Query 021350
Match_columns 313
No_of_seqs 127 out of 1637
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 09:32:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021350.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021350hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0647 NagD Predicted sugar p 100.0 1.9E-44 4.1E-49 318.0 23.9 253 22-312 2-259 (269)
2 KOG2882 p-Nitrophenyl phosphat 100.0 3.6E-42 7.9E-47 300.3 21.4 263 19-312 13-297 (306)
3 PRK10444 UMP phosphatase; Prov 100.0 2E-39 4.4E-44 286.9 25.1 241 30-312 1-243 (248)
4 TIGR01457 HAD-SF-IIA-hyp2 HAD- 100.0 1.6E-38 3.5E-43 282.1 25.9 245 30-312 1-247 (249)
5 TIGR01452 PGP_euk phosphoglyco 100.0 1.4E-37 3E-42 280.7 25.7 253 29-312 1-277 (279)
6 PLN02645 phosphoglycolate phos 100.0 2.4E-36 5.1E-41 276.5 25.4 263 16-311 16-300 (311)
7 TIGR01458 HAD-SF-IIA-hyp3 HAD- 100.0 6.6E-35 1.4E-39 260.0 25.8 239 30-311 1-247 (257)
8 TIGR01459 HAD-SF-IIA-hyp4 HAD- 100.0 5.7E-33 1.2E-37 245.7 25.4 241 21-272 1-242 (242)
9 TIGR01456 CECR5 HAD-superfamil 100.0 1.1E-32 2.4E-37 253.2 21.8 243 32-312 2-314 (321)
10 KOG3040 Predicted sugar phosph 100.0 2.6E-32 5.6E-37 225.3 19.5 228 27-279 4-234 (262)
11 TIGR01460 HAD-SF-IIA Haloacid 100.0 9.6E-32 2.1E-36 236.9 22.7 223 33-273 1-236 (236)
12 PLN02770 haloacid dehalogenase 99.8 1.4E-20 3.1E-25 167.1 6.5 101 170-274 109-211 (248)
13 COG0546 Gph Predicted phosphat 99.8 4.7E-20 1E-24 160.8 9.3 105 170-278 90-196 (220)
14 TIGR02253 CTE7 HAD superfamily 99.8 7.2E-20 1.6E-24 159.4 10.2 105 170-277 95-201 (221)
15 PRK13288 pyrophosphatase PpaX; 99.8 9.6E-20 2.1E-24 158.1 7.9 106 170-279 83-190 (214)
16 PRK13226 phosphoglycolate phos 99.8 9.1E-20 2E-24 160.0 7.5 104 171-278 97-202 (229)
17 TIGR01422 phosphonatase phosph 99.8 1.9E-19 4.2E-24 160.3 9.6 102 170-275 100-205 (253)
18 PRK10748 flavin mononucleotide 99.8 7E-19 1.5E-23 155.3 12.9 97 170-275 114-212 (238)
19 PRK11587 putative phosphatase; 99.8 8.2E-20 1.8E-24 159.1 6.5 100 170-274 84-185 (218)
20 PRK13478 phosphonoacetaldehyde 99.8 3E-19 6.5E-24 160.3 10.1 102 170-275 102-207 (267)
21 PLN02779 haloacid dehalogenase 99.8 8E-19 1.7E-23 158.9 12.3 109 170-279 145-254 (286)
22 TIGR03351 PhnX-like phosphonat 99.8 5.4E-19 1.2E-23 153.9 9.2 106 170-279 88-199 (220)
23 KOG1618 Predicted phosphatase 99.8 1.6E-17 3.5E-22 145.9 17.1 226 31-276 36-345 (389)
24 PLN03243 haloacid dehalogenase 99.8 4.8E-19 1.1E-23 158.0 7.7 102 171-277 111-214 (260)
25 COG0637 Predicted phosphatase/ 99.8 6.9E-19 1.5E-23 153.5 8.3 102 170-275 87-190 (221)
26 PF13344 Hydrolase_6: Haloacid 99.8 1.8E-18 3.9E-23 132.1 8.4 99 33-139 1-100 (101)
27 PRK06769 hypothetical protein; 99.8 2E-17 4.2E-22 139.0 15.0 51 225-276 92-142 (173)
28 TIGR01449 PGP_bact 2-phosphogl 99.8 1.1E-18 2.5E-23 151.0 7.6 106 170-279 86-193 (213)
29 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2.4E-17 5.1E-22 138.9 14.7 52 224-276 104-156 (176)
30 PRK10826 2-deoxyglucose-6-phos 99.8 2.4E-18 5.3E-23 150.1 8.4 104 170-277 93-198 (222)
31 PLN02575 haloacid dehalogenase 99.7 2.9E-18 6.2E-23 158.9 8.3 101 170-274 217-319 (381)
32 TIGR01454 AHBA_synth_RP 3-amin 99.7 4.4E-18 9.5E-23 146.7 8.8 106 170-279 76-183 (205)
33 PLN02940 riboflavin kinase 99.7 4.1E-18 8.9E-23 160.0 9.2 120 171-297 95-217 (382)
34 PRK08942 D,D-heptose 1,7-bisph 99.7 6.7E-17 1.4E-21 136.7 14.3 53 224-277 101-153 (181)
35 PRK14988 GMP/IMP nucleotidase; 99.7 3.2E-17 6.9E-22 143.4 12.2 124 170-299 94-220 (224)
36 PRK13223 phosphoglycolate phos 99.7 1.2E-17 2.7E-22 150.1 9.5 123 170-297 102-226 (272)
37 PRK13222 phosphoglycolate phos 99.7 1.2E-17 2.6E-22 145.8 9.0 106 170-279 94-201 (226)
38 TIGR01428 HAD_type_II 2-haloal 99.7 2.4E-17 5.1E-22 141.3 10.4 100 171-274 94-195 (198)
39 PF13242 Hydrolase_like: HAD-h 99.7 2.2E-17 4.7E-22 119.3 8.2 72 224-312 2-73 (75)
40 TIGR02252 DREG-2 REG-2-like, H 99.7 4.3E-17 9.3E-22 140.2 10.8 95 171-269 107-203 (203)
41 PRK10563 6-phosphogluconate ph 99.7 2.4E-17 5.2E-22 143.7 8.9 117 171-297 90-209 (221)
42 PRK09449 dUMP phosphatase; Pro 99.7 1.5E-16 3.2E-21 138.9 12.8 100 170-273 96-198 (224)
43 PRK10725 fructose-1-P/6-phosph 99.7 2.6E-17 5.6E-22 139.7 7.7 92 175-271 93-186 (188)
44 TIGR01656 Histidinol-ppas hist 99.7 2.7E-16 5.9E-21 128.5 13.0 48 225-273 100-147 (147)
45 TIGR01990 bPGM beta-phosphoglu 99.7 2.2E-17 4.7E-22 139.7 6.7 96 170-271 88-185 (185)
46 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 2.3E-16 5E-21 126.4 12.3 46 226-271 85-131 (132)
47 TIGR02254 YjjG/YfnB HAD superf 99.7 1.1E-16 2.3E-21 139.5 10.8 102 171-276 99-203 (224)
48 PRK13225 phosphoglycolate phos 99.7 2E-16 4.3E-21 142.1 11.9 102 171-279 144-247 (273)
49 COG1011 Predicted hydrolase (H 99.7 7.8E-17 1.7E-21 140.8 8.6 103 170-276 100-204 (229)
50 TIGR02009 PGMB-YQAB-SF beta-ph 99.7 2.7E-17 5.8E-22 139.2 5.4 95 170-270 89-185 (185)
51 TIGR01668 YqeG_hyp_ppase HAD s 99.7 5.3E-16 1.2E-20 129.9 12.5 55 226-280 91-145 (170)
52 KOG3085 Predicted hydrolase (H 99.7 7.6E-16 1.6E-20 133.3 12.0 104 172-279 116-221 (237)
53 TIGR02247 HAD-1A3-hyp Epoxide 99.7 1.1E-15 2.4E-20 132.2 13.0 104 170-275 95-200 (211)
54 PRK10530 pyridoxal phosphate ( 99.7 4.2E-15 9.1E-20 133.5 16.5 59 28-88 1-60 (272)
55 PLN02919 haloacid dehalogenase 99.6 6.7E-16 1.4E-20 161.2 11.8 102 170-275 162-266 (1057)
56 PRK09456 ?-D-glucose-1-phospha 99.6 1.6E-15 3.5E-20 130.1 12.2 104 171-277 86-191 (199)
57 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 3.1E-15 6.7E-20 124.6 12.1 45 225-269 107-160 (166)
58 TIGR01261 hisB_Nterm histidino 99.6 9.9E-15 2.1E-19 120.9 14.8 53 225-278 102-154 (161)
59 COG2179 Predicted hydrolase of 99.6 4.7E-15 1E-19 119.6 10.8 47 226-272 93-139 (175)
60 PRK06698 bifunctional 5'-methy 99.6 1.5E-15 3.3E-20 146.4 9.4 103 170-279 331-435 (459)
61 TIGR01509 HAD-SF-IA-v3 haloaci 99.6 6.5E-16 1.4E-20 130.2 5.2 95 171-270 87-183 (183)
62 TIGR01993 Pyr-5-nucltdase pyri 99.6 2.4E-15 5.2E-20 127.4 6.7 95 170-270 85-184 (184)
63 PRK01158 phosphoglycolate phos 99.6 1.5E-13 3.2E-18 120.4 17.4 59 28-88 1-60 (230)
64 PRK10513 sugar phosphate phosp 99.6 7.6E-14 1.6E-18 125.3 15.6 60 28-89 1-61 (270)
65 PLN02811 hydrolase 99.6 5.3E-15 1.1E-19 129.0 7.3 106 170-278 79-191 (220)
66 PHA02597 30.2 hypothetical pro 99.6 4.1E-14 8.8E-19 121.2 12.6 97 170-275 75-178 (197)
67 KOG2914 Predicted haloacid-hal 99.6 3E-14 6.5E-19 122.8 11.6 100 170-272 93-197 (222)
68 PRK15126 thiamin pyrimidine py 99.5 8.6E-14 1.9E-18 125.2 13.9 57 30-88 2-59 (272)
69 COG0241 HisB Histidinol phosph 99.5 5.6E-13 1.2E-17 111.0 17.0 56 223-279 102-157 (181)
70 PRK03669 mannosyl-3-phosphogly 99.5 7.1E-13 1.5E-17 119.2 18.4 58 29-88 6-64 (271)
71 COG0561 Cof Predicted hydrolas 99.5 2.3E-13 4.9E-18 121.9 14.9 60 28-89 1-61 (264)
72 cd01427 HAD_like Haloacid deha 99.5 1.1E-13 2.3E-18 110.0 11.2 130 32-270 1-139 (139)
73 PRK10976 putative hydrolase; P 99.5 2.6E-13 5.7E-18 121.5 13.5 57 30-88 2-59 (266)
74 PF13419 HAD_2: Haloacid dehal 99.5 5.6E-15 1.2E-19 122.8 1.3 96 171-270 79-176 (176)
75 TIGR01549 HAD-SF-IA-v1 haloaci 99.5 4.3E-14 9.3E-19 116.1 6.0 86 172-264 67-154 (154)
76 TIGR01548 HAD-SF-IA-hyp1 haloa 99.5 1.5E-13 3.2E-18 117.7 9.1 85 174-263 111-197 (197)
77 PRK05446 imidazole glycerol-ph 99.5 1.1E-12 2.3E-17 121.2 14.9 51 224-275 102-152 (354)
78 TIGR01685 MDP-1 magnesium-depe 99.5 3.8E-13 8.3E-18 112.4 10.7 52 226-278 111-164 (174)
79 TIGR01487 SPP-like sucrose-pho 99.5 1.3E-12 2.9E-17 113.4 13.9 57 30-88 1-58 (215)
80 PRK00192 mannosyl-3-phosphogly 99.5 2.4E-12 5.2E-17 115.9 15.9 59 28-88 2-61 (273)
81 TIGR02463 MPGP_rel mannosyl-3- 99.4 3.2E-13 7E-18 117.7 9.2 55 32-88 1-56 (221)
82 PHA02530 pseT polynucleotide k 99.4 7E-13 1.5E-17 120.9 11.5 48 226-274 251-299 (300)
83 TIGR01691 enolase-ppase 2,3-di 99.4 9.9E-13 2.1E-17 114.3 11.2 104 170-275 96-200 (220)
84 TIGR00099 Cof-subfamily Cof su 99.4 4.2E-12 9.1E-17 113.2 15.3 55 32-88 1-56 (256)
85 TIGR02461 osmo_MPG_phos mannos 99.4 1E-12 2.2E-17 115.0 10.7 55 32-88 1-55 (225)
86 TIGR01482 SPP-subfamily Sucros 99.4 1.3E-12 2.9E-17 113.9 10.2 54 33-88 1-55 (225)
87 PF08282 Hydrolase_3: haloacid 99.4 5.2E-12 1.1E-16 111.1 14.1 177 33-272 1-229 (254)
88 PLN02887 hydrolase family prot 99.4 3.8E-12 8.3E-17 124.6 14.3 59 28-88 306-365 (580)
89 TIGR01670 YrbI-phosphatas 3-de 99.4 3.6E-12 7.8E-17 104.9 10.6 47 226-274 75-121 (154)
90 TIGR00338 serB phosphoserine p 99.4 5.2E-12 1.1E-16 109.8 11.8 94 171-268 87-192 (219)
91 TIGR01493 HAD-SF-IA-v2 Haloaci 99.4 3.6E-13 7.9E-18 112.9 4.2 83 171-263 92-175 (175)
92 TIGR01486 HAD-SF-IIB-MPGP mann 99.4 1.1E-11 2.4E-16 110.6 13.9 55 32-88 1-56 (256)
93 TIGR01672 AphA HAD superfamily 99.4 2.4E-12 5.1E-17 112.9 9.3 103 169-279 114-219 (237)
94 PLN02954 phosphoserine phospha 99.4 6E-12 1.3E-16 109.8 11.5 100 171-275 86-199 (224)
95 TIGR02726 phenyl_P_delta pheny 99.4 3.9E-12 8.4E-17 106.0 9.6 44 226-270 81-124 (169)
96 PRK09484 3-deoxy-D-manno-octul 99.4 4.7E-12 1E-16 107.3 9.9 44 226-271 95-138 (183)
97 PF09419 PGP_phosphatase: Mito 99.3 8.1E-12 1.8E-16 103.1 10.7 48 226-275 116-168 (168)
98 TIGR01485 SPP_plant-cyano sucr 99.3 6.2E-11 1.3E-15 105.3 15.8 56 32-89 3-62 (249)
99 TIGR01681 HAD-SF-IIIC HAD-supe 99.3 6E-12 1.3E-16 100.3 8.3 41 31-71 1-54 (128)
100 TIGR02471 sucr_syn_bact_C sucr 99.3 4.9E-11 1.1E-15 105.0 12.5 54 32-88 1-54 (236)
101 PRK11133 serB phosphoserine ph 99.3 4.2E-11 9.1E-16 109.9 11.2 98 171-269 183-289 (322)
102 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.2 6.7E-11 1.4E-15 101.1 10.2 103 171-274 82-193 (201)
103 PTZ00174 phosphomannomutase; P 99.2 1.5E-10 3.3E-15 102.7 11.5 55 28-84 3-58 (247)
104 KOG3109 Haloacid dehalogenase- 99.2 5.7E-11 1.2E-15 100.0 7.8 98 172-274 103-208 (244)
105 PRK11009 aphA acid phosphatase 99.2 4.9E-10 1.1E-14 98.2 13.5 45 226-278 174-218 (237)
106 PRK14502 bifunctional mannosyl 99.1 1.9E-09 4.1E-14 106.0 17.6 60 27-88 413-473 (694)
107 TIGR01663 PNK-3'Pase polynucle 99.1 4.6E-10 1E-14 108.7 13.2 44 29-72 167-223 (526)
108 TIGR01484 HAD-SF-IIB HAD-super 99.1 1.4E-09 3E-14 93.5 14.5 53 32-86 1-55 (204)
109 PRK09552 mtnX 2-hydroxy-3-keto 99.1 2.3E-10 5E-15 99.7 9.0 97 170-267 75-183 (219)
110 PRK12702 mannosyl-3-phosphogly 99.1 5.2E-09 1.1E-13 93.4 16.3 57 30-88 1-58 (302)
111 PF08645 PNK3P: Polynucleotide 99.0 1.1E-09 2.3E-14 90.6 9.4 43 225-267 96-152 (159)
112 PRK10187 trehalose-6-phosphate 99.0 1.3E-08 2.7E-13 91.4 16.3 55 31-87 15-76 (266)
113 TIGR01686 FkbH FkbH-like domai 99.0 9E-10 2E-14 101.4 9.0 39 226-265 86-124 (320)
114 PTZ00445 p36-lilke protein; Pr 99.0 2.8E-09 6.2E-14 90.2 10.8 49 224-273 155-207 (219)
115 smart00577 CPDc catalytic doma 99.0 8.1E-10 1.8E-14 90.3 6.8 38 225-266 100-137 (148)
116 PLN02382 probable sucrose-phos 98.9 2.4E-08 5.3E-13 94.8 14.2 48 222-272 172-222 (413)
117 PRK13582 thrH phosphoserine ph 98.9 3.5E-09 7.5E-14 91.0 7.1 92 171-267 70-167 (205)
118 COG1778 Low specificity phosph 98.8 1.2E-08 2.5E-13 81.9 6.9 58 29-88 7-75 (170)
119 TIGR03333 salvage_mtnX 2-hydro 98.8 1.5E-08 3.3E-13 87.9 8.2 125 171-298 72-209 (214)
120 PF05116 S6PP: Sucrose-6F-phos 98.8 6.6E-09 1.4E-13 92.2 5.9 181 31-272 3-208 (247)
121 TIGR01489 DKMTPPase-SF 2,3-dik 98.8 3.6E-08 7.8E-13 83.2 9.2 89 171-266 74-184 (188)
122 PLN02423 phosphomannomutase 98.7 1.1E-07 2.3E-12 84.4 11.8 53 29-84 5-59 (245)
123 TIGR00685 T6PP trehalose-phosp 98.7 2E-07 4.4E-12 82.5 13.1 48 224-274 166-220 (244)
124 TIGR01488 HAD-SF-IB Haloacid D 98.7 3.3E-08 7.1E-13 82.7 6.8 92 171-263 75-177 (177)
125 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.7 2.9E-08 6.2E-13 85.1 5.9 99 170-269 88-196 (202)
126 TIGR02137 HSK-PSP phosphoserin 98.6 1.2E-07 2.5E-12 81.7 7.0 94 171-272 70-172 (203)
127 PF00702 Hydrolase: haloacid d 98.5 2.3E-07 4.9E-12 79.8 7.2 82 170-264 128-215 (215)
128 TIGR01533 lipo_e_P4 5'-nucleot 98.4 2.8E-06 6E-11 75.8 11.5 61 29-89 74-162 (266)
129 TIGR01684 viral_ppase viral ph 98.4 4.2E-07 9.1E-12 81.2 6.1 68 29-99 125-196 (301)
130 PLN02205 alpha,alpha-trehalose 98.4 5.7E-06 1.2E-10 85.2 14.3 54 29-84 595-653 (854)
131 PF12689 Acid_PPase: Acid Phos 98.4 2.1E-06 4.5E-11 71.3 8.4 48 230-278 111-158 (169)
132 PRK14501 putative bifunctional 98.3 6.4E-06 1.4E-10 84.1 13.0 56 29-86 491-553 (726)
133 COG4229 Predicted enolase-phos 98.3 7.5E-06 1.6E-10 67.4 9.5 101 169-272 103-205 (229)
134 COG0560 SerB Phosphoserine pho 98.2 3.5E-06 7.5E-11 73.0 7.5 98 171-269 79-185 (212)
135 TIGR01689 EcbF-BcbF capsule bi 98.2 4.2E-06 9E-11 66.1 6.6 45 31-77 2-53 (126)
136 PHA03398 viral phosphatase sup 98.1 3.9E-06 8.5E-11 75.1 6.1 68 29-99 127-198 (303)
137 PRK08238 hypothetical protein; 98.1 3.2E-05 6.9E-10 74.9 12.1 93 172-275 75-169 (479)
138 smart00775 LNS2 LNS2 domain. T 98.1 5.8E-06 1.3E-10 68.2 5.8 51 32-84 1-66 (157)
139 PLN02580 trehalose-phosphatase 98.1 0.00022 4.8E-09 66.7 16.1 54 31-87 120-179 (384)
140 PLN03017 trehalose-phosphatase 98.0 0.00022 4.7E-09 66.3 15.4 49 31-82 112-166 (366)
141 TIGR02244 HAD-IG-Ncltidse HAD 98.0 1.7E-05 3.7E-10 73.2 6.8 104 171-274 186-326 (343)
142 COG3769 Predicted hydrolase (H 97.9 0.00025 5.5E-09 60.4 11.9 58 29-88 6-63 (274)
143 KOG2961 Predicted hydrolase (H 97.9 0.00015 3.3E-09 58.1 9.5 107 167-279 60-175 (190)
144 PLN02151 trehalose-phosphatase 97.8 0.0012 2.6E-08 61.1 15.6 54 31-87 99-158 (354)
145 TIGR02251 HIF-SF_euk Dullard-l 97.8 1.9E-05 4.1E-10 65.5 3.2 39 232-271 101-139 (162)
146 TIGR01544 HAD-SF-IE haloacid d 97.7 0.00012 2.7E-09 65.5 7.9 91 171-263 123-230 (277)
147 PRK11590 hypothetical protein; 97.7 0.00018 4E-09 62.1 8.3 98 171-272 97-203 (211)
148 PF06437 ISN1: IMP-specific 5' 97.6 0.002 4.3E-08 59.4 13.7 55 29-83 146-204 (408)
149 KOG1615 Phosphoserine phosphat 97.4 0.00023 4.9E-09 59.5 5.1 88 172-262 91-191 (227)
150 TIGR01525 ATPase-IB_hvy heavy 97.4 0.00068 1.5E-08 67.3 9.0 90 167-273 382-473 (556)
151 TIGR01512 ATPase-IB2_Cd heavy 97.4 0.00082 1.8E-08 66.4 9.2 90 168-275 361-453 (536)
152 TIGR01675 plant-AP plant acid 97.3 0.00054 1.2E-08 59.7 6.6 59 29-89 76-164 (229)
153 PF03767 Acid_phosphat_B: HAD 97.2 0.00031 6.7E-09 61.6 3.7 61 29-89 71-159 (229)
154 TIGR01680 Veg_Stor_Prot vegeta 97.1 0.001 2.2E-08 59.2 6.0 61 29-89 100-189 (275)
155 PF08235 LNS2: LNS2 (Lipin/Ned 97.1 0.00099 2.1E-08 54.5 5.2 41 32-74 1-53 (157)
156 COG1877 OtsB Trehalose-6-phosp 97.1 0.047 1E-06 48.7 16.1 58 29-88 17-81 (266)
157 TIGR01511 ATPase-IB1_Cu copper 97.0 0.003 6.4E-08 62.8 9.0 89 169-275 405-494 (562)
158 TIGR01522 ATPase-IIA2_Ca golgi 97.0 0.011 2.5E-07 61.8 13.2 60 29-90 502-570 (884)
159 COG4087 Soluble P-type ATPase 96.9 0.022 4.8E-07 44.7 11.1 56 31-89 15-70 (152)
160 PRK10671 copA copper exporting 96.7 0.0083 1.8E-07 62.5 10.0 92 169-277 650-742 (834)
161 TIGR02468 sucrsPsyn_pln sucros 96.7 0.013 2.7E-07 61.5 11.0 50 221-273 952-1002(1050)
162 PF06888 Put_Phosphatase: Puta 96.7 0.027 6E-07 49.3 11.1 49 224-275 149-201 (234)
163 COG4359 Uncharacterized conser 96.6 0.013 2.8E-07 48.8 7.8 38 221-265 143-180 (220)
164 TIGR01545 YfhB_g-proteo haloac 96.4 0.0084 1.8E-07 51.8 6.3 99 170-271 95-201 (210)
165 PF02358 Trehalose_PPase: Treh 96.3 0.025 5.4E-07 49.6 9.0 43 231-274 169-219 (235)
166 PLN03063 alpha,alpha-trehalose 96.2 0.14 3.1E-06 53.0 15.2 60 30-91 507-576 (797)
167 COG3700 AphA Acid phosphatase 96.0 0.044 9.5E-07 45.4 8.0 34 244-278 185-218 (237)
168 COG2503 Predicted secreted aci 96.0 0.017 3.8E-07 50.1 6.0 66 29-94 78-172 (274)
169 TIGR01116 ATPase-IIA1_Ca sarco 96.0 0.081 1.8E-06 55.8 12.1 44 44-89 535-578 (917)
170 PF11019 DUF2608: Protein of u 95.8 0.082 1.8E-06 47.0 9.9 47 230-277 165-215 (252)
171 PF05152 DUF705: Protein of un 95.4 0.031 6.8E-07 49.8 5.4 69 29-100 121-193 (297)
172 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.3 0.046 1E-06 48.1 6.5 86 169-265 24-116 (242)
173 PLN03064 alpha,alpha-trehalose 95.2 0.26 5.7E-06 51.6 12.4 60 30-91 591-666 (934)
174 PF03031 NIF: NLI interacting 95.1 0.011 2.5E-07 48.4 1.7 52 31-83 1-73 (159)
175 PRK11033 zntA zinc/cadmium/mer 94.9 0.11 2.4E-06 53.4 8.8 88 169-275 568-656 (741)
176 PF12710 HAD: haloacid dehalog 94.9 0.024 5.3E-07 47.5 3.3 29 231-261 161-192 (192)
177 COG4030 Uncharacterized protei 94.9 0.91 2E-05 39.3 12.5 41 230-272 194-235 (315)
178 COG4996 Predicted phosphatase 94.8 0.064 1.4E-06 42.2 4.9 59 31-91 1-84 (164)
179 PF05761 5_nucleotid: 5' nucle 94.5 0.016 3.4E-07 55.7 1.1 44 232-275 284-328 (448)
180 TIGR01658 EYA-cons_domain eyes 93.7 0.11 2.5E-06 45.2 4.8 50 223-275 212-261 (274)
181 PF12710 HAD: haloacid dehalog 93.5 0.15 3.3E-06 42.5 5.3 21 172-192 92-113 (192)
182 TIGR02250 FCP1_euk FCP1-like p 93.5 0.13 2.9E-06 42.2 4.7 17 29-45 5-21 (156)
183 TIGR01511 ATPase-IB1_Cu copper 92.8 0.86 1.9E-05 45.4 10.3 100 29-140 384-488 (562)
184 COG5610 Predicted hydrolase (H 92.3 0.41 8.9E-06 45.5 6.7 47 226-272 157-203 (635)
185 TIGR01428 HAD_type_II 2-haloal 92.3 0.25 5.4E-06 41.8 5.0 53 44-99 90-142 (198)
186 TIGR01525 ATPase-IB_hvy heavy 92.3 1 2.2E-05 44.8 10.0 100 29-139 363-468 (556)
187 COG3882 FkbH Predicted enzyme 91.8 0.99 2.1E-05 43.3 8.6 38 226-264 310-347 (574)
188 COG2217 ZntA Cation transport 91.8 3 6.5E-05 42.7 12.6 110 32-154 519-641 (713)
189 KOG3120 Predicted haloacid deh 91.4 2.1 4.5E-05 37.0 9.3 38 239-277 178-216 (256)
190 COG2217 ZntA Cation transport 90.6 0.54 1.2E-05 47.9 6.1 89 169-273 537-627 (713)
191 TIGR02245 HAD_IIID1 HAD-superf 90.6 0.74 1.6E-05 39.2 6.0 57 29-88 20-84 (195)
192 COG4850 Uncharacterized conser 90.3 0.69 1.5E-05 42.1 5.8 58 32-89 163-241 (373)
193 KOG0207 Cation transport ATPas 90.3 7.3 0.00016 40.4 13.6 88 170-273 724-813 (951)
194 PLN02770 haloacid dehalogenase 90.2 0.51 1.1E-05 41.7 5.0 50 47-99 109-158 (248)
195 KOG3189 Phosphomannomutase [Li 90.2 0.54 1.2E-05 39.8 4.7 52 31-88 12-64 (252)
196 TIGR02253 CTE7 HAD superfamily 90.2 0.42 9E-06 41.0 4.3 50 46-98 94-143 (221)
197 PF13419 HAD_2: Haloacid dehal 90.0 0.39 8.4E-06 38.9 3.8 54 43-99 74-127 (176)
198 TIGR01647 ATPase-IIIA_H plasma 89.9 4 8.6E-05 42.3 11.8 48 39-88 435-482 (755)
199 PRK10517 magnesium-transportin 89.8 3.2 6.8E-05 43.9 11.1 43 44-88 548-590 (902)
200 TIGR01106 ATPase-IIC_X-K sodiu 89.8 3.8 8.3E-05 43.8 11.9 44 44-89 566-609 (997)
201 TIGR01517 ATPase-IIB_Ca plasma 89.5 4.7 0.0001 42.9 12.2 49 39-89 572-620 (941)
202 TIGR02252 DREG-2 REG-2-like, H 89.4 0.52 1.1E-05 39.9 4.3 49 46-98 105-153 (203)
203 PRK14988 GMP/IMP nucleotidase; 89.4 0.52 1.1E-05 41.0 4.3 50 47-99 94-143 (224)
204 PF00702 Hydrolase: haloacid d 89.1 1.2 2.5E-05 37.7 6.3 55 33-89 110-168 (215)
205 TIGR01512 ATPase-IB2_Cd heavy 89.1 1.7 3.6E-05 43.1 8.1 98 31-139 343-446 (536)
206 TIGR01524 ATPase-IIIB_Mg magne 89.0 4.1 8.9E-05 42.9 11.2 48 39-88 508-555 (867)
207 PF04312 DUF460: Protein of un 88.8 1.5 3.3E-05 34.8 6.0 56 32-88 45-102 (138)
208 TIGR01509 HAD-SF-IA-v3 haloaci 88.5 0.57 1.2E-05 38.6 3.8 50 45-98 84-133 (183)
209 KOG2961 Predicted hydrolase (H 88.3 2.6 5.6E-05 34.3 7.1 69 29-98 42-120 (190)
210 TIGR02247 HAD-1A3-hyp Epoxide 88.2 0.59 1.3E-05 39.9 3.8 53 45-98 93-145 (211)
211 PLN03243 haloacid dehalogenase 88.1 0.81 1.7E-05 40.8 4.7 50 47-99 110-159 (260)
212 KOG2116 Protein involved in pl 88.1 1 2.2E-05 44.7 5.6 72 29-100 529-616 (738)
213 PRK15122 magnesium-transportin 88.0 5.7 0.00012 42.0 11.6 43 44-88 548-590 (903)
214 TIGR02009 PGMB-YQAB-SF beta-ph 88.0 0.82 1.8E-05 37.9 4.5 49 45-98 87-135 (185)
215 PRK10826 2-deoxyglucose-6-phos 87.7 1 2.3E-05 38.7 5.1 50 46-98 92-141 (222)
216 TIGR01497 kdpB K+-transporting 87.7 4 8.8E-05 41.5 9.8 90 169-273 446-536 (675)
217 PRK13288 pyrophosphatase PpaX; 87.5 1 2.3E-05 38.5 4.9 48 47-97 83-130 (214)
218 KOG2134 Polynucleotide kinase 87.2 0.64 1.4E-05 43.3 3.5 81 29-109 74-182 (422)
219 TIGR01523 ATPase-IID_K-Na pota 86.9 6.3 0.00014 42.4 11.3 43 44-88 644-686 (1053)
220 COG0474 MgtA Cation transport 86.8 9.4 0.0002 40.5 12.3 45 44-90 545-589 (917)
221 TIGR03351 PhnX-like phosphonat 86.5 1.2 2.7E-05 38.1 4.9 51 46-99 87-139 (220)
222 PLN02645 phosphoglycolate phos 86.4 3.2 6.9E-05 38.0 7.7 88 170-269 45-136 (311)
223 KOG2630 Enolase-phosphatase E- 86.3 4.8 0.0001 35.0 8.1 101 169-272 123-225 (254)
224 PRK01122 potassium-transportin 85.6 8.7 0.00019 39.2 11.0 96 30-137 425-526 (679)
225 TIGR01454 AHBA_synth_RP 3-amin 85.5 1.4 3.1E-05 37.3 4.7 51 45-98 74-124 (205)
226 PRK14010 potassium-transportin 85.3 8.2 0.00018 39.3 10.6 96 30-137 421-522 (673)
227 TIGR01449 PGP_bact 2-phosphogl 84.8 1.8 3.8E-05 36.8 5.0 50 45-97 84-133 (213)
228 PRK11587 putative phosphatase; 84.6 1.9 4.1E-05 37.1 5.1 48 47-98 84-131 (218)
229 KOG2470 Similar to IMP-GMP spe 84.5 3.8 8.3E-05 37.8 7.0 100 172-272 243-376 (510)
230 TIGR01990 bPGM beta-phosphoglu 84.5 1.9 4.1E-05 35.7 4.9 49 46-99 87-135 (185)
231 COG0546 Gph Predicted phosphat 84.3 2.2 4.7E-05 36.9 5.4 49 46-97 89-137 (220)
232 TIGR01422 phosphonatase phosph 84.1 1.7 3.6E-05 38.3 4.6 51 46-98 99-149 (253)
233 TIGR01657 P-ATPase-V P-type AT 83.2 15 0.00032 39.7 11.9 49 39-89 649-697 (1054)
234 TIGR01497 kdpB K+-transporting 82.8 6 0.00013 40.3 8.4 100 29-140 425-530 (675)
235 PRK13226 phosphoglycolate phos 82.0 2.4 5.1E-05 36.8 4.7 42 47-90 96-137 (229)
236 COG5083 SMP2 Uncharacterized p 81.9 2.6 5.5E-05 40.1 4.9 63 29-91 374-452 (580)
237 PRK10671 copA copper exporting 81.4 9.7 0.00021 39.9 9.7 100 30-140 630-734 (834)
238 PRK09449 dUMP phosphatase; Pro 81.3 1.8 4E-05 37.1 3.7 48 47-98 96-143 (224)
239 PLN02575 haloacid dehalogenase 80.8 2.4 5.1E-05 40.1 4.4 50 47-99 217-266 (381)
240 KOG0207 Cation transport ATPas 80.6 12 0.00026 38.9 9.6 115 28-153 701-826 (951)
241 TIGR01672 AphA HAD superfamily 80.6 2.9 6.4E-05 36.7 4.8 59 32-90 65-160 (237)
242 PRK14010 potassium-transportin 80.2 13 0.00027 38.0 9.7 91 169-274 441-532 (673)
243 TIGR02254 YjjG/YfnB HAD superf 80.1 2.8 6E-05 35.8 4.4 51 45-99 96-146 (224)
244 COG0637 Predicted phosphatase/ 80.0 4.1 8.8E-05 35.3 5.5 52 46-100 86-137 (221)
245 TIGR01491 HAD-SF-IB-PSPlk HAD- 79.6 3.9 8.5E-05 34.2 5.1 40 47-88 81-120 (201)
246 PRK13222 phosphoglycolate phos 79.5 4.4 9.6E-05 34.6 5.5 47 47-96 94-140 (226)
247 PRK13225 phosphoglycolate phos 79.2 3.6 7.7E-05 37.0 5.0 43 47-91 143-185 (273)
248 TIGR01548 HAD-SF-IA-hyp1 haloa 78.7 4 8.6E-05 34.4 4.9 48 47-97 107-154 (197)
249 PLN02954 phosphoserine phospha 78.4 4.2 9.2E-05 34.8 5.1 40 47-88 85-124 (224)
250 PLN03190 aminophospholipid tra 78.2 79 0.0017 34.7 15.4 48 39-88 719-766 (1178)
251 PRK11033 zntA zinc/cadmium/mer 77.9 10 0.00022 39.3 8.3 97 29-139 547-649 (741)
252 PRK13478 phosphonoacetaldehyde 77.8 3.8 8.2E-05 36.4 4.7 40 47-88 102-141 (267)
253 TIGR01652 ATPase-Plipid phosph 77.3 22 0.00049 38.3 11.0 49 39-89 624-672 (1057)
254 TIGR01489 DKMTPPase-SF 2,3-dik 75.6 5.4 0.00012 32.9 4.8 43 45-89 71-113 (188)
255 TIGR01544 HAD-SF-IE haloacid d 74.8 7.1 0.00015 35.2 5.5 43 44-88 119-161 (277)
256 TIGR00338 serB phosphoserine p 74.4 6.6 0.00014 33.5 5.2 41 47-89 86-126 (219)
257 COG1011 Predicted hydrolase (H 74.3 4.2 9.2E-05 34.8 4.0 51 46-100 99-149 (229)
258 PRK13223 phosphoglycolate phos 74.2 5.5 0.00012 35.6 4.8 43 47-91 102-144 (272)
259 PRK06698 bifunctional 5'-methy 74.1 5.2 0.00011 38.8 4.9 49 47-98 331-379 (459)
260 PRK11009 aphA acid phosphatase 73.2 36 0.00077 29.9 9.5 28 168-195 113-141 (237)
261 PLN02940 riboflavin kinase 73.1 5.6 0.00012 37.6 4.7 50 47-99 94-144 (382)
262 KOG0206 P-type ATPase [General 72.5 21 0.00046 38.5 9.1 46 44-91 649-694 (1151)
263 PRK01122 potassium-transportin 71.6 35 0.00076 34.9 10.2 90 169-273 445-535 (679)
264 PF01740 STAS: STAS domain; I 71.6 5.5 0.00012 30.3 3.6 55 30-88 48-102 (117)
265 TIGR01664 DNA-3'-Pase DNA 3'-p 70.8 9.2 0.0002 31.5 5.0 25 171-195 44-69 (166)
266 KOG3107 Predicted haloacid deh 70.7 5.4 0.00012 37.2 3.7 81 187-273 373-453 (468)
267 TIGR01488 HAD-SF-IB Haloacid D 70.6 9.6 0.00021 31.1 5.1 40 47-88 74-113 (177)
268 PRK00208 thiG thiazole synthas 70.2 55 0.0012 29.0 9.8 50 225-278 160-211 (250)
269 TIGR02886 spore_II_AA anti-sig 69.9 16 0.00035 27.2 5.8 56 29-88 38-93 (106)
270 TIGR01452 PGP_euk phosphoglyco 69.4 23 0.00051 31.6 7.8 87 170-268 19-108 (279)
271 PLN02177 glycerol-3-phosphate 68.8 2.6 5.6E-05 41.3 1.5 20 30-49 22-41 (497)
272 COG0560 SerB Phosphoserine pho 68.6 9.3 0.0002 33.0 4.7 42 46-89 77-118 (212)
273 PF13344 Hydrolase_6: Haloacid 68.2 9.3 0.0002 28.7 4.1 83 170-265 15-100 (101)
274 cd07043 STAS_anti-anti-sigma_f 67.5 17 0.00037 26.2 5.5 55 30-88 38-92 (99)
275 COG0647 NagD Predicted sugar p 67.0 41 0.00089 30.2 8.6 29 170-198 25-54 (269)
276 PRK09456 ?-D-glucose-1-phospha 66.9 6 0.00013 33.4 3.2 29 46-74 84-112 (199)
277 TIGR01691 enolase-ppase 2,3-di 66.4 6.8 0.00015 34.0 3.4 29 46-74 95-123 (220)
278 TIGR01490 HAD-SF-IB-hyp1 HAD-s 66.4 11 0.00023 31.7 4.7 41 46-88 87-127 (202)
279 TIGR00377 ant_ant_sig anti-ant 65.8 21 0.00045 26.5 5.7 56 29-88 42-97 (108)
280 TIGR02137 HSK-PSP phosphoserin 65.5 13 0.00028 31.8 5.0 40 46-88 68-107 (203)
281 cd07041 STAS_RsbR_RsbS_like Su 65.1 16 0.00035 27.4 5.0 57 29-89 40-96 (109)
282 KOG4549 Magnesium-dependent ph 64.7 20 0.00044 28.2 5.3 57 31-88 19-85 (144)
283 PLN02811 hydrolase 64.3 8.6 0.00019 33.0 3.7 30 44-73 76-105 (220)
284 cd04728 ThiG Thiazole synthase 63.2 92 0.002 27.6 9.7 98 173-278 111-211 (248)
285 TIGR02244 HAD-IG-Ncltidse HAD 62.3 12 0.00026 34.9 4.4 28 47-74 185-212 (343)
286 PRK09552 mtnX 2-hydroxy-3-keto 62.2 15 0.00032 31.5 4.8 37 47-85 75-111 (219)
287 TIGR01549 HAD-SF-IA-v1 haloaci 62.0 11 0.00025 29.9 3.8 28 47-74 65-92 (154)
288 PLN02779 haloacid dehalogenase 61.5 13 0.00029 33.5 4.5 37 47-85 145-181 (286)
289 PLN02499 glycerol-3-phosphate 61.3 5.2 0.00011 38.9 1.9 21 29-49 7-27 (498)
290 KOG0202 Ca2+ transporting ATPa 60.5 75 0.0016 33.2 9.8 56 31-91 572-627 (972)
291 cd06844 STAS Sulphate Transpor 60.0 25 0.00054 25.9 5.1 56 29-88 38-93 (100)
292 PF06506 PrpR_N: Propionate ca 59.5 31 0.00067 28.6 6.1 96 169-278 61-157 (176)
293 PLN02919 haloacid dehalogenase 57.5 16 0.00034 39.5 4.9 49 48-98 163-211 (1057)
294 PRK05301 pyrroloquinoline quin 56.7 1E+02 0.0022 28.9 9.8 45 44-88 71-116 (378)
295 PRK13582 thrH phosphoserine ph 56.5 24 0.00052 29.5 5.1 39 47-88 69-107 (205)
296 KOG1615 Phosphoserine phosphat 56.3 25 0.00055 29.9 4.9 67 19-89 7-129 (227)
297 PRK10725 fructose-1-P/6-phosph 56.1 18 0.0004 29.8 4.2 49 46-99 88-136 (188)
298 COG0731 Fe-S oxidoreductases [ 56.0 32 0.00069 31.3 5.9 49 29-83 79-128 (296)
299 TIGR01993 Pyr-5-nucltdase pyri 55.1 11 0.00025 31.1 2.8 46 47-98 85-130 (184)
300 PRK11590 hypothetical protein; 53.8 28 0.0006 29.7 5.1 40 46-87 95-135 (211)
301 smart00775 LNS2 LNS2 domain. T 53.7 85 0.0018 25.5 7.7 26 170-195 28-54 (157)
302 PF06941 NT5C: 5' nucleotidase 53.4 6.3 0.00014 33.1 1.0 31 247-278 139-169 (191)
303 KOG2914 Predicted haloacid-hal 53.3 21 0.00046 31.0 4.2 35 41-75 87-121 (222)
304 PF06941 NT5C: 5' nucleotidase 53.2 11 0.00024 31.7 2.4 30 41-70 68-97 (191)
305 PRK10748 flavin mononucleotide 53.0 15 0.00032 32.1 3.3 42 48-98 115-156 (238)
306 TIGR02109 PQQ_syn_pqqE coenzym 52.5 1.2E+02 0.0027 28.0 9.6 41 48-88 67-107 (358)
307 TIGR03333 salvage_mtnX 2-hydro 51.4 29 0.00062 29.6 4.8 40 45-86 69-108 (214)
308 PRK04180 pyridoxal biosynthesi 50.8 1.9E+02 0.0042 26.2 11.2 49 226-278 189-241 (293)
309 TIGR02329 propionate_PrpR prop 50.8 1.5E+02 0.0032 29.5 10.1 91 169-273 81-172 (526)
310 PRK11133 serB phosphoserine ph 50.7 31 0.00067 31.8 5.1 40 47-88 182-221 (322)
311 PF09547 Spore_IV_A: Stage IV 50.5 29 0.00062 33.4 4.8 61 31-91 147-214 (492)
312 CHL00162 thiG thiamin biosynth 50.3 1.7E+02 0.0036 26.1 9.2 91 172-279 124-226 (267)
313 COG1366 SpoIIAA Anti-anti-sigm 50.3 46 0.001 25.3 5.4 57 29-89 43-99 (117)
314 TIGR01494 ATPase_P-type ATPase 49.9 84 0.0018 30.7 8.4 81 169-266 347-428 (499)
315 PRK00748 1-(5-phosphoribosyl)- 48.8 1.7E+02 0.0037 25.0 13.9 48 227-278 177-227 (233)
316 KOG0203 Na+/K+ ATPase, alpha s 46.7 1E+02 0.0023 32.2 8.3 39 49-89 593-631 (1019)
317 cd06591 GH31_xylosidase_XylS X 46.3 70 0.0015 29.3 6.8 71 17-87 22-105 (319)
318 COG2216 KdpB High-affinity K+ 46.2 1.1E+02 0.0024 30.3 8.0 89 39-137 440-528 (681)
319 COG5663 Uncharacterized conser 45.4 15 0.00032 30.5 1.9 29 33-61 9-37 (194)
320 TIGR01261 hisB_Nterm histidino 45.4 40 0.00087 27.5 4.5 24 171-194 31-55 (161)
321 COG4996 Predicted phosphatase 45.4 74 0.0016 25.4 5.6 71 171-253 43-126 (164)
322 TIGR01494 ATPase_P-type ATPase 43.2 50 0.0011 32.3 5.6 57 29-87 326-386 (499)
323 TIGR01545 YfhB_g-proteo haloac 43.1 50 0.0011 28.2 5.0 27 46-72 94-121 (210)
324 COG2433 Uncharacterized conser 43.1 69 0.0015 32.0 6.3 56 32-88 257-314 (652)
325 PF06189 5-nucleotidase: 5'-nu 42.8 55 0.0012 29.2 5.1 60 32-91 123-216 (264)
326 KOG2134 Polynucleotide kinase 42.6 74 0.0016 30.1 6.1 113 147-267 90-229 (422)
327 KOG3085 Predicted hydrolase (H 41.6 31 0.00067 30.3 3.4 63 32-100 101-163 (237)
328 PRK08238 hypothetical protein; 41.2 48 0.0011 32.4 5.1 39 47-87 73-111 (479)
329 PRK10563 6-phosphogluconate ph 40.7 42 0.0009 28.5 4.2 40 47-91 89-128 (221)
330 cd01766 Ufm1 Urm1-like ubiquit 40.5 36 0.00078 24.0 2.9 45 226-273 26-70 (82)
331 COG2241 CobL Precorrin-6B meth 40.4 2.4E+02 0.0053 24.3 10.1 72 226-311 100-176 (210)
332 KOG0210 P-type ATPase [Inorgan 39.8 45 0.00097 34.1 4.5 44 231-279 772-815 (1051)
333 COG1105 FruK Fructose-1-phosph 39.4 3.1E+02 0.0067 25.2 13.6 95 145-276 127-226 (310)
334 KOG0384 Chromodomain-helicase 39.1 1.2E+02 0.0025 33.2 7.5 46 53-98 690-735 (1373)
335 TIGR01662 HAD-SF-IIIA HAD-supe 39.0 56 0.0012 25.2 4.3 24 171-194 27-51 (132)
336 TIGR01681 HAD-SF-IIIC HAD-supe 38.4 38 0.00082 26.4 3.2 88 170-262 30-126 (128)
337 COG2503 Predicted secreted aci 38.0 66 0.0014 28.5 4.8 77 171-259 124-208 (274)
338 COG2185 Sbm Methylmalonyl-CoA 37.8 55 0.0012 26.4 4.0 61 35-100 62-124 (143)
339 COG1058 CinA Predicted nucleot 36.7 75 0.0016 28.3 5.1 51 228-279 22-75 (255)
340 TIGR02495 NrdG2 anaerobic ribo 36.3 1.3E+02 0.0028 24.9 6.4 47 38-86 64-112 (191)
341 PRK13361 molybdenum cofactor b 36.1 1.7E+02 0.0037 26.9 7.7 39 49-88 76-116 (329)
342 cd06598 GH31_transferase_CtsZ 36.1 1.3E+02 0.0029 27.4 6.9 59 29-87 39-109 (317)
343 COG1834 N-Dimethylarginine dim 36.1 71 0.0015 28.6 4.8 85 173-263 39-147 (267)
344 COG2099 CobK Precorrin-6x redu 36.0 3.2E+02 0.0069 24.4 8.8 19 255-273 213-231 (257)
345 PF00532 Peripla_BP_1: Peripla 35.5 3.2E+02 0.0069 24.2 10.8 44 18-69 20-63 (279)
346 PRK11840 bifunctional sulfur c 35.5 3.6E+02 0.0079 24.9 9.8 50 226-279 235-286 (326)
347 PRK15424 propionate catabolism 35.1 3.5E+02 0.0075 27.0 10.0 91 169-273 91-182 (538)
348 cd07042 STAS_SulP_like_sulfate 34.7 77 0.0017 23.0 4.3 55 30-88 41-95 (107)
349 PRK02910 light-independent pro 34.6 4.2E+02 0.0091 26.2 10.5 68 240-310 290-369 (519)
350 TIGR00213 GmhB_yaeD D,D-heptos 34.5 32 0.0007 28.3 2.4 25 171-195 28-53 (176)
351 PF05690 ThiG: Thiazole biosyn 34.5 2.2E+02 0.0047 25.1 7.4 93 172-279 110-212 (247)
352 PRK06769 hypothetical protein; 34.0 32 0.0007 28.3 2.3 25 171-195 30-55 (173)
353 PHA03398 viral phosphatase sup 33.7 1.4E+02 0.0029 27.4 6.3 73 171-279 150-228 (303)
354 KOG0208 Cation transport ATPas 33.6 1.5E+02 0.0032 31.7 7.2 50 39-90 698-747 (1140)
355 PF07287 DUF1446: Protein of u 32.8 1.6E+02 0.0034 27.7 6.8 75 172-274 58-132 (362)
356 TIGR01656 Histidinol-ppas hist 32.5 36 0.00078 27.1 2.3 25 171-195 29-54 (147)
357 PF06014 DUF910: Bacterial pro 32.4 30 0.00065 23.6 1.5 25 232-261 7-31 (62)
358 PF07075 DUF1343: Protein of u 32.1 46 0.00099 31.3 3.1 48 20-69 71-118 (365)
359 COG4161 ArtP ABC-type arginine 31.3 60 0.0013 27.0 3.3 42 27-69 157-198 (242)
360 PHA02597 30.2 hypothetical pro 30.4 87 0.0019 26.0 4.4 25 47-72 75-99 (197)
361 COG0548 ArgB Acetylglutamate k 30.2 1.3E+02 0.0029 26.9 5.6 62 30-94 2-63 (265)
362 cd06595 GH31_xylosidase_XylS-l 30.2 1.1E+02 0.0024 27.6 5.3 55 18-72 24-97 (292)
363 KOG4549 Magnesium-dependent ph 29.7 1.1E+02 0.0025 24.1 4.4 22 171-192 46-68 (144)
364 PLN02588 glycerol-3-phosphate 29.6 34 0.00074 33.5 1.9 20 30-49 50-69 (525)
365 COG0378 HypB Ni2+-binding GTPa 29.5 71 0.0015 27.3 3.6 70 221-298 21-92 (202)
366 COG0602 NrdG Organic radical a 29.3 63 0.0014 27.8 3.4 58 16-75 53-112 (212)
367 PRK11660 putative transporter; 29.3 1.2E+02 0.0027 30.2 5.9 72 29-105 490-562 (568)
368 PF12694 MoCo_carrier: Putativ 28.9 62 0.0013 26.1 2.9 35 34-68 61-96 (145)
369 cd01840 SGNH_hydrolase_yrhL_li 28.5 64 0.0014 25.7 3.1 31 245-275 1-31 (150)
370 PF06117 DUF957: Enterobacteri 28.5 29 0.00062 23.6 0.8 29 31-59 25-53 (65)
371 KOG2469 IMP-GMP specific 5'-nu 28.1 50 0.0011 31.3 2.7 38 27-64 24-64 (424)
372 KOG2882 p-Nitrophenyl phosphat 27.9 4.7E+02 0.01 23.9 8.7 103 146-272 27-133 (306)
373 KOG2470 Similar to IMP-GMP spe 27.6 60 0.0013 30.3 3.0 24 50-73 244-267 (510)
374 PF14528 LAGLIDADG_3: LAGLIDAD 27.5 14 0.0003 25.9 -0.9 42 34-89 7-48 (77)
375 COG3876 Uncharacterized protei 27.3 74 0.0016 29.2 3.4 113 22-142 118-238 (409)
376 TIGR00632 vsr DNA mismatch end 27.0 92 0.002 24.2 3.5 16 29-45 55-70 (117)
377 cd06592 GH31_glucosidase_KIAA1 26.9 1.7E+02 0.0037 26.5 6.0 44 29-72 45-93 (303)
378 cd06603 GH31_GANC_GANAB_alpha 26.6 1.8E+02 0.0039 26.8 6.2 71 17-87 22-105 (339)
379 PF05761 5_nucleotid: 5' nucle 26.6 51 0.0011 32.0 2.5 34 49-82 186-220 (448)
380 COG4229 Predicted enolase-phos 26.4 89 0.0019 26.4 3.5 55 20-74 69-131 (229)
381 TIGR01684 viral_ppase viral ph 26.3 2.2E+02 0.0048 26.0 6.3 25 171-195 148-173 (301)
382 PRK00075 cbiD cobalt-precorrin 25.9 3.2E+02 0.0069 25.7 7.5 42 231-272 212-253 (361)
383 COG2897 SseA Rhodanese-related 25.6 1.2E+02 0.0026 27.5 4.5 48 226-274 72-125 (285)
384 COG3785 Uncharacterized conser 25.5 46 0.001 25.1 1.6 42 29-70 27-68 (116)
385 PRK10444 UMP phosphatase; Prov 24.8 1.2E+02 0.0026 26.7 4.4 25 171-195 19-44 (248)
386 COG2896 MoaA Molybdenum cofact 24.7 4.1E+02 0.0089 24.6 7.9 122 37-188 60-183 (322)
387 PRK13762 tRNA-modifying enzyme 24.6 2.3E+02 0.0051 26.0 6.4 33 48-82 144-176 (322)
388 PF03671 Ufm1: Ubiquitin fold 24.3 18 0.0004 25.3 -0.7 38 226-264 26-63 (76)
389 COG4087 Soluble P-type ATPase 24.2 3.1E+02 0.0067 22.0 6.0 112 170-297 31-143 (152)
390 PF08353 DUF1727: Domain of un 23.9 1.8E+02 0.004 22.3 4.7 35 55-91 46-80 (113)
391 cd06301 PBP1_rhizopine_binding 23.7 4.6E+02 0.01 22.4 11.4 22 231-252 197-218 (272)
392 cd06831 PLPDE_III_ODC_like_AZI 23.6 3.7E+02 0.008 25.5 7.7 56 211-270 52-108 (394)
393 PRK08942 D,D-heptose 1,7-bisph 23.1 65 0.0014 26.5 2.3 25 171-195 31-56 (181)
394 KOG0256 1-aminocyclopropane-1- 22.9 2.8E+02 0.006 26.7 6.4 94 168-272 207-314 (471)
395 PF04413 Glycos_transf_N: 3-De 22.8 1.5E+02 0.0033 24.8 4.4 81 172-258 105-185 (186)
396 PF12689 Acid_PPase: Acid Phos 22.7 1.6E+02 0.0035 24.4 4.5 22 171-192 47-69 (169)
397 PRK10834 vancomycin high tempe 22.7 3.9E+02 0.0085 23.5 7.1 118 146-271 43-168 (239)
398 PF03537 Glyco_hydro_114: Glyc 22.7 1.5E+02 0.0032 20.8 3.7 29 29-68 26-54 (74)
399 COG0263 ProB Glutamate 5-kinas 22.6 3.7E+02 0.0081 25.2 7.1 39 48-91 30-68 (369)
400 TIGR00815 sulP high affinity s 22.5 1.2E+02 0.0026 30.3 4.4 55 30-88 494-548 (563)
401 PF09269 DUF1967: Domain of un 22.4 87 0.0019 21.7 2.4 21 232-252 45-65 (69)
402 TIGR01460 HAD-SF-IIA Haloacid 22.1 1.9E+02 0.0042 25.0 5.2 83 171-266 16-102 (236)
403 KOG0209 P-type ATPase [Inorgan 22.0 3.7E+02 0.0081 28.5 7.5 48 39-88 668-715 (1160)
404 TIGR01685 MDP-1 magnesium-depe 21.9 81 0.0018 26.2 2.6 23 171-193 47-70 (174)
405 TIGR02666 moaA molybdenum cofa 21.8 3E+02 0.0064 25.2 6.6 39 49-88 74-114 (334)
406 PLN02282 phosphoglycerate kina 21.8 2.5E+02 0.0054 26.9 6.0 57 39-96 34-99 (401)
407 cd00885 cinA Competence-damage 21.7 2.3E+02 0.005 23.3 5.3 47 231-278 23-72 (170)
408 cd01037 Restriction_endonuclea 21.6 1.4E+02 0.003 19.7 3.5 39 31-69 38-79 (80)
409 PRK03670 competence damage-ind 21.6 1.8E+02 0.004 25.7 4.9 48 231-279 24-75 (252)
410 TIGR00343 pyridoxal 5'-phospha 21.5 1.8E+02 0.0039 26.3 4.8 48 227-278 184-235 (287)
411 TIGR01668 YqeG_hyp_ppase HAD s 21.3 99 0.0021 25.3 3.0 25 170-194 44-69 (170)
412 PRK10076 pyruvate formate lyas 21.1 1.3E+02 0.0028 25.9 3.7 45 36-80 38-85 (213)
413 cd01445 TST_Repeats Thiosulfat 20.9 3.6E+02 0.0078 21.2 6.1 49 226-274 77-132 (138)
414 KOG1605 TFIIF-interacting CTD 20.8 52 0.0011 29.4 1.3 18 29-46 88-105 (262)
415 PLN02591 tryptophan synthase 20.7 3.7E+02 0.008 23.8 6.6 104 167-274 113-221 (250)
416 TIGR03595 Obg_CgtA_exten Obg f 20.5 1.2E+02 0.0027 20.9 2.9 21 232-252 45-65 (69)
417 TIGR01458 HAD-SF-IIA-hyp3 HAD- 20.4 1.9E+02 0.0042 25.4 4.9 25 171-195 23-48 (257)
418 PRK05446 imidazole glycerol-ph 20.2 2E+02 0.0043 27.0 5.0 23 171-193 32-55 (354)
419 cd04727 pdxS PdxS is a subunit 20.1 2.6E+02 0.0057 25.3 5.5 49 226-278 180-232 (283)
420 TIGR01456 CECR5 HAD-superfamil 20.1 2.8E+02 0.006 25.3 6.0 83 171-268 18-108 (321)
No 1
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-44 Score=318.05 Aligned_cols=253 Identities=29% Similarity=0.519 Sum_probs=220.4
Q ss_pred HHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHHh-CCCCCcccccccchH
Q 021350 22 RHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKS-LGFDPSLFAGAITSG 99 (313)
Q Consensus 22 ~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~~~l~~-~G~~~~~~~~ii~~~ 99 (313)
.++++ +|++++||+||||+++.+++|++.++|++|+++|++++++||+++.. +.+.++|++ +|++... +.|++|+
T Consensus 2 ~~~~~--~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~-~~i~TS~ 78 (269)
T COG0647 2 FDVMD--KYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTP-DDIVTSG 78 (269)
T ss_pred cchhh--hcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCH-HHeecHH
Confidence 34566 99999999999999999999999999999999999999999988665 559999999 5555655 9999999
Q ss_pred HHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCC--CCEEEecCCCCCCCCCCCCCCCCHHHHHHH
Q 021350 100 ELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEE--ADFILAHGTEGMGLPSGDVRPMSLQDLEKI 177 (313)
Q Consensus 100 ~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (313)
.++++|+.++.+ +++||+++.. .....+...|+.+..+.+. ++++++ |.|...+|+.+.++
T Consensus 79 ~at~~~l~~~~~------~~kv~viG~~-~l~~~l~~~G~~~~~~~~~~~~d~Vv~----------g~d~~~~~e~l~~a 141 (269)
T COG0647 79 DATADYLAKQKP------GKKVYVIGEE-GLKEELEGAGFELVDEEEPARVDAVVV----------GLDRTLTYEKLAEA 141 (269)
T ss_pred HHHHHHHHhhCC------CCEEEEECCc-chHHHHHhCCcEEeccCCCCcccEEEE----------ecCCCCCHHHHHHH
Confidence 999999999874 5788887643 3356899999988774444 366666 67899999999999
Q ss_pred HHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhh
Q 021350 178 LEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHD 256 (313)
Q Consensus 178 l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~D 256 (313)
+..+ ++|.+||+||+|..++.+.++.++.|.++.+++.+ +..+..+|||++.+|+.+++.++.++++|+||||++.+|
T Consensus 142 ~~~i-~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TD 220 (269)
T COG0647 142 LLAI-AAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTD 220 (269)
T ss_pred HHHH-HcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhh
Confidence 9765 56699999999999999999999999999999986 666779999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350 257 IKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312 (313)
Q Consensus 257 i~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~ 312 (313)
|.+|+++|+++++|+||.++.+++ .....+|+|+.+||+
T Consensus 221 I~~a~~~G~~t~LV~TGv~~~~~~-----------------~~~~~~p~~v~~sl~ 259 (269)
T COG0647 221 ILGAKAAGLDTLLVLTGVSSAEDL-----------------DRAEVKPTYVVDSLA 259 (269)
T ss_pred HHHHHHcCCCEEEEccCCCChhhh-----------------hhhccCCcchHhhHH
Confidence 999999999999999999988873 333679999999987
No 2
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-42 Score=300.32 Aligned_cols=263 Identities=20% Similarity=0.324 Sum_probs=223.5
Q ss_pred cchHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccc
Q 021350 19 NGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAIT 97 (313)
Q Consensus 19 ~~~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~ 97 (313)
+...+|++ +|++++||+||+||.+..++|++.++++.|++.|+.+.++||++ ++.+++.++++++|+..-..++|++
T Consensus 13 ~~~~e~l~--~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~s 90 (306)
T KOG2882|consen 13 EEARELLD--SFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFS 90 (306)
T ss_pred HHHHHHHh--hcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccC
Confidence 66888999 99999999999999999999999999999999999999999977 4567999999999999334499999
Q ss_pred hHHHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCC-------------------CCCCEEEecCCCC
Q 021350 98 SGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV-------------------EEADFILAHGTEG 158 (313)
Q Consensus 98 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~-------------------~~~~~~~~~~~~~ 158 (313)
|+.+++.||+++... ++++|+++.. .....+++.|++..... .++.+|++
T Consensus 91 sa~~~a~ylk~~~~~-----~k~Vyvig~~-gi~~eL~~aG~~~~g~~~~~~~~~~~~~~~~~~~~d~~VgAVvv----- 159 (306)
T KOG2882|consen 91 SAYAIADYLKKRKPF-----GKKVYVIGEE-GIREELDEAGFEYFGGGPDGKDTDGAKSFVLSIGLDPDVGAVVV----- 159 (306)
T ss_pred hHHHHHHHHHHhCcC-----CCeEEEecch-hhhHHHHHcCceeecCCCCcccccccccchhhcCCCCCCCEEEE-----
Confidence 999999999887611 6777776532 23457888887653210 11234444
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhCCCcEEEEcCCcccc-ccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHH
Q 021350 159 MGLPSGDVRPMSLQDLEKILEICASKKIPMVVANPDYVTV-EARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAM 236 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~i~tn~d~~~~-~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~ 236 (313)
|+|.+++|.++.+++.+|+..+..|++||.|..++ ......++.|.+++.++. +++++.++|||++.+++.+.
