------ETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--------TSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC--------CCceeccccccCCHHHhccCCCCEEEe
Confidence 47999999999999999988742 357899999999888877642 3346678887653 22235888886
Q ss_pred c
Q 021344 244 G 244 (314)
Q Consensus 244 ~ 244 (314)
.
T Consensus 76 g 76 (333)
T 4h0n_A 76 S 76 (333)
T ss_dssp C
T ss_pred c
Confidence 4
No 393
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=91.28 E-value=0.11 Score=39.04 Aligned_cols=31 Identities=23% Similarity=0.561 Sum_probs=25.1
Q ss_pred CCeeeccCCCccchhcCCCCccccccccCceecCCCCcccc
Q 021344 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (314)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (314)
..+-.||.|+++..-.+. ..+.|+.|++.|.
T Consensus 25 ~~lP~CP~C~seytYeDg----------~l~vCPeC~hEW~ 55 (138)
T 2akl_A 25 STLPPCPQCNSEYTYEDG----------ALLVCPECAHEWS 55 (138)
T ss_dssp CCSCCCTTTCCCCCEECS----------SSEEETTTTEEEC
T ss_pred ccCCCCCCCCCcceEecC----------CeEECCccccccC
Confidence 346779999999866554 5799999999994
No 394
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.13 E-value=0.36 Score=43.52 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=57.9
Q ss_pred cCCCCeEEEEc-Ccc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----CCC
Q 021344 164 SAQGGLLVDVS-CGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----ASG 236 (314)
Q Consensus 164 ~~~~~~iLDiG-cG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~~~ 236 (314)
..++.+||-+| +|. |..+..+++.. +.+|++++ ++...+.+++ .+ .. ..+ |..+..+ ..+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~----lG----a~-~v~--~~~~~~~~~~~~~~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRK----LG----AD-DVI--DYKSGSVEEQLKSLK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHH----TT----CS-EEE--ETTSSCHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHH----cC----CC-EEE--ECCchHHHHHHhhcC
Confidence 56789999999 454 88888887764 34899998 6666666644 11 11 112 2221111 113
Q ss_pred chhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 237 FVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 237 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.+|+|+-. ...+...+....+.|++||+++...
T Consensus 248 g~D~vid~-----~g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 248 PFDFILDN-----VGGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CBSEEEES-----SCTTHHHHGGGGBCSSSCCEEEESC
T ss_pred CCCEEEEC-----CCChhhhhHHHHHhhcCCcEEEEeC
Confidence 57877643 2333345677888999999998765
No 395
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=91.08 E-value=0.11 Score=34.93 Aligned_cols=30 Identities=23% Similarity=0.692 Sum_probs=21.8
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
.-+.||.|+..-..... .+++.|..|+..+
T Consensus 25 ~ky~C~fCgk~~vkR~a---------~GIW~C~~C~~~~ 54 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKRGA---------AGIWTCSCCKKTV 54 (72)
T ss_dssp SCBCCSSCCSSCBSBCS---------SSCBCCSSSCCCC
T ss_pred cCccCCCCCCceeEecC---------CCeEECCCCCCEE
Confidence 35679999987543222 2789999998776
No 396
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.98 E-value=0.96 Score=38.25 Aligned_cols=101 Identities=21% Similarity=0.299 Sum_probs=66.5
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
.++++|-.|++.|- .+..|++.|. +|+.+|.++..++...+.+. .++.++.+|+.+...
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEFG-------PRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHG-------GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-------CcceEEEccCCCHHHHHHHHHHHH
Confidence 46789999987653 5666777776 99999999887776665441 578899999876421
Q ss_pred -CCCchhhheecchhccCC-----CH--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 234 -ASGFVDAVHAGAALHCWP-----SP--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 -~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.-+..|+++.+..+.... ++ ..+.+.+.+.++++|.++....
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 013578877654433221 11 1245666677777888776553
No 397
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.85 E-value=1.2 Score=38.00 Aligned_cols=103 Identities=20% Similarity=0.199 Sum_probs=68.3
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s------------~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.++++|-.|++.|- .+..|++.|. +|+.+|.+ ...++.+...+...+ .++.++.+|+.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG----RKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT----SCEEEEECCTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhcC----CceEEEEccCCC
Confidence 46789999987652 5666777776 99999987 666666666555543 689999999976
Q ss_pred CCC-----C-----CCchhhheecchhccCC---CH--------------HHHHHHHHhhcccCcEEEEEe
Q 021344 231 LPF-----A-----SGFVDAVHAGAALHCWP---SP--------------SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 231 lp~-----~-----~~~fD~V~~~~vl~h~~---d~--------------~~~l~~i~r~LkpGG~l~i~~ 274 (314)
... . -+..|+++.+..+.... +. ..+++.+.+.++.+|.++...
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 421 0 13678888765543221 11 134566777777888877655
No 398
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.74 E-value=0.78 Score=42.36 Aligned_cols=98 Identities=19% Similarity=0.160 Sum_probs=62.4
Q ss_pred hccCCCCeEEEEcC-c-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEE--ecCCCC------
Q 021344 162 FKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR--ADVCRL------ 231 (314)
Q Consensus 162 l~~~~~~~iLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~--~d~~~l------ 231 (314)
....++.+||-+|+ | .|..+..+++.. ..++++++.++..++.+++. + ....+.. .|....
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l----G----a~~~i~~~~~~~~~~~~~~~~ 286 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL----G----CDLVINRAELGITDDIADDPR 286 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CCCEEEHHHHTCCTTGGGCHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C----CCEEEeccccccccccccccc
Confidence 45667899999997 4 388887777764 34899999999888888652 1 1111111 111000
Q ss_pred --------------CCCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 232 --------------PFASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 232 --------------p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
......+|+|+-... . ..++...+.|++||.+++...
T Consensus 287 ~~~~~~~~~~~~v~~~~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 287 RVVETGRKLAKLVVEKAGREPDIVFEHTG-----R--VTFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSEEEECSC-----H--HHHHHHHHHSCTTCEEEESCC
T ss_pred ccchhhhHHHHHHHHHhCCCceEEEECCC-----c--hHHHHHHHHHhcCCEEEEEec
Confidence 001235888775432 1 357888899999999988653
No 399
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.66 E-value=0.25 Score=43.63 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=59.4
Q ss_pred ccCCCC-eEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEe-cC-CC--CCCCC
Q 021344 163 KSAQGG-LLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DV-CR--LPFAS 235 (314)
Q Consensus 163 ~~~~~~-~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~-d~-~~--lp~~~ 235 (314)
...++. +||-+|+ |.|..+..+++.. +.+|++++.+++.++.+++. + ... .+.. +. .+ .....
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l----G---a~~--~i~~~~~~~~~~~~~~~ 214 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVL----G---AKE--VLAREDVMAERIRPLDK 214 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHT----T---CSE--EEECC---------CCS
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc----C---CcE--EEecCCcHHHHHHHhcC
Confidence 344554 8999997 4488888887764 34899999998877777652 1 111 1111 11 00 01123
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+.+|+|+-.-. . ..+....+.|++||++++...
T Consensus 215 ~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 215 QRWAAAVDPVG-----G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CCEEEEEECST-----T--TTHHHHHHTEEEEEEEEECSC
T ss_pred CcccEEEECCc-----H--HHHHHHHHhhccCCEEEEEee
Confidence 46888775432 2 247788899999999987654
No 400
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=90.65 E-value=1.6 Score=38.37 Aligned_cols=78 Identities=15% Similarity=0.205 Sum_probs=55.2
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
.+++||-.|++.|- ++..|++.|. +|++++.++..++.+.+.+...+ ...++.++.+|+.+...
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEG--SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46789999987653 5666777776 99999999988887777666543 12378999999976320
Q ss_pred -CCCchhhheecchh
Q 021344 234 -ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 -~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 83 ~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 83 ARFGPVSILCNNAGV 97 (319)
T ss_dssp HHTCCEEEEEECCCC
T ss_pred HhCCCCCEEEECCCc
Confidence 01357888876554
No 401
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.60 E-value=0.42 Score=44.04 Aligned_cols=46 Identities=11% Similarity=0.244 Sum_probs=35.1
Q ss_pred CCeEEEEcCcccHHHHHHHHh----CC-CCeEEEEeCCHHHHHHHHHHHHh
Q 021344 167 GGLLVDVSCGSGLFSRKFAKS----GT-YSGVVALDFSENMLRQCYDFIKQ 212 (314)
Q Consensus 167 ~~~iLDiGcG~G~~~~~l~~~----~~-~~~v~giD~s~~~~~~a~~~~~~ 212 (314)
...|+|+|.|.|.++..+.+. .+ ..+++.||+|+...+.=++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 468999999999987776543 21 23799999999887777777654
No 402
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=90.47 E-value=0.087 Score=32.98 Aligned_cols=40 Identities=18% Similarity=0.376 Sum_probs=24.9
Q ss_pred CCeeeccCCCccchh-cCCCCccccccccCceecCCCCccc
Q 021344 58 GDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 58 ~~~l~CP~C~~~l~~-~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
.....||.|+..... ........++.+.-.+.|.+||+.|
T Consensus 7 t~~~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~w 47 (50)
T 1tfi_A 7 TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 47 (50)
T ss_dssp CCCSCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEE
T ss_pred eCccCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCeE
Confidence 456789999985321 0111123344555688999999876
No 403
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.32 E-value=2 Score=36.45 Aligned_cols=105 Identities=21% Similarity=0.239 Sum_probs=67.6
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC--------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-------- 233 (314)
.++++|-.|++.|- .+..|++.|. +|+.++. +....+...+.++..+ .++.++.+|+.+...
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKALG----SDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHH
Confidence 46788988877653 5666777776 8888775 4555666555555543 678999999976421
Q ss_pred --CCCchhhheecchhccCC-----CH--------------HHHHHHHHhhcccCcEEEEEecc
Q 021344 234 --ASGFVDAVHAGAALHCWP-----SP--------------SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 234 --~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.-+..|+++.+..+.+.. ++ ..+.+.+.+.++++|.++.....
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 013578887655443321 11 13466777888888888776543
No 404
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.29 E-value=0.22 Score=48.79 Aligned_cols=108 Identities=17% Similarity=0.122 Sum_probs=64.8
Q ss_pred CCCeEEEEcCcccHHHHHHHHhC------------CCCeEEEEeC---CHHHHHHHHH-----------HHHhcCCC---
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSG------------TYSGVVALDF---SENMLRQCYD-----------FIKQDNTI--- 216 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~------------~~~~v~giD~---s~~~~~~a~~-----------~~~~~~~~--- 216 (314)
+.-+|||+|-|+|.+.....+.. ....++++|. +.+.+..+-+ ....-...
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34589999999999765554431 1235899998 7777664432 11111000
Q ss_pred --------CCCCeEEEEecCCC-CC-C--C-CCchhhheecchhccCCCH----HHHHHHHHhhcccCcEEEEEe
Q 021344 217 --------LTSNLALVRADVCR-LP-F--A-SGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 217 --------~~~~v~~~~~d~~~-lp-~--~-~~~fD~V~~~~vl~h~~d~----~~~l~~i~r~LkpGG~l~i~~ 274 (314)
....+++..+|+.+ ++ + . ...||+++... +.--.+| ..+++.+.++++|||.+...+
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 01335566677643 22 1 1 35799998743 2212234 478999999999999976443
No 405
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.23 E-value=1.8 Score=37.40 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=65.5
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC--------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSEN-MLRQCYDFIKQDNTILTSNLALVRADVCRLPF-------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~-~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-------- 233 (314)
.++++|-.|++.|- ++..|++.|. +|+.++.+.. ..+...+..+..+ .++.++.+|+.+...
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKEG----VKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTTT----CCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999987652 5666777776 8999998754 3444444444433 688999999976320
Q ss_pred --CCCchhhheecchhccCC------CH--------------HHHHHHHHhhcccCcEEEEEe
Q 021344 234 --ASGFVDAVHAGAALHCWP------SP--------------SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 234 --~~~~fD~V~~~~vl~h~~------d~--------------~~~l~~i~r~LkpGG~l~i~~ 274 (314)
.-+..|+++.+....+.. +. ..+++.+.+.++.+|.++...
