BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021350
(313 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HX1|A Chain A, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|B Chain B, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|C Chain C, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|D Chain D, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
Length = 284
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 24/256 (9%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGF 87
++K D FGVL PG +T + L G +++N + R+ + D LG
Sbjct: 13 KYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGL 72
Query: 88 DPSLFAGAITSGELTHQYL-LRRDDAWFAALGR-SCIHMTWSDRGAISLEGLGLKVVE-- 143
I+SG +T +Y+ L+ D A LG + + SD ++ L + ++
Sbjct: 73 FSITADKIISSGXITKEYIDLKVDGGIVAYLGTANSANYLVSD----GIKXLPVSAIDDS 128
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARA- 202
N+ E + ++ EG DL K + + + IP +VAN D +
Sbjct: 129 NIGEVNALVLLDDEGFNW---------FHDLNKTVNLLRKRTIPAIVANTDNTYPLTKTD 179
Query: 203 LRVMPGTLASKFEK-LGGEVRWMGKPDK----IIYKSAMAMVGVDACDSIAVGDSLHHDI 257
+ + G +A+ E LG GKPD Y + + + VGD+LH DI
Sbjct: 180 VAIAIGGVATXIESILGRRFIRFGKPDSQXFXFAYDXLRQKXEISKREILXVGDTLHTDI 239
Query: 258 KGANAAGIQSVFIIGG 273
G N G+ + ++ G
Sbjct: 240 LGGNKFGLDTALVLTG 255
>pdb|3QGM|A Chain A, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|B Chain B, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|C Chain C, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|D Chain D, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
Length = 268
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 48/291 (16%)
Query: 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGFDP 89
K +++D GV+ P P + ++ L G K++ +SN+S R+ + ++L+S G +
Sbjct: 9 KGYIIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE- 67
Query: 90 SLFAGAITSGE---LTHQYLLRRDDAWFAALGRSCIHMTWSDRGAIS-LEGLGLKVVENV 145
GE L Y R + A + T + G I L GL++V +
Sbjct: 68 --------VGEDEILVATYATAR---FIAREKPNAKVFTTGEEGLIEELRLAGLEIV-DY 115
Query: 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRV 205
+EA++++ G R ++ + K L C + I + NPD +
Sbjct: 116 DEAEYLVV----------GSNRKINFELXTKALRACL-RGIRYIATNPDRIFPAEDG--P 162
Query: 206 MPGT---LASKFEKLGGEVRWM-GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN 261
+PGT + + + G E + GKP ++I + A+ ++G+DA D VGD + D+
Sbjct: 163 IPGTGXIIGALYWXTGREPDVVVGKPSEVIXREALDILGLDAKDVAVVGDQIDVDVAAGK 222
Query: 262 AAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312
A G ++V ++ G+ E ++ + ++ P YV S
Sbjct: 223 AIGAETVLVLTGVTTRE-------------NLDQXIERHGLKPDYVFNSLK 260
>pdb|3PDW|A Chain A, Crystal Structure Of Putative P-Nitrophenyl Phosphatase
From Bacillus Subtilis
Length = 266
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 27/255 (10%)
Query: 28 RRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAK-MVVISNSSRRASTTIDKLKSLG 86
+ +K +L+D G +++G + A + L G + V +NSSR DKL S
Sbjct: 4 KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVS-- 61
Query: 87 FD-PSLFAGAITSGELTHQYLLR-RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN 144
FD P+ T+ T Q++ + + DA +G I R AI GL
Sbjct: 62 FDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGI------RQAIEENGLTF----G 111
Query: 145 VEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALR 204
E ADF++ + V +++++ + + IP R L
Sbjct: 112 GENADFVVVGIDRSITYEKFAVGCLAIRNGARFISTNGDIAIPT-----------ERGLL 160
Query: 205 VMPGTLASKFE-KLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA 263
G+L S G + ++GKP+ II + AM ++G D +++ VGD+ DI A
Sbjct: 161 PGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINA 220
Query: 264 GIQSVFIIGGIHATE 278
G+ ++ + G+ E
Sbjct: 221 GMDTLLVHTGVTKRE 235
>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
pdb|2CFT|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase With Its Substrate
