Query 021352
Match_columns 313
No_of_seqs 217 out of 1941
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 09:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021352.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021352hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.2E-79 4.9E-84 530.4 19.9 301 13-313 2-303 (303)
2 KOG0373 Serine/threonine speci 100.0 2.4E-73 5.3E-78 485.9 20.5 302 12-313 4-306 (306)
3 PTZ00239 serine/threonine prot 100.0 4.2E-70 9.1E-75 503.8 32.6 301 13-313 2-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.1E-69 2.4E-74 498.2 30.6 284 14-297 2-285 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 8.3E-69 1.8E-73 497.4 30.2 284 10-294 3-321 (321)
6 PTZ00480 serine/threonine-prot 100.0 5.2E-68 1.1E-72 491.4 30.7 289 11-300 8-305 (320)
7 cd07416 MPP_PP2B PP2B, metallo 100.0 3.9E-67 8.5E-72 485.9 31.5 286 13-300 2-301 (305)
8 cd07417 MPP_PP5_C PP5, C-termi 100.0 5.9E-67 1.3E-71 485.9 29.8 294 10-304 12-312 (316)
9 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 5.6E-67 1.2E-71 482.1 28.7 282 14-296 2-292 (293)
10 PTZ00244 serine/threonine-prot 100.0 1.9E-66 4E-71 478.1 29.8 282 13-295 3-293 (294)
11 KOG0371 Serine/threonine prote 100.0 1E-67 2.2E-72 460.7 17.4 309 5-313 11-319 (319)
12 KOG0374 Serine/threonine speci 100.0 3E-66 6.5E-71 481.2 24.6 272 26-297 31-304 (331)
13 smart00156 PP2Ac Protein phosp 100.0 3.7E-65 8E-70 466.3 28.9 269 27-296 1-270 (271)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 6E-63 1.3E-67 459.7 28.6 272 24-295 18-311 (311)
15 cd07418 MPP_PP7 PP7, metalloph 100.0 2.2E-62 4.7E-67 461.0 30.7 290 10-299 8-370 (377)
16 KOG0375 Serine-threonine phosp 100.0 1.4E-61 3E-66 438.6 14.2 289 9-299 43-345 (517)
17 KOG0377 Protein serine/threoni 100.0 2.9E-52 6.3E-57 385.9 14.9 296 1-301 112-437 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.5E-44 3.3E-49 341.2 13.4 290 14-304 170-466 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.6E-35 3.5E-40 263.6 22.3 214 57-281 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 2.3E-28 5E-33 221.0 19.3 193 54-285 1-225 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 1.6E-28 3.4E-33 216.9 14.8 178 57-268 1-198 (208)
22 cd07423 MPP_PrpE Bacillus subt 100.0 5.5E-27 1.2E-31 210.7 18.7 201 54-285 1-222 (234)
23 PRK00166 apaH diadenosine tetr 99.9 2.3E-27 4.9E-32 217.1 15.4 218 54-284 1-260 (275)
24 cd07413 MPP_PA3087 Pseudomonas 99.9 5.1E-27 1.1E-31 209.2 17.0 116 57-175 2-143 (222)
25 PHA02239 putative protein phos 99.9 3.8E-26 8.2E-31 204.9 16.9 175 54-269 1-221 (235)
26 cd07421 MPP_Rhilphs Rhilph pho 99.9 5.8E-26 1.3E-30 206.6 18.1 197 55-282 3-291 (304)
27 PRK11439 pphA serine/threonine 99.9 4.1E-26 8.8E-31 203.0 15.6 179 53-269 16-208 (218)
28 cd07422 MPP_ApaH Escherichia c 99.9 7.7E-26 1.7E-30 205.0 13.6 121 56-180 1-127 (257)
29 TIGR00668 apaH bis(5'-nucleosy 99.9 6.8E-26 1.5E-30 205.9 12.2 123 54-180 1-129 (279)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 8.7E-25 1.9E-29 192.9 18.7 190 54-279 1-204 (207)
31 PRK09968 serine/threonine-spec 99.9 3.4E-23 7.4E-28 184.1 16.2 180 53-269 14-208 (218)
32 cd00841 MPP_YfcE Escherichia c 99.5 5.7E-13 1.2E-17 111.7 14.3 82 55-174 1-85 (155)
33 PF00149 Metallophos: Calcineu 99.5 2.1E-13 4.5E-18 112.5 10.6 160 54-248 1-199 (200)
34 PRK09453 phosphodiesterase; Pr 99.5 1.3E-12 2.8E-17 112.9 14.5 69 54-126 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.4 2.4E-12 5.2E-17 108.6 13.9 63 54-125 1-64 (158)
36 PF12850 Metallophos_2: Calcin 99.4 3.4E-12 7.4E-17 106.4 12.3 137 54-266 1-137 (156)
37 cd07379 MPP_239FB Homo sapiens 99.3 2.3E-11 5E-16 99.9 10.2 118 55-253 1-120 (135)
38 cd07388 MPP_Tt1561 Thermus the 99.2 4.9E-10 1.1E-14 99.9 17.1 71 54-125 5-75 (224)
39 cd07397 MPP_DevT Myxococcus xa 99.2 1.9E-10 4.2E-15 103.0 13.7 157 55-249 2-208 (238)
40 cd07394 MPP_Vps29 Homo sapiens 99.2 5.7E-10 1.2E-14 96.2 15.0 126 55-267 1-135 (178)
41 cd07392 MPP_PAE1087 Pyrobaculu 99.1 6.6E-10 1.4E-14 95.4 11.1 65 56-126 1-66 (188)
42 PRK05340 UDP-2,3-diacylglucosa 99.0 2.2E-08 4.7E-13 90.4 15.5 209 54-294 1-239 (241)
43 cd00838 MPP_superfamily metall 98.9 8.1E-09 1.8E-13 82.1 10.5 117 57-253 1-119 (131)
44 cd07399 MPP_YvnB Bacillus subt 98.9 4E-08 8.6E-13 87.1 15.2 193 55-295 2-213 (214)
45 COG0622 Predicted phosphoester 98.9 3.3E-08 7.1E-13 84.6 14.0 161 54-296 2-166 (172)
46 cd07400 MPP_YydB Bacillus subt 98.9 4.1E-08 8.9E-13 81.0 12.9 117 56-253 1-129 (144)
47 cd07403 MPP_TTHA0053 Thermus t 98.9 2.3E-08 5.1E-13 81.6 11.0 107 57-253 1-107 (129)
48 cd07404 MPP_MS158 Microscilla 98.9 9.7E-09 2.1E-13 87.1 8.6 67 56-125 1-68 (166)
49 COG2129 Predicted phosphoester 98.8 1.4E-07 3.1E-12 82.8 14.3 193 53-293 3-224 (226)
50 cd07385 MPP_YkuE_C Bacillus su 98.7 6.1E-08 1.3E-12 85.8 10.0 70 54-125 2-76 (223)
51 PRK11340 phosphodiesterase Yae 98.7 8.5E-08 1.8E-12 88.1 10.8 71 53-125 49-125 (271)
52 TIGR03729 acc_ester putative p 98.7 3.5E-08 7.6E-13 88.8 7.9 68 55-125 1-74 (239)
53 PF06874 FBPase_2: Firmicute f 98.7 5.1E-07 1.1E-11 89.5 14.8 72 224-297 506-587 (640)
54 PRK04036 DNA polymerase II sma 98.7 4E-07 8.8E-12 90.6 13.9 73 52-126 242-344 (504)
55 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 7.5E-08 1.6E-12 86.3 7.0 68 56-125 1-81 (231)
56 COG0639 ApaH Diadenosine tetra 98.6 1.1E-07 2.3E-12 77.7 7.1 142 128-270 4-154 (155)
57 cd07395 MPP_CSTP1 Homo sapiens 98.5 8.6E-06 1.9E-10 74.1 18.3 58 226-285 195-253 (262)
58 cd07402 MPP_GpdQ Enterobacter 98.5 4.8E-07 1E-11 80.9 9.9 67 55-125 1-83 (240)
59 cd07383 MPP_Dcr2 Saccharomyces 98.5 2.9E-06 6.4E-11 74.1 12.5 70 54-123 3-87 (199)
60 PRK11148 cyclic 3',5'-adenosin 98.4 1.5E-05 3.3E-10 73.2 17.5 72 52-125 13-98 (275)
61 cd07393 MPP_DR1119 Deinococcus 98.4 2.4E-06 5.2E-11 76.6 11.2 68 56-125 1-84 (232)
62 cd07396 MPP_Nbla03831 Homo sap 98.4 8E-06 1.7E-10 74.8 14.6 72 55-126 2-87 (267)
63 cd07390 MPP_AQ1575 Aquifex aeo 98.3 2.2E-06 4.7E-11 73.1 7.6 66 56-126 1-83 (168)
64 COG2908 Uncharacterized protei 98.3 4E-06 8.7E-11 74.4 9.3 200 57-287 1-229 (237)
65 cd07398 MPP_YbbF-LpxH Escheric 98.3 1.2E-06 2.7E-11 77.1 5.7 29 225-253 177-205 (217)
66 cd08165 MPP_MPPE1 human MPPE1 98.2 1.7E-05 3.8E-10 66.8 10.1 48 78-125 36-89 (156)
67 TIGR00619 sbcd exonuclease Sbc 98.1 6.7E-06 1.5E-10 74.8 6.5 72 54-125 1-88 (253)
68 cd07401 MPP_TMEM62_N Homo sapi 98.0 4.3E-05 9.4E-10 69.6 10.9 71 56-126 2-90 (256)
69 COG1409 Icc Predicted phosphoh 98.0 0.00011 2.4E-09 67.1 13.4 73 54-128 1-81 (301)
70 PHA02546 47 endonuclease subun 97.9 1.4E-05 3.1E-10 75.8 6.2 72 54-125 1-89 (340)
71 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.8 9.8E-05 2.1E-09 67.5 8.5 70 56-125 1-86 (262)
72 cd00840 MPP_Mre11_N Mre11 nucl 97.8 4.4E-05 9.5E-10 67.2 5.7 72 55-127 1-91 (223)
73 cd07391 MPP_PF1019 Pyrococcus 97.7 7.4E-05 1.6E-09 63.8 6.7 59 68-126 29-89 (172)
74 TIGR00024 SbcD_rel_arch putati 97.7 0.00011 2.4E-09 65.7 6.8 69 54-126 15-103 (225)
75 cd07384 MPP_Cdc1_like Saccharo 97.6 0.00065 1.4E-08 58.1 10.3 50 77-126 42-101 (171)
76 TIGR00583 mre11 DNA repair pro 97.6 0.00016 3.6E-09 70.0 7.1 55 52-106 2-68 (405)
77 PRK10966 exonuclease subunit S 97.5 0.00018 3.9E-09 69.9 5.6 72 54-126 1-88 (407)
78 cd08166 MPP_Cdc1_like_1 unchar 97.4 0.002 4.3E-08 56.2 11.0 48 78-125 40-93 (195)
79 cd08163 MPP_Cdc1 Saccharomyces 97.4 0.0034 7.3E-08 57.3 13.0 31 224-256 203-233 (257)
80 cd07380 MPP_CWF19_N Schizosacc 97.4 0.0016 3.5E-08 54.5 9.5 119 57-248 1-121 (150)
81 COG1408 Predicted phosphohydro 97.3 0.00038 8.1E-09 64.4 5.9 72 53-126 44-119 (284)
82 cd07386 MPP_DNA_pol_II_small_a 97.3 0.00032 6.9E-09 63.2 5.1 68 57-126 2-95 (243)
83 COG3855 Fbp Uncharacterized pr 97.2 0.0025 5.4E-08 61.4 9.6 40 81-125 191-230 (648)
84 cd00839 MPP_PAPs purple acid p 97.1 0.00039 8.5E-09 64.1 3.7 69 54-126 5-82 (294)
85 COG4186 Predicted phosphoester 96.8 0.0032 6.9E-08 52.5 6.1 66 56-125 6-86 (186)
86 PF14582 Metallophos_3: Metall 96.8 0.00076 1.6E-08 59.7 2.4 73 53-126 5-103 (255)
87 cd00845 MPP_UshA_N_like Escher 96.7 0.0023 5E-08 57.7 4.8 66 55-125 2-82 (252)
88 COG0420 SbcD DNA repair exonuc 96.6 0.0047 1E-07 59.6 6.8 73 54-126 1-89 (390)
89 COG1407 Predicted ICC-like pho 96.6 0.0042 9.2E-08 55.5 5.8 74 52-128 18-113 (235)
90 cd07387 MPP_PolD2_C PolD2 (DNA 96.4 0.12 2.6E-06 47.1 14.0 50 239-293 205-257 (257)
91 KOG3325 Membrane coat complex 96.4 0.038 8.2E-07 45.8 9.6 116 56-254 3-124 (183)
92 COG1311 HYS2 Archaeal DNA poly 96.3 0.044 9.5E-07 53.6 11.2 206 54-295 226-472 (481)
93 cd00842 MPP_ASMase acid sphing 96.1 0.051 1.1E-06 50.3 10.2 71 56-127 40-124 (296)
94 PLN02533 probable purple acid 96.1 0.0066 1.4E-07 59.5 4.3 71 53-126 139-212 (427)
95 cd07410 MPP_CpdB_N Escherichia 96.0 0.0074 1.6E-07 55.4 4.2 65 55-124 2-94 (277)
96 cd08164 MPP_Ted1 Saccharomyces 96.0 0.016 3.5E-07 50.5 6.0 66 60-125 23-111 (193)
97 COG1768 Predicted phosphohydro 95.8 0.014 3.1E-07 49.8 4.6 44 79-126 42-87 (230)
98 KOG0376 Serine-threonine phosp 95.4 0.0077 1.7E-07 58.6 2.0 114 26-141 14-132 (476)
99 cd07378 MPP_ACP5 Homo sapiens 94.9 0.048 1E-06 49.8 5.5 25 226-250 190-214 (277)
100 cd07412 MPP_YhcR_N Bacillus su 94.9 0.022 4.8E-07 52.7 3.2 65 55-124 2-87 (288)
101 cd07408 MPP_SA0022_N Staphyloc 94.8 0.044 9.5E-07 49.8 4.9 65 55-124 2-81 (257)
102 PF08321 PPP5: PPP5 TPR repeat 94.5 0.056 1.2E-06 41.6 4.0 43 10-52 53-95 (95)
103 cd07411 MPP_SoxB_N Thermus the 93.4 0.12 2.7E-06 47.0 4.9 65 55-125 2-95 (264)
104 KOG2863 RNA lariat debranching 93.3 0.15 3.2E-06 48.2 5.1 74 54-127 1-90 (456)
105 cd07409 MPP_CD73_N CD73 ecto-5 93.3 0.15 3.2E-06 47.0 5.2 66 55-125 2-94 (281)
106 cd07406 MPP_CG11883_N Drosophi 92.3 0.22 4.7E-06 45.3 4.9 64 56-124 3-82 (257)
107 KOG1432 Predicted DNA repair e 92.0 0.62 1.3E-05 43.9 7.4 47 78-125 98-147 (379)
108 KOG3662 Cell division control 91.8 0.35 7.6E-06 46.7 5.8 71 54-124 49-143 (410)
109 TIGR00282 metallophosphoestera 91.8 0.27 5.8E-06 45.1 4.8 67 54-125 1-71 (266)
110 PRK09419 bifunctional 2',3'-cy 91.7 0.2 4.2E-06 55.3 4.5 66 54-124 661-735 (1163)
111 KOG1378 Purple acid phosphatas 91.3 0.4 8.6E-06 46.9 5.6 32 227-258 322-353 (452)
112 cd07405 MPP_UshA_N Escherichia 90.0 0.29 6.3E-06 45.2 3.3 66 55-125 2-87 (285)
113 KOG3339 Predicted glycosyltran 89.1 3.9 8.4E-05 35.4 9.1 85 82-172 40-140 (211)
114 PF04042 DNA_pol_E_B: DNA poly 88.8 0.51 1.1E-05 41.1 3.9 72 56-127 1-93 (209)
115 cd07382 MPP_DR1281 Deinococcus 87.2 1.1 2.4E-05 40.8 5.1 66 55-125 1-70 (255)
116 COG0737 UshA 5'-nucleotidase/2 86.1 0.69 1.5E-05 46.4 3.5 69 52-125 25-115 (517)
117 cd08162 MPP_PhoA_N Synechococc 85.9 0.92 2E-05 42.6 4.0 65 55-124 2-90 (313)
118 cd07407 MPP_YHR202W_N Saccharo 85.0 0.97 2.1E-05 41.8 3.6 67 54-125 6-97 (282)
119 PRK09420 cpdB bifunctional 2', 83.6 1.3 2.9E-05 45.8 4.3 68 52-124 24-121 (649)
120 TIGR01390 CycNucDiestase 2',3' 83.2 1.4 3E-05 45.5 4.2 66 54-124 3-98 (626)
121 KOG2476 Uncharacterized conser 82.6 2.9 6.3E-05 40.9 5.8 69 53-122 5-75 (528)
122 PRK09419 bifunctional 2',3'-cy 82.4 1.4 3.1E-05 48.7 4.1 67 53-124 41-138 (1163)
123 PTZ00235 DNA polymerase epsilo 77.1 6.8 0.00015 36.3 6.2 74 53-126 27-123 (291)
124 PRK09558 ushA bifunctional UDP 76.6 2.5 5.5E-05 42.8 3.6 67 53-124 34-120 (551)
125 PRK11907 bifunctional 2',3'-cy 76.3 3.2 7E-05 44.0 4.3 67 53-124 115-212 (814)
126 KOG0918 Selenium-binding prote 76.0 0.16 3.6E-06 48.5 -4.7 94 81-180 48-144 (476)
127 TIGR01530 nadN NAD pyrophospha 74.3 5.2 0.00011 40.5 5.1 64 56-124 3-93 (550)
128 KOG3947 Phosphoesterases [Gene 74.1 5.3 0.00012 36.7 4.5 66 53-126 61-127 (305)
129 PTZ00422 glideosome-associated 73.8 4.8 0.0001 39.0 4.5 73 53-125 26-109 (394)
130 KOG2310 DNA repair exonuclease 72.7 8.6 0.00019 38.6 5.9 56 51-106 11-78 (646)
131 PRK09418 bifunctional 2',3'-cy 65.5 6.3 0.00014 41.7 3.6 68 52-124 38-141 (780)
132 cd07381 MPP_CapA CapA and rela 61.0 17 0.00038 32.2 5.2 40 229-270 199-238 (239)
133 KOG2679 Purple (tartrate-resis 60.7 8.3 0.00018 35.5 3.0 90 32-125 18-126 (336)
134 PF13258 DUF4049: Domain of un 57.5 35 0.00076 30.7 6.3 89 82-177 86-187 (318)
135 smart00854 PGA_cap Bacterial c 51.3 37 0.00081 30.2 5.7 35 233-269 201-235 (239)
136 PF09587 PGA_cap: Bacterial ca 50.3 38 0.00083 30.3 5.6 40 229-270 208-247 (250)
137 PF02875 Mur_ligase_C: Mur lig 48.3 40 0.00086 24.9 4.6 68 54-121 12-81 (91)
138 PF07827 KNTase_C: KNTase C-te 45.8 33 0.00072 28.2 4.0 37 1-41 86-122 (143)
139 cd07378 MPP_ACP5 Homo sapiens 43.5 1.3E+02 0.0028 27.0 8.1 69 55-125 2-83 (277)
140 COG3855 Fbp Uncharacterized pr 43.1 13 0.00029 36.6 1.5 42 225-266 514-562 (648)
141 PRK10773 murF UDP-N-acetylmura 40.2 71 0.0015 31.4 6.2 66 54-120 325-392 (453)
142 cd07382 MPP_DR1281 Deinococcus 39.7 33 0.00072 31.2 3.5 40 83-125 1-40 (255)
143 TIGR00282 metallophosphoestera 39.0 23 0.0005 32.5 2.3 39 83-125 2-41 (266)
144 cd00839 MPP_PAPs purple acid p 36.7 65 0.0014 29.2 5.0 25 226-250 182-206 (294)
145 TIGR03767 P_acnes_RR metalloph 35.2 1.7E+02 0.0036 29.5 7.7 66 225-292 367-441 (496)
146 PLN02965 Probable pheophorbida 34.2 1.4E+02 0.0031 26.2 6.7 21 227-247 59-81 (255)
147 PF09949 DUF2183: Uncharacteri 33.7 1.5E+02 0.0032 22.9 5.7 43 69-117 52-94 (100)
148 PF10083 DUF2321: Uncharacteri 30.1 20 0.00044 30.0 0.4 48 222-275 20-76 (158)
149 PF12641 Flavodoxin_3: Flavodo 29.2 2.5E+02 0.0054 23.5 6.9 52 57-108 2-66 (160)
150 COG1692 Calcineurin-like phosp 28.5 77 0.0017 28.8 3.8 13 238-250 169-181 (266)
151 COG4320 Uncharacterized protei 28.4 40 0.00087 31.8 2.0 58 44-109 47-108 (410)
152 COG4030 Uncharacterized protei 27.1 2.9E+02 0.0063 25.0 7.1 59 55-124 183-241 (315)
153 PRK00485 fumC fumarate hydrata 26.5 4E+02 0.0086 26.5 8.9 87 22-108 60-151 (464)
154 PRK14066 exodeoxyribonuclease 24.4 77 0.0017 23.2 2.6 42 7-49 6-47 (75)
155 TIGR01143 murF UDP-N-acetylmur 24.1 2.4E+02 0.0052 27.2 6.8 95 26-122 270-365 (417)
156 TIGR00550 nadA quinolinate syn 23.5 1E+02 0.0023 28.9 3.9 59 28-90 2-62 (310)
157 TIGR01428 HAD_type_II 2-haloal 23.4 2.3E+02 0.0049 23.8 5.8 67 54-123 109-175 (198)
158 TIGR00024 SbcD_rel_arch putati 23.3 2E+02 0.0043 25.5 5.5 60 23-90 34-99 (225)
159 COG0634 Hpt Hypoxanthine-guani 23.2 4.9E+02 0.011 22.4 9.5 75 26-104 11-116 (178)
160 PF02609 Exonuc_VII_S: Exonucl 23.0 1.1E+02 0.0023 20.5 2.9 36 9-45 3-38 (53)
161 PF06861 BALF1: BALF1 protein; 22.0 1.5E+02 0.0033 25.3 4.2 82 27-126 53-134 (182)
162 COG0770 MurF UDP-N-acetylmuram 21.5 3.4E+02 0.0074 26.9 7.2 94 27-121 300-395 (451)
163 TIGR00758 UDG_fam4 uracil-DNA 20.5 4.5E+02 0.0099 22.0 7.0 72 52-125 20-113 (173)
164 PF06490 FleQ: Flagellar regul 20.0 1.7E+02 0.0036 22.7 3.9 64 55-125 1-81 (109)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-79 Score=530.42 Aligned_cols=301 Identities=65% Similarity=1.213 Sum_probs=291.5
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceec
Q 021352 13 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVD 92 (313)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vD 92 (313)
.+++.++++.+++.+++.++..||.+++++|.+|++++.++.|+.|+|||||++.+|..+|+..|..+++.|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecC
Q 021352 93 RGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHG 172 (313)
Q Consensus 93 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHg 172 (313)
||.+|+|++.+|+.||.+||+++.+||||||.+.+...|||++||.++||+..+|+.+.+.|..||++|+|++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccce
Q 021352 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGY 252 (313)
Q Consensus 173 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~ 252 (313)
|++|++.++++|+.++|.++.|+++.++|++||||.+..+|..+|||+||.||++.+++|++.||+++|+|+||.+.+||
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGy 241 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGY 241 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecCCCCCCCCCCCC-CCCCCC
Q 021352 253 NWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRR-TPDYFL 313 (313)
Q Consensus 253 ~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 313 (313)
++.++++++|||||||||++|+|.||+|.||++....|+.|+..|..++..-.++ +.+||+
T Consensus 242 k~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 242 KWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 9999999999999999999999999999999999999999999998877544333 339985
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-73 Score=485.90 Aligned_cols=302 Identities=60% Similarity=1.106 Sum_probs=293.7
Q ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeecee
Q 021352 12 GNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYV 91 (313)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~v 91 (313)
-.++++|+.+++++.++++|++.||+.++++|..|.++.|++.|+.|+|||||++.+|.++++..|.-|.+.|||+||+|
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEec
Q 021352 92 DRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLH 171 (313)
Q Consensus 92 DrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vH 171 (313)
|||..|+|++.+++.||.+||.++.+||||||.+.+...|||++||..+||+...|+...+.|.-|+++|+|+++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccc
Q 021352 172 GGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEG 251 (313)
Q Consensus 172 gGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G 251 (313)
||+||++..+|+|+.+.|.++.|+.+.++|++||||++.+.|..+|||+||.||.+.+.+|+..|++++|.|+||.+++|
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCe-EEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021352 252 YNWGHEQK-VVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 313 (313)
Q Consensus 252 ~~~~~~~~-~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (313)
|.+.++++ ++|++||||||++|+|.|++|.+|++++.+++.|...|-.++-.-+|....||+
T Consensus 244 ~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 244 FKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred HHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 99888777 999999999999999999999999999999999999998877666788889985
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=4.2e-70 Score=503.80 Aligned_cols=301 Identities=55% Similarity=1.071 Sum_probs=283.9
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceec
Q 021352 13 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVD 92 (313)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vD 92 (313)
+++++++++.++..++++++.+||++|+++|++||++++++.+++|||||||++.+|.++|+..+..+.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 47889999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecC
Q 021352 93 RGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHG 172 (313)
Q Consensus 93 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHg 172 (313)
||++++|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccce
Q 021352 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGY 252 (313)
Q Consensus 173 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~ 252 (313)
|++|...++++++.+.|+.+.|.++.++|++||||.+..+|.+++||.|+.||++++++||+++++++||||||++++||
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 241 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGY 241 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccce
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred EEecC-CeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021352 253 NWGHE-QKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 313 (313)
Q Consensus 253 ~~~~~-~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (313)
+..++ ++++||||||+||+..+|.||+|.++++..+.|++|+|.+........+..+.||.