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 013578887654332211 11 135667777888888877655
No 406
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.19 E-value=1.3 Score=40.69 Aligned_cols=93 Identities=14% Similarity=0.176 Sum_probs=62.6
Q ss_pred CCeEEEEcCcc-cHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC----CCCCchhh
Q 021344 167 GGLLVDVSCGS-GLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (314)
Q Consensus 167 ~~~iLDiGcG~-G~~-~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----~~~~~fD~ 240 (314)
..+|+-+|+|. |.. +..|.+.+. .|+++|.++..++.+++ .++.++.+|..+.. ..-+..|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~----------~g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRK----------FGMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHH----------TTCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHh----------CCCeEEEcCCCCHHHHHhcCCCccCE
Confidence 45799999876 543 344444454 89999999999988876 45678999987742 12235776
Q ss_pred heecchhccCCCHH--HHHHHHHhhcccCcEEEEEecc
Q 021344 241 VHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 241 V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
|++.- ++.. ..+....+.+.|...++.....
T Consensus 72 viv~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 72 LINAI-----DDPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp EEECC-----SSHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred EEECC-----CChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 66532 3443 3455666777888888776643
No 407
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.02 E-value=2.3 Score=36.47 Aligned_cols=77 Identities=17% Similarity=0.174 Sum_probs=54.4
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCC-CC--------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRL-PF-------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~l-p~-------- 233 (314)
.++++|-.|++.|- ++..|++.|. +|++++.++...+.+.+.+...+ ..++.++.+|+.+. ..
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN---HENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT---CCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEccCCCcHHHHHHHHHHH
Confidence 36788988877652 5666666776 99999999988777777666543 35799999999775 20
Q ss_pred --CCCchhhheecchh
Q 021344 234 --ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 --~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 86 ~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 86 KTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 01368888876554
No 408
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.94 E-value=0.26 Score=43.56 Aligned_cols=96 Identities=11% Similarity=0.073 Sum_probs=60.0
Q ss_pred ccCCCC-eEEEEcC-c-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEe-cC--CC-CCCCC
Q 021344 163 KSAQGG-LLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRA-DV--CR-LPFAS 235 (314)
Q Consensus 163 ~~~~~~-~iLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~-d~--~~-lp~~~ 235 (314)
...++. +||-+|+ | .|..+..+++.. +.++++++.+++.++.+++. + ... .+.. +. .. .....
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l----G---a~~--v~~~~~~~~~~~~~~~~ 215 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL----G---ASE--VISREDVYDGTLKALSK 215 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH----T---CSE--EEEHHHHCSSCCCSSCC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C---CcE--EEECCCchHHHHHHhhc
Confidence 344554 8999997 4 488777777653 23899999988777777652 1 111 1211 11 11 11223
Q ss_pred CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 236 GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 236 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+.+|+|+-.- .. ..+....+.|++||++++...
T Consensus 216 ~~~d~vid~~-----g~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 216 QQWQGAVDPV-----GG--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CCEEEEEESC-----CT--HHHHHHHTTEEEEEEEEECCC
T ss_pred CCccEEEECC-----cH--HHHHHHHHhhcCCCEEEEEec
Confidence 4688876532 23 368889999999999987653
No 409
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.92 E-value=0.16 Score=44.34 Aligned_cols=92 Identities=17% Similarity=0.092 Sum_probs=59.2
Q ss_pred cCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCC-CCCC--CCch
Q 021344 164 SAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCR-LPFA--SGFV 238 (314)
Q Consensus 164 ~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-lp~~--~~~f 238 (314)
..++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++. + .. ..+ |..+ ..+. -+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~~--~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL----G----AE-EAA--TYAEVPERAKAWGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT----T----CS-EEE--EGGGHHHHHHHTTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C----CC-EEE--ECCcchhHHHHhcCc
Confidence 567899999998 3488777777764 34999999998887777651 1 11 112 2111 0000 0458
Q ss_pred hhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 239 DAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 239 D~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
|+|+. .. . ..++...+.|++||+++....
T Consensus 191 d~vid-~g-----~--~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 191 DLVLE-VR-----G--KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EEEEE-CS-----C--TTHHHHHTTEEEEEEEEEC--
T ss_pred eEEEE-CC-----H--HHHHHHHHhhccCCEEEEEeC
Confidence 88776 32 2 357888999999999887543
No 410
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.87 E-value=2.9 Score=35.42 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=48.4
Q ss_pred CeEEEEcCcccHHHHHHH----HhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 168 GLLVDVSCGSGLFSRKFA----KSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 168 ~~iLDiGcG~G~~~~~l~----~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
.+||-.|+ |..+..+. +.+. +|++++-++........ .+++++.+|+.++. -..+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~----------~~~~~~~~D~~d~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW--RIIGTSRNPDQMEAIRA----------SGAEPLLWPGEEPS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHHH----------TTEEEEESSSSCCC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHhh----------CCCeEEEecccccc--cCCCCEEEE
Confidence 58999995 66555444 4455 99999998765544433 57899999998866 456898887
Q ss_pred cchhccCCCH
Q 021344 244 GAALHCWPSP 253 (314)
Q Consensus 244 ~~vl~h~~d~ 253 (314)
........++
T Consensus 70 ~a~~~~~~~~ 79 (286)
T 3ius_A 70 STAPDSGGDP 79 (286)
T ss_dssp CCCCBTTBCH
T ss_pred CCCccccccH
Confidence 6554443333
No 411
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.60 E-value=0.58 Score=41.34 Aligned_cols=96 Identities=15% Similarity=0.152 Sum_probs=62.4
Q ss_pred HhccCCCCeEEEEcC--cccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----
Q 021344 161 YFKSAQGGLLVDVSC--GSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF----- 233 (314)
Q Consensus 161 ~l~~~~~~~iLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~----- 233 (314)
.....++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. ..+ |..+..+
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g----~~-~~~--d~~~~~~~~~i~ 207 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL----G----CH-HTI--NYSTQDFAEVVR 207 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T----CS-EEE--ETTTSCHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----CC-EEE--ECCCHHHHHHHH
Confidence 345567889999995 5587776666653 23999999999888777652 1 11 112 3322111
Q ss_pred ---CCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 234 ---ASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ---~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
....+|+|+.... . ..++...+.|++||+++....
T Consensus 208 ~~~~~~~~d~vi~~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 208 EITGGKGVDVVYDSIG-----K--DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHHTTCCEEEEEECSC-----T--TTHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCCCeEEEECCc-----H--HHHHHHHHhhccCCEEEEEec
Confidence 1235888775433 2 457888899999999987654
No 412
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.54 E-value=0.29 Score=48.11 Aligned_cols=108 Identities=20% Similarity=0.178 Sum_probs=65.0
Q ss_pred CCCeEEEEcCcccHHHHHHHHhC-------C-----CCeEEEEeC---CHHHHHHHH-----------HHHHhcCCC---
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSG-------T-----YSGVVALDF---SENMLRQCY-----------DFIKQDNTI--- 216 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~-------~-----~~~v~giD~---s~~~~~~a~-----------~~~~~~~~~--- 216 (314)
+.-+|+|+|.|+|.....+.+.. + ..+++.+|. +.+.+..+- +.+..-...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 44689999999999766654431 1 146899998 555554432 112111000
Q ss_pred --------CCCCeEEEEecCCC-CC-CC---CCchhhheecchhccCCCH----HHHHHHHHhhcccCcEEEEEe
Q 021344 217 --------LTSNLALVRADVCR-LP-FA---SGFVDAVHAGAALHCWPSP----SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 217 --------~~~~v~~~~~d~~~-lp-~~---~~~fD~V~~~~vl~h~~d~----~~~l~~i~r~LkpGG~l~i~~ 274 (314)
....++++.+|+.+ ++ +. ++.+|+++.... .--.|| ..++..+.++++|||.+...+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f-~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGF-APAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSS-CC--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCC-CCCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 01256778888743 22 11 467999987542 111123 578999999999999875433
No 413
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.48 E-value=2.3 Score=36.78 Aligned_cols=103 Identities=11% Similarity=0.137 Sum_probs=66.5
Q ss_pred CCCeEEEEcCcc----cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-------
Q 021344 166 QGGLLVDVSCGS----GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~----G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~------- 233 (314)
.++++|-.|.+. |. ++..|++.|. +|+.++.++...+.+.+..+.. .++.++.+|+.+...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHH
Confidence 467899999763 33 5677777776 8999999876555555544433 368889999976320
Q ss_pred ---CCCchhhheecchhcc----C-----CCH--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 234 ---ASGFVDAVHAGAALHC----W-----PSP--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ---~~~~fD~V~~~~vl~h----~-----~d~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.-+..|+++.+..+.. . .+. ..+.+.+.+.++.+|.++....
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 1146888887654332 0 011 1356667777788888877654
No 414
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.48 E-value=1.7 Score=37.60 Aligned_cols=105 Identities=19% Similarity=0.218 Sum_probs=67.0
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS--ENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s--~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~------- 233 (314)
.++++|-.|++.|- ++..|++.|. +|+.+|.+ ....+...+.++..+ .++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEECG----RKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHTT----CCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHcC----CcEEEEEecCCCHHHHHHHHHH
Confidence 46789999977653 5666777776 89998876 344555555555443 678899999876320
Q ss_pred ---CCCchhhheecchhcc-CC-----CH--------------HHHHHHHHhhcccCcEEEEEecc
Q 021344 234 ---ASGFVDAVHAGAALHC-WP-----SP--------------SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 234 ---~~~~fD~V~~~~vl~h-~~-----d~--------------~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.-+..|+++.+..... .. ++ ..+++.+.+.++++|.++.....
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 0136788887655432 11 11 13566677788888888776543
No 415
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.43 E-value=2.4 Score=36.09 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=66.9
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC--------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS-ENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s-~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-------- 233 (314)
.++++|-.|++.|- ++..|++.|. +|+.++.. ....+...+.++..+ .++.++.+|+.+...
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQAG----GRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999987653 5667777776 88888654 455555555555543 678999999976320
Q ss_pred --CCCchhhheecchhccCC-----CH--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 234 --ASGFVDAVHAGAALHCWP-----SP--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 --~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.-+..|+++.+..+.+.. ++ ..+++.+.+.++++|.++....
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 013578888765443221 11 1356677778888888877653
No 416
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=89.38 E-value=0.2 Score=33.67 Aligned_cols=28 Identities=18% Similarity=0.528 Sum_probs=21.6
Q ss_pred CCeeeccCCCccchhcCCCCccccccccCceecCCCCc
Q 021344 58 GDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDK 95 (314)
Q Consensus 58 ~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~ 95 (314)
.-.+.|+.||..+..... ...+|+.||+
T Consensus 26 ~v~Y~C~~CG~~~e~~~~----------d~irCp~CG~ 53 (70)
T 1twf_L 26 TLKYICAECSSKLSLSRT----------DAVRCKDCGH 53 (70)
T ss_dssp CCCEECSSSCCEECCCTT----------STTCCSSSCC
T ss_pred eEEEECCCCCCcceeCCC----------CCccCCCCCc
Confidence 456899999998655432 4679999998
No 417
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.21 E-value=0.19 Score=45.58 Aligned_cols=102 Identities=18% Similarity=0.161 Sum_probs=56.0
Q ss_pred CCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 166 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 166 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
++.+|+-+|+|. |......++.. +.+|+++|.++..++.+++.+. ..+.....+...+.-.-..+|+|+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g-------~~~~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFC-------GRIHTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTT-------TSSEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcC-------CeeEeccCCHHHHHHHHcCCCEEEEC
Confidence 578999999976 65555444443 2399999999988777665321 12211111111110001247887763
Q ss_pred chhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 245 AALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 245 ~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
-.......+.-+.++..+.+||||+++....
T Consensus 239 ~~~p~~~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 239 VLVPGAKAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCCTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCcCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence 2111111111224566778999999876653
No 418
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.11 E-value=1.6 Score=37.14 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=57.8
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC----------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP---------- 232 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp---------- 232 (314)
.++.+|--|.+.|- .+..|++.|. +|+..|.+++.++...+.+...+ .++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRKG----YDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT----CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHHHHHH
Confidence 47788888887763 5677777776 99999999998888877777755 67889999987632
Q ss_pred CCCCchhhheecchhcc
Q 021344 233 FASGFVDAVHAGAALHC 249 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h 249 (314)
-.-++.|+++.+..+.+
T Consensus 82 ~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 82 AEGIHVDILINNAGIQY 98 (255)
T ss_dssp HTTCCCCEEEECCCCCC
T ss_pred HHCCCCcEEEECCCCCC
Confidence 11246888887655443
No 419
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.06 E-value=0.96 Score=42.51 Aligned_cols=91 Identities=12% Similarity=0.019 Sum_probs=56.4
Q ss_pred cCCCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhe
Q 021344 164 SAQGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (314)
Q Consensus 164 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~ 242 (314)
...+++|+-+|+|. |......++.. +.+|+++|.++...+.+++ ..+.. .++.+. -...|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~----------~Ga~~--~~l~e~---l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMM----------EGFDV--VTVEEA---IGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----------TTCEE--CCHHHH---GGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----------cCCEE--ecHHHH---HhCCCEEE
Confidence 34688999999987 66555555443 2499999999987776654 22332 122111 13578887
Q ss_pred ecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 243 ~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
..-.-.++-+ .+..+.+|+||+++....