T Consensus 160 -----g~D~hfsy~KL~kA~~yLqnP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~ 234 (306)
T KOG2882|consen 160 -----GYDEHFSYPKLMKALNYLQNPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLL 234 (306)
T ss_pred -----ecccccCHHHHHHHHHHhCCCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHH
Confidence 78999999999999999998899999999999777 566678899999988886 69999999999999999999
Q ss_pred HHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350 237 AMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312 (313)
Q Consensus 237 ~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~ 312 (313)
++++++|++|+||||++.+||..|+++|++|++|+||.++.++. +.+..+..+.|||++++|+
T Consensus 235 ~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~-------------~~~~~~~~~~PDyy~~~l~ 297 (306)
T KOG2882|consen 235 EKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDI-------------LEAQGDNKMVPDYYADSLG 297 (306)
T ss_pred HHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHH-------------HhcccccCCCCchHHhhHH
Confidence 99999999999999999999999999999999999999988873 2333466789999998874
No 3
>PRK10444 UMP phosphatase; Provisional
Probab=100.00 E-value=2e-39 Score=286.91 Aligned_cols=241 Identities=22% Similarity=0.372 Sum_probs=207.6
Q ss_pred ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCC-CchHHHHHHHhCCCCCcccccccchHHHHHHHHHh
Q 021350 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSR-RASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR 108 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~-~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~ 108 (313)
+++|+||+|||||++.+++|++.+++++|+++|++++++||++. +..++.++|+.+|++... +++++|+.++++||++
T Consensus 1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~-~~i~ts~~~~~~~L~~ 79 (248)
T PRK10444 1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD-SVFYTSAMATADFLRR 79 (248)
T ss_pred CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCH-hhEecHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999999775 467999999999999887 9999999999999998
Q ss_pred cCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 021350 109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM 188 (313)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~ 188 (313)
+. +.++|+++.. .....+.+.|+++.. ++++++++ +.+.+++|+.+..++..+ ++|.++
T Consensus 80 ~~-------~~~v~~~g~~-~l~~~l~~~g~~~~~--~~~~~Vvv----------g~~~~~~~~~l~~a~~~l-~~g~~~ 138 (248)
T PRK10444 80 QE-------GKKAYVIGEG-ALIHELYKAGFTITD--INPDFVIV----------GETRSYNWDMMHKAAYFV-ANGARF 138 (248)
T ss_pred CC-------CCEEEEEcCH-HHHHHHHHCcCEecC--CCCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCCEE
Confidence 75 5677776542 334577788887654 56788877 446789999999998776 579999
Q ss_pred EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350 189 VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS 267 (313)
Q Consensus 189 i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~ 267 (313)
+++|+|...+ .+.++.|.+.+.++. .+.++...|||+|.+|+.+++++++++++|+||||++.+||.+|+++|+++
T Consensus 139 i~~n~D~~~~---g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~ 215 (248)
T PRK10444 139 IATNPDTHGR---GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLET 215 (248)
T ss_pred EEECCCCCCC---CCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCE
Confidence 9999999544 457888999998887 477788899999999999999999999999999999889999999999999
Q ss_pred EEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350 268 VFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312 (313)
Q Consensus 268 i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~ 312 (313)
++|+||.++.++ +.+....|+|+++||.
T Consensus 216 vlV~~G~~~~~~-----------------l~~~~~~pd~~~~sl~ 243 (248)
T PRK10444 216 ILVLSGVSTLDD-----------------IDSMPFRPSWIYPSVA 243 (248)
T ss_pred EEECCCCCCHHH-----------------HhcCCCCCCEEECCHH
Confidence 999999998766 3334578999999874
No 4
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=100.00 E-value=1.6e-38 Score=282.06 Aligned_cols=245 Identities=22% Similarity=0.334 Sum_probs=210.8
Q ss_pred ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHHHh
Q 021350 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLR 108 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~ 108 (313)
||+++||+|||||++.+.+|++.++|++|+++|++++++||++ |+.+.+.++++++|++... ++|++++.++++||++
T Consensus 1 ~~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~-~~iit~~~~~~~~l~~ 79 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATL-ETVFTASMATADYMND 79 (249)
T ss_pred CCEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh-hhEeeHHHHHHHHHHh
Confidence 6899999999999999999999999999999999999999855 7788999999999999877 9999999999999998
Q ss_pred cCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 021350 109 RDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM 188 (313)
Q Consensus 109 ~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~ 188 (313)
+.. ++++++++.. .....+.+.|+.+.. ++++.+++ +++..++|+.+..++..+ ++|.++
T Consensus 80 ~~~------~~~v~~lg~~-~l~~~l~~~g~~~~~--~~~~~Vvv----------g~~~~~~y~~l~~a~~~l-~~g~~~ 139 (249)
T TIGR01457 80 LKL------EKTVYVIGEE-GLKEAIKEAGYVEDK--EKPDYVVV----------GLDRQIDYEKFATATLAI-RKGAHF 139 (249)
T ss_pred cCC------CCEEEEEcCh-hHHHHHHHcCCEecC--CCCCEEEE----------eCCCCCCHHHHHHHHHHH-HCCCeE
Confidence 752 4666766543 335578888886654 56788877 345789999999999877 568899
Q ss_pred EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350 189 VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS 267 (313)
Q Consensus 189 i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~ 267 (313)
++||+|..++......++.|.+..+++. ++.++...|||+|.+|+.+++++++++++++||||++.+||.+|+++|+++
T Consensus 140 i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ 219 (249)
T TIGR01457 140 IGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDT 219 (249)
T ss_pred EEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcE
Confidence 9999999999777677889999999987 478888999999999999999999999999999999779999999999999
Q ss_pred EEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350 268 VFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312 (313)
Q Consensus 268 i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~ 312 (313)
++|.+|.++.++ +......|+|++++|.
T Consensus 220 v~v~~G~~~~~~-----------------~~~~~~~pd~~v~~l~ 247 (249)
T TIGR01457 220 LLVHTGVTKAEE-----------------VAGLPIAPTHVVSSLA 247 (249)
T ss_pred EEEcCCCCCHHH-----------------HhcCCCCCCEEeCChh
Confidence 999999987654 2223468999999875
No 5
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=100.00 E-value=1.4e-37 Score=280.75 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=207.7
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHHH
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLL 107 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~ 107 (313)
+|++|+||+|||||++.+.+|++.++|++|+++|+++.++||++ ++..++..+++++|++... +++++++.++++||+
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~-~~i~ts~~~~~~~l~ 79 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLA-EQLFSSALCAARLLR 79 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCh-hhEecHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999976 4567888999999999887 999999999999998
Q ss_pred hc-CchhhhhcCCeEEEeecCcccchhhccCCccccCCC------------------CCCCEEEecCCCCCCCCCCCCCC
Q 021350 108 RR-DDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENV------------------EEADFILAHGTEGMGLPSGDVRP 168 (313)
Q Consensus 108 ~~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 168 (313)
+. .. +.++|+++.. .....+++.|+.+.... ++++++++ +.+..
T Consensus 80 ~~~~~------~~~v~~iG~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv----------~~d~~ 142 (279)
T TIGR01452 80 QPPDA------PKAVYVIGEE-GLRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVV----------GYDEH 142 (279)
T ss_pred hhCcC------CCEEEEEcCH-HHHHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEE----------ecCCC
Confidence 84 21 4677776543 33457888888764321 24566666 45688
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCCccccccch-hccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350 169 MSLQDLEKILEICASKKIPMVVANPDYVTVEARA-LRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS 246 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~-~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~ 246 (313)
++|+++.++++.++++|..+++||++...+.... ..++.+.+...++. .+.++...|||+|..|+.+++++|++|++|
T Consensus 143 ~~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 143 FSYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence 9999999999999888887799999987764433 24566677666665 577888899999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH--hhcCCCCcEEecCCc
Q 021350 247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV--SKYDAYPSYVLPSFS 312 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~l~ 312 (313)
+||||++.+||.+|+++|+++++|+||.++.+++. ++. .+....|+|++++|+
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~-------------~~~~~~~~~~~Pd~~~~~l~ 277 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQ-------------EYLAAGQHDLVPDYVVESLA 277 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHH-------------hhhcccccCCCCCEEecccc
Confidence 99999977999999999999999999999776531 111 134578999999986
No 6
>PLN02645 phosphoglycolate phosphatase
Probab=100.00 E-value=2.4e-36 Score=276.47 Aligned_cols=263 Identities=19% Similarity=0.267 Sum_probs=209.9
Q ss_pred ccccchHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCccccc
Q 021350 16 QTLNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAG 94 (313)
Q Consensus 16 ~~~~~~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ 94 (313)
+...++.++++ +||+|+||+|||||++.+++|++.++|++|+++|++++++||++ ++.+++.++|+++|++... ++
T Consensus 16 ~~~~~~~~~~~--~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~-~~ 92 (311)
T PLN02645 16 LTLENADELID--SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTE-EE 92 (311)
T ss_pred CCHHHHHHHHH--hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCCh-hh
Confidence 45678999999 99999999999999999999999999999999999999999966 5567889999999999877 99
Q ss_pred ccchHHHHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCC------------------CCCCCEEEecCC
Q 021350 95 AITSGELTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN------------------VEEADFILAHGT 156 (313)
Q Consensus 95 ii~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~------------------~~~~~~~~~~~~ 156 (313)
|++++..+..++++.... -++++|+++. ......+++.|+..... .++.+++++
T Consensus 93 I~ts~~~~~~~l~~~~~~----~~~~V~viG~-~~~~~~l~~~Gi~~~~g~~~~~~~~~~~~~~~~~~~~~i~aVvv--- 164 (311)
T PLN02645 93 IFSSSFAAAAYLKSINFP----KDKKVYVIGE-EGILEELELAGFQYLGGPEDGDKKIELKPGFLMEHDKDVGAVVV--- 164 (311)
T ss_pred EeehHHHHHHHHHhhccC----CCCEEEEEcC-HHHHHHHHHCCCEEecCccccccccccccccccccCCCCCEEEE---
Confidence 999999999999875310 0345666553 23345677788765321 122245555
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHh-CCCcEEEEcCCccccccch-hccCCchHHHHHHH-hcCceeecCCCCHHHHH
Q 021350 157 EGMGLPSGDVRPMSLQDLEKILEICAS-KKIPMVVANPDYVTVEARA-LRVMPGTLASKFEK-LGGEVRWMGKPDKIIYK 233 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~~i~tn~d~~~~~~~~-~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~ 233 (313)
|.+..++|+.+..++..++. +|..+++||+|..++.... ..++.|.+...+.. .+.++..+|||+|.+|+
T Consensus 165 -------g~d~~~~~~~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~ 237 (311)
T PLN02645 165 -------GFDRYINYYKIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMD 237 (311)
T ss_pred -------ecCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHH
Confidence 56788999999999988764 6888999999987654333 45677777776665 56777889999999999
Q ss_pred HHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCC
Q 021350 234 SAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSF 311 (313)
Q Consensus 234 ~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l 311 (313)
.+++++++++++++||||++.+||.+|+++|+++++|+||.+..+++.. .+....|+|+++++
T Consensus 238 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~---------------~~~~~~pd~~~~~~ 300 (311)
T PLN02645 238 YLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLS---------------PENKIQPDFYTSKI 300 (311)
T ss_pred HHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHh---------------ccCCCCCCEEECCH
Confidence 9999999999999999999889999999999999999999987654210 01246788888776
No 7
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=100.00 E-value=6.6e-35 Score=259.98 Aligned_cols=239 Identities=19% Similarity=0.316 Sum_probs=193.9
Q ss_pred ccEEEEeccceeecCCc----cCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHhCCCCCcccccccchHHHHHH
Q 021350 30 FKAWLLDQFGVLHDGKK----PYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKSLGFDPSLFAGAITSGELTHQ 104 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~----~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~ 104 (313)
+++|+||+|||||++.+ ++|++.+++++|+++|++++++||++.. .+++.++++++|++... ++|++|+.++++
T Consensus 1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~-~~i~ts~~~~~~ 79 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISE-DEVFTPAPAARQ 79 (257)
T ss_pred CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCH-HHeEcHHHHHHH
Confidence 47999999999999888 9999999999999999999999997644 57899999999999877 999999999999
Q ss_pred HHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCC-CCCCHHHHHHHHHHHHh
Q 021350 105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDV-RPMSLQDLEKILEICAS 183 (313)
Q Consensus 105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~ 183 (313)
||++.. .++|+++... ....+. |+. .++++++++ |.+ ..++|+++.+++..+++
T Consensus 80 ~l~~~~--------~~~~~~g~~~-~~~~~~--~~~----~~~~~~Vv~----------g~~~~~~~y~~l~~a~~~L~~ 134 (257)
T TIGR01458 80 LLEEKQ--------LRPMLLVDDR-VLPDFD--GID----TSDPNCVVM----------GLAPEHFSYQILNQAFRLLLD 134 (257)
T ss_pred HHHhcC--------CCeEEEECcc-HHHHhc--cCC----CCCCCEEEE----------ecccCccCHHHHHHHHHHHHc
Confidence 998864 4566655432 222343 321 245676666 332 46889999999999988
Q ss_pred CCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHH
Q 021350 184 KKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN 261 (313)
Q Consensus 184 ~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~ 261 (313)
.+.++ ++||++..++......++.|.+...++. .+.++..+|||+|.+|+.++++++++|++|+||||++.+||.+|+
T Consensus 135 ~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~ 214 (257)
T TIGR01458 135 GAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQ 214 (257)
T ss_pred CCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHH
Confidence 88777 7889999888766667788888877776 477778899999999999999999999999999999779999999
Q ss_pred HcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCCCcEEecCC
Q 021350 262 AAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAYPSYVLPSF 311 (313)
Q Consensus 262 ~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l 311 (313)
++|+.+++|.||.++.++. ......|+|+++++
T Consensus 215 ~~G~~~i~v~~G~~~~~~~-----------------~~~~~~pd~~~~sl 247 (257)
T TIGR01458 215 DCGMRGIQVRTGKYRPSDE-----------------EKINVPPDLTCDSL 247 (257)
T ss_pred HcCCeEEEECCCCCChHHh-----------------cccCCCCCEEECCH
Confidence 9999999999998655431 11235678887775
No 8
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=100.00 E-value=5.7e-33 Score=245.74 Aligned_cols=241 Identities=28% Similarity=0.423 Sum_probs=192.6
Q ss_pred hHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350 21 LRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100 (313)
Q Consensus 21 ~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~ 100 (313)
++++++ +|++++||+||||+++.+++|++.++|++|+++|+++.++||++++..++.++++++|++.+.++.|+++..
T Consensus 1 ~~~~~~--~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~ 78 (242)
T TIGR01459 1 IFDLIN--DYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGE 78 (242)
T ss_pred Chhhhh--cCCEEEEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHH
Confidence 467888 999999999999999999999999999999999999999999887777778899999998723389999998
Q ss_pred HHHHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021350 101 LTHQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEI 180 (313)
Q Consensus 101 ~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 180 (313)
...+++..... ....-+.++++++........+...+.......++++++++.+. .+..++|+++.++++.
T Consensus 79 ~~~~~l~~~~~-~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~~~~~~~~~vvv~~~--------~~~~~~~~~~~~~l~~ 149 (242)
T TIGR01459 79 IAVQMILESKK-RFDIRNGIIYLLGHLENDIINLMQCYTTDDENKANASLITIYRS--------ENEKLDLDEFDELFAP 149 (242)
T ss_pred HHHHHHHhhhh-hccCCCceEEEeCCcccchhhhcCCCccccCCcccCcEEEEcCC--------CcccCCHHHHHHHHHH
Confidence 87777654210 00011356777766554455565555533332345666766432 1244789999999999
Q ss_pred HHhCCCcEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCC-CCcEEEEcCCchhhHHH
Q 021350 181 CASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVD-ACDSIAVGDSLHHDIKG 259 (313)
Q Consensus 181 l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~~v~IGDs~~~Di~~ 259 (313)
++++|+++++||++..++......++.|.+...++.++.++...|||+|..|+.++++++.. +++|+||||++.+||.+
T Consensus 150 l~~~g~~~i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~ 229 (242)
T TIGR01459 150 IVARKIPNICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILG 229 (242)
T ss_pred HHhCCCcEEEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHH
Confidence 88899999999999988876666778888888777777777789999999999999999874 68999999997799999
Q ss_pred HHHcCCcEEEEcC
Q 021350 260 ANAAGIQSVFIIG 272 (313)
Q Consensus 260 a~~aG~~~i~V~~ 272 (313)
|+++|+.+++|+|
T Consensus 230 a~~~G~~~i~v~t 242 (242)
T TIGR01459 230 ANRLGIDTALVLT 242 (242)
T ss_pred HHHCCCeEEEEeC
Confidence 9999999999986
No 9
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=100.00 E-value=1.1e-32 Score=253.21 Aligned_cols=243 Identities=23% Similarity=0.307 Sum_probs=187.8
Q ss_pred EEEEeccceeecCCccCccHHHHHHHHHHC----CCcEEEEeCCC-CCchHHHHHH-HhCCCCCcccccccchHHHHHHH
Q 021350 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATT----GAKMVVISNSS-RRASTTIDKL-KSLGFDPSLFAGAITSGELTHQY 105 (313)
Q Consensus 32 ~iifDlDGTL~~~~~~~~~a~~~l~~l~~~----g~~~~~~Tn~~-~~~~~~~~~l-~~~G~~~~~~~~ii~~~~~~~~~ 105 (313)
+++||||||||++.+++|++.++++.|+.. |+++.++||++ ++.++..+.+ +++|++... ++++++..++..+
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~-~~i~~s~~~~~~l 80 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSP-LQVIQSHSPYKSL 80 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCH-HHHHhhhHHHHHH
Confidence 689999999999999999999999999998 99999999965 5567778877 899999887 8999998877777
Q ss_pred HHhcCchhhhhcCCeEEEeecCcccchhhccCCccccC----------C-----------------------CCCCCEEE
Q 021350 106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVE----------N-----------------------VEEADFIL 152 (313)
Q Consensus 106 l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~----------~-----------------------~~~~~~~~ 152 (313)
+.+.. .++++++.+. ....+++.|++... + ..++++++
T Consensus 81 l~~~~--------~~v~viG~~~-~~~~l~~~G~~~vv~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVv 151 (321)
T TIGR01456 81 VNKYE--------KRILAVGTGS-VRGVAEGYGFQNVVHQDEIVRYFRDIDPFSGMSDEQVREYSRDIPDLTTKRFDAVL 151 (321)
T ss_pred HHHcC--------CceEEEeChH-HHHHHHHcCCcccccHHHHHhcCCCCCcccccCHHHhhcccccccccCCCceeEEE
Confidence 64432 3566655432 34567777776321 0 12345565
Q ss_pred ecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCC----------CcEEEEcCCccccccchh-ccCCchHHHHHHH----h
Q 021350 153 AHGTEGMGLPSGDVRPMSLQDLEKILEICASKK----------IPMVVANPDYVTVEARAL-RVMPGTLASKFEK----L 217 (313)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g----------~~~i~tn~d~~~~~~~~~-~~~~g~~~~~~~~----~ 217 (313)
+. .+....+.+++.++..+++.| .++++||+|..++...++ +++.|.+..+++. +
T Consensus 152 v~----------~d~~~~~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~ 221 (321)
T TIGR01456 152 VF----------NDPVDWAADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLEL 221 (321)
T ss_pred Ee----------cCchHHhhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHHHHHHHHHHHh
Confidence 52 234455667888887776532 688999999999977664 7889999888886 2
Q ss_pred -cCce--eecCCCCHHHHHHHHHHh--------CC-----CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccc
Q 021350 218 -GGEV--RWMGKPDKIIYKSAMAMV--------GV-----DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGL 281 (313)
Q Consensus 218 -~~~~--~~~gKP~~~~~~~~~~~l--------gv-----~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~ 281 (313)
+..+ ..+|||++.+|+.+++++ ++ ++++++||||++.+||.+|+++|+.+++|+||.++.++..
T Consensus 222 tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~ 301 (321)
T TIGR01456 222 NGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDL 301 (321)
T ss_pred cCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCC
Confidence 4432 678999999999999888 43 5589999999999999999999999999999988765421
Q ss_pred cCCCCccchhhHHHHHhhcCCCCcEEecCCc
Q 021350 282 DSYGEVADLSSVQTLVSKYDAYPSYVLPSFS 312 (313)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~ 312 (313)
....|+|++++|+
T Consensus 302 ------------------~~~~p~~vv~~l~ 314 (321)
T TIGR01456 302 ------------------KECKPTLIVNDVF 314 (321)
T ss_pred ------------------CCCCCCEEECCHH
Confidence 2357888888864
No 10
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=100.00 E-value=2.6e-32 Score=225.27 Aligned_cols=228 Identities=25% Similarity=0.395 Sum_probs=192.2
Q ss_pred hcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHHhCCCCCcccccccchHHHHHHH
Q 021350 27 TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLKSLGFDPSLFAGAITSGELTHQY 105 (313)
Q Consensus 27 ~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~ 105 (313)
++.++.+++|+-|||+.+...+|++.++++.|+.++.++.++||.+.. .+++.++|+++||++.. ++|++|..++.+|
T Consensus 4 ~~~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~e-eei~tsl~aa~~~ 82 (262)
T KOG3040|consen 4 GRAVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSE-EEIFTSLPAARQY 82 (262)
T ss_pred ccccceEEEeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccH-HHhcCccHHHHHH
Confidence 457899999999999999999999999999999999999999997755 47999999999999998 9999999999999
Q ss_pred HHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCC
Q 021350 106 LLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKK 185 (313)
Q Consensus 106 l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g 185 (313)
+.+..- .. |.+ ...+-...|. |+ . ..+|.+++..-. ...++|+.+..+++.+.+..
T Consensus 83 ~~~~~l------rP--~l~-v~d~a~~dF~--gi--d--Ts~pn~VVigla---------pe~F~y~~ln~AFrvL~e~~ 138 (262)
T KOG3040|consen 83 LEENQL------RP--YLI-VDDDALEDFD--GI--D--TSDPNCVVIGLA---------PEGFSYQRLNRAFRVLLEMK 138 (262)
T ss_pred HHhcCC------Cc--eEE-EcccchhhCC--Cc--c--CCCCCeEEEecC---------cccccHHHHHHHHHHHHcCC
Confidence 987641 11 211 1111111122 22 1 256777766221 37799999999999998876
Q ss_pred CcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHc
Q 021350 186 IPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA 263 (313)
Q Consensus 186 ~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~a 263 (313)
.+. |.-+..+.+.+..++++++|.+.+.+++ ++.+.+.+|||+|..|+.++..+|++|+++|||||++..|+.+|+++
T Consensus 139 k~~LIai~kgryykr~~Gl~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~ 218 (262)
T KOG3040|consen 139 KPLLIAIGKGRYYKRVDGLCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQAC 218 (262)
T ss_pred CCeEEEecCceeeeeccccccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhh
Confidence 554 7778888999999999999999999998 58999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCCCCcc
Q 021350 264 GIQSVFIIGGIHATEL 279 (313)
Q Consensus 264 G~~~i~V~~G~~~~~~ 279 (313)
||+.|+|.||++...+
T Consensus 219 GMrgilVkTGK~rpsD 234 (262)
T KOG3040|consen 219 GMRGILVKTGKFRPSD 234 (262)
T ss_pred cceeEEeeccccCCcc
Confidence 9999999999998865
No 11
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=100.00 E-value=9.6e-32 Score=236.87 Aligned_cols=223 Identities=32% Similarity=0.510 Sum_probs=182.5
Q ss_pred EEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHh-CCCCCcccccccchHHHHHHHHHhcC
Q 021350 33 WLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKS-LGFDPSLFAGAITSGELTHQYLLRRD 110 (313)
Q Consensus 33 iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~-~G~~~~~~~~ii~~~~~~~~~l~~~~ 110 (313)
++||+||||+++.+++|++.++++.++++|+++.++||++ ++.+++.++|.+ +|++... +++++|+.++++||+++.
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~-~~iits~~~~~~~l~~~~ 79 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSP-DQIITSGSVTKDLLRQRF 79 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCH-HHeeeHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999999999966 777899999998 8998877 999999999999999765
Q ss_pred chhhhhcCCeEEEeecCcccchhhccCCccc--cCCC------CCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021350 111 DAWFAALGRSCIHMTWSDRGAISLEGLGLKV--VENV------EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA 182 (313)
Q Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 182 (313)
. ++++++++.. .....++..|++. .++. +.++++++ +.+..++|..+..+...++
T Consensus 80 ~------~~~v~v~G~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~vv~----------~~~~~~~~~~~~~a~~~l~ 142 (236)
T TIGR01460 80 E------GEKVYVIGVG-ELRESLEGLGFRNDFFDDIDHLAIEKIPAAVIV----------GEPSDFSYDELAKAAYLLA 142 (236)
T ss_pred C------CCEEEEECCH-HHHHHHHHcCCcCcccCcccccccCCCCeEEEE----------CCCCCcCHHHHHHHHHHHh
Confidence 2 5667776543 3455788888752 1111 11345555 3457788998888887765
Q ss_pred hCCCcEEEEcCCccccccch-hccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcE-EEEcCCchhhHHH
Q 021350 183 SKKIPMVVANPDYVTVEARA-LRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDS-IAVGDSLHHDIKG 259 (313)
Q Consensus 183 ~~g~~~i~tn~d~~~~~~~~-~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~-v~IGDs~~~Di~~ 259 (313)
+.+.++++||+|..++.... ..++.|.+...++.. +..+...|||+|..|+.++++++++++++ +||||++.+||.+
T Consensus 143 ~~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~ 222 (236)
T TIGR01460 143 EGDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILG 222 (236)
T ss_pred CCCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHH
Confidence 43389999998875555443 677888888888875 66667899999999999999999999997 9999998789999
Q ss_pred HHHcCCcEEEEcCC
Q 021350 260 ANAAGIQSVFIIGG 273 (313)
Q Consensus 260 a~~aG~~~i~V~~G 273 (313)
|+++|+++++|+||
T Consensus 223 A~~~G~~~i~v~~G 236 (236)
T TIGR01460 223 AKNAGFDTLLVLTG 236 (236)
T ss_pred HHHCCCcEEEEecC
Confidence 99999999999987
No 12
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.82 E-value=1.4e-20 Score=167.07 Aligned_cols=101 Identities=22% Similarity=0.199 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|..|+++|+++ ++||......... +..-.+...|+. .+.+....+||+|+.|..++++++++|++|+
T Consensus 109 l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~---l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 109 PLNGLYKLKKWIEDRGLKRAAVTNAPRENAELM---ISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred cCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHH---HHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 3589999999999999998 8999765333221 111223444554 3555666789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
||||+. .|+++|+++|+.+|+|.+|.
T Consensus 186 ~vgDs~-~Di~aA~~aGi~~i~v~~g~ 211 (248)
T PLN02770 186 VFEDSV-SGIKAGVAAGMPVVGLTTRN 211 (248)
T ss_pred EEcCCH-HHHHHHHHCCCEEEEEeCCC
Confidence 999997 99999999999999999985
No 13
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.81 E-value=4.7e-20 Score=160.84 Aligned_cols=105 Identities=27% Similarity=0.348 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|..+++.|+++ ++||........- +....+...|... +.......||+|..+..+++++|++|++++
T Consensus 90 ~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~---l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 90 LFPGVKELLAALKSAGYKLGIVTNKPERELDIL---LKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHH---HHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 4689999999999999998 8998655322111 1112233344432 345567789999999999999999989999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
||||+. +||++|++||+++|+|++|+...+
T Consensus 167 ~VGDs~-~Di~aA~~Ag~~~v~v~~g~~~~~ 196 (220)
T COG0546 167 MVGDSL-NDILAAKAAGVPAVGVTWGYNSRE 196 (220)
T ss_pred EECCCH-HHHHHHHHcCCCEEEEECCCCCCc
Confidence 999996 999999999999999999986333
No 14
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.81 E-value=7.2e-20 Score=159.43 Aligned_cols=105 Identities=22% Similarity=0.323 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|+.|+++|+++ ++||......... +..-.+...++. ++......+||+|+.|..+++++|+++++|+
T Consensus 95 ~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~---l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 95 VYPGVRDTLMELRESGYRLGIITDGLPVKQWEK---LERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHH---HHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 3579999999999999988 8899765332221 222234455554 3555667789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHAT 277 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~ 277 (313)
||||++.+|+.+|+++|+++|+|.+|....
T Consensus 172 ~igDs~~~di~~A~~aG~~~i~~~~~~~~~ 201 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTVWINQGKSSK 201 (221)
T ss_pred EECCChHHHHHHHHHCCCEEEEECCCCCcc
Confidence 999997689999999999999999987643
No 15
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.80 E-value=9.6e-20 Score=158.11 Aligned_cols=106 Identities=21% Similarity=0.236 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++++.|+++|+++ ++||......... +..-.+...+.. .+.+....+||+|..|..++++++++|++|+
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~---l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMG---LKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 3589999999999999998 8898654222111 111123334443 2445556789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
||||+. +|+++|+++|+++++|.+|......
T Consensus 160 ~iGDs~-~Di~aa~~aG~~~i~v~~g~~~~~~ 190 (214)
T PRK13288 160 MVGDNH-HDILAGKNAGTKTAGVAWTIKGREY 190 (214)
T ss_pred EECCCH-HHHHHHHHCCCeEEEEcCCCCCHHH
Confidence 999997 9999999999999999999765543
No 16
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.80 E-value=9.1e-20 Score=160.01 Aligned_cols=104 Identities=23% Similarity=0.266 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
++++.++++.|+++|+++ ++||......... +..-.+...++. .+......+||+|+.|..+++++|++|++|+|
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~---l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~ 173 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYLARLI---LPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVY 173 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHHHHHH---HHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 578999999999999998 8898654222111 111122333343 24444567899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 249 VGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
|||+. +|+++|+++|+.+|+|.+|.....
T Consensus 174 IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~ 202 (229)
T PRK13226 174 VGDDE-RDILAARAAGMPSVAALWGYRLHD 202 (229)
T ss_pred eCCCH-HHHHHHHHCCCcEEEEeecCCCCC
Confidence 99996 999999999999999999986443
No 17
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.80 E-value=1.9e-19 Score=160.25 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=77.8
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHH-HH-hcCceeecCCCCHHHHHHHHHHhCCC-CCc
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKF-EK-LGGEVRWMGKPDKIIYKSAMAMVGVD-ACD 245 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~-~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~ 245 (313)
.++++.++|+.|+++|+++ ++||......... +..-.+...+ +. ++.+....+||+|+.|..+++++|+. |++
T Consensus 100 ~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~---l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 176 (253)
T TIGR01422 100 PIPGVIEVIAYLRARGIKIGSTTGYTREMMDVV---APEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA 176 (253)
T ss_pred cCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHH---HHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence 3589999999999999998 8888664322111 0000111221 22 24455567899999999999999995 999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
|+||||++ +|+++|+++|+.+|+|.+|..
T Consensus 177 ~l~IGDs~-~Di~aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 177 CVKVGDTV-PDIEEGRNAGMWTVGLILSSN 205 (253)
T ss_pred eEEECCcH-HHHHHHHHCCCeEEEEecCCc
Confidence 99999997 999999999999999999976
No 18
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.79 E-value=7e-19 Score=155.30 Aligned_cols=97 Identities=26% Similarity=0.258 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|..|+++ .++ ++||++... ..-.+...++. .+......+||+|++|..+++++|++|++|+
T Consensus 114 ~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~--------~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~ 184 (238)
T PRK10748 114 VPQATHDTLKQLAKK-WPLVAITNGNAQP--------ELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEIL 184 (238)
T ss_pred CCccHHHHHHHHHcC-CCEEEEECCCchH--------HHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEE
Confidence 357899999999765 666 889966531 11234556665 3556667889999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
||||++..|+.+|+++|+.+++|..+..
T Consensus 185 ~VGD~~~~Di~~A~~aG~~~i~v~~~~~ 212 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQACWINPENG 212 (238)
T ss_pred EEcCCcHHHHHHHHHCCCeEEEEcCCCc
Confidence 9999965999999999999999988654
No 19
>PRK11587 putative phosphatase; Provisional
Probab=99.79 E-value=8.2e-20 Score=159.07 Aligned_cols=100 Identities=20% Similarity=0.211 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|..|+++|+++ ++||.............+ + ..+.. .+.+....+||+|+.|..+++++|++|++|+
T Consensus 84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~---l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 84 ALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAG---L-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV 159 (218)
T ss_pred eCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcC---C-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence 3589999999999999999 889865432211100011 1 01111 2333445679999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
||||+. +|+++|+++|+.+|+|.+|.
T Consensus 160 ~igDs~-~di~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 160 VVEDAP-AGVLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred EEecch-hhhHHHHHCCCEEEEECCCC
Confidence 999996 99999999999999998765
No 20
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.79 E-value=3e-19 Score=160.32 Aligned_cols=102 Identities=13% Similarity=0.121 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHH-HHH-hcCceeecCCCCHHHHHHHHHHhCCC-CCc
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASK-FEK-LGGEVRWMGKPDKIIYKSAMAMVGVD-ACD 245 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~-~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~ 245 (313)
.++++.++|..|+++|+++ ++||......... +....+... ++. .+......+||+|+.|..+++++|++ +++
T Consensus 102 ~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~---l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e 178 (267)
T PRK13478 102 PIPGVLEVIAALRARGIKIGSTTGYTREMMDVV---VPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAA 178 (267)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHH---HHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence 3588999999999999998 8888655322110 000001111 122 24455567899999999999999996 799
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
|+||||++ +|+++|+++|+.+|+|.+|..
T Consensus 179 ~l~IGDs~-~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 179 CVKVDDTV-PGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred eEEEcCcH-HHHHHHHHCCCEEEEEccCcc
Confidence 99999997 999999999999999999876
No 21
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.79 E-value=8e-19 Score=158.88 Aligned_cols=109 Identities=21% Similarity=0.273 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
.++++.++|..++++|+++ ++||.................+...+..+++.....+||+|++|..+++++|++|++|+|
T Consensus 145 l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ 224 (286)
T PLN02779 145 LRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCVV 224 (286)
T ss_pred chhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEEE
Confidence 3689999999999999999 889865422211000000000111111223444557899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
|||+. +|+++|+++|+.+|+|.+|.+..+.
T Consensus 225 IGDs~-~Di~aA~~aG~~~i~v~~g~~~~~~ 254 (286)
T PLN02779 225 VEDSV-IGLQAAKAAGMRCIVTKSSYTADED 254 (286)
T ss_pred EeCCH-HhHHHHHHcCCEEEEEccCCccccc
Confidence 99997 9999999999999999998776544
No 22
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.78 E-value=5.4e-19 Score=153.93 Aligned_cols=106 Identities=21% Similarity=0.230 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHH--HHHHH-hcCceeecCCCCHHHHHHHHHHhCCC-CC
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLA--SKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVD-AC 244 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~--~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~ 244 (313)
.++++.+.++.++++|+++ ++||......... +..-.+. ..+.. .+......+||+|++|..+++++|++ |+
T Consensus 88 l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~---l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 164 (220)
T TIGR03351 88 ALPGAEEAFRSLRSSGIKVALTTGFDRDTAERL---LEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQ 164 (220)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHH---HHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChh
Confidence 3578999999999999998 8998665322211 1111122 23333 24445557899999999999999997 79
Q ss_pred cEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCCCcc
Q 021350 245 DSIAVGDSLHHDIKGANAAGIQS-VFIIGGIHATEL 279 (313)
Q Consensus 245 ~~v~IGDs~~~Di~~a~~aG~~~-i~V~~G~~~~~~ 279 (313)
+|+||||++ +|+++|+++|+.+ ++|.+|....+.
T Consensus 165 ~~~~igD~~-~Di~aa~~aG~~~~i~~~~g~~~~~~ 199 (220)
T TIGR03351 165 SVAVAGDTP-NDLEAGINAGAGAVVGVLTGAHDAEE 199 (220)
T ss_pred HeEEeCCCH-HHHHHHHHCCCCeEEEEecCCCcHHH
Confidence 999999997 9999999999999 999998765544
No 23
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=99.77 E-value=1.6e-17 Score=145.90 Aligned_cols=226 Identities=25% Similarity=0.347 Sum_probs=159.8
Q ss_pred cEEEEeccceeecCCccCccHHHHHHHHHHC----CCcEEEEeCCCCCchH-HHHHH-HhCCCCCcccccccchHHHHHH
Q 021350 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATT----GAKMVVISNSSRRAST-TIDKL-KSLGFDPSLFAGAITSGELTHQ 104 (313)
Q Consensus 31 k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~----g~~~~~~Tn~~~~~~~-~~~~l-~~~G~~~~~~~~ii~~~~~~~~ 104 (313)
=+|+||+||+|+.+..+++++.++++.|..+ .+|++++||.+...+. -++.+ ..+|++++. ++++.+......
T Consensus 36 fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~-dqviqSHsP~r~ 114 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSA-DQVIQSHSPFRL 114 (389)
T ss_pred eeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCH-HHHHhhcChHHH
Confidence 4799999999999999999999999999988 7999999998877653 35555 469999999 999998877665
Q ss_pred HHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCC--------------------------------CCCCCEEE
Q 021350 105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVEN--------------------------------VEEADFIL 152 (313)
Q Consensus 105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~--------------------------------~~~~~~~~ 152 (313)
....++ +.+.+.+ ....+...+.+||+-+.. ....++++
T Consensus 115 l~~~~~--------k~vLv~G-~~~vr~vAegyGFk~Vvt~D~l~k~f~~ldP~t~~~~~~k~~~~~R~~~~~r~ieAv~ 185 (389)
T KOG1618|consen 115 LVEYHY--------KRVLVVG-QGSVREVAEGYGFKNVVTVDELAKYFPLLDPFTDLSRELKTTKLARDRELFRRIEAVL 185 (389)
T ss_pred Hhhhhh--------ceEEEec-CCcHHHHhhccCccceeeHHHHHHhCCCcccccchhHhhhcccchhccccccceeEEE
Confidence 553333 2333333 222234556666552110 01123343
Q ss_pred ecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhC--------------CCcEEEEcCCccccccchh-ccCCchHHHHH---
Q 021350 153 AHGTEGMGLPSGDVRPMSLQDLEKILEICASK--------------KIPMVVANPDYVTVEARAL-RVMPGTLASKF--- 214 (313)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--------------g~~~i~tn~d~~~~~~~~~-~~~~g~~~~~~--- 214 (313)
+.+ |+.-...+++-+++.++.. .++++++|.|+.|+.+..+ +++.|.+.-++
T Consensus 186 ~~~----------dPv~W~~dlQli~D~l~snG~~gt~~~a~~~~Phipiy~sN~DLlW~~e~~lpR~G~GaF~l~lesi 255 (389)
T KOG1618|consen 186 LLG----------DPVRWETDLQLIMDVLLSNGSPGTGRLATGPYPHIPIYASNMDLLWMAEYKLPRFGHGAFRLCLESI 255 (389)
T ss_pred Eec----------CchhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCceEEecccccccccCCCccccchHHHHHHHHH
Confidence 322 1111123555555555442 2367899999999987764 67888776444
Q ss_pred -HHhcCc---eeecCCCCHHHHHHHHHHh--------CC-CCCcEEEEcCCchhhHHHHH---------------HcCCc
Q 021350 215 -EKLGGE---VRWMGKPDKIIYKSAMAMV--------GV-DACDSIAVGDSLHHDIKGAN---------------AAGIQ 266 (313)
Q Consensus 215 -~~~~~~---~~~~gKP~~~~~~~~~~~l--------gv-~~~~~v~IGDs~~~Di~~a~---------------~aG~~ 266 (313)
..+.++ .+.+|||++-.|++|...+ +. ++....||||++.+|+.+|+ .-||.
T Consensus 256 y~kltGk~L~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~ 335 (389)
T KOG1618|consen 256 YQKLTGKPLRYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWI 335 (389)
T ss_pred HHHhcCCcccccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCce
Confidence 445443 4679999999999886543 22 67889999999999999997 77899
Q ss_pred EEEEcCCCCC
Q 021350 267 SVFIIGGIHA 276 (313)
Q Consensus 267 ~i~V~~G~~~ 276 (313)
+|+|.||.++
T Consensus 336 SILV~TGV~~ 345 (389)
T KOG1618|consen 336 SILVRTGVYN 345 (389)
T ss_pred EEEEeeeeec
Confidence 9999999987
No 24
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.77 E-value=4.8e-19 Score=157.98 Aligned_cols=102 Identities=20% Similarity=0.288 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
++++.++|..|+++|+++ ++||......... +..-.+...++. ++......+||+|++|..+++++|++|++|+|
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~---l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~ 187 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYLERA---IEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIV 187 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHH---HHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEE
Confidence 589999999999999999 8999665322211 111224445554 35555667899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350 249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT 277 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~ 277 (313)
|||+. +|+++|+++|+.+|+|. |....
T Consensus 188 IgDs~-~Di~aA~~aG~~~i~v~-g~~~~ 214 (260)
T PLN03243 188 FGNSN-SSVEAAHDGCMKCVAVA-GKHPV 214 (260)
T ss_pred EcCCH-HHHHHHHHcCCEEEEEe-cCCch
Confidence 99996 99999999999999996 54433
No 25
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.77 E-value=6.9e-19 Score=153.52 Aligned_cols=102 Identities=26% Similarity=0.337 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
..+++.+.++.|+++++++ ++|+........ .+..-.+...|+. ..+....-+||+|+.|..++++||++|++|+
T Consensus 87 ~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~---~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 87 PIPGVVELLEQLKARGIPLAVASSSPRRAAER---VLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCccHHHHHHHHHhcCCcEEEecCChHHHHHH---HHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 3589999999999999998 566654321111 1222234445554 3556666779999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
+|+|+. ++|++|++|||.+|.|..+..
T Consensus 164 viEDs~-~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 164 VVEDSP-AGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred EEecch-hHHHHHHHCCCEEEEecCCCC
Confidence 999997 999999999999999998544
No 26
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=99.76 E-value=1.8e-18 Score=132.08 Aligned_cols=99 Identities=31% Similarity=0.470 Sum_probs=82.2
Q ss_pred EEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC-CCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhcCc
Q 021350 33 WLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS-RRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDD 111 (313)
Q Consensus 33 iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~-~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~~~ 111 (313)
|+||+|||||++.+++|++.++|++|++.|++++++||++ ++++++.++|+++|++... ++|++|+.++++||+++..
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~-~~i~ts~~~~~~~l~~~~~ 79 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE-DEIITSGMAAAEYLKEHKG 79 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G-GGEEEHHHHHHHHHHHHTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc-CEEEChHHHHHHHHHhcCC
Confidence 6899999999999999999999999999999999999977 4458999999999999988 9999999999999999543
Q ss_pred hhhhhcCCeEEEeecCcccchhhccCCc
Q 021350 112 AWFAALGRSCIHMTWSDRGAISLEGLGL 139 (313)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~l~~~g~ 139 (313)
++++|+++.. .....+++.|+
T Consensus 80 ------~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 80 ------GKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp ------SSEEEEES-H-HHHHHHHHTTE
T ss_pred ------CCEEEEEcCH-HHHHHHHHcCC
Confidence 7888877644 33557777776
No 27
>PRK06769 hypothetical protein; Validated
Probab=99.76 E-value=2e-17 Score=138.95 Aligned_cols=51 Identities=22% Similarity=0.309 Sum_probs=48.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350 225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA 276 (313)
Q Consensus 225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~ 276 (313)
.||+|+.|+.++++++++|++|+||||+. +|+.+|+++|+.+|+|.+|...
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCCCc
Confidence 49999999999999999999999999996 9999999999999999998754
No 28
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.76 E-value=1.1e-18 Score=150.96 Aligned_cols=106 Identities=27% Similarity=0.268 Sum_probs=81.6
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|+.++++|+++ ++||......... +....+...++. .+......+||+|+.|..+++++|++|++|+
T Consensus 86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~---l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 86 VFPGVEATLGALRAKGLRLGLVTNKPTPLARPL---LELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 3578999999999999988 8898755322211 111122333333 3445556789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
||||+. +|+++|+++|+.+++|.+|....+.
T Consensus 163 ~igDs~-~d~~aa~~aG~~~i~v~~g~~~~~~ 193 (213)
T TIGR01449 163 YVGDSR-VDIQAARAAGCPSVLLTYGYRYGEA 193 (213)
T ss_pred EeCCCH-HHHHHHHHCCCeEEEEccCCCCCcc
Confidence 999995 9999999999999999999875543
No 29
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.75 E-value=2.4e-17 Score=138.88 Aligned_cols=52 Identities=27% Similarity=0.367 Sum_probs=48.5
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcE-EEEcCCCCC
Q 021350 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQS-VFIIGGIHA 276 (313)
Q Consensus 224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~-i~V~~G~~~ 276 (313)
.+||+|++|..+++++|+++++|+||||+. +||++|+++|+.+ ++|.+|...
T Consensus 104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~g~~~ 156 (176)
T TIGR00213 104 CRKPKPGMLLQARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRTGKPI 156 (176)
T ss_pred CCCCCHHHHHHHHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEecCCcc
Confidence 459999999999999999999999999996 9999999999998 899998653
No 30
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.75 E-value=2.4e-18 Score=150.14 Aligned_cols=104 Identities=21% Similarity=0.320 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.+++..++++|+++ ++||......... +....+...++. .+......+||+|+.|..+++++|++|++|+
T Consensus 93 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~---l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 93 LLPGVREALALCKAQGLKIGLASASPLHMLEAV---LTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHH---HHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 4689999999999999998 8888655322211 111223344443 2445566899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHAT 277 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~ 277 (313)
||||+. +|+++|+++|+++|+|.++....
T Consensus 170 ~igDs~-~Di~aA~~aG~~~i~v~~~~~~~ 198 (222)
T PRK10826 170 ALEDSF-NGMIAAKAARMRSIVVPAPEQQN 198 (222)
T ss_pred EEcCCh-hhHHHHHHcCCEEEEecCCccCc
Confidence 999997 99999999999999999976544
No 31
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.74 E-value=2.9e-18 Score=158.94 Aligned_cols=101 Identities=20% Similarity=0.268 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|..|+++|+++ ++||......... +..-.+...|+. .+.+....+||+|++|..+++++|++|++|+
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~---L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENA---IGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 3589999999999999999 8998765322211 222234455555 3556666789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
||||+. +||++|+++|+.+|+|.++.
T Consensus 294 ~IGDS~-~DIeAAk~AGm~~IgV~~~~ 319 (381)
T PLN02575 294 VFGNSN-QTVEAAHDARMKCVAVASKH 319 (381)
T ss_pred EEcCCH-HHHHHHHHcCCEEEEECCCC
Confidence 999996 99999999999999998764
No 32
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.74 E-value=4.4e-18 Score=146.68 Aligned_cols=106 Identities=19% Similarity=0.247 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++++.|+++|+++ ++||......... +..-.+...++. .+......+||+|+.|+.+++++|++|++|+
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~---l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSL---LEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHH---HHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 3578999999999999988 8898654322211 111122333343 2444456789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
||||+. +|+++|+++|+++|+|.+|..+.++
T Consensus 153 ~igD~~-~Di~aA~~~Gi~~i~~~~g~~~~~~ 183 (205)
T TIGR01454 153 MVGDAV-TDLASARAAGTATVAALWGEGDAGE 183 (205)
T ss_pred EEcCCH-HHHHHHHHcCCeEEEEEecCCChhh
Confidence 999996 9999999999999999999876655
No 33
>PLN02940 riboflavin kinase
Probab=99.74 E-value=4.1e-18 Score=160.04 Aligned_cols=120 Identities=22% Similarity=0.335 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccC-CchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVM-PGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~-~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
++++.++|+.|+++|+++ ++||......... +. ...+...++. .+.+....+||+|++|..+++++|++|++|+
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~---l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l 171 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRANIEAK---ISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCL 171 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHH---HHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 588999999999999998 8999754322111 11 1223444444 3455566789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV 297 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~ 297 (313)
||||+. +|+++|+++|+++|+|.+|...... ...+...++++.++.
T Consensus 172 ~VGDs~-~Di~aA~~aGi~~I~v~~g~~~~~~---~~~ad~~i~sl~el~ 217 (382)
T PLN02940 172 VIEDSL-PGVMAGKAAGMEVIAVPSIPKQTHL---YSSADEVINSLLDLQ 217 (382)
T ss_pred EEeCCH-HHHHHHHHcCCEEEEECCCCcchhh---ccCccEEeCCHhHcC
Confidence 999997 9999999999999999998543322 123334455555553
No 34
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.73 E-value=6.7e-17 Score=136.73 Aligned_cols=53 Identities=34% Similarity=0.446 Sum_probs=49.2
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHAT 277 (313)
Q Consensus 224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~ 277 (313)
.+||+|..|..+++++|++|++|+||||+. +|+.+|+++|+.+++|.+|....
T Consensus 101 ~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~~g~~~~ 153 (181)
T PRK08942 101 CRKPKPGMLLSIAERLNIDLAGSPMVGDSL-RDLQAAAAAGVTPVLVRTGKGVT 153 (181)
T ss_pred CCCCCHHHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEEEcCCCCch
Confidence 349999999999999999999999999996 99999999999999999987643
No 35
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.73 E-value=3.2e-17 Score=143.39 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|..|+++|+++ ++||......... +..-.+...++. ++......+||+|+.|+.+++++|++|++|+
T Consensus 94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~---l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 94 LREDTVPFLEALKASGKRRILLTNAHPHNLAVK---LEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHH---HHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 3588999999999999998 8898654322211 111234445554 3445566789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCc-EEEEcCCCCCCcccccCCCCccchhhHHHHHhh
Q 021350 248 AVGDSLHHDIKGANAAGIQ-SVFIIGGIHATELGLDSYGEVADLSSVQTLVSK 299 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~-~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (313)
||||+. .|+++|+++|+. ++.|.++.+..+. ......++++++.+++..