T Consensus 242 ~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 242 KYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred EEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 98764 55999999999999999999999999999999999999988654443444467874
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.1e-69 Score=498.24 Aligned_cols=284 Identities=75% Similarity=1.308 Sum_probs=275.6
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecC
Q 021352 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 93 (313)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDr 93 (313)
++++++++.++..++++++.+||++|++++++||++++++.+++|||||||++.+|.++|+..+.++.+++|||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 68899999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCC
Q 021352 94 GYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGG 173 (313)
Q Consensus 94 G~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgG 173 (313)
|++++|++.++++++..+|.++++||||||.+.++..+||..|+..+|+...+|..+.++|+.||++++++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021352 174 LSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253 (313)
Q Consensus 174 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~ 253 (313)
|+|...++++++.+.|+.+.+.++.+.|++||||.+..+|.+++||.|+.||++++++||+++++++||||||++++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~ 241 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQ 241 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEE
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecCC
Q 021352 254 WGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAP 297 (313)
Q Consensus 254 ~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 297 (313)
+.++++++||||||+||+..+|.||+|.|+++..++|++|+|+|
T Consensus 242 ~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 242 WMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999875
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=8.3e-69 Score=497.45 Aligned_cols=284 Identities=32% Similarity=0.613 Sum_probs=260.2
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----CceeeccCCCCHHHHHHHHHHcCCCC-CCce
Q 021352 10 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKS----PVTICGDIHGQFHDLAELFRIGGKCP-DTNY 84 (313)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~----~i~viGDiHG~~~~l~~il~~~~~~~-~~~~ 84 (313)
+...++++++++.++..++++++.+||++|+++|++||+++++.. |++|||||||++.+|.++|+..|.++ .+++
T Consensus 3 ~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~ 82 (321)
T cd07420 3 TKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPY 82 (321)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceE
Confidence 456799999999999999999999999999999999999998865 89999999999999999999999875 4679
Q ss_pred eeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCC--chhHHHHHHHHhcCCceEE
Q 021352 85 LFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTDLFDYFPLTAL 162 (313)
Q Consensus 85 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~ 162 (313)
||||||||||++|+||+.+|++||..+|+++++||||||.+.++..|||..|+..+|+. ..+|..+.++|+.||++++
T Consensus 83 lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaai 162 (321)
T cd07420 83 VFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATI 162 (321)
T ss_pred EEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999974 6799999999999999999
Q ss_pred EcCcEEEecCCCCCCccchhhhhccccccC-----CCC----------------------CCccccccccCCCCCCC-CC
Q 021352 163 VESEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WG 214 (313)
Q Consensus 163 i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsdp~~~~~-~~ 214 (313)
++++++||||||++ ..++++++.+.|+.. .|. .+++.|+|||||....+ |.
T Consensus 163 i~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~ 241 (321)
T cd07420 163 IDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKP 241 (321)
T ss_pred EcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCc
Confidence 99999999999986 467888888877421 111 13578999999987544 77
Q ss_pred cCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEee
Q 021352 215 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFE 294 (313)
Q Consensus 215 ~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~ 294 (313)
+++||.|+.||++++++||+++++++||||||++++||++.++++++|||||++||+..+|.||+|.|++++.++|.+|.
T Consensus 242 ~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 242 NTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999998874
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=5.2e-68 Score=491.43 Aligned_cols=289 Identities=45% Similarity=0.907 Sum_probs=275.4
Q ss_pred cccHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCC
Q 021352 11 HGNLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDT 82 (313)
Q Consensus 11 ~~~~~~~~~~~~~~~--------~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~ 82 (313)
...++++++++.+.. .++++++.+||++|+++|++||.+++++.+++|||||||++.+|.++|+..+.++.+
T Consensus 8 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~ 87 (320)
T PTZ00480 8 EIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPES 87 (320)
T ss_pred CcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcc
Confidence 345899999998553 699999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEE
Q 021352 83 NYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTAL 162 (313)
Q Consensus 83 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~ 162 (313)
++||||||||||++++|++.+++++|..+|.++++||||||...++..+||..|+..+|+ ..+|..+.++|..||++|+
T Consensus 88 ~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAi 166 (320)
T PTZ00480 88 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAAL 166 (320)
T ss_pred eEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhhe
Confidence 999999999999999999999999999999999999999999999999999999999994 6799999999999999999
Q ss_pred EcCcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEE
Q 021352 163 VESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLI 241 (313)
Q Consensus 163 i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~i 241 (313)
++++++||||||+|.+.++++++.+.|+.+.|.++++.|++||||.. ..+|.+++||.|+.||++++++||+++++++|
T Consensus 167 I~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~I 246 (320)
T PTZ00480 167 IDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLI 246 (320)
T ss_pred ecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEE
Confidence 99999999999999999999999999999999999999999999986 67899999999999999999999999999999
Q ss_pred EeeccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecCCCCC
Q 021352 242 ARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRG 300 (313)
Q Consensus 242 VrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 300 (313)
|||||++++||++.++++++||||||+||+..+|.||+|.|++++.+.|.+|.|.+...
T Consensus 247 iR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~ 305 (320)
T PTZ00480 247 CRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQ 305 (320)
T ss_pred EEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccc
Confidence 99999999999999999999999999999999999999999999999999999887663
No 7
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.9e-67 Score=485.95 Aligned_cols=286 Identities=43% Similarity=0.760 Sum_probs=270.2
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceec
Q 021352 13 NLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVD 92 (313)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vD 92 (313)
.++-+++++.++..++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.++.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecC
Q 021352 93 RGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHG 172 (313)
Q Consensus 93 rG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHg 172 (313)
||++|+|++.+++++|..+|.++++||||||.+.++..++|..++..+| ...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 9999999999999999999999999999999999999999999999888 467899999999999999999999999999
Q ss_pred CCCCCccchhhhhccccccCCCCCCccccccccCCCCCC-------CCCc-CCCCCccccCHHHHHHHHHhCCceEEEee
Q 021352 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRC-------GWGI-SPRGAGYTFGQDISEQFNHTNNLKLIARA 244 (313)
Q Consensus 173 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~-------~~~~-~~r~~~~~fg~~~~~~fl~~~~~~~iVrG 244 (313)
|++|.+.++++++.+.|+.+.|..++++|++||||.... +|.+ ++||.++.||++++++||+++++++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999999989999999999997522 3655 48999999999999999999999999999
Q ss_pred ccccccceEEecCC------eEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecCCCCC
Q 021352 245 HQLVMEGYNWGHEQ------KVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRG 300 (313)
Q Consensus 245 H~~~~~G~~~~~~~------~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 300 (313)
||++++||++.+++ +++||||||+||+.++|.||+|.|+++. +.|.+|.++|++-
T Consensus 241 He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~~ 301 (305)
T cd07416 241 HEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHPY 301 (305)
T ss_pred ccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCCC
Confidence 99999999998775 8999999999999999999999999884 7999999999874
No 8
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=5.9e-67 Score=485.85 Aligned_cols=294 Identities=37% Similarity=0.718 Sum_probs=274.3
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCC----ceeeccCCCCHHHHHHHHHHcCCCCC-Cce
Q 021352 10 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSP----VTICGDIHGQFHDLAELFRIGGKCPD-TNY 84 (313)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~----i~viGDiHG~~~~l~~il~~~~~~~~-~~~ 84 (313)
+...+++++++++++..++++++.+||++|++++++||++++++.+ ++||||||||+.+|.++|+..++++. +++
T Consensus 12 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~y 91 (316)
T cd07417 12 TLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPY 91 (316)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeE
Confidence 3456889999999999999999999999999999999999888644 99999999999999999999998754 569
Q ss_pred eeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEc
Q 021352 85 LFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 164 (313)
Q Consensus 85 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 164 (313)
||||||||||++|+||+.+++++|..+|.++++||||||.+.++..++|..|+..+|+ ..+|..+.++|+.||++++++
T Consensus 92 lFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~ 170 (316)
T cd07417 92 LFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLIN 170 (316)
T ss_pred EEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeC
Confidence 9999999999999999999999999999999999999999999999999999998884 678999999999999999999
Q ss_pred CcEEEecCCC-CCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEe
Q 021352 165 SEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243 (313)
Q Consensus 165 ~~~~~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVr 243 (313)
++++|||||+ ++...++++++.+.|+.+.+.++++.|++||||.+..+|.+++||.|+.||++++++||+++++++|||
T Consensus 171 ~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 250 (316)
T cd07417 171 GKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIR 250 (316)
T ss_pred CeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEE
Confidence 9999999999 456788999999999988888899999999999988889999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcC-CCceEEEEeecCCCCCCCCC
Q 021352 244 AHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDD-CKGHTFIQFEPAPRRGEPDV 304 (313)
Q Consensus 244 GH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~~~~~~~~~~ 304 (313)
|||++++||++.++++++||||||+||+..+|.||+|.|++ ++.++|++|.+.|++.-.+.
T Consensus 251 ~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 312 (316)
T cd07417 251 SHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPNVKPM 312 (316)
T ss_pred CCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCCCCcc
Confidence 99999999999999999999999999999999999999998 88999999999987765543
No 9
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=5.6e-67 Score=482.06 Aligned_cols=282 Identities=46% Similarity=0.960 Sum_probs=267.7
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCcee
Q 021352 14 LDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYL 85 (313)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~v 85 (313)
++++++++.... .++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 466777776543 699999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcC
Q 021352 86 FMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVES 165 (313)
Q Consensus 86 fLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~ 165 (313)
|||||||||++++|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+ ..+|..+.++|++||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999984 6789999999999999999999
Q ss_pred cEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEee
Q 021352 166 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARA 244 (313)
Q Consensus 166 ~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrG 244 (313)
+++|||||++|.+.++++++.+.|+.+.|.++.+.|++||||.. ..+|.+++||.|+.||++++++||+++|+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999999999999999999976 67899999999999999999999999999999999
Q ss_pred ccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecC
Q 021352 245 HQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPA 296 (313)
Q Consensus 245 H~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 296 (313)
||++++||++.++++++||||||+||+..+|.||+|.|+++..+.|.+|+|.
T Consensus 241 He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999864
No 10
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.9e-66 Score=478.06 Aligned_cols=282 Identities=40% Similarity=0.804 Sum_probs=265.8
Q ss_pred cHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCce
Q 021352 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNY 84 (313)
Q Consensus 13 ~~~~~~~~~~~~~--------~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~ 84 (313)
-++++++++.+.. .++++++.+|+++++++|++||++++++.+++||||||||+.+|.++|+..+.++.+++
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~ 82 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNY 82 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccE
Confidence 3566666665432 68999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEc
Q 021352 85 LFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 164 (313)
Q Consensus 85 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 164 (313)
+|||||||||+++.|++.+++++|..+|.+++++|||||.+.++..+||..++..+|+ ..+|..+.++|+.||++++++
T Consensus 83 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 83 LFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEec
Confidence 9999999999999999999999999999999999999999999999999999999995 678999999999999999999
Q ss_pred CcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEe
Q 021352 165 SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243 (313)
Q Consensus 165 ~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVr 243 (313)
++++|||||++|.+.++++++.+.|+.+.+.++++.|++||||.. ..+|.+++||.|+.||++++++||+++++++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 999999999999999999999999999999889999999999986 6789999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeec
Q 021352 244 AHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEP 295 (313)
Q Consensus 244 GH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 295 (313)
|||++++||++.++++++||||||+||+..+|.||+|.|+++..++|.+|..
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999987753
No 11
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1e-67 Score=460.65 Aligned_cols=309 Identities=78% Similarity=1.339 Sum_probs=301.3
Q ss_pred CCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCce
Q 021352 5 SVPSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNY 84 (313)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~ 84 (313)
.+++.....++.+|+++.++.++++.++..+++.|+++|.+|.++.+++.+++|+||+||++++|.++++..|..+...+
T Consensus 11 ~~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtny 90 (319)
T KOG0371|consen 11 ILATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNY 90 (319)
T ss_pred ccccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcce
Confidence 34566677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEc
Q 021352 85 LFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 164 (313)
Q Consensus 85 vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 164 (313)
+|+|||||||++|.|++.++.++|.+||++|.+||||||.+.+...|||++||.++||+..+|..+.+.|..+|+.+.|+
T Consensus 91 lfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~ 170 (319)
T KOG0371|consen 91 LFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIE 170 (319)
T ss_pred eeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEee
Q 021352 165 SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARA 244 (313)
Q Consensus 165 ~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrG 244 (313)
++++|.|||++|++..++.++.++|..+.|+++..+|+||+||.++.+|..+|||.++.||.+..++|..++|+++|-|.
T Consensus 171 ~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRa 250 (319)
T KOG0371|consen 171 SKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRA 250 (319)
T ss_pred cceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021352 245 HQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 313 (313)
Q Consensus 245 H~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (313)
|+-+.+||.......++||||++|||++++|.+|+|.+++.+...|.||+|+|..-+..+.|++||||+
T Consensus 251 hqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 251 HQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred HHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 12
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3e-66 Score=481.18 Aligned_cols=272 Identities=49% Similarity=0.954 Sum_probs=265.3
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcC-CCCCCceeeeeceecCCCCcHHHHHHH
Q 021352 26 PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSVETVTLL 104 (313)
Q Consensus 26 ~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l 104 (313)
.++++++.+|+..+.+++..+|+++++++||.|+|||||++.+|.+++...| +++.++|||||||||||++|+|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhh
Q 021352 105 VSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184 (313)
Q Consensus 105 ~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i 184 (313)
+++|.+||+++++||||||.+.++..|||++||.++|+...+|..+.+.|+.||++++|+++++|+|||++|.+.+++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997678999999999999999999999999999999999999999
Q ss_pred hccccccCCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEE
Q 021352 185 RNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTI 263 (313)
Q Consensus 185 ~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti 263 (313)
+.+.||.+.|..++++|++|+||.. ..+|..+.||.++.||++++++||+++++++||||||++++||+++.+++++||
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTI 270 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTI 270 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEE
Confidence 9999999999999999999999987 699999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCcccCCCcEEEEEEcCCCceEEEEeecCC
Q 021352 264 FSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAP 297 (313)
Q Consensus 264 ~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 297 (313)
||||+||+.+.|.||+|.+|+++.+.|..+.|++
T Consensus 271 FSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~ 304 (331)
T KOG0374|consen 271 FSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEG 304 (331)
T ss_pred ecCchhccccCCceEEEEECCCCeEEEEEecccc
Confidence 9999999999999999999999999999999953
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=3.7e-65 Score=466.32 Aligned_cols=269 Identities=54% Similarity=0.987 Sum_probs=258.5
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHH
Q 021352 27 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVS 106 (313)
Q Consensus 27 ~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 106 (313)
++++++.+|+++|+++|++||++++++++++||||||||+++|.++|+..+.++.+++||||||||||++++|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhc
Q 021352 107 LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRN 186 (313)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~ 186 (313)
+|..+|.++++||||||.+.++..+||..++..+|+ ..+|..+.++|+.||++++++++++|||||++|.+.++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6899999999999999999998999999999999999999999
Q ss_pred cccccCCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEc
Q 021352 187 FDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFS 265 (313)
Q Consensus 187 i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~S 265 (313)
+.|+.+.+.++.+.|++||||.. ..+|.+++||.++.||++++++||+++++++||||||++++||+..++++++||||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 99999888899999999999964 78899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCcEEEEEEcCCCceEEEEeecC
Q 021352 266 APNYCYRCGNMASILEVDDCKGHTFIQFEPA 296 (313)
Q Consensus 266 a~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 296 (313)
|++||+.++|.||++.|++++.++|.+|+|.
T Consensus 240 a~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 240 APNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999998899999999999999999999864
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=6e-63 Score=459.69 Aligned_cols=272 Identities=40% Similarity=0.741 Sum_probs=252.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCC--------CceeeeeceecCCC
Q 021352 24 CKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPD--------TNYLFMGDYVDRGY 95 (313)
Q Consensus 24 ~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~--------~~~vfLGD~vDrG~ 95 (313)
...++++++.+||++|+++|++||++++++.+++||||||||+++|.++|+..+.++. .++||||||||||+
T Consensus 18 ~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp 97 (311)
T cd07419 18 RFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGS 97 (311)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCC
Confidence 3568999999999999999999999999999999999999999999999999887643 57999999999999
Q ss_pred CcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCC-----chhHHHHHHHHhcCCceEEEcCcEEEe
Q 021352 96 YSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANVWKIFTDLFDYFPLTALVESEIFCL 170 (313)
Q Consensus 96 ~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~-----~~~~~~~~~~~~~lP~~~~i~~~~~~v 170 (313)
+|+||+.++++++..+|.++++||||||.+.++..+||..++..+|+. ..+|..+.++|+.||++++++++++||
T Consensus 98 ~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~v 177 (311)
T cd07419 98 NSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCM 177 (311)
T ss_pred ChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEE
Confidence 999999999999999999999999999999999999999999888865 358899999999999999999899999
Q ss_pred cCCCCCCccchhhhhcccccc-CCCCCCccccccccCCCCC---CCCCcCC---CCCc--cccCHHHHHHHHHhCCceEE
Q 021352 171 HGGLSPSIETLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDISEQFNHTNNLKLI 241 (313)
Q Consensus 171 HgGi~p~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp~~~---~~~~~~~---r~~~--~~fg~~~~~~fl~~~~~~~i 241 (313)
|||++|.+.++++++.+.|+. ..+.++.+.|++||||... .+|.+++ ||.| +.||++++++||+++|+++|
T Consensus 178 HgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~i 257 (311)
T cd07419 178 HGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMI 257 (311)
T ss_pred ccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEE
Confidence 999999999999999999987 4455678999999999863 4666655 9888 79999999999999999999
Q ss_pred EeeccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeec
Q 021352 242 ARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEP 295 (313)
Q Consensus 242 VrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 295 (313)
|||||++++||...++++++||||||+||+.++|.||++.|+++..+.|++++|
T Consensus 258 iRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 258 IRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999999999999999999999999999999999999999999987
No 15
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.2e-62 Score=460.97 Aligned_cols=290 Identities=37% Similarity=0.606 Sum_probs=258.6
Q ss_pred CcccHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccC----CCceeeccCCCCHHHHHHHHHH
Q 021352 10 SHGNLDEQIAQLMQC----------KPLSEQEVRVLCEKAKEILMDESNVQPVK----SPVTICGDIHGQFHDLAELFRI 75 (313)
Q Consensus 10 ~~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~~~~l~~e~~~~~~~----~~i~viGDiHG~~~~l~~il~~ 75 (313)
+...++.|++.++.. ..++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 455688899988655 45899999999999999999999999887 8999999999999999999999
Q ss_pred cCCCCC-CceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCC--chhHHHHHH
Q 021352 76 GGKCPD-TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTD 152 (313)
Q Consensus 76 ~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~ 152 (313)
.+.++. +++||||||||||++|+||+.+++.++..+|.++++||||||.+.++..+||..++..+|+. ..+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 998765 45999999999999999999999999999999999999999999999999999999999975 368999999
Q ss_pred HHhcCCceEEEcCcEEEecCCCC---------------------------CCccchhhhhcccccc-CCCCCC---cccc
Q 021352 153 LFDYFPLTALVESEIFCLHGGLS---------------------------PSIETLDNIRNFDRVQ-EVPHEG---PMCD 201 (313)
Q Consensus 153 ~~~~lP~~~~i~~~~~~vHgGi~---------------------------p~~~~~~~i~~i~r~~-~~~~~~---~~~d 201 (313)
||++||++++++++++||||||+ |.+.++++++.++|+. +.|..+ +++|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 99999999999989999999994 3456788899898863 555444 4789
Q ss_pred ccccCCCCCCCCCcC-CCCCccccCHHHHHHHHHhCCceEEEeeccc------------cccceEEecC---CeEEEEEc
Q 021352 202 LLWSDPDDRCGWGIS-PRGAGYTFGQDISEQFNHTNNLKLIARAHQL------------VMEGYNWGHE---QKVVTIFS 265 (313)
Q Consensus 202 llWsdp~~~~~~~~~-~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~------------~~~G~~~~~~---~~~iti~S 265 (313)
+|||||....+|..+ +||.|+.||++++++||+++++++||||||+ +++||++.++ ++++||||
T Consensus 248 lLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFS 327 (377)
T cd07418 248 VLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFS 327 (377)
T ss_pred eEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEec
Confidence 999999987777665 7999999999999999999999999999996 6799999886 89999999
Q ss_pred CCCCc------ccCCCcEEEEEEcCC--CceEEEEeecC-CCC
Q 021352 266 APNYC------YRCGNMASILEVDDC--KGHTFIQFEPA-PRR 299 (313)
Q Consensus 266 a~~y~------~~~~n~~avl~i~~~--~~~~~~~~~~~-~~~ 299 (313)
|++|| +.++|.||++.++.+ ...+|.||+.+ |++
T Consensus 328 a~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~ 370 (377)
T cd07418 328 APDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRP 370 (377)
T ss_pred CCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCC
Confidence 99999 578999999999753 57999999988 544
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.4e-61 Score=438.64 Aligned_cols=289 Identities=42% Similarity=0.742 Sum_probs=272.5
Q ss_pred CCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeee
Q 021352 9 NSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMG 88 (313)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLG 88 (313)
.+.++.+-+.+++.+...++++..+.|+.++.++|++|++++++.+||.|+|||||++.+|.++++..|.+..++|+|||
T Consensus 43 ~gkP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLG 122 (517)
T KOG0375|consen 43 TGKPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLG 122 (517)
T ss_pred CCCcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeec
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEE
Q 021352 89 DYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIF 168 (313)
Q Consensus 89 D~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~ 168 (313)
||||||..|+||+.+|.+||+.||+.+++||||||.+.+...+.|..||..+| +..+|+...+.|..||++|+.+..++
T Consensus 123 DYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQfl 201 (517)
T KOG0375|consen 123 DYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFL 201 (517)
T ss_pred cccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceE
Confidence 99999999999999999999999999999999999999999999999999999 68899999999999999999999999
Q ss_pred EecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCC-------CCC-CcCCCCCccccCHHHHHHHHHhCCceE
Q 021352 169 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR-------CGW-GISPRGAGYTFGQDISEQFNHTNNLKL 240 (313)
Q Consensus 169 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~-------~~~-~~~~r~~~~~fg~~~~~~fl~~~~~~~ 240 (313)
|||||++|.+.++++|+.++|..+.|..+++||+||+||.+. .-| .++-||.+|.|...++++||+++++--
T Consensus 202 CVHGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLS 281 (517)
T KOG0375|consen 202 CVHGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLS 281 (517)
T ss_pred EecCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchh
Confidence 999999999999999999999999999999999999999652 122 345699999999999999999999999
Q ss_pred EEeeccccccceEEecC------CeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEeecCCCC
Q 021352 241 IARAHQLVMEGYNWGHE------QKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRR 299 (313)
Q Consensus 241 iVrGH~~~~~G~~~~~~------~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 299 (313)
|||+|+.++.||+.... ..+|||||||||-+.++|+||||..+++ .+.++||+.+|++
T Consensus 282 IiRAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHP 345 (517)
T KOG0375|consen 282 IIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHP 345 (517)
T ss_pred hhhhhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCCCC
Confidence 99999999999987654 3589999999999999999999998665 6899999999987
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-52 Score=385.88 Aligned_cols=296 Identities=31% Similarity=0.594 Sum_probs=261.1
Q ss_pred CCCCCCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----CCCceeeccCCCCHHHHHHHHHHc
Q 021352 1 MSLDSVPSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPV----KSPVTICGDIHGQFHDLAELFRIG 76 (313)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~----~~~i~viGDiHG~~~~l~~il~~~ 76 (313)
+|+|..+. +++.+++.|+..+++.+..++.|+.+|+++|++.|++-++ +..|.||||+||.+++|.-+|.+.