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 107/266 (40%), Gaps = 34/266 (12%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 20 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88 D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
LF+ A+ + L Q L DA A L G GL+
Sbjct: 80 GGLRAEQLFSSALCAARLLRQRLPGPPDAPGA---------------VFVLGGEGLRA-- 122
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQ-----DLEKILEICASKKIP---MVVANPDY 195
+ A LA + VR + + K+ E CA + P +V + D
Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182
Query: 196 VTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
+ R PGT LA+ E G + +GKP +++ +D ++ VGD
Sbjct: 183 WHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDR 241
Query: 253 LHHDIKGANAAGIQSVFIIGGIHATE 278
L DI + G+ +V + G+ E
Sbjct: 242 LETDILFGHRCGMTTVLTLTGVSRLE 267
>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 105/266 (39%), Gaps = 34/266 (12%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 20 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88 D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
LF+ A+ + L Q L DA A L G GL+
Sbjct: 80 GGLRAEQLFSSALCAARLLRQRLPGPPDAPGA---------------VFVLGGEGLRA-- 122
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQ-----DLEKILEICASKKIP---MVVANPDY 195
+ A LA + VR + + K+ E CA + P +V + D
Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182
Query: 196 VTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
+ R PGT LA+ E G + +GKP ++ +D ++ VGD
Sbjct: 183 WHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYXFECITENFSIDPARTLXVGDR 241
Query: 253 LHHDIKGANAAGIQSVFIIGGIHATE 278
L DI + G +V + G+ E
Sbjct: 242 LETDILFGHRCGXTTVLTLTGVSRLE 267
>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
pdb|2P27|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Mg2+ At 1.9 A Resolution
pdb|2P69|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Plp
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 105/266 (39%), Gaps = 34/266 (12%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTID-KLKSLGF 87
R + L D GVL +G++ PGA LE LA G + +SN+SRRA + + LGF
Sbjct: 20 RAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGF 79
Query: 88 D----PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE 143
LF+ A+ + L Q L DA A L G GL+
Sbjct: 80 GGLRAEQLFSSALCAARLLRQRLPGPPDAPGA---------------VFVLGGEGLRA-- 122
Query: 144 NVEEADFILAHGTEGMGLPSGDVRPMSLQ-----DLEKILEICASKKIP---MVVANPDY 195
+ A LA + VR + + K+ E CA + P +V + D
Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182
Query: 196 VTVEARALRVMPGT--LASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252
+ R PGT LA+ E G + +GKP ++ +D ++ VGD
Sbjct: 183 WHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYXFECITENFSIDPARTLXVGDR 241
Query: 253 LHHDIKGANAAGIQSVFIIGGIHATE 278
L DI + G +V + G+ E
Sbjct: 242 LETDILFGHRCGXTTVLTLTGVSRLE 267
>pdb|1PW5|A Chain A, Putative Nagd Protein
Length = 253
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 26/249 (10%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGF 87
+ + ++LD G + PG++ LE L + V +N SS A + KL++ G
Sbjct: 4 KIELFILDXDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNXGV 63
Query: 88 D-PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVE 146
D P +TSGE+T ++ L+R GR I + + + E G + E E
Sbjct: 64 DVPD--DAVVTSGEITAEHXLKR-------FGRCRIFLLGTPQLKKVFEAYGHVIDE--E 112
Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
DF++ G + ++ + L+K + K + +PD
Sbjct: 113 NPDFVVL----------GFDKTLTYERLKKACILLRKGKF-YIATHPDINCPSKEGPVPD 161
Query: 207 PGTLASKFEKLGGEVRWM--GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264
G++ + E G + GKP+ ++ GV VGD L+ D+K AG
Sbjct: 162 AGSIXAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAG 221
Query: 265 IQSVFIIGG 273
I S+ ++ G
Sbjct: 222 IVSILVLTG 230
>pdb|1VJR|A Chain A, Crystal Structure Of 4-nitrophenylphosphatase (tm1742)
From Thermotoga Maritima At 2.40 A Resolution
Length = 271
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 26/249 (10%)