T Consensus 171 ~igDs~-~di~aA~~aG~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 220 (224)
T PRK14988 171 FIDDSE-PILDAAAQFGIRYCLGVTNPDSGIAE--KQYQRHPSLNDYRRLIPS 220 (224)
T ss_pred EEcCCH-HHHHHHHHcCCeEEEEEeCCCCCccc--hhccCCCcHHHHHHHhhh
Confidence 999996 999999999997 4778887765544 233445677777776653
No 36
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.73 E-value=1.2e-17 Score=150.14 Aligned_cols=123 Identities=23% Similarity=0.268 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++++.++++|+++ ++||......... +..-.+...+.. .+.+....+||+|..|+.+++++|++|++|+
T Consensus 102 ~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~---l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 102 VYPGVRDTLKWLKKQGVEMALITNKPERFVAPL---LDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHH---HHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 3588999999999999888 8888654221110 111112233333 2344455689999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV 297 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~ 297 (313)
||||+. +|+++|+++|+.+++|.+|....+.+.. ..+...++++.+++
T Consensus 179 ~IGD~~-~Di~aA~~aGi~~i~v~~G~~~~~~l~~-~~~~~vi~~l~el~ 226 (272)
T PRK13223 179 FVGDSR-SDVLAAKAAGVQCVALSYGYNHGRPIAE-ESPALVIDDLRALL 226 (272)
T ss_pred EECCCH-HHHHHHHHCCCeEEEEecCCCCchhhhh-cCCCEEECCHHHHH
Confidence 999995 9999999999999999999876655321 23444445555543
No 37
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.72 E-value=1.2e-17 Score=145.80 Aligned_cols=106 Identities=28% Similarity=0.299 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.+.++.+++.|+++ ++||............+ .+...+.. .+.+....+||+|++|+.+++++++++++|+
T Consensus 94 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 94 LYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---GIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 3578999999999999888 88987653221111011 11222232 2444555789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
+|||+. +|+++|+++|+++++|.+|......
T Consensus 171 ~igD~~-~Di~~a~~~g~~~i~v~~g~~~~~~ 201 (226)
T PRK13222 171 FVGDSR-NDIQAARAAGCPSVGVTYGYNYGEP 201 (226)
T ss_pred EECCCH-HHHHHHHHCCCcEEEECcCCCCccc
Confidence 999996 9999999999999999998764443
No 38
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.72 E-value=2.4e-17 Score=141.31 Aligned_cols=100 Identities=18% Similarity=0.267 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
++++.++|+.|+++|+++ ++||.+....... +..-.+...++. ++.+.....||+|++|..+++++|++|++|+|
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~---l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPAMLKSL---VKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 578899999999999998 8999765332221 111124445554 35556677899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 249 VGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
|||+. +|+.+|+++|+.+|+|..+.
T Consensus 171 vgD~~-~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 171 VASNP-WDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred EeCCH-HHHHHHHHCCCcEEEecCCC
Confidence 99997 99999999999999998843
No 39
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.72 E-value=2.2e-17 Score=119.26 Aligned_cols=72 Identities=35% Similarity=0.623 Sum_probs=65.8
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCCC
Q 021350 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDAY 303 (313)
Q Consensus 224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (313)
+|||+|.+|..+++++++++++|+||||++.+||.+|+++|+.+|+|+||.++.++ +......
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~-----------------~~~~~~~ 64 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPED-----------------LEKAEHK 64 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCG-----------------HHHSSST
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHH-----------------HhccCCC
Confidence 68999999999999999999999999999669999999999999999999998876 3334579
Q ss_pred CcEEecCCc
Q 021350 304 PSYVLPSFS 312 (313)
Q Consensus 304 p~~~~~~l~ 312 (313)
|+||+++|.
T Consensus 65 pd~vv~~l~ 73 (75)
T PF13242_consen 65 PDYVVDDLK 73 (75)
T ss_dssp TSEEESSGG
T ss_pred CCEEECCHH
Confidence 999999984
No 40
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.71 E-value=4.3e-17 Score=140.19 Aligned_cols=95 Identities=25% Similarity=0.347 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
++++.++|..|+++|+++ ++||.+... .. .+....+...++. .+......+||+|+.|..+++++|++|++|+|
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~~--~~--~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSRL--RG--LLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchhH--HH--HHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 578999999999999988 899976522 11 1111233444544 34455677899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEE
Q 021350 249 VGDSLHHDIKGANAAGIQSVF 269 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~ 269 (313)
|||++.+||++|+++|+.+||
T Consensus 183 IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred ECCCchHHHHHHHHcCCeeeC
Confidence 999976899999999999985
No 41
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.71 E-value=2.4e-17 Score=143.68 Aligned_cols=117 Identities=21% Similarity=0.267 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHH-H-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFE-K-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
++++.+++..| ++++ ++||........ .+..-.+...|. . +.......+||+|++|..+++++|++|++|+
T Consensus 90 ~~gv~~~L~~L---~~~~~ivTn~~~~~~~~---~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 90 IAGANALLESI---TVPMCVVSNGPVSKMQH---SLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCCHHHHHHHc---CCCEEEEeCCcHHHHHH---HHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 46778888776 3677 889876432211 111123344443 2 2334456789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV 297 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~ 297 (313)
||||+. +||++|+++|+++|++.++....+. ..++...++++.++.
T Consensus 164 ~igDs~-~di~aA~~aG~~~i~~~~~~~~~~~---~~~~~~~~~~~~~l~ 209 (221)
T PRK10563 164 LVDDSS-AGAQSGIAAGMEVFYFCADPHNKPI---DHPLVTTFTDLAQLP 209 (221)
T ss_pred EEeCcH-hhHHHHHHCCCEEEEECCCCCCcch---hhhhhHHHHHHHHHH
Confidence 999997 9999999999999999876554321 123333455555543
No 42
>PRK09449 dUMP phosphatase; Provisional
Probab=99.70 E-value=1.5e-16 Score=138.94 Aligned_cols=100 Identities=26% Similarity=0.358 Sum_probs=76.2
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCC-CCcE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVD-ACDS 246 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~-~~~~ 246 (313)
.++++.++|+.|+ +++++ ++||........ .+..-.+...|+. ..+......||+|++|..+++++|+. +++|
T Consensus 96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~---~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 96 PLPGAVELLNALR-GKVKMGIITNGFTELQQV---RLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred cCccHHHHHHHHH-hCCeEEEEeCCcHHHHHH---HHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3588999999998 57887 889965432211 1222234455554 35566677899999999999999985 5899
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 247 IAVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
+||||+..+|+++|+++|+.++++.++
T Consensus 172 ~~vgD~~~~Di~~A~~aG~~~i~~~~~ 198 (224)
T PRK09449 172 LMVGDNLHSDILGGINAGIDTCWLNAH 198 (224)
T ss_pred EEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence 999999756999999999999999865
No 43
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.70 E-value=2.6e-17 Score=139.72 Aligned_cols=92 Identities=20% Similarity=0.266 Sum_probs=69.1
Q ss_pred HHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCC
Q 021350 175 EKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS 252 (313)
Q Consensus 175 ~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs 252 (313)
.+.|..++++ .++ ++||........ .+..-.+...++. .+.+....+||+|++|+.+++++|++|++|+||||+
T Consensus 93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~---~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs 168 (188)
T PRK10725 93 IEVVKAWHGR-RPMAVGTGSESAIAEA---LLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDA 168 (188)
T ss_pred HHHHHHHHhC-CCEEEEcCCchHHHHH---HHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEecc
Confidence 4677777654 677 788865432221 1222234455554 355566778999999999999999999999999999
Q ss_pred chhhHHHHHHcCCcEEEEc
Q 021350 253 LHHDIKGANAAGIQSVFII 271 (313)
Q Consensus 253 ~~~Di~~a~~aG~~~i~V~ 271 (313)
. +|+++|+++|+++|+|.
T Consensus 169 ~-~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 169 D-FGIQAARAAGMDAVDVR 186 (188)
T ss_pred H-hhHHHHHHCCCEEEeec
Confidence 5 99999999999999985
No 44
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.70 E-value=2.7e-16 Score=128.51 Aligned_cols=48 Identities=35% Similarity=0.612 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
.||+|++|+.+++++++++++|+||||+ ..|+++|+++|+++++|..|
T Consensus 100 ~KP~~~~~~~~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 RKPKPGLILEALKRLGVDASRSLVVGDR-LRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEcCC-HHHHHHHHHCCCCEEEecCC
Confidence 3999999999999999999999999999 59999999999999999865
No 45
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.70 E-value=2.2e-17 Score=139.70 Aligned_cols=96 Identities=21% Similarity=0.283 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|+.|+++|+++ ++||.... .. .+..-.+...++. ++......+||+|++|..++++++++|++|+
T Consensus 88 ~~pg~~~~L~~L~~~g~~~~i~s~~~~~---~~--~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 88 VLPGIKNLLDDLKKNNIKIALASASKNA---PT--VLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCccH---HH--HHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 3589999999999999998 78875321 11 1111233344444 3445556789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEc
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFII 271 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~ 271 (313)
||||+. +|+++|+++|+++|+|+
T Consensus 163 ~vgD~~-~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 163 GIEDAQ-AGIEAIKAAGMFAVGVG 185 (185)
T ss_pred EEecCH-HHHHHHHHcCCEEEecC
Confidence 999996 99999999999999884
No 46
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.70 E-value=2.3e-16 Score=126.45 Aligned_cols=46 Identities=26% Similarity=0.452 Sum_probs=42.9
Q ss_pred CCCHHHHHHHHHHh-CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350 226 KPDKIIYKSAMAMV-GVDACDSIAVGDSLHHDIKGANAAGIQSVFII 271 (313)
Q Consensus 226 KP~~~~~~~~~~~l-gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~ 271 (313)
||+|++|+.+++++ +++|++|+||||+..+|+.+|+++|+.+|+|.
T Consensus 85 KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 85 KPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 99999999999999 59999999999942599999999999999986
No 47
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.69 E-value=1.1e-16 Score=139.49 Aligned_cols=102 Identities=26% Similarity=0.372 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHh-CCCCCcEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMV-GVDACDSI 247 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~l-gv~~~~~v 247 (313)
++++.++++.++++ .++ ++||........ .+..-.+...++. ++.......||+|.+|..+++++ |++|++|+
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~---~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQYK---RLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHHHH---HHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 47889999999888 777 889865422211 1111233444554 35556677899999999999999 99999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHA 276 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~ 276 (313)
||||+..+|+++|+++|+++|++.+|...
T Consensus 175 ~igD~~~~di~~A~~~G~~~i~~~~~~~~ 203 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTCWMNPDMHP 203 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCCCCC
Confidence 99999647999999999999999987544
No 48
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.69 E-value=2e-16 Score=142.15 Aligned_cols=102 Identities=18% Similarity=0.255 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
++++.++|+.|+++|+++ ++||.......... ..-.+...++.. +.... +++++.|..++++++++|++|+|
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L---~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~p~~~l~ 217 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL---QRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQPAAVMY 217 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH---HHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcChhHEEE
Confidence 588999999999999999 88986653222111 001122222221 11111 34567999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 249 VGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
|||+. .|+++|+++|+.+|+|.+|....+.
T Consensus 218 IGDs~-~Di~aA~~AG~~~I~v~~g~~~~~~ 247 (273)
T PRK13225 218 VGDET-RDVEAARQVGLIAVAVTWGFNDRQS 247 (273)
T ss_pred ECCCH-HHHHHHHHCCCeEEEEecCCCCHHH
Confidence 99996 9999999999999999999776554
No 49
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.68 E-value=7.8e-17 Score=140.83 Aligned_cols=103 Identities=27% Similarity=0.364 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.+.|+.++++ +++ ++||+....+... +...++...|+. +.+...+..||+|.+|+.+++++|++|++|+
T Consensus 100 ~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~---l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 100 DYPEALEALKELGKK-YKLGILTNGARPHQERK---LRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred cChhHHHHHHHHHhh-ccEEEEeCCChHHHHHH---HHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 357888888888777 777 8999755433332 222226667776 4667777899999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHA 276 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~ 276 (313)
||||++.+||.+|+++|++++||..+...
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~ 204 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGGKP 204 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCCCC
Confidence 99999999999999999999999986553
No 50
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.68 E-value=2.7e-17 Score=139.16 Aligned_cols=95 Identities=22% Similarity=0.332 Sum_probs=73.0
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.+++..++++|+++ ++||... . .. .+..-.+...++. .+.......||+|++|..++++++++|++|+
T Consensus 89 ~~~g~~~~l~~l~~~g~~i~i~S~~~~--~-~~--~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 89 VLPGIENFLKRLKKKGIAVGLGSSSKN--A-DR--ILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCcCHHHHHHHHHHcCCeEEEEeCchh--H-HH--HHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 4689999999999999998 7787611 1 11 1111233344443 2444556789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEE
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFI 270 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V 270 (313)
||||+. .|+++|+++|+++|.|
T Consensus 164 ~IgD~~-~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 164 VFEDAL-AGVQAARAAGMFAVAV 185 (185)
T ss_pred EEeCcH-hhHHHHHHCCCeEeeC
Confidence 999996 9999999999999875
No 51
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.68 E-value=5.3e-16 Score=129.88 Aligned_cols=55 Identities=24% Similarity=0.396 Sum_probs=51.5
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCccc
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATELG 280 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~ 280 (313)
||+|.+|..+++++++++++|+||||++.+|+++|+++|+.+|+|.+|..+.+..
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~ 145 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF 145 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence 9999999999999999999999999997579999999999999999998877653
No 52
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.66 E-value=7.6e-16 Score=133.27 Aligned_cols=104 Identities=22% Similarity=0.344 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350 172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV 249 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I 249 (313)
++..+++..++++|..+ ++||-|...+. .+.+-.+...++. +.+...+.-||+|.+|+.+++++++.|++|++|
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~~----~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhI 191 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRLRL----LLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHI 191 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHHHH----HhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEe
Confidence 56669999999999666 88997775542 1223344466665 456667788999999999999999999999999
Q ss_pred cCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 250 GDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 250 GDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
||+++||+++|+++||++++|....+....
T Consensus 192 gD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 192 GDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred cCccccccHhHHHcCCEEEEEccccchhhh
Confidence 999999999999999999999976554443
No 53
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.66 E-value=1.1e-15 Score=132.22 Aligned_cols=104 Identities=18% Similarity=0.271 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.+++..|+++|+++ ++||.......... ......+...++. .+.......||+|.+|+.+++++|++|++|+
T Consensus 95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~-~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l 173 (211)
T TIGR02247 95 LRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEE-ALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECV 173 (211)
T ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCCccchhhh-HhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 3688999999999999998 88986432211100 1111223344444 2445556789999999999999999999999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
||||+. .|+.+|+++|+.+|+|.++..
T Consensus 174 ~i~D~~-~di~aA~~aG~~~i~v~~~~~ 200 (211)
T TIGR02247 174 FLDDLG-SNLKPAAALGITTIKVSDEEQ 200 (211)
T ss_pred EEcCCH-HHHHHHHHcCCEEEEECCHHH
Confidence 999995 999999999999999987533
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.65 E-value=4.2e-15 Score=133.46 Aligned_cols=59 Identities=22% Similarity=0.343 Sum_probs=52.8
Q ss_pred cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
|.+|+|+||+||||+++.+ +.|.+.++|++++++|+.++++| ||+...+...++++|+.
T Consensus 1 M~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaT--GR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 1 MTYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVT--GRHHVAIHPFYQALALD 60 (272)
T ss_pred CCccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEc--CCChHHHHHHHHhcCCC
Confidence 4689999999999999765 56789999999999999999999 99988888888888876
No 55
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.65 E-value=6.7e-16 Score=161.17 Aligned_cols=102 Identities=21% Similarity=0.397 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS 246 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~ 246 (313)
.++++.++++.|+++|+++ |+||......... +..-.+ ...|+. .+......+||+|++|+.++++++++|++|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~---L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~ 238 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDAN---LAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSEC 238 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHH---HHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccE
Confidence 4689999999999999999 8999765332211 111111 123333 244556678999999999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 247 IAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
+||||+. .|+++|+++|+++|+|.+|..
T Consensus 239 v~IgDs~-~Di~AA~~aGm~~I~v~~~~~ 266 (1057)
T PLN02919 239 VVIEDAL-AGVQAARAAGMRCIAVTTTLS 266 (1057)
T ss_pred EEEcCCH-HHHHHHHHcCCEEEEECCCCC
Confidence 9999997 999999999999999999864
No 56
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.65 E-value=1.6e-15 Score=130.14 Aligned_cols=104 Identities=18% Similarity=0.232 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
++++.++++.++++|+++ ++||......... .-....+...++. +.......+||+|++|+.+++++|++|++|++
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~--~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFW--PEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhHHHH--HhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 589999999999999998 8898654221100 0001123344444 35566778899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350 249 VGDSLHHDIKGANAAGIQSVFIIGGIHAT 277 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~ 277 (313)
|||+. .|+++|+++|+.++++..+..-.
T Consensus 164 vgD~~-~di~aA~~aG~~~i~~~~~~~~~ 191 (199)
T PRK09456 164 FDDNA-DNIEAANALGITSILVTDKQTIP 191 (199)
T ss_pred eCCCH-HHHHHHHHcCCEEEEecCCccHH
Confidence 99996 99999999999999998865543
No 57
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.63 E-value=3.1e-15 Score=124.64 Aligned_cols=45 Identities=24% Similarity=0.319 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHHHHhC--CCCCcEEEEcCCc-------hhhHHHHHHcCCcEEE
Q 021350 225 GKPDKIIYKSAMAMVG--VDACDSIAVGDSL-------HHDIKGANAAGIQSVF 269 (313)
Q Consensus 225 gKP~~~~~~~~~~~lg--v~~~~~v~IGDs~-------~~Di~~a~~aG~~~i~ 269 (313)
.||+|+.++.+++++| +++++++||||+. .+|+++|+++|+.+++
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 3999999999999999 9999999999994 3699999999998864
No 58
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.63 E-value=9.9e-15 Score=120.89 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=49.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
.||+|..|..+++++++++++|+||||+. +|+++|+++|+.+++|.+|.-...
T Consensus 102 ~KP~~~~~~~~~~~~~~~~~e~l~IGD~~-~Di~~A~~aGi~~i~~~~~~~~~~ 154 (161)
T TIGR01261 102 RKPKIKLLEPYLKKNLIDKARSYVIGDRE-TDMQLAENLGIRGIQYDEEELNWD 154 (161)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEeCCH-HHHHHHHHCCCeEEEEChhhcCHH
Confidence 49999999999999999999999999995 999999999999999999876554
No 59
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.61 E-value=4.7e-15 Score=119.57 Aligned_cols=47 Identities=26% Similarity=0.496 Sum_probs=46.0
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
||.+..|..|++.+++++++|+||||.+.||+.+|+.+|+.||+|..
T Consensus 93 KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 93 KPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred CccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 99999999999999999999999999999999999999999999966
No 60
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.61 E-value=1.5e-15 Score=146.35 Aligned_cols=103 Identities=17% Similarity=0.105 Sum_probs=75.7
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
.++++.++|+.|+++|+++ ++||......... +..-.+...|+.. +.+.. .+||+|+.|..+++++ +|++|+
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~---l~~~~l~~~f~~i~~~d~v-~~~~kP~~~~~al~~l--~~~~~v 404 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASNGLTEYLRAI---VSYYDLDQWVTETFSIEQI-NSLNKSDLVKSILNKY--DIKEAA 404 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHH---HHHCCcHhhcceeEecCCC-CCCCCcHHHHHHHHhc--CcceEE
Confidence 3689999999999999999 8999765333221 1112233444432 33222 3477888999999987 479999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
||||+. +|+++|+++|+.+|+|.+|....+.
T Consensus 405 ~VGDs~-~Di~aAk~AG~~~I~v~~~~~~~~~ 435 (459)
T PRK06698 405 VVGDRL-SDINAAKDNGLIAIGCNFDFAQEDE 435 (459)
T ss_pred EEeCCH-HHHHHHHHCCCeEEEEeCCCCcccc
Confidence 999996 9999999999999999998765543
No 61
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.60 E-value=6.5e-16 Score=130.18 Aligned_cols=95 Identities=26% Similarity=0.330 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
++++.+.++.++++|+++ ++||..... ... .....+...++. +.+.....+||+|..|+.+++++|++|++|+|
T Consensus 87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~---~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 162 (183)
T TIGR01509 87 LPGVEPLLEALRARGKKLALLTNSPRDH-AVL---VQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF 162 (183)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHH-HHH---HHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 578999999999999988 899976643 111 110223334443 34455668999999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEE
Q 021350 249 VGDSLHHDIKGANAAGIQSVFI 270 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V 270 (313)
|||+. .|+++|+++|+.+|+|
T Consensus 163 vgD~~-~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 163 VDDSP-AGIEAAKAAGMHTVLV 183 (183)
T ss_pred EcCCH-HHHHHHHHcCCEEEeC
Confidence 99997 9999999999999986
No 62
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.58 E-value=2.4e-15 Score=127.38 Aligned_cols=95 Identities=21% Similarity=0.263 Sum_probs=68.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHH-hcCceeec----CCCCHHHHHHHHHHhCCCCC
Q 021350 170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWM----GKPDKIIYKSAMAMVGVDAC 244 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~----gKP~~~~~~~~~~~lgv~~~ 244 (313)
.++++.++|+.|+ +...++||......... +..-.+...++. .+...... .||+|++|+.+++++|++|+
T Consensus 85 ~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~---l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 85 PDPELRNLLLRLP--GRKIIFTNGDRAHARRA---LNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCHHHHHHHHhCC--CCEEEEeCCCHHHHHHH---HHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 3578899988875 33348898765332221 111123344443 23333333 59999999999999999999
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350 245 DSIAVGDSLHHDIKGANAAGIQSVFI 270 (313)
Q Consensus 245 ~~v~IGDs~~~Di~~a~~aG~~~i~V 270 (313)
+|+||||+. .|+++|+++|+++|+|
T Consensus 160 ~~l~vgD~~-~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 160 RAIFFDDSA-RNIAAAKALGMKTVLV 184 (184)
T ss_pred ceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence 999999996 9999999999999986
No 63
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.57 E-value=1.5e-13 Score=120.40 Aligned_cols=59 Identities=15% Similarity=0.194 Sum_probs=52.0
Q ss_pred cCccEEEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 28 RRFKAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 28 ~~~k~iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
|.+|+|+||+||||+++.+. .+.+.++|++++++|++++++| ||+...+...++.+|++
T Consensus 1 m~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 1 MKIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILAT--GNVLCFARAAAKLIGTS 60 (230)
T ss_pred CceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEc--CCchHHHHHHHHHhCCC
Confidence 46899999999999997764 4689999999999999999999 98888888888888876
No 64
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.57 E-value=7.6e-14 Score=125.29 Aligned_cols=60 Identities=18% Similarity=0.191 Sum_probs=53.2
Q ss_pred cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
|.+|+|+||+||||+++.+ +.+.+.++|++++++|+.++++| ||+...+...++++|+..
T Consensus 1 m~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 1 MAIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTT--GRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred CceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEec--CCChHHHHHHHHHhCCCC
Confidence 4689999999999999765 55789999999999999999999 999988888889888864
No 65
>PLN02811 hydrolase
Probab=99.56 E-value=5.3e-15 Score=128.97 Aligned_cols=106 Identities=19% Similarity=0.271 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCc--eeecCCCCHHHHHHHHHHhC---CC
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGE--VRWMGKPDKIIYKSAMAMVG---VD 242 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~--~~~~gKP~~~~~~~~~~~lg---v~ 242 (313)
.++++.++++.|+++|+++ ++||......... ......+...++. .+.. ....+||+|++|..++++++ ++
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~--~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 156 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHFDLK--TQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD 156 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhHHHH--HcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence 3689999999999999999 8888654221111 1111233344443 2444 45678999999999999996 99
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 243 ACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 243 ~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
|++|+||||+. .|+++|+++|+++|+|.+|.....
T Consensus 157 ~~~~v~IgDs~-~di~aA~~aG~~~i~v~~~~~~~~ 191 (220)
T PLN02811 157 PGKVLVFEDAP-SGVEAAKNAGMSVVMVPDPRLDKS 191 (220)
T ss_pred ccceEEEeccH-hhHHHHHHCCCeEEEEeCCCCcHh
Confidence 99999999997 999999999999999999875543
No 66
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.56 E-value=4.1e-14 Score=121.16 Aligned_cols=97 Identities=13% Similarity=0.120 Sum_probs=67.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHH----HHH-hcCceeecCCCCHHHHHHHHHHhCCCCC
Q 021350 170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASK----FEK-LGGEVRWMGKPDKIIYKSAMAMVGVDAC 244 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~----~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~ 244 (313)
.++++.++|..|++.+..+++||............+ .+... ++. .+.+ ..||+|+.|+.+++++| |+
T Consensus 75 ~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~---~l~~~f~~~f~~i~~~~---~~~~kp~~~~~a~~~~~--~~ 146 (197)
T PHA02597 75 AYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQF---NLNALFPGAFSEVLMCG---HDESKEKLFIKAKEKYG--DR 146 (197)
T ss_pred CCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhC---CHHHhCCCcccEEEEec---cCcccHHHHHHHHHHhC--CC
Confidence 468999999999887544477875542221111011 11221 121 1122 24788899999999999 89
Q ss_pred cEEEEcCCchhhHHHHHHc--CCcEEEEcCCCC
Q 021350 245 DSIAVGDSLHHDIKGANAA--GIQSVFIIGGIH 275 (313)
Q Consensus 245 ~~v~IGDs~~~Di~~a~~a--G~~~i~V~~G~~ 275 (313)
+|+||||+. +|+.+|+++ |+++|+|.+|..
T Consensus 147 ~~v~vgDs~-~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 147 VVCFVDDLA-HNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred cEEEeCCCH-HHHHHHHHHHcCCcEEEecchhh
Confidence 999999996 999999999 999999999853
No 67
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.56 E-value=3e-14 Score=122.84 Aligned_cols=100 Identities=24% Similarity=0.320 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH--h-cCceeecCCCCHHHHHHHHHHhCCCC-C
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK--L-GGEVRWMGKPDKIIYKSAMAMVGVDA-C 244 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~--~-~~~~~~~gKP~~~~~~~~~~~lgv~~-~ 244 (313)
..+++++.++.|+.+|+++ ++|+.+.....-+. -..+.+...|.. . +......|||+|++|..+++++|.+| +
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~--~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~ 170 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKI--SRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPS 170 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHH--HHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCcc
Confidence 3479999999999999999 88886542221111 001223333333 2 23456789999999999999999999 9
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 245 DSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
.|++++|++ ..+++|++||+++|+|.+
T Consensus 171 k~lVfeds~-~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 171 KCLVFEDSP-VGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred ceEEECCCH-HHHHHHHhcCCeEEEecC
Confidence 999999997 999999999999999999
No 68
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.55 E-value=8.6e-14 Score=125.19 Aligned_cols=57 Identities=19% Similarity=0.142 Sum_probs=51.6
Q ss_pred ccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+|+|+||+||||++.++ +.+.+.++|++++++|+.++++| ||+...+...++++|++
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFAT--GRHVLEMQHILGALSLD 59 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHcCCC
Confidence 78999999999999765 55789999999999999999999 99998888889999886
No 69
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.54 E-value=5.6e-13 Score=111.03 Aligned_cols=56 Identities=34% Similarity=0.449 Sum_probs=51.6
Q ss_pred ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
.+.||++.+++.+++++++++++.+||||++ +|+++|.++|+..+.+.+|......
T Consensus 102 ~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~~~~~~~~ 157 (181)
T COG0241 102 DCRKPKPGMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTGIGVTTD 157 (181)
T ss_pred cccCCChHHHHHHHHHhCCCccceEEecCcH-HHHHHHHHCCCCceEEEcCcccccc
Confidence 3449999999999999999999999999997 9999999999999999999887654
No 70
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.53 E-value=7.1e-13 Score=119.23 Aligned_cols=58 Identities=21% Similarity=0.174 Sum_probs=52.8
Q ss_pred CccEEEEeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 29 RFKAWLLDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++++|++|+||||+++.+.+ +.+.++|++|+++|++++++| ||+...+...++++|++
T Consensus 6 ~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaT--GR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCS--SKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEc--CCCHHHHHHHHHHhCCC
Confidence 79999999999999987655 678999999999999999999 99999998899999985
No 71
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.53 E-value=2.3e-13 Score=121.87 Aligned_cols=60 Identities=28% Similarity=0.371 Sum_probs=54.4
Q ss_pred cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
|.+++|+||+||||+++++ +.+.+.++|++++++|++++++| ||+...+.+.++++|+..
T Consensus 1 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaT--GR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLAT--GRPLPDVLSILEELGLDG 61 (264)
T ss_pred CCeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEEC--CCChHHHHHHHHHcCCCc
Confidence 5789999999999999876 45679999999999999999999 999999999999999973
No 72
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.52 E-value=1.1e-13 Score=110.00 Aligned_cols=130 Identities=34% Similarity=0.440 Sum_probs=95.1
Q ss_pred EEEEeccceeecCC---------ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHH
Q 021350 32 AWLLDQFGVLHDGK---------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT 102 (313)
Q Consensus 32 ~iifDlDGTL~~~~---------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~ 102 (313)
+++||+||||+... .+.+++.+++++|+++|+++.++||+. ...+...++.+|+.... +.++.+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~--~~~~~~~~~~~~~~~~~-~~i~~~~~~~ 77 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKS--RREVLELLEELGLDDYF-DPVITSNGAA 77 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCch--HHHHHHHHHHcCCchhh-hheeccchhh
Confidence 47999999999988 678999999999999999999999554 56666677777774222 1222111000
Q ss_pred HHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021350 103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICA 182 (313)
Q Consensus 103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 182 (313)
.. ..
T Consensus 78 ~~-------------------------------------~~--------------------------------------- 81 (139)
T cd01427 78 IY-------------------------------------YP--------------------------------------- 81 (139)
T ss_pred hh-------------------------------------cc---------------------------------------
Confidence 00 00
Q ss_pred hCCCcEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHH
Q 021350 183 SKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANA 262 (313)
Q Consensus 183 ~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~ 262 (313)
... ...+......+||++..+..++++++.+++++++|||+. +|++++++
T Consensus 82 ----------~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~ 131 (139)
T cd01427 82 ----------KEG-------------------LFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKA 131 (139)
T ss_pred ----------ccc-------------------ccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH-HHHHHHHH
Confidence 000 000223456679999999999999999999999999996 99999999
Q ss_pred cCCcEEEE
Q 021350 263 AGIQSVFI 270 (313)
Q Consensus 263 aG~~~i~V 270 (313)
+|+++++|
T Consensus 132 ~g~~~i~v 139 (139)
T cd01427 132 AGGLGVAV 139 (139)
T ss_pred cCCceeeC
Confidence 99999875
No 73
>PRK10976 putative hydrolase; Provisional
Probab=99.51 E-value=2.6e-13 Score=121.55 Aligned_cols=57 Identities=21% Similarity=0.223 Sum_probs=51.3
Q ss_pred ccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+|+|+||+||||+++.+ +.+.+.++|++++++|++++++| ||+...+...++.+|++
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaT--GR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFAT--GRHHVDVGQIRDNLEIK 59 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCChHHHHHHHHhcCCC
Confidence 78999999999999765 55789999999999999999999 99988888888888886
No 74
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.49 E-value=5.6e-15 Score=122.76 Aligned_cols=96 Identities=26% Similarity=0.427 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
++++.++|+.++++|+++ ++||.+........ ..-.+...++. ++.......||+|..|..+++++|++|++|++
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l---~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~ 155 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRERIERVL---ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF 155 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH---HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred hhhhhhhhhhcccccceeEEeecCCcccccccc---cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence 478899999999899999 78987543221111 00111122222 23345667899999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEE
Q 021350 249 VGDSLHHDIKGANAAGIQSVFI 270 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V 270 (313)
|||+. .|+++|+++|+.+|+|
T Consensus 156 vgD~~-~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 156 VGDSP-SDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EESSH-HHHHHHHHTTSEEEEE
T ss_pred EeCCH-HHHHHHHHcCCeEEeC
Confidence 99997 9999999999999987
No 75
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.48 E-value=4.3e-14 Score=116.09 Aligned_cols=86 Identities=26% Similarity=0.425 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350 172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV 249 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I 249 (313)
+++.+++..++++|+++ ++||.......... ... +...+.. .+..... +||+|+.|..+++++|+++ +|+||
T Consensus 67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~---~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~i 140 (154)
T TIGR01549 67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLLL---RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLHV 140 (154)
T ss_pred cCHHHHHHHHHHCcCeEEEEeCCchHHHHHHH---HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEE
Confidence 67899999999999988 88987653322111 000 2223332 2334445 8999999999999999999 99999
Q ss_pred cCCchhhHHHHHHcC
Q 021350 250 GDSLHHDIKGANAAG 264 (313)
Q Consensus 250 GDs~~~Di~~a~~aG 264 (313)
||+. .|+++|+++|
T Consensus 141 GDs~-~Di~aa~~aG 154 (154)
T TIGR01549 141 GDNL-NDIEGARNAG 154 (154)
T ss_pred eCCH-HHHHHHHHcc
Confidence 9995 9999999987
No 76
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.48 E-value=1.5e-13 Score=117.74 Aligned_cols=85 Identities=24% Similarity=0.170 Sum_probs=61.4
Q ss_pred HHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHh-cCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcC
Q 021350 174 LEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKL-GGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGD 251 (313)
Q Consensus 174 ~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGD 251 (313)
..++|+.|+++|+++ ++||......... +..-.+...++.. +.+.... ||+|..|..+++++|+++++|+||||
T Consensus 111 ~~~~L~~l~~~g~~~~i~T~~~~~~~~~~---l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD 186 (197)
T TIGR01548 111 PKGLLRELHRAPKGMAVVTGRPRKDAAKF---LTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGD 186 (197)
T ss_pred HHHHHHHHHHcCCcEEEECCCCHHHHHHH---HHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeC
Confidence 478888898899998 8898765322111 1111233334432 3333334 99999999999999999999999999
Q ss_pred CchhhHHHHHHc
Q 021350 252 SLHHDIKGANAA 263 (313)
Q Consensus 252 s~~~Di~~a~~a 263 (313)
+. +|+++|+++
T Consensus 187 ~~-~Di~aA~~a 197 (197)
T TIGR01548 187 TV-DDIITGRKA 197 (197)
T ss_pred CH-HHHHHHHhC
Confidence 97 999999975
No 77
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.47 E-value=1.1e-12 Score=121.16 Aligned_cols=51 Identities=22% Similarity=0.277 Sum_probs=46.8
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
.+||+|.++..++++++++|++++||||+. +|+++|+++|+++|+|.....
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~~~~ 152 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGDRE-TDVQLAENMGIKGIRYARETL 152 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEECCCC
Confidence 459999999999999999999999999996 999999999999999966433
No 78
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.47 E-value=3.8e-13 Score=112.37 Aligned_cols=52 Identities=12% Similarity=0.203 Sum_probs=46.6
Q ss_pred CCCHHHHHHHHHHh--CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 226 KPDKIIYKSAMAMV--GVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 226 KP~~~~~~~~~~~l--gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
||.+.+++.+.+++ |++|++|+||||+. .|+.+|+++|+.+++|.+|....+
T Consensus 111 kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~g~~~~~ 164 (174)
T TIGR01685 111 KQLEMILQKVNKVDPSVLKPAQILFFDDRT-DNVREVWGYGVTSCYCPSGMDKGT 164 (174)
T ss_pred HHHHHHHHHhhhcccCCCCHHHeEEEcChh-HhHHHHHHhCCEEEEcCCCccHHH
Confidence 78888888888888 89999999999996 999999999999999999876544
No 79
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.46 E-value=1.3e-12 Score=113.38 Aligned_cols=57 Identities=14% Similarity=0.158 Sum_probs=49.9
Q ss_pred ccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+|+|+||+||||++... +.+.+.++|++|++.|++++++| +|+...+...++.+++.
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~T--GR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVT--GNTVPFARALAVLIGTS 58 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEc--CCcchhHHHHHHHhCCC
Confidence 57999999999998765 55789999999999999999999 88888887778888876
No 80
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.46 E-value=2.4e-12 Score=115.92 Aligned_cols=59 Identities=24% Similarity=0.214 Sum_probs=52.3
Q ss_pred cCccEEEEeccceeec-CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 28 RRFKAWLLDQFGVLHD-GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 28 ~~~k~iifDlDGTL~~-~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
|.+|+|++|+||||++ .....+.+.++|++|+++|++++++| +|+...+...++++|+.
T Consensus 2 ~~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaT--gR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 2 MMKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCT--SKTAAEVEVLRKELGLE 61 (273)
T ss_pred CcceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCC
Confidence 4589999999999999 45677889999999999999999999 77788888888989986
No 81
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.45 E-value=3.2e-13 Score=117.67 Aligned_cols=55 Identities=24% Similarity=0.252 Sum_probs=48.3
Q ss_pred EEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 32 AWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 32 ~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.|++|+||||+++.+ .++.+.++|++++++|++++++| +|+...+...++.+|+.
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~T--gR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCT--SKTAAEVEYLQKALGLT 56 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHcCCC
Confidence 489999999999776 56678999999999999999999 88888888888888875
No 82
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.44 E-value=7e-13 Score=120.91 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=45.4
Q ss_pred CCCHHHHHHHHHHhCC-CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 226 KPDKIIYKSAMAMVGV-DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv-~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
||+|..++.++++++. ++++|+||||+. +|+++|+++|+++++|.+|-
T Consensus 251 kp~p~~~~~~l~~~~~~~~~~~~~vgD~~-~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 251 RPDDVVKEEIFWEKIAPKYDVLLAVDDRD-QVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred CCcHHHHHHHHHHHhccCceEEEEEcCcH-HHHHHHHHhCCeEEEecCCC
Confidence 9999999999999998 689999999996 99999999999999999873
No 83
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.43 E-value=9.9e-13 Score=114.26 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=76.4
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
.|+++.++|+.++++|+++ ++||...............+.+...+...- .....+||+|+.|..+++++|++|++|++
T Consensus 96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~f-d~~~g~KP~p~~y~~i~~~lgv~p~e~lf 174 (220)
T TIGR01691 96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYF-DTTVGLKTEAQSYVKIAGQLGSPPREILF 174 (220)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEE-EeCcccCCCHHHHHHHHHHhCcChhHEEE
Confidence 4789999999999999998 889976532211100111122333333211 11234699999999999999999999999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 249 VGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
|||+. .|+++|+++|+.++++.++..
T Consensus 175 VgDs~-~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 175 LSDII-NELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred EeCCH-HHHHHHHHcCCEEEEEECCCC
Confidence 99995 999999999999999988653
No 84
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.43 E-value=4.2e-12 Score=113.17 Aligned_cols=55 Identities=27% Similarity=0.380 Sum_probs=48.4
Q ss_pred EEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 32 AWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 32 ~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+|+||+||||++... +.+.+.++|++++++|+.++++| +|+...+...++++|+.
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaT--GR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLAT--GRPYKEVKNILKELGLD 56 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEe--CCCHHHHHHHHHHcCCC
Confidence 479999999999765 55789999999999999999999 88888888888888876
No 85
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.42 E-value=1e-12 Score=115.00 Aligned_cols=55 Identities=24% Similarity=0.170 Sum_probs=49.9
Q ss_pred EEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 32 ~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+|+||+||||+++...++.+.++|++++++|++++++| +|+..++...++++|+.
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~T--gR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVS--SKTRAEQEYYREELGVE 55 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEe--CCCHHHHHHHHHHcCCC
Confidence 48999999999977778889999999999999999998 88888888889999985
No 86
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.40 E-value=1.3e-12 Score=113.91 Aligned_cols=54 Identities=17% Similarity=0.214 Sum_probs=47.0
Q ss_pred EEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 33 WLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 33 iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
|+||+||||+++... .+.+.++|+++++.|++++++| ||+...+...++.+|++
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aT--GR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVT--GNSVQFARALAKLIGTP 55 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEc--CCchHHHHHHHHHhCCC
Confidence 589999999998764 4678899999999999999999 88888888888888864
No 87
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.40 E-value=5.2e-12 Score=111.11 Aligned_cols=177 Identities=26% Similarity=0.303 Sum_probs=116.9
Q ss_pred EEEeccceeecCC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhcCc
Q 021350 33 WLLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDD 111 (313)
Q Consensus 33 iifDlDGTL~~~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~~~ 111 (313)
|+||+||||+++. ++.+.+.++|++|+++|++++++| ||+...+.+.+..+++. ..+++.+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~T--GR~~~~~~~~~~~~~~~----~~~I~~n------------ 62 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIAT--GRSYSSIKRLLKELGID----DYFICSN------------ 62 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEEC--SSTHHHHHHHHHHTTHC----SEEEEGG------------
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEc--cCcccccccccccccch----hhhcccc------------
Confidence 6899999999865 445789999999999999999999 99999999999988887 2344444
Q ss_pred hhhhhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE
Q 021350 112 AWFAALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVA 191 (313)
Q Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~i~t 191 (313)
|..++ . .+...+.. ..++.+.+.+++..+.+++..+.+.
T Consensus 63 ------Ga~i~-~---------------------~~~~~l~~-------------~~i~~~~~~~i~~~~~~~~~~~~~~ 101 (254)
T PF08282_consen 63 ------GALID-D---------------------PKGKILYE-------------KPIDSDDVKKILKYLKEHNISFFFY 101 (254)
T ss_dssp ------GTEEE-E---------------------TTTEEEEE-------------ESB-HHHHHHHHHHHHHTTCEEEEE
T ss_pred ------cceee-e---------------------cccccchh-------------hheeccchhheeehhhhcccccccc
Confidence 33220 0 11111111 3466788888888888888777444
Q ss_pred cCCccccccc---h------h------------------------ccCCchHHHH---HH-HhcCc--------------
Q 021350 192 NPDYVTVEAR---A------L------------------------RVMPGTLASK---FE-KLGGE-------------- 220 (313)
Q Consensus 192 n~d~~~~~~~---~------~------------------------~~~~g~~~~~---~~-~~~~~-------------- 220 (313)
.++..+.... . . ......+..+ +. .....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~ 181 (254)
T PF08282_consen 102 TDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSSPYFLEIT 181 (254)
T ss_dssp ESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEE
T ss_pred cceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEecccceEEe
Confidence 3333322222 0 0 0011122222 11 12211
Q ss_pred eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 221 VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
+..+.|-. +++.+++.+|++++++++|||+. ||+.|.+.+| .++.+..
T Consensus 182 ~~~vsK~~--ai~~l~~~~~i~~~~~~~~GD~~-ND~~Ml~~~~-~~~am~n 229 (254)
T PF08282_consen 182 PKGVSKGS--AIKYLLEYLGISPEDIIAFGDSE-NDIEMLELAG-YSVAMGN 229 (254)
T ss_dssp ETTSSHHH--HHHHHHHHHTTSGGGEEEEESSG-GGHHHHHHSS-EEEEETT
T ss_pred eCCCCHHH--HHHHHhhhcccccceeEEeeccc-ccHhHHhhcC-eEEEEcC
Confidence 23355655 89999999999999999999995 9999999999 4455554
No 88
>PLN02887 hydrolase family protein
Probab=99.40 E-value=3.8e-12 Score=124.62 Aligned_cols=59 Identities=22% Similarity=0.298 Sum_probs=52.8
Q ss_pred cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+++|+|+||+||||+++.+ +.+.+.++|++++++|+.++++| ||+...+...++++|+.
T Consensus 306 ~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIAT--GR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIAT--GKARPAVIDILKMVDLA 365 (580)
T ss_pred cCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHhCcc
Confidence 3799999999999999765 55789999999999999999999 99988888888888875
No 89
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.38 E-value=3.6e-12 Score=104.94 Aligned_cols=47 Identities=15% Similarity=0.239 Sum_probs=42.0
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
||+|..+..+++++|+++++|+||||+. +|+.+++++|+. +.|..+.
T Consensus 75 ~~k~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~-~~v~~~~ 121 (154)
T TIGR01670 75 SNKLIAFSDILEKLALAPENVAYIGDDL-IDWPVMEKVGLS-VAVADAH 121 (154)
T ss_pred cchHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCe-EecCCcC
Confidence 5677899999999999999999999996 999999999986 7776653
No 90
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.37 E-value=5.2e-12 Score=109.80 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-h---c-------CceeecCCCCHHHHHHHHHH
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L---G-------GEVRWMGKPDKIIYKSAMAM 238 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~---~-------~~~~~~gKP~~~~~~~~~~~ 238 (313)
++++.+.++.++++|.++ ++||............++. ...+.. + + ......++|+|.+|+.++++
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 163 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGL---DAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK 163 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCC---CceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence 578899999999999988 7888653222111000110 011100 0 0 01112356789999999999
Q ss_pred hCCCCCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350 239 VGVDACDSIAVGDSLHHDIKGANAAGIQSV 268 (313)
Q Consensus 239 lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i 268 (313)
+++++++|++|||+. +|+.+|+++|+..+
T Consensus 164 ~~~~~~~~i~iGDs~-~Di~aa~~ag~~i~ 192 (219)
T TIGR00338 164 EGISPENTVAVGDGA-NDLSMIKAAGLGIA 192 (219)
T ss_pred cCCCHHHEEEEECCH-HHHHHHHhCCCeEE
Confidence 999999999999996 99999999999753
No 91
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.37 E-value=3.6e-13 Score=112.91 Aligned_cols=83 Identities=18% Similarity=0.240 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350 171 LQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV 249 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I 249 (313)
++++.++|+. ..++||......... +....+...++. ++.+....+||+|++|+.+++++|++|++|+||
T Consensus 92 ~~g~~~~L~~------~~i~Tn~~~~~~~~~---l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 92 WPDSAAALAR------VAILSNASHWAFDQF---AQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred CCchHHHHHH------HhhhhCCCHHHHHHH---HHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 4667777652 227888766433322 111234555655 355566788999999999999999999999999
Q ss_pred cCCchhhHHHHHHc
Q 021350 250 GDSLHHDIKGANAA 263 (313)
Q Consensus 250 GDs~~~Di~~a~~a 263 (313)
||+. .|+.+|+++
T Consensus 163 gD~~-~Di~~A~~~ 175 (175)
T TIGR01493 163 AAHQ-WDLIGARKF 175 (175)
T ss_pred ecCh-hhHHHHhcC
Confidence 9996 999999874
No 92
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.37 E-value=1.1e-11 Score=110.58 Aligned_cols=55 Identities=25% Similarity=0.242 Sum_probs=50.4
Q ss_pred EEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 32 AWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 32 ~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.|+||+||||+++.+ .++.+.+++++|+++|++++++| +|+...+...++++|++
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~T--gR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCT--SKTAAEVEYLRKELGLE 56 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHcCCC
Confidence 479999999999887 77789999999999999999999 99999999999999986
No 93
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.37 E-value=2.4e-12 Score=112.86 Aligned_cols=103 Identities=14% Similarity=0.111 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchh-ccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCc
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARAL-RVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACD 245 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~-~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~ 245 (313)
+.++.+.++++.++++|.++ ++||....-...... .+..-.+...+.. ++.+.....||++. .+++++++
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i---- 186 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI---- 186 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC----
Confidence 45577999999999999998 889864310100000 0000011122222 23334444678765 35566766
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 246 SIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
++||||+. +||.+|+++|++++.|++|..+...
T Consensus 187 ~i~vGDs~-~DI~aAk~AGi~~I~V~~g~~s~~~ 219 (237)
T TIGR01672 187 RIHYGDSD-NDITAAKEAGARGIRILRASNSTYK 219 (237)
T ss_pred eEEEeCCH-HHHHHHHHCCCCEEEEEecCCCCCC
Confidence 79999996 9999999999999999999887763
No 94
>PLN02954 phosphoserine phosphatase
Probab=99.36 E-value=6e-12 Score=109.77 Aligned_cols=100 Identities=11% Similarity=0.048 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHH---------H-hcC---ceeecCCCCHHHHHHHH
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFE---------K-LGG---EVRWMGKPDKIIYKSAM 236 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~---------~-~~~---~~~~~gKP~~~~~~~~~ 236 (313)
++++.++++.++++|.++ ++|++...........++... ...+. . .+. .+...++|+|..++.++
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~-~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~ 164 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPP-ENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIK 164 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCCh-hhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHH
Confidence 578999999999999988 788765432211100010000 00110 0 000 11124567788999999
Q ss_pred HHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 237 AMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 237 ~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
++++. ++|+||||+. +|+.+|+++|+..+.. +|.+
T Consensus 165 ~~~~~--~~~i~iGDs~-~Di~aa~~~~~~~~~~-~~~~ 199 (224)
T PLN02954 165 KKHGY--KTMVMIGDGA-TDLEARKPGGADLFIG-YGGV 199 (224)
T ss_pred HHcCC--CceEEEeCCH-HHHHhhhcCCCCEEEe-cCCC
Confidence 98875 7999999996 9999999988876654 5433
No 95
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.36 E-value=3.9e-12 Score=106.01 Aligned_cols=44 Identities=18% Similarity=0.264 Sum_probs=39.9
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEE
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFI 270 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V 270 (313)
||+|+.++.+++++++++++|++|||+. +|+.+++++|+..+--
T Consensus 81 kpkp~~~~~~~~~l~~~~~ev~~iGD~~-nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 81 KKKTEPYAQMLEEMNISDAEVCYVGDDL-VDLSMMKRVGLAVAVG 124 (169)
T ss_pred CCCHHHHHHHHHHcCcCHHHEEEECCCH-HHHHHHHHCCCeEECc
Confidence 7888999999999999999999999996 9999999999665543
No 96
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.35 E-value=4.7e-12 Score=107.29 Aligned_cols=44 Identities=14% Similarity=0.231 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII 271 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~ 271 (313)
++.+..++.+++++|+++++|+||||+. +|+.+++++|+.. .|.
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a~~aG~~~-~v~ 138 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDDL-IDWPVMEKVGLSV-AVA 138 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCeE-ecC
Confidence 3445689999999999999999999996 9999999999984 453
No 97
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.35 E-value=8.1e-12 Score=103.15 Aligned_cols=48 Identities=19% Similarity=0.445 Sum_probs=41.3
Q ss_pred CCCHHHHHHHHHHhCC-----CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 226 KPDKIIYKSAMAMVGV-----DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv-----~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
||. .+..+++.++. +|++++||||++-|||.+|+.+|+-+|||+.|..
T Consensus 116 KP~--~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv~ 168 (168)
T PF09419_consen 116 KPG--CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGVT 168 (168)
T ss_pred CCc--cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCcC
Confidence 773 67777776653 5999999999999999999999999999999863
No 98
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.32 E-value=6.2e-11 Score=105.31 Aligned_cols=56 Identities=16% Similarity=0.056 Sum_probs=48.2
Q ss_pred EEEEeccceeec---CC-ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 32 AWLLDQFGVLHD---GK-KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 32 ~iifDlDGTL~~---~~-~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
+|+.|+||||++ ++ +..|...+.+++++++|+.++++| ||+..++.+.++++++..
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aT--GR~~~~~~~~~~~~~~~~ 62 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYST--GRSPHSYKELQKQKPLLT 62 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEc--CCCHHHHHHHHhcCCCCC
Confidence 688999999996 44 456788999999999999999999 999999998888888764
No 99
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.32 E-value=6e-12 Score=100.33 Aligned_cols=41 Identities=20% Similarity=0.214 Sum_probs=36.7
Q ss_pred cEEEEeccceeecCC-------------ccCccHHHHHHHHHHCCCcEEEEeCC
Q 021350 31 KAWLLDQFGVLHDGK-------------KPYPGAISTLEMLATTGAKMVVISNS 71 (313)
Q Consensus 31 k~iifDlDGTL~~~~-------------~~~~~a~~~l~~l~~~g~~~~~~Tn~ 71 (313)
|+++||+|||||++. +++|++.+.|+.|+++|+++.++||+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~ 54 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYN 54 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCC
Confidence 589999999999983 15789999999999999999999976
No 100
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.28 E-value=4.9e-11 Score=105.05 Aligned_cols=54 Identities=9% Similarity=0.099 Sum_probs=46.2
Q ss_pred EEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 32 ~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+|++|+||||+++.+.++...++++ ++++|+.++++| ||+..++.+.+..+++.
T Consensus 1 li~~DlDgTLl~~~~~~~~~~~~~~-~~~~gi~~viaT--GR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFVELLR-GSGDAVGFGIAT--GRSVESAKSRYAKLNLP 54 (236)
T ss_pred CeEEeccccccCCHHHHHHHHHHHH-hcCCCceEEEEe--CCCHHHHHHHHHhCCCC
Confidence 4789999999997766666556665 688999999999 99999999999999885
No 101
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.25 E-value=4.2e-11 Score=109.86 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCch-HHHHHHHhcC-------ceeecCCCCHHHHHHHHHHhCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGT-LASKFEKLGG-------EVRWMGKPDKIIYKSAMAMVGV 241 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~-~~~~~~~~~~-------~~~~~gKP~~~~~~~~~~~lgv 241 (313)
++++++.++.|++.|+++ ++|++...+...-...++... +.+.++...+ .....+||++..++.+++++|+
T Consensus 183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi 262 (322)
T PRK11133 183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEI 262 (322)
T ss_pred ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCC
Confidence 588999999999999998 888865433211110111100 0001110000 0223568999999999999999
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350 242 DACDSIAVGDSLHHDIKGANAAGIQSVF 269 (313)
Q Consensus 242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~ 269 (313)
++++|++|||+. +|+.|+++||+..++
T Consensus 263 ~~~qtIaVGDg~-NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 263 PLAQTVAIGDGA-NDLPMIKAAGLGIAY 289 (322)
T ss_pred ChhhEEEEECCH-HHHHHHHHCCCeEEe
Confidence 999999999997 999999999986665
No 102
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.22 E-value=6.7e-11 Score=101.14 Aligned_cols=103 Identities=15% Similarity=0.080 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHHH--hc---Ccee--ecCCCCHHHHHHHHHHhCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEK--LG---GEVR--WMGKPDKIIYKSAMAMVGV 241 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~~--~~---~~~~--~~gKP~~~~~~~~~~~lgv 241 (313)
++++.+.+..|+++|+++ ++||....+.......++...+ ...+.. .+ ..+. ...++++..+..+++++|+
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~~~~ 161 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRELNP 161 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHHhCC
Confidence 578999999999999998 7888654222111000100000 000000 00 0000 0112333588899999999
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 242 DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
++++|+||||+. +|+.+|+++|+..+....+.
T Consensus 162 ~~~~~i~iGDs~-~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 162 SLTETVAVGDSK-NDLPMFEVADISISLGDEGH 193 (201)
T ss_pred CHHHEEEEcCCH-hHHHHHHhcCCeEEECCCcc
Confidence 999999999996 99999999999776655544
No 103
>PTZ00174 phosphomannomutase; Provisional
Probab=99.20 E-value=1.5e-10 Score=102.73 Aligned_cols=55 Identities=20% Similarity=0.199 Sum_probs=47.8
Q ss_pred cCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHh
Q 021350 28 RRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS 84 (313)
Q Consensus 28 ~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~ 84 (313)
|++|+|+||+||||+++.+ +.+.+.++|++++++|+.++++| ||+...+.+.+..
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaT--GR~~~~i~~~l~~ 58 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVG--GSDYPKIKEQLGE 58 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHhh
Confidence 6799999999999999875 56788999999999999999999 8888777666653
No 104
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.19 E-value=5.7e-11 Score=99.99 Aligned_cols=98 Identities=19% Similarity=0.244 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHh---c-C---ceeecCCCCHHHHHHHHHHhCCC-C
Q 021350 172 QDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKL---G-G---EVRWMGKPDKIIYKSAMAMVGVD-A 243 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~---~-~---~~~~~gKP~~~~~~~~~~~lgv~-~ 243 (313)
+.++..|..+++++ ++++||.+.+....- +.--++...|+.+ + . +..++-||++.+|+.+++..|++ |
T Consensus 103 ~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~---Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p 178 (244)
T KOG3109|consen 103 PVLRNLLLSLKKRR-KWIFTNAYKVHAIRI---LKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSP 178 (244)
T ss_pred HHHHHHHHhCcccc-EEEecCCcHHHHHHH---HHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCc
Confidence 57888887776555 779999887654332 2223445555542 1 1 35688999999999999999998 9
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 244 CDSIAVGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 244 ~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
.++++|.||. +.|..|++.|+.+++|+..-
T Consensus 179 ~~t~FfDDS~-~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 179 RNTYFFDDSE-RNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CceEEEcCch-hhHHHHHhccceeEEEEeee
Confidence 9999999995 99999999999999998843
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.18 E-value=4.9e-10 Score=98.24 Aligned_cols=45 Identities=27% Similarity=0.290 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
||++.. .++++++ ++||||+. +|+++|++||+.+|.|.+|..+..
T Consensus 174 K~~K~~---~l~~~~i----~I~IGDs~-~Di~aA~~AGi~~I~v~~G~~~~~ 218 (237)
T PRK11009 174 QYTKTQ---WLKKKNI----RIFYGDSD-NDITAAREAGARGIRILRAANSTY 218 (237)
T ss_pred CCCHHH---HHHhcCC----eEEEcCCH-HHHHHHHHcCCcEEEEecCCCCCC
Confidence 666543 4455665 99999996 999999999999999999987654
No 106
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.15 E-value=1.9e-09 Score=105.97 Aligned_cols=60 Identities=20% Similarity=0.180 Sum_probs=52.6
Q ss_pred hcCccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 27 TRRFKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 27 ~~~~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+|..|+|++|+||||++... ..+.+.++|++++++|++++++| ||+...+...++++|+.