T Consensus 112 ls~Pl~~~----~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKN 187 (631)
T KOG0377|consen 112 LSLPLRKN----HIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKN 187 (631)
T ss_pred cccCcCch----HHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecC
Confidence 35666666 8999999999999999999999999999999999999876 457999999999999999999999
Q ss_pred CCCCCC-ceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCC--chhHHHHHHH
Q 021352 77 GKCPDT-NYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKIFTDL 153 (313)
Q Consensus 77 ~~~~~~-~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~ 153 (313)
|+|..+ -|||-||+||||.+|+|+|..|+++-..+|..+++-|||||..++|-.|||.+|...+|.. ..+.+.+.++
T Consensus 188 GlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leev 267 (631)
T KOG0377|consen 188 GLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEV 267 (631)
T ss_pred CCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHH
Confidence 998755 5999999999999999999999999999999999999999999999999999999999964 5788899999
Q ss_pred HhcCCceEEEcCcEEEecCCCCCCccchhhhhcccccc-----CCCC---------C--------CccccccccCCCCCC
Q 021352 154 FDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQ-----EVPH---------E--------GPMCDLLWSDPDDRC 211 (313)
Q Consensus 154 ~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~-----~~~~---------~--------~~~~dllWsdp~~~~ 211 (313)
|+.||++.+++.++++||||++.. +.++-+.+++|.. ..|. + ....|+|||||....
T Consensus 268 y~WLPi~tiid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~ 346 (631)
T KOG0377|consen 268 YRWLPIGTIIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATM 346 (631)
T ss_pred HHhcchhhhcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCccccc
Confidence 999999999999999999999753 3455555554421 1111 1 135689999998877
Q ss_pred CCCc-CCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEE
Q 021352 212 GWGI-SPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTF 290 (313)
Q Consensus 212 ~~~~-~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~~~~~~ 290 (313)
++.+ .-||.|++||++.+.+||++++++++||+|++.++||++.++++++|||||+||...+.|+||++.+.+.....|
T Consensus 347 GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~Phf 426 (631)
T KOG0377|consen 347 GCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHF 426 (631)
T ss_pred CCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchH
Confidence 7554 469999999999999999999999999999999999999999999999999999878889999999999999999
Q ss_pred EEeecCCCCCC
Q 021352 291 IQFEPAPRRGE 301 (313)
Q Consensus 291 ~~~~~~~~~~~ 301 (313)
+||..+..+..
T Consensus 427 vQY~a~k~t~~ 437 (631)
T KOG0377|consen 427 VQYQAAKQTKR 437 (631)
T ss_pred HHHHhhhhhhh
Confidence 99997665543
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.5e-44 Score=341.21 Aligned_cols=290 Identities=38% Similarity=0.730 Sum_probs=265.7
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----CCCceeeccCCCCHHHHHHHHHHcCCCCC-Cceeeee
Q 021352 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPV----KSPVTICGDIHGQFHDLAELFRIGGKCPD-TNYLFMG 88 (313)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~----~~~i~viGDiHG~~~~l~~il~~~~~~~~-~~~vfLG 88 (313)
...+.+.+.++..++...+-.|+..++.++.+++++++. ..++.++||.||++.++.+++...|.++. ..++|-|
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 455555666778899999999999999999999998765 45799999999999999999999998764 5799999
Q ss_pred ceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEE
Q 021352 89 DYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIF 168 (313)
Q Consensus 89 D~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~ 168 (313)
|++|||..+.|+...+...+..+|++++++|||||...++..|||..++..+|. ...+..+.+.|..||++..++++++
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~~~~~ 328 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLINNKVL 328 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhcCceE
Confidence 999999999999999999999999999999999999999999999999999985 4445555599999999999999999
Q ss_pred EecCCCC-CCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccc
Q 021352 169 CLHGGLS-PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQL 247 (313)
Q Consensus 169 ~vHgGi~-p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~ 247 (313)
.+|||+. ++-..++++++|.|....|+++.+++++|+||....+..++.||.|..||++++++||+.+++++|||||+.
T Consensus 329 ~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~ 408 (476)
T KOG0376|consen 329 VMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEV 408 (476)
T ss_pred EEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhcccc
Confidence 9999996 445679999999999989999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEc-CCCceEEEEeecCCCCCCCCC
Q 021352 248 VMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVD-DCKGHTFIQFEPAPRRGEPDV 304 (313)
Q Consensus 248 ~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~-~~~~~~~~~~~~~~~~~~~~~ 304 (313)
.+.||+..++|+++|+||||+||...+|.||++.++ +++...+.+|++.|++.-+++
T Consensus 409 ~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~~~m 466 (476)
T KOG0376|consen 409 KDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDVKPM 466 (476)
T ss_pred CCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCCCCc
Confidence 999999999999999999999999999999999999 689999999999999876654
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.6e-35 Score=263.57 Aligned_cols=214 Identities=45% Similarity=0.766 Sum_probs=172.9
Q ss_pred eeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHH
Q 021352 57 TICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 136 (313)
Q Consensus 57 ~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e 136 (313)
+|||||||++++|.++|+..+..+.+++|||||++|||+.+.+++.++..++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888999999999999999999999999999877 7889999999999988766554432
Q ss_pred H--------HHHhCCchhHHHHHHHHhcCCceEEEcC-cEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCC
Q 021352 137 C--------LRKYGNANVWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 207 (313)
Q Consensus 137 ~--------~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp 207 (313)
. ...+.....+..+.+|+.++|+++.++. +++|||||++|.....+... ..+.+....+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 1 2233345677888899999999999876 99999999998876544433 2334455688999999
Q ss_pred CCCCCCC-cCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEE
Q 021352 208 DDRCGWG-ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILE 281 (313)
Q Consensus 208 ~~~~~~~-~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~ 281 (313)
.....+. .++++. ++++.+.+++.++.++||+|||++..++.....+++++|||++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 6533322 222232 899999999999999999999999998876678889999999999766666666553
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=2.3e-28 Score=221.04 Aligned_cols=193 Identities=20% Similarity=0.306 Sum_probs=131.9
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCC---------CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKC---------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~---------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (313)
++++||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++. .++++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998863 46789999999999999999999999885 34579999999999
Q ss_pred hhhhhhcC-------ChHHHHHHhCC------chhHHHHHHHHhcCCceEEEc-CcEEEecCCCCCCccchhhhhccccc
Q 021352 125 RQITQVYG-------FYDECLRKYGN------ANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIRNFDRV 190 (313)
Q Consensus 125 ~~~~~~~~-------~~~e~~~~~~~------~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~p~~~~~~~i~~i~r~ 190 (313)
++++...+ ...++...|.. ..+.+.+.+|++++|++..++ ++++|||||+.|....... .
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~-~----- 152 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQD-K----- 152 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccch-h-----
Confidence 88765432 12334444432 235677889999999988774 5799999999876311000 0
Q ss_pred cCCCCCCccccccccCC--------CC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEE
Q 021352 191 QEVPHEGPMCDLLWSDP--------DD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVV 261 (313)
Q Consensus 191 ~~~~~~~~~~dllWsdp--------~~-~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~i 261 (313)
.....++|++- .. ...|..+. .|.+.+|.|||++...... ++.+
T Consensus 153 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~~---~~~i 205 (245)
T PRK13625 153 ------KVQTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRFV---NHTV 205 (245)
T ss_pred ------hhhhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCccceec---CCeE
Confidence 01123345421 11 11222111 2446899999999765533 4579
Q ss_pred EEEcCCCCcccCCCcEEEEEEcCC
Q 021352 262 TIFSAPNYCYRCGNMASILEVDDC 285 (313)
Q Consensus 262 ti~Sa~~y~~~~~n~~avl~i~~~ 285 (313)
.|+|+..| .++. +.+.+++.
T Consensus 206 ~IDtGa~~---gG~L-tal~l~~~ 225 (245)
T PRK13625 206 NIDTGCVF---GGRL-TALRYPEM 225 (245)
T ss_pred EEECcCcc---CCEE-EEEECCCC
Confidence 99988443 3333 44455544
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=1.6e-28 Score=216.86 Aligned_cols=178 Identities=21% Similarity=0.295 Sum_probs=131.6
Q ss_pred eeeccCCCCHHHHHHHHHHcCC--------CCCCceeeeeceecCCCCcHHHHHHHHHhhhh---CCCcEEEEcCCcchh
Q 021352 57 TICGDIHGQFHDLAELFRIGGK--------CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVR---YPQRITILRGNHESR 125 (313)
Q Consensus 57 ~viGDiHG~~~~l~~il~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~---~p~~v~~lrGNHE~~ 125 (313)
+||||||||+++|.++|+.++. .+.+.+|++||+|||||++.+|++++++++.. .|.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998875 35788999999999999999999999999754 456899999999999
Q ss_pred hhhhhcCChH-HHHHHhC--------CchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhccccccCCCCC
Q 021352 126 QITQVYGFYD-ECLRKYG--------NANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE 196 (313)
Q Consensus 126 ~~~~~~~~~~-e~~~~~~--------~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 196 (313)
.++..+.+.. ....... .......+.+|++++|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 8865433221 1111110 0112245689999999998876 79999999833
Q ss_pred CccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCC
Q 021352 197 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPN 268 (313)
Q Consensus 197 ~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~ 268 (313)
+|++.-... .. ...-+...+.++++.++.+++|+|||+++.+....+++++++|+++.+
T Consensus 140 ------~w~r~y~~~----~~---~~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~ 198 (208)
T cd07425 140 ------LWYRGYSKE----TS---DKECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMS 198 (208)
T ss_pred ------HHhhHhhhh----hh---hccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCcc
Confidence 233210000 00 000012467888999999999999999998876688999999998654
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.95 E-value=5.5e-27 Score=210.69 Aligned_cols=201 Identities=19% Similarity=0.327 Sum_probs=131.1
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCCC----------CCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcc
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKCP----------DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHE 123 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~~----------~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (313)
+||.||||||||+++|.++|+.+++.+ .+++|||||||||||+|.+|+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999987653 468999999999999999999999998654 46999999999
Q ss_pred hhhhhhhcCC-------hHHHHHHhC--CchhHHHHHHHHhcCCceEEEc-CcEEEecCCCCCCccchhhhhccccccCC
Q 021352 124 SRQITQVYGF-------YDECLRKYG--NANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIRNFDRVQEV 193 (313)
Q Consensus 124 ~~~~~~~~~~-------~~e~~~~~~--~~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~p~~~~~~~i~~i~r~~~~ 193 (313)
.++++...+. ..++...+. ...+.+...+||++||+...++ ++++|||||+++.......
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~---------- 148 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDS---------- 148 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccc----------
Confidence 9887653221 122333332 2345677889999999988775 4799999998765321110
Q ss_pred CCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHH-HhCCceEEEeeccccccceEEecCCeEEEEEcCCCCccc
Q 021352 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN-HTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYR 272 (313)
Q Consensus 194 ~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl-~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~ 272 (313)
.......+|.+.... . ..-+. + ....+. ...+.+.+|.|||+++..... +..+.|++++-|
T Consensus 149 --~~~~~~~~~~~~~~~--~--~~~~~---~---~~~~~~~~~~~~~~vv~GHt~~~~~~~~---~~~i~IDtGav~--- 210 (234)
T cd07423 149 --KRVRSFALYGDTTGE--T--DEFGL---P---VRRDWAKEYRGDALVVYGHTPVPEPRWL---NNTINIDTGCVF--- 210 (234)
T ss_pred --hhheeeeecccccCC--c--CCCCC---c---cchhhHhhCCCCeEEEECCCCCccceEe---CCEEEEECCCCC---
Confidence 001112244332100 0 00000 0 000011 123567899999999765433 347899988655
Q ss_pred CCCcEEEEEEcCC
Q 021352 273 CGNMASILEVDDC 285 (313)
Q Consensus 273 ~~n~~avl~i~~~ 285 (313)
.++.+|+ .+++.
T Consensus 211 gG~Lt~l-~~~~~ 222 (234)
T cd07423 211 GGKLTAL-RYPER 222 (234)
T ss_pred CCcceEE-ECCCC
Confidence 3444444 44543
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.95 E-value=2.3e-27 Score=217.10 Aligned_cols=218 Identities=19% Similarity=0.289 Sum_probs=143.1
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcC
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
|+++||||||||+++|.++|+++++. ..+.++||||+|||||+|.+|++++.++. .++++|+||||.++++..++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999864 56789999999999999999999999873 46999999999988776555
Q ss_pred Ch----HHHHHHhCCchhHHHHHHHHhcCCceEEE-cCcEEEecCCCCCCccchhhhhccccc---cCCCCC-Ccccccc
Q 021352 133 FY----DECLRKYGNANVWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLDNIRNFDRV---QEVPHE-GPMCDLL 203 (313)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~~~vHgGi~p~~~~~~~i~~i~r~---~~~~~~-~~~~dll 203 (313)
.. .....++......+.+.+|++++|+...+ ++++++||||++|.+...+.+...... ...+.. ..+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 32 12333333344566788999999998876 568999999999987543333222111 111111 1233444
Q ss_pred ccCCCCCCCCCcCCCCCc-cccCHHHH--HHHHHhC-----------------------------CceEEEeeccccccc
Q 021352 204 WSDPDDRCGWGISPRGAG-YTFGQDIS--EQFNHTN-----------------------------NLKLIARAHQLVMEG 251 (313)
Q Consensus 204 Wsdp~~~~~~~~~~r~~~-~~fg~~~~--~~fl~~~-----------------------------~~~~iVrGH~~~~~G 251 (313)
|+.|. .|...-.+.. +.+.-.++ .+||... .-..||.||.....|
T Consensus 157 ~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 157 GNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 44442 2332222211 11111111 1112211 234799999999878
Q ss_pred eEEecCCeEEEEEcCCCCcccCCCcEEEEEEcC
Q 021352 252 YNWGHEQKVVTIFSAPNYCYRCGNMASILEVDD 284 (313)
Q Consensus 252 ~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~ 284 (313)
... ...++.++|+ |.. ++.=+.|.+++
T Consensus 234 ~~~--~~~~~~LDtG---cvw-gg~Lta~~l~~ 260 (275)
T PRK00166 234 LTT--PPNIIALDTG---CVW-GGKLTALRLED 260 (275)
T ss_pred ccC--CCCeEEeecc---ccc-CCeEEEEEeCC
Confidence 765 5679999987 433 33335567763
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.95 E-value=5.1e-27 Score=209.23 Aligned_cols=116 Identities=24% Similarity=0.372 Sum_probs=92.7
Q ss_pred eeeccCCCCHHHHHHHHHHcCCC--------CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhh
Q 021352 57 TICGDIHGQFHDLAELFRIGGKC--------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQIT 128 (313)
Q Consensus 57 ~viGDiHG~~~~l~~il~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (313)
+||||||||++.|.++|+.+++. +.+++|||||||||||+|.+|+++++++... .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 68999999999999999998764 4678999999999999999999999998643 4799999999998875
Q ss_pred hhcC------Ch-----------HHHHHHhC-CchhHHHHHHHHhcCCceEEEcCcEEEecCCCC
Q 021352 129 QVYG------FY-----------DECLRKYG-NANVWKIFTDLFDYFPLTALVESEIFCLHGGLS 175 (313)
Q Consensus 129 ~~~~------~~-----------~e~~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~ 175 (313)
...+ +. .+..+.++ .........+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 4321 10 12333332 234567789999999998875 58999999975
No 25
>PHA02239 putative protein phosphatase
Probab=99.94 E-value=3.8e-26 Score=204.86 Aligned_cols=175 Identities=21% Similarity=0.311 Sum_probs=126.2
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCC--CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhc
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 131 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (313)
|++++||||||+++.|.++++.+... +.+.+||+|||||||+++.+++..++.+.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987533 468899999999999999999999988754 345799999999998765321
Q ss_pred C----------C----hHHHHHHhCCc------------------------------hhHHHHHHHHhcCCceEEEcCcE
Q 021352 132 G----------F----YDECLRKYGNA------------------------------NVWKIFTDLFDYFPLTALVESEI 167 (313)
Q Consensus 132 ~----------~----~~e~~~~~~~~------------------------------~~~~~~~~~~~~lP~~~~i~~~~ 167 (313)
. | ..+++..|+.. ..+..+.+|+++||+....+ ++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CE
Confidence 1 1 12445566421 12245566999999998854 89
Q ss_pred EEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccc
Q 021352 168 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQL 247 (313)
Q Consensus 168 ~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~ 247 (313)
+|||||+.|... +++. ...+++|.+. | .++. .-+.||.||||
T Consensus 159 ifVHAGi~p~~~-~~~q-------------~~~~llWiR~-----f--~~~~-----------------~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKP-VEEQ-------------TIDQLIWSRD-----F--QPRK-----------------DGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCC-hhhC-------------CHhHeEEecc-----c--CCCC-----------------CCcEEEECCCC
Confidence 999999987754 2221 1367899965 2 1111 12689999999
Q ss_pred cccceEEecCCeEEEEEcCCCC
Q 021352 248 VMEGYNWGHEQKVVTIFSAPNY 269 (313)
Q Consensus 248 ~~~G~~~~~~~~~iti~Sa~~y 269 (313)
+..+.... .++.|.|+++..|
T Consensus 201 ~~~~~~~~-~~~~I~IDtGa~~ 221 (235)
T PHA02239 201 TDSGEVEI-NGDMLMCDVGAVF 221 (235)
T ss_pred CCCCcccc-cCCEEEeecCccc
Confidence 97654333 2457999987544
No 26
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.94 E-value=5.8e-26 Score=206.62 Aligned_cols=197 Identities=18% Similarity=0.264 Sum_probs=136.6
Q ss_pred CceeeccCCCCHHHHHHHHHHcCCC------CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCC-cEEEEcCCcchhhh
Q 021352 55 PVTICGDIHGQFHDLAELFRIGGKC------PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQ-RITILRGNHESRQI 127 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~il~~~~~~------~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~-~v~~lrGNHE~~~~ 127 (313)
++++||||||+++.|.++|+.+... ..+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999865421 2456999999999999999999999999988875 68899999998765
Q ss_pred hhhcC-----------------------------------------C----------------------hHHHHHHhCCc
Q 021352 128 TQVYG-----------------------------------------F----------------------YDECLRKYGNA 144 (313)
Q Consensus 128 ~~~~~-----------------------------------------~----------------------~~e~~~~~~~~ 144 (313)
..... | ..+++.+||-+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43211 0 12445556532
Q ss_pred --------hhHHHHHHHHhcCCceEEEcCcE-------------EEecCCCCCCccchhhhhccc-cccCCCCCCccccc
Q 021352 145 --------NVWKIFTDLFDYFPLTALVESEI-------------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCDL 202 (313)
Q Consensus 145 --------~~~~~~~~~~~~lP~~~~i~~~~-------------~~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~dl 202 (313)
.+.+...+|+++||.....+ ++ +|||||+.|..+-.+|.+.+. +-...| ..++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----cccc
Confidence 23456788999999988754 66 999999999987666665432 111222 2478
Q ss_pred cccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEE
Q 021352 203 LWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEV 282 (313)
Q Consensus 203 lWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i 282 (313)
+|.+... ...++... ..-.+||.||+.. ....+.-|.|+++..|. +...|++.+
T Consensus 238 l~~R~~f----~~~~~~~~--------------~~~~~VVhGHt~~-----~~~~~~Ri~iDtGa~~~---~~l~aa~vl 291 (304)
T cd07421 238 LSGRKNV----WNIPQELA--------------DKKTIVVSGHHGK-----LHIDGLRLIIDEGGGFD---DRPIAAIVL 291 (304)
T ss_pred cccchhh----hcCccccc--------------CCCeEEEECCCCC-----ceecCCEEEEECCCCcC---CceeEEEEe
Confidence 8886522 11222110 0126999999932 23456678899886663 444555555
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.94 E-value=4.1e-26 Score=202.96 Aligned_cols=179 Identities=17% Similarity=0.164 Sum_probs=120.8
Q ss_pred CCCceeeccCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhc
Q 021352 53 KSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 131 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (313)
.+|++||||||||+++|.++|+.+++. ..++++||||+|||||+|.+|++++.+. ++++|+||||.+.++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 469999999999999999999999876 5788999999999999999999998652 478999999999886532
Q ss_pred CChHHHHH--------HhCC--chhHHHHHHHHhcCCceEEE---cCcEEEecCCCCCCccchhhhhccccccCCCCCCc
Q 021352 132 GFYDECLR--------KYGN--ANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198 (313)
Q Consensus 132 ~~~~e~~~--------~~~~--~~~~~~~~~~~~~lP~~~~i---~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~ 198 (313)
+....... +... ......+.+|+++||+...+ ++++++||||++.... +.. .+ ..
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~~--~~~----~~------~~ 157 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADVY--EWQ----KD------VD 157 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCch--hhh----cc------CC
Confidence 21100111 1111 12345667899999998765 3569999999743211 000 00 01
Q ss_pred cccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCC
Q 021352 199 MCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNY 269 (313)
Q Consensus 199 ~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y 269 (313)
..+++|+++.....+. .+ ...+.+.||.|||+++.... .+..+.|++++-|
T Consensus 158 ~~~~~w~r~~~~~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 158 LHQVLWSRSRLGERQK--GQ---------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred ccceEEcChhhhhccc--cc---------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 2456887542111100 00 11245689999999976543 2447999988655
No 28
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.93 E-value=7.7e-26 Score=204.99 Aligned_cols=121 Identities=25% Similarity=0.339 Sum_probs=100.5
Q ss_pred ceeeccCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCCh
Q 021352 56 VTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 134 (313)
Q Consensus 56 i~viGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (313)
++||||||||+++|+++|+++++. +.++++|+||+|||||+|.||++++++++ .++++|+||||.+.++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999875 57889999999999999999999999986 4699999999999887655532
Q ss_pred ----HHHHHHhCCchhHHHHHHHHhcCCceEEEcC-cEEEecCCCCCCccc
Q 021352 135 ----DECLRKYGNANVWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIET 180 (313)
Q Consensus 135 ----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~~~vHgGi~p~~~~ 180 (313)
.+...++......+.+.+|++++|+...+++ ++++||||++|.+..
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~ 127 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSI 127 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCH
Confidence 1223333334455788999999999988764 799999999998753
No 29
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.93 E-value=6.8e-26 Score=205.87 Aligned_cols=123 Identities=22% Similarity=0.320 Sum_probs=101.8
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcC
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
|+++||||||||+++|.++|+++++. ..++++|+||+|||||+|++|++++.++. .++++|+||||.+.++...+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 46899999999999999999999875 46889999999999999999999999875 45889999999999887666
Q ss_pred Ch----HHHHHHhCCchhHHHHHHHHhcCCceEEEc-CcEEEecCCCCCCccc
Q 021352 133 FY----DECLRKYGNANVWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIET 180 (313)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~p~~~~ 180 (313)
+. ......+......+.+.+|++++|+..... .++++||||++|.+..
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l 129 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDL 129 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcH
Confidence 42 123333334556788899999999987654 3699999999999853
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.93 E-value=8.7e-25 Score=192.85 Aligned_cols=190 Identities=20% Similarity=0.281 Sum_probs=127.3
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcC
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
+||++||||||++.+|.++++..+.. ..+.++++||++|||+++.++++++.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998764 467889999999999999999998875 25899999999998875433
Q ss_pred --ChHHHHHHhCCc--------hhHHHHHHHHhcCCceEEEc---CcEEEecCCCCCCccchhhhhccccccCCCCCCcc
Q 021352 133 --FYDECLRKYGNA--------NVWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPM 199 (313)
Q Consensus 133 --~~~e~~~~~~~~--------~~~~~~~~~~~~lP~~~~i~---~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 199 (313)
...+.....+.. ...+...+||++||+...++ .++++||||+++... ..... + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 122222333221 24556788999999998764 369999999865431 11000 0 11122234
Q ss_pred ccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCcccCCCcEEE
Q 021352 200 CDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASI 279 (313)
Q Consensus 200 ~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~av 279 (313)
.+++|+++....... ....+.+.||.|||+++..+.. +..+.|++++-+ .++.+|+
T Consensus 149 ~~~~w~~~~~~~~~~------------------~~~~~~~~iV~GHTh~~~~~~~---~~~i~ID~Gsv~---gg~Lt~~ 204 (207)
T cd07424 149 EELLWSRTRIQKAQT------------------QPIKGVDAVVHGHTPVKRPLRL---GNVLYIDTGAVF---DGNLTLL 204 (207)
T ss_pred eeeeeccchhhhcCc------------------cccCCCCEEEECCCCCCcceEE---CCEEEEECCCCC---CCeEEEE
Confidence 668898652211100 0011347899999999865543 336778877443 3445554
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.90 E-value=3.4e-23 Score=184.12 Aligned_cols=180 Identities=17% Similarity=0.173 Sum_probs=116.1
Q ss_pred CCCceeeccCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhc
Q 021352 53 KSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVY 131 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (313)
..|++||||||||+++|+++|+.+.+. ..++++|+||+|||||+|.+|+.++.+ .+++.|+||||.+++....
