Query 021345
Match_columns 314
No_of_seqs 123 out of 220
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 16:18:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021345.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021345hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gala_ b.29.1.3 (A:) Galectin 10.3 2.1E+02 0.015 20.9 5.4 74 102-195 27-100 (133)
2 d2ay0a1 a.43.1.11 (A:3-45) Bif 9.7 14 0.0011 23.8 -1.6 25 142-167 9-35 (43)
3 d1l5aa1 c.43.1.2 (A:1-174) Vib 8.8 1.4E+02 0.01 22.0 3.8 38 112-150 16-56 (174)
4 d2gw6a1 c.52.2.1 (A:2-123) tRN 8.5 85 0.0062 24.0 2.3 66 49-126 56-121 (122)
5 d1lcla_ b.29.1.3 (A:) Charcot- 7.4 3.6E+02 0.026 19.7 5.8 72 103-195 33-104 (141)
6 d2fsra1 d.108.1.1 (A:4-167) Pr 6.1 92 0.0067 22.0 1.3 22 220-243 142-163 (164)
7 d1mg7a1 d.14.1.6 (A:14-187) Ea 5.9 92 0.0067 24.9 1.3 23 136-158 18-42 (174)
8 d2fbea1 b.29.1.22 (A:1-188) Si 5.4 75 0.0055 25.1 0.4 20 172-194 52-71 (188)
9 d2auaa1 d.166.1.6 (A:2-195) Hy 5.3 87 0.0064 25.7 0.8 21 225-245 169-190 (194)
10 d2o3aa1 c.116.1.8 (A:1-167) Un 4.9 1.2E+02 0.0087 24.3 1.4 22 133-155 135-159 (167)
No 1
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.28 E-value=2.1e+02 Score=20.89 Aligned_cols=74 Identities=11% Similarity=0.092 Sum_probs=44.7
Q ss_pred CeEEEEEEEecCCCCceEEEEeeeCCCCCCchhHHHHhhCChhhhccceeEEeeeccchhHHHhhhCCCCceeeecceee
Q 021345 102 PFVWAFNLQVPSKENYSAIAYFVATKPIPEGSLVDRFLKGDDAFRLSRLKLIANIVQGPWIVKKAVGEQAICVIGRALSC 181 (314)
Q Consensus 102 Pf~fiVNlqvP~~p~~slV~Yf~~~e~~p~~~Ll~rFl~GDD~fRN~RfKLIp~Vv~GpwiVrkaVG~kp~~llGr~l~~ 181 (314)
+-=|.|||+-+..++-.+++.|.+. +.+. .=.|| .-.+|.|=-..-.+.-| ..-|+.-++
T Consensus 27 ~~~F~inl~~~~~~~~di~~Hfn~R--f~~~----------~IV~N-------s~~~g~Wg~Eer~~~~P-f~~G~~F~l 86 (133)
T d2gala_ 27 ASRFHVNLLCGEEQGSDAALHFNPR--LDTS----------EVVFN-------SKEQGSWGREERGPGVP-FQRGQPFEV 86 (133)
T ss_dssp CCBEEEEEESSSSTTCCEEEEEEEE--TTTT----------EEEEE-------EEETTEECCCEECSSCC-CCTTCEEEE
T ss_pred CCEEEEEEEeCCCCCCCEEEEEeeE--cCCC----------EEEEE-------CCcCCeECCceEECCCC-CCCCCeeEE
Confidence 4468899998766666788888874 1111 11122 23345553222223334 667777777
Q ss_pred eEEecCCEEEEEEE
Q 021345 182 NYCVGENFLEVDMD 195 (314)
Q Consensus 182 ~Y~~g~nYlEiDVD 195 (314)
....+.++|+|-||
T Consensus 87 ~I~~~~~~f~V~vn 100 (133)
T d2gala_ 87 LIIASDDGFKAVVG 100 (133)
T ss_dssp EEEECSSEEEEEET
T ss_pred EEEECCCEEEEEEC
Confidence 77788888888887
No 2
>d2ay0a1 a.43.1.11 (A:3-45) Bifunctional protein putA {Escherichia coli [TaxId: 562]}
Probab=9.68 E-value=14 Score=23.76 Aligned_cols=25 Identities=40% Similarity=0.733 Sum_probs=20.3
Q ss_pred ChhhhccceeEEeeeccc--hhHHHhhh