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIAT--GRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCS--AKTMGEQDLYRNELGIK 473 (694)
T ss_pred CceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEe--CCCHHHHHHHHHHcCCC
Confidence 46789999999999999654 55788999999999999999999 98888888888888875
No 107
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.15 E-value=4.6e-10 Score=108.71 Aligned_cols=44 Identities=23% Similarity=0.289 Sum_probs=38.8
Q ss_pred CccEEEEeccceeecCC------------c-cCccHHHHHHHHHHCCCcEEEEeCCC
Q 021350 29 RFKAWLLDQFGVLHDGK------------K-PYPGAISTLEMLATTGAKMVVISNSS 72 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~------------~-~~~~a~~~l~~l~~~g~~~~~~Tn~~ 72 (313)
+-|+++||+||||+... + ++|++.+.|+.|++.|++++++||.+
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~ 223 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQG 223 (526)
T ss_pred cCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCc
Confidence 67899999999999732 1 47999999999999999999999976
No 108
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.14 E-value=1.4e-09 Score=93.50 Aligned_cols=53 Identities=30% Similarity=0.416 Sum_probs=44.4
Q ss_pred EEEEeccceeecCC--ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCC
Q 021350 32 AWLLDQFGVLHDGK--KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLG 86 (313)
Q Consensus 32 ~iifDlDGTL~~~~--~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G 86 (313)
.++||+||||++.. ++.+.+.++|++|++.|++++++| ||....+.+.++.++
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T--GR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREAGVKVVLVT--GRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHhCC
Confidence 47899999999864 456789999999999999999999 888887777777643
No 109
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.12 E-value=2.3e-10 Score=99.67 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhc-cCCchHHHHHHHhcCceeecCCCCHHH----------HHHHHH
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALR-VMPGTLASKFEKLGGEVRWMGKPDKII----------YKSAMA 237 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~gKP~~~~----------~~~~~~ 237 (313)
.++++.+.++.++++|+++ |+|++...+...-... +....+...-..+.++....+||+|.. ...+++
T Consensus 75 l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~ 154 (219)
T PRK09552 75 IREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIR 154 (219)
T ss_pred cCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHH
Confidence 3579999999999999998 8888655332211100 111000000000233445677888764 357888
Q ss_pred HhCCCCCcEEEEcCCchhhHHHHHHcCCcE
Q 021350 238 MVGVDACDSIAVGDSLHHDIKGANAAGIQS 267 (313)
Q Consensus 238 ~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~ 267 (313)
+++.++++|+||||+. +|+.+|++||+..
T Consensus 155 ~~~~~~~~~i~iGDs~-~Di~aa~~Ag~~~ 183 (219)
T PRK09552 155 KLSDTNDFHIVIGDSI-TDLEAAKQADKVF 183 (219)
T ss_pred HhccCCCCEEEEeCCH-HHHHHHHHCCcce
Confidence 9999999999999996 9999999999833
No 110
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.10 E-value=5.2e-09 Score=93.41 Aligned_cols=57 Identities=21% Similarity=0.191 Sum_probs=51.1
Q ss_pred ccEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 30 FKAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+|.|++||||||++.+. ..+.+.++|++|+++|++++++| +|+..++...++++|+.
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaT--GRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYS--LRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHhCCC
Confidence 47999999999999665 56789999999999999999999 98888998888999986
No 111
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.05 E-value=1.1e-09 Score=90.57 Aligned_cols=43 Identities=30% Similarity=0.361 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHHHHhC----CCCCcEEEEcCC----------chhhHHHHHHcCCcE
Q 021350 225 GKPDKIIYKSAMAMVG----VDACDSIAVGDS----------LHHDIKGANAAGIQS 267 (313)
Q Consensus 225 gKP~~~~~~~~~~~lg----v~~~~~v~IGDs----------~~~Di~~a~~aG~~~ 267 (313)
.||.+.+++.+++.++ ++.++++||||+ ..+|...|.++|++.
T Consensus 96 RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 96 RKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp STTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred CCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 3999999999999886 599999999995 138999999999874
No 112
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.03 E-value=1.3e-08 Score=91.38 Aligned_cols=55 Identities=25% Similarity=0.308 Sum_probs=46.1
Q ss_pred cEEEEeccceeecC------CccCccHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350 31 KAWLLDQFGVLHDG------KKPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLGF 87 (313)
Q Consensus 31 k~iifDlDGTL~~~------~~~~~~a~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~l~~~G~ 87 (313)
.+|+||+||||++. ..+.+.+.++|++|.+ .|+.++++| ||+...+.+.+..+++
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~S--GR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALIS--GRSMVELDALAKPYRF 76 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEe--CCCHHHHHHhcCcccc
Confidence 58999999999983 3556789999999998 799999999 9988888777766654
No 113
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.03 E-value=9e-10 Score=101.44 Aligned_cols=39 Identities=5% Similarity=0.015 Sum_probs=36.9
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI 265 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~ 265 (313)
||+|..+..+++++|+++++++||||++ .|+.++++++-
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~-~d~~~~~~~lp 124 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNP-AERANVKITLP 124 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCH-HHHHHHHHHCC
Confidence 8999999999999999999999999996 99999999774
No 114
>PTZ00445 p36-lilke protein; Provisional
Probab=99.02 E-value=2.8e-09 Score=90.21 Aligned_cols=49 Identities=18% Similarity=0.348 Sum_probs=45.4
Q ss_pred cCCCCHHH--H--HHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 224 MGKPDKII--Y--KSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 224 ~gKP~~~~--~--~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
+-||+|.+ | +.+++++|++|++|+.|-|+. ..+++|++.|+.++++..+
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~-~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDM-NNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCH-HHHHHHHHCCCEEEEcCCh
Confidence 33999999 9 999999999999999999996 8899999999999999864
No 115
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.00 E-value=8.1e-10 Score=90.29 Aligned_cols=38 Identities=21% Similarity=0.215 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 021350 225 GKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQ 266 (313)
Q Consensus 225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~ 266 (313)
+||+ |..+++++|.+|++|+||||++ .|+++++++|+.
T Consensus 100 ~KP~---~~k~l~~l~~~p~~~i~i~Ds~-~~~~aa~~ngI~ 137 (148)
T smart00577 100 VKGK---YVKDLSLLGRDLSNVIIIDDSP-DSWPFHPENLIP 137 (148)
T ss_pred cCCe---EeecHHHcCCChhcEEEEECCH-HHhhcCccCEEE
Confidence 3887 8999999999999999999996 999999988854
No 116
>PLN02382 probable sucrose-phosphatase
Probab=98.91 E-value=2.4e-08 Score=94.85 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=41.9
Q ss_pred eecCCCCHHHHHHHHHHh---CCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 222 RWMGKPDKIIYKSAMAMV---GVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 222 ~~~gKP~~~~~~~~~~~l---gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
..++|.. ++.++++++ |++++++++|||+. ||++|.+.+|..+|.|..
T Consensus 172 ~g~sKg~--Al~~L~~~~~~~gi~~~~~iafGDs~-NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 172 QGAGKGQ--ALAYLLKKLKAEGKAPVNTLVCGDSG-NDAELFSVPDVYGVMVSN 222 (413)
T ss_pred CCCCHHH--HHHHHHHHhhhcCCChhcEEEEeCCH-HHHHHHhcCCCCEEEEcC
Confidence 3455776 999999999 99999999999995 999999999987888855
No 117
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.89 E-value=3.5e-09 Score=90.98 Aligned_cols=92 Identities=14% Similarity=0.082 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-h--cCce--eecCCCCHHHHHHHHHHhCCCCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L--GGEV--RWMGKPDKIIYKSAMAMVGVDAC 244 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~--~~~~--~~~gKP~~~~~~~~~~~lgv~~~ 244 (313)
++++.+++..++++ .++ ++||....+.......++ +...+.. + .... ....+|.|.....++++++..++
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~g---l~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~ 145 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLG---WPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY 145 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcC---CchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence 57889999999888 787 788866543322111111 1122211 1 0011 11112334456677777777889
Q ss_pred cEEEEcCCchhhHHHHHHcCCcE
Q 021350 245 DSIAVGDSLHHDIKGANAAGIQS 267 (313)
Q Consensus 245 ~~v~IGDs~~~Di~~a~~aG~~~ 267 (313)
+|+||||+. +|+.+++++|+..
T Consensus 146 ~~v~iGDs~-~D~~~~~aa~~~v 167 (205)
T PRK13582 146 RVIAAGDSY-NDTTMLGEADAGI 167 (205)
T ss_pred eEEEEeCCH-HHHHHHHhCCCCE
Confidence 999999996 9999999999744
No 118
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.82 E-value=1.2e-08 Score=81.88 Aligned_cols=58 Identities=31% Similarity=0.476 Sum_probs=45.0
Q ss_pred CccEEEEeccceeecCCccCccHH-----------HHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAI-----------STLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~-----------~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++|.++||+||||.|+.-.+...- -.|..|++.|+++.++| +|...-+.++.+.+|+.
T Consensus 7 ~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIIT--Gr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIIT--GRDSPIVEKRAKDLGIK 75 (170)
T ss_pred hceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEe--CCCCHHHHHHHHHcCCc
Confidence 799999999999999765442211 25777888999999988 77777777788888875
No 119
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.81 E-value=1.5e-08 Score=87.86 Aligned_cols=125 Identities=14% Similarity=0.103 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhcc-CCchHHHHHHHhcCceeecCCCCHHHH----------HHHHHH
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRV-MPGTLASKFEKLGGEVRWMGKPDKIIY----------KSAMAM 238 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~gKP~~~~~----------~~~~~~ 238 (313)
++++.+.+..++++|.++ ++|++...+...-...+ ....+...-..++.......||+|..+ ..++++
T Consensus 72 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~ 151 (214)
T TIGR03333 72 REGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRK 151 (214)
T ss_pred cccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHH
Confidence 478899999999999998 77875442221110001 000100000012234456678887765 467777
Q ss_pred hCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCC-CcccccCCCCccchhhHHHHHh
Q 021350 239 VGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHA-TELGLDSYGEVADLSSVQTLVS 298 (313)
Q Consensus 239 lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~-~~~~~~~~~~~~~~~~~~~~~~ 298 (313)
++..+++++||||+. +|+.+|++||+ +++...... .+......-+..++.++.+++.
T Consensus 152 ~~~~~~~~i~iGDg~-~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 152 LSEPNDYHIVIGDSV-TDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HhhcCCcEEEEeCCH-HHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 878899999999995 99999999997 454431100 0111122333455666665554
No 120
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.81 E-value=6.6e-09 Score=92.19 Aligned_cols=181 Identities=19% Similarity=0.163 Sum_probs=95.5
Q ss_pred cEEEEeccceeecCCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhc
Q 021350 31 KAWLLDQFGVLHDGKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRR 109 (313)
Q Consensus 31 k~iifDlDGTL~~~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~ 109 (313)
..+++|+||||+++... ...-.+.++...+.++.++++| ||+.+++.+.+++.+++.+ +.++++.
T Consensus 3 ~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~~~~~~v~~T--GRs~~~~~~~~~~~~l~~P--d~~I~sv---------- 68 (247)
T PF05116_consen 3 RLLASDLDGTLIDGDDEALARLEELLEQQARPEILFVYVT--GRSLESVLRLLREYNLPQP--DYIITSV---------- 68 (247)
T ss_dssp EEEEEETBTTTBHCHHHHHHHHHHHHHHHHCCGEEEEEE---SS-HHHHHHHHHHCT-EE---SEEEETT----------
T ss_pred EEEEEECCCCCcCCCHHHHHHHHHHHHHhhCCCceEEEEC--CCCHHHHHHHHHhCCCCCC--CEEEecC----------
Confidence 57999999999943322 2222233332335666677777 9999999999999888643 4556554
Q ss_pred CchhhhhcCCeEEEeecCcccc----------------hhhccC-CccccCCCCC----CCEEEecCCCCCCCCCCCCCC
Q 021350 110 DDAWFAALGRSCIHMTWSDRGA----------------ISLEGL-GLKVVENVEE----ADFILAHGTEGMGLPSGDVRP 168 (313)
Q Consensus 110 ~~~~~~~~g~~~~~~~~~~~~~----------------~~l~~~-g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 168 (313)
|..+|+........ ..+.+. ++..-+.... ..+.+. .
T Consensus 69 --------Gt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~-------------~- 126 (247)
T PF05116_consen 69 --------GTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVD-------------P- 126 (247)
T ss_dssp --------TTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEE-------------T-
T ss_pred --------CeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEe-------------c-
Confidence 44444311000000 011110 1110000000 011111 1
Q ss_pred CCHHH-HHHHHHHHHhCCCcE--EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCc
Q 021350 169 MSLQD-LEKILEICASKKIPM--VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACD 245 (313)
Q Consensus 169 ~~~~~-~~~~l~~l~~~g~~~--i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~ 245 (313)
-.... +.++-..+.+.+... +.++...+. .-|...+|.+ +..++++++++++++
T Consensus 127 ~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ld---------------------ilP~~a~K~~--Al~~L~~~~~~~~~~ 183 (247)
T PF05116_consen 127 DDSADILEEIRARLRQRGLRVNVIYSNGRDLD---------------------ILPKGASKGA--ALRYLMERWGIPPEQ 183 (247)
T ss_dssp TSHCHHHHHHHHHHHCCTCEEEEEECTCCEEE---------------------EEETT-SHHH--HHHHHHHHHT--GGG
T ss_pred ccchhHHHHHHHHHHHcCCCeeEEEccceeEE---------------------EccCCCCHHH--HHHHHHHHhCCCHHH
Confidence 11222 444444556677765 344432211 1133455666 999999999999999
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 246 SIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 246 ~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
++++|||. ||+.|. ..+..+|.|.-
T Consensus 184 vl~aGDSg-ND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 184 VLVAGDSG-NDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp EEEEESSG-GGHHHH-CCSSEEEE-TT
T ss_pred EEEEeCCC-CcHHHH-cCcCCEEEEcC
Confidence 99999996 999999 67778887765
No 121
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.77 E-value=3.6e-08 Score=83.18 Aligned_cols=89 Identities=10% Similarity=0.075 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcC--------------------ceeecCCCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGG--------------------EVRWMGKPD 228 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~--------------------~~~~~gKP~ 228 (313)
++++.++++.|+++|+++ ++||............+ .+...++. .+. .....|.++
T Consensus 74 ~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 74 DPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 356888888888888887 77876543221110001 11122221 110 112344445
Q ss_pred HHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 021350 229 KIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQ 266 (313)
Q Consensus 229 ~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~ 266 (313)
+.+++.+.++. ++++++|||+. +|+.+|+++++-
T Consensus 151 ~~~~~~~~~~~---~~~~i~iGD~~-~D~~aa~~~d~~ 184 (188)
T TIGR01489 151 GKVIHKLSEPK---YQHIIYIGDGV-TDVCPAKLSDVV 184 (188)
T ss_pred HHHHHHHHhhc---CceEEEECCCc-chhchHhcCCcc
Confidence 66888887765 89999999996 999999998653
No 122
>PLN02423 phosphomannomutase
Probab=98.75 E-value=1.1e-07 Score=84.36 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=42.5
Q ss_pred CccEEE-EeccceeecCCccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHh
Q 021350 29 RFKAWL-LDQFGVLHDGKKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKS 84 (313)
Q Consensus 29 ~~k~ii-fDlDGTL~~~~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~ 84 (313)
+++.++ ||+||||+++.+-+ +.+.++|++|++. +.++++| ||....+.+.+..
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-i~fviaT--GR~~~~~~~~~~~ 59 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-VTVGVVG--GSDLSKISEQLGK 59 (245)
T ss_pred ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-CEEEEEC--CcCHHHHHHHhcc
Confidence 577666 99999999987654 6788999999976 9999999 8866666666653
No 123
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.73 E-value=2e-07 Score=82.53 Aligned_cols=48 Identities=21% Similarity=0.225 Sum_probs=41.1
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHc-------CCcEEEEcCCC
Q 021350 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA-------GIQSVFIIGGI 274 (313)
Q Consensus 224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~a-------G~~~i~V~~G~ 274 (313)
..|+. .++.++++++++++++++|||+. +|+.+++.+ |..++.|..|.
T Consensus 166 ~~Kg~--a~~~~~~~~~~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~~g~ 220 (244)
T TIGR00685 166 VNKGE--IVKRLLWHQPGSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIGSGS 220 (244)
T ss_pred CCHHH--HHHHHHHhcccCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEecCC
Confidence 33444 99999999999999999999996 999999999 77888887653
No 124
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.71 E-value=3.3e-08 Score=82.73 Aligned_cols=92 Identities=22% Similarity=0.218 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHHH------hc---CceeecCCCCHHHHHHHHHHh
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEK------LG---GEVRWMGKPDKIIYKSAMAMV 239 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~~------~~---~~~~~~gKP~~~~~~~~~~~l 239 (313)
++++.+.++.++++|.++ ++|+....+...-...++...+ ...+.. .+ ..+...+..+...+...++++
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~~ 154 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEES 154 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHHh
Confidence 367888888888888888 6777554322211111111110 000000 00 001122333455888888889
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHc
Q 021350 240 GVDACDSIAVGDSLHHDIKGANAA 263 (313)
Q Consensus 240 gv~~~~~v~IGDs~~~Di~~a~~a 263 (313)
+++++++++|||+. +|+.+++.+
T Consensus 155 ~~~~~~~~~iGDs~-~D~~~~~~a 177 (177)
T TIGR01488 155 KITLKKIIAVGDSV-NDLPMLKLA 177 (177)
T ss_pred CCCHHHEEEEeCCH-HHHHHHhcC
Confidence 99999999999996 999999864
No 125
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.68 E-value=2.9e-08 Score=85.06 Aligned_cols=99 Identities=17% Similarity=0.162 Sum_probs=64.3
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHH-----HhcCc---eeecCCCCHHHHHHHHHHh
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFE-----KLGGE---VRWMGKPDKIIYKSAMAMV 239 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~-----~~~~~---~~~~gKP~~~~~~~~~~~l 239 (313)
.++++.+.++.++++|.++ ++|+....+...-...++...+ ..-+. ...++ +...|+++...++.++++.
T Consensus 88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~ 167 (202)
T TIGR01490 88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAEE 167 (202)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHHc
Confidence 3578899999998999888 7887554322211111111111 11010 01111 2234566777899999999
Q ss_pred CCCCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350 240 GVDACDSIAVGDSLHHDIKGANAAGIQSVF 269 (313)
Q Consensus 240 gv~~~~~v~IGDs~~~Di~~a~~aG~~~i~ 269 (313)
++++++|+++||+. +|+.+++.+|...+.
T Consensus 168 ~~~~~~~~~~gDs~-~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 168 QIDLKDSYAYGDSI-SDLPLLSLVGHPYVV 196 (202)
T ss_pred CCCHHHcEeeeCCc-ccHHHHHhCCCcEEe
Confidence 99999999999996 999999999966543
No 126
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.59 E-value=1.2e-07 Score=81.69 Aligned_cols=94 Identities=14% Similarity=0.072 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH---h-c-Cc---eeecCCCCHHHHHHHHHHhCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK---L-G-GE---VRWMGKPDKIIYKSAMAMVGV 241 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~---~-~-~~---~~~~gKP~~~~~~~~~~~lgv 241 (313)
++++.+.++.+++++ ++ ++|++...+...-...++.. ..+.. . + +. .....||.+......+++.+.
T Consensus 70 ~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~---~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~ 145 (203)
T TIGR02137 70 LEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP---TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 145 (203)
T ss_pred CccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc---hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCC
Confidence 578888888888775 55 78876543322111111111 11110 0 1 10 111345666655555566653
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 242 DACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
+|++|||+. ||+.+++++|...++-..
T Consensus 146 ---~~v~vGDs~-nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 146 ---RVIAAGDSY-NDTTMLSEAHAGILFHAP 172 (203)
T ss_pred ---CEEEEeCCH-HHHHHHHhCCCCEEecCC
Confidence 899999996 999999999988777655
No 127
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.53 E-value=2.3e-07 Score=79.77 Aligned_cols=82 Identities=21% Similarity=0.232 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCce---eec--CCCCHHHHHHHHHHhCCCC
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV---RWM--GKPDKIIYKSAMAMVGVDA 243 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~--gKP~~~~~~~~~~~lgv~~ 243 (313)
.++++.+++..|++.|+++ ++|+..... .......+|... ... +||++.+|..+++++++++
T Consensus 128 ~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~------------a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~ 195 (215)
T PF00702_consen 128 LRPGAKEALQELKEAGIKVAILTGDNEST------------ASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKP 195 (215)
T ss_dssp BHTTHHHHHHHHHHTTEEEEEEESSEHHH------------HHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTG
T ss_pred chhhhhhhhhhhhccCcceeeeecccccc------------ccccccccccccccccccccccccchhHHHHHHHHhcCC
Confidence 4689999999999999988 777643311 112223344421 111 5999999999999999999
Q ss_pred CcEEEEcCCchhhHHHHHHcC
Q 021350 244 CDSIAVGDSLHHDIKGANAAG 264 (313)
Q Consensus 244 ~~~v~IGDs~~~Di~~a~~aG 264 (313)
++|+||||++ ||+.|+++||
T Consensus 196 ~~v~~vGDg~-nD~~al~~Ag 215 (215)
T PF00702_consen 196 GEVAMVGDGV-NDAPALKAAG 215 (215)
T ss_dssp GGEEEEESSG-GHHHHHHHSS
T ss_pred CEEEEEccCH-HHHHHHHhCc
Confidence 9999999998 9999999997
No 128
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.42 E-value=2.8e-06 Score=75.81 Aligned_cols=61 Identities=31% Similarity=0.475 Sum_probs=47.5
Q ss_pred CccEEEEeccceeecCC---------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHH
Q 021350 29 RFKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTID 80 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~---------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~ 80 (313)
+..+|+||+|+|+++.. .++||+.++++.|+++|+++.++||.... .+....
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~ 153 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK 153 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence 56799999999997522 25789999999999999999999986643 345667
Q ss_pred HHHhCCCCC
Q 021350 81 KLKSLGFDP 89 (313)
Q Consensus 81 ~l~~~G~~~ 89 (313)
.|+.+|++.
T Consensus 154 ~Lkk~Gi~~ 162 (266)
T TIGR01533 154 NLKRFGFPQ 162 (266)
T ss_pred HHHHcCcCC
Confidence 777778763
No 129
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.42 E-value=4.2e-07 Score=81.16 Aligned_cols=68 Identities=18% Similarity=0.273 Sum_probs=55.8
Q ss_pred CccEEEEeccceeecCCcc----CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 29 RFKAWLLDQFGVLHDGKKP----YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~----~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
.++.|+||+||||++.++. -|++.++|.+|+++|+++.++||++ .+.+...++.+|+.... +.+++.+
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~--Re~v~~~L~~lGLd~YF-dvIIs~G 196 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGD--RDHVVESMRKVKLDRYF-DIIISGG 196 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEECCC--HHHHHHHHHHcCCCccc-CEEEECC
Confidence 5789999999999998764 3899999999999999999999765 44555789999998655 5555554
No 130
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.39 E-value=5.7e-06 Score=85.18 Aligned_cols=54 Identities=26% Similarity=0.313 Sum_probs=44.8
Q ss_pred CccEEEEeccceeecCC----ccCccHHHHHHHH-HHCCCcEEEEeCCCCCchHHHHHHHh
Q 021350 29 RFKAWLLDQFGVLHDGK----KPYPGAISTLEML-ATTGAKMVVISNSSRRASTTIDKLKS 84 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~----~~~~~a~~~l~~l-~~~g~~~~~~Tn~~~~~~~~~~~l~~ 84 (313)
+.++|++|+||||+... .+-++..+.|++| ...|..++++| ||..+++.+.+..
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS--GR~~~~L~~~f~~ 653 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS--ARSRKTLADWFSP 653 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe--CCCHHHHHHHhCC
Confidence 56899999999999644 3446788999998 56899999999 9988888888864
No 131
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.35 E-value=2.1e-06 Score=71.32 Aligned_cols=48 Identities=15% Similarity=0.268 Sum_probs=35.1
Q ss_pred HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
..|..+.+..|++.++++.|-|.. ..+.-..+.|+.+++|..|.+...
T Consensus 111 ~Hf~~i~~~tgI~y~eMlFFDDe~-~N~~~v~~lGV~~v~v~~Glt~~~ 158 (169)
T PF12689_consen 111 THFRRIHRKTGIPYEEMLFFDDES-RNIEVVSKLGVTCVLVPDGLTWDE 158 (169)
T ss_dssp HHHHHHHHHH---GGGEEEEES-H-HHHHHHHTTT-EEEE-SSS--HHH
T ss_pred HHHHHHHHhcCCChhHEEEecCch-hcceeeEecCcEEEEeCCCCCHHH
Confidence 379999999999999999999995 778888899999999999887543
No 132
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.32 E-value=6.4e-06 Score=84.11 Aligned_cols=56 Identities=25% Similarity=0.175 Sum_probs=45.3
Q ss_pred CccEEEEeccceeecCC------ccCccHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHhCC
Q 021350 29 RFKAWLLDQFGVLHDGK------KPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLG 86 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~------~~~~~a~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~l~~~G 86 (313)
+.++|+||+||||++.. .+.+.+.++|++|.+ .|..++++| ||....+.+.+..++
T Consensus 491 ~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivS--GR~~~~l~~~~~~~~ 553 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIIS--GRDRDTLERWFGDLP 553 (726)
T ss_pred cceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEe--CCCHHHHHHHhCCCC
Confidence 67999999999999732 244678899999999 599999999 888888877765443
No 133
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.27 E-value=7.5e-06 Score=67.42 Aligned_cols=101 Identities=12% Similarity=0.146 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS 246 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~ 246 (313)
-.|++.-+.++.-++.|+++ |.|++..-.+.---.+...|.+.++|.. +.. +.-+|-.-..|..+++..|++|.++
T Consensus 103 hlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt--tiG~KrE~~SY~kIa~~iGl~p~ei 180 (229)
T COG4229 103 HLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT--TIGKKRESQSYAKIAGDIGLPPAEI 180 (229)
T ss_pred ccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec--cccccccchhHHHHHHhcCCCchhe
Confidence 34788888888888999998 5555554221100012334445555543 211 2334777778999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 247 IAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
+++.|++ ..+.+|+.+|+.++++.+
T Consensus 181 lFLSDn~-~EL~AA~~vGl~t~l~~R 205 (229)
T COG4229 181 LFLSDNP-EELKAAAGVGLATGLAVR 205 (229)
T ss_pred EEecCCH-HHHHHHHhcchheeeeec
Confidence 9999997 999999999999988876
No 134
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.24 E-value=3.5e-06 Score=72.97 Aligned_cols=98 Identities=20% Similarity=0.222 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchH-HHHHHH----hcC---ceeecCCCCHHHHHHHHHHhCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTL-ASKFEK----LGG---EVRWMGKPDKIIYKSAMAMVGV 241 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~-~~~~~~----~~~---~~~~~gKP~~~~~~~~~~~lgv 241 (313)
+++..+.+..+++.|.++ ++|.+...+...-...++.... ...++. +++ .+...++-+...+..+++.+|+
T Consensus 79 ~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~ 158 (212)
T COG0560 79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGI 158 (212)
T ss_pred CccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCC
Confidence 478888888889999888 6665433221111011111111 111110 111 1233445566688899999999
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEE
Q 021350 242 DACDSIAVGDSLHHDIKGANAAGIQSVF 269 (313)
Q Consensus 242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~ 269 (313)
++++++++||+. ||+.|.+.+|...++
T Consensus 159 ~~~~~~a~gDs~-nDlpml~~ag~~ia~ 185 (212)
T COG0560 159 PLEETVAYGDSA-NDLPMLEAAGLPIAV 185 (212)
T ss_pred CHHHeEEEcCch-hhHHHHHhCCCCeEe
Confidence 999999999995 999999999965544
No 135
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.20 E-value=4.2e-06 Score=66.12 Aligned_cols=45 Identities=24% Similarity=0.284 Sum_probs=36.3
Q ss_pred cEEEEeccceeecCC-c------cCccHHHHHHHHHHCCCcEEEEeCCCCCchH
Q 021350 31 KAWLLDQFGVLHDGK-K------PYPGAISTLEMLATTGAKMVVISNSSRRAST 77 (313)
Q Consensus 31 k~iifDlDGTL~~~~-~------~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~ 77 (313)
|+|+||+||||.+.+ . +.+++.+++++++++|+.++++| +|+...
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaT--GR~~~~ 53 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISS--SRNMRT 53 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEEC--CCCchh
Confidence 799999999998753 1 34678888888899999999999 665543
No 136
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.15 E-value=3.9e-06 Score=75.10 Aligned_cols=68 Identities=19% Similarity=0.228 Sum_probs=55.0
Q ss_pred CccEEEEeccceeecCCcc----CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 29 RFKAWLLDQFGVLHDGKKP----YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~----~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
.++.|+||+||||+++++- -|++.++|.+|+++|+++.++||+. .+.+...++.+|+.... +-+++++
T Consensus 127 ~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~--Re~v~~~Le~lgL~~yF-DvII~~g 198 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYGN--REHVVHSLKETKLEGYF-DIIICGG 198 (303)
T ss_pred eccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCCC--hHHHHHHHHHcCCCccc-cEEEECC
Confidence 5689999999999998765 3889999999999999999999765 34556778889997554 5555554
No 137
>PRK08238 hypothetical protein; Validated
Probab=98.11 E-value=3.2e-05 Score=74.89 Aligned_cols=93 Identities=13% Similarity=0.048 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcEEEE
Q 021350 172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAV 249 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~I 249 (313)
+++.+.++.++++|.++ ++|+.+......-...++ +++. .+.+.....||++.. ..+.+.++ .++++++
T Consensus 75 pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lG------lFd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~yv 145 (479)
T PRK08238 75 EEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLG------LFDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFDYA 145 (479)
T ss_pred hhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC------CCCEEEeCCCccccCCchHH-HHHHHHhC--ccCeeEe
Confidence 78999999999999998 888866532221100010 0222 233333445665443 33445565 4669999
Q ss_pred cCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 250 GDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 250 GDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
||+. +|+.+++.+| ..+.|..+..
T Consensus 146 GDS~-~Dlp~~~~A~-~av~Vn~~~~ 169 (479)
T PRK08238 146 GNSA-ADLPVWAAAR-RAIVVGASPG 169 (479)
T ss_pred cCCH-HHHHHHHhCC-CeEEECCCHH
Confidence 9996 9999999999 8889987643
No 138
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.10 E-value=5.8e-06 Score=68.15 Aligned_cols=51 Identities=16% Similarity=0.226 Sum_probs=41.0
Q ss_pred EEEEeccceeecCC------------ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHH---HHHHHh
Q 021350 32 AWLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTT---IDKLKS 84 (313)
Q Consensus 32 ~iifDlDGTL~~~~------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~---~~~l~~ 84 (313)
.|+||+||||+++. ...|++.+++++++++|++++++| +|+...+ .+.+.+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~T--GRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLT--ARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEc--CCcHHHHHHHHHHHHH
Confidence 48999999999986 456899999999999999999999 6664333 345544
No 139
>PLN02580 trehalose-phosphatase
Probab=98.06 E-value=0.00022 Score=66.73 Aligned_cols=54 Identities=19% Similarity=0.095 Sum_probs=41.6
Q ss_pred cEEEEeccceeec------CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350 31 KAWLLDQFGVLHD------GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF 87 (313)
Q Consensus 31 k~iifDlDGTL~~------~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~ 87 (313)
-++++|.||||.. .-.+.++..++|+.|.+.. ++.++| ||..+++.+.+.-.++
T Consensus 120 ~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~-~VAIVS--GR~~~~L~~~l~~~~l 179 (384)
T PLN02580 120 IALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYF-PTAIIS--GRSRDKVYELVGLTEL 179 (384)
T ss_pred eEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCC-CEEEEe--CCCHHHHHHHhCCCCc
Confidence 5788899999975 2234567888999998874 799999 9988888877754444
No 140
>PLN03017 trehalose-phosphatase
Probab=98.04 E-value=0.00022 Score=66.28 Aligned_cols=49 Identities=18% Similarity=0.135 Sum_probs=39.3
Q ss_pred cEEEEeccceee---c-CC--ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHH
Q 021350 31 KAWLLDQFGVLH---D-GK--KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL 82 (313)
Q Consensus 31 k~iifDlDGTL~---~-~~--~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l 82 (313)
-+|++|+||||. + .. .+.++..++|++|. ++.++.++| ||....+.+.+
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvS--GR~~~~l~~~~ 166 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVT--GRCIDKVYNFV 166 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEe--CCCHHHHHHhh
Confidence 568889999999 3 33 35678899999999 788999999 88887776654
No 141
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.97 E-value=1.7e-05 Score=73.18 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhcc-C----CchHHHHHHHh---cCceee---------------cCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRV-M----PGTLASKFEKL---GGEVRW---------------MGK 226 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~-~----~g~~~~~~~~~---~~~~~~---------------~gK 226 (313)
.+++.++|..++++|.++ ++||.+......--..+ + ...+...|+.+ ..+|.+ ..|
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 578999999999999998 89998764332111011 1 01123333321 111110 001
Q ss_pred CCH------------HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEcCCC
Q 021350 227 PDK------------IIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN-AAGIQSVFIIGGI 274 (313)
Q Consensus 227 P~~------------~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~-~aG~~~i~V~~G~ 274 (313)
+.. .....+.+.+|+++++++||||++.+||.+++ .+||+|++|....
T Consensus 266 ~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL 326 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPEL 326 (343)
T ss_pred CCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhH
Confidence 111 12567788899999999999999999999998 9999999998733
No 142
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.89 E-value=0.00025 Score=60.38 Aligned_cols=58 Identities=22% Similarity=0.186 Sum_probs=46.8
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
...+|+.|+||||+.-.--...|...+..|++.|.+++++| +.+..++...-+.+|++
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~~S--SKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVILCS--SKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEEec--cchHHHHHHHHHhcCCC
Confidence 56789999999999822224568889999999999999988 66677777777788887
No 143
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.86 E-value=0.00015 Score=58.10 Aligned_cols=107 Identities=23% Similarity=0.216 Sum_probs=72.3
Q ss_pred CCCCHHHHHHHHHHHHhC-C-Cc-EEEEcCCccccccchhccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHH-hC-
Q 021350 167 RPMSLQDLEKILEICASK-K-IP-MVVANPDYVTVEARALRVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAM-VG- 240 (313)
Q Consensus 167 ~~~~~~~~~~~l~~l~~~-g-~~-~i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~-lg- 240 (313)
..+.++ ..+-++.|+.. | .- +++||.--....++ .++.++.++. .|......++-+|..-....+. +|
T Consensus 60 ~~Iwp~-~l~~ie~~~~vygek~i~v~SNsaG~~~~D~-----d~s~Ak~le~k~gIpVlRHs~kKP~ct~E~~~y~~~N 133 (190)
T KOG2961|consen 60 LAIWPP-LLPSIERCKAVYGEKDIAVFSNSAGLTEYDH-----DDSKAKALEAKIGIPVLRHSVKKPACTAEEVEYHFGN 133 (190)
T ss_pred cccCch-hHHHHHHHHHHhCcccEEEEecCcCccccCC-----chHHHHHHHHhhCCceEeecccCCCccHHHHHHHhCC
Confidence 334443 34444555543 3 33 37787443222222 2466777775 6777666666665566665554 35
Q ss_pred ---CCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 241 ---VDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 241 ---v~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
-.+++++||||++.+||.+|+.+|.-+||+..|....+.
T Consensus 134 shv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~n 175 (190)
T KOG2961|consen 134 SHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEEN 175 (190)
T ss_pred cccCChhHeEEEccchhhhHhhhhhccceeEEecccccccch
Confidence 589999999999999999999999999999999987765
No 144
>PLN02151 trehalose-phosphatase
Probab=97.78 E-value=0.0012 Score=61.12 Aligned_cols=54 Identities=20% Similarity=0.111 Sum_probs=41.3
Q ss_pred cEEEEeccceee----cCC--ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350 31 KAWLLDQFGVLH----DGK--KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF 87 (313)
Q Consensus 31 k~iifDlDGTL~----~~~--~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~ 87 (313)
-++++|.||||. +-. .+.+++.++|+.|. .+.++.++| ||..+.+.+.+.-.++
T Consensus 99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvS--GR~~~~l~~~~~~~~l 158 (354)
T PLN02151 99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVS--GRCREKVSSFVKLTEL 158 (354)
T ss_pred eEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEE--CCCHHHHHHHcCCccc
Confidence 578899999999 323 45578889999998 456899999 9888888777653333
No 145
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=97.76 E-value=1.9e-05 Score=65.45 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=32.6
Q ss_pred HHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350 232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFII 271 (313)
Q Consensus 232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~ 271 (313)
|.+.+.++|.++++||+|||+. .|+.++.++|+....-.
T Consensus 101 ~~K~L~~l~~~~~~vIiVDD~~-~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 101 YVKDLSLVGKDLSKVIIIDNSP-YSYSLQPDNAIPIKSWF 139 (162)
T ss_pred EEeEchhcCCChhhEEEEeCCh-hhhccCccCEeecCCCC
Confidence 5666778899999999999996 99999999997655544
No 146
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.72 E-value=0.00012 Score=65.46 Aligned_cols=91 Identities=13% Similarity=0.135 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCC---c-h-HHHHHHHhcCceeecCCCCH---------HHHHHH
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMP---G-T-LASKFEKLGGEVRWMGKPDK---------IIYKSA 235 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~---g-~-~~~~~~~~~~~~~~~gKP~~---------~~~~~~ 235 (313)
.+++.+.+..|+++|+++ ++|++-......-...++. . . +++.+. +..+....|||.| .+++.+
T Consensus 123 ~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~-f~~dGvltG~~~P~i~~~~K~~~v~~~~ 201 (277)
T TIGR01544 123 KDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMD-FDEDGVLKGFKGPLIHTFNKNHDVALRN 201 (277)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEE-ECCCCeEeCCCCCcccccccHHHHHHHH
Confidence 378999999999999999 7787543211110000000 0 0 011111 1123456778888 778889
Q ss_pred HHHhC--CCCCcEEEEcCCchhhHHHHHHc
Q 021350 236 MAMVG--VDACDSIAVGDSLHHDIKGANAA 263 (313)
Q Consensus 236 ~~~lg--v~~~~~v~IGDs~~~Di~~a~~a 263 (313)
++.++ .++++|++|||+. +|+.||.-.
T Consensus 202 ~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~ 230 (277)
T TIGR01544 202 TEYFNQLKDRSNIILLGDSQ-GDLRMADGV 230 (277)
T ss_pred HHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence 99998 8999999999997 999997633
No 147
>PRK11590 hypothetical protein; Provisional
Probab=97.69 E-value=0.00018 Score=62.13 Aligned_cols=98 Identities=12% Similarity=-0.000 Sum_probs=52.5
Q ss_pred HHHHHHHH-HHHHhCCCcE-EEEcCCccccccchhccC----CchHHHHHH-HhcCceeecCCCCH--HHHHHHHHHhCC
Q 021350 171 LQDLEKIL-EICASKKIPM-VVANPDYVTVEARALRVM----PGTLASKFE-KLGGEVRWMGKPDK--IIYKSAMAMVGV 241 (313)
Q Consensus 171 ~~~~~~~l-~~l~~~g~~~-i~tn~d~~~~~~~~~~~~----~g~~~~~~~-~~~~~~~~~gKP~~--~~~~~~~~~lgv 241 (313)
++++.+.+ ..+++.|.++ ++||....+...-...++ ...+..-++ ..++. ..|.+.- +=...+.+.++.
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~--~~g~~c~g~~K~~~l~~~~~~ 174 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGW--VLTLRCLGHEKVAQLERKIGT 174 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccE--ECCccCCChHHHHHHHHHhCC
Confidence 67888888 5677788887 788865533221100001 000000000 01111 1122111 012233344577
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 242 DACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
+.+.+.+-|||. +|+.+...+| ..+.|..
T Consensus 175 ~~~~~~aY~Ds~-~D~pmL~~a~-~~~~vnp 203 (211)
T PRK11590 175 PLRLYSGYSDSK-QDNPLLYFCQ-HRWRVTP 203 (211)
T ss_pred CcceEEEecCCc-ccHHHHHhCC-CCEEECc
Confidence 888999999996 9999999999 5555543
No 148
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=97.59 E-value=0.002 Score=59.37 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=42.5
Q ss_pred CccEEEEeccceeecCCccCc---cHHHHHHHHHHCCCcEEEEeCCCCC-chHHHHHHH
Q 021350 29 RFKAWLLDQFGVLHDGKKPYP---GAISTLEMLATTGAKMVVISNSSRR-ASTTIDKLK 83 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~---~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~~l~ 83 (313)
..+.|.||=|+||++...-+. .....|-+|.++|+.+.++|-.|-+ .+.+.++|.
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL~ 204 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERLH 204 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHHH
Confidence 578999999999999665542 3556777888999999999987754 345666665
No 149
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.44 E-value=0.00023 Score=59.50 Aligned_cols=88 Identities=10% Similarity=0.073 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhCCCcE-EEEcCCcccc--ccchhccC-CchHHHHHHH--hcC-------ceeecCCCCHHHHHHHHHH
Q 021350 172 QDLEKILEICASKKIPM-VVANPDYVTV--EARALRVM-PGTLASKFEK--LGG-------EVRWMGKPDKIIYKSAMAM 238 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~--~~~~~~~~-~g~~~~~~~~--~~~-------~~~~~gKP~~~~~~~~~~~ 238 (313)
+++++.+..|+++|..+ ++|.+-+.+. ....+-+. ...+++.+.. .|. +++.-|-.++.++....+
T Consensus 91 ~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk- 169 (227)
T KOG1615|consen 91 PGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRK- 169 (227)
T ss_pred CCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHh-
Confidence 68899999999999988 5555443221 11111111 1122332221 111 233333333348888777
Q ss_pred hCCCCCcEEEEcCCchhhHHHHHH
Q 021350 239 VGVDACDSIAVGDSLHHDIKGANA 262 (313)
Q Consensus 239 lgv~~~~~v~IGDs~~~Di~~a~~ 262 (313)
+++-+.++||||.- ||+++..-
T Consensus 170 -~~~~~~~~mvGDGa-tDlea~~p 191 (227)
T KOG1615|consen 170 -NYNYKTIVMVGDGA-TDLEAMPP 191 (227)
T ss_pred -CCChheeEEecCCc-cccccCCc
Confidence 88889999999996 99987654
No 150
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.40 E-value=0.00068 Score=67.27 Aligned_cols=90 Identities=14% Similarity=0.073 Sum_probs=60.5
Q ss_pred CCCCHHHHHHHHHHHHhCC-CcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCC
Q 021350 167 RPMSLQDLEKILEICASKK-IPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDAC 244 (313)
Q Consensus 167 ~~~~~~~~~~~l~~l~~~g-~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~ 244 (313)
....++++.++++.|+++| +++ ++|++... ......+.++....+. .-.|.-=..+.++++..++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~------------~a~~i~~~lgi~~~f~-~~~p~~K~~~v~~l~~~~~ 448 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRS------------AAEAVAAELGIDEVHA-ELLPEDKLAIVKELQEEGG 448 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHH------------HHHHHHHHhCCCeeec-cCCHHHHHHHHHHHHHcCC
Confidence 3446799999999999999 888 78875542 1222334444432221 1122222345555555778
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 245 DSIAVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
+|+||||+. +|+.++++|| +.|.+|
T Consensus 449 ~v~~vGDg~-nD~~al~~A~---vgia~g 473 (556)
T TIGR01525 449 VVAMVGDGI-NDAPALAAAD---VGIAMG 473 (556)
T ss_pred EEEEEECCh-hHHHHHhhCC---EeEEeC
Confidence 999999996 9999999999 677777
No 151
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.37 E-value=0.00082 Score=66.36 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHHHHHhCCC-cE-EEEcCCccccccchhccCCchHHHHHHHhcCceeec-CCCCHHHHHHHHHHhCCCCC
Q 021350 168 PMSLQDLEKILEICASKKI-PM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWM-GKPDKIIYKSAMAMVGVDAC 244 (313)
Q Consensus 168 ~~~~~~~~~~l~~l~~~g~-~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-gKP~~~~~~~~~~~lgv~~~ 244 (313)
...++++.++++.|+++|+ ++ ++|++..... ....+.++....+. -.|. --..+.++++-..+
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a------------~~i~~~lgi~~~f~~~~p~--~K~~~i~~l~~~~~ 426 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVA------------ERVARELGIDEVHAELLPE--DKLEIVKELREKYG 426 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHH------------HHHHHHcCChhhhhccCcH--HHHHHHHHHHhcCC
Confidence 3457999999999999999 88 7787554221 12222233221111 1232 22446666666679
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
+++||||+. +|+.+++++| +.|..|..
T Consensus 427 ~v~~vGDg~-nD~~al~~A~---vgia~g~~ 453 (536)
T TIGR01512 427 PVAMVGDGI-NDAPALAAAD---VGIAMGAS 453 (536)
T ss_pred EEEEEeCCH-HHHHHHHhCC---EEEEeCCC
Confidence 999999996 9999999999 46777743
No 152
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.34 E-value=0.00054 Score=59.69 Aligned_cols=59 Identities=24% Similarity=0.450 Sum_probs=47.8
Q ss_pred CccEEEEeccceeecCC---------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCCCc---hHH
Q 021350 29 RFKAWLLDQFGVLHDGK---------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRA---STT 78 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~---------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~---~~~ 78 (313)
..++++||+|.|+++.. +++|++.++++.++++|+.++++| +|+. +..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lT--GR~e~~r~~T 153 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLS--GRWEELRNAT 153 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEc--CCChHHHHHH
Confidence 67899999999987621 357889999999999999999999 5543 235
Q ss_pred HHHHHhCCCCC
Q 021350 79 IDKLKSLGFDP 89 (313)
Q Consensus 79 ~~~l~~~G~~~ 89 (313)
.+.|.+.|++.
T Consensus 154 ~~nL~~~G~~~ 164 (229)
T TIGR01675 154 LDNLINAGFTG 164 (229)
T ss_pred HHHHHHcCCCC
Confidence 78888899874
No 153
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.21 E-value=0.00031 Score=61.56 Aligned_cols=61 Identities=21% Similarity=0.297 Sum_probs=49.6
Q ss_pred CccEEEEeccceeecC---------------------------CccCccHHHHHHHHHHCCCcEEEEeCCCCC-chHHHH
Q 021350 29 RFKAWLLDQFGVLHDG---------------------------KKPYPGAISTLEMLATTGAKMVVISNSSRR-ASTTID 80 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~---------------------------~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~-~~~~~~ 80 (313)
+..+|+||+|+|+++. ...+|++.++++.++++|..++++||.... .+...+
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~ 150 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEK 150 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHH
Confidence 6889999999997651 246899999999999999999999974433 345678
Q ss_pred HHHhCCCCC
Q 021350 81 KLKSLGFDP 89 (313)
Q Consensus 81 ~l~~~G~~~ 89 (313)
.|++.|+..
T Consensus 151 nL~~~G~~~ 159 (229)
T PF03767_consen 151 NLKKAGFPG 159 (229)
T ss_dssp HHHHHTTST
T ss_pred HHHHcCCCc
Confidence 889999864
No 154
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.13 E-value=0.001 Score=59.19 Aligned_cols=61 Identities=18% Similarity=0.322 Sum_probs=47.3
Q ss_pred CccEEEEeccceeec----------------------------CCccCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHH
Q 021350 29 RFKAWLLDQFGVLHD----------------------------GKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTI 79 (313)
Q Consensus 29 ~~k~iifDlDGTL~~----------------------------~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~ 79 (313)
..++++||+|+|+++ ..+++|++.++.+.+++.|++++++||..... +...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 458999999999873 12357889999999999999999999543222 3457
Q ss_pred HHHHhCCCCC
Q 021350 80 DKLKSLGFDP 89 (313)
Q Consensus 80 ~~l~~~G~~~ 89 (313)
+.|++.|++.
T Consensus 180 ~NL~kaGy~~ 189 (275)
T TIGR01680 180 ANLKKAGYHT 189 (275)
T ss_pred HHHHHcCCCC
Confidence 7788889974
No 155
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.08 E-value=0.00099 Score=54.50 Aligned_cols=41 Identities=22% Similarity=0.325 Sum_probs=35.7
Q ss_pred EEEEeccceeecCC------------ccCccHHHHHHHHHHCCCcEEEEeCCCCC
Q 021350 32 AWLLDQFGVLHDGK------------KPYPGAISTLEMLATTGAKMVVISNSSRR 74 (313)
Q Consensus 32 ~iifDlDGTL~~~~------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~ 74 (313)
.|++|+||||..|+ ...+++.+.++++.++|++++++| +|+
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlT--aRp 53 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLT--ARP 53 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEEC--cCc
Confidence 38999999999974 356899999999999999999999 555
No 156
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=97.07 E-value=0.047 Score=48.74 Aligned_cols=58 Identities=24% Similarity=0.233 Sum_probs=43.3
Q ss_pred CccEEEEeccceeecC------CccCccHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 29 RFKAWLLDQFGVLHDG------KKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~------~~~~~~a~~~l~~l~~~g-~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+-.++++|.||||..- ..+.++..+.|+.|.+.. ..+.++| +|+.+++.+.+.-.|+.
T Consensus 17 ~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiS--GR~~~~l~~~~~v~~i~ 81 (266)
T COG1877 17 RKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIIS--GRSLAELERLFGVPGIG 81 (266)
T ss_pred cceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEe--CCCHHHHHHhcCCCCcc
Confidence 4589999999999882 223456788888888764 3577777 88888888877755553
No 157
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.02 E-value=0.003 Score=62.80 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
..+++..++++.|+++|+++ ++|++.... .....+.++.....--+|. --..+.+++.-++++|+
T Consensus 405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~------------a~~ia~~lgi~~~~~~~p~--~K~~~v~~l~~~~~~v~ 470 (562)
T TIGR01511 405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKT------------AKAVAKELGINVRAEVLPD--DKAALIKELQEKGRVVA 470 (562)
T ss_pred cccHHHHHHHHHHHHcCCeEEEEcCCCHHH------------HHHHHHHcCCcEEccCChH--HHHHHHHHHHHcCCEEE
Confidence 45789999999999999998 777754421 1122223333211111232 22334444544779999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
||||+. +|+.+++++|+ .|..|..
T Consensus 471 ~VGDg~-nD~~al~~A~v---gia~g~g 494 (562)
T TIGR01511 471 MVGDGI-NDAPALAQADV---GIAIGAG 494 (562)
T ss_pred EEeCCC-ccHHHHhhCCE---EEEeCCc
Confidence 999997 99999999995 4555543
No 158
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.97 E-value=0.011 Score=61.83 Aligned_cols=60 Identities=18% Similarity=0.375 Sum_probs=45.3
Q ss_pred CccEEEEecc---------ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCc
Q 021350 29 RFKAWLLDQF---------GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS 90 (313)
Q Consensus 29 ~~k~iifDlD---------GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~ 90 (313)
.++.+.|=.+ |.+.-.+++-|++.++++.|++.|+++.++| +..........+++|+...
T Consensus 502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miT--GD~~~tA~~ia~~~Gi~~~ 570 (884)
T TIGR01522 502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMIT--GDSQETAVSIARRLGMPSK 570 (884)
T ss_pred CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCCCC
Confidence 4566665433 4555577888999999999999999999999 5556666666788888643
No 159
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.93 E-value=0.022 Score=44.75 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=43.2
Q ss_pred cEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 31 k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
+...-+.++|+..+.++++.+.+.|+.|.+. +.++++| +-+.-.+.+.++-.|++.
T Consensus 15 d~~~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IAS--gDr~gsl~~lae~~gi~~ 70 (152)
T COG4087 15 DSKAGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIAS--GDRKGSLVQLAEFVGIPV 70 (152)
T ss_pred eeecceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEec--CCcchHHHHHHHHcCCce
Confidence 4566788999999999999999999999999 8888877 433445555555566653
No 160
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.75 E-value=0.0083 Score=62.49 Aligned_cols=92 Identities=13% Similarity=0.004 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
..+++..+.++.+++.|+++ ++|++.... .....+.++..... ..-.|+--..++++++..+++++
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~------------a~~ia~~lgi~~~~-~~~~p~~K~~~i~~l~~~~~~v~ 716 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTT------------ANAIAKEAGIDEVI-AGVLPDGKAEAIKRLQSQGRQVA 716 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHH------------HHHHHHHcCCCEEE-eCCCHHHHHHHHHHHhhcCCEEE
Confidence 34688899999999999988 677644411 11223334443322 22344455667778888889999
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHAT 277 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~ 277 (313)
||||+. ||+.+++++|+ .|..|..++
T Consensus 717 ~vGDg~-nD~~al~~Agv---gia~g~g~~ 742 (834)
T PRK10671 717 MVGDGI-NDAPALAQADV---GIAMGGGSD 742 (834)
T ss_pred EEeCCH-HHHHHHHhCCe---eEEecCCCH
Confidence 999996 99999999998 445554433
No 161
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.72 E-value=0.013 Score=61.49 Aligned_cols=50 Identities=18% Similarity=0.339 Sum_probs=38.2
Q ss_pred eeecCCCCHHHHHHHHHHhCCCCCcEEE-EcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 221 VRWMGKPDKIIYKSAMAMVGVDACDSIA-VGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~-IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
|...+|.. ++.+++.++|++++++++ +||+-.+|.+.. -.|.+.-.|+.|
T Consensus 952 P~~ASKgq--AlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~~tvi~~g 1002 (1050)
T TIGR02468 952 PLLASRSQ--ALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLHKTVILKG 1002 (1050)
T ss_pred eCCCCHHH--HHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCceeEEEEec
Confidence 44556776 999999999999999955 999973497766 356666666666
No 162
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.65 E-value=0.027 Score=49.34 Aligned_cols=49 Identities=27% Similarity=0.201 Sum_probs=37.7
Q ss_pred cCCCCHHHHHHHHHH---hCCCCCcEEEEcCCchhhHHHHHHcCC-cEEEEcCCCC
Q 021350 224 MGKPDKIIYKSAMAM---VGVDACDSIAVGDSLHHDIKGANAAGI-QSVFIIGGIH 275 (313)
Q Consensus 224 ~gKP~~~~~~~~~~~---lgv~~~~~v~IGDs~~~Di~~a~~aG~-~~i~V~~G~~ 275 (313)
+-|.. +++...+. -|++.+++++|||+. +|+=++.+.+- +.++.+.|+.
T Consensus 149 mCK~~--il~~~~~~~~~~g~~~~rviYiGDG~-nD~Cp~~~L~~~D~v~~R~~~~ 201 (234)
T PF06888_consen 149 MCKGK--ILERLLQEQAQRGVPYDRVIYIGDGR-NDFCPALRLRPRDVVFPRKGYP 201 (234)
T ss_pred cchHH--HHHHHHHHHhhcCCCcceEEEECCCC-CCcCcccccCCCCEEecCCCCh
Confidence 44554 66666655 478899999999995 99999998774 6788888865
No 163
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.56 E-value=0.013 Score=48.77 Aligned_cols=38 Identities=16% Similarity=0.139 Sum_probs=27.6
Q ss_pred eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC
Q 021350 221 VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI 265 (313)
Q Consensus 221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~ 265 (313)
..+.-||. ...... -+++.++|+||+. +|+.+|+....
T Consensus 143 ~fG~dK~~--vI~~l~----e~~e~~fy~GDsv-sDlsaaklsDl 180 (220)
T COG4359 143 QFGHDKSS--VIHELS----EPNESIFYCGDSV-SDLSAAKLSDL 180 (220)
T ss_pred ccCCCcch--hHHHhh----cCCceEEEecCCc-ccccHhhhhhh
Confidence 34455666 554444 4677899999998 99999997763
No 164
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.40 E-value=0.0084 Score=51.82 Aligned_cols=99 Identities=13% Similarity=-0.032 Sum_probs=51.3
Q ss_pred CHHHHHHHHH-HHHhCCCcE-EEEcCCccccccc--hhc-cC-CchHHHHHHHhcCceeecCCCCHH--HHHHHHHHhCC
Q 021350 170 SLQDLEKILE-ICASKKIPM-VVANPDYVTVEAR--ALR-VM-PGTLASKFEKLGGEVRWMGKPDKI--IYKSAMAMVGV 241 (313)
Q Consensus 170 ~~~~~~~~l~-~l~~~g~~~-i~tn~d~~~~~~~--~~~-~~-~g~~~~~~~~~~~~~~~~gKP~~~--~~~~~~~~lgv 241 (313)
.++++.+.++ .++++|..+ ++||....+...- ..- .. ...+..-++.-.+ ....|.+.-. =...+.+.++.