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFE 87 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHh
Confidence 358999999999999999999998754 467899999999999999999998864 2588999999998876432
Q ss_pred CChHHHH--------HHhCCc--hhHHHHHHHHhcCCceEEEc---CcEEEecCCCCCCccchhhhhccccccCCCCCCc
Q 021352 132 GFYDECL--------RKYGNA--NVWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198 (313)
Q Consensus 132 ~~~~e~~--------~~~~~~--~~~~~~~~~~~~lP~~~~i~---~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~ 198 (313)
.-..... .+.... .......+|+++||+...+. .++++||||++... ..... ...
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~~--~~~~~----------~~~ 155 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPGDE--YDFGK----------EIA 155 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCch--hhhcc----------ccc
Confidence 1000011 111000 12234456999999988663 46999999984321 00000 001
Q ss_pred cccccccCCCCCCCCCcCCCCCccccCHHHHHHHH-HhCCceEEEeeccccccceEEecCCeEEEEEcCCCC
Q 021352 199 MCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN-HTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNY 269 (313)
Q Consensus 199 ~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl-~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y 269 (313)
..+++|.++.....+. .+. ...+.++||.|||+.+.-... ++ .+.|++++.|
T Consensus 156 ~~~~~w~r~~~~~~~~----------------~~~~~~~~~~~vv~GHTh~~~~~~~--~~-~i~IDtGs~~ 208 (218)
T PRK09968 156 ESELLWPVDRVQKSLN----------------GELQQINGADYFIFGHMMFDNIQTF--AN-QIYIDTGSPK 208 (218)
T ss_pred hhhceeCcHHHhhCcc----------------ccccccCCCCEEEECCCCcCcceeE--CC-EEEEECCCCC
Confidence 2345786432111110 011 123568999999998743322 23 6888987644
No 32
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.50 E-value=5.7e-13 Score=111.73 Aligned_cols=82 Identities=24% Similarity=0.402 Sum_probs=61.8
Q ss_pred CceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCCh
Q 021352 55 PVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 134 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (313)
||.++||+||+...+.++++.+.. .+.++++||++++++.+. ++. ...+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCcCC-------
Confidence 588999999999999999998754 678999999999998655 111 2359999999997532
Q ss_pred HHHHHHhCCchhHHHHHHHHhcCCceEEE---cCcEEEecCCC
Q 021352 135 DECLRKYGNANVWKIFTDLFDYFPLTALV---ESEIFCLHGGL 174 (313)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~~~vHgGi 174 (313)
+..+|....+ +.+++++||..
T Consensus 62 -------------------~~~~p~~~~~~~~g~~i~v~Hg~~ 85 (155)
T cd00841 62 -------------------FPILPEEAVLEIGGKRIFLTHGHL 85 (155)
T ss_pred -------------------cccCCceEEEEECCEEEEEECCcc
Confidence 3455644433 23699999954
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.49 E-value=2.1e-13 Score=112.52 Aligned_cols=160 Identities=19% Similarity=0.198 Sum_probs=100.3
Q ss_pred CCceeeccCCCCHHHH----HHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHH--HHhhhhCCCcEEEEcCCcchhhh
Q 021352 54 SPVTICGDIHGQFHDL----AELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLL--VSLKVRYPQRITILRGNHESRQI 127 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l----~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~lk~~~p~~v~~lrGNHE~~~~ 127 (313)
+||++|||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4799999999999987 44444444566788889999999999887766654 44444555679999999999865
Q ss_pred hhhcCChHHHHHH---------------------------------hCCchhHHHHHHHHhcCCceEEEcCcEEEecCCC
Q 021352 128 TQVYGFYDECLRK---------------------------------YGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL 174 (313)
Q Consensus 128 ~~~~~~~~e~~~~---------------------------------~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi 174 (313)
............. ............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 4422211111100 0000111222223333333344455799999987
Q ss_pred CCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeecccc
Q 021352 175 SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 248 (313)
Q Consensus 175 ~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~ 248 (313)
.+........ .........+..++++.++++++.||++.
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 6543211100 12235567889999999999999999985
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.47 E-value=1.3e-12 Score=112.92 Aligned_cols=69 Identities=19% Similarity=0.301 Sum_probs=56.3
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCC--------cHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYY--------SVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
|||.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++..+..+. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 5899999999999999999998766667889999999999873 456666665542 3599999999975
Q ss_pred h
Q 021352 126 Q 126 (313)
Q Consensus 126 ~ 126 (313)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.44 E-value=2.4e-12 Score=108.58 Aligned_cols=63 Identities=16% Similarity=0.208 Sum_probs=49.8
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCC-CCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
|||.++||+||+..++..+++..... +.+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 57999999999998888777766555 568888999998 457777765543 2499999999973
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.40 E-value=3.4e-12 Score=106.36 Aligned_cols=137 Identities=19% Similarity=0.267 Sum_probs=86.0
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCC
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~ 133 (313)
|||+++||+|++..++.++++.+ ...+.++++||++++ .++++.+... .+++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999988 346778899999993 6677777555 49999999997653322110
Q ss_pred hHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCC
Q 021352 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGW 213 (313)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 213 (313)
.. +....... .-+.+++++||.....
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 00 11111111 1145799999954320
Q ss_pred CcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcC
Q 021352 214 GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSA 266 (313)
Q Consensus 214 ~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa 266 (313)
..+.+.+.+.+...+.++++.||++.+.-.. ..+..+++.-|.
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~ 137 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSI 137 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GS
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcC
Confidence 1234456677778899999999999864433 334445554443
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.29 E-value=2.3e-11 Score=99.87 Aligned_cols=118 Identities=19% Similarity=0.176 Sum_probs=78.4
Q ss_pred CceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcH--HHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcC
Q 021352 55 PVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSV--ETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
+|.++||+||++. .....+.+.++++||+++++.... +.+.++..++ . ..+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 5899999999987 123345677889999999886432 2444444432 1 236789999996411
Q ss_pred ChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCC
Q 021352 133 FYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCG 212 (313)
Q Consensus 133 ~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~ 212 (313)
.-+.+++++||.+.+... ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~----------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLD----------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCcc----------------------cccc-------
Confidence 114579999994321100 0000
Q ss_pred CCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021352 213 WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253 (313)
Q Consensus 213 ~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~ 253 (313)
....|.+.+.+++++.+.++++.||++.+.|+.
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123456778888899999999999999988776
No 38
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.24 E-value=4.9e-10 Score=99.91 Aligned_cols=71 Identities=11% Similarity=0.169 Sum_probs=58.9
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
++|.++||+||++..+.++++.....+.+.+|++||++++|+..-++..++..+.... ..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 6799999999999999999997765667889999999999977777777776665432 3499999999985
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.23 E-value=1.9e-10 Score=102.96 Aligned_cols=157 Identities=20% Similarity=0.223 Sum_probs=97.0
Q ss_pred CceeeccCCCCHHHHH-HHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhh----
Q 021352 55 PVTICGDIHGQFHDLA-ELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQ---- 129 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~-~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~---- 129 (313)
||+++|||||++.... +.++ ....+.++++||+++. +.+++..+.++. ..+++++||||.+....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~---~~~pD~Vl~~GDi~~~---~~~~~~~l~~l~----~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH---LLQPDLVLFVGDFGNE---SVQLVRAISSLP----LPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh---ccCCCEEEECCCCCcC---hHHHHHHHHhCC----CCeEEEcCCCcccccccccch
Confidence 6899999999987642 2333 3345788899999864 567777666552 34899999999765320
Q ss_pred ----------------h----------------cCC--------h-HHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEE
Q 021352 130 ----------------V----------------YGF--------Y-DECLRKYGNANVWKIFTDLFDYFPLTALVESEIF 168 (313)
Q Consensus 130 ----------------~----------------~~~--------~-~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~ 168 (313)
. .+| . .++...|+....++.+...++.++.+.....+++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 000 0 1455556656677777788888863333344799
Q ss_pred EecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCC----ceEEEee
Q 021352 169 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNN----LKLIARA 244 (313)
Q Consensus 169 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~----~~~iVrG 244 (313)
+.|+++.-.....++ .| ...|.+. +..+|...+.+.+++.. .++++.|
T Consensus 152 iaH~~~~G~g~~~~~---------------~c---------g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 152 LAHNGPSGLGSDAED---------------PC---------GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred EeCcCCcCCCccccc---------------cc---------ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 999997533211000 01 1123221 22466666655555543 7999999
Q ss_pred ccccc
Q 021352 245 HQLVM 249 (313)
Q Consensus 245 H~~~~ 249 (313)
|.+..
T Consensus 204 H~H~~ 208 (238)
T cd07397 204 HMHHR 208 (238)
T ss_pred CccCc
Confidence 99976
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.20 E-value=5.7e-10 Score=96.21 Aligned_cols=126 Identities=19% Similarity=0.267 Sum_probs=81.1
Q ss_pred CceeeccCC-CCHH-----HHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhh
Q 021352 55 PVTICGDIH-GQFH-----DLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQIT 128 (313)
Q Consensus 55 ~i~viGDiH-G~~~-----~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (313)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+. ..++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 478999999 6533 34455433 44678889999987 57777776653 24899999999631
Q ss_pred hhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEE---cCcEEEecCCCCCCccchhhhhccccccCCCCCCcccccccc
Q 021352 129 QVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWS 205 (313)
Q Consensus 129 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWs 205 (313)
.+|....+ +.+++++||-.-.. |
T Consensus 67 ---------------------------~lp~~~~~~~~g~~i~l~HG~~~~~--------------------------~- 92 (178)
T cd07394 67 ---------------------------NYPETKVITVGQFKIGLIHGHQVVP--------------------------W- 92 (178)
T ss_pred ---------------------------cCCCcEEEEECCEEEEEEECCcCCC--------------------------C-
Confidence 34444333 34799999932000 0
Q ss_pred CCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCC
Q 021352 206 DPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAP 267 (313)
Q Consensus 206 dp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~ 267 (313)
...+.+.++.+..+.++++.|||+.+.- ....+..+++--|.+
T Consensus 93 ------------------~~~~~~~~~~~~~~~dvii~GHTH~p~~-~~~~g~~viNPGSv~ 135 (178)
T cd07394 93 ------------------GDPDSLAALQRQLDVDILISGHTHKFEA-FEHEGKFFINPGSAT 135 (178)
T ss_pred ------------------CCHHHHHHHHHhcCCCEEEECCCCcceE-EEECCEEEEECCCCC
Confidence 0133455666778889999999998743 233344555655553
No 41
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.11 E-value=6.6e-10 Score=95.38 Aligned_cols=65 Identities=20% Similarity=0.298 Sum_probs=46.6
Q ss_pred ceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCc-HHHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 021352 56 VTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-VETVTLLVSLKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 56 i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (313)
|.++||+||++..+.. ......+.+.+|++||++++|... .+.+..+..+ +..+++++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHH
Confidence 5789999999998887 333344567888999999998753 3333333322 345999999999754
No 42
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.97 E-value=2.2e-08 Score=90.38 Aligned_cols=209 Identities=14% Similarity=0.140 Sum_probs=107.0
Q ss_pred CCceeeccCCCC------HHHHHHHHHHcCCCCCCceeeeeceecC--C-----CCcHHHHHHHHHhhhhCCCcEEEEcC
Q 021352 54 SPVTICGDIHGQ------FHDLAELFRIGGKCPDTNYLFMGDYVDR--G-----YYSVETVTLLVSLKVRYPQRITILRG 120 (313)
Q Consensus 54 ~~i~viGDiHG~------~~~l~~il~~~~~~~~~~~vfLGD~vDr--G-----~~s~evl~~l~~lk~~~p~~v~~lrG 120 (313)
|++++|||+|.. ...+.+.|+.. ....+.++++||++|. | +...+++..+..+... +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 589999999954 22455555432 2345778899999985 2 2345677777777643 235999999
Q ss_pred CcchhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCC--ceEEE-cCcEEEecCCCCCCc-cchhhhhcccc-c-----
Q 021352 121 NHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFP--LTALV-ESEIFCLHGGLSPSI-ETLDNIRNFDR-V----- 190 (313)
Q Consensus 121 NHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP--~~~~i-~~~~~~vHgGi~p~~-~~~~~i~~i~r-~----- 190 (313)
|||..... ...+..+. ..+| ....+ +.+++++||-..+.. ......+.+-| +
T Consensus 79 NHD~~~~~-------~~~~~~g~-----------~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~ 140 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-----------TLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWL 140 (241)
T ss_pred CCchhhhH-------HHHHhCCC-----------EEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHH
Confidence 99974321 11111111 1122 22223 346999999765321 11111222111 0
Q ss_pred -cCCCCCCccccccccCCCCCCCCC-c-CCCCC-ccccCHHHHHHHHHhCCceEEEeeccccccceEEecCC---eEEEE
Q 021352 191 -QEVPHEGPMCDLLWSDPDDRCGWG-I-SPRGA-GYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQ---KVVTI 263 (313)
Q Consensus 191 -~~~~~~~~~~dllWsdp~~~~~~~-~-~~r~~-~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~---~~iti 263 (313)
...|. ...+|--+.-..... . ..+.. -....+..+.+.+++.+.+++|.||++.+.-.....++ +.+.+
T Consensus 141 ~~~~p~----~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~l 216 (241)
T PRK05340 141 FLALPL----SIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVL 216 (241)
T ss_pred HHhCCH----HHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEe
Confidence 00000 000000000000000 0 00111 12245577888899999999999999987544333332 23333
Q ss_pred EcCCCCcccCCCcEEEEEEcCCCceEEEEee
Q 021352 264 FSAPNYCYRCGNMASILEVDDCKGHTFIQFE 294 (313)
Q Consensus 264 ~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~ 294 (313)
-+. ...+.++.++++ ...+..+.
T Consensus 217 gdw-------~~~~~~~~~~~~-~~~~~~~~ 239 (241)
T PRK05340 217 GDW-------HEQGSVLKVDAD-GVELIPFP 239 (241)
T ss_pred CCC-------CCCCeEEEEECC-ceEEEeCC
Confidence 321 123788888876 35665553
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.94 E-value=8.1e-09 Score=82.06 Aligned_cols=117 Identities=21% Similarity=0.309 Sum_probs=82.1
Q ss_pred eeeccCCCCHHHHHHHH--HHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCCh
Q 021352 57 TICGDIHGQFHDLAELF--RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 134 (313)
Q Consensus 57 ~viGDiHG~~~~l~~il--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (313)
+++||+|+......... ........+.++++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888765 34444556778899999999988776554422222334456999999999
Q ss_pred HHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCC
Q 021352 135 DECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 214 (313)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 214 (313)
++++|+.+.+...... +.
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~--------- 87 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PD--------- 87 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------cc---------
Confidence 8999997643321100 00
Q ss_pred cCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021352 215 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253 (313)
Q Consensus 215 ~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~ 253 (313)
.......+...+...+.+++|.||++....+.
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00145677888888999999999999876544
No 44
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.93 E-value=4e-08 Score=87.15 Aligned_cols=193 Identities=17% Similarity=0.125 Sum_probs=102.6
Q ss_pred CceeeccCCC----CHHHHH----HHHHHcCCCCCCceeeeeceecCCCCcHH---HHHHHHHhhhhCCCcEEEEcCCcc
Q 021352 55 PVTICGDIHG----QFHDLA----ELFRIGGKCPDTNYLFMGDYVDRGYYSVE---TVTLLVSLKVRYPQRITILRGNHE 123 (313)
Q Consensus 55 ~i~viGDiHG----~~~~l~----~il~~~~~~~~~~~vfLGD~vDrG~~s~e---vl~~l~~lk~~~p~~v~~lrGNHE 123 (313)
+++++||+|- ....+. .+.+.......+.+|++||+++.+....+ ....+..|.. .+--++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 5889999995 223333 33344333445778899999999984332 2333333331 1223889999999
Q ss_pred hhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhccccccCCCCCCcccccc
Q 021352 124 SRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL 203 (313)
Q Consensus 124 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 203 (313)
... ...+. ......+.+.+.++..|- ..-++++|-=+.+...
T Consensus 81 ~~~-~ld~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~------------------------ 122 (214)
T cd07399 81 LVL-ALEFG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS------------------------ 122 (214)
T ss_pred chh-hCCCC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC------------------------
Confidence 432 11111 012233444455554331 1247888884322110
Q ss_pred ccCCCCCCCCCcCCCCCccccCHHHHHHHHHhC-CceEEEeeccccccceEEe----c-CCeEEEEEcCCCCcccCCCcE
Q 021352 204 WSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN-NLKLIARAHQLVMEGYNWG----H-EQKVVTIFSAPNYCYRCGNMA 277 (313)
Q Consensus 204 Wsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~-~~~~iVrGH~~~~~G~~~~----~-~~~~iti~Sa~~y~~~~~n~~ 277 (313)
|.+. ...| .....+.+.+.++++++ ++++++.||.+... .... . ++.+..+.+........+|..
T Consensus 123 ~~~~--~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~-~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 123 RPDS--IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAG-RTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred cCcc--cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCCc-eEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 1000 0001 01123445677889888 79999999998653 2222 1 333444443322211223332
Q ss_pred -EEEEEcCC-CceEEEEeec
Q 021352 278 -SILEVDDC-KGHTFIQFEP 295 (313)
Q Consensus 278 -avl~i~~~-~~~~~~~~~~ 295 (313)
.++.++++ ..+.+++|.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 68888875 5788888876
No 45
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.92 E-value=3.3e-08 Score=84.58 Aligned_cols=161 Identities=17% Similarity=0.124 Sum_probs=99.6
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCC
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~ 133 (313)
++|.|+||.||...+..+..+.....+.+.+|.+||++..... ..+.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-----HHhhc---ccccceEEEEccCCCcccc-----
Confidence 6899999999999766666666666677888899999876542 11211 0124699999999975322
Q ss_pred hHHHHHHhCCchhHHHHHHHHhcCCce--EEE-cCcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCC
Q 021352 134 YDECLRKYGNANVWKIFTDLFDYFPLT--ALV-ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR 210 (313)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~~~~~lP~~--~~i-~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~ 210 (313)
..+|-. ..+ +-+++++||....-
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~--------------------------------- 94 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFV--------------------------------- 94 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCcccc---------------------------------
Confidence 122222 223 35899999954210
Q ss_pred CCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcC-CCceE
Q 021352 211 CGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMASILEVDD-CKGHT 289 (313)
Q Consensus 211 ~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~-~~~~~ 289 (313)
......+..+.+..+.+.+|.|||+.+.-.+ ..+-.+++=-|.+.+ ..++..+++.++. +.++.
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~-~~~i~~vNPGS~s~p--r~~~~~sy~il~~~~~~~~ 159 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPVAEK-VGGILLVNPGSVSGP--RGGNPASYAILDVDNLEVE 159 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcccEEE-ECCEEEEcCCCcCCC--CCCCCcEEEEEEcCCCEEE
Confidence 1223456677777889999999999875332 222233443444343 2334546666654 45666
Q ss_pred EEEeecC
Q 021352 290 FIQFEPA 296 (313)
Q Consensus 290 ~~~~~~~ 296 (313)
...++..
T Consensus 160 ~~~~~~~ 166 (172)
T COG0622 160 VLFLERD 166 (172)
T ss_pred EEEeecc
Confidence 6666543
No 46
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.88 E-value=4.1e-08 Score=81.02 Aligned_cols=117 Identities=20% Similarity=0.187 Sum_probs=75.7
Q ss_pred ceeeccCCCCHH----------HHHHHHHHcCCCCCCceeeeeceecCCCCc--HHHHHHHHHhhhhCCCcEEEEcCCcc
Q 021352 56 VTICGDIHGQFH----------DLAELFRIGGKCPDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYPQRITILRGNHE 123 (313)
Q Consensus 56 i~viGDiHG~~~----------~l~~il~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE 123 (313)
|+.++|+|=.-. .|.++++.......+.++++||+++.|... .+...++..+.... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 568899993211 122344445455577888999999998742 12344455554321 25999999999
Q ss_pred hhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhccccccCCCCCCcccccc
Q 021352 124 SRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL 203 (313)
Q Consensus 124 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 203 (313)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 7 89999855322100
Q ss_pred ccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021352 204 WSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253 (313)
Q Consensus 204 Wsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~ 253 (313)
|. . .. .+.+.+.+++++.++++++.||++.+....
T Consensus 95 ~~---------~-----~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 GR---------E-----RL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred cc---------c-----cC-CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 00 0 00 156778899999999999999999876554
No 47
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.88 E-value=2.3e-08 Score=81.60 Aligned_cols=107 Identities=19% Similarity=0.111 Sum_probs=74.1
Q ss_pred eeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHH
Q 021352 57 TICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDE 136 (313)
Q Consensus 57 ~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e 136 (313)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998877776654 45668899999973 34555555541 224889999999
Q ss_pred HHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCCcC
Q 021352 137 CLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGIS 216 (313)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 216 (313)
.+++++|+-+.+.. +.+
T Consensus 57 ----------------------------~~Ilv~H~pp~~~~-------------------------~~~---------- 73 (129)
T cd07403 57 ----------------------------VDILLTHAPPAGIG-------------------------DGE---------- 73 (129)
T ss_pred ----------------------------cCEEEECCCCCcCc-------------------------Ccc----------
Confidence 37899998321000 000
Q ss_pred CCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021352 217 PRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253 (313)
Q Consensus 217 ~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~ 253 (313)
+ ....+.+.+.+++++.+.++++.||++.+..+.
T Consensus 74 -~--~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 -D--FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred -c--ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0 012345678888889999999999999887655
No 48
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.86 E-value=9.7e-09 Score=87.06 Aligned_cols=67 Identities=19% Similarity=0.125 Sum_probs=46.6
Q ss_pred ceeeccCCCCHHHHHHHHH-HcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 56 VTICGDIHGQFHDLAELFR-IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 56 i~viGDiHG~~~~l~~il~-~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
+.++||+|++...+...+. .....+.+.++++||+++++....... ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 5789999999887766552 233345567888999999887655443 22222 2334699999999986
No 49
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.81 E-value=1.4e-07 Score=82.76 Aligned_cols=193 Identities=18% Similarity=0.230 Sum_probs=113.8
Q ss_pred CCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeecee--cCCCCcHHHHH-HHHHhhhhCCCcEEEEcCCcchhhhhh
Q 021352 53 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYV--DRGYYSVETVT-LLVSLKVRYPQRITILRGNHESRQITQ 129 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~v--DrG~~s~evl~-~l~~lk~~~p~~v~~lrGNHE~~~~~~ 129 (313)
.+++.+++|+||.++.+.+++..+.....+.+++.||+. +.|+.-.-.-. .+..++.. .-.++.++||.|...+..
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKEL-GIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhc-CCeEEEEcCCCChHHHHH
Confidence 578999999999999999999998877788899999999 88874322211 13344322 235999999999875532
Q ss_pred hc-----------------CChH---------HHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhh
Q 021352 130 VY-----------------GFYD---------ECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDN 183 (313)
Q Consensus 130 ~~-----------------~~~~---------e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~ 183 (313)
.. +|.. ....+|..+.++......++..-- ..+++..|+ ||.-...+
T Consensus 82 ~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~----~~~Il~~Ha--PP~gt~~d- 154 (226)
T COG2129 82 VLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN----PVNILLTHA--PPYGTLLD- 154 (226)
T ss_pred HHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC----cceEEEecC--CCCCcccc-
Confidence 10 0000 000111111222222222221110 001555665 22211110
Q ss_pred hhccccccCCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEE
Q 021352 184 IRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTI 263 (313)
Q Consensus 184 i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti 263 (313)
.+.| -..-|.++++++.++.+-.+.++||-+...|..... ..|-|
T Consensus 155 --------------------------------~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG--~TivV 199 (226)
T COG2129 155 --------------------------------TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIG--NTIVV 199 (226)
T ss_pred --------------------------------CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccC--CeEEE
Confidence 1111 123678999999999999999999999988886543 33333
Q ss_pred EcCCCCcccCCCcEEEEEEcCCCceEEEEe
Q 021352 264 FSAPNYCYRCGNMASILEVDDCKGHTFIQF 293 (313)
Q Consensus 264 ~Sa~~y~~~~~n~~avl~i~~~~~~~~~~~ 293 (313)
.=++ .+..+.|++.+++. .+...+|
T Consensus 200 NPG~----~~~g~yA~i~l~~~-~Vk~~~~ 224 (226)
T COG2129 200 NPGP----LGEGRYALIELEKE-VVKLEQF 224 (226)
T ss_pred CCCC----ccCceEEEEEecCc-EEEEEEe
Confidence 3232 23456799999876 5555555
No 50
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.74 E-value=6.1e-08 Score=85.79 Aligned_cols=70 Identities=21% Similarity=0.187 Sum_probs=53.2
Q ss_pred CCceeeccCCCCHH----HHHHHHHHcCCCCCCceeeeeceecCCCCcH-HHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 54 SPVTICGDIHGQFH----DLAELFRIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~~~----~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
++|+++||+|+... .+.++++.+.....+.++++||++|.+.... .+..++..+... ..++++.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~--~~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAP--LGVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCC--CCEEEECCCcccc
Confidence 67999999998744 6777777665555677888999999987764 566666655433 3499999999975
No 51
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.73 E-value=8.5e-08 Score=88.08 Aligned_cols=71 Identities=20% Similarity=0.171 Sum_probs=53.4
Q ss_pred CCCceeeccCCCC----HHHHHHHHHHcCCCCCCceeeeeceecCC-C-CcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 53 KSPVTICGDIHGQ----FHDLAELFRIGGKCPDTNYLFMGDYVDRG-Y-YSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 53 ~~~i~viGDiHG~----~~~l~~il~~~~~~~~~~~vfLGD~vDrG-~-~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
..+|+++||+|.. ...+.++++.....+.+-++++||++|++ + ...++...+..++...| ++.+.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 4789999999976 55677777776656677888999999954 2 33346666777765444 99999999974
No 52
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.72 E-value=3.5e-08 Score=88.84 Aligned_cols=68 Identities=21% Similarity=0.189 Sum_probs=48.5
Q ss_pred CceeeccCCCCH------HHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 55 PVTICGDIHGQF------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 55 ~i~viGDiHG~~------~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
+|.++||+|.++ ..+.++++.+...+.+.+|++||++++.+.+.+.+..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999763 23566777665555777889999999876555555554442 233599999999964
No 53
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.67 E-value=5.1e-07 Score=89.53 Aligned_cols=72 Identities=15% Similarity=0.207 Sum_probs=51.4
Q ss_pred cCHHHHHHHHHhCCce----EEEeeccccc--cceE-EecCCeEEEEEcCCCCcccCC---CcEEEEEEcCCCceEEEEe
Q 021352 224 FGQDISEQFNHTNNLK----LIARAHQLVM--EGYN-WGHEQKVVTIFSAPNYCYRCG---NMASILEVDDCKGHTFIQF 293 (313)
Q Consensus 224 fg~~~~~~fl~~~~~~----~iVrGH~~~~--~G~~-~~~~~~~iti~Sa~~y~~~~~---n~~avl~i~~~~~~~~~~~ 293 (313)
-.++..+.+|+.+|++ .||.||+||. .|-. +.++|+++.|+.+ +|..+. .-|++=.|.++-....++.