T Consensus 335 ~atgt~~~i~-----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 335 TATGNKDIIM-----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp ECSSSSCSBC-----HHHHHHSCTTCEEEECSS
T ss_pred ECCCCHHHHH-----HHHHHhcCCCcEEEEeCC
Confidence 6432222211 256677899999977663
No 420
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=89.01 E-value=2.6 Score=35.89 Aligned_cols=77 Identities=18% Similarity=0.311 Sum_probs=53.6
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeC-------------CHHHHHHHHHHHHhcCCCCCCCeEEEEecCC
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDF-------------SENMLRQCYDFIKQDNTILTSNLALVRADVC 229 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~-------------s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 229 (314)
.++++|-.|++.|- .+..|++.|. +|+.+|. +...++...+.+...+ .++.++.+|+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN----RRIVAAVVDTR 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT----CCEEEEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhcC----CeEEEEECCCC
Confidence 46789999987753 5667777776 9999998 6766666666555543 67899999997
Q ss_pred CCC-----CC-----CCchhhheecchhc
Q 021344 230 RLP-----FA-----SGFVDAVHAGAALH 248 (314)
Q Consensus 230 ~lp-----~~-----~~~fD~V~~~~vl~ 248 (314)
+.. +. -+..|+++.+..+.
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 642 10 13578888765543
No 421
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.92 E-value=0.77 Score=38.79 Aligned_cols=103 Identities=12% Similarity=0.109 Sum_probs=62.7
Q ss_pred CCCeEEEEcCccc---HHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C--
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A-- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~-- 234 (314)
.+++||-.|++.| .++..|++ .+. +|++++.++...+...+.+...+ .++.++.+|+.+... .
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEG----LSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhcC----CeeEEEECCCCCHHHHHHHHHHH
Confidence 3567887775543 13445555 555 89999999877766666655433 578899999876320 0
Q ss_pred ---CCchhhheecchhccCC----C-H--------------HHHHHHHHhhcccCcEEEEEe
Q 021344 235 ---SGFVDAVHAGAALHCWP----S-P--------------SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~----d-~--------------~~~l~~i~r~LkpGG~l~i~~ 274 (314)
-+.+|+|+......... . . ..+++.+.+.++++|.++...
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 12578887654332110 1 1 134556666777778877655
No 422
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=88.88 E-value=0.11 Score=35.98 Aligned_cols=29 Identities=24% Similarity=0.753 Sum_probs=21.3
Q ss_pred eeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
-+.||.|++.-.... ..+.+.|..|+..+
T Consensus 35 ky~CpfCGk~~vkR~---------a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 35 KHTCPVCGRKAVKRI---------STGIWQCQKCGATF 63 (83)
T ss_dssp CBCCSSSCSSCEEEE---------ETTEEEETTTCCEE
T ss_pred ccCCCCCCCceeEec---------CcCeEEcCCCCCEE
Confidence 567999999743321 12789999998876
No 423
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.83 E-value=1.4 Score=37.35 Aligned_cols=106 Identities=14% Similarity=0.224 Sum_probs=67.7
Q ss_pred CCCeEEEEcCc----ccH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC------
Q 021344 166 QGGLLVDVSCG----SGL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA------ 234 (314)
Q Consensus 166 ~~~~iLDiGcG----~G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~------ 234 (314)
.++++|-.|++ -|. ++..|++.|. +|+.++.++...+.+.+..+..+ ..++.++.+|+.+...-
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTLD---RNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTSS---SCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhcC---CCCceEEeCCCCCHHHHHHHHHH
Confidence 46789999976 333 6677777776 89999988766566655555433 23789999999764310
Q ss_pred ----CCchhhheecchhcc----C-----CCHH--------------HHHHHHHhhcccCcEEEEEecc
Q 021344 235 ----SGFVDAVHAGAALHC----W-----PSPS--------------NAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 235 ----~~~fD~V~~~~vl~h----~-----~d~~--------------~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
-+.+|+++.+..+.+ . .+.+ .+++.+...++++|.++.....
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 135787776544322 0 1111 2456677778888888776543
No 424
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.67 E-value=2.3 Score=37.37 Aligned_cols=92 Identities=14% Similarity=0.195 Sum_probs=58.4
Q ss_pred CCeEEEEcCcc--cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 167 GGLLVDVSCGS--GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 167 ~~~iLDiGcG~--G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
..+|.=||+|. |.++..+.+.|...+|+++|.++..++.+++. + .+.-...|..++ .-...|+|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G-----~~~~~~~~~~~~--~~~~aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----G-----IIDEGTTSIAKV--EDFSPDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----T-----SCSEEESCTTGG--GGGCCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----C-----CcchhcCCHHHH--hhccCCEEEEe
Confidence 36899999997 45677777776545899999999888776641 1 111122333220 12347888764
Q ss_pred chhccCCCHHHHHHHHHhhcccCcEEEE
Q 021344 245 AALHCWPSPSNAVAEISRILRSGGVFVG 272 (314)
Q Consensus 245 ~vl~h~~d~~~~l~~i~r~LkpGG~l~i 272 (314)
--.. ....+++++...|++|.+++-
T Consensus 102 vp~~---~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 102 SPVR---TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp SCGG---GHHHHHHHHHHHSCTTCEEEE
T ss_pred CCHH---HHHHHHHHHhhccCCCcEEEE
Confidence 3222 235678889899999876643
No 425
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.46 E-value=0.22 Score=44.94 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=57.9
Q ss_pred CCCeEEEEcCcc-cHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 166 QGGLLVDVSCGS-GLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 166 ~~~~iLDiGcG~-G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
++.+||-+|+|. |.....+++. |. +|+++|.++..++.+++.... .+..+..+...+.-.-..+|+|+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGS-------RVELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-------GSEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCc-------eeEeeeCCHHHHHHHHcCCCEEEE
Confidence 357999999976 6555555444 44 999999999888877765422 222221111111000124788875
Q ss_pred cchhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 244 ~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.-.......+.-+.++..+.+++||+++...+.
T Consensus 237 ~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 237 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCCcCCCCCCeecCHHHHhhCCCCCEEEEEecC
Confidence 433222111111234566789999988876543
No 426
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=88.23 E-value=0.46 Score=42.37 Aligned_cols=97 Identities=14% Similarity=0.059 Sum_probs=55.4
Q ss_pred HHhccCCCCeEEEEcC-c-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----
Q 021344 160 EYFKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----- 232 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----- 232 (314)
+.....++.+||-+|+ | .|.++..+++.....+|++++ ++...+.++ .+ .. .++. +-.++.
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~g---a~--~~~~-~~~~~~~~~~~ 203 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DS---VT--HLFD-RNADYVQEVKR 203 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GG---SS--EEEE-TTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cC---Cc--EEEc-CCccHHHHHHH
Confidence 3455678899999998 3 388888888764345899998 554444443 11 11 2222 111110
Q ss_pred CCCCchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 233 FASGFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
...+.+|+|+-.-. .+ .+....+.|++||++++...
T Consensus 204 ~~~~g~Dvv~d~~g-----~~--~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 204 ISAEGVDIVLDCLC-----GD--NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp HCTTCEEEEEEECC--------------CTTEEEEEEEEEEC-
T ss_pred hcCCCceEEEECCC-----ch--hHHHHHHHhhcCCEEEEECC
Confidence 12346888875322 21 24678899999999998764
No 427
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.17 E-value=2 Score=38.45 Aligned_cols=93 Identities=8% Similarity=0.002 Sum_probs=58.3
Q ss_pred CCCCeEEEEcC-c-ccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----CCCCc
Q 021344 165 AQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FASGF 237 (314)
Q Consensus 165 ~~~~~iLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~~~~~ 237 (314)
.++.+||-+|+ | .|.++..+++.. ..+|+++. ++..++.+++. + . -.++...-.++. ..++.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l----G----a-~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR----G----A-EEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT----T----C-SEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc----C----C-cEEEECCCchHHHHHHHHccCC
Confidence 67889999998 3 588888888874 34888885 78777777652 1 1 122222111110 12344
Q ss_pred hhhheecchhccCCCHHHHHHHHHhhc-ccCcEEEEEe
Q 021344 238 VDAVHAGAALHCWPSPSNAVAEISRIL-RSGGVFVGTT 274 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~i~r~L-kpGG~l~i~~ 274 (314)
+|+|+-. +..+ ..+....+.| ++||+++...
T Consensus 232 ~d~v~d~-----~g~~-~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDC-----ITNV-ESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEES-----SCSH-HHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEEC-----CCch-HHHHHHHHHhhcCCCEEEEEe
Confidence 7777743 2232 4577788888 6999998755
No 428
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.16 E-value=0.29 Score=44.21 Aligned_cols=101 Identities=17% Similarity=0.223 Sum_probs=53.2
Q ss_pred CCCeEEEEcCcc-cHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhee
Q 021344 166 QGGLLVDVSCGS-GLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHA 243 (314)
Q Consensus 166 ~~~~iLDiGcG~-G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~ 243 (314)
++.+|+-+|+|. |..+...+. .|. +|+++|.++..++.+.+.. + ..+.....+...+.-.-..+|+|+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~~---g----~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDVF---G----GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT---T----TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHhc---C----ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 468999999975 554444443 354 9999999998777665422 1 2222111111111000124677765
Q ss_pred cchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 244 GAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 244 ~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.-.......+.-+.++..+.+|+||+++....
T Consensus 236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp CCC-------CCSCHHHHTTSCTTCEEEECC-
T ss_pred CCCCCccccchhHHHHHHHhhcCCCEEEEEec
Confidence 43322101111125667788999998876553
No 429
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=88.14 E-value=0.14 Score=36.17 Aligned_cols=29 Identities=17% Similarity=0.517 Sum_probs=21.1
Q ss_pred eeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
-+.||.|+..-.... ..+.+.|..|+..+
T Consensus 36 ky~CpfCgk~~vkR~---------a~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 36 KYFCEFCGKFAVKRK---------AVGIWGCKDCGKVK 64 (92)
T ss_dssp CBCCTTTCSSCBEEE---------ETTEEECSSSCCEE
T ss_pred cccCcccCCCeeEec---------CcceEEcCCCCCEE
Confidence 467999999743321 12789999998776
No 430
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=88.06 E-value=0.14 Score=37.71 Aligned_cols=30 Identities=23% Similarity=0.627 Sum_probs=21.5
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
.-+.||.|+..-..... .+.+.|..|+..|
T Consensus 59 akytCPfCGk~~vKR~a---------vGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDRQG---------TGIWQCSYCDYKF 88 (116)
T ss_dssp SCEECSSSCCEEEEEEE---------TTEEEETTTCCEE
T ss_pred cCCcCCCCCCceeEecC---------ceeEECCCCCCEE
Confidence 47889999984322111 2789999998876
No 431
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.90 E-value=0.83 Score=38.72 Aligned_cols=104 Identities=14% Similarity=0.112 Sum_probs=65.8
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C--
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A-- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~gi-D~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~-- 234 (314)
.++++|-.|++.|- ++..|++.|. +|+.+ +.+....+...+.++..+ .++.++.+|+.+... .
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKLG----RSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTTT----SCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC----CceEEEEcCCCCHHHHHHHHHHH
Confidence 46789999987753 5666777776 88887 666666666666555543 678899999976421 0
Q ss_pred ---CCchhhheecchhc-c---CC--CH--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 235 ---SGFVDAVHAGAALH-C---WP--SP--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 235 ---~~~fD~V~~~~vl~-h---~~--d~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
-+..|+++.+.... . +. ++ ..+.+.+.+.++++|.++....