T Consensus 95 l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~g-g~~~g~~c~g~~Kv~rl~~~~~~ 173 (210)
T TIGR01545 95 AFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNG-GWVLPLRCLGHEKVAQLEQKIGS 173 (210)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCC-ceEcCccCCChHHHHHHHHHhCC
Confidence 3678888885 677789888 7888654332110 000 00 0000000110000 1112221110 12223334466
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEc
Q 021350 242 DACDSIAVGDSLHHDIKGANAAGIQSVFII 271 (313)
Q Consensus 242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~ 271 (313)
+.+.+.+-|||. +|+.+...+|- .+.|.
T Consensus 174 ~~~~~~aYsDS~-~D~pmL~~a~~-~~~Vn 201 (210)
T TIGR01545 174 PLKLYSGYSDSK-QDNPLLAFCEH-RWRVS 201 (210)
T ss_pred ChhheEEecCCc-ccHHHHHhCCC-cEEEC
Confidence 778899999996 99999999994 44443
No 165
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=96.32 E-value=0.025 Score=49.63 Aligned_cols=43 Identities=9% Similarity=-0.030 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCC---CCcEEEEcCCchhhHHHHHHcCCc-----EEEEcCCC
Q 021350 231 IYKSAMAMVGVD---ACDSIAVGDSLHHDIKGANAAGIQ-----SVFIIGGI 274 (313)
Q Consensus 231 ~~~~~~~~lgv~---~~~~v~IGDs~~~Di~~a~~aG~~-----~i~V~~G~ 274 (313)
+...++++++.. ++-++++||+. +|-.+-+.+.-. ++.|.++.
T Consensus 169 av~~ll~~~~~~~~~~~~~l~~GDD~-tDE~~f~~~~~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 169 AVRRLLEELPFAGPKPDFVLYIGDDR-TDEDAFRALRELEEGGFGIKVGSVS 219 (235)
T ss_dssp HHHHHHTTS---------EEEEESSH-HHHHHHHTTTTS----EEEEES---
T ss_pred HHHHHHHhcCccccccceeEEecCCC-CCHHHHHHHHhcccCCCCeEEEeec
Confidence 777888877765 88999999995 999999987643 56666653
No 166
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=96.24 E-value=0.14 Score=52.98 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=45.0
Q ss_pred ccEEEEeccceeecCC---------ccCccHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 30 FKAWLLDQFGVLHDGK---------KPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~---------~~~~~a~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
-.+++||.||||..-. .+.|+..+.|..|.+ .+..++++| ||..+++.+.+...++....
T Consensus 507 ~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS--GR~~~~L~~~~~~~~l~l~a 576 (797)
T PLN03063 507 NRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLS--RSGKDILDKNFGEYNIWLAA 576 (797)
T ss_pred CeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEe--CCCHHHHHHHhCCCCCcEEE
Confidence 4789999999998632 134567788888886 467889999 88888888888765554333
No 167
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=95.99 E-value=0.044 Score=45.42 Aligned_cols=34 Identities=32% Similarity=0.408 Sum_probs=28.0
Q ss_pred CcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 244 CDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 244 ~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
.--++-||| .+||.+|+.+|.+.|.+++-..+..
T Consensus 185 ~~~IhYGDS-D~Di~AAkeaG~RgIRilRAaNSTy 218 (237)
T COG3700 185 NIRIHYGDS-DNDITAAKEAGARGIRILRAANSTY 218 (237)
T ss_pred CceEEecCC-chhhhHHHhcCccceeEEecCCccC
Confidence 445789999 6999999999999999988544443
No 168
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=95.98 E-value=0.017 Score=50.10 Aligned_cols=66 Identities=33% Similarity=0.433 Sum_probs=53.4
Q ss_pred CccEEEEeccceeecC---------------------------CccCccHHHHHHHHHHCCCcEEEEeCCCCCc--hHHH
Q 021350 29 RFKAWLLDQFGVLHDG---------------------------KKPYPGAISTLEMLATTGAKMVVISNSSRRA--STTI 79 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~---------------------------~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~--~~~~ 79 (313)
+-++|+.|+|=|+++. .+++|||.++++...++|..++++||..+.. ....
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~ 157 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTI 157 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhH
Confidence 4569999999998772 2378999999999999999999999876554 3568
Q ss_pred HHHHhCCCCCccccc
Q 021350 80 DKLKSLGFDPSLFAG 94 (313)
Q Consensus 80 ~~l~~~G~~~~~~~~ 94 (313)
+.|.+.|++....+.
T Consensus 158 ~nLk~~g~~~~~~~~ 172 (274)
T COG2503 158 ENLKSEGLPQVLESH 172 (274)
T ss_pred HHHHHcCcccccccc
Confidence 889999998655333
No 169
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.96 E-value=0.081 Score=55.75 Aligned_cols=44 Identities=18% Similarity=0.307 Sum_probs=37.0
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
.+++-+++.++|++|++.|+++.++| +...+......+++|+..
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miT--GD~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMIT--GDNKETAEAICRRIGIFS 578 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEec--CCCHHHHHHHHHHcCCCC
Confidence 56778899999999999999999999 656667777778888863
No 170
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=95.83 E-value=0.082 Score=47.02 Aligned_cols=47 Identities=13% Similarity=0.095 Sum_probs=37.2
Q ss_pred HHHHHHHHHhCCCCCcEEEEcCCchhhHHHH----HHcCCcEEEEcCCCCCC
Q 021350 230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGA----NAAGIQSVFIIGGIHAT 277 (313)
Q Consensus 230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a----~~aG~~~i~V~~G~~~~ 277 (313)
.++..++.+.|..|+.+++|.|+. ..++.. +..|+..+++.+.....
T Consensus 165 ~~L~~fL~~~~~~pk~IIfIDD~~-~nl~sv~~a~k~~~I~f~G~~Yt~~~~ 215 (252)
T PF11019_consen 165 EVLKYFLDKINQSPKKIIFIDDNK-ENLKSVEKACKKSGIDFIGFHYTGAEE 215 (252)
T ss_pred HHHHHHHHHcCCCCCeEEEEeCCH-HHHHHHHHHHhhCCCcEEEEEEcchhh
Confidence 489999999999999999999996 666543 34588888888754433
No 171
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=95.38 E-value=0.031 Score=49.79 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=52.0
Q ss_pred CccEEEEeccceeecCCc----cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350 29 RFKAWLLDQFGVLHDGKK----PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~----~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~ 100 (313)
....|+||+|.||+.+.. .-|...+.+..|++.|.-+++=|.++ .+=+...+++++++... +-|++.+.
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~--~eHV~~sl~~~~L~~~F-d~ii~~G~ 193 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSYGN--REHVRHSLKELKLEGYF-DIIICGGN 193 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecCCC--HHHHHHHHHHhCCcccc-EEEEeCCc
Confidence 567999999999997653 23678899999999998888777444 45566677788888544 77776553
No 172
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.33 E-value=0.046 Score=48.12 Aligned_cols=86 Identities=12% Similarity=0.049 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCce----eecCCC--CHHHHHHHHHHhCC
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV----RWMGKP--DKIIYKSAMAMVGV 241 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~gKP--~~~~~~~~~~~lgv 241 (313)
-.+++..++++.|+++|+++ ++||....... +...+..++... ..++-- ....+..+++++++
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~----------~~~~L~~~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~ 93 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFS----------LHKTLKSLGINADLPEMIISSGEIAVQMILESKKRFDI 93 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHH----------HHHHHHHCCCCccccceEEccHHHHHHHHHhhhhhccC
Confidence 34799999999999999998 88996542111 112233333211 111110 11356666678889
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCC
Q 021350 242 DACDSIAVGDSLHHDIKGANAAGI 265 (313)
Q Consensus 242 ~~~~~v~IGDs~~~Di~~a~~aG~ 265 (313)
+++++++|||+. .|++....+|.
T Consensus 94 ~~~~~~~vGd~~-~d~~~~~~~~~ 116 (242)
T TIGR01459 94 RNGIIYLLGHLE-NDIINLMQCYT 116 (242)
T ss_pred CCceEEEeCCcc-cchhhhcCCCc
Confidence 999999999995 88887765554
No 173
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=95.24 E-value=0.26 Score=51.55 Aligned_cols=60 Identities=15% Similarity=0.143 Sum_probs=45.0
Q ss_pred ccEEEEeccceeecCC---------------ccCccHHHHHHHHHH-CCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 30 FKAWLLDQFGVLHDGK---------------KPYPGAISTLEMLAT-TGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~---------------~~~~~a~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
-.+++||.||||..-. .+.|+..+.|+.|.+ .+..++++| ||..+++.+.+...++....
T Consensus 591 ~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVS--GR~~~~Le~~fg~~~L~LaA 666 (934)
T PLN03064 591 NRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLS--GSDRSVLDENFGEFDMWLAA 666 (934)
T ss_pred ceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEe--CCCHHHHHHHhCCCCceEEe
Confidence 4689999999998621 133567788888886 467899999 88889988888766655434
No 174
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.11 E-value=0.011 Score=48.37 Aligned_cols=52 Identities=27% Similarity=0.336 Sum_probs=33.4
Q ss_pred cEEEEeccceeecCCc--------------------cCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHH
Q 021350 31 KAWLLDQFGVLHDGKK--------------------PYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLK 83 (313)
Q Consensus 31 k~iifDlDGTL~~~~~--------------------~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~~~l~ 83 (313)
|+++||+||||+++.. .-|++.++|+.+.+. ..+++.|.+.+.. +.+.+.+.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh
Confidence 5899999999998442 248899999988544 8888888554322 34444443
No 175
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=94.94 E-value=0.11 Score=53.37 Aligned_cols=88 Identities=18% Similarity=0.110 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
-..++..++++.|++.|+++ ++|++.... .......+|.....--.|. -=..+.+++. ...+++
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~------------a~~ia~~lgi~~~~~~~p~--~K~~~v~~l~-~~~~v~ 632 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRA------------AAAIAGELGIDFRAGLLPE--DKVKAVTELN-QHAPLA 632 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHH------------HHHHHHHcCCCeecCCCHH--HHHHHHHHHh-cCCCEE
Confidence 34689999999999999998 667644311 1122233443321111232 2222444444 346899
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
||||+. ||..++++++ |.|..|..
T Consensus 633 mvGDgi-NDapAl~~A~---vgia~g~~ 656 (741)
T PRK11033 633 MVGDGI-NDAPAMKAAS---IGIAMGSG 656 (741)
T ss_pred EEECCH-HhHHHHHhCC---eeEEecCC
Confidence 999997 9999999999 55555543
No 176
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=94.89 E-value=0.024 Score=47.47 Aligned_cols=29 Identities=28% Similarity=0.342 Sum_probs=23.0
Q ss_pred HHHHH---HHHhCCCCCcEEEEcCCchhhHHHHH
Q 021350 231 IYKSA---MAMVGVDACDSIAVGDSLHHDIKGAN 261 (313)
Q Consensus 231 ~~~~~---~~~lgv~~~~~v~IGDs~~~Di~~a~ 261 (313)
.+..+ ... +.+..++++|||+. +|+.+++
T Consensus 161 ~l~~~~~~~~~-~~~~~~~~~iGDs~-~D~~~lr 192 (192)
T PF12710_consen 161 ALKELYIRDEE-DIDPDRVIAIGDSI-NDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHH-THTCCEEEEEESSG-GGHHHHH
T ss_pred HHHHHHHHhhc-CCCCCeEEEEECCH-HHHHHhC
Confidence 44444 444 88999999999996 9999875
No 177
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.87 E-value=0.91 Score=39.34 Aligned_cols=41 Identities=27% Similarity=0.323 Sum_probs=31.0
Q ss_pred HHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCC-cEEEEcC
Q 021350 230 IIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGI-QSVFIIG 272 (313)
Q Consensus 230 ~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~-~~i~V~~ 272 (313)
.+++..++.-+.+.+ +++||||+ +|++|.+++.- .++.|.-
T Consensus 194 ~i~e~~~ele~~d~s-a~~VGDSI-tDv~ml~~~rgrGglAvaF 235 (315)
T COG4030 194 KIMEGYCELEGIDFS-AVVVGDSI-TDVKMLEAARGRGGLAVAF 235 (315)
T ss_pred HHHHHHHhhcCCCcc-eeEecCcc-cchHHHHHhhccCceEEEe
Confidence 477777776676666 99999997 99999998744 3366655
No 178
>COG4996 Predicted phosphatase [General function prediction only]
Probab=94.77 E-value=0.064 Score=42.19 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=39.8
Q ss_pred cEEEEeccceeecCC-------------------------ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhC
Q 021350 31 KAWLLDQFGVLHDGK-------------------------KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL 85 (313)
Q Consensus 31 k~iifDlDGTL~~~~-------------------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~ 85 (313)
.+|+||+|||||+-. ++++...+++..++..|.-+-.+|=+ ...-..+.|+.+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN--~~~kA~~aLral 78 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWN--FEDKAIKALRAL 78 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecC--chHHHHHHHHHh
Confidence 379999999999822 25667778888888888776655511 123446667777
Q ss_pred CCCCcc
Q 021350 86 GFDPSL 91 (313)
Q Consensus 86 G~~~~~ 91 (313)
++....
T Consensus 79 ~~~~yF 84 (164)
T COG4996 79 DLLQYF 84 (164)
T ss_pred chhhhE
Confidence 776444
No 179
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=94.45 E-value=0.016 Score=55.71 Aligned_cols=44 Identities=18% Similarity=0.315 Sum_probs=34.4
Q ss_pred HHHHHHHhCCCCCcEEEEcCCchhhHHHHHHc-CCcEEEEcCCCC
Q 021350 232 YKSAMAMVGVDACDSIAVGDSLHHDIKGANAA-GIQSVFIIGGIH 275 (313)
Q Consensus 232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~a-G~~~i~V~~G~~ 275 (313)
...+.+.+|..-.++++|||.+..||...+.. ||+|++|-....
T Consensus 284 ~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe 328 (448)
T PF05761_consen 284 WDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELE 328 (448)
T ss_dssp HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHH
T ss_pred HHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhh
Confidence 56777888999999999999999999998876 999999976433
No 180
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=93.69 E-value=0.11 Score=45.24 Aligned_cols=50 Identities=22% Similarity=0.120 Sum_probs=44.2
Q ss_pred ecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 223 WMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 223 ~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
.+||.+ .|+.+.+|+|-+....++|||.. .--.+|++.+++++-|.+...
T Consensus 212 kvGK~~--cFe~I~~Rfg~p~~~f~~IGDG~-eEe~aAk~l~wPFw~I~~h~D 261 (274)
T TIGR01658 212 KVGKLQ--CFKWIKERFGHPKVRFCAIGDGW-EECTAAQAMNWPFVKIDLHPD 261 (274)
T ss_pred hcchHH--HHHHHHHHhCCCCceEEEeCCCh-hHHHHHHhcCCCeEEeecCCC
Confidence 477777 99999999998889999999995 778999999999999988544
No 181
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=93.50 E-value=0.15 Score=42.54 Aligned_cols=21 Identities=14% Similarity=0.273 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHhCCCcE-EEEc
Q 021350 172 QDLEKILEICASKKIPM-VVAN 192 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~-i~tn 192 (313)
+++.+.++.+++.|..+ |+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~ 113 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSG 113 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECC
Confidence 56668888888899888 6665
No 182
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=93.47 E-value=0.13 Score=42.17 Aligned_cols=17 Identities=18% Similarity=0.010 Sum_probs=13.6
Q ss_pred CccEEEEeccceeecCC
Q 021350 29 RFKAWLLDQFGVLHDGK 45 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~ 45 (313)
+-..+++|+|.||+++.
T Consensus 5 ~kl~LVLDLDeTLihs~ 21 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTT 21 (156)
T ss_pred CceEEEEeCCCCccccc
Confidence 45678999999998854
No 183
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=92.85 E-value=0.86 Score=45.41 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=68.6
Q ss_pred CccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH-HHH
Q 021350 29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE-LTH 103 (313)
Q Consensus 29 ~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~-~~~ 103 (313)
....+.++.||++.- ..++.|++.+++++|++.|+++.++|+. ........++++|++ .+.++..... ...
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd--~~~~a~~ia~~lgi~--~~~~~~p~~K~~~v 459 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGD--NRKTAKAVAKELGIN--VRAEVLPDDKAALI 459 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCC--CHHHHHHHHHHcCCc--EEccCChHHHHHHH
Confidence 456788999998754 5678899999999999999999999954 345566667788986 2233322211 122
Q ss_pred HHHHhcCchhhhhcCCeEEEeecCcccchhhccCCcc
Q 021350 104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK 140 (313)
Q Consensus 104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~ 140 (313)
+.+.+. +.++.+++-+.++...++..++-
T Consensus 460 ~~l~~~--------~~~v~~VGDg~nD~~al~~A~vg 488 (562)
T TIGR01511 460 KELQEK--------GRVVAMVGDGINDAPALAQADVG 488 (562)
T ss_pred HHHHHc--------CCEEEEEeCCCccHHHHhhCCEE
Confidence 233221 56788888887777777776653
No 184
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.34 E-value=0.41 Score=45.49 Aligned_cols=47 Identities=26% Similarity=0.390 Sum_probs=42.0
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
|-+-..|..+++.-++++...+++||+...|+.++++.|+.|.+--+
T Consensus 157 KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~~s 203 (635)
T COG5610 157 KNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFYIS 203 (635)
T ss_pred cccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHHHH
Confidence 55556899999999999999999999999999999999998887633
No 185
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=92.31 E-value=0.25 Score=41.80 Aligned_cols=53 Identities=21% Similarity=0.370 Sum_probs=41.7
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
..+++|++.++|++|+++|+++.++||+. ...+...++.+|+.... +.++++.
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~--~~~~~~~l~~~gl~~~f-d~i~~s~ 142 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGS--PAMLKSLVKHAGLDDPF-DAVLSAD 142 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHCCChhhh-heeEehh
Confidence 34678999999999999999999999865 45566777888986544 6666654
No 186
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=92.29 E-value=1 Score=44.81 Aligned_cols=100 Identities=18% Similarity=0.175 Sum_probs=68.8
Q ss_pred CccEEEEeccceeec----CCccCccHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-H
Q 021350 29 RFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-T 102 (313)
Q Consensus 29 ~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g-~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~ 102 (313)
.+..+.+..||++.- ..++.|++.+.+++|++.| +++.++||. +.......++++|++... ..+...... .
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd--~~~~a~~i~~~lgi~~~f-~~~~p~~K~~~ 439 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGD--NRSAAEAVAAELGIDEVH-AELLPEDKLAI 439 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCC--CHHHHHHHHHHhCCCeee-ccCCHHHHHHH
Confidence 457788899997655 5678899999999999999 999999954 455666777888996444 443222111 2
Q ss_pred HHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCc
Q 021350 103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL 139 (313)
Q Consensus 103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~ 139 (313)
.+.+.+ . +.++.+++-+.++...++..|+
T Consensus 440 v~~l~~-~-------~~~v~~vGDg~nD~~al~~A~v 468 (556)
T TIGR01525 440 VKELQE-E-------GGVVAMVGDGINDAPALAAADV 468 (556)
T ss_pred HHHHHH-c-------CCEEEEEECChhHHHHHhhCCE
Confidence 222222 1 4677788877777666766654
No 187
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=91.80 E-value=0.99 Score=43.34 Aligned_cols=38 Identities=5% Similarity=0.001 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG 264 (313)
-|..+-+..++++|++..+.+++|-|++ ..-+--++.+
T Consensus 310 ~~K~eNirkIAkklNlg~dSmvFiDD~p-~ErE~vk~~~ 347 (574)
T COG3882 310 DPKAENIRKIAKKLNLGLDSMVFIDDNP-AERELVKREL 347 (574)
T ss_pred CcchhhHHHHHHHhCCCccceEEecCCH-HHHHHHHhcC
Confidence 4666699999999999999999999997 7777777666
No 188
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=91.77 E-value=3 Score=42.68 Aligned_cols=110 Identities=23% Similarity=0.239 Sum_probs=76.8
Q ss_pred EEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-HHHHH
Q 021350 32 AWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-THQYL 106 (313)
Q Consensus 32 ~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~~~~l 106 (313)
.+++=.||.+.- ++++=|++.+++++|++.|++++++| |-.........+++|++... .++.....+ ..+.+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLT--GDn~~~A~~iA~~lGId~v~-AellPedK~~~V~~l 595 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLT--GDNRRTAEAIAKELGIDEVR-AELLPEDKAEIVREL 595 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHcChHhhe-ccCCcHHHHHHHHHH
Confidence 588999996443 67788999999999999999999999 65556666667888996544 565554443 33445
Q ss_pred HhcCchhhhhcCCeEEEeecCcccchhhccC--------CccccCCCCCCCEEEec
Q 021350 107 LRRDDAWFAALGRSCIHMTWSDRGAISLEGL--------GLKVVENVEEADFILAH 154 (313)
Q Consensus 107 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~--------g~~~~~~~~~~~~~~~~ 154 (313)
+++ |+++..++-+.+....|... |-++.. +..|++++.
T Consensus 596 ~~~--------g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~--eaADvvL~~ 641 (713)
T COG2217 596 QAE--------GRKVAMVGDGINDAPALAAADVGIAMGSGTDVAI--EAADVVLMR 641 (713)
T ss_pred Hhc--------CCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHH--HhCCEEEec
Confidence 433 57888888888877666553 222222 456777764
No 189
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=91.36 E-value=2.1 Score=37.03 Aligned_cols=38 Identities=21% Similarity=0.085 Sum_probs=29.7
Q ss_pred hCCCCCcEEEEcCCchhhHHHHHHc-CCcEEEEcCCCCCC
Q 021350 239 VGVDACDSIAVGDSLHHDIKGANAA-GIQSVFIIGGIHAT 277 (313)
Q Consensus 239 lgv~~~~~v~IGDs~~~Di~~a~~a-G~~~i~V~~G~~~~ 277 (313)
-|+.-++++||||+- +|+=+-... +.+.+..+.|+.-.
T Consensus 178 ~gv~yer~iYvGDG~-nD~CP~l~Lr~~D~ampRkgfpl~ 216 (256)
T KOG3120|consen 178 DGVRYERLIYVGDGA-NDFCPVLRLRACDVAMPRKGFPLW 216 (256)
T ss_pred cCCceeeEEEEcCCC-CCcCcchhcccCceecccCCCchH
Confidence 488889999999996 999776544 56788888887643
No 190
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=90.62 E-value=0.54 Score=47.92 Aligned_cols=89 Identities=15% Similarity=0.141 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecC-CCCHHHHHHHHHHhCCCCCcE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMG-KPDKIIYKSAMAMVGVDACDS 246 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g-KP~~~~~~~~~~~lgv~~~~~ 246 (313)
-..++..+++..|++.|++. +.|.++... ..++-..+|......+ +|. -=....+++.-.-..+
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~------------A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~g~~V 602 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRT------------AEAIAKELGIDEVRAELLPE--DKAEIVRELQAEGRKV 602 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHH------------HHHHHHHcChHhheccCCcH--HHHHHHHHHHhcCCEE
Confidence 34578999999999999998 556543311 1112222343222111 343 3333444443233789
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 247 IAVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
.||||.+ ||--+..+|. -+|.+.+|
T Consensus 603 amVGDGI-NDAPALA~Ad-VGiAmG~G 627 (713)
T COG2217 603 AMVGDGI-NDAPALAAAD-VGIAMGSG 627 (713)
T ss_pred EEEeCCc-hhHHHHhhcC-eeEeecCC
Confidence 9999997 9977777776 34555554
No 191
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=90.57 E-value=0.74 Score=39.24 Aligned_cols=57 Identities=21% Similarity=0.072 Sum_probs=38.8
Q ss_pred CccEEEEeccceeecCC-------cc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 29 RFKAWLLDQFGVLHDGK-------KP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~-------~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.-++++.|+|+||++.. .. =|+..++|+.+.+ ...+++-|-+ ...-+...+..+|+.
T Consensus 20 ~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa--~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 20 GKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWSAT--SMKWIEIKMTELGVL 84 (195)
T ss_pred CCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEecC--CHHHHHHHHHHhccc
Confidence 55899999999999853 11 2788888888777 5777777732 233344455556654
No 192
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=90.32 E-value=0.69 Score=42.09 Aligned_cols=58 Identities=19% Similarity=0.204 Sum_probs=47.4
Q ss_pred EEEEeccceeec-------------------CCccCccHHHHHHHHHHCC-CcEEEEeCCCCCc-hHHHHHHHhCCCCC
Q 021350 32 AWLLDQFGVLHD-------------------GKKPYPGAISTLEMLATTG-AKMVVISNSSRRA-STTIDKLKSLGFDP 89 (313)
Q Consensus 32 ~iifDlDGTL~~-------------------~~~~~~~a~~~l~~l~~~g-~~~~~~Tn~~~~~-~~~~~~l~~~G~~~ 89 (313)
.+|.|+|+|+.. ...++||...+.+.|.+.| .+++++||+.... ..+.+.+...+|+.
T Consensus 163 giISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~ 241 (373)
T COG4850 163 GIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPY 241 (373)
T ss_pred eeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCC
Confidence 589999999865 2357899999999999888 8999999988655 56677777777874
No 193
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=90.32 E-value=7.3 Score=40.43 Aligned_cols=88 Identities=15% Similarity=0.107 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCcee-ecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVR-WMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
..++...+...|++.|+.. ..|.++.. +-.+.-...|.+.. ---+|+ -=....+.+.-.-..+.
T Consensus 724 vr~~a~~av~~Lk~~Gi~v~mLTGDn~~------------aA~svA~~VGi~~V~aev~P~--~K~~~Ik~lq~~~~~Va 789 (951)
T KOG0207|consen 724 VRPDAALAVAELKSMGIKVVMLTGDNDA------------AARSVAQQVGIDNVYAEVLPE--QKAEKIKEIQKNGGPVA 789 (951)
T ss_pred cchhHHHHHHHHHhcCceEEEEcCCCHH------------HHHHHHHhhCcceEEeccCch--hhHHHHHHHHhcCCcEE
Confidence 3478888999999999988 56664441 11222233442221 122554 22333444443447899
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
||||.+ ||--+..+|. -+|.+..|
T Consensus 790 MVGDGI-NDaPALA~Ad-VGIaig~g 813 (951)
T KOG0207|consen 790 MVGDGI-NDAPALAQAD-VGIAIGAG 813 (951)
T ss_pred EEeCCC-CccHHHHhhc-cceeeccc
Confidence 999997 9965555555 44555555
No 194
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=90.23 E-value=0.51 Score=41.67 Aligned_cols=50 Identities=16% Similarity=0.252 Sum_probs=38.6
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
++||+.+.|+.|+++|+++.++||+. ...+...++.+|+.... +.++++.
T Consensus 109 l~pgv~e~L~~L~~~g~~l~I~Tn~~--~~~~~~~l~~~gl~~~F-d~iv~~~ 158 (248)
T PLN02770 109 PLNGLYKLKKWIEDRGLKRAAVTNAP--RENAELMISLLGLSDFF-QAVIIGS 158 (248)
T ss_pred cCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHcCChhhC-cEEEecC
Confidence 46788899999999999999999765 45566678888987554 6666554
No 195
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=90.20 E-value=0.54 Score=39.83 Aligned_cols=52 Identities=19% Similarity=0.249 Sum_probs=36.2
Q ss_pred cEEEEeccceeecCCc-cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 31 KAWLLDQFGVLHDGKK-PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 31 k~iifDlDGTL~~~~~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
-.++||+||||.-... ..|...++++.|+.. ..+.++- -.++.+..+++|.+
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-v~ig~Vg-----gsDl~k~~eqlG~~ 64 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-VTIGFVG-----GSDLSKQQEQLGDN 64 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHHHhhh-eEEEEee-----cHHHHHHHHHhchh
Confidence 4799999999998764 457888888887754 3333333 34566666777765
No 196
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=90.16 E-value=0.42 Score=41.04 Aligned_cols=50 Identities=30% Similarity=0.471 Sum_probs=38.6
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
+++|++.++|+.|++.|+++.++||+. .......++.+|+.... +.++++
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~--~~~~~~~l~~~~l~~~f-~~i~~~ 143 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGL--PVKQWEKLERLGVRDFF-DAVITS 143 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHhCChHHhc-cEEEEe
Confidence 467899999999999999999999875 33455668888887544 556554
No 197
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=90.02 E-value=0.39 Score=38.95 Aligned_cols=54 Identities=33% Similarity=0.514 Sum_probs=42.4
Q ss_pred cCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 43 DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 43 ~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
...+++|++.++|+.|++.|+++.++||+. .+.+...++.+|+.... +.++++.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~--~~~~~~~l~~~~~~~~f-~~i~~~~ 127 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGS--RERIERVLERLGLDDYF-DEIISSD 127 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSE--HHHHHHHHHHTTHGGGC-SEEEEGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCC--ccccccccccccccccc-ccccccc
Confidence 344678999999999999999999999874 56677888889987444 6666553
No 198
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=89.92 E-value=4 Score=42.28 Aligned_cols=48 Identities=17% Similarity=0.270 Sum_probs=38.7
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
|.+.-.+++-|++.+++++|++.|+++.++| |-.........+++|+.
T Consensus 435 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miT--GD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 435 GLLPLFDPPRHDTKETIERARHLGVEVKMVT--GDHLAIAKETARRLGLG 482 (755)
T ss_pred EEeeccCCChhhHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCC
Confidence 3333366777999999999999999999999 66666677777888986
No 199
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=89.84 E-value=3.2 Score=43.89 Aligned_cols=43 Identities=14% Similarity=0.275 Sum_probs=35.8
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.+++=|++.+++++|++.|++++++| |-.........+++|+.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miT--GD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILT--GDSELVAAKVCHEVGLD 590 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCC
Confidence 45667899999999999999999999 65566667777888885
No 200
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=89.80 E-value=3.8 Score=43.79 Aligned_cols=44 Identities=14% Similarity=0.201 Sum_probs=38.6
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
.+++-+++.++++++++.|++++++| |+.........+++|+-.
T Consensus 566 ~Dplr~~v~~aI~~l~~~Gi~v~~~T--Gd~~~ta~~ia~~~gi~~ 609 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSAGIKVIMVT--GDHPITAKAIAKGVGIIS 609 (997)
T ss_pred cCCChHHHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCCC
Confidence 45666899999999999999999999 888888888889999953
No 201
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=89.47 E-value=4.7 Score=42.85 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=39.4
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
|.+.-.+++-|++.+++++|++.|++++++| |-.........+++|+..
T Consensus 572 Gli~~~Dplr~~~~~aI~~l~~aGI~v~miT--GD~~~tA~~iA~~~GI~~ 620 (941)
T TIGR01517 572 GVVGIKDPLRPGVREAVQECQRAGITVRMVT--GDNIDTAKAIARNCGILT 620 (941)
T ss_pred EEeeccCCCchhHHHHHHHHHHCCCEEEEEC--CCChHHHHHHHHHcCCCC
Confidence 4444466777899999999999999999999 666667777777888864
No 202
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=89.44 E-value=0.52 Score=39.93 Aligned_cols=49 Identities=33% Similarity=0.344 Sum_probs=37.7
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
+++|++.++|+.|++.|+++.++||+.. .+...++.+|+.... +.++.+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~---~~~~~l~~~~l~~~f-d~i~~s 153 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS---RLRGLLEALGLLEYF-DFVVTS 153 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch---hHHHHHHHCCcHHhc-ceEEee
Confidence 5689999999999999999999998653 245567888886544 555544
No 203
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=89.39 E-value=0.52 Score=40.97 Aligned_cols=50 Identities=20% Similarity=0.331 Sum_probs=37.8
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
++||+.+.|..|+++|+++.++||+. .+.+...++.+|+.... +.++++.
T Consensus 94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~~--~~~~~~~l~~~~l~~~f-d~iv~s~ 143 (224)
T PRK14988 94 LREDTVPFLEALKASGKRRILLTNAH--PHNLAVKLEHTGLDAHL-DLLLSTH 143 (224)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCcC--HHHHHHHHHHCCcHHHC-CEEEEee
Confidence 46899999999999999999999865 44455567778886544 6665543
No 204
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=89.09 E-value=1.2 Score=37.70 Aligned_cols=55 Identities=24% Similarity=0.244 Sum_probs=41.4
Q ss_pred EEEeccceee----cCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 33 WLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 33 iifDlDGTL~----~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
+.+-.+++++ ...++.|++.++|+.|++.|+++.++| +-.........+.+|+..
T Consensus 110 ~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~T--GD~~~~a~~~~~~lgi~~ 168 (215)
T PF00702_consen 110 IVLAVNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILT--GDNESTASAIAKQLGIFD 168 (215)
T ss_dssp EEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEE--SSEHHHHHHHHHHTTSCS
T ss_pred cceeecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeee--cccccccccccccccccc
Confidence 4444355443 355778999999999999999999999 545667777778899953
No 205
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=89.08 E-value=1.7 Score=43.09 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=65.2
Q ss_pred cEEEEeccceeec----CCccCccHHHHHHHHHHCCC-cEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH-HHHH
Q 021350 31 KAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGA-KMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE-LTHQ 104 (313)
Q Consensus 31 k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~-~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~-~~~~ 104 (313)
..+.+-.||++.- ..++.|++.++|+.|++.|+ ++.++|| .+.......++++|++... ..+..... ...+
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTg--d~~~~a~~i~~~lgi~~~f-~~~~p~~K~~~i~ 419 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTG--DRRAVAERVARELGIDEVH-AELLPEDKLEIVK 419 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcC--CCHHHHHHHHHHcCChhhh-hccCcHHHHHHHH
Confidence 4456666776543 56788999999999999999 9999994 4456667777888997543 43333221 1222
Q ss_pred HHHhcCchhhhhcCCeEEEeecCcccchhhccCCc
Q 021350 105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL 139 (313)
Q Consensus 105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~ 139 (313)
.+... +..+.+++-+.++...++..++
T Consensus 420 ~l~~~--------~~~v~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 420 ELREK--------YGPVAMVGDGINDAPALAAADV 446 (536)
T ss_pred HHHhc--------CCEEEEEeCCHHHHHHHHhCCE
Confidence 33222 4567777777776667776664
No 206
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=88.96 E-value=4.1 Score=42.88 Aligned_cols=48 Identities=19% Similarity=0.250 Sum_probs=37.8
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
|.+.-.+++=|++.+++++|++.|++++++| |-.........+++|+.
T Consensus 508 Gli~l~Dp~R~~~~~aI~~l~~aGI~vvmiT--GD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 508 GFLGFLDPPKESTKEAIAALFKNGINVKVLT--GDNEIVTARICQEVGID 555 (867)
T ss_pred EEEEeeCCCchhHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCC
Confidence 3333366777899999999999999999999 65566666667788885
No 207
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=88.77 E-value=1.5 Score=34.83 Aligned_cols=56 Identities=20% Similarity=0.218 Sum_probs=39.4
Q ss_pred EEEEeccceeec--CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 32 AWLLDQFGVLHD--GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 32 ~iifDlDGTL~~--~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.-++|+||.|++ +.+-+ ...+.++.+.+.|.|++++|.-..+++.+.+..+.++-.
T Consensus 45 iAildL~G~~l~l~S~R~~-~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~A~ 102 (138)
T PF04312_consen 45 IAILDLDGELLDLKSSRNM-SRSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFNAV 102 (138)
T ss_pred EEEEecCCcEEEEEeecCC-CHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhCCc
Confidence 468999999887 33222 456788888999999999997555555555555555544
No 208
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=88.46 E-value=0.57 Score=38.62 Aligned_cols=50 Identities=32% Similarity=0.456 Sum_probs=36.2
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
.+++|++.+++++|++.|+++.++||+.... ...+.++|+.... +.++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~---~~~~~~~~l~~~f-~~i~~~ 133 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH---AVLVQELGLRDLF-DVVIFS 133 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHhcCCHHHC-CEEEEc
Confidence 3567999999999999999999999877443 2333447876544 555543
No 209
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=88.26 E-value=2.6 Score=34.27 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=50.6
Q ss_pred CccEEEEeccceeec--CCccCccHHHHHHHHHH-CC-CcEEEEeCCCC--Cc---hHHHHHHH-hCCCCCcccccccch
Q 021350 29 RFKAWLLDQFGVLHD--GKKPYPGAISTLEMLAT-TG-AKMVVISNSSR--RA---STTIDKLK-SLGFDPSLFAGAITS 98 (313)
Q Consensus 29 ~~k~iifDlDGTL~~--~~~~~~~a~~~l~~l~~-~g-~~~~~~Tn~~~--~~---~~~~~~l~-~~G~~~~~~~~ii~~ 98 (313)
.+|+++||-|.|+.- +..++|.-...++.++. -| +.+.+++|+.. .. .+.++.|+ +.|+++-. +...-|
T Consensus 42 ~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVlR-Hs~kKP 120 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVLR-HSVKKP 120 (190)
T ss_pred CceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCceEe-ecccCC
Confidence 599999999999876 55678888888888886 44 78888899542 22 35677776 69998766 444433
No 210
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=88.16 E-value=0.59 Score=39.91 Aligned_cols=53 Identities=17% Similarity=0.218 Sum_probs=34.9
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
.+++|++.++|+.|+++|+++.++||+..........+...++.... +.++.+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d~v~~s 145 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-DAVVES 145 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-CEEEEe
Confidence 35689999999999999999999999764432222233334543333 444443
No 211
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=88.13 E-value=0.81 Score=40.85 Aligned_cols=50 Identities=12% Similarity=0.192 Sum_probs=38.3
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
++|++.+.|+.|++.|+++.++||+. ...+...++.+|+.... +.++++.
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~~--~~~~~~~l~~~gl~~~F-d~ii~~~ 159 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRP--RRYLERAIEAVGMEGFF-SVVLAAE 159 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCcC--HHHHHHHHHHcCCHhhC-cEEEecc
Confidence 57889999999999999999999865 34555667778887554 6666553
No 212
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=88.10 E-value=1 Score=44.66 Aligned_cols=72 Identities=11% Similarity=0.067 Sum_probs=48.1
Q ss_pred CccEEEEeccceeecCCc-----------c-CccHHHHHHHHHHCCCcEEEEeCCC----CCchHHHHHHHhCCCCCccc
Q 021350 29 RFKAWLLDQFGVLHDGKK-----------P-YPGAISTLEMLATTGAKMVVISNSS----RRASTTIDKLKSLGFDPSLF 92 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~-----------~-~~~a~~~l~~l~~~g~~~~~~Tn~~----~~~~~~~~~l~~~G~~~~~~ 92 (313)
.-+.|+.|+|||+..+.- + ..|+++..-+..++|++++++|-.. -.++.+...+++-|-..+.=
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdG 608 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDG 608 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCC
Confidence 347899999999998542 1 2467778888899999999999422 12346667777777654431
Q ss_pred ccccchHH
Q 021350 93 AGAITSGE 100 (313)
Q Consensus 93 ~~ii~~~~ 100 (313)
--+++|..
T Consensus 609 PViLSPd~ 616 (738)
T KOG2116|consen 609 PVILSPDS 616 (738)
T ss_pred CEEeCCCc
Confidence 23444433
No 213
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=88.04 E-value=5.7 Score=41.99 Aligned_cols=43 Identities=16% Similarity=0.287 Sum_probs=35.6
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.+++=|++.+++++|++.|++++++| |-.........+++|+.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miT--GD~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 548 LDPPKESAAPAIAALRENGVAVKVLT--GDNPIVTAKICREVGLE 590 (903)
T ss_pred cCccHHHHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCC
Confidence 56677899999999999999999999 65566666667778885
No 214
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=87.99 E-value=0.82 Score=37.91 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=37.9
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
.+++|++.++|+.|++.|+++.++||+ ..+...++.+|+.... +.++.+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~----~~~~~~l~~~~l~~~f-~~v~~~ 135 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS----KNADRILAKLGLTDYF-DAIVDA 135 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc----hhHHHHHHHcChHHHC-CEeeeh
Confidence 467899999999999999999999976 3456667888886544 555544
No 215
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=87.66 E-value=1 Score=38.75 Aligned_cols=50 Identities=16% Similarity=0.184 Sum_probs=36.5
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
+++|++.++|..|+++|+++.++||+. ...+...++.+|+.... +.++++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~--~~~~~~~l~~~~l~~~f-~~~~~~ 141 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASP--LHMLEAVLTMFDLRDYF-DALASA 141 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCc--HHHHHHHHHhCcchhcc-cEEEEc
Confidence 356789999999999999999999755 34455566778886554 544443
No 216
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=87.66 E-value=4 Score=41.52 Aligned_cols=90 Identities=11% Similarity=0.055 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
...++.+++++.|++.|++. ++|.+... .....-..+|...... .-.|+-=....+.+.=.-..+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~------------ta~~iA~~lGI~~v~a-~~~PedK~~~v~~lq~~g~~Va 512 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRL------------TAAAIAAEAGVDDFIA-EATPEDKIALIRQEQAEGKLVA 512 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHH------------HHHHHHHHcCCCEEEc-CCCHHHHHHHHHHHHHcCCeEE
Confidence 34589999999999999988 56654331 1112222344433222 2333333333333322335799
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
|+||+. ||..+.+++++ ++.+.+|
T Consensus 513 mvGDG~-NDapAL~~Adv-GiAm~~g 536 (675)
T TIGR01497 513 MTGDGT-NDAPALAQADV-GVAMNSG 536 (675)
T ss_pred EECCCc-chHHHHHhCCE-eEEeCCC
Confidence 999997 99999999994 4555554
No 217
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=87.50 E-value=1 Score=38.48 Aligned_cols=48 Identities=27% Similarity=0.311 Sum_probs=37.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT 97 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~ 97 (313)
++|++.++|+.|+++|+++.++||+. ...+...++.+|+.... +.+++
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~--~~~~~~~l~~~gl~~~f-~~i~~ 130 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKM--RDTVEMGLKLTGLDEFF-DVVIT 130 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHcCChhce-eEEEe
Confidence 56889999999999999999999765 45667778888987554 55554
No 218
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=87.23 E-value=0.64 Score=43.31 Aligned_cols=81 Identities=25% Similarity=0.286 Sum_probs=53.6
Q ss_pred CccEEEEeccceeecCC-------------ccCccHHHHHHHHHHCCCcEEEEeCCCCC---c---hHHH----HHHHhC
Q 021350 29 RFKAWLLDQFGVLHDGK-------------KPYPGAISTLEMLATTGAKMVVISNSSRR---A---STTI----DKLKSL 85 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~-------------~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~---~---~~~~----~~l~~~ 85 (313)
..|.+.||+||||++.. .+++....-+..|.+.|+..++.||+... . ++.. .....+
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl 153 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL 153 (422)
T ss_pred CcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc
Confidence 46789999999999832 24567778899999999999999995522 1 1222 333568
Q ss_pred CCCCcccccccc-----hHHHHHHHHHhc
Q 021350 86 GFDPSLFAGAIT-----SGELTHQYLLRR 109 (313)
Q Consensus 86 G~~~~~~~~ii~-----~~~~~~~~l~~~ 109 (313)
|+++.....++. |...+.+++.+.
T Consensus 154 ~vPi~~~~A~~~~~yRKP~tGMwe~~~~~ 182 (422)
T KOG2134|consen 154 GVPIQLLAAIIKGKYRKPSTGMWEFLKRL 182 (422)
T ss_pred CCceEEeeeccCCcccCcchhHHHHHHHH
Confidence 888544333222 455566776643
No 219
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=86.95 E-value=6.3 Score=42.41 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=36.7
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.+++-+++.++|+.+++.|++++++| |..........+++|+.
T Consensus 644 ~Dp~r~~v~~aI~~l~~aGIkv~MiT--GD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQAGINVHMLT--GDFPETAKAIAQEVGII 686 (1053)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHcCCC
Confidence 45667899999999999999999999 76677777778888985
No 220
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=86.76 E-value=9.4 Score=40.48 Aligned_cols=45 Identities=22% Similarity=0.327 Sum_probs=35.9
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCc
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS 90 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~ 90 (313)
.+++=+++.++|+.+++.|+++.++| |-.........+++|+...
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiT--GD~~~TA~aIa~~~Gi~~~ 589 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMIT--GDHVETAIAIAKECGIEAE 589 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEC--CCCHHHHHHHHHHcCCCCC
Confidence 35566899999999999999999999 6556666666777787543
No 221
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=86.50 E-value=1.2 Score=38.09 Aligned_cols=51 Identities=20% Similarity=0.360 Sum_probs=38.5
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC--CcccccccchH
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD--PSLFAGAITSG 99 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~--~~~~~~ii~~~ 99 (313)
+++||+.++|++|+++|+++.++||+. .+.....++.+|+. ... +.++++.
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~--~~~~~~~l~~~~l~~~~~f-~~i~~~~ 139 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFD--RDTAERLLEKLGWTVGDDV-DAVVCPS 139 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCc--hHHHHHHHHHhhhhhhccC-CEEEcCC
Confidence 578999999999999999999999765 45555667777876 333 5565553
No 222
>PLN02645 phosphoglycolate phosphatase
Probab=86.35 E-value=3.2 Score=38.00 Aligned_cols=88 Identities=15% Similarity=0.145 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc--e-eecCCCCHHHHHHHHHHhCCCCCc
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE--V-RWMGKPDKIIYKSAMAMVGVDACD 245 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~~~gKP~~~~~~~~~~~lgv~~~~ 245 (313)
.+++..++++.++++|.++ ++||...... ..+...+..+|.. . ..++ + .......++..++...+
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~---------~~~~~~l~~lGi~~~~~~I~t-s-~~~~~~~l~~~~~~~~~ 113 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSR---------AQYGKKFESLGLNVTEEEIFS-S-SFAAAAYLKSINFPKDK 113 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCH---------HHHHHHHHHCCCCCChhhEee-h-HHHHHHHHHhhccCCCC
Confidence 4588899999999999998 7898554221 1122223333321 1 1111 1 12444555555665556
Q ss_pred EEEEcCCchhhHHHHHHcCCcEEE
Q 021350 246 SIAVGDSLHHDIKGANAAGIQSVF 269 (313)
Q Consensus 246 ~v~IGDs~~~Di~~a~~aG~~~i~ 269 (313)
.++++++ ..+.+.++.+|+.++.
T Consensus 114 ~V~viG~-~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 114 KVYVIGE-EGILEELELAGFQYLG 136 (311)
T ss_pred EEEEEcC-HHHHHHHHHCCCEEec
Confidence 6888888 4899999999998754
No 223
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=86.34 E-value=4.8 Score=35.02 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCCccccccchh-ccCCchHHHHHHH-hcCceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350 169 MSLQDLEKILEICASKKIPMVVANPDYVTVEARAL-RVMPGTLASKFEK-LGGEVRWMGKPDKIIYKSAMAMVGVDACDS 246 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~-~~~~g~~~~~~~~-~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~ 246 (313)
..|+++..+++.-+..|+++++.+.+.+......+ .-..|.+...+.. +.. ..=-|-.-..|..+.+.+|.++.++
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt--~iG~K~e~~sy~~I~~~Ig~s~~ei 200 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT--TIGLKVESQSYKKIGHLIGKSPREI 200 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc--cccceehhHHHHHHHHHhCCChhhe
Confidence 45788888888778889988665555433222110 1122333332221 111 1112667779999999999999999
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 247 IAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
+..-|.. .-..+|+.+|+.+.++..
T Consensus 201 LfLTd~~-~Ea~aa~~aGl~a~l~~r 225 (254)
T KOG2630|consen 201 LFLTDVP-REAAAARKAGLQAGLVSR 225 (254)
T ss_pred EEeccCh-HHHHHHHhcccceeeeec
Confidence 9999996 999999999998888876
No 224
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=85.63 E-value=8.7 Score=39.19 Aligned_cols=96 Identities=19% Similarity=0.098 Sum_probs=65.2
Q ss_pred ccEEEEecccee----ecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHH--H
Q 021350 30 FKAWLLDQFGVL----HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELT--H 103 (313)
Q Consensus 30 ~k~iifDlDGTL----~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~--~ 103 (313)
.+.+.+-.|+++ .-.+.+=|++.+++++|++.|++++++| |-.........+++|++... .+. +|.+.. .
T Consensus 425 ~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiT--GDn~~TA~aIA~elGId~v~-A~~-~PedK~~iV 500 (679)
T PRK01122 425 GTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMIT--GDNPLTAAAIAAEAGVDDFL-AEA-TPEDKLALI 500 (679)
T ss_pred CcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCcEEE-ccC-CHHHHHHHH
Confidence 455666555554 3466777999999999999999999999 66667777778889996322 222 333321 1
Q ss_pred HHHHhcCchhhhhcCCeEEEeecCcccchhhccC
Q 021350 104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGL 137 (313)
Q Consensus 104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~ 137 (313)
+.+.+ . |+.|.+.+-+.+....|.+.
T Consensus 501 ~~lQ~-~-------G~~VaMtGDGvNDAPALa~A 526 (679)
T PRK01122 501 RQEQA-E-------GRLVAMTGDGTNDAPALAQA 526 (679)
T ss_pred HHHHH-c-------CCeEEEECCCcchHHHHHhC
Confidence 22222 2 66777888888887777765
No 225
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=85.48 E-value=1.4 Score=37.29 Aligned_cols=51 Identities=24% Similarity=0.356 Sum_probs=38.7
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
.+++|++.+.|++|+++|+++.++||+. ...+...++.+|+.... +.++++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~--~~~~~~~l~~~~l~~~f-~~i~~~ 124 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKS--GPRARSLLEALGLLPLF-DHVIGS 124 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHHHcCChhhe-eeEEec
Confidence 4678999999999999999999999765 34455667888886443 555443
No 226
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=85.28 E-value=8.2 Score=39.33 Aligned_cols=96 Identities=13% Similarity=0.022 Sum_probs=64.3
Q ss_pred ccEEEEecccee----ecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH--HH
Q 021350 30 FKAWLLDQFGVL----HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL--TH 103 (313)
Q Consensus 30 ~k~iifDlDGTL----~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~--~~ 103 (313)
.+.+..-.|+++ .-.+++=|++.+++++|++.|++++++| |-.........+++|++... .+. +|.+. ..
T Consensus 421 ~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiT--GDn~~TA~aIA~elGI~~v~-A~~-~PedK~~iV 496 (673)
T PRK14010 421 GTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCT--GDNELTAATIAKEAGVDRFV-AEC-KPEDKINVI 496 (673)
T ss_pred CeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCceEE-cCC-CHHHHHHHH
Confidence 444443335553 3356777899999999999999999999 76677777778889996322 333 33332 22
Q ss_pred HHHHhcCchhhhhcCCeEEEeecCcccchhhccC
Q 021350 104 QYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGL 137 (313)
Q Consensus 104 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~ 137 (313)
+.+.+ . |+.|-+.+-+.+....|.+.
T Consensus 497 ~~lQ~-~-------G~~VaMtGDGvNDAPALa~A 522 (673)
T PRK14010 497 REEQA-K-------GHIVAMTGDGTNDAPALAEA 522 (673)
T ss_pred HHHHh-C-------CCEEEEECCChhhHHHHHhC
Confidence 22322 2 67777888888877777775
No 227
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=84.84 E-value=1.8 Score=36.82 Aligned_cols=50 Identities=22% Similarity=0.355 Sum_probs=38.2
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT 97 (313)
Q Consensus 45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~ 97 (313)
.+++|++.++|+.|+++|+++.++||+. ...+...++.+|+.... +.+++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~--~~~~~~~l~~~~l~~~f-~~~~~ 133 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKP--TPLARPLLELLGLAKYF-SVLIG 133 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHcCcHhhC-cEEEe
Confidence 3578999999999999999999999764 45566677888886443 44443
No 228
>PRK11587 putative phosphatase; Provisional
Probab=84.58 E-value=1.9 Score=37.08 Aligned_cols=48 Identities=23% Similarity=0.340 Sum_probs=34.4
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
++||+.++|+.|+++|+++.++||+.+. .....++..|+.. . +.+++.
T Consensus 84 ~~pg~~e~L~~L~~~g~~~~ivTn~~~~--~~~~~l~~~~l~~-~-~~i~~~ 131 (218)
T PRK11587 84 ALPGAIALLNHLNKLGIPWAIVTSGSVP--VASARHKAAGLPA-P-EVFVTA 131 (218)
T ss_pred eCcCHHHHHHHHHHcCCcEEEEcCCCch--HHHHHHHhcCCCC-c-cEEEEH
Confidence 4688899999999999999999987643 3345566777742 2 444443
No 229
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=84.52 E-value=3.8 Score=37.84 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCc-hHHHHHHHh---cCceee-----------------------
Q 021350 172 QDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPG-TLASKFEKL---GGEVRW----------------------- 223 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g-~~~~~~~~~---~~~~~~----------------------- 223 (313)
+.+...++.|+++|.++ ++||....+-...- ....| ....+|+.. ..++.+
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM-~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv 321 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGM-RFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKV 321 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCc-eeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhh
Confidence 46777888889999988 89997654432221 12222 222333321 011100
Q ss_pred --cCCCC---HHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHH-HcCCcEEEEcC
Q 021350 224 --MGKPD---KIIYKSAMAMVGVDACDSIAVGDSLHHDIKGAN-AAGIQSVFIIG 272 (313)
Q Consensus 224 --~gKP~---~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~-~aG~~~i~V~~ 272 (313)
+-|.. ...+...++.-|.--.+++++||.+.+|+.... ..||++-.|-.
T Consensus 322 ~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 322 DKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 11111 002334455557788999999999999998887 89998877654
No 230
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=84.49 E-value=1.9 Score=35.65 Aligned_cols=49 Identities=20% Similarity=0.285 Sum_probs=37.2
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
+++|++.++|+.|+++|+++.++||+.. ....++.+|+.... +.++++.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~----~~~~l~~~~l~~~f-~~~~~~~ 135 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN----APTVLEKLGLIDYF-DAIVDPA 135 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc----HHHHHHhcCcHhhC-cEEEehh
Confidence 5789999999999999999999997532 23467888887554 6655543
No 231
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=84.34 E-value=2.2 Score=36.89 Aligned_cols=49 Identities=22% Similarity=0.348 Sum_probs=39.3
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT 97 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~ 97 (313)
.++|++.+.|..|++.|++..++||.+ ...+...++.+|+.... +.++.
T Consensus 89 ~~~~gv~e~L~~L~~~g~~l~i~T~k~--~~~~~~~l~~~gl~~~F-~~i~g 137 (220)
T COG0546 89 RLFPGVKELLAALKSAGYKLGIVTNKP--ERELDILLKALGLADYF-DVIVG 137 (220)
T ss_pred ccCCCHHHHHHHHHhCCCeEEEEeCCc--HHHHHHHHHHhCCcccc-ceEEc
Confidence 468999999999999999999999654 56666777888998666 55554
No 232
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=84.08 E-value=1.7 Score=38.33 Aligned_cols=51 Identities=16% Similarity=0.156 Sum_probs=36.7
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
+++||+.+.|+.|+++|+++.++||+. ...+...++.+|+....++.++++
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~--~~~~~~~l~~~gl~~~f~d~ii~~ 149 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYT--REMMDVVAPEAALQGYRPDYNVTT 149 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCc--HHHHHHHHHHHHhcCCCCceEEcc
Confidence 568999999999999999999999764 445555666667654322444443
No 233
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=83.16 E-value=15 Score=39.74 Aligned_cols=49 Identities=14% Similarity=0.207 Sum_probs=40.8
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
|-+.=.+++-|++.++|+.|++.|++++++| |..........+++|+-.
T Consensus 649 Gli~~~d~lr~~~~~~I~~l~~agi~v~miT--GD~~~TA~~iA~~~gii~ 697 (1054)
T TIGR01657 649 GFIVFENPLKPDTKEVIKELKRASIRTVMIT--GDNPLTAVHVARECGIVN 697 (1054)
T ss_pred EEEEEecCCCccHHHHHHHHHHCCCeEEEEC--CCCHHHHHHHHHHcCCCC
Confidence 5555566778999999999999999999999 777777777788889953
No 234
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=82.75 E-value=6 Score=40.29 Aligned_cols=100 Identities=14% Similarity=0.038 Sum_probs=68.3
Q ss_pred CccEEEEecccee----ecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH--H
Q 021350 29 RFKAWLLDQFGVL----HDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL--T 102 (313)
Q Consensus 29 ~~k~iifDlDGTL----~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~--~ 102 (313)
....+.+-.|+++ .-.+++=|++.+++++|++.|++++++| +..........+++|++... .+. +|.+. .
T Consensus 425 G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miT--GD~~~ta~~iA~~lGI~~v~-a~~-~PedK~~~ 500 (675)
T TIGR01497 425 GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMIT--GDNRLTAAAIAAEAGVDDFI-AEA-TPEDKIAL 500 (675)
T ss_pred CCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCCEEE-cCC-CHHHHHHH
Confidence 3456666556554 3366777999999999999999999999 76677777888899996322 332 23322 2
Q ss_pred HHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCcc
Q 021350 103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK 140 (313)
Q Consensus 103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~ 140 (313)
.+.+.+. |..+.+.+-+.+....+.+.++-
T Consensus 501 v~~lq~~--------g~~VamvGDG~NDapAL~~AdvG 530 (675)
T TIGR01497 501 IRQEQAE--------GKLVAMTGDGTNDAPALAQADVG 530 (675)
T ss_pred HHHHHHc--------CCeEEEECCCcchHHHHHhCCEe
Confidence 2223222 56788888888887777776543
No 235
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=81.95 E-value=2.4 Score=36.85 Aligned_cols=42 Identities=19% Similarity=0.291 Sum_probs=31.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCc
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS 90 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~ 90 (313)
++|++.+.++.|++.|+++.++||+.. ......++.+|+...