Query: 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGF 87
+ + ++LD G + PG++ LE L + V +N SS A + KL++ G
Sbjct: 16 KIELFILDXDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNXGV 75
Query: 88 D-PSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVE 146
D P +TSGE+T ++ L+R GR I + + + E G + E E
Sbjct: 76 DVPD--DAVVTSGEITAEHXLKR-------FGRCRIFLLGTPQLKKVFEAYGHVIDE--E 124
Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
DF++ G + ++ + L+K + K + +PD
Sbjct: 125 NPDFVVL----------GFDKTLTYERLKKACILLRKGKF-YIATHPDINCPSKEGPVPD 173
Query: 207 PGTLASKFEKLGGEVRWM--GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264
G++ + E G + GKP+ ++ GV VGD L+ D+K AG
Sbjct: 174 AGSIXAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERXAXVGDRLYTDVKLGKNAG 233
Query: 265 IQSVFIIGG 273
I S+ ++ G
Sbjct: 234 IVSILVLTG 242
>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
pdb|1YV9|B Chain B, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
Length = 264
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 36/253 (14%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
++ +L+D G ++ GK+P P +E L + ++N++ ++ T+ + + FD
Sbjct: 5 YQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDI 64
Query: 90 SLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA- 148
+ A + + L + +M ++RG K V + EA
Sbjct: 65 HVPASLVYTATLA-----------------TIDYMKEANRG---------KKVFVIGEAG 98
Query: 149 --DFILAHGTE-GMGLPSGDVRPMSLQ-DLEKIL--EICASKKIPMVVANPDYVTVEARA 202
D IL G E P V + + EK++ + K + NPD R
Sbjct: 99 LIDLILEAGFEWDETNPDYVVVGLDTELSYEKVVLATLAIQKGALFIGTNPDKNIPTERG 158
Query: 203 LRVMPGTLASKFEKLGGEVR--WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGA 260
L G++ + F + + + ++GKP II + A+A +GV+ I VGD+ DI+
Sbjct: 159 LLPGAGSVVT-FVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSG 217
Query: 261 NAAGIQSVFIIGG 273
GI S+ + G
Sbjct: 218 IQNGIDSLLVTSG 230
>pdb|2C4N|A Chain A, Nagd From E.Coli K-12 Strain
Length = 250
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 33/253 (13%)
Query: 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN-SSRRASTTIDKLKSLGFD- 88
K + D GVL PGA L + G +V+++N S+ ++ + G D
Sbjct: 4 KNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63
Query: 89 -PSLFAGAITSGELTHQYLLRRDDAWFAALGR-SCIHMTWSDRGAISLEGLGLKVVENVE 146
S+F TS T +L R++ +G + IH L G + +
Sbjct: 64 PDSVF---YTSAMATADFLRRQEGKKAYVVGEGALIH---------ELYKAGFTITD--V 109
Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
DF++ G+ R + + K A+ + NPD R
Sbjct: 110 NPDFVIV----------GETRSYNWDMMHKAAYFVANGA-RFIATNPD---THGRGFYPA 155
Query: 207 PGTLASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI 265
G L + EK+ G + ++GKP I ++A+ + + +++ VGD+L DI AG+
Sbjct: 156 CGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGL 215
Query: 266 QSVFIIGGIHATE 278
+++ ++ G+ + +
Sbjct: 216 ETILVLSGVSSLD 228
>pdb|3IB6|A Chain A, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|B Chain B, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|C Chain C, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
pdb|3IB6|D Chain D, Crystal Structure Of An Uncharacterized Protein From
Listeria Monocytogenes Serotype 4b
Length = 189
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
M KPDK I+ + + +D +++ VG++ DI GAN AGI ++++
Sbjct: 95 MEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWL 141
>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase
(Ph1655) From Pyrococcus Horikoshii Ot3
Length = 241
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHAT-ELGLD 282
+ KP I+K A+ V +++ VGD L+ DI GA G+++V+ G H+ EL
Sbjct: 148 VKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYR 207
Query: 283 SYG--EVADLSSVQTLVSK 299
Y E+ +L S+ ++++
Sbjct: 208 KYADYEIDNLESLLEVLAR 226
>pdb|1YS9|A Chain A, Crystal Sructure Of Phosphatase Spy1043 From Streptococcus
Pyogenes
Length = 254
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 102/261 (39%), Gaps = 42/261 (16%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