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 13578887655322 1 11 11 1345666677777887776553
No 432
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=87.83 E-value=0.21 Score=35.50 Aligned_cols=26 Identities=27% Similarity=0.713 Sum_probs=19.6
Q ss_pred eeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 61 FSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 61 l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
..||.|++++...+ +.+.|..|+..|
T Consensus 33 ~~CP~Cq~eL~~~g-----------~~~hC~~C~~~f 58 (101)
T 2jne_A 33 LHCPQCQHVLDQDN-----------GHARCRSCGEFI 58 (101)
T ss_dssp CBCSSSCSBEEEET-----------TEEEETTTCCEE
T ss_pred ccCccCCCcceecC-----------CEEECccccchh
Confidence 78999999987644 456677777665
No 433
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=87.82 E-value=0.25 Score=33.29 Aligned_cols=31 Identities=32% Similarity=0.695 Sum_probs=23.2
Q ss_pred eeeccCCCccchhcCCCCccccccccCceecCCCCccccCcc
Q 021344 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKD 101 (314)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~ 101 (314)
.+.|| |+......... ....|+ ||......+
T Consensus 4 vv~C~-C~~~~~~~~~~---------kT~~C~-CG~~~~~~k 34 (71)
T 1gh9_A 4 IFRCD-CGRALYSREGA---------KTRKCV-CGRTVNVKD 34 (71)
T ss_dssp EEEET-TSCCEEEETTC---------SEEEET-TTEEEECCS
T ss_pred EEECC-CCCEEEEcCCC---------cEEECC-CCCeeeece
Confidence 57899 99987665533 578999 998875554
No 434
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=87.70 E-value=0.28 Score=30.70 Aligned_cols=25 Identities=28% Similarity=0.527 Sum_probs=19.8
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCcc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKT 96 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~ 96 (314)
+..+||.|++.+.. +.+.|..||+.
T Consensus 13 ~k~iCpkC~a~~~~-------------gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGATNPW-------------GAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCCEECT-------------TCSSCSSSSSC
T ss_pred CCccCCCCCCcCCC-------------CceecCCCCCc
Confidence 56789999998432 78999999765
No 435
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=87.58 E-value=0.15 Score=36.69 Aligned_cols=30 Identities=23% Similarity=0.710 Sum_probs=21.7
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
.-+.||.|+..-.... ..+.+.|..|+..+
T Consensus 35 aky~CpfCgk~~vKR~---------a~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKRA---------AVGIWKCKPCKKII 64 (103)
T ss_dssp SCEECTTTCCEEEEEE---------ETTEEEETTTTEEE
T ss_pred cCCCCCCCCCceeeec---------CcceEEcCCCCCEE
Confidence 3578999998643322 12789999998776
No 436
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=87.38 E-value=0.29 Score=42.77 Aligned_cols=57 Identities=21% Similarity=0.165 Sum_probs=37.8
Q ss_pred CCeEEEEecCCC-CC-CCCCchhhheecchhcc--------------------CCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 219 SNLALVRADVCR-LP-FASGFVDAVHAGAALHC--------------------WPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 219 ~~v~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h--------------------~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.++.++++|..+ ++ +++++||+|+++=-... +.....+++++.++|||||.+++...
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 457888888765 22 45678999988522111 01123567899999999999988753
No 437
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=87.26 E-value=0.37 Score=38.82 Aligned_cols=40 Identities=20% Similarity=0.384 Sum_probs=27.1
Q ss_pred CCeeeccCCCccchhc-CCCCccccccccCceecCCCCccc
Q 021344 58 GDLFSCPICYEPLIRK-GPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 58 ~~~l~CP~C~~~l~~~-~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
+..+.||.|+...... ..+....++.+.-.+.|..||+.|
T Consensus 135 t~~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~w 175 (178)
T 3po3_S 135 TDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRW 175 (178)
T ss_dssp BSSSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCEE
T ss_pred cCCcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCee
Confidence 5678999999864221 112223455666789999999987
No 438
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=87.23 E-value=0.17 Score=35.80 Aligned_cols=30 Identities=23% Similarity=0.665 Sum_probs=21.4
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
.-+.||.|+..-.... ..+.+.|..|+..+
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~C~~~~ 64 (92)
T 3izc_m 35 ARYDCSFCGKKTVKRG---------AAGIWTCSCCKKTV 64 (92)
T ss_dssp SCCCCSSSCSSCCEEE---------ETTEEECTTTCCEE
T ss_pred cCCcCCCCCCceeeec---------ccceEEcCCCCCEE
Confidence 3567999998643321 12789999998776
No 439
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=87.06 E-value=1.2 Score=37.70 Aligned_cols=76 Identities=17% Similarity=0.209 Sum_probs=48.5
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C--
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A-- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~-- 234 (314)
.+++||-.|++.| .++..|++.|. +|++++- ++...+...+.++..+ .++.++.+|+.+... .
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKLG----AQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHHH
Confidence 3568888886543 24555666665 8999998 7776666555555433 578899999876321 0
Q ss_pred ---CCchhhheecchh
Q 021344 235 ---SGFVDAVHAGAAL 247 (314)
Q Consensus 235 ---~~~fD~V~~~~vl 247 (314)
-+.+|+|+.....
T Consensus 94 ~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHSCEEEEECCCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1257877765443
No 440
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.05 E-value=3.3 Score=35.16 Aligned_cols=75 Identities=24% Similarity=0.335 Sum_probs=57.0
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
+++.+|--|.+.|- .+..|++.|. +|+.+|.+++.++...+.++..+ .++.++.+|+.+..-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~g----~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGMG----KEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 47889999988764 5667777776 99999999999888888887765 689999999976320
Q ss_pred -CCCchhhheecch
Q 021344 234 -ASGFVDAVHAGAA 246 (314)
Q Consensus 234 -~~~~fD~V~~~~v 246 (314)
.-++.|+++.+..
T Consensus 80 ~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 80 ETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 1246788876554
No 441
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.00 E-value=0.22 Score=45.63 Aligned_cols=42 Identities=19% Similarity=0.090 Sum_probs=32.4
Q ss_pred CCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 021344 166 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 208 (314)
Q Consensus 166 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~ 208 (314)
++.+|+-+|+|. |.....+++.. +.+|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 578999999997 66665555543 3499999999988777765
No 442
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.99 E-value=2.9 Score=35.32 Aligned_cols=105 Identities=15% Similarity=0.222 Sum_probs=62.8
Q ss_pred CCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----CC----
Q 021344 167 GGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA---- 234 (314)
Q Consensus 167 ~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~~---- 234 (314)
++++|-.|++.| .++..|++.|. +|++++.++...+...+.+.... ...++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQF--EPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTS--CGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhc--CCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 568899997654 25566666676 99999999876665555443321 0246889999987632 00
Q ss_pred -CCchhhheecchhccCCCHHH-----------HHHHHHhhccc-----CcEEEEEec
Q 021344 235 -SGFVDAVHAGAALHCWPSPSN-----------AVAEISRILRS-----GGVFVGTTF 275 (314)
Q Consensus 235 -~~~fD~V~~~~vl~h~~d~~~-----------~l~~i~r~Lkp-----GG~l~i~~~ 275 (314)
-+..|+++.+.......+... ..+.+.+.++. +|.++....
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 134688887655443334432 23444555543 577766543
No 443
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=86.99 E-value=0.84 Score=40.24 Aligned_cols=66 Identities=17% Similarity=0.298 Sum_probs=50.4
Q ss_pred eEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC-CCchhhheec
Q 021344 169 LLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA-SGFVDAVHAG 244 (314)
Q Consensus 169 ~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~-~~~fD~V~~~ 244 (314)
+|||+=||.|.+..-+.+.|. .-+.++|+++.+.+..+.+. .-.++.+|+.++... -..+|+++..
T Consensus 2 kvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~---------~~~~~~~DI~~i~~~~~~~~D~l~gg 68 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNH---------SAKLIKGDISKISSDEFPKCDGIIGG 68 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHC---------CSEEEESCGGGCCGGGSCCCSEEECC
T ss_pred eEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHC---------CCCcccCChhhCCHhhCCcccEEEec
Confidence 699999999999999998885 35679999998888777652 236788998776421 1358888864
No 444
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.95 E-value=2.7 Score=36.31 Aligned_cols=79 Identities=22% Similarity=0.232 Sum_probs=51.3
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----CC---
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~~--- 234 (314)
.++++|-.|++.| .++..|++.|. +|+.++.++..++...+.+...+. ...++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGV-PAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEEecCCCCHHHHHHHHHHHH
Confidence 4677888887655 25566666676 999999998877766655544320 0117889999987632 00
Q ss_pred --CCchhhheecchh
Q 021344 235 --SGFVDAVHAGAAL 247 (314)
Q Consensus 235 --~~~fD~V~~~~vl 247 (314)
-+.+|+++.+..+
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 102 AKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 1357888876543
No 445
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=86.94 E-value=0.3 Score=31.18 Aligned_cols=34 Identities=21% Similarity=0.401 Sum_probs=23.4
Q ss_pred cCCCCeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 55 ELEGDLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 55 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
.+......||.||+.+.... ..+.+.|..|+..+
T Consensus 13 ki~~~~~fCPkCG~~~~ma~---------~~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 13 KLVRKHRFCPRCGPGVFLAE---------HADRYSCGRCGYTE 46 (55)
T ss_dssp CCCCSSCCCTTTTTTCCCEE---------CSSEEECTTTCCCE
T ss_pred EEEEccccCcCCCCceeEec---------cCCEEECCCCCCEE
Confidence 45556788999999653221 12589999997664
No 446
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.88 E-value=4.8 Score=29.79 Aligned_cols=91 Identities=10% Similarity=0.184 Sum_probs=53.3
Q ss_pred CCeEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC----CCCCchhh
Q 021344 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFVDA 240 (314)
Q Consensus 167 ~~~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----~~~~~fD~ 240 (314)
+.+|+-+|+|. |. ++..|.+.+. +|+++|.++..++..++. .++.++.+|..+.. ..-..+|+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCE
Confidence 35789999876 43 3445555554 899999998876655431 24566777765421 11235787
Q ss_pred heecchhccCCCH--HHHHHHHHhhcccCcEEEEEe
Q 021344 241 VHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 241 V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~ 274 (314)
|+..- ++. ...+..+.+.++++ .+++..
T Consensus 73 vi~~~-----~~~~~~~~~~~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 73 YIAVT-----GKEEVNLMSSLLAKSYGIN-KTIARI 102 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHTTCC-CEEEEC
T ss_pred EEEee-----CCchHHHHHHHHHHHcCCC-EEEEEe
Confidence 77642 232 23455566667775 444433
No 447
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=86.87 E-value=1.7 Score=38.71 Aligned_cols=98 Identities=10% Similarity=0.070 Sum_probs=53.6
Q ss_pred HHhccCCCCeEEEEcC-c-ccHHHHHHHHhCCCCeEEE-EeCCHH---HHHHHHHHHHhcCCCCCCCeEEEEec---CCC
Q 021344 160 EYFKSAQGGLLVDVSC-G-SGLFSRKFAKSGTYSGVVA-LDFSEN---MLRQCYDFIKQDNTILTSNLALVRAD---VCR 230 (314)
Q Consensus 160 ~~l~~~~~~~iLDiGc-G-~G~~~~~l~~~~~~~~v~g-iD~s~~---~~~~a~~~~~~~~~~~~~~v~~~~~d---~~~ 230 (314)
......++.+||-+|+ | .|.++..+++.. +.++++ ++.++. ..+.+++ .+ .. .++..+ ...
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~----lG---a~--~vi~~~~~~~~~ 230 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKS----LG---AE--HVITEEELRRPE 230 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHH----TT---CS--EEEEHHHHHSGG
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHh----cC---Cc--EEEecCcchHHH
Confidence 3345667899999997 3 488888888763 225554 444332 3444443 22 11 122211 111
Q ss_pred C-CCCC--CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 231 L-PFAS--GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 231 l-p~~~--~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
+ .... +.+|+|+-. +..+ . ..+..+.|++||++++..