T Consensus 96 ~~pg~~~~L~~L~~~g~~l~i~Tn~~~--~~~~~~l~~~~l~~~ 137 (229)
T PRK13226 96 LFDGVEGMLQRLECAGCVWGIVTNKPE--YLARLILPQLGWEQR 137 (229)
T ss_pred eCCCHHHHHHHHHHCCCeEEEECCCCH--HHHHHHHHHcCchhc
Confidence 467888899999999999999998653 334456677787643
No 236
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=81.90 E-value=2.6 Score=40.06 Aligned_cols=63 Identities=13% Similarity=0.146 Sum_probs=41.9
Q ss_pred CccEEEEeccceeecCCcc------------CccHHHHHHHHHHCCCcEEEEeCCCC----CchHHHHHHHhCCCCCcc
Q 021350 29 RFKAWLLDQFGVLHDGKKP------------YPGAISTLEMLATTGAKMVVISNSSR----RASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~------------~~~a~~~l~~l~~~g~~~~~~Tn~~~----~~~~~~~~l~~~G~~~~~ 91 (313)
..+.|++|+||||..+.-+ .-+++...-..-++|+.+.++|..+. .++.+.+..++-|...+.
T Consensus 374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpd 452 (580)
T COG5083 374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPD 452 (580)
T ss_pred CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCC
Confidence 6789999999999985432 12344444455579999999994331 124556666777776555
No 237
>PRK10671 copA copper exporting ATPase; Provisional
Probab=81.44 E-value=9.7 Score=39.93 Aligned_cols=100 Identities=19% Similarity=0.220 Sum_probs=67.6
Q ss_pred ccEEEEeccceee----cCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-HHH
Q 021350 30 FKAWLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-THQ 104 (313)
Q Consensus 30 ~k~iifDlDGTL~----~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~~~ 104 (313)
...+.+-.||++. -.+++.|++.+.++.|++.|+++.++|+ .........++++|++... .++...... ..+
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tg--d~~~~a~~ia~~lgi~~~~-~~~~p~~K~~~i~ 706 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTG--DNPTTANAIAKEAGIDEVI-AGVLPDGKAEAIK 706 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcC--CCHHHHHHHHHHcCCCEEE-eCCCHHHHHHHHH
Confidence 4567777787744 4677889999999999999999999994 4455566677789997433 444322221 222
Q ss_pred HHHhcCchhhhhcCCeEEEeecCcccchhhccCCcc
Q 021350 105 YLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGLK 140 (313)
Q Consensus 105 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~~ 140 (313)
.+.+. +.++.+++-+.++...+...|+-
T Consensus 707 ~l~~~--------~~~v~~vGDg~nD~~al~~Agvg 734 (834)
T PRK10671 707 RLQSQ--------GRQVAMVGDGINDAPALAQADVG 734 (834)
T ss_pred HHhhc--------CCEEEEEeCCHHHHHHHHhCCee
Confidence 22221 56788888888877777777653
No 238
>PRK09449 dUMP phosphatase; Provisional
Probab=81.28 E-value=1.8 Score=37.15 Aligned_cols=48 Identities=27% Similarity=0.373 Sum_probs=35.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
++|++.+.|+.|+ .|+++.++||+. .......++.+|+.... +.++++
T Consensus 96 ~~~g~~~~L~~L~-~~~~~~i~Tn~~--~~~~~~~l~~~~l~~~f-d~v~~~ 143 (224)
T PRK09449 96 PLPGAVELLNALR-GKVKMGIITNGF--TELQQVRLERTGLRDYF-DLLVIS 143 (224)
T ss_pred cCccHHHHHHHHH-hCCeEEEEeCCc--HHHHHHHHHhCChHHHc-CEEEEE
Confidence 5788999999999 679999999865 34445567888886544 555554
No 239
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=80.75 E-value=2.4 Score=40.07 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=39.3
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
++||+.++|+.|++.|+++.++||+. ...+...++.+|+.... +.++++.
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~--~~~~~~~L~~lgL~~yF-d~Iv~sd 266 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRP--RKTLENAIGSIGIRGFF-SVIVAAE 266 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHcCCHHHc-eEEEecC
Confidence 56899999999999999999999654 55666778888987555 6666543
No 240
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=80.62 E-value=12 Score=38.89 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=77.4
Q ss_pred cCccEEEEeccceeec----CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH-H
Q 021350 28 RRFKAWLLDQFGVLHD----GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL-T 102 (313)
Q Consensus 28 ~~~k~iifDlDGTL~~----~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~-~ 102 (313)
+...++.+=+||+|.- ++++=|++..++..|++.|+++.++| |-.........++.|++.-. .++...... .
T Consensus 701 ~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLT--GDn~~aA~svA~~VGi~~V~-aev~P~~K~~~ 777 (951)
T KOG0207|consen 701 KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLT--GDNDAAARSVAQQVGIDNVY-AEVLPEQKAEK 777 (951)
T ss_pred cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEc--CCCHHHHHHHHHhhCcceEE-eccCchhhHHH
Confidence 3677899999999876 67788999999999999999999999 54455555666778876544 566555443 3
Q ss_pred HHHHHhcCchhhhhcCCeEEEeecCcccchhhccC--CccccC----CCCCCCEEEe
Q 021350 103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGL--GLKVVE----NVEEADFILA 153 (313)
Q Consensus 103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~--g~~~~~----~~~~~~~~~~ 153 (313)
.+.+.+. |..+..++-+.+....|... |+.+.. -.+.+|++++
T Consensus 778 Ik~lq~~--------~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLm 826 (951)
T KOG0207|consen 778 IKEIQKN--------GGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLM 826 (951)
T ss_pred HHHHHhc--------CCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEE
Confidence 3334333 35667777788777655543 433221 1244566666
No 241
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=80.58 E-value=2.9 Score=36.75 Aligned_cols=59 Identities=14% Similarity=0.109 Sum_probs=44.3
Q ss_pred EEEEeccceeecCCcc---------------------------------Ccc--HHHHHHHHHHCCCcEEEEeCCCCC-c
Q 021350 32 AWLLDQFGVLHDGKKP---------------------------------YPG--AISTLEMLATTGAKMVVISNSSRR-A 75 (313)
Q Consensus 32 ~iifDlDGTL~~~~~~---------------------------------~~~--a~~~l~~l~~~g~~~~~~Tn~~~~-~ 75 (313)
+|+||+||||+++... +|. +.++|+.++++|+++.++||.... .
T Consensus 65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~ 144 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT 144 (237)
T ss_pred EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence 9999999999996551 111 778899999999999999986543 3
Q ss_pred hHH-HHHHHhCCCCCc
Q 021350 76 STT-IDKLKSLGFDPS 90 (313)
Q Consensus 76 ~~~-~~~l~~~G~~~~ 90 (313)
+.. ...++.+|++..
T Consensus 145 ~~~a~~ll~~lGi~~~ 160 (237)
T TIGR01672 145 DTVSKTLAKNFHIPAM 160 (237)
T ss_pred HHHHHHHHHHhCCchh
Confidence 444 444567999753
No 242
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=80.23 E-value=13 Score=38.01 Aligned_cols=91 Identities=11% Similarity=0.066 Sum_probs=57.2
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
...++.+++++.|++.|++. .+|.+... +-.+.-..+|... ++.--.|+-=..+.+.+.-.-+-+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~------------TA~aIA~elGI~~-v~A~~~PedK~~iV~~lQ~~G~~Va 507 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNEL------------TAATIAKEAGVDR-FVAECKPEDKINVIREEQAKGHIVA 507 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHH------------HHHHHHHHcCCce-EEcCCCHHHHHHHHHHHHhCCCEEE
Confidence 34589999999999999988 56654331 1112222345433 2233345555555555543335688
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
|+||.. ||--+.++|.+ +|.+.+|.
T Consensus 508 MtGDGv-NDAPALa~ADV-GIAMgsGT 532 (673)
T PRK14010 508 MTGDGT-NDAPALAEANV-GLAMNSGT 532 (673)
T ss_pred EECCCh-hhHHHHHhCCE-EEEeCCCC
Confidence 999997 99999999984 45555543
No 243
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=80.08 E-value=2.8 Score=35.82 Aligned_cols=51 Identities=22% Similarity=0.387 Sum_probs=39.8
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
.+++|++.++|++|++. +++.++||+. ...+...++.+|+.... +.++++.
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~--~~~~~~~l~~~~l~~~f-d~i~~~~ 146 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGV--RETQYKRLRKSGLFPFF-DDIFVSE 146 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCc--hHHHHHHHHHCCcHhhc-CEEEEcC
Confidence 35789999999999999 9999999865 45556678888987655 6666553
No 244
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=80.05 E-value=4.1 Score=35.31 Aligned_cols=52 Identities=29% Similarity=0.422 Sum_probs=40.9
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~ 100 (313)
+++||+.++++.|+++|+++..+||+. .......|+..|+.... +.++++..
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~--~~~~~~~L~~~gl~~~f-~~~v~~~d 137 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSP--RRAAERVLARLGLLDYF-DVIVTADD 137 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCCh--HHHHHHHHHHccChhhc-chhccHHH
Confidence 678999999999999999998888543 55667778888987666 66666653
No 245
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=79.61 E-value=3.9 Score=34.19 Aligned_cols=40 Identities=18% Similarity=0.093 Sum_probs=28.3
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++|++.+.|+.|+++|+++.++||+. ...+...++.+|+.
T Consensus 81 ~~~g~~e~l~~l~~~g~~~~IvS~~~--~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 81 LRDYAEELVRWLKEKGLKTAIVSGGI--MCLAKKVAEKLNPD 120 (201)
T ss_pred CCccHHHHHHHHHHCCCEEEEEeCCc--HHHHHHHHHHhCCC
Confidence 46777888888888888888888653 33444556667764
No 246
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=79.49 E-value=4.4 Score=34.61 Aligned_cols=47 Identities=28% Similarity=0.438 Sum_probs=34.8
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCccccccc
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAI 96 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii 96 (313)
++|++.++++.|++.|+++.++||+. .......++.+|+.... +.++
T Consensus 94 ~~~g~~~~l~~l~~~g~~~~i~S~~~--~~~~~~~l~~~~l~~~f-~~~~ 140 (226)
T PRK13222 94 LYPGVKETLAALKAAGYPLAVVTNKP--TPFVAPLLEALGIADYF-SVVI 140 (226)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHcCCccCc-cEEE
Confidence 56889999999999999999999764 34555677778886433 4443
No 247
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=79.19 E-value=3.6 Score=37.00 Aligned_cols=43 Identities=19% Similarity=0.286 Sum_probs=33.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
++|++.+.|+.|++.|+++.++||+. ...+...++.+|+....
T Consensus 143 l~pg~~e~L~~L~~~gi~laIvSn~~--~~~~~~~L~~~gl~~~F 185 (273)
T PRK13225 143 LFPGVADLLAQLRSRSLCLGILSSNS--RQNIEAFLQRQGLRSLF 185 (273)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHcCChhhe
Confidence 46888999999999999999999764 45566667888886443
No 248
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=78.71 E-value=4 Score=34.39 Aligned_cols=48 Identities=15% Similarity=0.113 Sum_probs=36.1
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccc
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAIT 97 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~ 97 (313)
..+++.+.|+.|++.|+++.++||+. ...+...++.+|+.... +.+++
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~--~~~~~~~l~~~gl~~~f-~~~~~ 154 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRP--RKDAAKFLTTHGLEILF-PVQIW 154 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCC--HHHHHHHHHHcCchhhC-CEEEe
Confidence 44566899999999999999999664 55667778888987544 44444
No 249
>PLN02954 phosphoserine phosphatase
Probab=78.36 E-value=4.2 Score=34.84 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=28.8
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++|++.++++.|+++|+++.++|++. ...+...++.+|++
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~--~~~i~~~l~~~gi~ 124 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGF--RQMIAPVAAILGIP 124 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCc--HHHHHHHHHHhCCC
Confidence 45788888888888888888888554 34455556677775
No 250
>PLN03190 aminophospholipid translocase; Provisional
Probab=78.20 E-value=79 Score=34.68 Aligned_cols=48 Identities=25% Similarity=0.207 Sum_probs=37.2
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
|.+--.+++-+++.+++++|++.|+++.++| |-..+.......+.|+-
T Consensus 719 G~~~~~D~lr~~v~~~I~~l~~agi~v~mlT--GD~~~tAi~IA~s~~Ll 766 (1178)
T PLN03190 719 GASAIEDKLQQGVPEAIESLRTAGIKVWVLT--GDKQETAISIGYSSKLL 766 (1178)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEEC--CCCHHHHHHHHHHhCCC
Confidence 4444466778899999999999999999999 65566666666666764
No 251
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=77.93 E-value=10 Score=39.28 Aligned_cols=97 Identities=12% Similarity=0.039 Sum_probs=65.7
Q ss_pred CccEEEEeccceee----cCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHH--H
Q 021350 29 RFKAWLLDQFGVLH----DGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGEL--T 102 (313)
Q Consensus 29 ~~k~iifDlDGTL~----~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~--~ 102 (313)
....+.+=.||++. -.+++.|++.++|++|++.|+++.++| +..........+++|++... + ..|.+. .
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llT--Gd~~~~a~~ia~~lgi~~~~--~-~~p~~K~~~ 621 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLT--GDNPRAAAAIAGELGIDFRA--G-LLPEDKVKA 621 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHHcCCCeec--C-CCHHHHHHH
Confidence 35667777777654 367888999999999999999999999 55566777778889997322 2 223222 2
Q ss_pred HHHHHhcCchhhhhcCCeEEEeecCcccchhhccCCc
Q 021350 103 HQYLLRRDDAWFAALGRSCIHMTWSDRGAISLEGLGL 139 (313)
Q Consensus 103 ~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~g~ 139 (313)
.+.+.+ +.++.+++-+.++...+...++
T Consensus 622 v~~l~~---------~~~v~mvGDgiNDapAl~~A~v 649 (741)
T PRK11033 622 VTELNQ---------HAPLAMVGDGINDAPAMKAASI 649 (741)
T ss_pred HHHHhc---------CCCEEEEECCHHhHHHHHhCCe
Confidence 233322 2456777777777666666543
No 252
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=77.78 E-value=3.8 Score=36.43 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=29.8
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++||+.+.|+.|+++|+++.++||+.+ ..+...++.+|+.
T Consensus 102 ~~pg~~elL~~L~~~g~~l~I~T~~~~--~~~~~~l~~~~l~ 141 (267)
T PRK13478 102 PIPGVLEVIAALRARGIKIGSTTGYTR--EMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCHHHHHHHHHHCCCEEEEEcCCcH--HHHHHHHHHHhhc
Confidence 578999999999999999999997653 3344445555543
No 253
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=77.28 E-value=22 Score=38.35 Aligned_cols=49 Identities=24% Similarity=0.258 Sum_probs=38.4
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
|.+-=.+++=+++.++|+.|++.|+++.++| |-..+......++.|+-.
T Consensus 624 G~~gieD~lq~~v~etI~~L~~AGIkv~mlT--GD~~~TA~~IA~~~~ii~ 672 (1057)
T TIGR01652 624 GATAIEDKLQEGVPETIELLRQAGIKIWVLT--GDKVETAINIGYSCRLLS 672 (1057)
T ss_pred EEEEEhhhhhhccHHHHHHHHHCCCeEEEEc--CCcHHHHHHHHHHhCCCC
Confidence 4444466777899999999999999999999 655666666677777743
No 254
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=75.56 E-value=5.4 Score=32.88 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=31.2
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
.+++|++.+.++.|++.|+++.++||+. ...+...++.+|+..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~--~~~~~~~l~~~~l~~ 113 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGN--DFFIDPVLEGIGEKD 113 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCc--HHHHHHHHHHcCChh
Confidence 4567888888989989999999998654 334445566677753
No 255
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=74.78 E-value=7.1 Score=35.17 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=34.4
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.-++.||+.++++.|++.|+++.++|++. ...+...|+++|+.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~--~~~Ie~vL~~lgl~ 161 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGI--GNVLEEVLRQAGVY 161 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCc--HHHHHHHHHHcCCC
Confidence 34678999999999999999999999543 45666667777874
No 256
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=74.38 E-value=6.6 Score=33.50 Aligned_cols=41 Identities=27% Similarity=0.258 Sum_probs=29.8
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
+.|++.++++.|+++|+++.++||+. .......++.+|+..
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~IvS~~~--~~~~~~~l~~~~i~~ 126 (219)
T TIGR00338 86 LTEGAEELVKTLKEKGYKVAVISGGF--DLFAEHVKDKLGLDA 126 (219)
T ss_pred cCCCHHHHHHHHHHCCCEEEEECCCc--HHHHHHHHHHcCCCc
Confidence 56788888888988899999888653 334455566677753
No 257
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=74.29 E-value=4.2 Score=34.77 Aligned_cols=51 Identities=24% Similarity=0.392 Sum_probs=38.5
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~ 100 (313)
+..+++.+.++.+++. +++.++||+. .......++++|+.... +.++.+..
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~--~~~~~~~l~~~gl~~~F-d~v~~s~~ 149 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGA--RPHQERKLRQLGLLDYF-DAVFISED 149 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCC--hHHHHHHHHHcCChhhh-heEEEecc
Confidence 4566777788888877 8899999973 45667778899987665 78877753
No 258
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=74.18 E-value=5.5 Score=35.65 Aligned_cols=43 Identities=26% Similarity=0.415 Sum_probs=32.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
++|++.+.|+.|++.|+++.++||+. ...+...++.+|+....
T Consensus 102 ~~~g~~e~L~~Lk~~g~~l~ivTn~~--~~~~~~~l~~~~i~~~f 144 (272)
T PRK13223 102 VYPGVRDTLKWLKKQGVEMALITNKP--ERFVAPLLDQMKIGRYF 144 (272)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCc--HHHHHHHHHHcCcHhhC
Confidence 57899999999999999999999764 33455566777776433
No 259
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=74.09 E-value=5.2 Score=38.75 Aligned_cols=49 Identities=10% Similarity=0.162 Sum_probs=37.1
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
++||+.+.|+.|+++|+++.++||+. .+.....++.+|+.... +.++++
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~~~--~~~~~~~l~~~~l~~~f-~~i~~~ 379 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASNGL--TEYLRAIVSYYDLDQWV-TETFSI 379 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCc--hHHHHHHHHHCCcHhhc-ceeEec
Confidence 46899999999999999999999754 45566677888886544 555443
No 260
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=73.20 E-value=36 Score=29.94 Aligned_cols=28 Identities=0% Similarity=0.147 Sum_probs=23.3
Q ss_pred CCCHHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 168 PMSLQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 168 ~~~~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
...++++.+.++.++++|.++ ++||.+.
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~ 141 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTA 141 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 356789999999999999998 8898643
No 261
>PLN02940 riboflavin kinase
Probab=73.07 E-value=5.6 Score=37.62 Aligned_cols=50 Identities=24% Similarity=0.373 Sum_probs=36.6
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHH-hCCCCCcccccccchH
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLK-SLGFDPSLFAGAITSG 99 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~-~~G~~~~~~~~ii~~~ 99 (313)
++|++.+.|++|+++|+++.++||+. ...+...++ ..|+.... +.++++.
T Consensus 94 l~pGv~elL~~Lk~~g~~l~IvTn~~--~~~~~~~l~~~~gl~~~F-d~ii~~d 144 (382)
T PLN02940 94 ALPGANRLIKHLKSHGVPMALASNSP--RANIEAKISCHQGWKESF-SVIVGGD 144 (382)
T ss_pred CCcCHHHHHHHHHHCCCcEEEEeCCc--HHHHHHHHHhccChHhhC-CEEEehh
Confidence 46888999999999999999999875 334445565 57776544 6666654
No 262
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=72.52 E-value=21 Score=38.49 Aligned_cols=46 Identities=24% Similarity=0.194 Sum_probs=35.1
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
.+++=+|+++.|++|++.|+++.++| |-..+......-++++-...
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLT--GDK~ETAiNIg~sC~Ll~~~ 694 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLT--GDKQETAINIGYSCRLLRQD 694 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEc--CcHHHHHHHHHHhhcCCCCC
Confidence 45666789999999999999999999 76667666666565554433
No 263
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=71.59 E-value=35 Score=34.93 Aligned_cols=90 Identities=11% Similarity=0.099 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
...++++++++.|++.|++. ++|.+... +-.+.-..+|... ++.--.|+-=....+.+.-.-+-+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~------------TA~aIA~elGId~-v~A~~~PedK~~iV~~lQ~~G~~Va 511 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPL------------TAAAIAAEAGVDD-FLAEATPEDKLALIRQEQAEGRLVA 511 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHH------------HHHHHHHHcCCcE-EEccCCHHHHHHHHHHHHHcCCeEE
Confidence 34589999999999999988 56654331 1111222344432 3334445554455555533335689
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
|+||.. ||--+.++|.+ +|.+.+|
T Consensus 512 MtGDGv-NDAPALa~ADV-GIAMgsG 535 (679)
T PRK01122 512 MTGDGT-NDAPALAQADV-GVAMNSG 535 (679)
T ss_pred EECCCc-chHHHHHhCCE-eEEeCCC
Confidence 999997 99999999983 4555555
No 264
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=71.55 E-value=5.5 Score=30.33 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=41.4
Q ss_pred ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++.+++||-++-.-....+..-.+..+.++.+|.+++++. ....+.+.+...|+.
T Consensus 48 ~~~vIlD~s~v~~iDssgi~~L~~~~~~~~~~g~~~~l~~----~~~~v~~~l~~~~~~ 102 (117)
T PF01740_consen 48 IKNVILDMSGVSFIDSSGIQALVDIIKELRRRGVQLVLVG----LNPDVRRILERSGLI 102 (117)
T ss_dssp SSEEEEEETTESEESHHHHHHHHHHHHHHHHTTCEEEEES----HHHHHHHHHHHTTGH
T ss_pred ceEEEEEEEeCCcCCHHHHHHHHHHHHHHHHCCCEEEEEE----CCHHHHHHHHHcCCC
Confidence 6899999999955444444445567777889999999866 346778888888885
No 265
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=70.84 E-value=9.2 Score=31.53 Aligned_cols=25 Identities=8% Similarity=0.125 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
++++.++|+.|+++|+++ ++||...
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 578999999999999998 8998543
No 266
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=70.67 E-value=5.4 Score=37.25 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=52.5
Q ss_pred cEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCc
Q 021350 187 PMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQ 266 (313)
Q Consensus 187 ~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~ 266 (313)
.+++|+..++-...+.+..+.|.+....... ...-+||-+ .|+.+.+|+|- .-..|+|||.. ..-.+|++..|+
T Consensus 373 nVlvTttqLipalaKvLL~gLg~~fpiENIY--Sa~kiGKes--cFerI~~RFg~-K~~yvvIgdG~-eee~aAK~ln~P 446 (468)
T KOG3107|consen 373 NVLVTTTQLIPALAKVLLYGLGSSFPIENIY--SATKIGKES--CFERIQSRFGR-KVVYVVIGDGV-EEEQAAKALNMP 446 (468)
T ss_pred EEEEeccchhHHHHHHHHHhcCCcccchhhh--hhhhccHHH--HHHHHHHHhCC-ceEEEEecCcH-HHHHHHHhhCCc
Confidence 4566665554434444444444332221110 012355655 99999999996 67889999996 667899999999
Q ss_pred EEEEcCC
Q 021350 267 SVFIIGG 273 (313)
Q Consensus 267 ~i~V~~G 273 (313)
++-|...
T Consensus 447 fwrI~~h 453 (468)
T KOG3107|consen 447 FWRISSH 453 (468)
T ss_pred eEeeccC
Confidence 9988763
No 267
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=70.57 E-value=9.6 Score=31.07 Aligned_cols=40 Identities=25% Similarity=0.300 Sum_probs=30.1
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+.|++.+.++.++++|+++.++|++. ...+...++.+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~--~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGF--DFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCc--HHHHHHHHHHcCCc
Confidence 45889999999999999999999543 34455556667775
No 268
>PRK00208 thiG thiazole synthase; Reviewed
Probab=70.25 E-value=55 Score=28.97 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEcCCc--hhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 225 GKPDKIIYKSAMAMVGVDACDSIAVGDSL--HHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 225 gKP~~~~~~~~~~~lgv~~~~~v~IGDs~--~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
|--+|+.++.+.+..++ .|+++=.+ ..|..-|.++|++.|+|.|+..+..
T Consensus 160 gi~~~~~i~~i~e~~~v----pVIveaGI~tpeda~~AmelGAdgVlV~SAItka~ 211 (250)
T PRK00208 160 GLLNPYNLRIIIEQADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAVAG 211 (250)
T ss_pred CCCCHHHHHHHHHhcCC----eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhCCC
Confidence 44457788888776443 35665443 4899999999999999999998644
No 269
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=69.93 E-value=16 Score=27.20 Aligned_cols=56 Identities=11% Similarity=0.114 Sum_probs=40.5
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+.+.+++|+-|+=+=....+.--...++.++++|..+.++. ....+.+.|+..|+.
T Consensus 38 ~~~~vilDls~v~~iDssgi~~L~~~~~~~~~~g~~l~l~~----~~~~v~~~l~~~gl~ 93 (106)
T TIGR02886 38 PIKHLILNLKNVTFMDSSGLGVILGRYKKIKNEGGEVIVCN----VSPAVKRLFELSGLF 93 (106)
T ss_pred CCCEEEEECCCCcEecchHHHHHHHHHHHHHHcCCEEEEEe----CCHHHHHHHHHhCCc
Confidence 56899999999854433333333456777888999998866 356778888888886
No 270
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=69.45 E-value=23 Score=31.64 Aligned_cols=87 Identities=16% Similarity=0.088 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCH--HHHHHHHHHhCCCCCcE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDK--IIYKSAMAMVGVDACDS 246 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~--~~~~~~~~~lgv~~~~~ 246 (313)
.+++..++++.++++|+++ ++||...... ..+...+..+|.... ..++-. ......+++......++
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~---------~~~~~~l~~~G~~~~-~~~i~ts~~~~~~~l~~~~~~~~~v 88 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSR---------AEYALKFARLGFNGL-AEQLFSSALCAARLLRQPPDAPKAV 88 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCH---------HHHHHHHHHcCCCCC-hhhEecHHHHHHHHHHhhCcCCCEE
Confidence 3567899999999999998 7888543111 112223333332111 112211 23333444444456789
Q ss_pred EEEcCCchhhHHHHHHcCCcEE
Q 021350 247 IAVGDSLHHDIKGANAAGIQSV 268 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~~i 268 (313)
+++|+. ......+..|+..+
T Consensus 89 ~~iG~~--~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 89 YVIGEE--GLRAELDAAGIRLA 108 (279)
T ss_pred EEEcCH--HHHHHHHHCCCEEe
Confidence 999986 23455677787644
No 271
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=68.82 E-value=2.6 Score=41.30 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=16.3
Q ss_pred ccEEEEeccceeecCCccCc
Q 021350 30 FKAWLLDQFGVLHDGKKPYP 49 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~ 49 (313)
-++++||+||||+.+...++
T Consensus 22 ~~~~~FDfDGTLt~~~s~f~ 41 (497)
T PLN02177 22 NQTVAADLDGTLLISRSAFP 41 (497)
T ss_pred ccEEEEecCCcccCCCCccH
Confidence 46899999999999765555
No 272
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=68.59 E-value=9.3 Score=32.95 Aligned_cols=42 Identities=31% Similarity=0.350 Sum_probs=32.7
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
++.|++.+.++.+++.|.+++++| +....-+.+..+.+|++.
T Consensus 77 ~l~~ga~elv~~lk~~G~~v~iiS--gg~~~lv~~ia~~lg~d~ 118 (212)
T COG0560 77 RLTPGAEELVAALKAAGAKVVIIS--GGFTFLVEPIAERLGIDY 118 (212)
T ss_pred cCCccHHHHHHHHHHCCCEEEEEc--CChHHHHHHHHHHhCCch
Confidence 467899999999999999999999 544444555567788873
No 273
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=68.24 E-value=9.3 Score=28.65 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCce--eecCCCCHHHHHHHHHHhCCCCCcE
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEV--RWMGKPDKIIYKSAMAMVGVDACDS 246 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~gKP~~~~~~~~~~~lgv~~~~~ 246 (313)
.+++..++++.++++|.++ ++||.....+ ..+...+..+|... ..+--|...+-.++.++ ....++
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~---------~~~~~~L~~~Gi~~~~~~i~ts~~~~~~~l~~~--~~~~~v 83 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSR---------EEYAKKLKKLGIPVDEDEIITSGMAAAEYLKEH--KGGKKV 83 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-H---------HHHHHHHHHTTTT--GGGEEEHHHHHHHHHHHH--TTSSEE
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCH---------HHHHHHHHhcCcCCCcCEEEChHHHHHHHHHhc--CCCCEE
Confidence 3588999999999999998 8999655222 12333344433211 11111121222333333 345677
Q ss_pred EEEcCCchhhHHHHHHcCC
Q 021350 247 IAVGDSLHHDIKGANAAGI 265 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~ 265 (313)
.++|-. ...+.++.+|+
T Consensus 84 ~vlG~~--~l~~~l~~~G~ 100 (101)
T PF13344_consen 84 YVLGSD--GLREELREAGF 100 (101)
T ss_dssp EEES-H--HHHHHHHHTTE
T ss_pred EEEcCH--HHHHHHHHcCC
Confidence 777765 44556666654
No 274
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=67.51 E-value=17 Score=26.24 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=39.3
Q ss_pred ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.+.+++|+.++=.-....+.--.+..++++++|..+.+.. ...++.+.++.+|+.
T Consensus 38 ~~~viid~~~v~~iDs~g~~~L~~l~~~~~~~g~~v~i~~----~~~~~~~~l~~~gl~ 92 (99)
T cd07043 38 PRRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRLVLVN----VSPAVRRVLELTGLD 92 (99)
T ss_pred CCEEEEECCCCCEEcchhHHHHHHHHHHHHHcCCeEEEEc----CCHHHHHHHHHhCcc
Confidence 5899999999844334444445567777888998877654 246788888888876
No 275
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=67.03 E-value=41 Score=30.20 Aligned_cols=29 Identities=10% Similarity=0.141 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCcccc
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDYVTV 198 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~ 198 (313)
.+++..+.++.++++|+++ ++||.....+
T Consensus 25 ~ipga~e~l~~L~~~g~~~iflTNn~~~s~ 54 (269)
T COG0647 25 AIPGAAEALKRLKAAGKPVIFLTNNSTRSR 54 (269)
T ss_pred cCchHHHHHHHHHHcCCeEEEEeCCCCCCH
Confidence 4589999999999999998 7899665444
No 276
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=66.92 E-value=6 Score=33.37 Aligned_cols=29 Identities=31% Similarity=0.490 Sum_probs=25.7
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCC
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRR 74 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~ 74 (313)
.++|++.+.|+.|+++|+++.++||+.+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~ 112 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRL 112 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchh
Confidence 46899999999999999999999997643
No 277
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=66.42 E-value=6.8 Score=34.03 Aligned_cols=29 Identities=28% Similarity=0.375 Sum_probs=26.0
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCC
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRR 74 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~ 74 (313)
+++|++.++|++|+++|+++.++||+++.
T Consensus 95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~ 123 (220)
T TIGR01691 95 HLYPDVPPALEAWLQLGLRLAVYSSGSVP 123 (220)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 57899999999999999999999987643
No 278
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=66.42 E-value=11 Score=31.65 Aligned_cols=41 Identities=24% Similarity=0.303 Sum_probs=31.8
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.+.|++.+.++.++++|.++.++|++. ..-+...++.+|++
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~--~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASL--TILVKPLARILGID 127 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCc--HHHHHHHHHHcCCc
Confidence 467899999999999999999999654 33344455677875
No 279
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=65.81 E-value=21 Score=26.53 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=39.4
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
..+.+++|+.++=.-+...+.--.+..+.++++|..+.++. ..+.+.+.++..|+.
T Consensus 42 ~~~~vvidls~v~~iDssgl~~L~~~~~~~~~~~~~~~l~~----~~~~~~~~l~~~~l~ 97 (108)
T TIGR00377 42 GPRPIVLDLEDLEFMDSSGLGVLLGRYKQVRRVGGQLVLVS----VSPRVARLLDITGLL 97 (108)
T ss_pred CCCeEEEECCCCeEEccccHHHHHHHHHHHHhcCCEEEEEe----CCHHHHHHHHHhChh
Confidence 57899999999844333333334456667788898887765 356778888888886
No 280
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=65.48 E-value=13 Score=31.78 Aligned_cols=40 Identities=25% Similarity=0.438 Sum_probs=30.5
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++.|++.++|+.+++.+ +++++|++. ..-....++++|++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~--~~~~~~il~~lgi~ 107 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTF--YEFSQPLMRQLGFP 107 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCCh--HHHHHHHHHHcCCc
Confidence 46789999999999875 899999553 34455567788886
No 281
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=65.07 E-value=16 Score=27.36 Aligned_cols=57 Identities=19% Similarity=0.201 Sum_probs=41.3
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
..+.+++|+-|+=+-....+..-.+..++++..|..+.++. ....+.+.|+..|+..
T Consensus 40 ~~~~vvlDls~v~~iDssg~~~l~~~~~~~~~~g~~l~l~g----~~~~v~~~l~~~gl~~ 96 (109)
T cd07041 40 RARGVIIDLTGVPVIDSAVARHLLRLARALRLLGARTILTG----IRPEVAQTLVELGIDL 96 (109)
T ss_pred CCCEEEEECCCCchhcHHHHHHHHHHHHHHHHcCCeEEEEe----CCHHHHHHHHHhCCCh
Confidence 57899999999854433333344556677888999998865 3467788888888864
No 282
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=64.69 E-value=20 Score=28.23 Aligned_cols=57 Identities=12% Similarity=0.075 Sum_probs=38.2
Q ss_pred cEEEEeccceeec--------CCc--cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 31 KAWLLDQFGVLHD--------GKK--PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 31 k~iifDlDGTL~~--------~~~--~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
..+.+|+|++++. +.+ .++.+...|..|+++|+....++++.. ++-..+.|+.+.+.
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~a-p~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMA-PQIASQGLETFKVK 85 (144)
T ss_pred EEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCC-HHHHHHHHHHhccC
Confidence 3566777777765 122 368899999999999999998886442 23334555555554
No 283
>PLN02811 hydrolase
Probab=64.26 E-value=8.6 Score=32.99 Aligned_cols=30 Identities=20% Similarity=0.345 Sum_probs=26.2
Q ss_pred CCccCccHHHHHHHHHHCCCcEEEEeCCCC
Q 021350 44 GKKPYPGAISTLEMLATTGAKMVVISNSSR 73 (313)
Q Consensus 44 ~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~ 73 (313)
...++|++.++|+.|++.|+++.++||+.+
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~ 105 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHK 105 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCch
Confidence 345689999999999999999999998764
No 284
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=63.23 E-value=92 Score=27.56 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhCCCcEE-EEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcC
Q 021350 173 DLEKILEICASKKIPMV-VANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGD 251 (313)
Q Consensus 173 ~~~~~l~~l~~~g~~~i-~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGD 251 (313)
..-+..+.|.+.|+..+ ++++|......-. .+++..+..+-+-+| ...|--+|+.++.+.+..++ .|+++=
T Consensus 111 ~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~-~~G~~~vmPlg~pIG---sg~Gi~~~~~I~~I~e~~~v----pVI~eg 182 (248)
T cd04728 111 ETLKAAEILVKEGFTVLPYCTDDPVLAKRLE-DAGCAAVMPLGSPIG---SGQGLLNPYNLRIIIERADV----PVIVDA 182 (248)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HcCCCEeCCCCcCCC---CCCCCCCHHHHHHHHHhCCC----cEEEeC
Confidence 34444455556799886 6666653321110 111111100001112 12344467788888776443 355553
Q ss_pred Cc--hhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 252 SL--HHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 252 s~--~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
.+ ..|..-|.++|.++|.|.|+..+..
T Consensus 183 GI~tpeda~~AmelGAdgVlV~SAIt~a~ 211 (248)
T cd04728 183 GIGTPSDAAQAMELGADAVLLNTAIAKAK 211 (248)
T ss_pred CCCCHHHHHHHHHcCCCEEEEChHhcCCC
Confidence 32 3899999999999999999998644
No 285
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=62.35 E-value=12 Score=34.86 Aligned_cols=28 Identities=25% Similarity=0.281 Sum_probs=24.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRR 74 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~ 74 (313)
..|++.+.|++|++.|+++.++||+...
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~ 212 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYD 212 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 3689999999999999999999998643
No 286
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=62.18 E-value=15 Score=31.50 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=27.0
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL 85 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~ 85 (313)
+.||+.++++.++++|+++.++||+.+ ..+...++.+
T Consensus 75 l~pG~~e~l~~l~~~g~~~~IvS~~~~--~~i~~il~~~ 111 (219)
T PRK09552 75 IREGFHEFVQFVKENNIPFYVVSGGMD--FFVYPLLQGL 111 (219)
T ss_pred cCcCHHHHHHHHHHcCCeEEEECCCcH--HHHHHHHHHh
Confidence 568888899999999999999997643 3334445554
No 287
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=62.00 E-value=11 Score=29.94 Aligned_cols=28 Identities=39% Similarity=0.442 Sum_probs=22.7
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRR 74 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~ 74 (313)
.++++.+.++.|+++|+++.++||+.+.
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~ 92 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLR 92 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchH
Confidence 3578888999999899999999976643
No 288
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=61.45 E-value=13 Score=33.48 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=27.4
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSL 85 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~ 85 (313)
++||+.+.|+.|+++|+++.++||+. ...+...++.+
T Consensus 145 l~pGv~elL~~L~~~g~~l~IvTn~~--~~~~~~~l~~~ 181 (286)
T PLN02779 145 LRPGVLRLMDEALAAGIKVAVCSTSN--EKAVSKIVNTL 181 (286)
T ss_pred chhhHHHHHHHHHHCCCeEEEEeCCC--HHHHHHHHHHh
Confidence 56889999999999999999999864 33333444443
No 289
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=61.32 E-value=5.2 Score=38.95 Aligned_cols=21 Identities=14% Similarity=0.205 Sum_probs=16.9
Q ss_pred CccEEEEeccceeecCCccCc
Q 021350 29 RFKAWLLDQFGVLHDGKKPYP 49 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~ 49 (313)
+.++++||+||||+.+...+|
T Consensus 7 ~~~~~~fD~DGTLlrs~ssFp 27 (498)
T PLN02499 7 TSYSVVSELEGTLLKDADPFS 27 (498)
T ss_pred ccceEEEecccceecCCCccH
Confidence 457899999999998666554
No 290
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=60.46 E-value=75 Score=33.18 Aligned_cols=56 Identities=14% Similarity=0.295 Sum_probs=38.5
Q ss_pred cEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 31 k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
+..+.-+=|- + +++-+++.++++.+++.|+++.++| |-..+......++.|+....
T Consensus 572 ~LtFvGlVGi-~--DPPR~ev~~ai~~c~~aGIrV~mIT--GD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 572 DLTFVGLVGI-L--DPPRPEVADAIELCRQAGIRVIMIT--GDNKETAEAIAREIGIFSED 627 (972)
T ss_pred ceEEEEEeec-c--CCCchhHHHHHHHHHHcCCEEEEEc--CCCHHHHHHHHHHhCCCcCC
Confidence 4444444442 2 3455789999999999999999999 54455555566677876443
No 291
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=60.01 E-value=25 Score=25.94 Aligned_cols=56 Identities=13% Similarity=0.095 Sum_probs=40.7
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
..+.+++|+-|+=+-....+..-.+..+.+++.|.++.++. ....+.+.++..|+.
T Consensus 38 ~~~~vilDls~v~~iDssgl~~L~~l~~~~~~~g~~l~l~~----~~~~v~~~l~~~gl~ 93 (100)
T cd06844 38 AGKTIVIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTG----ISPAVRITLTESGLD 93 (100)
T ss_pred CCCEEEEECCCCcEEcHHHHHHHHHHHHHHHHcCCEEEEEC----CCHHHHHHHHHhCch
Confidence 47899999999855444443344566777888999988765 346778888888875
No 292
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=59.53 E-value=31 Score=28.59 Aligned_cols=96 Identities=20% Similarity=0.209 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
++..++-.++..++..+-++ +++.++... .+..+-+.++.+....---+++-+..+++++.- ..--+
T Consensus 61 ~s~~Dil~al~~a~~~~~~Iavv~~~~~~~-----------~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~-~G~~v 128 (176)
T PF06506_consen 61 ISGFDILRALAKAKKYGPKIAVVGYPNIIP-----------GLESIEELLGVDIKIYPYDSEEEIEAAIKQAKA-EGVDV 128 (176)
T ss_dssp --HHHHHHHHHHCCCCTSEEEEEEESS-SC-----------CHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHH-TT--E
T ss_pred CCHhHHHHHHHHHHhcCCcEEEEecccccH-----------HHHHHHHHhCCceEEEEECCHHHHHHHHHHHHH-cCCcE
Confidence 45567777777777667677 555444321 122222334444333333445567777666521 22457
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
.||+.. . ...|++.|++++++.+|..+-.
T Consensus 129 iVGg~~-~-~~~A~~~gl~~v~i~sg~esi~ 157 (176)
T PF06506_consen 129 IVGGGV-V-CRLARKLGLPGVLIESGEESIR 157 (176)
T ss_dssp EEESHH-H-HHHHHHTTSEEEESS--HHHHH
T ss_pred EECCHH-H-HHHHHHcCCcEEEEEecHHHHH
Confidence 899995 4 7999999999999998765443
No 293
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=57.55 E-value=16 Score=39.51 Aligned_cols=49 Identities=22% Similarity=0.423 Sum_probs=35.0
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 48 ~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
+||+.+.|+.|+++|+++.++||+. ...+...++.+|+....++.++++
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~--~~~~~~~L~~~gl~~~~Fd~iv~~ 211 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSAD--RIKVDANLAAAGLPLSMFDAIVSA 211 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCc--HHHHHHHHHHcCCChhHCCEEEEC
Confidence 5677788889999999999999764 445556678888853223555543
No 294
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=56.71 E-value=1e+02 Score=28.87 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=35.9
Q ss_pred CCcc-CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 44 GKKP-YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 44 ~~~~-~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++.+ .++..+.++.+++.|+.+.+.||.....++..+.|.+.|+.
T Consensus 71 GEPll~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~~~L~~~g~~ 116 (378)
T PRK05301 71 GEPLLRKDLEELVAHARELGLYTNLITSGVGLTEARLAALKDAGLD 116 (378)
T ss_pred CccCCchhHHHHHHHHHHcCCcEEEECCCccCCHHHHHHHHHcCCC
Confidence 4433 37788889999999999999999876677888888888875
No 295
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=56.51 E-value=24 Score=29.54 Aligned_cols=39 Identities=26% Similarity=0.476 Sum_probs=29.4
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++|++.++++.|+++ +++.++||+. .......++.+|++
T Consensus 69 ~~pg~~e~L~~L~~~-~~~~IvS~~~--~~~~~~~l~~~gl~ 107 (205)
T PRK13582 69 PLPGAVEFLDWLRER-FQVVILSDTF--YEFAGPLMRQLGWP 107 (205)
T ss_pred CCCCHHHHHHHHHhc-CCEEEEeCCc--HHHHHHHHHHcCCc
Confidence 368888999999988 8999999654 34445566777875
No 296
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=56.26 E-value=25 Score=29.94 Aligned_cols=67 Identities=16% Similarity=0.132 Sum_probs=48.8
Q ss_pred cchHHhhhhcCccEEEEeccceeec-------------------------------------------------------
Q 021350 19 NGLRHIAETRRFKAWLLDQFGVLHD------------------------------------------------------- 43 (313)
Q Consensus 19 ~~~~~~~~~~~~k~iifDlDGTL~~------------------------------------------------------- 43 (313)
..+.+++. +.+++.||+|-|++.
T Consensus 7 ~e~~~~~~--~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~ 84 (227)
T KOG1615|consen 7 SELAKLWR--SADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIK 84 (227)
T ss_pred HHHHHHHH--hcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhc
Confidence 35677888 899999999999832
Q ss_pred -CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 44 -GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 44 -~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
-.++.||+.+...+|+++|..++++| +....-+.....++|++.
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liS--GGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLIS--GGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEc--CChHHHHHHHHHHhCCcH
Confidence 12356788888888888888888888 544444444556678874
No 297
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=56.05 E-value=18 Score=29.79 Aligned_cols=49 Identities=18% Similarity=0.291 Sum_probs=35.4
Q ss_pred ccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchH
Q 021350 46 KPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSG 99 (313)
Q Consensus 46 ~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~ 99 (313)
.++| ..+.|..|++. +++.++||+. ...+...++.+|+.... +.++++.
T Consensus 88 ~~~~-~~e~L~~L~~~-~~l~I~T~~~--~~~~~~~l~~~~l~~~f-d~i~~~~ 136 (188)
T PRK10725 88 EPLP-LIEVVKAWHGR-RPMAVGTGSE--SAIAEALLAHLGLRRYF-DAVVAAD 136 (188)
T ss_pred CCcc-HHHHHHHHHhC-CCEEEEcCCc--hHHHHHHHHhCCcHhHc-eEEEehh
Confidence 4566 46889888765 8999999754 45666778889987654 6666654
No 298
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=56.04 E-value=32 Score=31.32 Aligned_cols=49 Identities=18% Similarity=0.278 Sum_probs=37.7
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCC-CcEEEEeCCCCCchHHHHHHH
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTG-AKMVVISNSSRRASTTIDKLK 83 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g-~~~~~~Tn~~~~~~~~~~~l~ 83 (313)
+++.+.|=++| ..++.|.-.+.|+.+++.| ++.+++||++. +++.+.|.
T Consensus 79 ~pd~vtis~~G----EPTLy~~L~elI~~~k~~g~~~tflvTNgsl--pdv~~~L~ 128 (296)
T COG0731 79 EPDHVTISLSG----EPTLYPNLGELIEEIKKRGKKTTFLVTNGSL--PDVLEELK 128 (296)
T ss_pred CCCEEEEeCCC----CcccccCHHHHHHHHHhcCCceEEEEeCCCh--HHHHHHhc
Confidence 56778887777 4456688999999999999 79999999886 55544443
No 299
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=55.10 E-value=11 Score=31.08 Aligned_cols=46 Identities=20% Similarity=0.348 Sum_probs=27.9
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
+++++.++|++|+ .++.++||+. ...+...++.+|+.... +.++++
T Consensus 85 ~~~g~~~~L~~L~---~~~~i~Tn~~--~~~~~~~l~~~gl~~~f-d~i~~~ 130 (184)
T TIGR01993 85 PDPELRNLLLRLP---GRKIIFTNGD--RAHARRALNRLGIEDCF-DGIFCF 130 (184)
T ss_pred CCHHHHHHHHhCC---CCEEEEeCCC--HHHHHHHHHHcCcHhhh-CeEEEe
Confidence 4566777776665 4677778655 34555666777775433 445444
No 300
>PRK11590 hypothetical protein; Provisional
Probab=53.84 E-value=28 Score=29.69 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=28.7
Q ss_pred ccCccHHHHH-HHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350 46 KPYPGAISTL-EMLATTGAKMVVISNSSRRASTTIDKLKSLGF 87 (313)
Q Consensus 46 ~~~~~a~~~l-~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~ 87 (313)
.++|++.+.| +.+++.|.+++++||+.+ .-+...++.+|+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~--~~~~~il~~l~~ 135 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQ--PLVEQVYFDTPW 135 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcH--HHHHHHHHHccc
Confidence 3478999999 467788999999996643 334445566675
No 301
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=53.66 E-value=85 Score=25.48 Aligned_cols=26 Identities=4% Similarity=0.042 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
..++..++++.++++|.++ ++|....
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~ 54 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPI 54 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcH
Confidence 3578899999999999988 6776543
No 302
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=53.41 E-value=6.3 Score=33.14 Aligned_cols=31 Identities=19% Similarity=0.330 Sum_probs=22.4
Q ss_pred EEEcCCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 247 IAVGDSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
++|.|++ .-+..+...|+.+|+..+...+..
T Consensus 139 vlIDD~~-~n~~~~~~~g~~~iLfd~p~Nr~~ 169 (191)
T PF06941_consen 139 VLIDDRP-HNLEQFANAGIPVILFDQPYNRDE 169 (191)
T ss_dssp EEEESSS-HHHSS-SSESSEEEEE--GGGTT-
T ss_pred EEecCCh-HHHHhccCCCceEEEEcCCCCCCC
Confidence 8999998 668989899999999988544433
No 303
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=53.30 E-value=21 Score=31.04 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=28.8
Q ss_pred eecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCc
Q 021350 41 LHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA 75 (313)
Q Consensus 41 L~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~ 75 (313)
++....+.||+.+.++.|...|+++.++|++.+..
T Consensus 87 ~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~ 121 (222)
T KOG2914|consen 87 LFMNSILMPGAEKLVNHLKNNGIPVALATSSTSAS 121 (222)
T ss_pred hccccccCCcHHHHHHHHHhCCCCeeEEecCCccc
Confidence 34456678999999999999999999999765443
No 304
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=53.25 E-value=11 Score=31.66 Aligned_cols=30 Identities=30% Similarity=0.623 Sum_probs=23.5
Q ss_pred eecCCccCccHHHHHHHHHHCCCcEEEEeC
Q 021350 41 LHDGKKPYPGAISTLEMLATTGAKMVVISN 70 (313)
Q Consensus 41 L~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn 70 (313)
++.+-+++|||.+++++|.+.|...+++|.
T Consensus 68 ~f~~l~p~~gA~e~l~~L~~~g~~~~~Ita 97 (191)
T PF06941_consen 68 FFSNLPPIPGAVEALKKLRDKGHEIVIITA 97 (191)
T ss_dssp TTTT--B-TTHHHHHHHHHTSTTEEEEEEE
T ss_pred hhcCCCccHHHHHHHHHHHHcCCcEEEEEe
Confidence 566778999999999999999988888873
No 305
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=52.95 E-value=15 Score=32.07 Aligned_cols=42 Identities=19% Similarity=0.228 Sum_probs=28.2
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 48 ~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
+|++.+.|+.|++. +++.++||+... ++..|+.... +.++++
T Consensus 115 ~~gv~~~L~~L~~~-~~l~i~Tn~~~~-------~~~~gl~~~f-d~i~~~ 156 (238)
T PRK10748 115 PQATHDTLKQLAKK-WPLVAITNGNAQ-------PELFGLGDYF-EFVLRA 156 (238)
T ss_pred CccHHHHHHHHHcC-CCEEEEECCCch-------HHHCCcHHhh-ceeEec
Confidence 36788899999865 889999986532 3556775444 445443
No 306
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=52.46 E-value=1.2e+02 Score=28.02 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=34.4
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 48 ~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.++..+.++.+++.|+.+.+.||.....++..+.|...|+.
T Consensus 67 ~~~~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~~L~~~g~~ 107 (358)
T TIGR02109 67 RPDLVELVAHARRLGLYTNLITSGVGLTEARLDALADAGLD 107 (358)
T ss_pred cccHHHHHHHHHHcCCeEEEEeCCccCCHHHHHHHHhCCCC
Confidence 47888999999999999999999876677888888888775
No 307
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=51.43 E-value=29 Score=29.62 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=29.5
Q ss_pred CccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCC
Q 021350 45 KKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLG 86 (313)
Q Consensus 45 ~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G 86 (313)
.++.|++.++++.+++.|+++.++|++. ...+...++.++
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~--~~~i~~il~~~~ 108 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGM--DFFVYPLLEGIV 108 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCc--HHHHHHHHHhhC
Confidence 4677999999999999999999999663 233444455543
No 308
>PRK04180 pyridoxal biosynthesis lyase PdxS; Provisional
Probab=50.84 E-value=1.9e+02 Score=26.21 Aligned_cols=49 Identities=18% Similarity=0.221 Sum_probs=39.5
Q ss_pred CCCHHHHHHHHHHhCCCCCcEE--EEcC--CchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 226 KPDKIIYKSAMAMVGVDACDSI--AVGD--SLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v--~IGD--s~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
.|..+.+..+.+..++| ++ ++|. ++ .|+..+.++|+.+|+|.++..+..
T Consensus 189 ~~~~elL~ei~~~~~iP---VV~~AeGGI~TP-edaa~vme~GAdgVaVGSaI~ks~ 241 (293)
T PRK04180 189 QAPYELVKEVAELGRLP---VVNFAAGGIATP-ADAALMMQLGADGVFVGSGIFKSG 241 (293)
T ss_pred CCCHHHHHHHHHhCCCC---EEEEEeCCCCCH-HHHHHHHHhCCCEEEEcHHhhcCC
Confidence 47778888888877765 55 8894 55 999999999999999999987544
No 309
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=50.82 E-value=1.5e+02 Score=29.48 Aligned_cols=91 Identities=16% Similarity=0.095 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
++.-++-.++..++..+-++ +++-+.... .+..+-+.++.+.....--+++-....++.+. ...--+
T Consensus 81 ~s~~Dil~al~~a~~~~~~ia~vg~~~~~~-----------~~~~~~~ll~~~i~~~~~~~~~e~~~~~~~l~-~~G~~~ 148 (526)
T TIGR02329 81 PTGFDVMQALARARRIASSIGVVTHQDTPP-----------ALRRFQAAFNLDIVQRSYVTEEDARSCVNDLR-ARGIGA 148 (526)
T ss_pred CChhhHHHHHHHHHhcCCcEEEEecCcccH-----------HHHHHHHHhCCceEEEEecCHHHHHHHHHHHH-HCCCCE
Confidence 34445666666666656566 554433311 11111122343332222222223334434332 122356
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
+|||.. + ...|+++|+++|++.+|
T Consensus 149 viG~~~-~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 149 VVGAGL-I-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred EECChH-H-HHHHHHcCCceEEEecH
Confidence 789996 5 68899999999999986
No 310
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=50.74 E-value=31 Score=31.81 Aligned_cols=40 Identities=20% Similarity=0.132 Sum_probs=26.4
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
+.|++.+.++.|++.|+++.++|++.... ....++++|+.
T Consensus 182 l~pGa~elL~~Lk~~G~~~aIvSgg~~~~--~~~l~~~Lgld 221 (322)
T PRK11133 182 LMPGLTELVLKLQALGWKVAIASGGFTYF--ADYLRDKLRLD 221 (322)
T ss_pred CChhHHHHHHHHHHcCCEEEEEECCcchh--HHHHHHHcCCC
Confidence 45777778888888888888888654322 22334456664
No 311
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=50.52 E-value=29 Score=33.37 Aligned_cols=61 Identities=16% Similarity=0.159 Sum_probs=44.3
Q ss_pred cEEEEeccceeecCC-c-cCccHHHHHHHHHHCCCcEEEEeCCCCCch----HHHHHHH-hCCCCCcc
Q 021350 31 KAWLLDQFGVLHDGK-K-PYPGAISTLEMLATTGAKMVVISNSSRRAS----TTIDKLK-SLGFDPSL 91 (313)
Q Consensus 31 k~iifDlDGTL~~~~-~-~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~----~~~~~l~-~~G~~~~~ 91 (313)
=+|+.=.||++.+=. . ..+.-.+.++.|++.|+|++++-|+.++.. .++..|+ +++.+...
T Consensus 147 IGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlp 214 (492)
T PF09547_consen 147 IGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLP 214 (492)
T ss_pred eeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEE
Confidence 468888999998733 2 334456799999999999999999887753 3455554 57877433
No 312
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=50.29 E-value=1.7e+02 Score=26.14 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHhCCCcEE-EEcCCccccccchhccCCchHHHHHHHhcCc-------e--eecCCCCHHHHHHHHHHhCC
Q 021350 172 QDLEKILEICASKKIPMV-VANPDYVTVEARALRVMPGTLASKFEKLGGE-------V--RWMGKPDKIIYKSAMAMVGV 241 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~i-~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~-------~--~~~gKP~~~~~~~~~~~lgv 241 (313)
-+.-++.+.|.+.|+.++ .+++|.+.. ..++..|.. + ...|-.+|..++.+.++.++
T Consensus 124 ~etl~Aae~Lv~eGF~VlPY~~~D~v~a-------------~rLed~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~v 190 (267)
T CHL00162 124 IGTLKAAEFLVKKGFTVLPYINADPMLA-------------KHLEDIGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKI 190 (267)
T ss_pred HHHHHHHHHHHHCCCEEeecCCCCHHHH-------------HHHHHcCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCC
Confidence 355566677888999873 556666332 223433332 2 34566788899999997654
Q ss_pred CCCcEEEEc--CCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 242 DACDSIAVG--DSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 242 ~~~~~v~IG--Ds~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
+ |++| =+-..|...|-+.|++.|++.||..+..+
T Consensus 191 p----VivdAGIgt~sDa~~AmElGaDgVL~nSaIakA~d 226 (267)
T CHL00162 191 P----VIIDAGIGTPSEASQAMELGASGVLLNTAVAQAKN 226 (267)
T ss_pred c----EEEeCCcCCHHHHHHHHHcCCCEEeecceeecCCC
Confidence 3 3333 23348999999999999999999886554
No 313
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=50.27 E-value=46 Score=25.35 Aligned_cols=57 Identities=16% Similarity=0.195 Sum_probs=40.9
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
..+.+++|+-|+=+-+.-...--...+..++..|.+++++. ..+.+++.+...|+..