T Consensus 506 ~~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGG--fskAYqk~TGIAGYTLiyNS~gl~L~~H 583 (640)
T PF06874_consen 506 EDEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGG--FSKAYQKTTGIAGYTLIYNSYGLQLVAH 583 (640)
T ss_pred cCHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcCh--hhhhhccccCccceEEEecCCcceeccC
Confidence 3567788999999998 9999999987 5543 3468999999864 222232 2356777777777777776
Q ss_pred ecCC
Q 021352 294 EPAP 297 (313)
Q Consensus 294 ~~~~ 297 (313)
+|=.
T Consensus 584 ~pF~ 587 (640)
T PF06874_consen 584 QPFE 587 (640)
T ss_pred CCCC
Confidence 6644
No 54
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.65 E-value=4e-07 Score=90.59 Aligned_cols=73 Identities=22% Similarity=0.327 Sum_probs=45.2
Q ss_pred cCCCceeeccCC-CCH----HHHHHHHHHcC---------CCCCCceeeeeceecC-CCCc---------------HHHH
Q 021352 52 VKSPVTICGDIH-GQF----HDLAELFRIGG---------KCPDTNYLFMGDYVDR-GYYS---------------VETV 101 (313)
Q Consensus 52 ~~~~i~viGDiH-G~~----~~l~~il~~~~---------~~~~~~~vfLGD~vDr-G~~s---------------~evl 101 (313)
.+.+++++||+| |.- ..+..+++.+. ....+.+|++||++|. |+.+ .++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 346799999999 652 23444444332 2234678899999994 3221 1344
Q ss_pred HHHHHhhhhCCCcEEEEcCCcchhh
Q 021352 102 TLLVSLKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (313)
.+|..+... -.+++++||||...
T Consensus 322 ~~L~~L~~~--i~V~~ipGNHD~~~ 344 (504)
T PRK04036 322 EYLKQIPED--IKIIISPGNHDAVR 344 (504)
T ss_pred HHHHhhhcC--CeEEEecCCCcchh
Confidence 455554322 25999999999764
No 55
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.62 E-value=7.5e-08 Score=86.34 Aligned_cols=68 Identities=10% Similarity=0.122 Sum_probs=44.0
Q ss_pred ceeeccCCCCH------HHHHHHHHHcCCCCCCceeeeeceecCC-----CC--cHHHHHHHHHhhhhCCCcEEEEcCCc
Q 021352 56 VTICGDIHGQF------HDLAELFRIGGKCPDTNYLFMGDYVDRG-----YY--SVETVTLLVSLKVRYPQRITILRGNH 122 (313)
Q Consensus 56 i~viGDiHG~~------~~l~~il~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~lk~~~p~~v~~lrGNH 122 (313)
++++||+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..|+.. +..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999543 234444443322 467788999999952 11 13456666666543 34699999999
Q ss_pred chh
Q 021352 123 ESR 125 (313)
Q Consensus 123 E~~ 125 (313)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 974
No 56
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.61 E-value=1.1e-07 Score=77.67 Aligned_cols=142 Identities=46% Similarity=0.776 Sum_probs=110.4
Q ss_pred hhhcCChHHHHHHhCCchhHHH---HHHHHhcCCceEEEcC-cEEEecCCCCCCc-cchhhhhcccccc--CCCCCCccc
Q 021352 128 TQVYGFYDECLRKYGNANVWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPMC 200 (313)
Q Consensus 128 ~~~~~~~~e~~~~~~~~~~~~~---~~~~~~~lP~~~~i~~-~~~~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~~ 200 (313)
...+++..++...++....|.. ..++|+.+|+.+..+. .++|.|+++++.. ..++.++.+.|.. .....+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 3445566665555543334555 8999999999998887 8999999999865 6677777777766 666777777
Q ss_pred cccccCCCC--CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCc
Q 021352 201 DLLWSDPDD--RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYC 270 (313)
Q Consensus 201 dllWsdp~~--~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~ 270 (313)
+.+|+++.. ...|..+++|.+..+ .+....|......+.+.++|.....++....++..+|.++++++|
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 779998874 688988999988766 667778887777777999999998888777765789999998886
No 57
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.54 E-value=8.6e-06 Score=74.12 Aligned_cols=58 Identities=12% Similarity=0.010 Sum_probs=36.1
Q ss_pred HHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCcccCCCcE-EEEEEcCC
Q 021352 226 QDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGNMA-SILEVDDC 285 (313)
Q Consensus 226 ~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~-avl~i~~~ 285 (313)
.+.+.+.+++++++.+++||++....... ++-...+.+++.++....+.| .++.++++
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~~--~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 253 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGRY--GGLEMVVTSAIGAQLGNDKSGLRIVKVTED 253 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceEE--CCEEEEEcCceecccCCCCCCcEEEEECCC
Confidence 45678888999999999999998765433 332122223333333334445 57778655
No 58
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.54 E-value=4.8e-07 Score=80.94 Aligned_cols=67 Identities=25% Similarity=0.325 Sum_probs=46.3
Q ss_pred CceeeccCCCC------------HHHHHHHHHHcCCC--CCCceeeeeceecCCCCc-H-HHHHHHHHhhhhCCCcEEEE
Q 021352 55 PVTICGDIHGQ------------FHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYS-V-ETVTLLVSLKVRYPQRITIL 118 (313)
Q Consensus 55 ~i~viGDiHG~------------~~~l~~il~~~~~~--~~~~~vfLGD~vDrG~~s-~-evl~~l~~lk~~~p~~v~~l 118 (313)
|++++||+|=. ...+.++++.+... +.+-+|++||+++.|... . .++..+..+ +..++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 58899999944 34677777766543 567788999999987532 1 233333333 3458999
Q ss_pred cCCcchh
Q 021352 119 RGNHESR 125 (313)
Q Consensus 119 rGNHE~~ 125 (313)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 59
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.46 E-value=2.9e-06 Score=74.07 Aligned_cols=70 Identities=16% Similarity=0.083 Sum_probs=43.1
Q ss_pred CCceeeccCCCCHH------------HHHHHHHHcCCCCCCceeeeeceecCCCCc---HHHHHHHHHhhhhCCCcEEEE
Q 021352 54 SPVTICGDIHGQFH------------DLAELFRIGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVSLKVRYPQRITIL 118 (313)
Q Consensus 54 ~~i~viGDiHG~~~------------~l~~il~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~lk~~~p~~v~~l 118 (313)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+.+.....+-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57899999996222 122222223334557788999999977653 444444433222222348899
Q ss_pred cCCcc
Q 021352 119 RGNHE 123 (313)
Q Consensus 119 rGNHE 123 (313)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 60
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.45 E-value=1.5e-05 Score=73.22 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=47.8
Q ss_pred cCCCceeeccCC-C-----------CHHHHHHHHHHcCC--CCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEE
Q 021352 52 VKSPVTICGDIH-G-----------QFHDLAELFRIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITI 117 (313)
Q Consensus 52 ~~~~i~viGDiH-G-----------~~~~l~~il~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~ 117 (313)
...+++.|+|+| . ....|.++++.+.. .+.+-+|+.||+++.|. .+-+..+.+.-...+..++.
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~ 90 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVW 90 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEE
Confidence 347899999999 1 24667788876643 23566888999999874 23232322222233345999
Q ss_pred EcCCcchh
Q 021352 118 LRGNHESR 125 (313)
Q Consensus 118 lrGNHE~~ 125 (313)
++||||..
T Consensus 91 v~GNHD~~ 98 (275)
T PRK11148 91 LPGNHDFQ 98 (275)
T ss_pred eCCCCCCh
Confidence 99999974
No 61
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.42 E-value=2.4e-06 Score=76.65 Aligned_cols=68 Identities=21% Similarity=0.238 Sum_probs=40.6
Q ss_pred ceeeccCCCC---------H-----HHHHHHHHHcCC--CCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEc
Q 021352 56 VTICGDIHGQ---------F-----HDLAELFRIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILR 119 (313)
Q Consensus 56 i~viGDiHG~---------~-----~~l~~il~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lr 119 (313)
|++++|||-. + +-+.++.+.... ++.+-+|+.||++++++.. +....+..++.. |..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~l-~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDAL-PGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHhC-CCCeEEEe
Confidence 5789999955 1 223333333221 3567788899999877532 333333333322 23489999
Q ss_pred CCcchh
Q 021352 120 GNHESR 125 (313)
Q Consensus 120 GNHE~~ 125 (313)
||||..
T Consensus 79 GNHD~~ 84 (232)
T cd07393 79 GNHDYW 84 (232)
T ss_pred CCcccc
Confidence 999973
No 62
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.41 E-value=8e-06 Score=74.78 Aligned_cols=72 Identities=18% Similarity=0.223 Sum_probs=49.3
Q ss_pred CceeeccCC--C-----------CHHHHHHHHHHcCCCCCCceeeeeceecCCCC-cHHHHHHHHHhhhhCCCcEEEEcC
Q 021352 55 PVTICGDIH--G-----------QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVSLKVRYPQRITILRG 120 (313)
Q Consensus 55 ~i~viGDiH--G-----------~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~lk~~~p~~v~~lrG 120 (313)
|+++|||+| . ....+.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24567777777755556778899999998863 223333333333333345999999
Q ss_pred Ccchhh
Q 021352 121 NHESRQ 126 (313)
Q Consensus 121 NHE~~~ 126 (313)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999864
No 63
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.30 E-value=2.2e-06 Score=73.06 Aligned_cols=66 Identities=27% Similarity=0.410 Sum_probs=43.7
Q ss_pred ceeeccCCCCHHHH---------------HHHHHHcC--CCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEE
Q 021352 56 VTICGDIHGQFHDL---------------AELFRIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITIL 118 (313)
Q Consensus 56 i~viGDiHG~~~~l---------------~~il~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~l 118 (313)
+++|||+|=..... .++++... ..+.+.+|++||++++|..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47889999655532 22333322 2356789999999999986543 4444443 3459999
Q ss_pred cCCcchhh
Q 021352 119 RGNHESRQ 126 (313)
Q Consensus 119 rGNHE~~~ 126 (313)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999764
No 64
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.30 E-value=4e-06 Score=74.42 Aligned_cols=200 Identities=16% Similarity=0.146 Sum_probs=101.1
Q ss_pred eeeccCCCC------HHHHHHHHHHcCCCCCCceeeeeceecC--CCC-----cHHHHHHHHHhhhhCCCcEEEEcCCcc
Q 021352 57 TICGDIHGQ------FHDLAELFRIGGKCPDTNYLFMGDYVDR--GYY-----SVETVTLLVSLKVRYPQRITILRGNHE 123 (313)
Q Consensus 57 ~viGDiHG~------~~~l~~il~~~~~~~~~~~vfLGD~vDr--G~~-----s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (313)
+.|||+|=. .+.|.+.|+.... ..+.++++||++|- |.. -.+|...|..+. +.+.+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAA-QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccc-cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchH
Confidence 468999954 3345555554432 45778899999862 222 233555555543 34567999999999
Q ss_pred hhhhhhhcCChHHHHHHhCCchhHHHHHHHHhcCCceEEE---cCcEEEecCCCC-CCccchhhhhccccc-------cC
Q 021352 124 SRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLS-PSIETLDNIRNFDRV-------QE 192 (313)
Q Consensus 124 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~~~vHgGi~-p~~~~~~~i~~i~r~-------~~ 192 (313)
...-+ .+ ....|. +.-+|-...+ +.+++.+||..- +........+...+- ..
T Consensus 79 fll~~-~f------~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lfln 141 (237)
T COG2908 79 FLLGK-RF------AQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLN 141 (237)
T ss_pred HHHHH-HH------HhhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHH
Confidence 54321 11 111221 1122322222 678999999652 111100001100000 00
Q ss_pred CCCC--CccccccccCCCCCCCCCcCCCCCc---cccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCC
Q 021352 193 VPHE--GPMCDLLWSDPDDRCGWGISPRGAG---YTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAP 267 (313)
Q Consensus 193 ~~~~--~~~~dllWsdp~~~~~~~~~~r~~~---~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~ 267 (313)
.|.. .....-+|+.. .|........ ....++.+.+-++++|++.+|+||++.+..-.... ..-|..-+-
T Consensus 142 l~l~~R~ri~~k~r~~s----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~-~~yi~lGdW- 215 (237)
T COG2908 142 LPLRVRRRIAYKIRSLS----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPG-ITYINLGDW- 215 (237)
T ss_pred hHHHHHHHHHHHHHHhh----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCC-ceEEecCcc-
Confidence 0000 00011244422 2322211111 12456677888999999999999999876544322 222222211
Q ss_pred CCcccCCCcEEEEEEcCCCc
Q 021352 268 NYCYRCGNMASILEVDDCKG 287 (313)
Q Consensus 268 ~y~~~~~n~~avl~i~~~~~ 287 (313)
...+++++++++..
T Consensus 216 ------~~~~s~~~v~~~~~ 229 (237)
T COG2908 216 ------VSEGSILEVDDGGL 229 (237)
T ss_pred ------hhcceEEEEecCcE
Confidence 24579999988754
No 65
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.27 E-value=1.2e-06 Score=77.05 Aligned_cols=29 Identities=3% Similarity=-0.058 Sum_probs=22.5
Q ss_pred CHHHHHHHHHhCCceEEEeeccccccceE
Q 021352 225 GQDISEQFNHTNNLKLIARAHQLVMEGYN 253 (313)
Q Consensus 225 g~~~~~~fl~~~~~~~iVrGH~~~~~G~~ 253 (313)
.+..+.+.++..+++++|.||++.+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 34556777888999999999999875443
No 66
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.16 E-value=1.7e-05 Score=66.78 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=30.2
Q ss_pred CCCCCceeeeeceecCCCCcH-HHH-HHHHHhhhh---C-CCcEEEEcCCcchh
Q 021352 78 KCPDTNYLFMGDYVDRGYYSV-ETV-TLLVSLKVR---Y-PQRITILRGNHESR 125 (313)
Q Consensus 78 ~~~~~~~vfLGD~vDrG~~s~-evl-~~l~~lk~~---~-p~~v~~lrGNHE~~ 125 (313)
....+.+|++||++|.+.... +.. ..+..++.. . +-.+++++||||..
T Consensus 36 ~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 36 LLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred hcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 345678999999999876422 222 223333222 1 23599999999974
No 67
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.08 E-value=6.7e-06 Score=74.82 Aligned_cols=72 Identities=22% Similarity=0.255 Sum_probs=49.8
Q ss_pred CCceeeccCCC-C-----------HHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHH----HHHHHHhhhhCCCcEEE
Q 021352 54 SPVTICGDIHG-Q-----------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVSLKVRYPQRITI 117 (313)
Q Consensus 54 ~~i~viGDiHG-~-----------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~lk~~~p~~v~~ 117 (313)
|+++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+. ..++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 23455555555445567788999999998655443 34555555443345999
Q ss_pred EcCCcchh
Q 021352 118 LRGNHESR 125 (313)
Q Consensus 118 lrGNHE~~ 125 (313)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 68
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.04 E-value=4.3e-05 Score=69.59 Aligned_cols=71 Identities=21% Similarity=0.078 Sum_probs=42.6
Q ss_pred ceeeccCCCCHH------HH-HHHHHHcCCCCCCceeeeeceecCCCCc-------HHHH-HHHHHhh---hhCCCcEEE
Q 021352 56 VTICGDIHGQFH------DL-AELFRIGGKCPDTNYLFMGDYVDRGYYS-------VETV-TLLVSLK---VRYPQRITI 117 (313)
Q Consensus 56 i~viGDiHG~~~------~l-~~il~~~~~~~~~~~vfLGD~vDrG~~s-------~evl-~~l~~lk---~~~p~~v~~ 117 (313)
++.++|+|-... .. ..+++.+.....+.+|++||++|++... .+-. .++..++ ...+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 578999996222 12 3344555555567888999999986521 1111 2222222 222456899
Q ss_pred EcCCcchhh
Q 021352 118 LRGNHESRQ 126 (313)
Q Consensus 118 lrGNHE~~~ 126 (313)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999853
No 69
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.02 E-value=0.00011 Score=67.11 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=51.9
Q ss_pred CCceeeccCCCC------HHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhh--hCCCcEEEEcCCcchh
Q 021352 54 SPVTICGDIHGQ------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKV--RYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~--~~p~~v~~lrGNHE~~ 125 (313)
++|+.|+|+|-. .+.+.++++.+...+.+-+|+.||+.++|. .+-...+..+-. ..|..++.++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 478999999977 345666777777666788999999999964 222222222222 4556699999999987
Q ss_pred hhh
Q 021352 126 QIT 128 (313)
Q Consensus 126 ~~~ 128 (313)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 70
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.95 E-value=1.4e-05 Score=75.78 Aligned_cols=72 Identities=19% Similarity=0.290 Sum_probs=49.0
Q ss_pred CCceeeccCC-C-----------CHHHHHHHHHHcCCCCCCceeeeeceecCC-CCcHHHHHHHHH--h--hhhCCCcEE
Q 021352 54 SPVTICGDIH-G-----------QFHDLAELFRIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVS--L--KVRYPQRIT 116 (313)
Q Consensus 54 ~~i~viGDiH-G-----------~~~~l~~il~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~--l--k~~~p~~v~ 116 (313)
||++.+||+| | ....|.++++.+.....+.+++.||++|+. +.+.+++.++.. + ....+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999999 4 234555666655555668888999999985 445555544433 1 122344699
Q ss_pred EEcCCcchh
Q 021352 117 ILRGNHESR 125 (313)
Q Consensus 117 ~lrGNHE~~ 125 (313)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 71
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.79 E-value=9.8e-05 Score=67.52 Aligned_cols=70 Identities=16% Similarity=0.243 Sum_probs=44.6
Q ss_pred ceeeccCCCCHHHHHHHHHHc---CCCCCCceeeeeceecCCCC-cHHHH----------HHHHHh--hhhCCCcEEEEc
Q 021352 56 VTICGDIHGQFHDLAELFRIG---GKCPDTNYLFMGDYVDRGYY-SVETV----------TLLVSL--KVRYPQRITILR 119 (313)
Q Consensus 56 i~viGDiHG~~~~l~~il~~~---~~~~~~~~vfLGD~vDrG~~-s~evl----------~~l~~l--k~~~p~~v~~lr 119 (313)
|+|+||+||+++.+.+.++.. ...+.+-+|++||+...+.. ..+.+ ++..-+ ....|--+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999987755443 23456778899999654432 22222 111111 122454579999
Q ss_pred CCcchh
Q 021352 120 GNHESR 125 (313)
Q Consensus 120 GNHE~~ 125 (313)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 72
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.76 E-value=4.4e-05 Score=67.17 Aligned_cols=72 Identities=25% Similarity=0.253 Sum_probs=48.4
Q ss_pred CceeeccCC-CCH--------------HHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHH----HHHHhhhhCCCcE
Q 021352 55 PVTICGDIH-GQF--------------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVT----LLVSLKVRYPQRI 115 (313)
Q Consensus 55 ~i~viGDiH-G~~--------------~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~----~l~~lk~~~p~~v 115 (313)
||+.++|+| |.. ..|.++++.+.....+.+|++||+++....+.+.+. .+.+++. .+..+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 588999999 321 246666666655566778899999998765544333 3333321 13359
Q ss_pred EEEcCCcchhhh
Q 021352 116 TILRGNHESRQI 127 (313)
Q Consensus 116 ~~lrGNHE~~~~ 127 (313)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998653
No 73
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.74 E-value=7.4e-05 Score=63.81 Aligned_cols=59 Identities=15% Similarity=0.146 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCCCCceeeeeceecCCCCcH-HHHHHH-HHhhhhCCCcEEEEcCCcchhh
Q 021352 68 DLAELFRIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLL-VSLKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 68 ~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l-~~lk~~~p~~v~~lrGNHE~~~ 126 (313)
.+.++.+.+...+.+.+|++||+++...... +....+ .......+..+++++||||...
T Consensus 29 ~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 29 TLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 3444444444456788999999998654332 222221 1111223346999999999853
No 74
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.67 E-value=0.00011 Score=65.73 Aligned_cols=69 Identities=17% Similarity=0.213 Sum_probs=44.0
Q ss_pred CCceeeccCC-CCHHHH----------------HHHHHHcCCCCCCceeeeeceecCCCCc---HHHHHHHHHhhhhCCC
Q 021352 54 SPVTICGDIH-GQFHDL----------------AELFRIGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVSLKVRYPQ 113 (313)
Q Consensus 54 ~~i~viGDiH-G~~~~l----------------~~il~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~lk~~~p~ 113 (313)
.+..+|+|+| |--..+ .++.+.....+.+.+|++||+.+..... .++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6789999999 543332 2233333344568899999999765542 22333443332 3
Q ss_pred cEEEEcCCcchhh
Q 021352 114 RITILRGNHESRQ 126 (313)
Q Consensus 114 ~v~~lrGNHE~~~ 126 (313)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 6999999999753
No 75
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.59 E-value=0.00065 Score=58.10 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=31.7
Q ss_pred CCCCCCceeeeeceecCCCCcH--H---HHHHHHHhhhh-C----CCcEEEEcCCcchhh
Q 021352 77 GKCPDTNYLFMGDYVDRGYYSV--E---TVTLLVSLKVR-Y----PQRITILRGNHESRQ 126 (313)
Q Consensus 77 ~~~~~~~~vfLGD~vDrG~~s~--e---vl~~l~~lk~~-~----p~~v~~lrGNHE~~~ 126 (313)
...+.+.+|++||++|.+.... + .+..+.++... . +..+++++||||...