T Consensus 231 ~~~~~~~~~~~Dvvid~-----~g~~-~-~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 231 MKNFFKDMPQPRLALNC-----VGGK-S-STELLRQLARGGTMVTYG 270 (357)
T ss_dssp GGGTTSSSCCCSEEEES-----SCHH-H-HHHHHTTSCTTCEEEECC
T ss_pred HHHHHhCCCCceEEEEC-----CCcH-H-HHHHHHhhCCCCEEEEEe
Confidence 1 1111 147877643 2222 2 345789999999998764
No 448
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=86.84 E-value=0.12 Score=46.93 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=31.5
Q ss_pred CCCeEEEEcCcc-cHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHH
Q 021344 166 QGGLLVDVSCGS-GLFSRKFAK-SGTYSGVVALDFSENMLRQCYD 208 (314)
Q Consensus 166 ~~~~iLDiGcG~-G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~ 208 (314)
++.+|+-+|+|. |..+..+++ .|. +|+++|.++..++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 578999999997 665554444 454 99999999987777765
No 449
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=86.51 E-value=0.18 Score=34.13 Aligned_cols=30 Identities=23% Similarity=0.704 Sum_probs=21.1
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
.-+.||.|+..-..... .+++.|..|+..+
T Consensus 26 ~ky~C~fCgk~~vkR~a---------~GIW~C~~C~~~~ 55 (73)
T 1ffk_W 26 KKYKCPVCGFPKLKRAS---------TSIWVCGHCGYKI 55 (73)
T ss_pred cCccCCCCCCceeEEEE---------eEEEECCCCCcEE
Confidence 45779999985332221 2789999998876
No 450
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.12 E-value=0.31 Score=44.31 Aligned_cols=42 Identities=21% Similarity=0.088 Sum_probs=31.5
Q ss_pred CCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 021344 166 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 208 (314)
Q Consensus 166 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~ 208 (314)
++.+|+-+|+|. |.....+++.. +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 688999999997 66666666553 2389999999876666654
No 451
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.97 E-value=1.8 Score=37.42 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=65.1
Q ss_pred CCCeEEEEcCc----ccH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C-
Q 021344 166 QGGLLVDVSCG----SGL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A- 234 (314)
Q Consensus 166 ~~~~iLDiGcG----~G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~- 234 (314)
.++++|-.|++ -|. ++..|++.|. +|+.+|.++...+...+..+.. ..+.++.+|+.+... .
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHH
Confidence 46789999975 343 5677777776 8999999876555555544433 346789999876420 0
Q ss_pred ----CCchhhheecchhccC---------CCH--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 235 ----SGFVDAVHAGAALHCW---------PSP--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 235 ----~~~fD~V~~~~vl~h~---------~d~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
-+..|+++.+..+... .+. ..+.+.+.+.++.+|.++....
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 1367888876543321 111 1345666677778888877654
No 452
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=85.85 E-value=2.3 Score=36.63 Aligned_cols=101 Identities=19% Similarity=0.193 Sum_probs=67.6
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
+++.+|--|.+.|- .+..|++.|. +|+.+|.+++.++.+.+.+ + .++..+.+|+.+..-
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~---g----~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEI---G----GGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---C----TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHc---C----CCeEEEEecCCCHHHHHHHHHHHH
Confidence 57789999988763 5677777777 9999999998877665543 2 567788899876320
Q ss_pred -CCCchhhheecchhccCCC-----H--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 234 -ASGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 -~~~~fD~V~~~~vl~h~~d-----~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.-++.|+++.+........ + -...+.+.+.|+.+|.++....
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 1245787776554332211 1 1346677788888888776543
No 453
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=85.76 E-value=5.8 Score=33.60 Aligned_cols=78 Identities=18% Similarity=0.155 Sum_probs=51.3
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C---
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A--- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~--- 234 (314)
.++++|-.|++.| .++..|++.|. +|++++.++..++...+.+...+ ...++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAG--YPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcC--CCceEEEEEecCCCHHHHHHHHHHHH
Confidence 4678998887654 24555666665 89999999887776666555443 12468888999876421 0
Q ss_pred --CCchhhheecchh
Q 021344 235 --SGFVDAVHAGAAL 247 (314)
Q Consensus 235 --~~~fD~V~~~~vl 247 (314)
-+.+|+|+....+
T Consensus 107 ~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 107 SQHSGVDICINNAGL 121 (279)
T ss_dssp HHHCCCSEEEECCCC
T ss_pred HhCCCCCEEEECCCC
Confidence 1357888875543
No 454
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=85.46 E-value=2.3 Score=36.11 Aligned_cols=104 Identities=19% Similarity=0.207 Sum_probs=65.8
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC--------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~gi-D~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-------- 233 (314)
.++++|-.|++.|- .+..|++.|. +|+.+ +-++...+...+.+...+ .++.++.+|+.+...
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAAG----GKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC----CeEEEEEcCCCCHHHHHHHHHHH
Confidence 36789999987763 5677777776 88776 445555555555555543 678899999976421
Q ss_pred --CCCchhhheecchhccCCC-----H--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 234 --ASGFVDAVHAGAALHCWPS-----P--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 --~~~~fD~V~~~~vl~h~~d-----~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.-+..|+++.+..+..... . ..+++.+.+.++++|.++....
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 0136788877654432211 1 1346677777888888877653
No 455
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=85.30 E-value=0.78 Score=33.96 Aligned_cols=42 Identities=12% Similarity=0.217 Sum_probs=27.0
Q ss_pred CCCeeeccCCCccchh-cCCCCccccccccCceecCCCCcccc
Q 021344 57 EGDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTYS 98 (314)
Q Consensus 57 ~~~~l~CP~C~~~l~~-~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (314)
......||.|+..... ...+....++.+.-.+.|.+||+.|.
T Consensus 69 p~~~~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w~ 111 (113)
T 3h0g_I 69 PRSDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFE 111 (113)
T ss_dssp CBCCSCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCCC
T ss_pred CCcccCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEEe
Confidence 3344889999986321 11122244556667899999998873
No 456
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=85.24 E-value=2.9 Score=37.64 Aligned_cols=101 Identities=8% Similarity=0.022 Sum_probs=65.1
Q ss_pred CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecc
Q 021344 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (314)
Q Consensus 166 ~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~ 245 (314)
.+++||.|+-+.|.++..++... ++.+.-|--..+..+.++...++ ...++.+... ...+ .+.||+|+...
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~~~-~~~~~~~~~~-~~~~---~~~~~~v~~~l 108 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLNGI-DESSVKFLDS-TADY---PQQPGVVLIKV 108 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHTTC-CGGGSEEEET-TSCC---CSSCSEEEEEC
T ss_pred CCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHcCC-CccceEeccc-cccc---ccCCCEEEEEc
Confidence 45689999999999998887653 34454366566666677777653 1123555432 2222 35699888643
Q ss_pred hhccCCCHHHHHHHHHhhcccCcEEEEEecc
Q 021344 246 ALHCWPSPSNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 246 vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
. .+.......|..+...|++|+.+++..-.
T Consensus 109 p-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 109 P-KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp C-SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred C-CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 2 11222345688899999999999877643
No 457
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=85.12 E-value=2.9 Score=35.51 Aligned_cols=78 Identities=21% Similarity=0.291 Sum_probs=53.9
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHHhcCCCCCCCeEEEEecCCC
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFS------------ENMLRQCYDFIKQDNTILTSNLALVRADVCR 230 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s------------~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 230 (314)
.++++|-.|++.| .++..|++.|. +|+.+|.+ ...++...+.+...+ .++.++.+|+.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG----SRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT----CCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhcC----CeEEEEeCCCCC
Confidence 4678999998765 25667777776 89999986 666666666555544 689999999976
Q ss_pred CC-----CC-----CCchhhheecchhcc
Q 021344 231 LP-----FA-----SGFVDAVHAGAALHC 249 (314)
Q Consensus 231 lp-----~~-----~~~fD~V~~~~vl~h 249 (314)
.. +. -+..|+++.+..+..
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 42 10 136788887655443
No 458
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=84.97 E-value=0.45 Score=42.10 Aligned_cols=57 Identities=18% Similarity=0.121 Sum_probs=39.2
Q ss_pred CCeEEEEecCCC-CC-CCCCchhhheecchhc--------------cCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 219 SNLALVRADVCR-LP-FASGFVDAVHAGAALH--------------CWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 219 ~~v~~~~~d~~~-lp-~~~~~fD~V~~~~vl~--------------h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
....++++|..+ +. +++++||+|++.=-.. ++......++++.++|||||.+++..-
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 467788888753 32 4567899988752211 111245788999999999999998763
No 459
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=84.81 E-value=0.27 Score=45.00 Aligned_cols=42 Identities=21% Similarity=0.112 Sum_probs=31.6
Q ss_pred CCCeEEEEcCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 021344 166 QGGLLVDVSCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYD 208 (314)
Q Consensus 166 ~~~~iLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~ 208 (314)
++.+|+-+|+|. |..+..+++.. +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 578999999997 66666665543 2489999999887776644
No 460
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.76 E-value=1.2 Score=39.52 Aligned_cols=89 Identities=7% Similarity=-0.046 Sum_probs=54.2
Q ss_pred CeEEEE-cCcc-cHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCC--------CCc
Q 021344 168 GLLVDV-SCGS-GLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFA--------SGF 237 (314)
Q Consensus 168 ~~iLDi-GcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~--------~~~ 237 (314)
.+||-. |+|. |..+..+++.. ..+|+++|.++..++.+++. + .. ..+ |..+..+. ...
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~----G----a~-~~~--~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDI----G----AA-HVL--NEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHH----T----CS-EEE--ETTSTTHHHHHHHHHHHHC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----CC-EEE--ECCcHHHHHHHHHHhcCCC
Confidence 466654 4443 77777776653 23999999999888888752 1 11 122 22221111 125
Q ss_pred hhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEec
Q 021344 238 VDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 238 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
+|+|+-.-. ...+....+.|++||++++...
T Consensus 234 ~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 234 PRIFLDAVT-------GPLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp CCEEEESSC-------HHHHHHHHHHSCTTCEEEECCC
T ss_pred CcEEEECCC-------ChhHHHHHhhhcCCCEEEEEec
Confidence 887775432 1234778899999999998763
No 461
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=84.61 E-value=0.39 Score=33.11 Aligned_cols=12 Identities=42% Similarity=1.129 Sum_probs=8.5
Q ss_pred eeccCCCccchh
Q 021344 61 FSCPICYEPLIR 72 (314)
Q Consensus 61 l~CP~C~~~l~~ 72 (314)
..||.|++++..
T Consensus 3 ~~CP~C~~~l~~ 14 (81)
T 2jrp_A 3 ITCPVCHHALER 14 (81)
T ss_dssp CCCSSSCSCCEE
T ss_pred CCCCCCCCcccc
Confidence 468888887755
No 462
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=84.15 E-value=0.94 Score=42.47 Aligned_cols=72 Identities=18% Similarity=0.220 Sum_probs=50.7
Q ss_pred HHHHHHHHhccC------CCCeEEEEcCcccHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEec
Q 021344 154 EFKMAQEYFKSA------QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRAD 227 (314)
Q Consensus 154 ~~~~l~~~l~~~------~~~~iLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d 227 (314)
....+..+++.. ..-+++|+=||.|.+..-+...|. .-+.++|+++.+.+..+.+.... ....++.+|
T Consensus 69 ~~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~~-----p~~~~~~~D 142 (482)
T 3me5_A 69 EFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYCD-----PATHHFNED 142 (482)
T ss_dssp HHHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCCC-----TTTCEEESC
T ss_pred HHHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhcccC-----CCcceeccc
Confidence 345555555542 235799999999999999998875 34889999999888777654211 234567788
Q ss_pred CCCC
Q 021344 228 VCRL 231 (314)
Q Consensus 228 ~~~l 231 (314)
+.++
T Consensus 143 I~~i 146 (482)
T 3me5_A 143 IRDI 146 (482)
T ss_dssp THHH
T ss_pred hhhh
Confidence 7654
No 463
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=84.14 E-value=3.9 Score=33.59 Aligned_cols=76 Identities=18% Similarity=0.130 Sum_probs=47.9
Q ss_pred CCCeEEEEcCcc--cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCe-EEEEecCC-CCCCCCCchhh
Q 021344 166 QGGLLVDVSCGS--GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNL-ALVRADVC-RLPFASGFVDA 240 (314)
Q Consensus 166 ~~~~iLDiGcG~--G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v-~~~~~d~~-~lp~~~~~fD~ 240 (314)
.+++||-.|+.. |. ++..|++.+. +|++++-++...+.... .++ .++.+|+. .+.-.-+.+|+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D~ 87 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH--EPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASIDA 87 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCSE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCCE
Confidence 467899998643 32 4555566665 99999998876554433 467 89999986 22111236898
Q ss_pred heecchhccCCCH
Q 021344 241 VHAGAALHCWPSP 253 (314)
Q Consensus 241 V~~~~vl~h~~d~ 253 (314)
|+.........++
T Consensus 88 vi~~ag~~~~~~~ 100 (236)
T 3e8x_A 88 VVFAAGSGPHTGA 100 (236)
T ss_dssp EEECCCCCTTSCH
T ss_pred EEECCCCCCCCCc
Confidence 8876654443343
No 464
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=83.90 E-value=4.6 Score=34.39 Aligned_cols=104 Identities=20% Similarity=0.309 Sum_probs=62.3
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----CC--
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSEN-MLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~-~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~~-- 234 (314)
.++++|-.|++.|- .+..|++.|. +|+.++.+.. ..+...+.+...+ .++.++.+|+.+.. +.