+K +L+D G ++ GK P ++ L G ++++N++ R + +
Sbjct: 3 YKGYLIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSM------- 55
Query: 90 SLFAGAITSGELTHQYLLRRD-DAWFAALGRSCIHMTWSDRG--AISLEGLGLK------ 140
L +Q+ + + + A + +M +RG A + GLK
Sbjct: 56 -----------LANQFHVETSIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAA 104
Query: 141 -VVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVE 199
VE +E +++ +GL S ++ I + K + NPD
Sbjct: 105 GYVEELENPAYVV------VGLDS-----QVTYEMLAIATLAIQKGALFIGTNPDLNIPT 153
Query: 200 ARALRVMPGTLASKFEKLGGEVR--WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDI 257
R L G L + E V+ ++GKP+ II ++ ++G+ +++ VGD+ DI
Sbjct: 154 ERGLMPGAGALNALLEA-ATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDI 212
Query: 258 KGANAAGIQSVFIIGGIHATE 278
I ++ + G E
Sbjct: 213 MAGIQNDIATILVTTGFTRPE 233
>pdb|3HLT|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
pdb|3HLT|C Chain C, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
Length = 266
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 97/254 (38%), Gaps = 32/254 (12%)
Query: 24 IAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKL 82
+A R KA L+D G LH PGA L+ L + ++N+++ + + ++L
Sbjct: 1 MAACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERL 60
Query: 83 KSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAAL--GRSCIHMTWSDRGAISLEGLGLK 140
+ L FD S +D F +L RS + R + ++ L
Sbjct: 61 RKLEFDIS-------------------EDEIFTSLTAARSLLERKQV-RPMLLVDDRALP 100
Query: 141 VVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEA 200
+ ++ +D MGL L ++L A P++ +
Sbjct: 101 DFKGIQTSD----PNAVVMGLAPEHFHYQILNQAFRLLLDGA----PLIAIHKARYYKRK 152
Query: 201 RALRVMPGTLASKFE-KLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKG 259
L + PG + E + +GKP+K + A+ G + +++ +GD D+ G
Sbjct: 153 DGLALGPGPFVTALEYATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGG 212
Query: 260 ANAAGIQSVFIIGG 273
A G+ + + G
Sbjct: 213 AQDVGMLGILVKTG 226
>pdb|2X4D|A Chain A, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
pdb|2X4D|B Chain B, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
Length = 271
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 169 MSLQDLEKILEICASKKIPMVVA---NPDYVTVEARALRVMPGTLASKFEKLGGEVRWMG 225
S Q++ ++ + P++++ Y L V P A ++ G + +G
Sbjct: 131 FSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLMLDVGPYMKALEY-ACGIKAEVVG 189
Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI------HATEL 279
KP +KSA+ +GV+A ++ +GD + D+ GA G++++ + G H E+
Sbjct: 190 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEV 249
Query: 280 GLDSY 284
D Y
Sbjct: 250 KADGY 254
>pdb|3VAY|A Chain A, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
pdb|3VAY|B Chain B, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
Length = 230
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDS 283
+GKPD + A+ VDA ++ VGD DI GA AG+++++ A +
Sbjct: 153 IGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLP 212
Query: 284 YGEVADLSSVQTLVSKY 300
E+ +LS + +++++
Sbjct: 213 DAEIHNLSQLPEVLARW 229
>pdb|1YDF|A Chain A, Crystal Structure Of A Had-like Phosphatase From
Streptococcus Pneumoniae
Length = 257
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 30/255 (11%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
+K +L+D G ++ GK P + + L + ++N++ R ++ ++ + F+
Sbjct: 3 YKGYLIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLAQNFNI 62
Query: 90 SLFAGAITSGEL-THQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEA 148
+ + L T Y+ LG ++ + GLK E ++ A
Sbjct: 63 DTPLSTVYTATLATIDYM--------NDLGL--------EKTVYVVGEAGLK--EAIKAA 104
Query: 149 DFILAHGTEGMGLPSGDVRPMSLQ-DLEKILE--ICASKKIPMVVANPDYVTVEARALRV 205
++ E P+ V + Q D EK + K + NPD R L
Sbjct: 105 GYV-----EDKEKPAYVVVGLDWQVDYEKFATATLAIQKGAHFIGTNPDLNIPTERGLLP 159
Query: 206 MPGTLASKFEKLGGEVR--WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA 263
G+L + E + V+ ++GKP+ II A+ +G++ + I VGD+ DI+