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 3455678999999999887432 2 23333332211 1 345999999999853
No 76
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.58 E-value=0.00016 Score=69.98 Aligned_cols=55 Identities=15% Similarity=0.171 Sum_probs=42.8
Q ss_pred cCCCceeeccCCCC------------HHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHH
Q 021352 52 VKSPVTICGDIHGQ------------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVS 106 (313)
Q Consensus 52 ~~~~i~viGDiHG~------------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 106 (313)
..+||..++|+|-. +..|.++++.+.....+-+|+.||++|++.-|.+++..++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 35789999999942 55778888887666677788899999999888887654433
No 77
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.46 E-value=0.00018 Score=69.93 Aligned_cols=72 Identities=24% Similarity=0.289 Sum_probs=47.5
Q ss_pred CCceeeccCC-CC-------HHH----HHHHHHHcCCCCCCceeeeeceecCCCCcHHH----HHHHHHhhhhCCCcEEE
Q 021352 54 SPVTICGDIH-GQ-------FHD----LAELFRIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVSLKVRYPQRITI 117 (313)
Q Consensus 54 ~~i~viGDiH-G~-------~~~----l~~il~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~lk~~~p~~v~~ 117 (313)
++++.++|+| |. ..+ +..+.+.+.....+.+|+.||++|++..+.+. ..++..|+.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 5789999999 32 111 33444544455678888999999998655433 2344455432 335999
Q ss_pred EcCCcchhh
Q 021352 118 LRGNHESRQ 126 (313)
Q Consensus 118 lrGNHE~~~ 126 (313)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 78
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.41 E-value=0.002 Score=56.23 Aligned_cols=48 Identities=19% Similarity=0.315 Sum_probs=35.1
Q ss_pred CCCCCceeeeeceecCCCCc--HHHHHHHHHhhhhCC----CcEEEEcCCcchh
Q 021352 78 KCPDTNYLFMGDYVDRGYYS--VETVTLLVSLKVRYP----QRITILRGNHESR 125 (313)
Q Consensus 78 ~~~~~~~vfLGD~vDrG~~s--~evl~~l~~lk~~~p----~~v~~lrGNHE~~ 125 (313)
....+-++||||++|.|+.+ .+....+..++..++ -.++.+.||||.-
T Consensus 40 ~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 40 FVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred ccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 34567899999999999954 346666666664422 3588999999964
No 79
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.41 E-value=0.0034 Score=57.30 Aligned_cols=31 Identities=10% Similarity=0.012 Sum_probs=25.7
Q ss_pred cCHHHHHHHHHhCCceEEEeeccccccceEEec
Q 021352 224 FGQDISEQFNHTNNLKLIARAHQLVMEGYNWGH 256 (313)
Q Consensus 224 fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~ 256 (313)
-.++..+.+|+..+-.+|+.||++ ++++..+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 467889999999999999999998 4555544
No 80
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.36 E-value=0.0016 Score=54.49 Aligned_cols=119 Identities=18% Similarity=0.230 Sum_probs=78.9
Q ss_pred eeeccCCCCHHHHHHHHHHcC--CCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCCh
Q 021352 57 TICGDIHGQFHDLAELFRIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFY 134 (313)
Q Consensus 57 ~viGDiHG~~~~l~~il~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (313)
.|+||+||+++.+.+-++... ..+-+-++++||+..-....-+ +.-...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999988777642 2345778899999876555433 33333334456667899999998
Q ss_pred HHHHHHhCCchhHHHHHHHHhcCCceEEEcCcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCCCCCCC
Q 021352 135 DECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 214 (313)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 214 (313)
+-+++++|.=+ ..+...++.. .
T Consensus 69 -----------------------------~~DILlTh~wP-~gi~~~~~~~-------------------~--------- 90 (150)
T cd07380 69 -----------------------------GVDILLTSEWP-KGISKLSKVP-------------------F--------- 90 (150)
T ss_pred -----------------------------CCCEEECCCCc-hhhhhhCCCc-------------------c---------
Confidence 34789988822 1111011100 0
Q ss_pred cCCCCCccccCHHHHHHHHHhCCceEEEeecccc
Q 021352 215 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 248 (313)
Q Consensus 215 ~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~ 248 (313)
...+..-|...+.++++...-++.+.||..+
T Consensus 91 ---~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 91 ---EETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ---cccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 0112235678999999999999999999874
No 81
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.33 E-value=0.00038 Score=64.42 Aligned_cols=72 Identities=19% Similarity=0.161 Sum_probs=51.5
Q ss_pred CCCceeeccCCCCHHH--HHHHHHHcCCCCCCceeeeeceecC-C-CCcHHHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 021352 53 KSPVTICGDIHGQFHD--LAELFRIGGKCPDTNYLFMGDYVDR-G-YYSVETVTLLVSLKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~--l~~il~~~~~~~~~~~vfLGD~vDr-G-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (313)
..+|+.++|+|-.... ..+.+........+-+++.||++|+ . +....+...+..|+...| ++.+.||||...
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g--v~av~GNHd~~~ 119 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG--VFAVLGNHDYGV 119 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC--EEEEeccccccc
Confidence 4569999999987665 3333433333334778889999995 4 445557778888876654 999999999764
No 82
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.31 E-value=0.00032 Score=63.24 Aligned_cols=68 Identities=21% Similarity=0.275 Sum_probs=39.4
Q ss_pred eeeccCC--CCH---HHHHHHHHHcC-CC----CCCceeeeeceecCCCC------------c----HHHHHHHHHhhhh
Q 021352 57 TICGDIH--GQF---HDLAELFRIGG-KC----PDTNYLFMGDYVDRGYY------------S----VETVTLLVSLKVR 110 (313)
Q Consensus 57 ~viGDiH--G~~---~~l~~il~~~~-~~----~~~~~vfLGD~vDrG~~------------s----~evl~~l~~lk~~ 110 (313)
++|||+| +.. ..+..+++.+. .. ..+.+|++||++|+... . .++..++.++..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 6899999 432 22334444322 21 23678899999997310 0 123334444432
Q ss_pred CCCcEEEEcCCcchhh
Q 021352 111 YPQRITILRGNHESRQ 126 (313)
Q Consensus 111 ~p~~v~~lrGNHE~~~ 126 (313)
.-.|+++.||||...
T Consensus 81 -~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 -HIKIIIIPGNHDAVR 95 (243)
T ss_pred -CCeEEEeCCCCCccc
Confidence 235999999999753
No 83
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.0025 Score=61.41 Aligned_cols=40 Identities=28% Similarity=0.459 Sum_probs=32.7
Q ss_pred CCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 81 DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 81 ~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
.+++=.+||+-||||++-.+++.|..+- .+-+--||||..
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDil 230 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDIL 230 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceE
Confidence 3556679999999999999999887763 466789999963
No 84
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.12 E-value=0.00039 Score=64.10 Aligned_cols=69 Identities=20% Similarity=0.225 Sum_probs=42.0
Q ss_pred CCceeeccCCCC----HHHHHHHHHHcCCCCCCceeeeeceecCCCCc-----HHHHHHHHHhhhhCCCcEEEEcCCcch
Q 021352 54 SPVTICGDIHGQ----FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 54 ~~i~viGDiHG~----~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (313)
-+++++||.|.. ...+.++.+. ..+.+-++++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 478999999952 2233333332 23456688899999644332 223333443433444 8899999998
Q ss_pred hh
Q 021352 125 RQ 126 (313)
Q Consensus 125 ~~ 126 (313)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 64
No 85
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.82 E-value=0.0032 Score=52.51 Aligned_cols=66 Identities=20% Similarity=0.214 Sum_probs=41.8
Q ss_pred ceeeccCCC------------CHHHHHHHH-HHcC--CCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcC
Q 021352 56 VTICGDIHG------------QFHDLAELF-RIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRG 120 (313)
Q Consensus 56 i~viGDiHG------------~~~~l~~il-~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrG 120 (313)
++++||.|= +.+....++ .... ..|++.+.+|||+.-.--...+...++.+| |+++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 788899883 333333322 2111 356788899999975433334444444444 578999999
Q ss_pred Ccchh
Q 021352 121 NHESR 125 (313)
Q Consensus 121 NHE~~ 125 (313)
|||--
T Consensus 82 NhDk~ 86 (186)
T COG4186 82 NHDKC 86 (186)
T ss_pred CCCCC
Confidence 99964
No 86
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.80 E-value=0.00076 Score=59.68 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=43.6
Q ss_pred CCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHH--------------------------HHHHH
Q 021352 53 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETV--------------------------TLLVS 106 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl--------------------------~~l~~ 106 (313)
..+|.+++|.||+++.+.++.+.+.....|-++|+||++-....+-|-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 4579999999999999999998876667788999999985443332222 33333
Q ss_pred hhhhCCCcEEEEcCCcchhh
Q 021352 107 LKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~~ 126 (313)
|.. .+--+++|+||||...
T Consensus 85 L~~-~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGE-LGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHC-C-SEEEEE--TTS-SH
T ss_pred HHh-cCCcEEEecCCCCchH
Confidence 332 3345999999999854
No 87
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.68 E-value=0.0023 Score=57.66 Aligned_cols=66 Identities=27% Similarity=0.328 Sum_probs=43.7
Q ss_pred CceeeccCCCCH---------HHHHHHHHHcCCCCCC-ceeeeeceecCCCCcH-----HHHHHHHHhhhhCCCcEEEEc
Q 021352 55 PVTICGDIHGQF---------HDLAELFRIGGKCPDT-NYLFMGDYVDRGYYSV-----ETVTLLVSLKVRYPQRITILR 119 (313)
Q Consensus 55 ~i~viGDiHG~~---------~~l~~il~~~~~~~~~-~~vfLGD~vDrG~~s~-----evl~~l~~lk~~~p~~v~~lr 119 (313)
+|+.++|+||.+ ..+.++++.......+ -++..||+++.++.+. .++..+..+. - -++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~-d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----Y-DAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----C-CEEee
Confidence 588999999876 5667777766544344 4456899999877643 4555554442 2 23456
Q ss_pred CCcchh
Q 021352 120 GNHESR 125 (313)
Q Consensus 120 GNHE~~ 125 (313)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 88
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.62 E-value=0.0047 Score=59.58 Aligned_cols=73 Identities=22% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCceeeccCCCC-------------HHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHH-hhhhC--CCcEEE
Q 021352 54 SPVTICGDIHGQ-------------FHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVS-LKVRY--PQRITI 117 (313)
Q Consensus 54 ~~i~viGDiHG~-------------~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~-lk~~~--p~~v~~ 117 (313)
+|+..++|.|=- +.+|..+++.+.....+-+|+.||+.|++.-|.+++..+.. ++... .-.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578889999954 33555666666555567788899999998877776544333 33222 124999
Q ss_pred EcCCcchhh
Q 021352 118 LRGNHESRQ 126 (313)
Q Consensus 118 lrGNHE~~~ 126 (313)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999864
No 89
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.61 E-value=0.0042 Score=55.51 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=47.5
Q ss_pred cCCCceeeccCCCCHHHHH----------------HHHH-HcCCCCCCceeeeeceecCCCC-----cHHHHHHHHHhhh
Q 021352 52 VKSPVTICGDIHGQFHDLA----------------ELFR-IGGKCPDTNYLFMGDYVDRGYY-----SVETVTLLVSLKV 109 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~~l~----------------~il~-~~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~ 109 (313)
...+..|++|+|=-++... +.+. .......+++|++||+-.-.+. ..++-.++..++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3578999999996655433 2222 2233456789999999754433 2445555554443
Q ss_pred hCCCcEEEEcCCcchhhhh
Q 021352 110 RYPQRITILRGNHESRQIT 128 (313)
Q Consensus 110 ~~p~~v~~lrGNHE~~~~~ 128 (313)
. .+++++||||...-.
T Consensus 98 ~---evi~i~GNHD~~i~~ 113 (235)
T COG1407 98 R---EVIIIRGNHDNGIEE 113 (235)
T ss_pred C---cEEEEeccCCCcccc
Confidence 3 499999999986433
No 90
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.39 E-value=0.12 Score=47.13 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=32.0
Q ss_pred eEEEeeccccccceEEec--CCeEEEEEcCCCCcccCCCcEEEEEEc-CCCceEEEEe
Q 021352 239 KLIARAHQLVMEGYNWGH--EQKVVTIFSAPNYCYRCGNMASILEVD-DCKGHTFIQF 293 (313)
Q Consensus 239 ~~iVrGH~~~~~G~~~~~--~~~~iti~Sa~~y~~~~~n~~avl~i~-~~~~~~~~~~ 293 (313)
+..+.||++.. |..... +++-+.+.|.|.+. ..|.++.+| ++++++.++|
T Consensus 205 hVyf~Gnq~~f-~t~~~~~~~~~~v~lv~vP~Fs----~t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPKF-GTKLVEGEEGQRVLLVCVPSFS----KTGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcce-eeeEEEcCCCCeEEEEEeCCcC----cCCEEEEEECCcCcEEEEeC
Confidence 68999999974 333332 25566677777774 345555555 5777777654
No 91
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.39 E-value=0.038 Score=45.78 Aligned_cols=116 Identities=24% Similarity=0.401 Sum_probs=79.4
Q ss_pred ceeeccCCC--CHHHHHHHHHHcCCCCC-CceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcC
Q 021352 56 VTICGDIHG--QFHDLAELFRIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 56 i~viGDiHG--~~~~l~~il~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
+.++||+|= ...+|-.-|+++-.+++ ++++++|++.- .|.+++|..+. +.++++||--|.-.
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlcs-----~e~~dylk~l~----~dvhiVrGeFD~~~------ 67 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLCS-----KESYDYLKTLS----SDVHIVRGEFDENL------ 67 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcch-----HHHHHHHHhhC----CCcEEEecccCccc------
Confidence 578999995 34455555555545543 66889999764 48999988875 46999999887631
Q ss_pred ChHHHHHHhCCchhHHHHHHHHhcCCceEEE---cCcEEEecCCCCCCccchhhhhccccccCCCCCCccccccccCCCC
Q 021352 133 FYDECLRKYGNANVWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD 209 (313)
Q Consensus 133 ~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~~~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~ 209 (313)
+| |..-++ .-++-++||-.- +=|+||
T Consensus 68 -------~y----------------P~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~-- 96 (183)
T KOG3325|consen 68 -------KY----------------PENKVVTVGQFKIGLCHGHQV--------------------------IPWGDP-- 96 (183)
T ss_pred -------cC----------------CccceEEeccEEEEeecCcEe--------------------------ecCCCH--
Confidence 11 211111 237899999321 237766
Q ss_pred CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEE
Q 021352 210 RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNW 254 (313)
Q Consensus 210 ~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~~ 254 (313)
+++.-.-++.++++++.|||+..+.|+.
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 5666777888999999999998877764
No 92
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.32 E-value=0.044 Score=53.58 Aligned_cols=206 Identities=16% Similarity=0.196 Sum_probs=102.4
Q ss_pred CCceeeccCCC-CHH----HHHHHHHHcC----CCCCCcee-eeeceecCC-C-----------CcHHHHHHHHHhhhhC
Q 021352 54 SPVTICGDIHG-QFH----DLAELFRIGG----KCPDTNYL-FMGDYVDRG-Y-----------YSVETVTLLVSLKVRY 111 (313)
Q Consensus 54 ~~i~viGDiHG-~~~----~l~~il~~~~----~~~~~~~v-fLGD~vDrG-~-----------~s~evl~~l~~lk~~~ 111 (313)
.+++.++|+|= ... .+...++-++ ..+.-+|+ +.||.||-. - +..+-++.+..+-.+-
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~v 305 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQV 305 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhC
Confidence 35899999995 222 2333333222 22333555 579999942 1 3344456666666665
Q ss_pred CC--cEEEEcCCcchhhhhhhcCChHHHH-HHhCCchhHHHHHHHHhcCCceEEE-cCcEEEecCCCCCCccchhhhhc-
Q 021352 112 PQ--RITILRGNHESRQITQVYGFYDECL-RKYGNANVWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLDNIRN- 186 (313)
Q Consensus 112 p~--~v~~lrGNHE~~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~~~vHgGi~p~~~~~~~i~~- 186 (313)
|. .|++.+||||..-....-....+.. ..|... .-.+-.=|...-+ +.+++..||= +++++..
T Consensus 306 p~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf~~~------n~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~ 373 (481)
T COG1311 306 PEHIKVFIMPGNHDAVRQALPQPHFPELIKSLFSLN------NLLFVSNPALVSLHGVDVLIYHGR------SIDDIIKL 373 (481)
T ss_pred CCCceEEEecCCCCccccccCCCCcchhhccccccc------ceEecCCCcEEEECCEEEEEecCC------CHHHHHhh
Confidence 65 4788999999865433222222221 111100 0111122333333 3468888982 3444432
Q ss_pred cccccC-CCCC------------CccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021352 187 FDRVQE-VPHE------------GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253 (313)
Q Consensus 187 i~r~~~-~~~~------------~~~~dllWsdp~~~~~~~~~~r~~~~~fg~~~~~~fl~~~~~~~iVrGH~~~~~G~~ 253 (313)
+++... .+.. ....+-+|.-|.....+. +++ --+++++||++. .|+.
T Consensus 374 vP~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD~lV--------------Iee-----vPDv~~~Ghvh~-~g~~ 433 (481)
T COG1311 374 VPGADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKDYLV--------------IEE-----VPDVFHTGHVHK-FGTG 433 (481)
T ss_pred CCCCCccchHHHHHHHHHhcccCCCCCCccccccCCcCcee--------------ecc-----CCcEEEEccccc-ccee
Confidence 222111 1111 112333444443211111 011 127899999997 5777
Q ss_pred EecCCeEEEEEcCCCCcccCCCcEEEEEEcCC-CceEEEEeec
Q 021352 254 WGHEQKVVTIFSAPNYCYRCGNMASILEVDDC-KGHTFIQFEP 295 (313)
Q Consensus 254 ~~~~~~~iti~Sa~~y~~~~~n~~avl~i~~~-~~~~~~~~~~ 295 (313)
...+.++++..|-+... -.+-++-|+.. ..+....+..
T Consensus 434 ~y~gv~~vns~T~q~qT----efqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 434 VYEGVNLVNSGTWQEQT----EFQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred EEeccceEEeeeecchh----ccceEEEecCcccceeEEeccc
Confidence 77777888888876653 23445555542 3344444443
No 93
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=96.09 E-value=0.051 Score=50.25 Aligned_cols=71 Identities=23% Similarity=0.235 Sum_probs=42.6
Q ss_pred ceeeccCCCC---HHHHHHHHHHcCCC--CCCceeeeeceecCCCCcH--H------HHHHHHHhhhhCCC-cEEEEcCC
Q 021352 56 VTICGDIHGQ---FHDLAELFRIGGKC--PDTNYLFMGDYVDRGYYSV--E------TVTLLVSLKVRYPQ-RITILRGN 121 (313)
Q Consensus 56 i~viGDiHG~---~~~l~~il~~~~~~--~~~~~vfLGD~vDrG~~s~--e------vl~~l~~lk~~~p~-~v~~lrGN 121 (313)
..-.|+-. | ...+..+++.+... +.+-+|+.||+++.+.... + .-.+...++..+|+ .|+.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 44456554 3 34555666655433 5677889999998876421 1 22233334444433 58999999
Q ss_pred cchhhh
Q 021352 122 HESRQI 127 (313)
Q Consensus 122 HE~~~~ 127 (313)
||....
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998643
No 94
>PLN02533 probable purple acid phosphatase
Probab=96.06 E-value=0.0066 Score=59.46 Aligned_cols=71 Identities=18% Similarity=0.253 Sum_probs=42.9
Q ss_pred CCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcH---HHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 021352 53 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVSLKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (313)
.-+++++||+|-. ......++.+.....+-++++||+++-+.... +-..++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4579999999632 22223444444445677888999997544321 12333334433445 889999999753
No 95
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.01 E-value=0.0074 Score=55.41 Aligned_cols=65 Identities=20% Similarity=0.245 Sum_probs=40.4
Q ss_pred CceeeccCCCCH----------------HHHHHHHHHcCCCCCCceee-eeceecCCCCc-----------HHHHHHHHH
Q 021352 55 PVTICGDIHGQF----------------HDLAELFRIGGKCPDTNYLF-MGDYVDRGYYS-----------VETVTLLVS 106 (313)
Q Consensus 55 ~i~viGDiHG~~----------------~~l~~il~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~~l~~ 106 (313)
+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 34566666654433444444 79999865522 234555555
Q ss_pred hhhhCCCcEEEEcCCcch
Q 021352 107 LKVRYPQRITILRGNHES 124 (313)
Q Consensus 107 lk~~~p~~v~~lrGNHE~ 124 (313)
+. + -++..||||.
T Consensus 82 ~g---~--d~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y--DAGTLGNHEF 94 (277)
T ss_pred cC---C--CEEeecccCc
Confidence 43 2 2455699995
No 96
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.00 E-value=0.016 Score=50.51 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=42.7
Q ss_pred ccCCCCHHHHHHHHHHcC-CCCCCceeeeeceecCCCCcH-HHHHHHHHhhhhC---------------------CCcEE
Q 021352 60 GDIHGQFHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSV-ETVTLLVSLKVRY---------------------PQRIT 116 (313)
Q Consensus 60 GDiHG~~~~l~~il~~~~-~~~~~~~vfLGD~vDrG~~s~-evl~~l~~lk~~~---------------------p~~v~ 116 (313)
=|++|+=.=|.++++.+- ....+.++||||++|.|--+- |-.....+.+..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 356677777777777543 345677889999999875332 2234444444332 13568
Q ss_pred EEcCCcchh
Q 021352 117 ILRGNHESR 125 (313)
Q Consensus 117 ~lrGNHE~~ 125 (313)
.|.||||.-
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999973
No 97
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=95.81 E-value=0.014 Score=49.85 Aligned_cols=44 Identities=27% Similarity=0.360 Sum_probs=31.2
Q ss_pred CCCCceeeeecee--cCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhh
Q 021352 79 CPDTNYLFMGDYV--DRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 79 ~~~~~~vfLGD~v--DrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (313)
.+++.++.-||+- -|=+...+-+.++-.| |+.-+++|||||.+.
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 3455566679984 3445566667777665 688999999999873
No 98
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=95.45 E-value=0.0077 Score=58.56 Aligned_cols=114 Identities=15% Similarity=0.051 Sum_probs=93.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccC----CCceeeccCCCCHHHHHHHHHHcCCCCC-CceeeeeceecCCCCcHHH
Q 021352 26 PLSEQEVRVLCEKAKEILMDESNVQPVK----SPVTICGDIHGQFHDLAELFRIGGKCPD-TNYLFMGDYVDRGYYSVET 100 (313)
Q Consensus 26 ~~~~~~~~~ll~~~~~~l~~e~~~~~~~----~~i~viGDiHG~~~~l~~il~~~~~~~~-~~~vfLGD~vDrG~~s~ev 100 (313)
-|...++..++..+.+++..+|++.... .-.+.++|.||.+.|+..+++.- +.. .-|++=|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 4788899999999999999999876442 34788999999999999888754 322 3488899999999999999
Q ss_pred HHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHh
Q 021352 101 VTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKY 141 (313)
Q Consensus 101 l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~ 141 (313)
+..+...+...|....+.|++||.-.+-..++|..+....+
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 99999999999999999999999987766666655444333
No 99
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.92 E-value=0.048 Score=49.76 Aligned_cols=25 Identities=8% Similarity=0.024 Sum_probs=21.1
Q ss_pred HHHHHHHHHhCCceEEEeecccccc
Q 021352 226 QDISEQFNHTNNLKLIARAHQLVME 250 (313)
Q Consensus 226 ~~~~~~fl~~~~~~~iVrGH~~~~~ 250 (313)
.+.+.++++++++++++.||.+...
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccce
Confidence 4567888999999999999999754
No 100
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.87 E-value=0.022 Score=52.74 Aligned_cols=65 Identities=23% Similarity=0.316 Sum_probs=41.0
Q ss_pred CceeeccCCCCHH--------------HHHHHHHHcCCCCC-CceeeeeceecCCCC-c-----HHHHHHHHHhhhhCCC
Q 021352 55 PVTICGDIHGQFH--------------DLAELFRIGGKCPD-TNYLFMGDYVDRGYY-S-----VETVTLLVSLKVRYPQ 113 (313)
Q Consensus 55 ~i~viGDiHG~~~--------------~l~~il~~~~~~~~-~~~vfLGD~vDrG~~-s-----~evl~~l~~lk~~~p~ 113 (313)
+|+.++|+||++. .+..+++....... .-++..||++...+. + ..++..+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 5788999999854 36666666543333 345558999976653 2 2455666555422
Q ss_pred cEEEEcCCcch
Q 021352 114 RITILRGNHES 124 (313)
Q Consensus 114 ~v~~lrGNHE~ 124 (313)
+ +..||||.
T Consensus 79 -a-~t~GNHef 87 (288)
T cd07412 79 -A-SAVGNHEF 87 (288)
T ss_pred -e-eeeccccc
Confidence 3 55699995
No 101
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.80 E-value=0.044 Score=49.79 Aligned_cols=65 Identities=22% Similarity=0.246 Sum_probs=40.1
Q ss_pred CceeeccCCCCH----------HHHHHHHHHcCCCCCCceeeeeceecCCCCc-----HHHHHHHHHhhhhCCCcEEEEc
Q 021352 55 PVTICGDIHGQF----------HDLAELFRIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILR 119 (313)
Q Consensus 55 ~i~viGDiHG~~----------~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lr 119 (313)
+|+.++|+||++ ..+..+++.....+..-++..||.++..+.+ ..++..+..+.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 578899999974 4456666655433444455689999876532 234444444321 24 456
Q ss_pred CCcch
Q 021352 120 GNHES 124 (313)
Q Consensus 120 GNHE~ 124 (313)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 102
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=94.45 E-value=0.056 Score=41.63 Aligned_cols=43 Identities=16% Similarity=0.141 Sum_probs=33.8
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc
Q 021352 10 SHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPV 52 (313)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~ 52 (313)
+...++.|++.|+++..|+...+..|+.++.++|+++|+++++
T Consensus 53 t~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 53 TLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp -HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 3456899999999999999999999999999999999998753
No 103
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.37 E-value=0.12 Score=47.01 Aligned_cols=65 Identities=22% Similarity=0.167 Sum_probs=37.5
Q ss_pred CceeeccCCCCHH----------------------HHHHHHHHcCCC-CCCce-eeeeceecCCCCc-----HHHHHHHH
Q 021352 55 PVTICGDIHGQFH----------------------DLAELFRIGGKC-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 105 (313)
Q Consensus 55 ~i~viGDiHG~~~----------------------~l~~il~~~~~~-~~~~~-vfLGD~vDrG~~s-----~evl~~l~ 105 (313)
.|+.++|+||++. .+..+++..... ..+.+ +..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 3667888888743 344555554333 33444 4589999876533 23455554
Q ss_pred HhhhhCCCcEEEEcCCcchh
Q 021352 106 SLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 106 ~lk~~~p~~v~~lrGNHE~~ 125 (313)
.+. - -.+. ||||..