T Consensus 43 ~~~~ivIDls~v~~~dS~gl~~L~~~~~~~~~~g~~~~l~~----i~p~v~~~~~~~gl~~ 99 (117)
T COG1366 43 GARGLVIDLSGVDFMDSAGLGVLVALLKSARLRGVELVLVG----IQPEVARTLELTGLDK 99 (117)
T ss_pred CCcEEEEECCCCceechHHHHHHHHHHHHHHhcCCeEEEEe----CCHHHHHHHHHhCchh
Confidence 45669999999855433333333456677889998888876 3567888899999973
No 314
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=49.92 E-value=84 Score=30.70 Aligned_cols=81 Identities=11% Similarity=0.112 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
-..++..+++..|++.|+.+ ++|.+...... ..-..++. .+.-.|+--....+.+.-.-..+.
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~------------~ia~~lgi----~~~~~p~~K~~~v~~l~~~g~~v~ 410 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAK------------AIAKELGI----FARVTPEEKAALVEALQKKGRVVA 410 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHH------------HHHHHcCc----eeccCHHHHHHHHHHHHHCCCEEE
Confidence 34578999999999999887 55554331110 00111121 122333333344443322336799
Q ss_pred EEcCCchhhHHHHHHcCCc
Q 021350 248 AVGDSLHHDIKGANAAGIQ 266 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~ 266 (313)
|+||.. ||..+.++|++.
T Consensus 411 ~vGDg~-nD~~al~~Advg 428 (499)
T TIGR01494 411 MTGDGV-NDAPALKKADVG 428 (499)
T ss_pred EECCCh-hhHHHHHhCCCc
Confidence 999997 999999999854
No 315
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated
Probab=48.82 E-value=1.7e+02 Score=25.03 Aligned_cols=48 Identities=27% Similarity=0.374 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEcC--CchhhHHHHHHcC-CcEEEEcCCCCCCc
Q 021350 227 PDKIIYKSAMAMVGVDACDSIAVGD--SLHHDIKGANAAG-IQSVFIIGGIHATE 278 (313)
Q Consensus 227 P~~~~~~~~~~~lgv~~~~~v~IGD--s~~~Di~~a~~aG-~~~i~V~~G~~~~~ 278 (313)
|+.+.+..+.+..++ .+++-|+ ++ .|+..+.+.| +..+.|.++.+...
T Consensus 177 ~d~~~i~~l~~~~~i---pvia~GGi~~~-~di~~~~~~g~~~gv~vg~a~~~~~ 227 (233)
T PRK00748 177 PNVEATRELAAAVPI---PVIASGGVSSL-DDIKALKGLGAVEGVIVGRALYEGK 227 (233)
T ss_pred CCHHHHHHHHHhCCC---CEEEeCCCCCH-HHHHHHHHcCCccEEEEEHHHHcCC
Confidence 777788888887654 3788884 43 7999999988 99999999866554
No 316
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=46.68 E-value=1e+02 Score=32.23 Aligned_cols=39 Identities=15% Similarity=0.232 Sum_probs=29.4
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 49 PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 49 ~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
...++++.+.++.|+++..+| +..+-......++.|+-.
T Consensus 593 ~~vP~Av~~CrsAGIkvimVT--gdhpiTAkAiA~~vgIi~ 631 (1019)
T KOG0203|consen 593 AAVPDAVGKCRSAGIKVIMVT--GDHPITAKAIAKSVGIIS 631 (1019)
T ss_pred ccCchhhhhhhhhCceEEEEe--cCccchhhhhhhheeeec
Confidence 456788999999999999999 655555555566677643
No 317
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=46.30 E-value=70 Score=29.32 Aligned_cols=71 Identities=14% Similarity=0.231 Sum_probs=46.6
Q ss_pred cccchHHhhhh-----cCccEEEEecc-----c--eeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHH
Q 021350 17 TLNGLRHIAET-----RRFKAWLLDQF-----G--VLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLK 83 (313)
Q Consensus 17 ~~~~~~~~~~~-----~~~k~iifDlD-----G--TL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~~~l~ 83 (313)
..+.+.++++. ..+++|.+|+| | ...=..+.+|+..+.+++|+++|+++++..+..... ....+.+.
T Consensus 22 ~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~kv~~~i~P~v~~~~~~y~e~~ 101 (319)
T cd06591 22 TQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQGWGEWKFDPERFPDPKAMVRELHEMNAELMISIWPTFGPETENYKEMD 101 (319)
T ss_pred CHHHHHHHHHHHHHhCCCccEEEEechhhcCCCceeEEEChhhCCCHHHHHHHHHHCCCEEEEEecCCcCCCChhHHHHH
Confidence 44455555541 35789999986 3 333245678999999999999999998877544332 33445555
Q ss_pred hCCC
Q 021350 84 SLGF 87 (313)
Q Consensus 84 ~~G~ 87 (313)
+.|+
T Consensus 102 ~~g~ 105 (319)
T cd06591 102 EKGY 105 (319)
T ss_pred HCCE
Confidence 5554
No 318
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=46.20 E-value=1.1e+02 Score=30.27 Aligned_cols=89 Identities=20% Similarity=0.163 Sum_probs=53.8
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhcCchhhhhcC
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWFAALG 118 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~~~~~~~~~g 118 (313)
|+++-.+..-||..|.+.+||+.|++-+++| +-.+-..+....+.|++.-- .+ .+|.....-.-.++.+ |
T Consensus 440 GVI~LkDivK~Gi~ERf~elR~MgIkTvM~T--GDN~~TAa~IA~EAGVDdfi-Ae-atPEdK~~~I~~eQ~~------g 509 (681)
T COG2216 440 GVIYLKDIVKPGIKERFAELRKMGIKTVMIT--GDNPLTAAAIAAEAGVDDFI-AE-ATPEDKLALIRQEQAE------G 509 (681)
T ss_pred EEEEehhhcchhHHHHHHHHHhcCCeEEEEe--CCCHHHHHHHHHHhCchhhh-hc-CChHHHHHHHHHHHhc------C
Confidence 5566666677999999999999999999999 54444555556677886211 11 1222222222222221 5
Q ss_pred CeEEEeecCcccchhhccC
Q 021350 119 RSCIHMTWSDRGAISLEGL 137 (313)
Q Consensus 119 ~~~~~~~~~~~~~~~l~~~ 137 (313)
+-+...+-+.+..-.+.+.
T Consensus 510 rlVAMtGDGTNDAPALAqA 528 (681)
T COG2216 510 RLVAMTGDGTNDAPALAQA 528 (681)
T ss_pred cEEEEcCCCCCcchhhhhc
Confidence 5555666666665555554
No 319
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=45.38 E-value=15 Score=30.47 Aligned_cols=29 Identities=17% Similarity=0.104 Sum_probs=0.0
Q ss_pred EEEeccceeecCCccCccHHHHHHHHHHC
Q 021350 33 WLLDQFGVLHDGKKPYPGAISTLEMLATT 61 (313)
Q Consensus 33 iifDlDGTL~~~~~~~~~a~~~l~~l~~~ 61 (313)
+.+|+||||.+.....|-.-.++++....
T Consensus 9 ~ciDIDGtit~~~t~~~~~n~~f~kslse 37 (194)
T COG5663 9 CCIDIDGTITDDPTFAPYLNPAFEKSLSE 37 (194)
T ss_pred eeeccCCceecCcccchhccHHHHhhhhh
No 320
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=45.38 E-value=40 Score=27.55 Aligned_cols=24 Identities=17% Similarity=0.092 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPD 194 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d 194 (313)
++++.++|+.|+++|+++ ++||..
T Consensus 31 ~pgv~e~L~~L~~~g~~l~IvSN~~ 55 (161)
T TIGR01261 31 EKGVIPALLKLKKAGYKFVMVTNQD 55 (161)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCc
Confidence 578999999999999998 899954
No 321
>COG4996 Predicted phosphatase [General function prediction only]
Probab=45.38 E-value=74 Score=25.40 Aligned_cols=71 Identities=7% Similarity=-0.004 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhc---CceeecCCCCHHHHHHHHH---------
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLG---GEVRWMGKPDKIIYKSAMA--------- 237 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~gKP~~~~~~~~~~--------- 237 (313)
++.+.+.+..++..|..+ ..|=.+.. .-.+++.+++ --...+-+|+|.-+..+.+
T Consensus 43 ~~~v~~~l~warnsG~i~~~~sWN~~~------------kA~~aLral~~~~yFhy~ViePhP~K~~ML~~llr~i~~er 110 (164)
T COG4996 43 FPDVKETLKWARNSGYILGLASWNFED------------KAIKALRALDLLQYFHYIVIEPHPYKFLMLSQLLREINTER 110 (164)
T ss_pred cHHHHHHHHHHHhCCcEEEEeecCchH------------HHHHHHHHhchhhhEEEEEecCCChhHHHHHHHHHHHHHhh
Confidence 689999999998888776 44421110 0011222222 2345667899875554433
Q ss_pred HhCCCCCcEEEEcCCc
Q 021350 238 MVGVDACDSIAVGDSL 253 (313)
Q Consensus 238 ~lgv~~~~~v~IGDs~ 253 (313)
...+.|++++++.|+-
T Consensus 111 ~~~ikP~~Ivy~DDR~ 126 (164)
T COG4996 111 NQKIKPSEIVYLDDRR 126 (164)
T ss_pred ccccCcceEEEEeccc
Confidence 2357999999999983
No 322
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=43.23 E-value=50 Score=32.27 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=42.0
Q ss_pred CccEEEEecc----ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350 29 RFKAWLLDQF----GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF 87 (313)
Q Consensus 29 ~~k~iifDlD----GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~ 87 (313)
.+..+.+=.+ |.+.-.+++-+++.++++.|++.|+++.++| +..........+++|+
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~lt--GD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISELREAGIRVIMLT--GDNVLTAKAIAKELGI 386 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEc--CCCHHHHHHHHHHcCc
Confidence 3455555444 4455578888999999999999999999999 6555555555666776
No 323
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=43.14 E-value=50 Score=28.24 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=22.8
Q ss_pred ccCccHHHHHH-HHHHCCCcEEEEeCCC
Q 021350 46 KPYPGAISTLE-MLATTGAKMVVISNSS 72 (313)
Q Consensus 46 ~~~~~a~~~l~-~l~~~g~~~~~~Tn~~ 72 (313)
.++|++.+.|+ .++++|.+++++||+.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~ 121 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSP 121 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCc
Confidence 45799999996 6788999999999765
No 324
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=43.11 E-value=69 Score=32.01 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=37.7
Q ss_pred EEEEeccceeec--CCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 32 AWLLDQFGVLHD--GKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 32 ~iifDlDGTL~~--~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.-++|+||-|++ |.+-+ .-.+.+....+.|+|++++|.-+..++.+.+...++|-.
T Consensus 257 iAvldldGevl~~~S~r~~-~~~eVve~I~~lG~PvvVAtDVtp~P~~V~KiAasf~A~ 314 (652)
T COG2433 257 IAVLDLDGEVLDLESRRGI-DRSEVVEFISELGKPVVVATDVTPAPETVKKIAASFNAV 314 (652)
T ss_pred EEEEecCCcEEeeeccccC-CHHHHHHHHHHcCCceEEEccCCCChHHHHHHHHHcCCc
Confidence 357899999888 33333 233556666789999999997554555665555666653
No 325
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=42.76 E-value=55 Score=29.15 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=35.3
Q ss_pred EEEEeccceeecCC--ccC---------------------c----cHHHHHHHHHHC----C--CcEEEEeCCC-CCchH
Q 021350 32 AWLLDQFGVLHDGK--KPY---------------------P----GAISTLEMLATT----G--AKMVVISNSS-RRAST 77 (313)
Q Consensus 32 ~iifDlDGTL~~~~--~~~---------------------~----~a~~~l~~l~~~----g--~~~~~~Tn~~-~~~~~ 77 (313)
-|.||-|+||.+.+ +.+ + .-...|.+++++ . ++..++|-.+ ...+.
T Consensus 123 RIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~R 202 (264)
T PF06189_consen 123 RIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHER 202 (264)
T ss_pred EEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHH
Confidence 38999999999832 222 1 112344455543 1 3456667422 22356
Q ss_pred HHHHHHhCCCCCcc
Q 021350 78 TIDKLKSLGFDPSL 91 (313)
Q Consensus 78 ~~~~l~~~G~~~~~ 91 (313)
+.+.|+..|+.++.
T Consensus 203 vI~TLr~Wgv~vDE 216 (264)
T PF06189_consen 203 VIRTLRSWGVRVDE 216 (264)
T ss_pred HHHHHHHcCCcHhH
Confidence 78888888887644
No 326
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=42.59 E-value=74 Score=30.07 Aligned_cols=113 Identities=17% Similarity=0.200 Sum_probs=63.4
Q ss_pred CCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc-----
Q 021350 147 EADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE----- 220 (313)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~----- 220 (313)
+...+...++.+|. +.++.+..-+..+.+.|+.+ +.||..........+.-..-.+.++.+.++..
T Consensus 90 ~sg~vf~~~~~dw~--------~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vPi~~~~ 161 (422)
T KOG2134|consen 90 KSGKVFPKGSMDWR--------ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVPIQLLA 161 (422)
T ss_pred CCcceeeccCccce--------eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCceEEee
Confidence 44555555555554 34455555566778889888 78885542221101000001111222222221
Q ss_pred ---eeecCCCCHHHHHHHHHHhC----CCCCcEEEEcC--------------CchhhHHHHHHcCCcE
Q 021350 221 ---VRWMGKPDKIIYKSAMAMVG----VDACDSIAVGD--------------SLHHDIKGANAAGIQS 267 (313)
Q Consensus 221 ---~~~~gKP~~~~~~~~~~~lg----v~~~~~v~IGD--------------s~~~Di~~a~~aG~~~ 267 (313)
.-...||...++++..+.++ ++-..+.++|| .-..|+..|.++|+..
T Consensus 162 A~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF 229 (422)
T KOG2134|consen 162 AIIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKF 229 (422)
T ss_pred eccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCcc
Confidence 12477999999999987653 44445556665 2347999999999754
No 327
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=41.62 E-value=31 Score=30.33 Aligned_cols=63 Identities=25% Similarity=0.246 Sum_probs=41.9
Q ss_pred EEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350 32 AWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100 (313)
Q Consensus 32 ~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~ 100 (313)
.-.||.-+ -....+.++..+++++||+.|..+.++||.....+ ..+..+|+.... +.++.|..
T Consensus 101 ~~~~s~~~--~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~---~~l~~~~l~~~f-D~vv~S~e 163 (237)
T KOG3085|consen 101 FRLFSTFA--PSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR---LLLLPLGLSAYF-DFVVESCE 163 (237)
T ss_pred hheecccc--ccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH---HHhhccCHHHhh-hhhhhhhh
Confidence 34445444 22345567888999999999988888887653333 556677887433 77777653
No 328
>PRK08238 hypothetical protein; Validated
Probab=41.20 E-value=48 Score=32.40 Aligned_cols=39 Identities=18% Similarity=0.206 Sum_probs=30.0
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGF 87 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~ 87 (313)
+.|++.+.+++++++|.++.++|++.+ ......++.+|+
T Consensus 73 ~~pga~e~L~~lk~~G~~v~LaTas~~--~~a~~i~~~lGl 111 (479)
T PRK08238 73 YNEEVLDYLRAERAAGRKLVLATASDE--RLAQAVAAHLGL 111 (479)
T ss_pred CChhHHHHHHHHHHCCCEEEEEeCCCH--HHHHHHHHHcCC
Confidence 458899999999999999999996643 334445566776
No 329
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=40.69 E-value=42 Score=28.53 Aligned_cols=40 Identities=30% Similarity=0.364 Sum_probs=24.9
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
++|++.++|+.| ++++.++||+. ...+...++.+|+....
T Consensus 89 ~~~gv~~~L~~L---~~~~~ivTn~~--~~~~~~~l~~~~l~~~F 128 (221)
T PRK10563 89 PIAGANALLESI---TVPMCVVSNGP--VSKMQHSLGKTGMLHYF 128 (221)
T ss_pred cCCCHHHHHHHc---CCCEEEEeCCc--HHHHHHHHHhcChHHhC
Confidence 345555565555 57888888764 34455567777776444
No 330
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=40.46 E-value=36 Score=23.97 Aligned_cols=45 Identities=29% Similarity=0.336 Sum_probs=37.1
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
-|.-..++++++.+++++..+..|-++ ..+|-+++.+| -++...|
T Consensus 26 aPftAvlkfaAEeFkv~~~TsAiiTnd-GvGINP~qtAG--nvflkhg 70 (82)
T cd01766 26 TPFTAVLKFAAEEFKVPAATSAIITND-GIGINPAQTAG--NVFLKHG 70 (82)
T ss_pred CchHHHHHHHHHhcCCCccceeEEecC-ccccChhhccc--ceeeecC
Confidence 466778999999999999999999888 49999999998 3444444
No 331
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]
Probab=40.36 E-value=2.4e+02 Score=24.30 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEE---cCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHhhcCC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAV---GDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVSKYDA 302 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~I---GDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (313)
-|.+..++.++.|+|++.+++-.| |.. ..++.....-| ..+.+.+.... .+..+.+++.+..+
T Consensus 100 IPgiSS~q~a~ARlg~~~~~~~~islHgr~-~~~l~~~~~~~-~~~vil~~~~~------------~P~~IA~~L~~~G~ 165 (210)
T COG2241 100 IPGISSVQLAAARLGWPLQDTEVISLHGRP-VELLRPLLENG-RRLVILTPDDF------------GPAEIAKLLTENGI 165 (210)
T ss_pred ecChhHHHHHHHHhCCChHHeEEEEecCCC-HHHHHHHHhCC-ceEEEeCCCCC------------CHHHHHHHHHhCCC
Confidence 577779999999999999886655 344 47777777455 55555553221 12345566665553
Q ss_pred --CCcEEecCC
Q 021350 303 --YPSYVLPSF 311 (313)
Q Consensus 303 --~p~~~~~~l 311 (313)
.+-+|+-.|
T Consensus 166 ~~~~~~VlE~L 176 (210)
T COG2241 166 GDSRVTVLENL 176 (210)
T ss_pred CCceEEEEccc
Confidence 444554443
No 332
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=39.77 E-value=45 Score=34.06 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 231 ~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
+-..+-++-+ .++.+|||. .||+.|.++|.+ +|+|..-.++...
T Consensus 772 v~~llq~~t~---krvc~IGDG-GNDVsMIq~A~~-GiGI~gkEGkQAS 815 (1051)
T KOG0210|consen 772 VVRLLQKKTG---KRVCAIGDG-GNDVSMIQAADV-GIGIVGKEGKQAS 815 (1051)
T ss_pred HHHHHHHhhC---ceEEEEcCC-Cccchheeeccc-ceeeecccccccc
Confidence 3334444444 889999999 599999999884 4555554444443
No 333
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=39.40 E-value=3.1e+02 Score=25.22 Aligned_cols=95 Identities=17% Similarity=0.324 Sum_probs=57.5
Q ss_pred CCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcEEEE-cCCccccccchhccCCchHHHHHHHhcCceee
Q 021350 145 VEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPMVVA-NPDYVTVEARALRVMPGTLASKFEKLGGEVRW 223 (313)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~i~t-n~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 223 (313)
.++.+.+++.|. ..+.+..+.+.+.++.|++.|.++++- .+.. +.+.+... .+
T Consensus 127 l~~~d~VvlsGS--------lP~g~~~d~y~~li~~~~~~g~~vilD~Sg~~-----------------L~~~L~~~-P~ 180 (310)
T COG1105 127 LESDDIVVLSGS--------LPPGVPPDAYAELIRILRQQGAKVILDTSGEA-----------------LLAALEAK-PW 180 (310)
T ss_pred cccCCEEEEeCC--------CCCCCCHHHHHHHHHHHHhcCCeEEEECChHH-----------------HHHHHccC-Cc
Confidence 466788887774 236677889999999999999998653 2221 11223323 44
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHH----HHHcCCcEEEEcCCCCC
Q 021350 224 MGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKG----ANAAGIQSVFIIGGIHA 276 (313)
Q Consensus 224 ~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~----a~~aG~~~i~V~~G~~~ 276 (313)
+=||+.+-+..+ +|.+.. +. .|+.. ..+.|+..|.|.-|...
T Consensus 181 lIKPN~~EL~~~---~g~~~~-------~~-~d~i~~a~~l~~~g~~~ViVSlG~~G 226 (310)
T COG1105 181 LIKPNREELEAL---FGRELT-------TL-EDVIKAARELLAEGIENVIVSLGADG 226 (310)
T ss_pred EEecCHHHHHHH---hCCCCC-------Ch-HHHHHHHHHHHHCCCCEEEEEecCcc
Confidence 449995555544 444442 22 23332 24568899998876443
No 334
>KOG0384 consensus Chromodomain-helicase DNA-binding protein [Transcription]
Probab=39.13 E-value=1.2e+02 Score=33.23 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=29.3
Q ss_pred HHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccch
Q 021350 53 STLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITS 98 (313)
Q Consensus 53 ~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~ 98 (313)
..|-+|++-|++|.+.|..-|...-+...|...|++-...++-+..
T Consensus 690 KLL~rLk~~GHrVLIFSQMVRmLDIL~eYL~~r~ypfQRLDGsvrg 735 (1373)
T KOG0384|consen 690 KLLPRLKEGGHRVLIFSQMVRMLDILAEYLSLRGYPFQRLDGSVRG 735 (1373)
T ss_pred HHHHHHhcCCceEEEhHHHHHHHHHHHHHHHHcCCcceeccCCcch
Confidence 3455777777777777754455556667777777776665554443
No 335
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=38.99 E-value=56 Score=25.16 Aligned_cols=24 Identities=13% Similarity=0.184 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPD 194 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d 194 (313)
++++.+++..|+++|+++ ++||..
T Consensus 27 ~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 27 YPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCc
Confidence 578889999999999998 788854
No 336
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=38.35 E-value=38 Score=26.38 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcC-CccccccchhccC-Cch---HHHHHHHh-cCceeecCCCCHHHHHHHHHHhC--
Q 021350 170 SLQDLEKILEICASKKIPM-VVANP-DYVTVEARALRVM-PGT---LASKFEKL-GGEVRWMGKPDKIIYKSAMAMVG-- 240 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~-d~~~~~~~~~~~~-~g~---~~~~~~~~-~~~~~~~gKP~~~~~~~~~~~lg-- 240 (313)
.++++.++++.++++|+++ ++||. .......-..... .+. +...++.. ++. .||+|..|..+++++|
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~----~~pkp~~~~~a~~~lg~~ 105 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY----WLPKSPRLVEIALKLNGV 105 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC----CCcHHHHHHHHHHHhcCC
Confidence 4799999999999999998 88887 3322211100111 000 34455542 222 3688999999999999
Q ss_pred CCCCcEEEEcCCchhhHHHHHH
Q 021350 241 VDACDSIAVGDSLHHDIKGANA 262 (313)
Q Consensus 241 v~~~~~v~IGDs~~~Di~~a~~ 262 (313)
++|++|+||||+. .|++..+.
T Consensus 106 ~~p~~~l~igDs~-~n~~~~~~ 126 (128)
T TIGR01681 106 LKPKSILFVDDRP-DNNEEVDY 126 (128)
T ss_pred CCcceEEEECCCH-hHHHHHHh
Confidence 9999999999997 88877654
No 337
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=37.97 E-value=66 Score=28.46 Aligned_cols=77 Identities=18% Similarity=0.160 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-h---cCce---eecCCCCHHHHHHHHHHhCCC
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-L---GGEV---RWMGKPDKIIYKSAMAMVGVD 242 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~---~~~~---~~~gKP~~~~~~~~~~~lgv~ 242 (313)
.++..+.+.+.-++|..+ ++||.+.--.. .+++..+-.. + .... .-..||...-+..+.+ .
T Consensus 124 vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~-------~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~ 192 (274)
T COG2503 124 VPGAVEFLNYVNSNGGKIFYISNRDQENEK-------DGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK----D 192 (274)
T ss_pred CccHHHHHHHHHhcCcEEEEEeccchhccc-------chhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh----c
Confidence 467888899999999887 88997763211 1233333221 1 1111 1345677667777777 4
Q ss_pred CCcEEEEcCCchhhHHH
Q 021350 243 ACDSIAVGDSLHHDIKG 259 (313)
Q Consensus 243 ~~~~v~IGDs~~~Di~~ 259 (313)
-+-++.|||++ .|..-
T Consensus 193 ~~iVm~vGDNl-~DF~d 208 (274)
T COG2503 193 YKIVMLVGDNL-DDFGD 208 (274)
T ss_pred cceeeEecCch-hhhcc
Confidence 56689999998 88643
No 338
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=37.80 E-value=55 Score=26.38 Aligned_cols=61 Identities=15% Similarity=0.123 Sum_probs=34.5
Q ss_pred EeccceeecCCc--cCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHH
Q 021350 35 LDQFGVLHDGKK--PYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGE 100 (313)
Q Consensus 35 fDlDGTL~~~~~--~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~ 100 (313)
=|.|...+++.. ...-+.+.+++|++.|..-.++--.+..+.+-.+.++++|+. .+++++.
T Consensus 62 ~dv~vIgvSsl~g~h~~l~~~lve~lre~G~~~i~v~~GGvip~~d~~~l~~~G~~-----~if~pgt 124 (143)
T COG2185 62 EDVDVIGVSSLDGGHLTLVPGLVEALREAGVEDILVVVGGVIPPGDYQELKEMGVD-----RIFGPGT 124 (143)
T ss_pred cCCCEEEEEeccchHHHHHHHHHHHHHHhCCcceEEeecCccCchhHHHHHHhCcc-----eeeCCCC
Confidence 355555555432 123456677777787776655333344444446777778874 4555543
No 339
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=36.74 E-value=75 Score=28.28 Aligned_cols=51 Identities=24% Similarity=0.302 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHc---CCcEEEEcCCCCCCcc
Q 021350 228 DKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA---GIQSVFIIGGIHATEL 279 (313)
Q Consensus 228 ~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~a---G~~~i~V~~G~~~~~~ 279 (313)
+...+..-+..+|++..+...|||++ .+|.-+-+. ..+.|.++.|.+...|
T Consensus 22 Na~~la~~L~~~G~~v~~~~~VgD~~-~~I~~~l~~a~~r~D~vI~tGGLGPT~D 75 (255)
T COG1058 22 NAAFLADELTELGVDLARITTVGDNP-DRIVEALREASERADVVITTGGLGPTHD 75 (255)
T ss_pred hHHHHHHHHHhcCceEEEEEecCCCH-HHHHHHHHHHHhCCCEEEECCCcCCCcc
Confidence 33456666777899999999999997 888765432 3688888888887765
No 340
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=36.30 E-value=1.3e+02 Score=24.92 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=31.0
Q ss_pred cceeecCCcc-C-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCC
Q 021350 38 FGVLHDGKKP-Y-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLG 86 (313)
Q Consensus 38 DGTL~~~~~~-~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G 86 (313)
.++.+.+.++ + +...+.++.+++.|+.+.+.||.. ..+....+...|
T Consensus 64 ~~i~~sGGEPll~~~l~~li~~~~~~g~~v~i~TNg~--~~~~l~~l~~~g 112 (191)
T TIGR02495 64 DGVVITGGEPTLQAGLPDFLRKVRELGFEVKLDTNGS--NPRVLEELLEEG 112 (191)
T ss_pred CeEEEECCcccCcHhHHHHHHHHHHCCCeEEEEeCCC--CHHHHHHHHhcC
Confidence 3444444433 3 567788999999999998889875 334455555555
No 341
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=36.11 E-value=1.7e+02 Score=26.87 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=28.4
Q ss_pred ccHHHHHHHHHHCCC--cEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 49 PGAISTLEMLATTGA--KMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 49 ~~a~~~l~~l~~~g~--~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++..+.++.+++.+. .+.+.||.... .+.++.|.+.|+.
T Consensus 76 ~dl~~li~~i~~~~~l~~i~itTNG~ll-~~~~~~L~~aGl~ 116 (329)
T PRK13361 76 RGCDQLVARLGKLPGLEELSLTTNGSRL-ARFAAELADAGLK 116 (329)
T ss_pred ccHHHHHHHHHhCCCCceEEEEeChhHH-HHHHHHHHHcCCC
Confidence 677888888887654 57777886543 4577888888876
No 342
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=36.09 E-value=1.3e+02 Score=27.42 Aligned_cols=59 Identities=25% Similarity=0.349 Sum_probs=42.3
Q ss_pred CccEEEEecc-----------ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHHHhCCC
Q 021350 29 RFKAWLLDQF-----------GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA-STTIDKLKSLGF 87 (313)
Q Consensus 29 ~~k~iifDlD-----------GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~~~l~~~G~ 87 (313)
.+++|.+|.| |...=..+.+|.-.+.++.|+++|+++++..+..... ....+.+.+.|.
T Consensus 39 P~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k~~~~v~P~v~~~~~~y~e~~~~g~ 109 (317)
T cd06598 39 PLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPAGMIADLAKKGVKTIVITEPFVLKNSKNWGEAVKAGA 109 (317)
T ss_pred CceEEEEechhhcCcccCCceeeeEeccccCCCHHHHHHHHHHcCCcEEEEEcCcccCCchhHHHHHhCCC
Confidence 5789999975 2332245678999999999999999999988755332 344556666665
No 343
>COG1834 N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism]
Probab=36.09 E-value=71 Score=28.62 Aligned_cols=85 Identities=15% Similarity=0.269 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhCCCcEE-EE----cCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCC-----
Q 021350 173 DLEKILEICASKKIPMV-VA----NPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVD----- 242 (313)
Q Consensus 173 ~~~~~l~~l~~~g~~~i-~t----n~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~----- 242 (313)
.-+...+.+.++|+.+. .. -+|.++.....++.+.+.+...+.+ ..-+.....++..++++|++
T Consensus 39 Qh~~lve~l~~~gv~V~ll~~~~~~Pd~VFt~D~~~v~~~~avl~r~~~------p~R~gE~~~~~~~~~~lgi~i~~~~ 112 (267)
T COG1834 39 QHEALVEALEKNGVEVHLLPPIEGLPDQVFTRDPGLVTGEGAVLARMGA------PERRGEEEAIKETLESLGIPIYPRV 112 (267)
T ss_pred HHHHHHHHHHHCCCEEEEcCcccCCCcceEeccceeEecccEEEeccCC------hhhccCHHHHHHHHHHcCCcccccc
Confidence 33444455567888773 22 1445555444444433332221111 11234445778888887764
Q ss_pred --------------CCcEEEEcCCchhhHHHHHHc
Q 021350 243 --------------ACDSIAVGDSLHHDIKGANAA 263 (313)
Q Consensus 243 --------------~~~~v~IGDs~~~Di~~a~~a 263 (313)
-.++++||.+.++|++++...
T Consensus 113 ~~~~~eG~GD~l~~~~~~v~iG~s~RTn~egi~~l 147 (267)
T COG1834 113 EAGVFEGAGDVLMDGGDTVYIGYSFRTNLEGIEQL 147 (267)
T ss_pred cCCCccccccEEEeCCcEEEEEeccccchHHHHHH
Confidence 167888899999999888764
No 344
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=35.98 E-value=3.2e+02 Score=24.37 Aligned_cols=19 Identities=26% Similarity=0.368 Sum_probs=15.7
Q ss_pred hhHHHHHHcCCcEEEEcCC
Q 021350 255 HDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 255 ~Di~~a~~aG~~~i~V~~G 273 (313)
.=+++|.++|+..|.|.+-
T Consensus 213 ~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 213 EKIEAARELGIPVIMIERP 231 (257)
T ss_pred HHHHHHHHcCCcEEEEecC
Confidence 3488899999999999875
No 345
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=35.49 E-value=3.2e+02 Score=24.23 Aligned_cols=44 Identities=11% Similarity=0.189 Sum_probs=23.4
Q ss_pred ccchHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEe
Q 021350 18 LNGLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS 69 (313)
Q Consensus 18 ~~~~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~T 69 (313)
+.++.+-+....|+.+++..++.. ...+.++.|.+++..=++++
T Consensus 20 i~gIe~~a~~~Gy~l~l~~t~~~~--------~~e~~i~~l~~~~vDGiI~~ 63 (279)
T PF00532_consen 20 IRGIEQEAREHGYQLLLCNTGDDE--------EKEEYIELLLQRRVDGIILA 63 (279)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTTH--------HHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHHcCCEEEEecCCCch--------HHHHHHHHHHhcCCCEEEEe
Confidence 445555555456777776654322 11155555666665555554
No 346
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=35.47 E-value=3.6e+02 Score=24.93 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCC--chhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDS--LHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs--~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
-.+|+.++...+...+ -|++|=. -..|...|-+.|++.+++.||..+..+
T Consensus 235 v~~p~~i~~~~e~~~v----pVivdAGIg~~sda~~AmelGadgVL~nSaIa~a~d 286 (326)
T PRK11840 235 IQNPYTIRLIVEGATV----PVLVDAGVGTASDAAVAMELGCDGVLMNTAIAEAKN 286 (326)
T ss_pred CCCHHHHHHHHHcCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEcceeccCCC
Confidence 3378899999998433 3444432 247999999999999999999875554
No 347
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=35.12 E-value=3.5e+02 Score=26.99 Aligned_cols=91 Identities=15% Similarity=0.112 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEE
Q 021350 169 MSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSI 247 (313)
Q Consensus 169 ~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v 247 (313)
++.-++-.++..+++.+-++ +++-+.... .+..+-+.++.+.....--+++-....++.+. ...--+
T Consensus 91 ~s~~Dil~al~~a~~~~~~iavv~~~~~~~-----------~~~~~~~~l~~~i~~~~~~~~~e~~~~v~~lk-~~G~~~ 158 (538)
T PRK15424 91 PSGFDVMQALARARKLTSSIGVVTYQETIP-----------ALVAFQKTFNLRIEQRSYVTEEDARGQINELK-ANGIEA 158 (538)
T ss_pred CCHhHHHHHHHHHHhcCCcEEEEecCcccH-----------HHHHHHHHhCCceEEEEecCHHHHHHHHHHHH-HCCCCE
Confidence 34445666666666666666 555433311 11111122343332222222223333333331 112246
Q ss_pred EEcCCchhhHHHHHHcCCcEEEEcCC
Q 021350 248 AVGDSLHHDIKGANAAGIQSVFIIGG 273 (313)
Q Consensus 248 ~IGDs~~~Di~~a~~aG~~~i~V~~G 273 (313)
+|||.+ . ...|+++|+.++++.++
T Consensus 159 vvG~~~-~-~~~A~~~g~~g~~~~s~ 182 (538)
T PRK15424 159 VVGAGL-I-TDLAEEAGMTGIFIYSA 182 (538)
T ss_pred EEcCch-H-HHHHHHhCCceEEecCH
Confidence 789986 5 78999999999999864
No 348
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
Probab=34.68 E-value=77 Score=23.01 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=34.9
Q ss_pred ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.+.+++|+-++=.=......--.+..+.+++.|+.+.+.. ....+.+.+...|+.
T Consensus 41 ~~~lilD~~~v~~iDss~~~~L~~~~~~~~~~~~~~~l~~----~~~~~~~~l~~~g~~ 95 (107)
T cd07042 41 LKVVILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAG----LNPQVRELLERAGLL 95 (107)
T ss_pred ceEEEEECCCCchhhHHHHHHHHHHHHHHHHCCCEEEEec----CCHHHHHHHHHcCcH
Confidence 3788899998633222222223455666778888887754 234677778888875
No 349
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=34.56 E-value=4.2e+02 Score=26.17 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=39.0
Q ss_pred CCCCCcEEEEcCCchhhHHH---H-HHcCCcEEEEcCCCCCCcc-c-------ccCCCCccchhhHHHHHhhcCCCCcEE
Q 021350 240 GVDACDSIAVGDSLHHDIKG---A-NAAGIQSVFIIGGIHATEL-G-------LDSYGEVADLSSVQTLVSKYDAYPSYV 307 (313)
Q Consensus 240 gv~~~~~v~IGDs~~~Di~~---a-~~aG~~~i~V~~G~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~ 307 (313)
.+.-.++.++||.- .-+.. + +.+|+..+.+.|-.....+ + .+......|...+++.+.+ ..|+.+
T Consensus 290 ~l~Gkrv~I~gd~~-~a~~l~~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~~~~~~i~~D~~el~~~i~~--~~Pdli 366 (519)
T PRK02910 290 YLTGKRVFVFGDAT-HAVAAARILSDELGFEVVGAGTYLREDARWVRAAAKEYGDEALITDDYLEVEDAIAE--AAPELV 366 (519)
T ss_pred hhcCCEEEEEcCcH-HHHHHHHHHHHhcCCeEEEEecCCcchhHHHHHHHHhcCCCeEEecCHHHHHHHHHh--cCCCEE
Confidence 34567899999984 55555 2 3689998877652221110 0 0011112355667777765 578888
Q ss_pred ecC
Q 021350 308 LPS 310 (313)
Q Consensus 308 ~~~ 310 (313)
+.+
T Consensus 367 iG~ 369 (519)
T PRK02910 367 LGT 369 (519)
T ss_pred EEc
Confidence 764
No 350
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=34.49 E-value=32 Score=28.30 Aligned_cols=25 Identities=12% Similarity=0.113 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
++++.++|..|+++|+++ ++||...
T Consensus 28 ~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 28 IDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 478999999999999999 8999654
No 351
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=34.47 E-value=2.2e+02 Score=25.13 Aligned_cols=93 Identities=17% Similarity=0.145 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhCCCcEE-EEcCCccccccchhccCCchHHHHHHHhcCc-------e--eecCCCCHHHHHHHHHHhCC
Q 021350 172 QDLEKILEICASKKIPMV-VANPDYVTVEARALRVMPGTLASKFEKLGGE-------V--RWMGKPDKIIYKSAMAMVGV 241 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~i-~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~-------~--~~~gKP~~~~~~~~~~~lgv 241 (313)
-+.-++.+.|.+.|+.++ .+++|.+. .+.++..|.. + ...|--++..++.+.++.++
T Consensus 110 ~etl~Aae~Lv~eGF~VlPY~~~D~v~-------------akrL~d~GcaavMPlgsPIGSg~Gi~n~~~l~~i~~~~~v 176 (247)
T PF05690_consen 110 IETLKAAEILVKEGFVVLPYCTDDPVL-------------AKRLEDAGCAAVMPLGSPIGSGRGIQNPYNLRIIIERADV 176 (247)
T ss_dssp HHHHHHHHHHHHTT-EEEEEE-S-HHH-------------HHHHHHTT-SEBEEBSSSTTT---SSTHHHHHHHHHHGSS
T ss_pred hHHHHHHHHHHHCCCEEeecCCCCHHH-------------HHHHHHCCCCEEEecccccccCcCCCCHHHHHHHHHhcCC
Confidence 456666778888999873 55666632 2334444442 1 34566788899999999977
Q ss_pred CCCcEEEEcCCchhhHHHHHHcCCcEEEEcCCCCCCcc
Q 021350 242 DACDSIAVGDSLHHDIKGANAAGIQSVFIIGGIHATEL 279 (313)
Q Consensus 242 ~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~ 279 (313)
+. +|=-|=.-.+|..-|-++|++.|+|.|......+
T Consensus 177 Pv--IvDAGiG~pSdaa~AMElG~daVLvNTAiA~A~d 212 (247)
T PF05690_consen 177 PV--IVDAGIGTPSDAAQAMELGADAVLVNTAIAKAKD 212 (247)
T ss_dssp SB--EEES---SHHHHHHHHHTT-SEEEESHHHHTSSS
T ss_pred cE--EEeCCCCCHHHHHHHHHcCCceeehhhHHhccCC
Confidence 53 2222223348999999999999999997655543
No 352
>PRK06769 hypothetical protein; Validated
Probab=34.04 E-value=32 Score=28.34 Aligned_cols=25 Identities=12% Similarity=0.052 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
++++.++|+.|+++|+++ ++||...
T Consensus 30 ~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 30 FPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCch
Confidence 578999999999999998 8898653
No 353
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=33.65 E-value=1.4e+02 Score=27.37 Aligned_cols=73 Identities=8% Similarity=0.019 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCC-cEEE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDAC-DSIA 248 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~-~~v~ 248 (313)
-+++.++|..|+++|.++ ++||+.. + .....++.+|++.- +++.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~R---------------------------------e-~v~~~Le~lgL~~yFDvII 195 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNR---------------------------------E-HVVHSLKETKLEGYFDIII 195 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCCh---------------------------------H-HHHHHHHHcCCCccccEEE
Confidence 478999999999999998 8887433 1 34667777877532 4677
Q ss_pred EcCCchhhHHHHHH----cCCcEEEEcCCCCCCcc
Q 021350 249 VGDSLHHDIKGANA----AGIQSVFIIGGIHATEL 279 (313)
Q Consensus 249 IGDs~~~Di~~a~~----aG~~~i~V~~G~~~~~~ 279 (313)
.+|+....- ..+ .-...+++.+.++.+-+
T Consensus 196 ~~g~i~~k~--~~~~~~d~~~~~~~~~~~f~~d~~ 228 (303)
T PHA03398 196 CGGRKAGEY--SRRVIVDNKYKMVFVKKPFYLDVT 228 (303)
T ss_pred ECCCccccc--ccceeecccceeEEecCceeEeCC
Confidence 777752221 211 12467777777666554
No 354
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=33.61 E-value=1.5e+02 Score=31.67 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=35.5
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCc
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS 90 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~ 90 (313)
|-++=++++=+.+...|+.|++.+++.+++| |-..-......++.|+-.+
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcT--GDNllTaisVakeCgmi~p 747 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCT--GDNLLTAISVAKECGMIEP 747 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEc--CCchheeeehhhcccccCC
Confidence 6566678888899999999999999999999 4333333333455566433
No 355
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=32.76 E-value=1.6e+02 Score=27.73 Aligned_cols=75 Identities=20% Similarity=0.195 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcC
Q 021350 172 QDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGD 251 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGD 251 (313)
+.++.+|..++++|+++|+...... + .--.+..+.+++.+|++..=.++-||
T Consensus 58 ~~L~~~L~~~~~~gIkvI~NaGg~n-p---------------------------~~~a~~v~eia~e~Gl~lkvA~V~gD 109 (362)
T PF07287_consen 58 RDLRPLLPAAAEKGIKVITNAGGLN-P---------------------------AGCADIVREIARELGLSLKVAVVYGD 109 (362)
T ss_pred HHHHHHHHHHHhCCCCEEEeCCCCC-H---------------------------HHHHHHHHHHHHhcCCCeeEEEEECc
Confidence 4889999999999999866432220 1 01223677788889999777777799
Q ss_pred CchhhHHHHHHcCCcEEEEcCCC
Q 021350 252 SLHHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 252 s~~~Di~~a~~aG~~~i~V~~G~ 274 (313)
.+..-+.-..+.|...-...+|.
T Consensus 110 d~~~~v~~~~~~g~~~~~l~~~~ 132 (362)
T PF07287_consen 110 DLKDEVKELLAEGETIRPLDTGP 132 (362)
T ss_pred cchHhHHHHHhCCCCCccCCCCC
Confidence 98555556666675544555554
No 356
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=32.47 E-value=36 Score=27.09 Aligned_cols=25 Identities=16% Similarity=-0.000 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
++++.++++.|+++|+++ ++||.+.
T Consensus 29 ~~g~~~~l~~Lk~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 29 RPGAVPALLTLRAAGYTVVVVTNQSG 54 (147)
T ss_pred cCChHHHHHHHHHCCCEEEEEeCCCc
Confidence 578899999999999998 8899654
No 357
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=32.39 E-value=30 Score=23.60 Aligned_cols=25 Identities=32% Similarity=0.449 Sum_probs=14.3
Q ss_pred HHHHHHHhCCCCCcEEEEcCCchhhHHHHH
Q 021350 232 YKSAMAMVGVDACDSIAVGDSLHHDIKGAN 261 (313)
Q Consensus 232 ~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~ 261 (313)
...+++++|+ .+++||+. .|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~-~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRL-WDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HH-HHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChH-HHHHHHH
Confidence 3456777775 89999996 9999875
No 358
>PF07075 DUF1343: Protein of unknown function (DUF1343); InterPro: IPR008302 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.13 E-value=46 Score=31.32 Aligned_cols=48 Identities=15% Similarity=0.058 Sum_probs=38.5
Q ss_pred chHHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEe
Q 021350 20 GLRHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS 69 (313)
Q Consensus 20 ~~~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~T 69 (313)
.-.++++ .+|+++||+.++=...-+.+--...++++..+.|++++++=
T Consensus 71 Pt~~mL~--~vDvlvfDiQDvG~R~YTYi~Tl~~~MeAaa~~g~~vvVLD 118 (365)
T PF07075_consen 71 PTPEMLK--GVDVLVFDIQDVGVRFYTYISTLYYVMEAAAENGKPVVVLD 118 (365)
T ss_pred CCHHHHh--CCCEEEEeCccCCchHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4467778 99999999999866655555556678888899999999884
No 359
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=31.29 E-value=60 Score=27.05 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=30.3
Q ss_pred hcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEe
Q 021350 27 TRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS 69 (313)
Q Consensus 27 ~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~T 69 (313)
||+.+.++||=----+ ..++.......|..|.+-|+..+++|
T Consensus 157 mmkpqvllfdeptaal-dpeitaqvv~iikel~~tgitqvivt 198 (242)
T COG4161 157 MMEPQVLLFDEPTAAL-DPEITAQIVSIIKELAETGITQVIVT 198 (242)
T ss_pred hcCCcEEeecCccccc-CHHHHHHHHHHHHHHHhcCceEEEEE
Confidence 6699999999433222 23333456778889999999999988
No 360
>PHA02597 30.2 hypothetical protein; Provisional
Probab=30.39 E-value=87 Score=26.00 Aligned_cols=25 Identities=16% Similarity=0.311 Sum_probs=15.1
Q ss_pred cCccHHHHHHHHHHCCCcEEEEeCCC
Q 021350 47 PYPGAISTLEMLATTGAKMVVISNSS 72 (313)
Q Consensus 47 ~~~~a~~~l~~l~~~g~~~~~~Tn~~ 72 (313)
++||+.+.|++|++.+ +..++||.+
T Consensus 75 ~~pG~~e~L~~L~~~~-~~~i~Tn~~ 99 (197)
T PHA02597 75 AYDDALDVINKLKEDY-DFVAVTALG 99 (197)
T ss_pred CCCCHHHHHHHHHhcC-CEEEEeCCc
Confidence 4666667777776653 455556544
No 361
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=30.21 E-value=1.3e+02 Score=26.87 Aligned_cols=62 Identities=19% Similarity=0.318 Sum_probs=49.3
Q ss_pred ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCccccc
Q 021350 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAG 94 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ 94 (313)
.+.+++=+.|.....+.+++...+.+..|+..|++.+++-..+ .++-+.|+++|++..+..+
T Consensus 2 ~k~~VIK~GG~~~~~~~l~~~~~~di~lL~~~G~~~VvVHGgg---p~I~~~l~~~gie~~f~~g 63 (265)
T COG0548 2 GKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHGGG---PQIDEMLAKLGIEPEFVKG 63 (265)
T ss_pred CceEEEEECceeecCchHHHHHHHHHHHHHHCCCcEEEEeCCc---hHHHHHHHHcCCCCeeeCC
Confidence 4688899999999998888888999999999999888877443 3555668888998766333
No 362
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=30.17 E-value=1.1e+02 Score=27.60 Aligned_cols=55 Identities=13% Similarity=0.120 Sum_probs=39.1
Q ss_pred ccchHHhhh-----hcCccEEEEecc-c-------------eeecCCccCccHHHHHHHHHHCCCcEEEEeCCC
Q 021350 18 LNGLRHIAE-----TRRFKAWLLDQF-G-------------VLHDGKKPYPGAISTLEMLATTGAKMVVISNSS 72 (313)
Q Consensus 18 ~~~~~~~~~-----~~~~k~iifDlD-G-------------TL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~ 72 (313)
.+.+.++++ -..+++|.+|+| - ...=..+.+|+-.+.++.|.++|.++++..+..
T Consensus 24 ~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~v~~v~P~ 97 (292)
T cd06595 24 DEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLLQDLHDRGLKVTLNLHPA 97 (292)
T ss_pred HHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHHHHHHHHCCCEEEEEeCCC
Confidence 345555554 135789999986 1 122234678999999999999999999887643
No 363
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=29.65 E-value=1.1e+02 Score=24.15 Aligned_cols=22 Identities=14% Similarity=0.218 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEc
Q 021350 171 LQDLEKILEICASKKIPM-VVAN 192 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn 192 (313)
|++.+.+|..|++.|+.+ ++|+
T Consensus 46 Y~Di~rIL~dLk~~GVtl~~ASR 68 (144)
T KOG4549|consen 46 YDDIRRILVDLKKLGVTLIHASR 68 (144)
T ss_pred ccchhHHHHHHHhcCcEEEEecC
Confidence 678899999999999999 5555
No 364
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=29.59 E-value=34 Score=33.55 Aligned_cols=20 Identities=15% Similarity=0.335 Sum_probs=16.6
Q ss_pred ccEEEEeccceeecCCccCc
Q 021350 30 FKAWLLDQFGVLHDGKKPYP 49 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~ 49 (313)
-+++++|+||||+.+...+|
T Consensus 50 ~~t~v~d~~g~Ll~s~s~Fp 69 (525)
T PLN02588 50 NHTLIFNVEGALLKSNSLFP 69 (525)
T ss_pred cceEEEecccceeccCCCCc
Confidence 46899999999998776555
No 365
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
Probab=29.49 E-value=71 Score=27.27 Aligned_cols=70 Identities=14% Similarity=0.143 Sum_probs=50.9
Q ss_pred eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCch-hhHHHHHH-cCCcEEEEcCCCCCCcccccCCCCccchhhHHHHHh
Q 021350 221 VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLH-HDIKGANA-AGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLVS 298 (313)
Q Consensus 221 ~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~-~Di~~a~~-aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (313)
+.+.||-. .++..++.|.=..+=.|+-||-+. +|-+...+ .|.+.+.|.||..=.+ +++-....++++..
T Consensus 21 p~GSGKTa--Lie~~~~~L~~~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~------da~m~~~ai~~l~~ 92 (202)
T COG0378 21 PPGSGKTA--LIEKTLRALKDEYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHL------DASMNLEAIEELVL 92 (202)
T ss_pred CCCcCHHH--HHHHHHHHHHhhCCeEEEeceeechhhHHHHHhCCCCeeEEeccCCccCC------cHHHHHHHHHHHhh
Confidence 44556766 889999988766777888999875 68888889 9999999999955432 23334445555543
No 366
>COG0602 NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=29.31 E-value=63 Score=27.80 Aligned_cols=58 Identities=22% Similarity=0.290 Sum_probs=44.0
Q ss_pred ccccchHHhhhhcCccEEEEeccceeecCCcc-C-ccHHHHHHHHHHCCCcEEEEeCCCCCc
Q 021350 16 QTLNGLRHIAETRRFKAWLLDQFGVLHDGKKP-Y-PGAISTLEMLATTGAKMVVISNSSRRA 75 (313)
Q Consensus 16 ~~~~~~~~~~~~~~~k~iifDlDGTL~~~~~~-~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~ 75 (313)
.+...+.++++ .++......-|+.+.+.++ + ++..+.++.+++.|+++.+-||.+...
T Consensus 53 ~~~~~~~~I~~--~i~~~~~~~~~V~lTGGEP~~~~~l~~Ll~~l~~~g~~~~lETngti~~ 112 (212)
T COG0602 53 GTPMSADEILA--DIKSLGYKARGVSLTGGEPLLQPNLLELLELLKRLGFRIALETNGTIPV 112 (212)
T ss_pred CCccCHHHHHH--HHHhcCCCcceEEEeCCcCCCcccHHHHHHHHHhCCceEEecCCCCccc
Confidence 45667778887 7777656666887776655 3 478999999999999999999877443
No 367
>PRK11660 putative transporter; Provisional
Probab=29.26 E-value=1.2e+02 Score=30.18 Aligned_cols=72 Identities=10% Similarity=-0.039 Sum_probs=44.6
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCc-ccccccchHHHHHHH
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPS-LFAGAITSGELTHQY 105 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~-~~~~ii~~~~~~~~~ 105 (313)
..+.+++|+.++=.-+......-.+..+++++ |.++.++. ....+.+.+++.|+... ....++...+.+.+.
T Consensus 490 ~~~~VVlD~~~V~~iDssg~~~L~~l~~~l~~-g~~l~l~~----l~~~v~~~l~~~gl~~~~~~~~if~~~~~Al~~ 562 (568)
T PRK11660 490 GKRIVVLQWDAVPVLDAGGLDAFQRFVKRLPE-GCELRICN----LQFQPLRTLARAGIQPIPGRLAFYPTLREALAD 562 (568)
T ss_pred CCCEEEEEcCCCCcccHHHHHHHHHHHHHHHC-CCEEEEec----CChHHHHHHHHCCChhhcCcccccCCHHHHHHH
Confidence 67899999999744333333444556667778 88887754 34467888888888531 113455544444333
No 368
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=28.87 E-value=62 Score=26.11 Aligned_cols=35 Identities=23% Similarity=0.204 Sum_probs=24.9
Q ss_pred EEeccceeecCC-ccCccHHHHHHHHHHCCCcEEEE
Q 021350 34 LLDQFGVLHDGK-KPYPGAISTLEMLATTGAKMVVI 68 (313)
Q Consensus 34 ifDlDGTL~~~~-~~~~~a~~~l~~l~~~g~~~~~~ 68 (313)
+-|-||||+-.. .+.-|+.-+.+..++.++|+.++
T Consensus 61 V~DsDgTlI~~~g~l~GGt~lT~~~a~~~~KP~l~i 96 (145)
T PF12694_consen 61 VRDSDGTLIFTRGELTGGTALTVEFARKHGKPCLHI 96 (145)
T ss_dssp HHTSSEEEEEESSS--HHHHHHHHHHHHTT--EEEE
T ss_pred hhhcCeEEEEecCCCCcHHHHHHHHHHHhCCCEEEE
Confidence 458899987755 44457888888899999999877
No 369
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=28.54 E-value=64 Score=25.66 Aligned_cols=31 Identities=26% Similarity=0.212 Sum_probs=21.7
Q ss_pred cEEEEcCCchhhHHHHHHcCCcEEEEcCCCC
Q 021350 245 DSIAVGDSLHHDIKGANAAGIQSVFIIGGIH 275 (313)
Q Consensus 245 ~~v~IGDs~~~Di~~a~~aG~~~i~V~~G~~ 275 (313)
++++||||+-.+........++.+.|..+.+
T Consensus 1 ~v~~~GDSv~~~~~~~~~~~~p~~~i~a~~g 31 (150)
T cd01840 1 DITAIGDSVMLDSSPALQEIFPNIQIDAKVG 31 (150)
T ss_pred CeeEEeehHHHchHHHHHHHCCCCEEEeeec
Confidence 4688999986666666666677777765544
No 370
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=28.53 E-value=29 Score=23.64 Aligned_cols=29 Identities=10% Similarity=0.014 Sum_probs=21.7
Q ss_pred cEEEEeccceeecCCccCccHHHHHHHHH
Q 021350 31 KAWLLDQFGVLHDGKKPYPGAISTLEMLA 59 (313)
Q Consensus 31 k~iifDlDGTL~~~~~~~~~a~~~l~~l~ 59 (313)
..|+||=|+.-.+|.-++|....+.+.++
T Consensus 25 s~iiFDNded~tdSa~llp~ie~a~~~~r 53 (65)
T PF06117_consen 25 SDIIFDNDEDKTDSAALLPAIEQARADVR 53 (65)
T ss_pred CCeeecCCCcccchHHHHHHHHHHHHHHH
Confidence 56999999999999888776555544433
No 371
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=28.12 E-value=50 Score=31.32 Aligned_cols=38 Identities=13% Similarity=-0.012 Sum_probs=0.0
Q ss_pred hcCccEEEEeccceeecCCccCccHHH---HHHHHHHCCCc
Q 021350 27 TRRFKAWLLDQFGVLHDGKKPYPGAIS---TLEMLATTGAK 64 (313)
Q Consensus 27 ~~~~k~iifDlDGTL~~~~~~~~~a~~---~l~~l~~~g~~ 64 (313)
|.+|.+|-||||+||..-+..-..... +...+...|.+
T Consensus 24 l~~i~~~GfdmDyTL~~Y~~~~~esLay~~~~~~l~~~Gyp 64 (424)
T KOG2469|consen 24 LENIGIVGFDMDYTLARYNLPEMESLAYDLAQFLLKDKGYP 64 (424)
T ss_pred hhcCcEEeeccccchhhhcccchHHHHHHHHHHHHHhcCCh
No 372
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=27.91 E-value=4.7e+02 Score=23.92 Aligned_cols=103 Identities=16% Similarity=0.022 Sum_probs=60.8
Q ss_pred CCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHHhcCc---e
Q 021350 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEKLGGE---V 221 (313)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~---~ 221 (313)
-+.|.+++.|. ...++..++++.+++.|..+ ++||.+.... ..+...+..+|-. .