Sbjct: 160 GAGSLITLLE-VATRVKPVYIGKPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDN 218
Query: 264 GIQSVFIIGGIHATE 278
GI ++ + G E
Sbjct: 219 GIPTLLVTTGFTKAE 233
>pdb|3EPR|A Chain A, Crystal Structure Of Putative Had Superfamily Hydrolase
From Streptococcus Agalactiae
Length = 264
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 58/293 (19%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
+K +L+D G ++ GK P +E L G ++++N++ R ++ ++ GF+
Sbjct: 5 YKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLR-GFNV 63
Query: 90 SLFAGAITSGEL-THQYL--LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVE 146
I + + T Y+ + R + +G + +D G VE+ +
Sbjct: 64 ETPLETIYTATMATVDYMNDMNRGKTAYV-IGEEGLKKAIADAG----------YVEDTK 112
Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM------VVANPDYVTVEA 200
+++ +GL D + A+ + + + NPD
Sbjct: 113 NPAYVV------VGL-----------DWNVTYDKLATATLAIQNGALFIGTNPDLNIPTE 155
Query: 201 RALRVMPGTLASKFEKLGGEVR--WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIK 258
R L G+L + E ++ ++GKP+ II A+ ++ + ++ VGD+ DI
Sbjct: 156 RGLLPGAGSLNALLEA-ATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIM 214
Query: 259 GANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSF 311
I ++ + G E EV DL +Q PSYVL S
Sbjct: 215 AGINNDIDTLLVTTGFTTVE-------EVPDL-PIQ---------PSYVLASL 250
>pdb|2HO4|A Chain A, Crystal Structure Of Protein From Mouse Mm.236127
pdb|2HO4|B Chain B, Crystal Structure Of Protein From Mouse Mm.236127
Length = 259
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 91/253 (35%), Gaps = 32/253 (12%)
Query: 25 AETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTT-IDKLK 83
A R KA L+D G LH PGA L+ L T + ++N+++ +++LK
Sbjct: 2 AARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVXVRFVTNTTKETKKDLLERLK 61
Query: 84 SLGFDPSLFAGAITSGELTHQYLLRRDDAWFAAL--GRSCIHMTWSDRGAISLEGLGLKV 141
L F+ S +D F +L R+ I R + L+ L
Sbjct: 62 KLEFEIS-------------------EDEIFTSLTAARNLIEQKQV-RPXLLLDDRALPE 101
Query: 142 VENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEAR 201
V+ D +GL L ++L A P++ +
Sbjct: 102 FTGVQTQD----PNAVVIGLAPEHFHYQLLNQAFRLLLDGA----PLIAIHKARYYKRKD 153
Query: 202 ALRVMPGTLASKFE-KLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGA 260
L + PG + E + +GKP+K + A+ +++ +GD D+ GA
Sbjct: 154 GLALGPGPFVTALEYATDTKAXVVGKPEKTFFLEALRDADCAPEEAVXIGDDCRDDVDGA 213
Query: 261 NAAGIQSVFIIGG 273
G + + G
Sbjct: 214 QNIGXLGILVKTG 226
>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid
Phosphatase, Nanp
Length = 270
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 217 LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272
+GGE R KP I+ ++GV D + VGD+L DI+G AG+++ I
Sbjct: 178 VGGEQR-EEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN 232
>pdb|1WVI|A Chain A, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|B Chain B, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|C Chain C, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|D Chain D, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
Length = 257
Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 28/254 (11%)
Query: 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89
+K +L+D G ++ GK P ++ L ++++N++ R + ++ + F+
Sbjct: 3 YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNI 62
Query: 90 SLFAGAITSGEL-THQYL--LRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVE 146
I + L T Y+ ++R + +G + + ++ G E+ E
Sbjct: 63 KTPLETIYTATLATIDYMNDMKRGKTAYV-IGETGLKKAVAEAG----------YREDSE 111
Query: 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVM 206
+++ +GL + ++ + L + + K + NPD R L
Sbjct: 112 NPAYVV------VGLDTN----LTYEKL-TLATLAIQKGAVFIGTNPDLNIPTERGLLPG 160
Query: 207 PGTLASKFEKLGGEVR--WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264
G + EK V+ +GKP+ +I A+ +GV ++I VGD+ DI
Sbjct: 161 AGAILFLLEK-ATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKND 219