T Consensus 82 ~~g----~-da~~-GNHefd 95 (264)
T cd07411 82 ALG----V-DAMV-GHWEFT 95 (264)
T ss_pred hhC----C-eEEe-cccccc
Confidence 432 2 2334 999953
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=93.28 E-value=0.15 Score=48.18 Aligned_cols=74 Identities=18% Similarity=0.317 Sum_probs=46.9
Q ss_pred CCceeeccCCCCHHHHHHH---HHHcCCCCCCceeeeecee-cCCCCcHHHH------HHHHH------hhhhCCCcEEE
Q 021352 54 SPVTICGDIHGQFHDLAEL---FRIGGKCPDTNYLFMGDYV-DRGYYSVETV------TLLVS------LKVRYPQRITI 117 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~i---l~~~~~~~~~~~vfLGD~v-DrG~~s~evl------~~l~~------lk~~~p~~v~~ 117 (313)
|||.|=|=-||.++.+-+- .++.|-.+.+.++++||+= -|......++ +.+.. =...+|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 6899999999999988844 4455666778899999983 2222211111 11111 11235544678
Q ss_pred EcCCcchhhh
Q 021352 118 LRGNHESRQI 127 (313)
Q Consensus 118 lrGNHE~~~~ 127 (313)
|=||||.+..
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999998753
No 105
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=93.25 E-value=0.15 Score=47.03 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=38.5
Q ss_pred CceeeccCCCCH---------------------HHHHHHHHHcCCCCCCcee-eeeceecCCCC-----cHHHHHHHHHh
Q 021352 55 PVTICGDIHGQF---------------------HDLAELFRIGGKCPDTNYL-FMGDYVDRGYY-----SVETVTLLVSL 107 (313)
Q Consensus 55 ~i~viGDiHG~~---------------------~~l~~il~~~~~~~~~~~v-fLGD~vDrG~~-----s~evl~~l~~l 107 (313)
+|+.++|+||++ ..+..+++.........++ -.||++...+. ...++..+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467889999874 4455556554433333333 47999987653 23344444444
Q ss_pred hhhCCCcEEEEcCCcchh
Q 021352 108 KVRYPQRITILRGNHESR 125 (313)
Q Consensus 108 k~~~p~~v~~lrGNHE~~ 125 (313)
.. .+ +..||||.-
T Consensus 82 g~----D~-~~lGNHefd 94 (281)
T cd07409 82 GY----DA-MTLGNHEFD 94 (281)
T ss_pred CC----CE-EEecccccc
Confidence 32 24 445999963
No 106
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=92.34 E-value=0.22 Score=45.29 Aligned_cols=64 Identities=27% Similarity=0.236 Sum_probs=41.0
Q ss_pred ceeeccCC----------CCHHHHHHHHHHcCCCCCC-ceeeeeceecCCCC-----cHHHHHHHHHhhhhCCCcEEEEc
Q 021352 56 VTICGDIH----------GQFHDLAELFRIGGKCPDT-NYLFMGDYVDRGYY-----SVETVTLLVSLKVRYPQRITILR 119 (313)
Q Consensus 56 i~viGDiH----------G~~~~l~~il~~~~~~~~~-~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p~~v~~lr 119 (313)
|.-+.|+| |.+..+..+++.......+ -++..||+++.++. ...++..+..+.. -+...
T Consensus 3 il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~ 77 (257)
T cd07406 3 ILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACF 77 (257)
T ss_pred EEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEee
Confidence 45566666 4567777788776544444 44458999987652 2456666665532 35578
Q ss_pred CCcch
Q 021352 120 GNHES 124 (313)
Q Consensus 120 GNHE~ 124 (313)
||||.
T Consensus 78 GNHef 82 (257)
T cd07406 78 GNHEF 82 (257)
T ss_pred ccccc
Confidence 99996
No 107
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=92.02 E-value=0.62 Score=43.88 Aligned_cols=47 Identities=15% Similarity=0.161 Sum_probs=27.1
Q ss_pred CCCCCceeeeeceecCCCCcHH---HHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 78 KCPDTNYLFMGDYVDRGYYSVE---TVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 78 ~~~~~~~vfLGD~vDrG~~s~e---vl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
....+-+||+||.|+- ..... ++....+=.+.+.=-...+.||||..
T Consensus 98 sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 98 SEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred ccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEecccccc
Confidence 3456788999999986 33322 22222222222222256899999985
No 108
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=91.78 E-value=0.35 Score=46.73 Aligned_cols=71 Identities=20% Similarity=0.382 Sum_probs=46.2
Q ss_pred CCceeeccCC--C---------CHH------HHHHHHHHcC-CCCCCceeeeeceecCCCC--cHHHHHHHHHhhhhCCC
Q 021352 54 SPVTICGDIH--G---------QFH------DLAELFRIGG-KCPDTNYLFMGDYVDRGYY--SVETVTLLVSLKVRYPQ 113 (313)
Q Consensus 54 ~~i~viGDiH--G---------~~~------~l~~il~~~~-~~~~~~~vfLGD~vDrG~~--s~evl~~l~~lk~~~p~ 113 (313)
.+|..|+|-| | -++ -|.+.++..- .-..+.++||||++|-|.. .-|=-....+++..+|.
T Consensus 49 ~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~ 128 (410)
T KOG3662|consen 49 TKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGR 128 (410)
T ss_pred eEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCC
Confidence 4788889876 3 122 2233443332 2345667789999998874 34455566666666654
Q ss_pred ----cEEEEcCCcch
Q 021352 114 ----RITILRGNHES 124 (313)
Q Consensus 114 ----~v~~lrGNHE~ 124 (313)
.++.+.||||-
T Consensus 129 k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 129 KGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCeeEEeCCcccc
Confidence 68899999996
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=91.76 E-value=0.27 Score=45.12 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=48.7
Q ss_pred CCceeeccCCCC--HHHHHHHHHHcCCCCCCcee-eeeceecCC-CCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 54 SPVTICGDIHGQ--FHDLAELFRIGGKCPDTNYL-FMGDYVDRG-YYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~--~~~l~~il~~~~~~~~~~~v-fLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
|||.++|||=|. ...+...|..+.......++ .-||....| .-+.++.+.|..+-. .++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 689999999999 56777788776544333444 569998766 456778888887654 36666 999974
No 110
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.71 E-value=0.2 Score=55.30 Aligned_cols=66 Identities=18% Similarity=0.232 Sum_probs=42.4
Q ss_pred CCceeeccCCCCH---HHHHHHHHHcCCCCCCceee-eeceecCCCCc-----HHHHHHHHHhhhhCCCcEEEEcCCcch
Q 021352 54 SPVTICGDIHGQF---HDLAELFRIGGKCPDTNYLF-MGDYVDRGYYS-----VETVTLLVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 54 ~~i~viGDiHG~~---~~l~~il~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (313)
.+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+..+. --++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 4689999999875 45555555543333344444 79999877643 24555555543 23568999996
No 111
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=91.28 E-value=0.4 Score=46.87 Aligned_cols=32 Identities=9% Similarity=-0.040 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCceEEEeeccccccceEEecCC
Q 021352 227 DISEQFNHTNNLKLIARAHQLVMEGYNWGHEQ 258 (313)
Q Consensus 227 ~~~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~ 258 (313)
..++.++-++++++++.||.+.-+......+.
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~ 353 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNN 353 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhcc
Confidence 46899999999999999999975554433333
No 112
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=89.96 E-value=0.29 Score=45.25 Aligned_cols=66 Identities=18% Similarity=0.057 Sum_probs=36.2
Q ss_pred CceeeccCCCCHHH----------HHHHHHHcCC-----CCCCceeeeeceecCCC-----CcHHHHHHHHHhhhhCCCc
Q 021352 55 PVTICGDIHGQFHD----------LAELFRIGGK-----CPDTNYLFMGDYVDRGY-----YSVETVTLLVSLKVRYPQR 114 (313)
Q Consensus 55 ~i~viGDiHG~~~~----------l~~il~~~~~-----~~~~~~vfLGD~vDrG~-----~s~evl~~l~~lk~~~p~~ 114 (313)
.|+.++|+||++.. +..+++.... .+..-++-.||.+.-.+ ....++.++..+...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 47788999998533 4444544322 22223334799984323 123345555555432
Q ss_pred EEEEcCCcchh
Q 021352 115 ITILRGNHESR 125 (313)
Q Consensus 115 v~~lrGNHE~~ 125 (313)
+ +..||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 4 444999953
No 113
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=89.08 E-value=3.9 Score=35.35 Aligned_cols=85 Identities=19% Similarity=0.273 Sum_probs=63.9
Q ss_pred CceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChH----------------HHHHHhCCch
Q 021352 82 TNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 145 (313)
Q Consensus 82 ~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~----------------e~~~~~~~~~ 145 (313)
..+|++|- |-+..|+++++..++..|-++-+. .|+-|.|..+....|.. |..+.| ...
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 45788875 899999999999999998775554 89999998876444321 222333 245
Q ss_pred hHHHHHHHHhcCCceEEEcCcEEEecC
Q 021352 146 VWKIFTDLFDYFPLTALVESEIFCLHG 172 (313)
Q Consensus 146 ~~~~~~~~~~~lP~~~~i~~~~~~vHg 172 (313)
++..+...+.++++...+..+++.+.|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 677778888888998888888888888
No 114
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=88.76 E-value=0.51 Score=41.15 Aligned_cols=72 Identities=11% Similarity=0.163 Sum_probs=40.5
Q ss_pred ceeeccCCCC-----HHHHHHHHHHcC-CCCCCceeeeeceecCCCCcH----------HHHHHHHHhhhh-----CCCc
Q 021352 56 VTICGDIHGQ-----FHDLAELFRIGG-KCPDTNYLFMGDYVDRGYYSV----------ETVTLLVSLKVR-----YPQR 114 (313)
Q Consensus 56 i~viGDiHG~-----~~~l~~il~~~~-~~~~~~~vfLGD~vDrG~~s~----------evl~~l~~lk~~-----~p~~ 114 (313)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+... .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677777754 667788887776 566678999999999632111 111222222211 1137
Q ss_pred EEEEcCCcchhhh
Q 021352 115 ITILRGNHESRQI 127 (313)
Q Consensus 115 v~~lrGNHE~~~~ 127 (313)
|++++|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 115
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=87.17 E-value=1.1 Score=40.79 Aligned_cols=66 Identities=21% Similarity=0.243 Sum_probs=44.6
Q ss_pred CceeeccCCCCHH--HHHHHHHHcCCCCCCcee-eeeceecCC-CCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 55 PVTICGDIHGQFH--DLAELFRIGGKCPDTNYL-FMGDYVDRG-YYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 55 ~i~viGDiHG~~~--~l~~il~~~~~~~~~~~v-fLGD~vDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
||.+||||=|.-. .+...|..........++ .-||..--| .-+.++...|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 5889999999866 456666655433333344 469987666 3577788888777543 5555 999863
No 116
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=86.12 E-value=0.69 Score=46.42 Aligned_cols=69 Identities=28% Similarity=0.314 Sum_probs=43.9
Q ss_pred cCCCceeeccCCCCHH------------HHHHH---HHHcCCCCCCcee-eeeceecCCC------CcHHHHHHHHHhhh
Q 021352 52 VKSPVTICGDIHGQFH------------DLAEL---FRIGGKCPDTNYL-FMGDYVDRGY------YSVETVTLLVSLKV 109 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~------------~l~~i---l~~~~~~~~~~~v-fLGD~vDrG~------~s~evl~~l~~lk~ 109 (313)
.+-+|+-..|+||.+. .+.++ .+...-.....++ =.||+++..+ .....+.++..|+-
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y 104 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY 104 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC
Confidence 3567889999999999 33333 3333222223333 4799999843 34456777777753
Q ss_pred hCCCcEEEEcCCcchh
Q 021352 110 RYPQRITILRGNHESR 125 (313)
Q Consensus 110 ~~p~~v~~lrGNHE~~ 125 (313)
. .+-.||||.-
T Consensus 105 D-----a~tiGNHEFd 115 (517)
T COG0737 105 D-----AMTLGNHEFD 115 (517)
T ss_pred c-----EEeecccccc
Confidence 3 4778999974
No 117
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=85.87 E-value=0.92 Score=42.59 Aligned_cols=65 Identities=23% Similarity=0.222 Sum_probs=39.4
Q ss_pred CceeeccCCCCHH------HHHHHHHHcCC-----CCCCceeeeeceecCCCC-------------cHHHHHHHHHhhhh
Q 021352 55 PVTICGDIHGQFH------DLAELFRIGGK-----CPDTNYLFMGDYVDRGYY-------------SVETVTLLVSLKVR 110 (313)
Q Consensus 55 ~i~viGDiHG~~~------~l~~il~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~lk~~ 110 (313)
.|+-..|+||++. .+..+++.... .+..-++..||.+.-++. ...++.++-++..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 3677899999953 44444444321 223334458998875442 3455666666653
Q ss_pred CCCcEEEEcCCcch
Q 021352 111 YPQRITILRGNHES 124 (313)
Q Consensus 111 ~p~~v~~lrGNHE~ 124 (313)
=.+..||||.
T Consensus 81 ----Da~tlGNHEF 90 (313)
T cd08162 81 ----QAIALGNHEF 90 (313)
T ss_pred ----cEEecccccc
Confidence 3477999995
No 118
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=84.99 E-value=0.97 Score=41.78 Aligned_cols=67 Identities=18% Similarity=0.094 Sum_probs=38.2
Q ss_pred CCceeeccCCCCHH-------------HHHHHHHHc----CCCCCCc-eeeeeceecCCCC-------cHHHHHHHHHhh
Q 021352 54 SPVTICGDIHGQFH-------------DLAELFRIG----GKCPDTN-YLFMGDYVDRGYY-------SVETVTLLVSLK 108 (313)
Q Consensus 54 ~~i~viGDiHG~~~-------------~l~~il~~~----~~~~~~~-~vfLGD~vDrG~~-------s~evl~~l~~lk 108 (313)
-+|+-+.|+||.+. .+.++.+.. ....... ++-.||.+..-+. ...+++++-.+.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg 85 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP 85 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC
Confidence 46888999999763 222332222 1112223 3448999875442 233455555553
Q ss_pred hhCCCcEEEEcCCcchh
Q 021352 109 VRYPQRITILRGNHESR 125 (313)
Q Consensus 109 ~~~p~~v~~lrGNHE~~ 125 (313)
.=.+..||||.-
T Consensus 86 -----yDa~tlGNHEFd 97 (282)
T cd07407 86 -----YDLLTIGNHELY 97 (282)
T ss_pred -----CcEEeecccccC
Confidence 345789999983
No 119
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=83.64 E-value=1.3 Score=45.76 Aligned_cols=68 Identities=19% Similarity=0.173 Sum_probs=42.5
Q ss_pred cCCCceeeccCCCCHHH----------------HHHHHHHcCCC-CCCceeeeeceecCCCCc-------------HHHH
Q 021352 52 VKSPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYYS-------------VETV 101 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~~----------------l~~il~~~~~~-~~~~~vfLGD~vDrG~~s-------------~evl 101 (313)
...+|+-..|+||++.. +..+++..... +..-+|-.||.+...|.+ ..++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 46789999999998742 33444444322 233344589998765532 1356
Q ss_pred HHHHHhhhhCCCcEEEEcCCcch
Q 021352 102 TLLVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~ 124 (313)
..+..|. .=....||||.
T Consensus 104 ~amN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHHHhcC-----CcEEeccchhh
Confidence 6666654 24578899995
No 120
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=83.19 E-value=1.4 Score=45.49 Aligned_cols=66 Identities=20% Similarity=0.147 Sum_probs=40.0
Q ss_pred CCceeeccCCCCHHH----------------HHHHHHHcCCC-CCCceeeeeceecCCCCc-------------HHHHHH
Q 021352 54 SPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYYS-------------VETVTL 103 (313)
Q Consensus 54 ~~i~viGDiHG~~~~----------------l~~il~~~~~~-~~~~~vfLGD~vDrG~~s-------------~evl~~ 103 (313)
-+|+-..|+||++.. +..+++..... +..-++-.||.+.-.+.+ ..++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 468889999999753 33444443322 233344589998755432 235555
Q ss_pred HHHhhhhCCCcEEEEcCCcch
Q 021352 104 LVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 104 l~~lk~~~p~~v~~lrGNHE~ 124 (313)
+-.|.. =....||||.
T Consensus 83 mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HhhcCc-----cEEecccccc
Confidence 655542 3477899995
No 121
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.56 E-value=2.9 Score=40.91 Aligned_cols=69 Identities=20% Similarity=0.378 Sum_probs=51.3
Q ss_pred CCCceeeccCCCCHHHHHHHHHHcCC--CCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCc
Q 021352 53 KSPVTICGDIHGQFHDLAELFRIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNH 122 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~il~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 122 (313)
..+|.+|||.-|+++.|.+-.+.... .|-+-++++|++.+...++.|++.+...-+ ..|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 47899999999999998877766543 245778899999998677788877765543 3455566766665
No 122
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=82.39 E-value=1.4 Score=48.70 Aligned_cols=67 Identities=22% Similarity=0.270 Sum_probs=40.7
Q ss_pred CCCceeeccCCCCHH----------------HHHHHHHHcCCCCCCceee-eeceecCCCC--------------cHHHH
Q 021352 53 KSPVTICGDIHGQFH----------------DLAELFRIGGKCPDTNYLF-MGDYVDRGYY--------------SVETV 101 (313)
Q Consensus 53 ~~~i~viGDiHG~~~----------------~l~~il~~~~~~~~~~~vf-LGD~vDrG~~--------------s~evl 101 (313)
.-+|+..+|+||++. .+..+++.........+++ .||.+...+- ...++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 456899999999863 3344454443222334444 7999976551 22455
Q ss_pred HHHHHhhhhCCCcEEEEcCCcch
Q 021352 102 TLLVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~ 124 (313)
..+..|. .=....||||.
T Consensus 121 ~~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHHhhcC-----ccEEeeccccc
Confidence 5555553 23466999996
No 123
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=77.14 E-value=6.8 Score=36.33 Aligned_cols=74 Identities=15% Similarity=0.291 Sum_probs=48.3
Q ss_pred CCCceeeccCCC----CHHHHHHHHHHcC-CCC----CCceeeeeceecCC----CCc----HHHHHHHHHh-hhhCC--
Q 021352 53 KSPVTICGDIHG----QFHDLAELFRIGG-KCP----DTNYLFMGDYVDRG----YYS----VETVTLLVSL-KVRYP-- 112 (313)
Q Consensus 53 ~~~i~viGDiHG----~~~~l~~il~~~~-~~~----~~~~vfLGD~vDrG----~~s----~evl~~l~~l-k~~~p-- 112 (313)
..+++|+||+|= .+++|.++|+... ..+ ...+|+.|+++-+. ..+ .+-++-|..+ ...+|
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 467999999995 5667777777662 222 45588999998653 222 2344455442 33444
Q ss_pred ---CcEEEEcCCcchhh
Q 021352 113 ---QRITILRGNHESRQ 126 (313)
Q Consensus 113 ---~~v~~lrGNHE~~~ 126 (313)
.++++++|-.|-+.
T Consensus 107 ~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 107 LEHCYLIFIPGINDPCA 123 (291)
T ss_pred HhcCeEEEECCCCCCCc
Confidence 58999999999753
No 124
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=76.57 E-value=2.5 Score=42.78 Aligned_cols=67 Identities=19% Similarity=0.088 Sum_probs=37.3
Q ss_pred CCCceeeccCCCCHH----------HHHHHHHHcC-----CCCCCceeeeeceecCCCC-----cHHHHHHHHHhhhhCC
Q 021352 53 KSPVTICGDIHGQFH----------DLAELFRIGG-----KCPDTNYLFMGDYVDRGYY-----SVETVTLLVSLKVRYP 112 (313)
Q Consensus 53 ~~~i~viGDiHG~~~----------~l~~il~~~~-----~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk~~~p 112 (313)
.-.|+-+.|+||++. .+..+++... ..+..-++..||.+.-.+. ...++.++..+...
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D-- 111 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD-- 111 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC--
Confidence 456889999999874 2233343322 1223334457998864332 22345555555432
Q ss_pred CcEEEEcCCcch
Q 021352 113 QRITILRGNHES 124 (313)
Q Consensus 113 ~~v~~lrGNHE~ 124 (313)
+ +..||||.
T Consensus 112 --a-~tlGNHEF 120 (551)
T PRK09558 112 --A-MAVGNHEF 120 (551)
T ss_pred --E-Eccccccc
Confidence 4 44599995
No 125
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=76.33 E-value=3.2 Score=43.98 Aligned_cols=67 Identities=21% Similarity=0.164 Sum_probs=40.4
Q ss_pred CCCceeeccCCCCHHH----------------HHHHHHHcCCC-CCCceeeeeceecCCCCc--------------HHHH
Q 021352 53 KSPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYYS--------------VETV 101 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~----------------l~~il~~~~~~-~~~~~vfLGD~vDrG~~s--------------~evl 101 (313)
.-+|+-..|+||++.. +..+++..... +..-+|-.||.+.--|.. ..++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 4578889999999642 22334433222 233344589988754421 2366
Q ss_pred HHHHHhhhhCCCcEEEEcCCcch
Q 021352 102 TLLVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~ 124 (313)
..+-.|.. =....||||.
T Consensus 195 ~amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 195 AALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHHhccCC-----CEEEechhhc
Confidence 66666643 3577899995
No 126
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=76.05 E-value=0.16 Score=48.47 Aligned_cols=94 Identities=7% Similarity=-0.165 Sum_probs=64.5
Q ss_pred CCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchhhhhhhcCChHHHHHHhCC---chhHHHHHHHHhcC
Q 021352 81 DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN---ANVWKIFTDLFDYF 157 (313)
Q Consensus 81 ~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~l 157 (313)
.-..|++++..+++.+.++.+.+-...+..+-.+-..+++||+... .+..+....-.. -.+++...+-++.+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCccc
Confidence 3457889999999999999998888888777677778999996532 222222211111 12344555556666
Q ss_pred CceEEEcCcEEEecCCCCCCccc
Q 021352 158 PLTALVESEIFCLHGGLSPSIET 180 (313)
Q Consensus 158 P~~~~i~~~~~~vHgGi~p~~~~ 180 (313)
+..++.+ ++++.||+..|....
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~h 144 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSH 144 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccc
Confidence 7666644 999999999987643
No 127
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=74.31 E-value=5.2 Score=40.55 Aligned_cols=64 Identities=19% Similarity=0.154 Sum_probs=36.9
Q ss_pred ceeeccCCCCHHH---------------------HHHHHHHcCC-CCCCceeeeeceecCCCC-----cHHHHHHHHHhh
Q 021352 56 VTICGDIHGQFHD---------------------LAELFRIGGK-CPDTNYLFMGDYVDRGYY-----SVETVTLLVSLK 108 (313)
Q Consensus 56 i~viGDiHG~~~~---------------------l~~il~~~~~-~~~~~~vfLGD~vDrG~~-----s~evl~~l~~lk 108 (313)
|+-+.|+||++.. +..+++.... .+..-++..||.+...+. ....+.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667888887543 3344444332 233344558999865542 233455555553
Q ss_pred hhCCCcEEEEcCCcch
Q 021352 109 VRYPQRITILRGNHES 124 (313)
Q Consensus 109 ~~~p~~v~~lrGNHE~ 124 (313)
--.+..||||.
T Consensus 83 -----~Da~~lGNHEF 93 (550)
T TIGR01530 83 -----FDFFTLGNHEF 93 (550)
T ss_pred -----CCEEEeccccc
Confidence 24578999995
No 128
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=74.14 E-value=5.3 Score=36.67 Aligned_cols=66 Identities=20% Similarity=0.266 Sum_probs=41.9
Q ss_pred CCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCC-CcEEEEcCCcchhh
Q 021352 53 KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYP-QRITILRGNHESRQ 126 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p-~~v~~lrGNHE~~~ 126 (313)
..|.+.|+|-|+...+.. ..++.|.++-+||+..-|. +-||..+=..+-. .| .+-+.|+||||...