T Consensus 27 fDcDGVlW~g~------------~~ipGs~e~l~~L~~~gK~i~fvTNNStksr---------~~y~kK~~~lG~~~v~e 85 (306)
T KOG2882|consen 27 FDCDGVLWLGE------------KPIPGSPEALNLLKSLGKQIIFVTNNSTKSR---------EQYMKKFAKLGFNSVKE 85 (306)
T ss_pred EcCCcceeecC------------CCCCChHHHHHHHHHcCCcEEEEeCCCcchH---------HHHHHHHHHhCccccCc
Confidence 35566776543 23478899999999999877 7888655221 1234555554322 2
Q ss_pred eecCCCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 222 RWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 222 ~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
..+--|.-.+..++-++. ...+.+.++|=.-- -+-.+++|+.+..-..
T Consensus 86 ~~i~ssa~~~a~ylk~~~-~~~k~Vyvig~~gi--~~eL~~aG~~~~g~~~ 133 (306)
T KOG2882|consen 86 ENIFSSAYAIADYLKKRK-PFGKKVYVIGEEGI--REELDEAGFEYFGGGP 133 (306)
T ss_pred ccccChHHHHHHHHHHhC-cCCCeEEEecchhh--hHHHHHcCceeecCCC
Confidence 222234433444444444 56688999987742 3667888966555444
No 373
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=27.57 E-value=60 Score=30.28 Aligned_cols=24 Identities=29% Similarity=0.418 Sum_probs=20.6
Q ss_pred cHHHHHHHHHHCCCcEEEEeCCCC
Q 021350 50 GAISTLEMLATTGAKMVVISNSSR 73 (313)
Q Consensus 50 ~a~~~l~~l~~~g~~~~~~Tn~~~ 73 (313)
....++++|+..|++.+++||++-
T Consensus 244 ql~~fl~kL~~~GKklFLiTNSPy 267 (510)
T KOG2470|consen 244 QLLAFLRKLKDHGKKLFLITNSPY 267 (510)
T ss_pred HHHHHHHHHHHhcCcEEEEeCCch
Confidence 456788899999999999999873
No 374
>PF14528 LAGLIDADG_3: LAGLIDADG-like domain; PDB: 2CW7_A 2CW8_A 2VS8_F 2VS7_G 1B24_A 1DQ3_A 2DCH_X.
Probab=27.55 E-value=14 Score=25.87 Aligned_cols=42 Identities=19% Similarity=0.297 Sum_probs=24.4
Q ss_pred EEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCC
Q 021350 34 LLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDP 89 (313)
Q Consensus 34 ifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~ 89 (313)
+||-||++.....- ...+.+.|++....+++...|.++|+..
T Consensus 7 lfd~DG~v~~~~~~--------------~~~i~~~~~s~~ll~~v~~lL~~lGi~~ 48 (77)
T PF14528_consen 7 LFDGDGSVSKNRRK--------------SVRISISSKSKELLEDVQKLLLRLGIKA 48 (77)
T ss_dssp HHHHHEEEECCSEC--------------EEEEEEEES-HHHHHHHHHHHHHTT--E
T ss_pred HhcCCccEECCCCc--------------EEEEEEEECCHHHHHHHHHHHHHCCCee
Confidence 47889988753321 1234444544444578888889999974
No 375
>COG3876 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.30 E-value=74 Score=29.23 Aligned_cols=113 Identities=15% Similarity=0.214 Sum_probs=68.7
Q ss_pred HHhhhhcCccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEe--C--CCCCchH-HH-HH-HHhCCCCCccccc
Q 021350 22 RHIAETRRFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVIS--N--SSRRAST-TI-DK-LKSLGFDPSLFAG 94 (313)
Q Consensus 22 ~~~~~~~~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~T--n--~~~~~~~-~~-~~-l~~~G~~~~~~~~ 94 (313)
.|++. .+|.++||+.++=+.+-..+--...+++..++.|++++++- | +++..+. +. .. -.-.|+..-....
T Consensus 118 ~emle--~~DV~vfDiQDvG~R~Ytyiytm~yameAs~e~~k~fiVLDRPNP~gG~~VeGplld~~y~sfvg~ypIP~~y 195 (409)
T COG3876 118 KEMLE--DCDVFVFDIQDVGVRSYTYIYTMAYAMEASAENGKEFIVLDRPNPMGGNIVEGPLLDPRYKSFVGLYPIPYCY 195 (409)
T ss_pred HHHHh--cCCEEEEechhccceehhHHHHHHHHHHHHHHcCCceEEeCCCCCCCCccccCCCCCccccccccccCccccc
Confidence 56777 89999999999888877777777888889999999998884 4 2222221 10 00 1123443222266
Q ss_pred ccchHHHHHHHHHhcCchhhhhcCCeEEEeecCc-ccchhhccCCcccc
Q 021350 95 AITSGELTHQYLLRRDDAWFAALGRSCIHMTWSD-RGAISLEGLGLKVV 142 (313)
Q Consensus 95 ii~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~-~~~~~l~~~g~~~~ 142 (313)
-+++++.+.-+-++.. .++++-++.... .....+.+.|+..+
T Consensus 196 GmT~GElAllfn~efa------i~a~vtVVpmkgWkR~m~f~dtgL~wv 238 (409)
T COG3876 196 GMTPGELALLFNKEFA------INADVTVVPMKGWKRSMDFDDTGLIWV 238 (409)
T ss_pred CCCHHHHHHHhhhhcC------CCCceEEEecccccccccccccCceec
Confidence 7778876665544443 356655443211 11235777776643
No 376
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=26.97 E-value=92 Score=24.19 Aligned_cols=16 Identities=13% Similarity=0.507 Sum_probs=12.0
Q ss_pred CccEEEEeccceeecCC
Q 021350 29 RFKAWLLDQFGVLHDGK 45 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~ 45 (313)
+++++|| +||..|++.
T Consensus 55 ~~klaIf-VDGcfWHgh 70 (117)
T TIGR00632 55 EYRCVIF-IHGCFWHGH 70 (117)
T ss_pred CCCEEEE-EcccccccC
Confidence 5666666 999998853
No 377
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=26.90 E-value=1.7e+02 Score=26.52 Aligned_cols=44 Identities=11% Similarity=0.151 Sum_probs=34.7
Q ss_pred CccEEEEecc-----ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCC
Q 021350 29 RFKAWLLDQF-----GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSS 72 (313)
Q Consensus 29 ~~k~iifDlD-----GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~ 72 (313)
.+++|.+|.+ |...-..+.+|+-.+.+++|++.|+++++..+..
T Consensus 45 P~d~i~iD~~w~~~~g~f~~d~~~FPdp~~mi~~l~~~G~k~~l~i~P~ 93 (303)
T cd06592 45 PNGQIEIDDNWETCYGDFDFDPTKFPDPKGMIDQLHDLGFRVTLWVHPF 93 (303)
T ss_pred CCCeEEeCCCccccCCccccChhhCCCHHHHHHHHHHCCCeEEEEECCe
Confidence 4789999975 5544345678999999999999999998877644
No 378
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=26.63 E-value=1.8e+02 Score=26.84 Aligned_cols=71 Identities=20% Similarity=0.271 Sum_probs=45.8
Q ss_pred cccchHHhhhh-----cCccEEEEecc-----ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCc---hHHHHHHH
Q 021350 17 TLNGLRHIAET-----RRFKAWLLDQF-----GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA---STTIDKLK 83 (313)
Q Consensus 17 ~~~~~~~~~~~-----~~~k~iifDlD-----GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~---~~~~~~l~ 83 (313)
..+.+.++++. ..+++|.+|+| +...=..+.+|+..+.++.|++.|+++++..+..... ....+.+.
T Consensus 22 ~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~k~~~~~~P~v~~~~~~~~y~e~~ 101 (339)
T cd06603 22 DQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFPDPEKMQEKLASKGRKLVTIVDPHIKRDDGYYVYKEAK 101 (339)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCceEeCcccCCCHHHHHHHHHHCCCEEEEEecCceecCCCCHHHHHHH
Confidence 34455555541 25688999986 2221134578999999999999999998887644332 23445556
Q ss_pred hCCC
Q 021350 84 SLGF 87 (313)
Q Consensus 84 ~~G~ 87 (313)
+.|.
T Consensus 102 ~~g~ 105 (339)
T cd06603 102 DKGY 105 (339)
T ss_pred HCCe
Confidence 5555
No 379
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=26.55 E-value=51 Score=31.95 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=23.4
Q ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCCc-hHHHHHH
Q 021350 49 PGAISTLEMLATTGAKMVVISNSSRRA-STTIDKL 82 (313)
Q Consensus 49 ~~a~~~l~~l~~~g~~~~~~Tn~~~~~-~~~~~~l 82 (313)
|.....|++|++.|++++++||+.... ....+.+
T Consensus 186 ~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl 220 (448)
T PF05761_consen 186 PKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYL 220 (448)
T ss_dssp CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHH
T ss_pred chHHHHHHHHHhcCceEEEecCCCCchhhhhhhhc
Confidence 467789999999999999999987443 3444444
No 380
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=26.38 E-value=89 Score=26.45 Aligned_cols=55 Identities=16% Similarity=0.194 Sum_probs=37.9
Q ss_pred chHHhhhhcCccEEEEeccceeec--------CCccCccHHHHHHHHHHCCCcEEEEeCCCCC
Q 021350 20 GLRHIAETRRFKAWLLDQFGVLHD--------GKKPYPGAISTLEMLATTGAKMVVISNSSRR 74 (313)
Q Consensus 20 ~~~~~~~~~~~k~iifDlDGTL~~--------~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~ 74 (313)
.+++|++.-+....+=-+.|-+|- ..+++|++.++|++.++.|+++.+.+..+.+
T Consensus 69 ~~~~wiaed~K~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~ 131 (229)
T COG4229 69 LLLEWIAEDSKDTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVK 131 (229)
T ss_pred HHHHHHhcccccchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCch
Confidence 344555422344455556677775 2367899999999999999999988855543
No 381
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=26.34 E-value=2.2e+02 Score=26.01 Aligned_cols=25 Identities=8% Similarity=-0.069 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
-+++.++|..|+++|.++ ++|++..
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~R 173 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDR 173 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCH
Confidence 489999999999999998 8888544
No 382
>PRK00075 cbiD cobalt-precorrin-6A synthase; Reviewed
Probab=25.87 E-value=3.2e+02 Score=25.71 Aligned_cols=42 Identities=21% Similarity=0.336 Sum_probs=36.1
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 231 ~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
..+++.++++++.+.+|.+||-+..=++.|...|+..|.+..
T Consensus 212 ge~~a~~~~~l~~~~~V~~gnfiG~~L~~A~~~g~~~i~l~G 253 (361)
T PRK00075 212 GEDYARKLLGLPEDAIIKMGNFVGPMLKAAARLGVKKVLLVG 253 (361)
T ss_pred HHHHHHHhcCCChhhEEEeehhHHHHHHHHHHcCCCEEEEEe
Confidence 566777778999999999999997778899999999888854
No 383
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=25.61 E-value=1.2e+02 Score=27.54 Aligned_cols=48 Identities=23% Similarity=0.279 Sum_probs=39.9
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHH------cCCcEEEEcCCC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANA------AGIQSVFIIGGI 274 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~------aG~~~i~V~~G~ 274 (313)
-|+++.|..++..+||+.+++|++=|+- +-.-++++ +|..-|.|+-|.
T Consensus 72 lp~~e~fa~~~~~~GI~~d~tVVvYdd~-~~~~A~ra~W~l~~~Gh~~V~iLdGG 125 (285)
T COG2897 72 LPSPEQFAKLLGELGIRNDDTVVVYDDG-GGFFAARAWWLLRYLGHENVRILDGG 125 (285)
T ss_pred CCCHHHHHHHHHHcCCCCCCEEEEECCC-CCeehHHHHHHHHHcCCCceEEecCC
Confidence 6899999999999999999999998883 66666654 499888887753
No 384
>COG3785 Uncharacterized conserved protein [Function unknown]
Probab=25.51 E-value=46 Score=25.13 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=29.0
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeC
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISN 70 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn 70 (313)
.|.+|+||+|=.--++++.+.....-++-++.+-.--+++-|
T Consensus 27 pfrGVV~DvDPeyanteew~~~ip~~~rp~rdqPfYHllaEn 68 (116)
T COG3785 27 PFRGVVFDVDPEYANTEEWPDEIPVNIRPLRDQPFYHLLAEN 68 (116)
T ss_pred ccceEEEecCcccccCccChhhccccccccccCCceeeeeec
Confidence 799999999999888777766666555555555433344444
No 385
>PRK10444 UMP phosphatase; Provisional
Probab=24.79 E-value=1.2e+02 Score=26.67 Aligned_cols=25 Identities=16% Similarity=0.275 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
.++..++++.++++|.++ ++||...
T Consensus 19 ~p~a~~~l~~L~~~g~~~~~~Tn~~~ 44 (248)
T PRK10444 19 VPGAAEFLHRILDKGLPLVLLTNYPS 44 (248)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCC
Confidence 578889999999999998 7898655
No 386
>COG2896 MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism]
Probab=24.75 E-value=4.1e+02 Score=24.57 Aligned_cols=122 Identities=15% Similarity=0.148 Sum_probs=69.3
Q ss_pred ccceeecC-CccC-ccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcccccccchHHHHHHHHHhcCchhh
Q 021350 37 QFGVLHDG-KKPY-PGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSLFAGAITSGELTHQYLLRRDDAWF 114 (313)
Q Consensus 37 lDGTL~~~-~~~~-~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~~~~ii~~~~~~~~~l~~~~~~~~ 114 (313)
++=+-+.+ ++++ .+..+.+..+.+.++.-+-+|-||......+..|+..|+..-. -.+=+-.......+...+.
T Consensus 60 v~kvRlTGGEPllR~dl~eIi~~l~~~~~~~islTTNG~~L~~~a~~Lk~AGl~rVN-VSLDsld~e~f~~IT~~~~--- 135 (322)
T COG2896 60 VEKVRLTGGEPLLRKDLDEIIARLARLGIRDLSLTTNGVLLARRAADLKEAGLDRVN-VSLDSLDPEKFRKITGRDR--- 135 (322)
T ss_pred cceEEEeCCCchhhcCHHHHHHHHhhcccceEEEecchhhHHHHHHHHHHcCCcEEE-eecccCCHHHHHHHhCCCc---
Confidence 34444444 4444 4677778777777776666675665677888889999987433 1111111122223332210
Q ss_pred hhcCCeEEEeecCcccchhhccCCccccCCCCCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCcE
Q 021350 115 AALGRSCIHMTWSDRGAISLEGLGLKVVENVEEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIPM 188 (313)
Q Consensus 115 ~~~g~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~ 188 (313)
+.....+.....+.|+.- -+.+.+++ +.++-.++...++.++..|..+
T Consensus 136 ---------~~~Vl~GI~~A~~~Gl~p----VKlN~Vv~-------------kgvNd~ei~~l~e~~~~~~~~l 183 (322)
T COG2896 136 ---------LDRVLEGIDAAVEAGLTP----VKLNTVLM-------------KGVNDDEIEDLLEFAKERGAQL 183 (322)
T ss_pred ---------HHHHHHHHHHHHHcCCCc----eEEEEEEe-------------cCCCHHHHHHHHHHHhhcCCce
Confidence 111112334455566631 12245555 5577789999999999888766
No 387
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=24.57 E-value=2.3e+02 Score=26.03 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=25.6
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHH
Q 021350 48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKL 82 (313)
Q Consensus 48 ~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l 82 (313)
.|...+.++.+++.|+.+.+.||... .+..+.+
T Consensus 144 ~p~l~eli~~~k~~Gi~~~L~TNG~~--~e~l~~L 176 (322)
T PRK13762 144 YPYLPELIEEFHKRGFTTFLVTNGTR--PDVLEKL 176 (322)
T ss_pred hhhHHHHHHHHHHcCCCEEEECCCCC--HHHHHHH
Confidence 46788999999999999999999864 3444444
No 388
>PF03671 Ufm1: Ubiquitin fold modifier 1 protein; InterPro: IPR005375 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade. There are many different E3 ligases, which are responsible for the type of ubiquitin chain formed, the specificity of the target protein, and the regulation of the ubiquitinylation process []. Ubiquitinylation is an important regulatory tool that controls the concentration of key signalling proteins, such as those involved in cell cycle control, as well as removing misfolded, damaged or mutant proteins that could be harmful to the cell. Several ubiquitin-like molecules have been discovered, such as Ufm1 (IPR005375 from INTERPRO), SUMO1 (IPR003653 from INTERPRO), NEDD8, Rad23 (IPR004806 from INTERPRO), Elongin B and Parkin (IPR003977 from INTERPRO), the latter being involved in Parkinson's disease []. Ubiquitin-like molecules (UBLs) can be divided into two subclasses: type-1 UBLs, which ligate to target proteins in a manner similar, but not identical, to the ubiquitylation pathway, such as SUMO, NEDD8, and UCRP/ISG15, and type-2 UBLs (also called UDPs, ubiquitin-domain proteins), which contain ubiquitin-like structure embedded in a variety of different classes of large proteins with apparently distinct functions, such as Rad23, Elongin B, Scythe, Parkin, and HOIL-1. This entry represents Ufm1 (ubiquitin-fold modifier), which is a ubiquitin-like protein with structural similarities to ubiquitin [, ]. Ufm1 is one of a number of ubiquitin-like modifiers that conjugate to target proteins in cells through Uba5 (E1) and Ufc1 (E2). The Ufm1-system is conserved in metazoa and plants, suggesting it has a potential role in multicellular organisms []. Human Ufm1 is synthesized as a precursor consisting of 85 amino-acid residues. Prior to activation by Uba5, the extra amino acids at the C-terminal region of Ufm1 are removed to expose Gly, which is necessary for conjugation to target molecule(s). C-terminal processing of Ufm1 requires two specific cysteine peptidases (IPR012462 from INTERPRO): UfSP1 and UfSP2; both peptidases are also able to release Ufm1 from Ufm1-conjugated cellular proteins. UfSP2 is present in most, if not all, of multi-cellular organisms including plant, nematode, fly, and mammal, whereas UfSP1 is not present in plants and nematodes []. For further information on ubiquitin, please see Protein of the Month [].; PDB: 1J0G_A 1WXS_A 1L7Y_A.
Probab=24.29 E-value=18 Score=25.31 Aligned_cols=38 Identities=21% Similarity=0.204 Sum_probs=27.8
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHcC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLHHDIKGANAAG 264 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG 264 (313)
-|....++++++.+.+++..+..|-++ ...|-+.+.+|
T Consensus 26 apftaVlkfaAeeF~vp~~tsaiItnd-G~GInP~QTag 63 (76)
T PF03671_consen 26 APFTAVLKFAAEEFKVPPATSAIITND-GVGINPQQTAG 63 (76)
T ss_dssp SBHHHHHHHHHHHTTS-SSSEEEEESS-S-EE-TTSBHH
T ss_pred CchHHHHHHHHHHcCCCCceEEEEecC-Ccccccchhhh
Confidence 466668999999999999999999877 36666666554
No 389
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=24.20 E-value=3.1e+02 Score=21.99 Aligned_cols=112 Identities=16% Similarity=0.152 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHhcCce-eecCCCCHHHHHHHHHHhCCCCCcEEE
Q 021350 170 SLQDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEV-RWMGKPDKIIYKSAMAMVGVDACDSIA 248 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~gKP~~~~~~~~~~~lgv~~~~~v~ 248 (313)
.++.+.+.+..|... +.+++.++|+. |++....+.+|... ..+--.++..=..+.+.|+-+-+.|+|
T Consensus 31 lf~ev~e~iqeL~d~-V~i~IASgDr~-----------gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 31 LFSEVSETIQELHDM-VDIYIASGDRK-----------GSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred EcHhhHHHHHHHHHh-heEEEecCCcc-----------hHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEEEE
Confidence 467888888888877 77766666652 56666666666543 234445666777778888877799999
Q ss_pred EcCCchhhHHHHHHcCCcEEEEcCCCCCCcccccCCCCccchhhHHHHH
Q 021350 249 VGDSLHHDIKGANAAGIQSVFIIGGIHATELGLDSYGEVADLSSVQTLV 297 (313)
Q Consensus 249 IGDs~~~Di~~a~~aG~~~i~V~~G~~~~~~~~~~~~~~~~~~~~~~~~ 297 (313)
|||.. ||+.+.++|.+.-+-+.-+.-....++ -++..++++.+.+
T Consensus 99 VGnGa-ND~laLr~ADlGI~tiq~e~v~~r~l~---~ADvvik~i~e~l 143 (152)
T COG4087 99 VGNGA-NDILALREADLGICTIQQEGVPERLLL---TADVVLKEIAEIL 143 (152)
T ss_pred ecCCc-chHHHhhhcccceEEeccCCcchHHHh---hchhhhhhHHHHH
Confidence 99996 999999999877666654333333221 2234455555543
No 390
>PF08353 DUF1727: Domain of unknown function (DUF1727); InterPro: IPR013564 This domain of unknown function is found at the C terminus of bacterial proteins which include UDP-N-acetylmuramyl tripeptide synthase and the related Mur ligase.
Probab=23.95 E-value=1.8e+02 Score=22.27 Aligned_cols=35 Identities=34% Similarity=0.403 Sum_probs=27.9
Q ss_pred HHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 55 LEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 55 l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
+++|.+.+++.++++ |....+++-+|+=-|++...
T Consensus 46 FE~L~~~~i~~viv~--G~Ra~DmalRLkyAGv~~~~ 80 (113)
T PF08353_consen 46 FEKLADPNIKQVIVS--GTRAEDMALRLKYAGVDEEK 80 (113)
T ss_pred HHHHhcCCCCEEEEE--eeeHHHHHhHeeecCcchHH
Confidence 456777778888888 87788999999988998544
No 391
>cd06301 PBP1_rhizopine_binding_like Periplasmic binding proteins specific to rhizopines. Periplasmic binding proteins specific to rhizopines, which are simple sugar-like compounds produced in the nodules induced by the symbiotic root nodule bacteria, such as Rhizobium and Sinorhizobium. Rhizopine-binding-like proteins from other bacteria are also included. Two inositol based rhizopine compounds are known to date: L-3-O-methly-scyllo-inosamine (3-O-MSI) and scyllo-inosamine. Bacterial strains that can metabolize rhizopine have a greater competitive advantage in nodulation and rhizopine synthesis is regulated by NifA/NtrA regulatory transcription activators which are maximally expressed at the onset of nitrogen fixation in bacteroids. The members of this group belong to the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily.
Probab=23.74 E-value=4.6e+02 Score=22.37 Aligned_cols=22 Identities=18% Similarity=0.016 Sum_probs=14.8
Q ss_pred HHHHHHHHhCCCCCcEEEEcCC
Q 021350 231 IYKSAMAMVGVDACDSIAVGDS 252 (313)
Q Consensus 231 ~~~~~~~~lgv~~~~~v~IGDs 252 (313)
....+++..|+.|+++-++|=+
T Consensus 197 ~~~~~l~~~g~~~~di~ivg~d 218 (272)
T cd06301 197 GAIMALKAAGKSDKDVPVAGID 218 (272)
T ss_pred HHHHHHHHcCCCCCCcEEEeeC
Confidence 3456666778888777777643
No 392
>cd06831 PLPDE_III_ODC_like_AZI Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase-like Antizyme Inhibitor. Antizyme inhibitor (AZI) is homologous to the fold type III PLP-dependent enzyme ODC but does not retain any decarboxylase activity. Like ODC, AZI is presumed to exist as a homodimer. Antizyme is a regulatory protein that binds directly to the ODC monomer to block its active site, leading to its degradation by the 26S proteasome. AZI binds to Antizyme with a higher affinity than ODC, preventing the formation of the Antizyme-ODC complex. Thus, AZI blocks the ability of Antizyme to promote ODC degradation, which leads to increased ODC enzymatic activity and polyamine levels. AZI also prevents the degradation of other proteins regulated by Antizyme, such as cyclin D1.
Probab=23.61 E-value=3.7e+02 Score=25.47 Aligned_cols=56 Identities=18% Similarity=0.156 Sum_probs=33.8
Q ss_pred HHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcCC-chhhHHHHHHcCCcEEEE
Q 021350 211 ASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGDS-LHHDIKGANAAGIQSVFI 270 (313)
Q Consensus 211 ~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs-~~~Di~~a~~aG~~~i~V 270 (313)
.+.+...|......+.+. ++.++ ..|++++++++-|-. ...+++.|.+.|+..+-|
T Consensus 52 l~~l~~~G~g~DvaS~gE---l~~al-~~G~~~~~Iif~gp~K~~~~l~~a~~~Gv~~i~v 108 (394)
T cd06831 52 LEILAALGTGFACSSKNE---MALVQ-ELGVSPENIIYTNPCKQASQIKYAAKVGVNIMTC 108 (394)
T ss_pred HHHHHHcCCCeEeCCHHH---HHHHH-hcCCCcCCEEEeCCCCCHHHHHHHHHCCCCEEEE
Confidence 334444454445555444 44443 368888888887763 246788888888766544
No 393
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=23.11 E-value=65 Score=26.52 Aligned_cols=25 Identities=8% Similarity=-0.001 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
++++.++|+.|+++|+++ ++||...
T Consensus 31 ~pgv~e~L~~Lk~~g~~l~I~Tn~~~ 56 (181)
T PRK08942 31 IPGSIEAIARLKQAGYRVVVATNQSG 56 (181)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 478899999999999998 8898653
No 394
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=22.91 E-value=2.8e+02 Score=26.66 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHHHhCCCcE---EEEcCCccccccchhccCCchHHHHHHHhcCc-----------eeecCCCCHHHHH
Q 021350 168 PMSLQDLEKILEICASKKIPM---VVANPDYVTVEARALRVMPGTLASKFEKLGGE-----------VRWMGKPDKIIYK 233 (313)
Q Consensus 168 ~~~~~~~~~~l~~l~~~g~~~---i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~-----------~~~~gKP~~~~~~ 233 (313)
.++.+.++.+++.+++.|.++ ++||+.. |.+. .+.+..+..++..+.++ ..+++|+.=..+.
T Consensus 207 ~itv~alE~A~~~A~~~~~kVkGvlitNPsN--PLG~--~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ 282 (471)
T KOG0256|consen 207 QITVEALEAALNQARKLGLKVKGVLITNPSN--PLGT--TLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVL 282 (471)
T ss_pred cccHHHHHHHHHHHHHhCCceeEEEEeCCCC--CCCC--ccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHH
Confidence 366789999999998888775 7899765 3333 24445666666665432 2457888645555
Q ss_pred HHHHHhCCCCCcEEEEcCCchhhHHHHHHcCCcEEEEcC
Q 021350 234 SAMAMVGVDACDSIAVGDSLHHDIKGANAAGIQSVFIIG 272 (313)
Q Consensus 234 ~~~~~lgv~~~~~v~IGDs~~~Di~~a~~aG~~~i~V~~ 272 (313)
.+.+...++++++=.|= ++..| .|+++.-|..
T Consensus 283 ev~~~~~~~~~rvHivy-slSKD------~GlpGfRvGv 314 (471)
T KOG0256|consen 283 EVRKDPHLDPDRVHIVY-SLSKD------FGLPGFRVGV 314 (471)
T ss_pred HHhhccccCCCcEEEEE-Eeccc------cCCCceEEEE
Confidence 55665666666654442 22244 5555554443
No 395
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=22.79 E-value=1.5e+02 Score=24.82 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCccccccchhccCCchHHHHHHHhcCceeecCCCCHHHHHHHHHHhCCCCCcEEEEcC
Q 021350 172 QDLEKILEICASKKIPMVVANPDYVTVEARALRVMPGTLASKFEKLGGEVRWMGKPDKIIYKSAMAMVGVDACDSIAVGD 251 (313)
Q Consensus 172 ~~~~~~l~~l~~~g~~~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGD 251 (313)
+-....+..++++|++++..|....-........ +..++..+-.....+.=.++ .-..-+.++|++++++.+.||
T Consensus 105 ElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~----~~~~~r~~l~~f~~i~aqs~-~da~r~~~lG~~~~~v~v~Gn 179 (186)
T PF04413_consen 105 ELWPNLLREAKRRGIPVVLVNARLSERSFRRYRR----FPFLFRPLLSRFDRILAQSE-ADAERFRKLGAPPERVHVTGN 179 (186)
T ss_dssp ---HHHHHH-----S-EEEEEE------------------HHHHHHGGG-SEEEESSH-HHHHHHHTTT-S--SEEE---
T ss_pred ccCHHHHHHHhhcCCCEEEEeeeeccccchhhhh----hHHHHHHHHHhCCEEEECCH-HHHHHHHHcCCCcceEEEeCc
Confidence 3344567777889999977664432221111111 11122222111112222232 233445568999999999998
Q ss_pred CchhhHH
Q 021350 252 SLHHDIK 258 (313)
Q Consensus 252 s~~~Di~ 258 (313)
- +-|..
T Consensus 180 l-Kfd~~ 185 (186)
T PF04413_consen 180 L-KFDQA 185 (186)
T ss_dssp G-GG---
T ss_pred c-hhccc
Confidence 7 67754
No 396
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=22.74 E-value=1.6e+02 Score=24.40 Aligned_cols=22 Identities=18% Similarity=0.366 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEc
Q 021350 171 LQDLEKILEICASKKIPM-VVAN 192 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn 192 (313)
|+++..+|..|+++|+++ ++|.
T Consensus 47 ypdv~~iL~~L~~~gv~lavASR 69 (169)
T PF12689_consen 47 YPDVPEILQELKERGVKLAVASR 69 (169)
T ss_dssp -TTHHHHHHHHHHCT--EEEEE-
T ss_pred CcCHHHHHHHHHHCCCEEEEEEC
Confidence 689999999999999999 5653
No 397
>PRK10834 vancomycin high temperature exclusion protein; Provisional
Probab=22.74 E-value=3.9e+02 Score=23.53 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=60.5
Q ss_pred CCCCEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCCCc-EEEEcCCccccccchhccCCchHHHHHHHhcCc----
Q 021350 146 EEADFILAHGTEGMGLPSGDVRPMSLQDLEKILEICASKKIP-MVVANPDYVTVEARALRVMPGTLASKFEKLGGE---- 220 (313)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~-~i~tn~d~~~~~~~~~~~~~g~~~~~~~~~~~~---- 220 (313)
...+++++.|...+.. .|........-+..+++..++.... +++|.+...... -++..+...+...|..
T Consensus 43 p~~d~ivVLGa~~~~~-~g~ps~~l~~Rl~~A~~LYk~gk~~~ilvSGg~~~~~~-----~Ea~~M~~yLi~~GVp~e~I 116 (239)
T PRK10834 43 PYRQVGVVLGTAKYYR-TGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSY-----NEPMTMRKDLIAAGVDPSDI 116 (239)
T ss_pred CCCCEEEEcCCcccCC-CCCcCHHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCCC-----CHHHHHHHHHHHcCCCHHHE
Confidence 3457777766422210 0111222235677777765655554 467765421110 1112233333333432
Q ss_pred -eeecCCCCHHHHHHHHHHhCCCCCcEEEEcCCch--hhHHHHHHcCCcEEEEc
Q 021350 221 -VRWMGKPDKIIYKSAMAMVGVDACDSIAVGDSLH--HDIKGANAAGIQSVFII 271 (313)
Q Consensus 221 -~~~~gKP~~~~~~~~~~~lgv~~~~~v~IGDs~~--~Di~~a~~aG~~~i~V~ 271 (313)
-...|.-.-+....+.+.++. .+++.|-+.++ .=+..|++.|+..+.+.
T Consensus 117 i~e~~s~nT~en~~~a~~i~~~--~~~iIVTq~fHm~RA~~ia~~~Gi~~~~~~ 168 (239)
T PRK10834 117 VLDYAGFRTLDSIVRTRKVFDT--NDFIIITQRFHCERALFIALHMGIQAQCYA 168 (239)
T ss_pred EecCCCCCHHHHHHHHHHHhCC--CCEEEECCHHHHHHHHHHHHHcCCceEEEe
Confidence 123445555555556666653 56888888752 34556788899987775
No 398
>PF03537 Glyco_hydro_114: Glycoside-hydrolase family GH114; InterPro: IPR004352 Eighty-one archaeal-like genes, ranging in size from 4-20kb, are clustered in 15 regions of the Thermotoga maritima genome []. Conservation of gene order between T. maritima and Archaea in many of these regions suggests that lateral gene transfer may have occurred between thermophilic Eubacteria and Archaea []. One of the T. maritima sequences (hypothetical protein TM1410) shares similarity with Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1477 and with hypothetical protein DR0705 from Deinococcus radiodurans. The sequences are characterised by relatively variable N- and C-terminal domains, and a more conserved central domain. They share no similarity with any other known, functionally or structurally characterised proteins. ; PDB: 2AAM_F.
Probab=22.71 E-value=1.5e+02 Score=20.80 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=19.1
Q ss_pred CccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEE
Q 021350 29 RFKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVI 68 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~ 68 (313)
.++++++|+.. ...+.|..|+++|..+ ++
T Consensus 26 ~~~v~~iD~~~----------~~~~~I~~L~~~G~~v-ic 54 (74)
T PF03537_consen 26 DVDVVVIDLFD----------FSKEEIARLKAQGKKV-IC 54 (74)
T ss_dssp S-SEEEE-SBS------------HHHHHHHHHTT-EE-EE
T ss_pred CCCEEEECCcc----------CCHHHHHHHHHCCCEE-EE
Confidence 78999999886 3467888999999544 44
No 399
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=22.62 E-value=3.7e+02 Score=25.22 Aligned_cols=39 Identities=15% Similarity=0.259 Sum_probs=28.0
Q ss_pred CccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCCCcc
Q 021350 48 YPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFDPSL 91 (313)
Q Consensus 48 ~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~~~~ 91 (313)
+....+.+.+|++.|++++++|.. .++.=++.+|++...
T Consensus 30 l~~l~~~ia~L~~~G~eVilVSSG-----AiaaG~~~Lg~~~rp 68 (369)
T COG0263 30 LEELVRQVAALHKAGHEVVLVSSG-----AIAAGRTRLGLPKRP 68 (369)
T ss_pred HHHHHHHHHHHHhCCCEEEEEccc-----hhhhChhhcCCCCCC
Confidence 345677888999999999999932 234445667887544
No 400
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=22.54 E-value=1.2e+02 Score=30.29 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=38.4
Q ss_pred ccEEEEeccceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 30 FKAWLLDQFGVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 30 ~k~iifDlDGTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
.+.+++|+.++-.-.......-.+..++++++|+.+.++. ..+.+.+.++..|+.
T Consensus 494 ~~~vIlD~~~V~~iDsSg~~~L~~l~~~l~~~g~~l~l~~----~~~~v~~~l~~~gl~ 548 (563)
T TIGR00815 494 LQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLAN----PNKAVRSTLKRGGLV 548 (563)
T ss_pred ceEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEec----CChHHHHHHHHCCch
Confidence 4799999998744333333344556667888999888755 345678888888885
No 401
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=22.43 E-value=87 Score=21.68 Aligned_cols=21 Identities=24% Similarity=0.476 Sum_probs=15.3
Q ss_pred HHHHHHHhCCCCCcEEEEcCC
Q 021350 232 YKSAMAMVGVDACDSIAVGDS 252 (313)
Q Consensus 232 ~~~~~~~lgv~~~~~v~IGDs 252 (313)
...++++.|+...++|.|||-
T Consensus 45 v~~~L~~~G~~~GD~V~Ig~~ 65 (69)
T PF09269_consen 45 VEKALRKAGAKEGDTVRIGDY 65 (69)
T ss_dssp HHHHHHTTT--TT-EEEETTE
T ss_pred HHHHHHHcCCCCCCEEEEcCE
Confidence 667788889999999999984
No 402
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=22.06 E-value=1.9e+02 Score=24.99 Aligned_cols=83 Identities=12% Similarity=0.111 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCccccccchhccCCchHHHHHHH-hcC--ceeecCCCCHHHHHHHHHHhCCCCCcE
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDYVTVEARALRVMPGTLASKFEK-LGG--EVRWMGKPDKIIYKSAMAMVGVDACDS 246 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~~~-~~~--~~~~~gKP~~~~~~~~~~~lgv~~~~~ 246 (313)
+++..+.+..++++|+++ ++||...... ..+...+.. .+. .+..+=.|.-.+-.++.++. +..++
T Consensus 16 ~~~a~e~i~~l~~~g~~~~~~tN~~~~~~---------~~~~~~l~~~~g~~~~~~~iits~~~~~~~l~~~~--~~~~v 84 (236)
T TIGR01460 16 IPGAAEALNRLRAKGKPVVFLTNNSSRSE---------EDYAEKLSSLLGVDVSPDQIITSGSVTKDLLRQRF--EGEKV 84 (236)
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCCCCH---------HHHHHHHHHhcCCCCCHHHeeeHHHHHHHHHHHhC--CCCEE
Confidence 568889999999999988 7888553211 122232333 222 12222233333334444332 34568
Q ss_pred EEEcCCchhhHHHHHHcCCc
Q 021350 247 IAVGDSLHHDIKGANAAGIQ 266 (313)
Q Consensus 247 v~IGDs~~~Di~~a~~aG~~ 266 (313)
+++|.. ...+.++..|+.
T Consensus 85 ~v~G~~--~~~~~l~~~g~~ 102 (236)
T TIGR01460 85 YVIGVG--ELRESLEGLGFR 102 (236)
T ss_pred EEECCH--HHHHHHHHcCCc
Confidence 999974 445666777864
No 403
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=21.96 E-value=3.7e+02 Score=28.46 Aligned_cols=48 Identities=21% Similarity=0.252 Sum_probs=33.7
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
|-|+=+-++-+++.+.|+.|...+++++++| |-.+-......+++||-
T Consensus 668 GFlif~CPlK~Ds~~~I~el~~SSH~vvMIT--GDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 668 GFLIFSCPLKPDSKKTIKELNNSSHRVVMIT--GDNPLTACHVAKEVGIV 715 (1160)
T ss_pred eeEEEeCCCCccHHHHHHHHhccCceEEEEe--CCCccchheehheeeee
Confidence 4444455667899999999999999999999 43333334444555664
No 404
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=21.94 E-value=81 Score=26.25 Aligned_cols=23 Identities=4% Similarity=0.159 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcC
Q 021350 171 LQDLEKILEICASKKIPM-VVANP 193 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~ 193 (313)
|+++.++++.|+++|+++ ++||.
T Consensus 47 ~pGv~elL~~Lk~~G~~l~I~Sn~ 70 (174)
T TIGR01685 47 IKEVRDVLQTLKDAGTYLATASWN 70 (174)
T ss_pred cccHHHHHHHHHHCCCEEEEEeCC
Confidence 689999999999999998 88875
No 405
>TIGR02666 moaA molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine.
Probab=21.83 E-value=3e+02 Score=25.20 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=28.4
Q ss_pred ccHHHHHHHHHH-CCC-cEEEEeCCCCCchHHHHHHHhCCCC
Q 021350 49 PGAISTLEMLAT-TGA-KMVVISNSSRRASTTIDKLKSLGFD 88 (313)
Q Consensus 49 ~~a~~~l~~l~~-~g~-~~~~~Tn~~~~~~~~~~~l~~~G~~ 88 (313)
++..+.++.+++ .|+ .+.+.||... ..+..+.+.+.|+.
T Consensus 74 ~~l~~li~~i~~~~gi~~v~itTNG~l-l~~~~~~L~~~gl~ 114 (334)
T TIGR02666 74 KDLVELVARLAALPGIEDIALTTNGLL-LARHAKDLKEAGLK 114 (334)
T ss_pred CCHHHHHHHHHhcCCCCeEEEEeCchh-HHHHHHHHHHcCCC
Confidence 678888888877 678 6777787653 34567788888875
No 406
>PLN02282 phosphoglycerate kinase
Probab=21.80 E-value=2.5e+02 Score=26.86 Aligned_cols=57 Identities=21% Similarity=0.373 Sum_probs=38.6
Q ss_pred ceeecCCccCccHHHHHHHHHHCCCcEEEEeCCCCCc--------hHHHHHHHh-CCCCCccccccc
Q 021350 39 GVLHDGKKPYPGAISTLEMLATTGAKMVVISNSSRRA--------STTIDKLKS-LGFDPSLFAGAI 96 (313)
Q Consensus 39 GTL~~~~~~~~~a~~~l~~l~~~g~~~~~~Tn~~~~~--------~~~~~~l~~-~G~~~~~~~~ii 96 (313)
|.+.+. .-+..+..+|+.|.++|.+++++|..+|+. +.+++.|.+ +|.++...++.+
T Consensus 34 g~I~dd-~RI~a~lpTI~~l~~~gakvVl~SHlGRP~g~~~~~SL~~va~~Ls~lL~~~V~fv~d~~ 99 (401)
T PLN02282 34 SNITDD-TRIRAAVPTIKYLMGHGARVILCSHLGRPKGVTPKYSLKPLVPRLSELLGVEVVMANDCI 99 (401)
T ss_pred CcccCc-HHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCCcccCHHHHHHHHHHHHCCCeEECCCCC
Confidence 555543 345667789999999999999999877763 345666654 777654433433
No 407
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=21.67 E-value=2.3e+02 Score=23.32 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=34.1
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCchhhHHHHHHc---CCcEEEEcCCCCCCc
Q 021350 231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANAA---GIQSVFIIGGIHATE 278 (313)
Q Consensus 231 ~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~a---G~~~i~V~~G~~~~~ 278 (313)
.+...++.+|+....+..|+|+. ..|..+-+. ..+-|.++.|.+...
T Consensus 23 ~l~~~L~~~G~~v~~~~~v~Dd~-~~I~~~l~~~~~~~dlVIttGG~G~t~ 72 (170)
T cd00885 23 FLAKELAELGIEVYRVTVVGDDE-DRIAEALRRASERADLVITTGGLGPTH 72 (170)
T ss_pred HHHHHHHHCCCEEEEEEEeCCCH-HHHHHHHHHHHhCCCEEEECCCCCCCC
Confidence 56677778999999999999996 777766532 566666665655544
No 408
>cd01037 Restriction_endonuclease_like Superfamily of nucleases including Short Patch Repair (Vsr) Endonucleases, archaeal Holliday junction resolvases, MutH methy-directed DNA mismatch-repair endonucleases, and catalytic domains of many restriction endonucleases, such as EcoRI, BamHI, and FokI
Probab=21.62 E-value=1.4e+02 Score=19.70 Aligned_cols=39 Identities=18% Similarity=0.280 Sum_probs=26.0
Q ss_pred cEEEEeccceeecCCccCccHH---HHHHHHHHCCCcEEEEe
Q 021350 31 KAWLLDQFGVLHDGKKPYPGAI---STLEMLATTGAKMVVIS 69 (313)
Q Consensus 31 k~iifDlDGTL~~~~~~~~~a~---~~l~~l~~~g~~~~~~T 69 (313)
..+++++||+-++......... +....+...|..+..+.
T Consensus 38 ~~~~ie~kg~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 79 (80)
T cd01037 38 AKLVIELKGTFHDGLLRKLRTSEKQERIAFLEADGKKVLRFW 79 (80)
T ss_pred CCEEEEEECccccCchhhhhhcchHHHHHHHHHCCCEEEEEe
Confidence 4678899999887654432222 45566778888877654
No 409
>PRK03670 competence damage-inducible protein A; Provisional
Probab=21.57 E-value=1.8e+02 Score=25.74 Aligned_cols=48 Identities=21% Similarity=0.238 Sum_probs=35.3
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCchhhHHHHHH-c---CCcEEEEcCCCCCCcc
Q 021350 231 IYKSAMAMVGVDACDSIAVGDSLHHDIKGANA-A---GIQSVFIIGGIHATEL 279 (313)
Q Consensus 231 ~~~~~~~~lgv~~~~~v~IGDs~~~Di~~a~~-a---G~~~i~V~~G~~~~~~ 279 (313)
.+...+..+|++..++..|+|+. .+|..+.+ + +.+.|+++.|.+...+
T Consensus 24 ~la~~L~~~G~~v~~~~iV~Dd~-~~I~~~l~~a~~~~~DlVIttGGlGpt~d 75 (252)
T PRK03670 24 FIAQKLTEKGYWVRRITTVGDDV-EEIKSVVLEILSRKPEVLVISGGLGPTHD 75 (252)
T ss_pred HHHHHHHHCCCEEEEEEEcCCCH-HHHHHHHHHHhhCCCCEEEECCCccCCCC
Confidence 56666778999999999999995 88877743 2 3566777767665554
No 410
>TIGR00343 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1. This protein had been believed to be a singlet oxygen resistance protein. Subsequent work showed that it is a protein of pyridoxine (vitamin B6) biosynthesis, and that pyridoxine quenches the highly toxic singlet form of oxygen produced by light in the presence of certain chemicals.
Probab=21.51 E-value=1.8e+02 Score=26.34 Aligned_cols=48 Identities=17% Similarity=0.199 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHhCCCCCcEE--EEc--CCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 227 PDKIIYKSAMAMVGVDACDSI--AVG--DSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 227 P~~~~~~~~~~~lgv~~~~~v--~IG--Ds~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
|..+.+..+.+..++| ++ ++| .++ .|+..+.++|+.+|+|.++..+..
T Consensus 184 ~~~elLkei~~~~~iP---VV~fAiGGI~TP-edAa~~melGAdGVaVGSaI~ks~ 235 (287)
T TIGR00343 184 VPVELLLEVLKLGKLP---VVNFAAGGVATP-ADAALMMQLGADGVFVGSGIFKSS 235 (287)
T ss_pred CCHHHHHHHHHhCCCC---EEEeccCCCCCH-HHHHHHHHcCCCEEEEhHHhhcCC
Confidence 7777888888876665 55 788 465 999999999999999999987544
No 411
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=21.25 E-value=99 Score=25.30 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHhCCCcE-EEEcCC
Q 021350 170 SLQDLEKILEICASKKIPM-VVANPD 194 (313)
Q Consensus 170 ~~~~~~~~l~~l~~~g~~~-i~tn~d 194 (313)
.++++.++++.|+++|.++ ++||..
T Consensus 44 ~~pgv~e~L~~Lk~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 44 AYPALRDWIEELKAAGRKLLIVSNNA 69 (170)
T ss_pred cChhHHHHHHHHHHcCCEEEEEeCCc
Confidence 3688999999999999988 889865
No 412
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=21.07 E-value=1.3e+02 Score=25.93 Aligned_cols=45 Identities=20% Similarity=0.154 Sum_probs=32.9
Q ss_pred eccceeecCCccC--cc-HHHHHHHHHHCCCcEEEEeCCCCCchHHHH
Q 021350 36 DQFGVLHDGKKPY--PG-AISTLEMLATTGAKMVVISNSSRRASTTID 80 (313)
Q Consensus 36 DlDGTL~~~~~~~--~~-a~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~ 80 (313)
.-.|+-+++.++. ++ +.+.++.+++.|+...+.||...+.+.+.+
T Consensus 38 sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~ 85 (213)
T PRK10076 38 SGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLP 85 (213)
T ss_pred CCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHH
Confidence 3479988877653 34 468888899999999999997655444433
No 413
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=20.88 E-value=3.6e+02 Score=21.17 Aligned_cols=49 Identities=18% Similarity=0.267 Sum_probs=33.0
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEcCCch-hhH------HHHHHcCCcEEEEcCCC
Q 021350 226 KPDKIIYKSAMAMVGVDACDSIAVGDSLH-HDI------KGANAAGIQSVFIIGGI 274 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v~IGDs~~-~Di------~~a~~aG~~~i~V~~G~ 274 (313)
.|+++-|...++.+|++++..|+|=|+-. ..+ -+++.+|..-+.|.-|.
T Consensus 77 ~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG 132 (138)
T cd01445 77 EPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGG 132 (138)
T ss_pred CCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCC
Confidence 67778899999999998876555544310 122 24556788888777654
No 414
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=20.81 E-value=52 Score=29.41 Aligned_cols=18 Identities=22% Similarity=0.063 Sum_probs=15.5
Q ss_pred CccEEEEeccceeecCCc
Q 021350 29 RFKAWLLDQFGVLHDGKK 46 (313)
Q Consensus 29 ~~k~iifDlDGTL~~~~~ 46 (313)
.-|.++.|+|.||+++..
T Consensus 88 ~kk~lVLDLDeTLvHss~ 105 (262)
T KOG1605|consen 88 GRKTLVLDLDETLVHSSL 105 (262)
T ss_pred CCceEEEeCCCccccccc
Confidence 458999999999998774
No 415
>PLN02591 tryptophan synthase
Probab=20.69 E-value=3.7e+02 Score=23.78 Aligned_cols=104 Identities=16% Similarity=0.151 Sum_probs=53.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCcEE-EEcCCccccccch-hccCCchHHHHHHHhcC-ceeecCCCCHHHHHHHHHHhCCCC
Q 021350 167 RPMSLQDLEKILEICASKKIPMV-VANPDYVTVEARA-LRVMPGTLASKFEKLGG-EVRWMGKPDKIIYKSAMAMVGVDA 243 (313)
Q Consensus 167 ~~~~~~~~~~~l~~l~~~g~~~i-~tn~d~~~~~~~~-~~~~~g~~~~~~~~~~~-~~~~~gKP~~~~~~~~~~~lgv~~ 243 (313)
+.++++...+....++++|+..+ +..+.....+-+. .....| +.-+ .+. ..++.....+..+...+++..=-.
T Consensus 113 pDLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~g-FIY~---Vs~~GvTG~~~~~~~~~~~~i~~vk~~~ 188 (250)
T PLN02591 113 PDLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEG-FVYL---VSSTGVTGARASVSGRVESLLQELKEVT 188 (250)
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCC-cEEE---eeCCCCcCCCcCCchhHHHHHHHHHhcC
Confidence 55778999999999999998773 3333321111000 000011 0000 011 011111111223444344332123
Q ss_pred CcEEEEcCCc--hhhHHHHHHcCCcEEEEcCCC
Q 021350 244 CDSIAVGDSL--HHDIKGANAAGIQSVFIIGGI 274 (313)
Q Consensus 244 ~~~v~IGDs~--~~Di~~a~~aG~~~i~V~~G~ 274 (313)
+--+++|=.. ..|+..+...|.+.+.|.|..
T Consensus 189 ~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGSal 221 (250)
T PLN02591 189 DKPVAVGFGISKPEHAKQIAGWGADGVIVGSAM 221 (250)
T ss_pred CCceEEeCCCCCHHHHHHHHhcCCCEEEECHHH
Confidence 5556666554 248888889999999999865
No 416
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=20.51 E-value=1.2e+02 Score=20.92 Aligned_cols=21 Identities=24% Similarity=0.463 Sum_probs=18.4
Q ss_pred HHHHHHHhCCCCCcEEEEcCC
Q 021350 232 YKSAMAMVGVDACDSIAVGDS 252 (313)
Q Consensus 232 ~~~~~~~lgv~~~~~v~IGDs 252 (313)
...++++.|+.+.++|.|||-
T Consensus 45 v~~~L~~~G~~~GD~V~Ig~~ 65 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIGDF 65 (69)
T ss_pred HHHHHHHcCCCCCCEEEEccE
Confidence 677888899999999999984
No 417
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=20.42 E-value=1.9e+02 Score=25.42 Aligned_cols=25 Identities=8% Similarity=0.139 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcCCc
Q 021350 171 LQDLEKILEICASKKIPM-VVANPDY 195 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~d~ 195 (313)
.++..++++.++++|.++ ++||...
T Consensus 23 ~~~a~~al~~l~~~G~~~~~~Tn~~~ 48 (257)
T TIGR01458 23 VPGSQEAVKRLRGASVKVRFVTNTTK 48 (257)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCCC
Confidence 468899999999999998 8898555
No 418
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=20.17 E-value=2e+02 Score=26.96 Aligned_cols=23 Identities=13% Similarity=0.024 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHhCCCcE-EEEcC
Q 021350 171 LQDLEKILEICASKKIPM-VVANP 193 (313)
Q Consensus 171 ~~~~~~~l~~l~~~g~~~-i~tn~ 193 (313)
++++.+.|..|+++|+++ ++||.
T Consensus 32 ~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 32 EPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CcCHHHHHHHHHhCCCeEEEEECC
Confidence 688999999999999998 89995
No 419
>cd04727 pdxS PdxS is a subunit of the pyridoxal 5'-phosphate (PLP) synthase, an important enzyme in deoxyxylulose 5-phosphate (DXP)-independent pathway for de novo biosynthesis of PLP, present in some eubacteria, in archaea, fungi, plants, plasmodia, and some metazoa. Together with PdxT, PdxS forms the PLP synthase, a heteromeric glutamine amidotransferase (GATase), whereby PdxT produces ammonia from glutamine and PdxS combines ammonia with five- and three-carbon phosphosugars to form PLP. PLP is the biologically active form of vitamin B6, an essential cofactor in many biochemical processes. PdxS subunits form two hexameric rings.
Probab=20.08 E-value=2.6e+02 Score=25.28 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHhCCCCCcEE--EEc--CCchhhHHHHHHcCCcEEEEcCCCCCCc
Q 021350 226 KPDKIIYKSAMAMVGVDACDSI--AVG--DSLHHDIKGANAAGIQSVFIIGGIHATE 278 (313)
Q Consensus 226 KP~~~~~~~~~~~lgv~~~~~v--~IG--Ds~~~Di~~a~~aG~~~i~V~~G~~~~~ 278 (313)
.|..+.+..+.+..++| ++ ++| .++ .|+.-+..+|+.++.|.++..+..
T Consensus 180 ~~d~elLk~l~~~~~iP---VV~iAeGGI~Tp-ena~~v~e~GAdgVaVGSAI~~a~ 232 (283)
T cd04727 180 QAPYELVKETAKLGRLP---VVNFAAGGVATP-ADAALMMQLGADGVFVGSGIFKSE 232 (283)
T ss_pred CCCHHHHHHHHHhcCCC---eEEEEeCCCCCH-HHHHHHHHcCCCEEEEcHHhhcCC
Confidence 47778888888877765 54 899 465 899999999999999999987543
No 420
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=20.07 E-value=2.8e+02 Score=25.35 Aligned_cols=83 Identities=22% Similarity=0.187 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhC----CCcE-EEEcCCccccccchhccCCchHHHHH-HHhcCc--eeecCCCCHHHHHHHHHHhCCC
Q 021350 171 LQDLEKILEICASK----KIPM-VVANPDYVTVEARALRVMPGTLASKF-EKLGGE--VRWMGKPDKIIYKSAMAMVGVD 242 (313)
Q Consensus 171 ~~~~~~~l~~l~~~----g~~~-i~tn~d~~~~~~~~~~~~~g~~~~~~-~~~~~~--~~~~gKP~~~~~~~~~~~lgv~ 242 (313)
.++..++++.++.+ |+++ ++||..-.... .+...+ ..+|.. ...+--+.. .....+++++
T Consensus 18 i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~---------~~~~~l~~~lG~~~~~~~i~~s~~-~~~~ll~~~~-- 85 (321)
T TIGR01456 18 IAGASDALRRLNRNQGQLKIPYIFLTNGGGFSER---------ARAEEISSLLGVDVSPLQVIQSHS-PYKSLVNKYE-- 85 (321)
T ss_pred cHHHHHHHHHHhccccccCCCEEEEecCCCCCHH---------HHHHHHHHHcCCCCCHHHHHhhhH-HHHHHHHHcC--
Confidence 68899999999887 9888 78885432111 112222 223321 101111111 2233344442
Q ss_pred CCcEEEEcCCchhhHHHHHHcCCcEE
Q 021350 243 ACDSIAVGDSLHHDIKGANAAGIQSV 268 (313)
Q Consensus 243 ~~~~v~IGDs~~~Di~~a~~aG~~~i 268 (313)
..+++||-+ .=.+.++.+|+..+
T Consensus 86 -~~v~viG~~--~~~~~l~~~G~~~v 108 (321)
T TIGR01456 86 -KRILAVGTG--SVRGVAEGYGFQNV 108 (321)
T ss_pred -CceEEEeCh--HHHHHHHHcCCccc
Confidence 368899876 34677778897765
Done!