Query: 265 IQSVFIIGGIHATE 278
I ++ + G E
Sbjct: 220 IATLLVTTGFTKPE 233
>pdb|1ZJJ|A Chain A, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
pdb|1ZJJ|B Chain B, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
Length = 263
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTI-DKLKSLGFDPS 90
A + D GVL+ G + PG +E L G ++N+S + +KL +G D S
Sbjct: 3 AIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVS 62
Query: 91 LFAGAITSGELTHQYLLRRDD 111
+ ITSG T Y+ + D
Sbjct: 63 -SSIIITSGLATRLYMSKHLD 82
>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase
From Aquifex Aeolicus
Length = 222
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
KPYP TLE L + G K+ V+SN S I + +L L G T GE
Sbjct: 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE 137
>pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase
(nanp) From Mus Musculus At 1.90 A Resolution
Length = 260
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 217 LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272
+GGE + KP I+ ++GV D + VGD+L DI+G AG+++ I
Sbjct: 168 IGGEQK-EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN 222
>pdb|3M9L|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5
pdb|2YBD|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Phosphate
pdb|3R09|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Mg
Length = 205
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR 73
AWLL+ L G +P PGA+ + LA G ++ +++ ++R
Sbjct: 56 AWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNAR 97
>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
pdb|2YY6|B Chain B, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
Length = 213
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%)
Query: 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
KPYP TLE L + G K+ V+SN S I + +L L G T GE
Sbjct: 81 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGE 135
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 29/45 (64%)
Query: 56 EMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100
+MLA + + ++ IS + + + +D++KS G++ S +AG ++ E
Sbjct: 62 KMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKE 106
>pdb|3K1Z|A Chain A, Crystal Structure Of Human Haloacid Dehalogenase-like
Hydrolase Domain Containing 3 (hdhd3)
Length = 263
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYG 285
KPD I++ A+ + + + VGD+ D +G A G S ++G + DS
Sbjct: 161 KPDPRIFQEALRLAHXEPVVAAHVGDNYLCDYQGPRAVGXHSFLVVGPQALDPVVRDSVP 220
Query: 286 EVADLSSVQTLVSKYD 301
+ L S+ L+ D
Sbjct: 221 KEHILPSLAHLLPALD 236
>pdb|3KC2|A Chain A, Crystal Structure Of Mitochondrial Had-Like Phosphatase
From Saccharomyces Cerevisiae
pdb|3KC2|B Chain B, Crystal Structure Of Mitochondrial Had-Like Phosphatase
From Saccharomyces Cerevisiae
Length = 352
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 20 GLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS---SRRAS 76
G R T + A+ D GVL GKKP GA L++L ++++N S RA
Sbjct: 3 GKRFFQTTSKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERAR 62
Query: 77 T 77
T
Sbjct: 63 T 63
>pdb|3QNM|A Chain A, Haloalkane Dehalogenase Family Member From Bacteroides
Thetaiotaomicron Of Unknown Function
Length = 240
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVF 269
KP I+ A++ + +S+ +GDS DI GA+ G F
Sbjct: 162 KPRPEIFHFALSATQSELRESLXIGDSWEADITGAHGVGXHQAF 205
>pdb|1YUD|A Chain A, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|B Chain B, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|C Chain C, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|D Chain D, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|E Chain E, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|F Chain F, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|G Chain G, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|H Chain H, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|I Chain I, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12.