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKNG----SDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHhC----CCeEEEEcCCCCHHHHHHHHHHH
Confidence 35678888876652 4555666666 8999988753 3344434444333 57888999987632 00
Q ss_pred ---CCchhhheecchhccCC-----CHH--------------HHHHHHHhhcccCcEEEEEec
Q 021344 235 ---SGFVDAVHAGAALHCWP-----SPS--------------NAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 235 ---~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~i~r~LkpGG~l~i~~~ 275 (314)
-+..|+++.+..+.... +++ .+++.+.+.|+.+|.++....
T Consensus 102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 13578888765543221 111 245666677777788776653
No 465
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.80 E-value=6.9 Score=32.39 Aligned_cols=74 Identities=18% Similarity=0.254 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----C-CC
Q 021344 165 AQGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F-AS 235 (314)
Q Consensus 165 ~~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~-~~ 235 (314)
.++++||-.|++.|- ++..|++.|. +|+.++.++..++...+.+. .++.+..+|+.+.. + .-
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNALK-------DNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-------SSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhc-------cCccEEEcCCCCHHHHHHHHHhc
Confidence 357789988877652 5566666776 99999999887776655432 57888999987632 1 12
Q ss_pred Cchhhheecchh
Q 021344 236 GFVDAVHAGAAL 247 (314)
Q Consensus 236 ~~fD~V~~~~vl 247 (314)
+..|+++.+..+
T Consensus 83 ~~id~li~~Ag~ 94 (249)
T 3f9i_A 83 SNLDILVCNAGI 94 (249)
T ss_dssp SCCSEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 368888876553
No 466
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=83.75 E-value=3.9 Score=34.35 Aligned_cols=73 Identities=25% Similarity=0.279 Sum_probs=50.3
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
.++++|-.|++.| .++..|++.|. +|+.+|.++...+...+.+ ..++.++.+|+.+...
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEI-------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 4678999997765 25666777776 9999999987766655543 2568899999976320
Q ss_pred -CCCchhhheecchh
Q 021344 234 -ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 -~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 78 ~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 78 EHAGGLDILVNNAAL 92 (259)
T ss_dssp HHSSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 11368888876554
No 467
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=83.71 E-value=5.3 Score=33.25 Aligned_cols=76 Identities=21% Similarity=0.268 Sum_probs=55.0
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
.++++|-.|++.| .++..|++.|. +|+.+|.++..++...+.+...+ .++.++.+|+.+...
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVADG----GTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 4678999998765 25667777776 89999999988888777776644 678999999976420
Q ss_pred -CCCchhhheecchh
Q 021344 234 -ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 -~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 82 ~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 01357888876543
No 468
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.67 E-value=6.4 Score=33.13 Aligned_cols=75 Identities=21% Similarity=0.225 Sum_probs=55.5
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
.++++|-.|++.|- .+..|++.|. +|+.+|.++..++...+.+...+ .++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDTG----RRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46789999987763 5677777776 89999999988887777776654 689999999976420
Q ss_pred -CCCchhhheecch
Q 021344 234 -ASGFVDAVHAGAA 246 (314)
Q Consensus 234 -~~~~fD~V~~~~v 246 (314)
.-+..|+++.+..
T Consensus 84 ~~~g~id~lv~nAg 97 (264)
T 3ucx_A 84 KAYGRVDVVINNAF 97 (264)
T ss_dssp HHTSCCSEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 1136788887653
No 469
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=83.54 E-value=4.4 Score=33.82 Aligned_cols=76 Identities=22% Similarity=0.247 Sum_probs=48.7
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----CC--
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDF-SENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA-- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~~-- 234 (314)
.+++||-.|++.| .++..|++.+. +|+.++- ++...+...+.+...+ .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 79 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKVG----GEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT----CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhcC----CceEEEECCCCCHHHHHHHHHHH
Confidence 3567888886654 24555666665 8999998 7766665555554433 57888999987632 10
Q ss_pred ---CCchhhheecchh
Q 021344 235 ---SGFVDAVHAGAAL 247 (314)
Q Consensus 235 ---~~~fD~V~~~~vl 247 (314)
-+.+|+|+....+
T Consensus 80 ~~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 80 IKEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 1257888765543
No 470
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.12 E-value=6 Score=34.14 Aligned_cols=77 Identities=26% Similarity=0.270 Sum_probs=56.4
Q ss_pred CCCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C--
Q 021344 165 AQGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A-- 234 (314)
Q Consensus 165 ~~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~-- 234 (314)
-.++++|-.|++.| .++..|++.|. +|+.++.++..++.+.+.+...+ .++.++.+|+.+... .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQG----FDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC----CceEEEEccCCCHHHHHHHHHHH
Confidence 35778999998875 25666777776 99999999988888877776654 689999999977421 0
Q ss_pred ---CCchhhheecchh
Q 021344 235 ---SGFVDAVHAGAAL 247 (314)
Q Consensus 235 ---~~~fD~V~~~~vl 247 (314)
-+..|+++.+..+
T Consensus 103 ~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHhCCCCCEEEECCCc
Confidence 1367888876554
No 471
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=83.08 E-value=3.9 Score=34.53 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=63.7
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCC---HHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFS---ENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------ 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s---~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~------ 233 (314)
.++++|-.|++.|- .+..|++.|. +|+.++.+ ...++...+.+...+ .++.++.+|+.+...
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQG----AKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTTT----CEEEEEECCCCSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHH
Confidence 46789999987653 4555566665 89888654 445555555554433 678999999976420
Q ss_pred ----CCCchhhheecchhccCC-----CH--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 234 ----ASGFVDAVHAGAALHCWP-----SP--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ----~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.-+..|+++.+..+.... ++ ..+.+.+.+.|+++|.++....
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 013678887755433221 11 1345566667777888877653
No 472
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=82.31 E-value=3.9 Score=34.33 Aligned_cols=104 Identities=7% Similarity=0.058 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCc--c--cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC------
Q 021344 165 AQGGLLVDVSCG--S--GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF------ 233 (314)
Q Consensus 165 ~~~~~iLDiGcG--~--G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~------ 233 (314)
.++++||-.|++ . |. ++..|++.|. +|+.++.+....+.+++..+.. .++.++.+|+.+...
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHHHHHHHH
Confidence 357899999965 3 32 5566677776 9999988865445444443332 357889999876320
Q ss_pred ----CCCchhhheecchhccC----------CCH--------------HHHHHHHHhhcccCcEEEEEec
Q 021344 234 ----ASGFVDAVHAGAALHCW----------PSP--------------SNAVAEISRILRSGGVFVGTTF 275 (314)
Q Consensus 234 ----~~~~fD~V~~~~vl~h~----------~d~--------------~~~l~~i~r~LkpGG~l~i~~~ 275 (314)
.-+..|+++.+..+... .+. ..+++.+.+.++++|.++....
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 11367888876544321 111 1345666677777888776553
No 473
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.18 E-value=1.8 Score=33.38 Aligned_cols=94 Identities=18% Similarity=0.164 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCcc-cHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC----CCCCch
Q 021344 165 AQGGLLVDVSCGS-GLF-SRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP----FASGFV 238 (314)
Q Consensus 165 ~~~~~iLDiGcG~-G~~-~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp----~~~~~f 238 (314)
.++.+|+-+|+|. |.. +..|.+.+. +|+++|.++..++.+++ ..++..+.+|..+.. ..-..+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~--~V~vid~~~~~~~~~~~---------~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH--SVVVVDKNEYAFHRLNS---------EFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGGGGSCT---------TCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHh---------cCCCcEEEecCCCHHHHHHcCcccC
Confidence 3567899999987 543 444455554 99999998865544321 134556667754321 011346
Q ss_pred hhheecchhccCCCHH--HHHHHHHhhcccCcEEEEEe
Q 021344 239 DAVHAGAALHCWPSPS--NAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 239 D~V~~~~vl~h~~d~~--~~l~~i~r~LkpGG~l~i~~ 274 (314)
|+|+..- +++. ..+..+.+.+.+...++...
T Consensus 86 d~Vi~~~-----~~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 86 DMVFAFT-----NDDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp SEEEECS-----SCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred CEEEEEe-----CCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 7766532 3332 33344445455555666555
No 474
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=82.14 E-value=5 Score=34.49 Aligned_cols=92 Identities=12% Similarity=0.054 Sum_probs=53.9
Q ss_pred CeEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEE------ecCC--CC-CCCC-
Q 021344 168 GLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR------ADVC--RL-PFAS- 235 (314)
Q Consensus 168 ~~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~------~d~~--~l-p~~~- 235 (314)
.+|.-||+|. |. ++..+.+.+. +|+.+|.++..++..++. .+.... ..+. .. ....
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN--DVTLIDQWPAHIEAIRKN----------GLIADFNGEEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHH----------CEEEEETTEEEEECCCEECGGGCCTT
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC--cEEEEECCHHHHHHHHhC----------CEEEEeCCCeeEecceeecchhhccc
Confidence 4789999987 43 5566666665 999999999877766552 122111 0110 10 0111
Q ss_pred -CchhhheecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 236 -GFVDAVHAGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 236 -~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
..+|+|+..---. ....+++++...++++..++...
T Consensus 72 ~~~~d~vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 72 NEQVDLIIALTKAQ---QLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp SCCCSEEEECSCHH---HHHHHHHHHGGGCCTTCEEEECC
T ss_pred CCCCCEEEEEeccc---cHHHHHHHHHHhcCCCCEEEEec
Confidence 1578877643211 13566778888888877665543
No 475
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=82.06 E-value=6.2 Score=33.71 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=51.2
Q ss_pred CeEEEEcC-cc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 168 GLLVDVSC-GS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 168 ~~iLDiGc-G~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
.+|.=||+ |. |. ++..+.+.+. +|+++|.++..++.+.+ .+ +.. .+..+ .-...|+|+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~----~g------~~~--~~~~~---~~~~aDvVi~a 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH--HLAAIEIAPEGRDRLQG----MG------IPL--TDGDG---WIDEADVVVLA 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS--EEEEECCSHHHHHHHHH----TT------CCC--CCSSG---GGGTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHh----cC------CCc--CCHHH---HhcCCCEEEEc
Confidence 47999999 86 44 5666666665 89999999887766654 11 111 12111 11247887764
Q ss_pred chhccCCCHHHHHHHHHhhcccCcEEEE
Q 021344 245 AALHCWPSPSNAVAEISRILRSGGVFVG 272 (314)
Q Consensus 245 ~vl~h~~d~~~~l~~i~r~LkpGG~l~i 272 (314)
---.. ...+++++...+++|..++-
T Consensus 75 v~~~~---~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 75 LPDNI---IEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp SCHHH---HHHHHHHHGGGSCTTCEEEE
T ss_pred CCchH---HHHHHHHHHHhCCCCCEEEE
Confidence 32111 24566777777777765543
No 476
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.85 E-value=4.6 Score=34.28 Aligned_cols=85 Identities=8% Similarity=0.104 Sum_probs=51.0
Q ss_pred eEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecch
Q 021344 169 LLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAA 246 (314)
Q Consensus 169 ~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~v 246 (314)
+|.=||+|. |. ++..+.+.+. +|+++|.++..++.+.+ .+ .... ...|..+. ...|+|+..--
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~~~----~g----~~~~-~~~~~~~~----~~~D~vi~av~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAVE----RQ----LVDE-AGQDLSLL----QTAKIIFLCTP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH----TT----SCSE-EESCGGGG----TTCSEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHh----CC----CCcc-ccCCHHHh----CCCCEEEEECC
Confidence 577899987 44 5556666665 89999999987766543 12 1111 12232222 35788876432
Q ss_pred hccCCCHHHHHHHHHhhcccCcEEE
Q 021344 247 LHCWPSPSNAVAEISRILRSGGVFV 271 (314)
Q Consensus 247 l~h~~d~~~~l~~i~r~LkpGG~l~ 271 (314)
-. ....+++++...+++|..++
T Consensus 67 ~~---~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 IQ---LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HH---HHHHHHHHHGGGSCTTCEEE
T ss_pred HH---HHHHHHHHHHhhCCCCCEEE
Confidence 11 12456777777888877554
No 477
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.78 E-value=6.7 Score=32.86 Aligned_cols=76 Identities=17% Similarity=0.226 Sum_probs=55.1
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C---
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A--- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~--- 234 (314)
.++++|-.|++.|- .+..|++.|. +|+.+|.++...+...+.+...+ .++.++.+|+.+... .