Q 021345 142 DDAFRLSRLKLIANIVQG--PWIVKKAV 167 (314)
Q Consensus 142 DD~fRN~RfKLIp~Vv~G--pwiVrkaV 167 (314)
||+-| +|+|-++...+- =|++|+|+
T Consensus 9 Dd~~r-~Ri~~lA~~~~RtpHWL~kqAI 35 (43)
T d2ay0a1 9 DDATR-ERIKSAATRIDRTPHWLIKQAI 35 (43)
T ss_dssp CHHHH-HHHHHHHHHTTCCHHHHHHHHH
T ss_pred CHHHH-HHHHHHHHhcCCCHHHHHHHHH
Confidence 78888 899988888773 49999886
No 3
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]}
Probab=8.77 E-value=1.4e+02 Score=21.96 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=27.5
Q ss_pred cCCCCceEEEEeeeCCCCCCc---hhHHHHhhCChhhhccce
Q 021345 112 PSKENYSAIAYFVATKPIPEG---SLVDRFLKGDDAFRLSRL 150 (314)
Q Consensus 112 P~~p~~slV~Yf~~~e~~p~~---~Ll~rFl~GDD~fRN~Rf 150 (314)
|+.+.|++..++.++.++... +.+.+.+..-+.+| .||
T Consensus 16 p~~~~yni~~~~~i~g~ld~~~l~~A~~~l~~rh~~LR-t~f 56 (174)
T d1l5aa1 16 PHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFR-ARF 56 (174)
T ss_dssp TTSCCSEEEEEEEEESSCCHHHHHHHHHHHHHTCGGGG-EEE
T ss_pred CCCCeeeccEEEEEcCCCCHHHHHHHHHHHHHhCchhe-EEE
Confidence 777889999999998776544 34555666667777 666
No 4
>d2gw6a1 c.52.2.1 (A:2-123) tRNA-splicing endonuclease subunit Sen15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.52 E-value=85 Score=23.97 Aligned_cols=66 Identities=18% Similarity=0.235 Sum_probs=40.8
Q ss_pred CcCCCccccCCCCccceeeeeEeeeCccchhhhcccchhHHHHHHhhcCCCCCCeEEEEEEEecCCCCceEEEEeeeC
Q 021345 49 YLSTKVKIPAGEYILKPLGFDWVKSYTKIGAVLNHQNNRVRKAIEEAFPTGDKPFVWAFNLQVPSKENYSAIAYFVAT 126 (314)
Q Consensus 49 Yl~dkkKvps~~~l~~lvgvDlf~s~~ki~hIa~~~~~~v~~~~~~~~~~~~~Pf~fiVNlqvP~~p~~slV~Yf~~~ 126 (314)
||.-|+|.-++..++-++-++.=-+-.++..+-.+... .. .....|..|++-|+=++ |-|.||+++
T Consensus 56 yL~gr~~~~~~~qv~iP~p~~~sls~~~i~~~~~~~~~-----p~---~~~~~~~s~tLai~d~D----STIvYYrmt 121 (122)
T d2gw6a1 56 CLVGTEIEGEGLQTVVPTPITASLSHNRIREILKASRK-----LQ---GDPDLPMSFTLAIVESD----STIVYYKLT 121 (122)
T ss_dssp EEEEESSTTCCCCEEEEEETTCEEEHHHHHHHHHHHHH-----HT---TCSSCCCEEEEEEECTT----SCEEEEEEE
T ss_pred EEEcccccCCCccEEEeeccccccCHHHHHHHHHhccC-----Cc---CCcCccceEEEEEEcCC----CeEEEEEcc
Confidence 77778888888889988888766666666655432110 00 11234555555666555 667788875
No 5
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.40 E-value=3.6e+02 Score=19.74 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=44.5
Q ss_pred eEEEEEEEecCCCCceEEEEeeeCCCCCCchhHHHHhhCChhhhccceeEEeeeccchhHHHhhhCCCCceeeecceeee
Q 021345 103 FVWAFNLQVPSKENYSAIAYFVATKPIPEGSLVDRFLKGDDAFRLSRLKLIANIVQGPWIVKKAVGEQAICVIGRALSCN 182 (314)
Q Consensus 103 f~fiVNlqvP~~p~~slV~Yf~~~e~~p~~~Ll~rFl~GDD~fRN~RfKLIp~Vv~GpwiVrkaVG~kp~~llGr~l~~~ 182 (314)
--|.||+|....+.-.+.+.|... | . ++ -+...-.+|-|=--.-.+.-| ..-|+.-++.