pdb|1YUD|J Chain J, X-ray Crystal Structure Of Protein So0799 From Shewanella
Oneidensis. Northeast Structural Genomics Consortium
Target Sor12
Length = 170
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 70 NSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDR 129
SS R+ T D + L S + +GE++H + L D+ W+ G+S S
Sbjct: 33 RSSYRSETAFDPSRQLW---SSIYFLLRTGEVSHFHRLTADEXWYFHAGQSLTIYXISPE 89
Query: 130 GAISLEGLGLKVVENVEEADFILAHG 155
G ++ LGL + E F++ G
Sbjct: 90 GELTTAQLGLDLAAG-ERPQFLVPKG 114
>pdb|3SMV|A Chain A, X-Ray Crystal Structure Of L-Azetidine-2-Carboxylate
Hydrolase
Length = 240
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 226 KPDKIIYK-SAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270
P+ Y A+A G++ D + +SL+HD AN AG+ S +I
Sbjct: 154 NPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI 199
>pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like
Protein Of Unknown Function Atu0790 From Agrobacterium
Tumefaciens Str. C58
Length = 229
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 219 GEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278
G R KPD I+ A GV + V DS+H I GA AAG + + G H
Sbjct: 138 GADRVKPKPD--IFLHGAAQFGVSPDRVVVVEDSVH-GIHGARAAGXRVIGFTGASHT-- 192
Query: 279 LGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFSW 313
S+ + + +T++S+ P+ + W
Sbjct: 193 --YPSHADRLTDAGAETVISRXQDLPAVIAAXAEW 225
>pdb|2YL8|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 434
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 100 ELTHQYLLRRDDAWFAALGRSCIHMTWS--DRGAISLEGLGLKVVENVEEADFILAHGTE 157
E HQ +L +DAW+ LGR+ W D+G ++ + V E AD + G
Sbjct: 276 EKGHQ-ILNTNDAWYYVLGRNADGQGWYNLDQGLNGIKNTPITSVPKTEGADIPIIGGMV 334
Query: 158 G--MGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTL 210
PS P L K++ A+ A DY + E +AL +P L
Sbjct: 335 AAWADTPSARYSPSRLF---KLMRHFANANAEYFAA--DYESAE-QALNEVPKDL 383
>pdb|2YL6|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 434
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 100 ELTHQYLLRRDDAWFAALGRSCIHMTWS--DRGAISLEGLGLKVVENVEEADFILAHGTE 157
E HQ +L +DAW+ LGR+ W D+G ++ + V E AD + G
Sbjct: 276 EKGHQ-ILNTNDAWYYVLGRNADGQGWYNLDQGLNGIKNTPITSVPKTEGADIPIIGGMV 334
Query: 158 G--MGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTL 210
PS P L K++ A+ A DY + E +AL +P L
Sbjct: 335 AAWADTPSARYSPSRLF---KLMRHFANANAEYFAA--DYESAE-QALNEVPKDL 383
>pdb|2YLL|A Chain A, Inhibition Of The Pneumococcal Virulence Factor Strh And
Molecular Insights Into N-Glycan Recognition And
Hydrolysis
Length = 454
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 100 ELTHQYLLRRDDAWFAALGRSCIHMTWS--DRGAISLEGLGLKVVENVEEADFILAHGTE 157
E HQ +L +DAW+ LGR+ W D+G ++ + V E AD + G
Sbjct: 296 EKGHQ-ILNTNDAWYYVLGRNADGQGWYNLDQGLNGIKNTPITSVPKTEGADIPIIGGMV 354
Query: 158 G--MGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTL 210
PS P L K++ A+ A DY + E +AL +P L
Sbjct: 355 AAWADTPSARYSPSRLF---KLMRHFANANAEYFAA--DYESAE-QALNEVPKDL 403
>pdb|3RF6|A Chain A, Crystal Structure Of Glycerol-3 Phosphate Bound Had-Like
Phosphatase From Saccharomyces Cerevisiae
pdb|3RF6|B Chain B, Crystal Structure Of Glycerol-3 Phosphate Bound Had-Like
Phosphatase From Saccharomyces Cerevisiae
Length = 355
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 20 GLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNS---SRRAS 76
G R T + A+ GVL GKKP GA L++L ++++N S RA
Sbjct: 6 GKRFFQTTSKKIAFAFAIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERAR 65
Query: 77 T 77
T
Sbjct: 66 T 66
>pdb|1HJD|A Chain A, Melanoma Inhibitory Activity (Mia) Protein
Length = 101
Score = 28.5 bits (62), Expect = 4.6, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 179 EICA----SKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVR--WMGKPDKIIY 232
++CA S I M VA DY+ + R L + G + F KL G R W G Y