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQAG----GKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHHH
Confidence 46788988887653 5667777776 89999999988877777666644 689999999976421 0
Q ss_pred --CCchhhheecchh
Q 021344 235 --SGFVDAVHAGAAL 247 (314)
Q Consensus 235 --~~~fD~V~~~~vl 247 (314)
-+..|+++.+..+
T Consensus 85 ~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 85 DQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1367888876554
No 478
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=81.67 E-value=1.6 Score=30.38 Aligned_cols=29 Identities=21% Similarity=0.532 Sum_probs=19.6
Q ss_pred eeccCCCccchhcCCCCccccccccCceecCCCCcccc
Q 021344 61 FSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYS 98 (314)
Q Consensus 61 l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~ 98 (314)
.-||.|+..+..... ...+.|+.|++.|=
T Consensus 26 ~wCP~C~~~~~~~~~---------~~~v~C~~C~~~FC 54 (86)
T 2ct7_A 26 LWCAQCSFGFIYERE---------QLEATCPQCHQTFC 54 (86)
T ss_dssp ECCSSSCCCEECCCS---------CSCEECTTTCCEEC
T ss_pred eECcCCCchheecCC---------CCceEeCCCCCccc
Confidence 349999987754321 13578999988773
No 479
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=81.53 E-value=4 Score=34.23 Aligned_cols=76 Identities=13% Similarity=0.091 Sum_probs=55.0
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C---
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A--- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~--- 234 (314)
.++++|-.|++.|- ++..|++.|. +|+.+|.++..++...+.++..+ .++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAAG----GRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CeEEEEECcCCCHHHHHHHHHHHH
Confidence 46789999988763 5666777776 99999999887777777666654 689999999976420 0
Q ss_pred -CCchhhheecchh
Q 021344 235 -SGFVDAVHAGAAL 247 (314)
Q Consensus 235 -~~~fD~V~~~~vl 247 (314)
.+..|+++.+..+
T Consensus 80 ~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 80 AHAPLEVTIFNVGA 93 (252)
T ss_dssp HHSCEEEEEECCCC
T ss_pred hhCCceEEEECCCc
Confidence 1467888876554
No 480
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=81.10 E-value=6.1 Score=33.73 Aligned_cols=76 Identities=16% Similarity=0.147 Sum_probs=50.1
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHHH-hcCCCCCCCeEEEEecCCC----CC----
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSE-NMLRQCYDFIK-QDNTILTSNLALVRADVCR----LP---- 232 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~-~~~~~a~~~~~-~~~~~~~~~v~~~~~d~~~----lp---- 232 (314)
.++++|-.|++.| .++..|++.|. +|+.++.++ ..++...+.+. ..+ .++.++.+|+.+ ..
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~~~~~~~~v~~ 95 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKERS----NTAVVCQADLTNSNVLPASCEE 95 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSCSTTHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhhcC----CceEEEEeecCCccCCHHHHHH
Confidence 3668888887765 25666677776 899999886 65555555443 222 578899999987 21
Q ss_pred -C-----CCCchhhheecchh
Q 021344 233 -F-----ASGFVDAVHAGAAL 247 (314)
Q Consensus 233 -~-----~~~~fD~V~~~~vl 247 (314)
+ .-+..|+++.+..+
T Consensus 96 ~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 96 IINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 0 01357888876543
No 481
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=81.05 E-value=0.2 Score=34.47 Aligned_cols=36 Identities=19% Similarity=0.615 Sum_probs=20.2
Q ss_pred eeccCCCcc-chhc------CCCCcccccccc-CceecCCCCccc
Q 021344 61 FSCPICYEP-LIRK------GPTGLTLGAIYR-SGFKCRKCDKTY 97 (314)
Q Consensus 61 l~CP~C~~~-l~~~------~~~~~~~~~i~~-~~l~C~~C~~~~ 97 (314)
..||+|++. +... ...+. ...+.. ....|++||..|
T Consensus 3 m~Cp~Cg~~~l~~~~~~~~~~~~G~-~~~I~~Vp~~~C~~CGE~~ 46 (78)
T 3ga8_A 3 MKCPVCHQGEMVSGIKDIPYTFRGR-KTVLKGIHGLYCVHCEESI 46 (78)
T ss_dssp CBCTTTSSSBEEEEEEEEEEEETTE-EEEEEEEEEEEETTTCCEE
T ss_pred eECCCCCCCeeEeEEEEEEEEECCE-EEEEcCceeEECCCCCCEE
Confidence 579999975 3211 01111 112222 578999998776
No 482
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.80 E-value=6.4 Score=33.03 Aligned_cols=76 Identities=21% Similarity=0.203 Sum_probs=54.2
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
.++++|-.|++.| .++..|++.|. +|+.++.++..++...+.+...+ .++.++.+|+.+...
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVAAG----GEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhC----CceeEEEecCCCHHHHHHHHHHHH
Confidence 4678998887664 24566666676 89999999988887777776644 678999999976421
Q ss_pred -CCCchhhheecchh
Q 021344 234 -ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 -~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 102 ~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 01357888876554
No 483
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=80.64 E-value=7.9 Score=32.89 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=53.7
Q ss_pred CCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC----------
Q 021344 167 GGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---------- 233 (314)
Q Consensus 167 ~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~---------- 233 (314)
++++|-.|++.|- ++..|++.|. +|+.++.++..++...+.+...+ .++.++.+|+.+...
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLRAAG----HDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT----CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 6789999987652 5666777776 89999999988887777766544 679999999976420
Q ss_pred CCCchhhheecchh
Q 021344 234 ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 ~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 98 ~~g~id~lv~nAg~ 111 (279)
T 3sju_A 98 RFGPIGILVNSAGR 111 (279)
T ss_dssp HHCSCCEEEECCCC
T ss_pred HcCCCcEEEECCCC
Confidence 01357888776544
No 484
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=80.52 E-value=7.6 Score=32.10 Aligned_cols=76 Identities=12% Similarity=0.124 Sum_probs=54.4
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
.++++|-.|++.| .++..|++.|. +|+.++.++...+...+.++..+ .++.++.+|+.+...
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEKG----FKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHH
Confidence 3568888887665 25666777776 99999999988887777776654 689999999976320
Q ss_pred -CCCchhhheecchh
Q 021344 234 -ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 -~~~~fD~V~~~~vl 247 (314)
..+..|+++.+..+
T Consensus 78 ~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 78 AENLAIDILVNNAGI 92 (247)
T ss_dssp HTTCCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 12357888876543
No 485
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=80.31 E-value=8.9 Score=35.52 Aligned_cols=95 Identities=19% Similarity=0.227 Sum_probs=57.1
Q ss_pred CCeEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh-------cC----CC-CCCCeEEEEecCCCCC
Q 021344 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQ-------DN----TI-LTSNLALVRADVCRLP 232 (314)
Q Consensus 167 ~~~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-------~~----~~-~~~~v~~~~~d~~~lp 232 (314)
-.+|.-||+|. |. ++..++..|. +|+++|.++..++.+++.+.. .+ .. ......+ ..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE-- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH--
Confidence 35799999998 44 5666677665 999999999988877653321 00 00 0011222 333211
Q ss_pred CCCCchhhheecchhccCCCH---HHHHHHHHhhcccCcEEEE
Q 021344 233 FASGFVDAVHAGAALHCWPSP---SNAVAEISRILRSGGVFVG 272 (314)
Q Consensus 233 ~~~~~fD~V~~~~vl~h~~d~---~~~l~~i~r~LkpGG~l~i 272 (314)
-...|+|+..-. .+. ..+++++...++||.+++.
T Consensus 112 --~~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 --LSTVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --GTTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --HCCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 124677665321 232 4678888889988877654
No 486
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=80.15 E-value=6 Score=33.13 Aligned_cols=75 Identities=24% Similarity=0.255 Sum_probs=53.4
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC---------
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF--------- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~--------- 233 (314)
.++++|-.|++.|- ++..|++.|. +|+.+|.++..++.+.+.+...+ .++.++.+|+.+...
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA--RVVITGRTKEKLEEAKLEIEQFP----GQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCST----TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 35688888876652 5666677776 89999999988888777665543 679999999976320
Q ss_pred -CCCchhhheecch
Q 021344 234 -ASGFVDAVHAGAA 246 (314)
Q Consensus 234 -~~~~fD~V~~~~v 246 (314)
.-+..|+++.+..
T Consensus 79 ~~~g~id~lv~nAg 92 (257)
T 3imf_A 79 EKFGRIDILINNAA 92 (257)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0135788876554
No 487
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.12 E-value=6.7 Score=33.48 Aligned_cols=89 Identities=9% Similarity=0.128 Sum_probs=52.6
Q ss_pred CeEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheecc
Q 021344 168 GLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245 (314)
Q Consensus 168 ~~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~~ 245 (314)
.+|.=||+|. |. ++..+.+.+...+|+++|.++..++.+++ .+ . ......|..+. -...|+|+..-
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g----~-~~~~~~~~~~~---~~~aDvVilav 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RG----I-VDEATADFKVF---AALADVIILAV 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TT----S-CSEEESCTTTT---GGGCSEEEECS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cC----C-cccccCCHHHh---hcCCCEEEEcC
Confidence 4789999997 43 55666666534589999999887776654 12 1 10122233221 12468777643
Q ss_pred hhccCCCHHHHHHHHHhh-cccCcEEE
Q 021344 246 ALHCWPSPSNAVAEISRI-LRSGGVFV 271 (314)
Q Consensus 246 vl~h~~d~~~~l~~i~r~-LkpGG~l~ 271 (314)
--.. ...+++++... +++|.+++
T Consensus 75 p~~~---~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 75 PIKK---TIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CHHH---HHHHHHHHHTSCCCTTCEEE
T ss_pred CHHH---HHHHHHHHHhcCCCCCCEEE
Confidence 2111 14567777777 88776554
No 488
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=80.04 E-value=1.1 Score=29.32 Aligned_cols=29 Identities=17% Similarity=0.518 Sum_probs=22.4
Q ss_pred CeeeccCCCccchhcCCCCccccccccCceecCCCCccc
Q 021344 59 DLFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 59 ~~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
-.+.|..|+....... ...++|+.||+..
T Consensus 20 v~Y~C~~Cg~~~~l~~----------~~~iRC~~CG~RI 48 (63)
T 3h0g_L 20 MIYLCADCGARNTIQA----------KEVIRCRECGHRV 48 (63)
T ss_dssp CCCBCSSSCCBCCCCS----------SSCCCCSSSCCCC
T ss_pred eEEECCCCCCeeecCC----------CCceECCCCCcEE
Confidence 5689999999875432 2579999998765
No 489
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=79.81 E-value=7.1 Score=33.03 Aligned_cols=75 Identities=12% Similarity=0.155 Sum_probs=53.6
Q ss_pred CCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC----------
Q 021344 167 GGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF---------- 233 (314)
Q Consensus 167 ~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~---------- 233 (314)
++++|-.|++.|- ++..|++.|. +|+.++.++..++...+.++..+ .++.++.+|+.+...
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGA--KILLGARRQARIEAIATEIRDAG----GTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5678888877652 5666677776 89999999988888777776654 678889999876320
Q ss_pred CCCchhhheecchh
Q 021344 234 ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 ~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 78 ~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 78 TWGRIDVLVNNAGV 91 (264)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 01357888876544
No 490
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=79.72 E-value=1.1 Score=33.08 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=26.4
Q ss_pred eeeccCCCccchhcCCCCccccccccCceecCCCCccccCccc
Q 021344 60 LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDN 102 (314)
Q Consensus 60 ~l~CP~C~~~l~~~~~~~~~~~~i~~~~l~C~~C~~~~~~~~g 102 (314)
+.=||.|++-|......+ -....+.|.+|+..+.+.+.