T Consensus 33 ~~F~inf~~~~~~~~di~lHfn~R-----------f-------~-~~-iV~Ns~~~g~Wg~Eer~~~~P-f~~g~~F~l~ 91 (141)
T d1lcla_ 33 PYLQVDFHTEMKEESDIVFHFQVC-----------F-------G-RR-VVMNSREYGAWKQQVESKNMP-FQDGQEFELS 91 (141)
T ss_dssp CEEEEEEESSSSTTSCEEEEEEEE-----------T-------T-TE-EEEEEEETTEECCCEEECCCC-CCTTCCEEEE
T ss_pred CEEEEEeEeCCCCCCCeEEEEEEc-----------C-------C-Ce-EEEECccCCCcCCceEEcccc-ccCCCeEEEE
Confidence 468899997655666788898873 2 0 11 123333455563211123334 6667777788
Q ss_pred EEecCCEEEEEEE
Q 021345 183 YCVGENFLEVDMD 195 (314)
Q Consensus 183 Y~~g~nYlEiDVD 195 (314)
...++++++|.||
T Consensus 92 I~~~~~~f~V~vN 104 (141)
T d1lcla_ 92 ISVLPDKYQVMVN 104 (141)
T ss_dssp EEECSSEEEEEET
T ss_pred EEECCCEEEEEEC
Confidence 8888888888876
No 6
>d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=6.06 E-value=92 Score=21.98 Aligned_cols=22 Identities=18% Similarity=0.427 Sum_probs=16.9
Q ss_pred eeEeeccCCCCccccchhceeeec
Q 021345 220 LAFLLESQTESELPEQILGAFRFS 243 (314)
Q Consensus 220 ~gFvIEG~~eeELPE~lLG~vRl~ 243 (314)
+||.+||..+.+-|+.+ .-|++
T Consensus 142 ~GF~~eg~~~~~~~~~~--~yr~~ 163 (164)
T d2fsra1 142 IGGTLDPLAPRSDPEDL--VYRYH 163 (164)
T ss_dssp TTCEECTTSCCSSTTCE--EEEEC
T ss_pred CCCEEeeeEcccCCCce--EEeeC
Confidence 68999999888877766 45655
No 7
>d1mg7a1 d.14.1.6 (A:14-187) Early switch protein XOL-1, N-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=5.89 E-value=92 Score=24.87 Aligned_cols=23 Identities=26% Similarity=0.427 Sum_probs=12.3
Q ss_pred HHHhh--CChhhhccceeEEeeecc
Q 021345 136 DRFLK--GDDAFRLSRLKLIANIVQ 158 (314)
Q Consensus 136 ~rFl~--GDD~fRN~RfKLIp~Vv~ 158 (314)
-.|++ .|..|||+.+-.-|+||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~APHvV~ 42 (174)
T d1mg7a1 18 LTYMETEDDPNFRNSKLAAAPHTVH 42 (174)
T ss_dssp HHTC----------CEEEEEEEEEE
T ss_pred eEeeeccCCCCcccchhccCCeEEe
Confidence 34554 466999999999999997
No 8
>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.40 E-value=75 Score=25.05 Aligned_cols=20 Identities=35% Similarity=0.949 Sum_probs=17.1
Q ss_pred ceeeecceeeeEEecCCEEEEEE
Q 021345 172 ICVIGRALSCNYCVGENFLEVDM 194 (314)
Q Consensus 172 ~~llGr~l~~~Y~~g~nYlEiDV 194 (314)
+++||.. .|..|..|-||+|
T Consensus 52 ~~VLg~~---~fssGrHYWEV~V 71 (188)
T d2fbea1 52 LCVLGTP---RFTSGRHYWEVDV 71 (188)
T ss_dssp CEEEESC---CBSSSEEEEEEEC
T ss_pred eeccccc---cccCCCEEEEEEe
Confidence 3899986 6888999999987
No 9
>d2auaa1 d.166.1.6 (A:2-195) Hypothetical protein BC2332 {Bacillus cereus [TaxId: 1396]}
Probab=5.28 E-value=87 Score=25.73 Aligned_cols=21 Identities=29% Similarity=0.624 Sum_probs=15.2
Q ss_pred ccCCCCccccchh-ceeeeccc
Q 021345 225 ESQTESELPEQIL-GAFRFSEL 245 (314)
Q Consensus 225 EG~~eeELPE~lL-G~vRl~~l 245 (314)
.|.++-||||.|+ |.+|+-++
T Consensus 169 ~G~~~npl~E~Li~GpI~Vv~i 190 (194)
T d2auaa1 169 KGNIRNELPELLINGEIEVVEI 190 (194)
T ss_dssp HCC--CCSCEEEEEEEEEEEEE
T ss_pred CCCCCCCCceEEecCCEEEEEe
Confidence 3577899999999 88887654
No 10
>d2o3aa1 c.116.1.8 (A:1-167) Uncharacterized protein AF0751 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=4.95 E-value=1.2e+02 Score=24.29 Aligned_cols=22 Identities=36% Similarity=0.673 Sum_probs=17.3
Q ss_pred hhHHHHhhC---ChhhhccceeEEee
Q 021345 133 SLVDRFLKG---DDAFRLSRLKLIAN 155 (314)
Q Consensus 133 ~Ll~rFl~G---DD~fRN~RfKLIp~ 155 (314)
=+|+|++ | +-+|-+.++|+||.
T Consensus 135 iFLDrl~-G~~l~~~F~~akl~ViPs 159 (167)
T d2o3aa1 135 VFLDRVL-GKVFDISFDDAKIKVIPS 159 (167)
T ss_dssp HHHHHHT-CCTTTCCCTTCSSEEECC
T ss_pred HHHHHhh-ChHhhccCCCCeEEEeec
Confidence 3677777 7 45788999999996
Done!