Sbjct: 4 KLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYY 63
Query: 233 KSAMAMVG 240
A +G
Sbjct: 64 GDLAARLG 71
>pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|B Chain B, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|C Chain C, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|D Chain D, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|E Chain E, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|F Chain F, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|G Chain G, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|H Chain H, Crystal Structure Of Yghz From E. Coli
pdb|4AST|A Chain A, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|B Chain B, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|C Chain C, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|D Chain D, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|E Chain E, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|F Chain F, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|G Chain G, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|H Chain H, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
Length = 346
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 18/113 (15%)
Query: 86 GFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN- 144
G+D ++ G SG + +YLL D +G + + +S R V EN
Sbjct: 99 GYD--MWPGPYGSGG-SRKYLLASLDQSLKRMGLEYVDIFYSHR-----------VDENT 144
Query: 145 -VEEADFILAHGTE-GMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDY 195
+EE LAH + G L G + S + +K++E+ KIP+++ P Y
Sbjct: 145 PMEETASALAHAVQSGKALYVG-ISSYSPERTQKMVELLREWKIPLLIHQPSY 196
>pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|B Chain B, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|C Chain C, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|D Chain D, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|E Chain E, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|F Chain F, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|G Chain G, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|H Chain H, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
Length = 366
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 18/113 (15%)
Query: 86 GFDPSLFAGAITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN- 144
G+D ++ G SG + +YLL D +G + + +S R V EN
Sbjct: 119 GYD--MWPGPYGSGG-SRKYLLASLDQSLKRMGLEYVDIFYSHR-----------VDENT 164
Query: 145 -VEEADFILAHGTE-GMGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDY 195
+EE LAH + G L G + S + +K++E+ KIP+++ P Y
Sbjct: 165 PMEETASALAHAVQSGKALYVG-ISSYSPERTQKMVELLREWKIPLLIHQPSY 216
>pdb|1I1J|A Chain A, Structure Of Melanoma Inhibitory Activity Protein: A
Member Of A New Family Of Secreted Proteins
pdb|1I1J|B Chain B, Structure Of Melanoma Inhibitory Activity Protein: A
Member Of A New Family Of Secreted Proteins
pdb|1K0X|A Chain A, Solution Structure Of Melanoma Inhibitory Activity Protein
Length = 108
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 179 EICASKK----IPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVR--WMGKPDKIIY 232
++CA ++ I M VA DY+ + R L + G + F KL G R W G Y
Sbjct: 11 KLCADQECSHPISMAVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYY 70
Query: 233 KSAMAMVG 240
A +G
Sbjct: 71 GDLAARLG 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,266,309
Number of Sequences: 62578
Number of extensions: 366849
Number of successful extensions: 1045
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 991
Number of HSP's gapped (non-prelim): 62
length of query: 313
length of database: 14,973,337
effective HSP length: 99
effective length of query: 214
effective length of database: 8,778,115
effective search space: 1878516610
effective search space used: 1878516610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)