T Consensus 4 m~FCp~Cgn~L~~~~~~~-----~~~~~~~C~~C~y~~~~~~~ 41 (113)
T 3h0g_I 4 FQYCIECNNMLYPREDKV-----DRVLRLACRNCDYSEIAATS 41 (113)
T ss_dssp CCCCSSSCCCCEECCCTT-----TCCCCEECSSSCCEECCSCS
T ss_pred ceeCcCCCCEeeEcccCC-----CCeeEEECCCCCCeEEcCCC
Confidence 455999999887654211 01247999999998877654
No 491
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=79.71 E-value=0.59 Score=41.16 Aligned_cols=40 Identities=18% Similarity=0.361 Sum_probs=26.2
Q ss_pred CCeeeccCCCccchh-cCCCCccccccccCceecCCCCccc
Q 021344 58 GDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTY 97 (314)
Q Consensus 58 ~~~l~CP~C~~~l~~-~~~~~~~~~~i~~~~l~C~~C~~~~ 97 (314)
.+.+.||.|+..-.. ...+....++.+.-.+.|.+||+.|
T Consensus 266 ~~~~~C~~C~~~~~~~~q~Q~rsaDe~~t~f~~C~~Cg~~w 306 (309)
T 1pqv_S 266 TDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306 (309)
T ss_pred cccccCCCCCCCeeEEEEeecccCCCCCcEEEEeCCCCCce
Confidence 457899999985321 1111223445556789999999986
No 492
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=79.65 E-value=3.8 Score=35.39 Aligned_cols=90 Identities=12% Similarity=0.119 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCcc-cHHHHH-HHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhhe
Q 021344 165 AQGGLLVDVSCGS-GLFSRK-FAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVH 242 (314)
Q Consensus 165 ~~~~~iLDiGcG~-G~~~~~-l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~ 242 (314)
-.+.+|+=||+|. |..... +...|. +|+++|.++...+.+.+ ..+..+. ...+.-.-...|+|+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~dr~~~~~~~~~~----------~g~~~~~--~~~l~~~l~~aDvVi 218 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGA--KVKVGARESDLLARIAE----------MGMEPFH--ISKAAQELRDVDVCI 218 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH----------TTSEEEE--GGGHHHHTTTCSEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHH----------CCCeecC--hhhHHHHhcCCCEEE
Confidence 3678999999987 554433 333444 99999999876554432 1223221 111110113578887
Q ss_pred ecchhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 243 AGAALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 243 ~~~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
..-.. ++-+. +..+.+|||++++-..
T Consensus 219 ~~~p~-~~i~~-----~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 219 NTIPA-LVVTA-----NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp ECCSS-CCBCH-----HHHHHSCTTCEEEECS
T ss_pred ECCCh-HHhCH-----HHHHhcCCCCEEEEec
Confidence 65433 22222 2345689998776544
No 493
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=79.60 E-value=26 Score=30.86 Aligned_cols=118 Identities=13% Similarity=0.182 Sum_probs=71.0
Q ss_pred HHHHHhccC-CCCeEEEEcCcccHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHhcC--------------------
Q 021344 157 MAQEYFKSA-QGGLLVDVSCGSGLFSRKFAKSG-TYSGVVALDFSENMLRQCYDFIKQDN-------------------- 214 (314)
Q Consensus 157 ~l~~~l~~~-~~~~iLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~-------------------- 214 (314)
.+.+++... +...|+-+|||.=.....+...+ ....++=+|. |+.++.=++.+...+
T Consensus 80 ~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~ 158 (334)
T 3iei_A 80 LIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGH 158 (334)
T ss_dssp HHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTT
T ss_pred HHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccc
Confidence 344444432 45789999999866665665542 3457888887 555544333333210
Q ss_pred CCCCCCeEEEEecCCCCC----------CCCCchhhheecchhccCCCH--HHHHHHHHhhcccCcEEEEEecc
Q 021344 215 TILTSNLALVRADVCRLP----------FASGFVDAVHAGAALHCWPSP--SNAVAEISRILRSGGVFVGTTFL 276 (314)
Q Consensus 215 ~~~~~~v~~~~~d~~~lp----------~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpGG~l~i~~~~ 276 (314)
.....+..++.+|+.+.. +..+.--++++-.++.+++.. ..+++.+.+.. |+|.+++.+..
T Consensus 159 ~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i 231 (334)
T 3iei_A 159 ILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQV 231 (334)
T ss_dssp EEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred cCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEecc
Confidence 001367899999997631 222334467777888888643 46788777765 45665555544
No 494
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=79.54 E-value=9.3 Score=32.59 Aligned_cols=76 Identities=24% Similarity=0.241 Sum_probs=54.5
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----C----
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F---- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~---- 233 (314)
.++++|-.|++.|- .+..|++.|. +|+.+|.++..++...+.+...+ .++.++.+|+.+.. +
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV--TVGALGRTRTEVEEVADEIVGAG----GQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHTTTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 46789999987653 5566777776 99999999988877777665543 67899999997632 0
Q ss_pred -CCCchhhheecchh
Q 021344 234 -ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 -~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 101 ~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 101 LKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCCCEEEECCCC
Confidence 01368888876554
No 495
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=79.47 E-value=10 Score=31.41 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=50.7
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----CC---
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----FA--- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~~--- 234 (314)
.+++||-.|++.|- ++..|++.+. +|+++|.++...+...+.++..+ .++.++.+|+.+.. +.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA--RVIIADLDEAMATKAVEDLRMEG----HDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHH
Confidence 36789988876542 4555666665 99999999877666655555433 57899999997632 10
Q ss_pred --CCchhhheecchh
Q 021344 235 --SGFVDAVHAGAAL 247 (314)
Q Consensus 235 --~~~fD~V~~~~vl 247 (314)
-+.+|+|+....+
T Consensus 86 ~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 86 EQEGRVDILVACAGI 100 (260)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1357888865543
No 496
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=79.33 E-value=10 Score=31.95 Aligned_cols=76 Identities=18% Similarity=0.209 Sum_probs=51.9
Q ss_pred CCCeEEEEcCcccH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCC-----C----
Q 021344 166 QGGLLVDVSCGSGL---FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLP-----F---- 233 (314)
Q Consensus 166 ~~~~iLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp-----~---- 233 (314)
.++++|-.|++.|- ++..|++.|. +|+++|.++..++...+.++..+ .++.++.+|+.+.. +
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGLG----AKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEEcCHHHHHHHHHHHHhcC----CeEEEEEeeCCCHHHHHHHHHHHH
Confidence 46789988876542 4555666665 89999999887776666665543 57899999987632 0
Q ss_pred -CCCchhhheecchh
Q 021344 234 -ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 -~~~~fD~V~~~~vl 247 (314)
.-+.+|+|+....+
T Consensus 104 ~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 104 AEIGDVSILVNNAGV 118 (272)
T ss_dssp HHTCCCSEEEECCCC
T ss_pred HHCCCCcEEEECCCc
Confidence 01357888876543
No 497
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.94 E-value=1.9 Score=38.63 Aligned_cols=92 Identities=12% Similarity=0.122 Sum_probs=54.1
Q ss_pred CCeEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCCchhhheec
Q 021344 167 GGLLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAG 244 (314)
Q Consensus 167 ~~~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~~fD~V~~~ 244 (314)
..+|.=||+|. |. ++..+++.+. +|+++|.++..++.+.+ .++.. ..+..++--.....|+|+..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~--~V~v~dr~~~~~~~l~~----------~g~~~-~~s~~e~~~~a~~~DvVi~~ 88 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH--ECVVYDLNVNAVQALER----------EGIAG-ARSIEEFCAKLVKPRVVWLM 88 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHT----------TTCBC-CSSHHHHHHHSCSSCEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHH----------CCCEE-eCCHHHHHhcCCCCCEEEEe
Confidence 46899999987 44 5667777775 99999999987766554 11111 01111110001234777654
Q ss_pred chhccCCCHHHHHHHHHhhcccCcEEEEEe
Q 021344 245 AALHCWPSPSNAVAEISRILRSGGVFVGTT 274 (314)
Q Consensus 245 ~vl~h~~d~~~~l~~i~r~LkpGG~l~i~~ 274 (314)
-.-. ....+++++...|++|.+++-.+
T Consensus 89 vp~~---~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 89 VPAA---VVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp SCGG---GHHHHHHHHGGGCCTTCEEEECS
T ss_pred CCHH---HHHHHHHHHHhhCCCCCEEEeCC
Confidence 2211 34567788888888877665433
No 498
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.67 E-value=10 Score=31.73 Aligned_cols=77 Identities=23% Similarity=0.324 Sum_probs=55.0
Q ss_pred CCCeEEEEcC-ccc--H-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC--------
Q 021344 166 QGGLLVDVSC-GSG--L-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-------- 233 (314)
Q Consensus 166 ~~~~iLDiGc-G~G--~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-------- 233 (314)
.++++|-.|+ |.| . ++..|++.+. +|+.+|.+...++...+.++..+ ..++.++.+|+.+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG---LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC---SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC---CCceEEEEeCCCCHHHHHHHHHHH
Confidence 4678999997 554 3 5677777776 89999999988887777665543 3689999999976421
Q ss_pred --CCCchhhheecchh
Q 021344 234 --ASGFVDAVHAGAAL 247 (314)
Q Consensus 234 --~~~~fD~V~~~~vl 247 (314)
.-+..|+++.+..+
T Consensus 96 ~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCcEEEECCCc
Confidence 01357888876554
No 499
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=78.39 E-value=7.5 Score=33.00 Aligned_cols=90 Identities=14% Similarity=0.183 Sum_probs=51.9
Q ss_pred eEEEEcCcc-cH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCCCCC-chhhheecc
Q 021344 169 LLVDVSCGS-GL-FSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASG-FVDAVHAGA 245 (314)
Q Consensus 169 ~iLDiGcG~-G~-~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~~~~-~fD~V~~~~ 245 (314)
+|.=||+|. |. ++..+.+.+...+|+++|.++..++.+++ .+ .... ...|..+. -. ..|+|+..-
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g----~~~~-~~~~~~~~---~~~~aDvVilav 70 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LG----IIDE-GTTSIAKV---EDFSPDFVMLSS 70 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TT----SCSE-EESCGGGG---GGTCCSEEEECS
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH----CC----Cccc-ccCCHHHH---hcCCCCEEEEcC
Confidence 688899987 44 45556655533479999999987776654 12 1111 11222111 12 468777542
Q ss_pred hhccCCCHHHHHHHHHhhcccCcEEEEE
Q 021344 246 ALHCWPSPSNAVAEISRILRSGGVFVGT 273 (314)
Q Consensus 246 vl~h~~d~~~~l~~i~r~LkpGG~l~i~ 273 (314)
--. ....++.++...+++|.+++..
T Consensus 71 p~~---~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 71 PVR---TFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp CHH---HHHHHHHHHHHHSCTTCEEEEC
T ss_pred CHH---HHHHHHHHHHhhCCCCcEEEEC
Confidence 211 1235677788888888765543
No 500
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=78.26 E-value=12 Score=30.93 Aligned_cols=76 Identities=22% Similarity=0.231 Sum_probs=52.1
Q ss_pred CCCeEEEEcCccc---HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCCCeEEEEecCCCCCC-----C---
Q 021344 166 QGGLLVDVSCGSG---LFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPF-----A--- 234 (314)
Q Consensus 166 ~~~~iLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~lp~-----~--- 234 (314)
.++++|-.|++.| .++..|++.|. +|+.++.++..++...+.+...+ .++.++.+|+.+... .
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGA--AVAIAARRVEKLRALGDELTAAG----AKVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHHH
Confidence 3568999997765 25566666776 89999999887776666555433 578899999876321 0
Q ss_pred --CCchhhheecchh
Q 021344 235 --SGFVDAVHAGAAL 247 (314)
Q Consensus 235 --~~~fD~V~~~~vl 247 (314)
-+..|+++.+..+
T Consensus 80 ~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 80 EALGGLDILVNNAGI 94 (247)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1357888775543
Done!