T Consensus 61 ~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gs-lph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGS-LPHEYKIVIAGNHELTF 127 (305)
T ss_pred ceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhcc-CcceeeEEEeeccceee
Confidence 468999999998766544 2445566678999876554 4455444332221 12 23568999999753
No 129
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=73.83 E-value=4.8 Score=39.04 Aligned_cols=73 Identities=8% Similarity=-0.052 Sum_probs=40.6
Q ss_pred CCCceeeccCCCCHHHHHH---HHHHc-CCCCCCceeeeeceecCCCCcHHH------HHHHHHhhh-hCCCcEEEEcCC
Q 021352 53 KSPVTICGDIHGQFHDLAE---LFRIG-GKCPDTNYLFMGDYVDRGYYSVET------VTLLVSLKV-RYPQRITILRGN 121 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~---il~~~-~~~~~~~~vfLGD~vDrG~~s~ev------l~~l~~lk~-~~p~~v~~lrGN 121 (313)
.-+++++||-=+-...-.+ .+... ...+.+-+|-+||-++.|..++.- ++-+..-.. .-.-..++++||
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGN 105 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQ 105 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCc
Confidence 3479999995432222222 22222 234456677799988888765443 333332111 001148999999
Q ss_pred cchh
Q 021352 122 HESR 125 (313)
Q Consensus 122 HE~~ 125 (313)
||..
T Consensus 106 HDy~ 109 (394)
T PTZ00422 106 ADWD 109 (394)
T ss_pred cccc
Confidence 9973
No 130
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=72.72 E-value=8.6 Score=38.57 Aligned_cols=56 Identities=18% Similarity=0.172 Sum_probs=41.2
Q ss_pred ccCCCceeeccCCC------------CHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHH
Q 021352 51 PVKSPVTICGDIHG------------QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVS 106 (313)
Q Consensus 51 ~~~~~i~viGDiHG------------~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 106 (313)
+...||.|-.|+|= .+..|..+|..+....-+-++.-||++.-..-|.++|.-...
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~ 78 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLE 78 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHH
Confidence 34578999999994 466888999888766666677779999877777665544333
No 131
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=65.50 E-value=6.3 Score=41.72 Aligned_cols=68 Identities=22% Similarity=0.174 Sum_probs=39.9
Q ss_pred cCCCceeeccCCCCHHH----------------HHHHHHHcCCC-CCCceeeeeceecCCCC------------------
Q 021352 52 VKSPVTICGDIHGQFHD----------------LAELFRIGGKC-PDTNYLFMGDYVDRGYY------------------ 96 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~~----------------l~~il~~~~~~-~~~~~vfLGD~vDrG~~------------------ 96 (313)
..-+|+...|+||++.. +..++++.... +...+|-.||++--.+.
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 35679999999998632 33334433222 23334457998743221
Q ss_pred -cHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 021352 97 -SVETVTLLVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 97 -s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (313)
...++.++-.|.. =....||||.
T Consensus 118 ~~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccCC-----CEEecccccc
Confidence 2346666666643 3577899994
No 132
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=61.01 E-value=17 Score=32.23 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=28.0
Q ss_pred HHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCc
Q 021352 229 SEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYC 270 (313)
Q Consensus 229 ~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~ 270 (313)
+.+.+-..|+++||.||+++..+++.. ++++| ++|-.|++
T Consensus 199 la~~l~~~G~D~IiG~H~Hv~q~~E~~-~~~~I-~YSlGNfi 238 (239)
T cd07381 199 LARALIDAGADLVIGHHPHVLQGIEIY-KGKLI-FYSLGNFV 238 (239)
T ss_pred HHHHHHHCCCCEEEcCCCCcCCCeEEE-CCEEE-EEcCCCcc
Confidence 333444569999999999999999874 45444 36665553
No 133
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=60.70 E-value=8.3 Score=35.49 Aligned_cols=90 Identities=21% Similarity=0.231 Sum_probs=0.0
Q ss_pred HHHHHH----HHHHHHhhCCCccccCCCceeecc--CCCCHHHHHHHHHHcCCCCC---Cceeeeecee-cCCC------
Q 021352 32 VRVLCE----KAKEILMDESNVQPVKSPVTICGD--IHGQFHDLAELFRIGGKCPD---TNYLFMGDYV-DRGY------ 95 (313)
Q Consensus 32 ~~~ll~----~~~~~l~~e~~~~~~~~~i~viGD--iHG~~~~l~~il~~~~~~~~---~~~vfLGD~v-DrG~------ 95 (313)
+.-|+. .+.--.-.+|.--.-.-++.|||| .+|.+..-+-.++.....++ +-++-+||=+ |-|.
T Consensus 18 ~f~I~~~~~s~~eLp~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp 97 (336)
T KOG2679|consen 18 IFFILSAISSTAELPRLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDP 97 (336)
T ss_pred HHHHhhccchhhhhhhhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCCh
Q ss_pred ---CcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 96 ---YSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 96 ---~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
++.+-+.---+|++. -+.+.||||.+
T Consensus 98 ~Fq~sF~nIYT~pSLQkp----Wy~vlGNHDyr 126 (336)
T KOG2679|consen 98 RFQDSFENIYTAPSLQKP----WYSVLGNHDYR 126 (336)
T ss_pred hHHhhhhhcccCcccccc----hhhhccCcccc
No 134
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=57.49 E-value=35 Score=30.74 Aligned_cols=89 Identities=24% Similarity=0.350 Sum_probs=46.5
Q ss_pred Cceeeeecee-cCCC---CcHHHHHHHHHhhhh-------CCCcEEEEcCCcchhhhhhhcCChHHHHH-HhCCchhHHH
Q 021352 82 TNYLFMGDYV-DRGY---YSVETVTLLVSLKVR-------YPQRITILRGNHESRQITQVYGFYDECLR-KYGNANVWKI 149 (313)
Q Consensus 82 ~~~vfLGD~v-DrG~---~s~evl~~l~~lk~~-------~p~~v~~lrGNHE~~~~~~~~~~~~e~~~-~~~~~~~~~~ 149 (313)
+-.+||||=. ||-. ...-++.+|.++... -.++|+.|.||||.-. ++.| ...... +....+.|
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny--~arlanhkls~gDTY-- 160 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNY--MARLANHKLSAGDTY-- 160 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-CchH--HHHHhhCCCCccchh--
Confidence 3467888864 3322 122355555555431 2358999999999742 2211 111111 11112223
Q ss_pred HHHHHhcCCceEEE-cCcEEEecCCCCCC
Q 021352 150 FTDLFDYFPLTALV-ESEIFCLHGGLSPS 177 (313)
Q Consensus 150 ~~~~~~~lP~~~~i-~~~~~~vHgGi~p~ 177 (313)
..++.+|+...- ..+++-.|-||-.+
T Consensus 161 --nlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 161 --NLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred --hccccccccccCcchhhhhcccCceec
Confidence 456677765442 23588888888543
No 135
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=51.26 E-value=37 Score=30.17 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=26.1
Q ss_pred HHhCCceEEEeeccccccceEEecCCeEEEEEcCCCC
Q 021352 233 NHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNY 269 (313)
Q Consensus 233 l~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y 269 (313)
+-..|+++||.||+++..+++.. ++++| ++|-.|+
T Consensus 201 l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 201 LIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 33469999999999999999875 45555 4665554
No 136
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=50.33 E-value=38 Score=30.31 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=28.9
Q ss_pred HHHHHHhCCceEEEeeccccccceEEecCCeEEEEEcCCCCc
Q 021352 229 SEQFNHTNNLKLIARAHQLVMEGYNWGHEQKVVTIFSAPNYC 270 (313)
Q Consensus 229 ~~~fl~~~~~~~iVrGH~~~~~G~~~~~~~~~iti~Sa~~y~ 270 (313)
+.+.+-..|+++||.+|.++.+|++.. ++++| ++|-.|+.
T Consensus 208 ~a~~lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNfi 247 (250)
T PF09587_consen 208 LARALIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNFI 247 (250)
T ss_pred HHHHHHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCcccc
Confidence 334444479999999999999999976 45554 36665553
No 137
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=48.33 E-value=40 Score=24.93 Aligned_cols=68 Identities=12% Similarity=0.060 Sum_probs=45.0
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCC--CCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCC
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGN 121 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGN 121 (313)
..+.+|=|---|.+++.++++.+.. +....++.+|+.-|.|..+.+....+..+...+...+++...|
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 3567788866688888888876642 3455567799999988888776666666666655655554444
No 138
>PF07827 KNTase_C: KNTase C-terminal domain; InterPro: IPR012481 Kanamycin nucleotidyltransferase (KNTase) is involved in conferring resistance to aminoglycoside antibiotics and catalyses the transfer of a nucleoside monophosphate group from a nucleotide to kanamycin. This enzyme is dimeric with each subunit being composed of two domains. The C-terminal domain contains five alpha helices, four of which are organised into an up-and-down alpha helical bundle. Residues found in this domain may contribute to this enzyme's active site []. ; GO: 0016779 nucleotidyltransferase activity, 0046677 response to antibiotic; PDB: 1KNY_A.
Probab=45.80 E-value=33 Score=28.25 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=27.4
Q ss_pred CCCCCCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Q 021352 1 MSLDSVPSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKE 41 (313)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 41 (313)
+++||+|+ -.+++++.++++..-+.+.+.+.|+..=.
T Consensus 86 l~Lp~rP~----Gyd~l~~lvm~G~L~d~~~i~~~cE~~W~ 122 (143)
T PF07827_consen 86 LSLPSRPS----GYDELAQLVMSGQLTDPEKIYESCEALWT 122 (143)
T ss_dssp TTSSS--T----THHHHHHHHHHTB---HHHHHHHHHHHHH
T ss_pred hcCCCCCc----cHHHHHHHHhccccCCHHHHHHHHHHHHH
Confidence 57899999 88999999999998889999988887543
No 139
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=43.49 E-value=1.3e+02 Score=26.99 Aligned_cols=69 Identities=23% Similarity=0.250 Sum_probs=38.9
Q ss_pred CceeeccCCCC--H--HHHHHHHH-HcCCCCCCceeeeecee-cCCCCcH------HHHHHHHH-hhhhCCCcEEEEcCC
Q 021352 55 PVTICGDIHGQ--F--HDLAELFR-IGGKCPDTNYLFMGDYV-DRGYYSV------ETVTLLVS-LKVRYPQRITILRGN 121 (313)
Q Consensus 55 ~i~viGDiHG~--~--~~l~~il~-~~~~~~~~~~vfLGD~v-DrG~~s~------evl~~l~~-lk~~~p~~v~~lrGN 121 (313)
+++++||.=.. . .++.+.+. .+...+.+-+|++||++ +-|..+. +.+..+.. +... .-++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQ--VPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhc--CCeEEecCC
Confidence 57889998764 1 23333333 33334456688999997 5553221 22222222 2112 249999999
Q ss_pred cchh
Q 021352 122 HESR 125 (313)
Q Consensus 122 HE~~ 125 (313)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9975
No 140
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=43.13 E-value=13 Score=36.58 Aligned_cols=42 Identities=21% Similarity=0.237 Sum_probs=31.8
Q ss_pred CHHHHHHHHHhCCce----EEEeecccccc--ce-EEecCCeEEEEEcC
Q 021352 225 GQDISEQFNHTNNLK----LIARAHQLVME--GY-NWGHEQKVVTIFSA 266 (313)
Q Consensus 225 g~~~~~~fl~~~~~~----~iVrGH~~~~~--G~-~~~~~~~~iti~Sa 266 (313)
.++...++|+.+|++ .||.||+|+.. |- -+-++|++|-|+.+
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGG 562 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGG 562 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCc
Confidence 355678889999877 89999999875 32 23358999999864
No 141
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=40.18 E-value=71 Score=31.39 Aligned_cols=66 Identities=11% Similarity=0.083 Sum_probs=47.6
Q ss_pred CCceeeccCCC-CHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhC-CCcEEEEcC
Q 021352 54 SPVTICGDIHG-QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRY-PQRITILRG 120 (313)
Q Consensus 54 ~~i~viGDiHG-~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~-p~~v~~lrG 120 (313)
..+.+|=|-|+ +.+++.+.|+.+...+..+++.+||+...|+.+.+.-.-+...-... .+.++ +-|
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 45788999655 68888888887654444578889999999999988877766655443 34444 446
No 142
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=39.67 E-value=33 Score=31.20 Aligned_cols=40 Identities=30% Similarity=0.355 Sum_probs=27.5
Q ss_pred ceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 83 NYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 83 ~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
+++|+||+|++.- -.-+-..|.+++.+++..+++. |-|..
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 4789999998743 2356677888888876555544 55653
No 143
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=38.98 E-value=23 Score=32.48 Aligned_cols=39 Identities=28% Similarity=0.487 Sum_probs=26.0
Q ss_pred ceeeeeceecCCCCcHH-HHHHHHHhhhhCCCcEEEEcCCcchh
Q 021352 83 NYLFMGDYVDRGYYSVE-TVTLLVSLKVRYPQRITILRGNHESR 125 (313)
Q Consensus 83 ~~vfLGD~vDrG~~s~e-vl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (313)
+++|+||++++ ...+ +-..|-.++.+++..+++ .|-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 58999999955 2233 446677888887655444 466665
No 144
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=36.72 E-value=65 Score=29.23 Aligned_cols=25 Identities=16% Similarity=0.178 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCceEEEeecccccc
Q 021352 226 QDISEQFNHTNNLKLIARAHQLVME 250 (313)
Q Consensus 226 ~~~~~~fl~~~~~~~iVrGH~~~~~ 250 (313)
.+.+.++++++++++++.||.+.-+
T Consensus 182 ~~~l~~ll~~~~v~~vl~GH~H~y~ 206 (294)
T cd00839 182 RAALEDLFYKYGVDLVLSGHVHAYE 206 (294)
T ss_pred HHHHHHHHHHhCCCEEEEccceeeE
Confidence 4567788999999999999999743
No 145
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=35.16 E-value=1.7e+02 Score=29.45 Aligned_cols=66 Identities=11% Similarity=-0.022 Sum_probs=44.7
Q ss_pred CHHHHHHHHHhC-CceEEEeeccccccceEEe------cCCeEEEEEcCCCCcccCCCcEEEEEEcC--CCceEEEE
Q 021352 225 GQDISEQFNHTN-NLKLIARAHQLVMEGYNWG------HEQKVVTIFSAPNYCYRCGNMASILEVDD--CKGHTFIQ 292 (313)
Q Consensus 225 g~~~~~~fl~~~-~~~~iVrGH~~~~~G~~~~------~~~~~iti~Sa~~y~~~~~n~~avl~i~~--~~~~~~~~ 292 (313)
..+.+.+.++++ +++.++.||.+...=.... -+...+-|.|++..- +....-+++|-. +..+.+.+
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlvd--fPq~~Ri~Ei~~n~dgt~si~t 441 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHID--FPQQGRIIELADNQDGTVSIFT 441 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEecccccc--CCCCceEEEEEeCCCCcEEEEE
Confidence 456788888887 8999999999976421111 123688888886653 567788888843 45555444
No 146
>PLN02965 Probable pheophorbidase
Probab=34.17 E-value=1.4e+02 Score=26.17 Aligned_cols=21 Identities=14% Similarity=-0.017 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCc--eEEEeeccc
Q 021352 227 DISEQFNHTNNL--KLIARAHQL 247 (313)
Q Consensus 227 ~~~~~fl~~~~~--~~iVrGH~~ 247 (313)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 447888898874 799999996
No 147
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=33.68 E-value=1.5e+02 Score=22.91 Aligned_cols=43 Identities=26% Similarity=0.447 Sum_probs=28.0
Q ss_pred HHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEE
Q 021352 69 LAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITI 117 (313)
Q Consensus 69 l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~ 117 (313)
...+-+.+..-|+.++|++||= |....|+..-+ ...+|++|..
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDs---gq~DpeiY~~i---a~~~P~~i~a 94 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDS---GQHDPEIYAEI---ARRFPGRILA 94 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeC---CCcCHHHHHHH---HHHCCCCEEE
Confidence 3333333445578889999984 66667777665 4568888754
No 148
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=30.12 E-value=20 Score=30.00 Aligned_cols=48 Identities=29% Similarity=0.572 Sum_probs=30.4
Q ss_pred cccCHHHHHHHHHhCCceEE---------EeeccccccceEEecCCeEEEEEcCCCCcccCCC
Q 021352 222 YTFGQDISEQFNHTNNLKLI---------ARAHQLVMEGYNWGHEQKVVTIFSAPNYCYRCGN 275 (313)
Q Consensus 222 ~~fg~~~~~~fl~~~~~~~i---------VrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n 275 (313)
+..++...+.||.+-|.+.| |||+=+++..+.+.. =+.+|+||..||.
T Consensus 20 ~~~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~------~~~~PsYC~~CGk 76 (158)
T PF10083_consen 20 YDKNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGG------HYEAPSYCHNCGK 76 (158)
T ss_pred cccCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCC------CCCCChhHHhCCC
Confidence 33455667788888765554 788877644333311 1458999988875
No 149
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=29.23 E-value=2.5e+02 Score=23.52 Aligned_cols=52 Identities=23% Similarity=0.367 Sum_probs=37.7
Q ss_pred eeeccCCCCHHHHHHHHHH-cCC------------CCCCceeeeeceecCCCCcHHHHHHHHHhh
Q 021352 57 TICGDIHGQFHDLAELFRI-GGK------------CPDTNYLFMGDYVDRGYYSVETVTLLVSLK 108 (313)
Q Consensus 57 ~viGDiHG~~~~l~~il~~-~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~lk 108 (313)
++.+=.+||-..+.+.+.. ++. .....+||+|--+|+|.-+-++..+|..|+
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 3445567777776655432 221 234679999999999999999999999875
No 150
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=28.52 E-value=77 Score=28.83 Aligned_cols=13 Identities=15% Similarity=0.220 Sum_probs=9.7
Q ss_pred ceEEEeecccccc
Q 021352 238 LKLIARAHQLVME 250 (313)
Q Consensus 238 ~~~iVrGH~~~~~ 250 (313)
+..+|-.||++|.
T Consensus 169 vsavvGTHTHV~T 181 (266)
T COG1692 169 VSAVVGTHTHVPT 181 (266)
T ss_pred EEEEEeccCcccc
Confidence 5678888888765
No 151
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.35 E-value=40 Score=31.82 Aligned_cols=58 Identities=29% Similarity=0.432 Sum_probs=37.2
Q ss_pred hhCCCccccCCCceeeccCC-CCHHHHHHHHHHcCCCCCCceee-eecee--cCCCCcHHHHHHHHHhhh
Q 021352 44 MDESNVQPVKSPVTICGDIH-GQFHDLAELFRIGGKCPDTNYLF-MGDYV--DRGYYSVETVTLLVSLKV 109 (313)
Q Consensus 44 ~~e~~~~~~~~~i~viGDiH-G~~~~l~~il~~~~~~~~~~~vf-LGD~v--DrG~~s~evl~~l~~lk~ 109 (313)
+.-|-.+|..+.+.+|||.| |||.++.. .+..++| .-|+= --|+....++.+..+|..
T Consensus 47 ~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 47 KTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred hcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 34455677788999999999 78877753 2333444 55542 125666677777777654
No 152
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.07 E-value=2.9e+02 Score=25.02 Aligned_cols=59 Identities=15% Similarity=0.139 Sum_probs=38.8
Q ss_pred CceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcch
Q 021352 55 PVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (313)
.|-+||- |.-..+.+.+..+..++.. .+++||-+. .++.+..+...- +-.+...|||=.
T Consensus 183 ~vk~VGg--g~ka~i~e~~~ele~~d~s-a~~VGDSIt----Dv~ml~~~rgrG----glAvaFNGNeYa 241 (315)
T COG4030 183 SVKAVGG--GEKAKIMEGYCELEGIDFS-AVVVGDSIT----DVKMLEAARGRG----GLAVAFNGNEYA 241 (315)
T ss_pred hhhhccC--cchhHHHHHHHhhcCCCcc-eeEecCccc----chHHHHHhhccC----ceEEEecCCccc
Confidence 4556666 7777777777766666555 788999653 246666655442 346778899854
No 153
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=26.53 E-value=4e+02 Score=26.46 Aligned_cols=87 Identities=9% Similarity=0.026 Sum_probs=55.1
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHhhC--CCccccCCCceeeccCCCCHHHHHHHHHH--cC-CCCCCceeeeeceecCCCC
Q 021352 22 MQCKPLSEQEVRVLCEKAKEILMDE--SNVQPVKSPVTICGDIHGQFHDLAELFRI--GG-KCPDTNYLFMGDYVDRGYY 96 (313)
Q Consensus 22 ~~~~~~~~~~~~~ll~~~~~~l~~e--~~~~~~~~~i~viGDiHG~~~~l~~il~~--~~-~~~~~~~vfLGD~vDrG~~ 96 (313)
.+...+++++...|.+.+.++.... ..+...-.....-.|+|-+...+...+.. .| .....+.+--|++|+.|..
T Consensus 60 ~~~Giip~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~S 139 (464)
T PRK00485 60 AELGLLDAEKADAIVAAADEVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQS 139 (464)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCCC
Confidence 4567899999999988888775431 22222222334578899999877765432 22 1112344546999999988
Q ss_pred cHHHHHHHHHhh
Q 021352 97 SVETVTLLVSLK 108 (313)
Q Consensus 97 s~evl~~l~~lk 108 (313)
+..++.....|.
T Consensus 140 rnD~v~Ta~~L~ 151 (464)
T PRK00485 140 SNDTFPTAMHIA 151 (464)
T ss_pred chhHHHHHHHHH
Confidence 877766655554
No 154
>PRK14066 exodeoxyribonuclease VII small subunit; Provisional
Probab=24.43 E-value=77 Score=23.16 Aligned_cols=42 Identities=17% Similarity=0.018 Sum_probs=32.0
Q ss_pred CCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCc
Q 021352 7 PSNSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNV 49 (313)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~e~~~ 49 (313)
+++++..|+++++++-++ .++-++...+++++.++.+.-...
T Consensus 6 fEeal~~LE~IV~~LE~g-~l~Leesl~lyeeG~~L~k~C~~~ 47 (75)
T PRK14066 6 FETALKKLEEVVKKLEGG-ELSLDDSLKAFEEGVKHAAFCSKK 47 (75)
T ss_pred HHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345677889999988765 688888898888888877665443
No 155
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=24.14 E-value=2.4e+02 Score=27.21 Aligned_cols=95 Identities=17% Similarity=0.175 Sum_probs=54.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCC-CCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHH
Q 021352 26 PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIH-GQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLL 104 (313)
Q Consensus 26 ~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiH-G~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l 104 (313)
-++.+++.+-++....+-.+.. +. ....+.+|=|-+ .+.+++.++|+.+...+..+++++|+...-|..+.+.-..+
T Consensus 270 Gi~~~~i~~~l~~~~~~~gR~e-~~-~~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l 347 (417)
T TIGR01143 270 GIPLEEIAEGLAELKLVKGRFE-IQ-TKNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEV 347 (417)
T ss_pred CCCHHHHHHHHHhCCCCCCcee-EE-cCCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHH
Confidence 3666666655544332211111 22 234578888855 48999999998775433456778999977777776655555
Q ss_pred HHhhhhCCCcEEEEcCCc
Q 021352 105 VSLKVRYPQRITILRGNH 122 (313)
Q Consensus 105 ~~lk~~~p~~v~~lrGNH 122 (313)
........-..+++-|..
T Consensus 348 ~~~~~~~~~d~vi~~g~~ 365 (417)
T TIGR01143 348 GRYANSLGIDLVFLVGEE 365 (417)
T ss_pred HHHHHHcCCCEEEEECHH
Confidence 444433331244444543
No 156
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=23.49 E-value=1e+02 Score=28.86 Aligned_cols=59 Identities=17% Similarity=0.143 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHHHhhCCCcccc--CCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeece
Q 021352 28 SEQEVRVLCEKAKEILMDESNVQPV--KSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDY 90 (313)
Q Consensus 28 ~~~~~~~ll~~~~~~l~~e~~~~~~--~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~ 90 (313)
+.+++.+-+.+.++.. .-..+-+. ...|-.++|+=|+=..|.++-+.. +.+.+||+||.
T Consensus 2 ~~~~~~~~I~~lk~e~-~~~ivah~y~~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~ 62 (310)
T TIGR00550 2 SRDNLVEAILRLKKEL-NAVILAHYYQKDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVH 62 (310)
T ss_pred ChHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCc
Confidence 3445555555555443 22222233 456888999999888888877765 56779999995
No 157
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=23.42 E-value=2.3e+02 Score=23.84 Aligned_cols=67 Identities=13% Similarity=0.072 Sum_probs=43.2
Q ss_pred CCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEEEcCCcc
Q 021352 54 SPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHE 123 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (313)
.++++++. |+...+...++..|+...-..++..|-+.++....+++..++..-...|.++++ -|.+.
T Consensus 109 ~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~-vgD~~ 175 (198)
T TIGR01428 109 YRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF-VASNP 175 (198)
T ss_pred CeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE-EeCCH
Confidence 56888887 566778888888887544445666666666665667766665544345666654 45444
No 158
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=23.33 E-value=2e+02 Score=25.53 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=41.3
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCC------CCHHHHHHHHHHcCCCCCCceeeeece
Q 021352 23 QCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIH------GQFHDLAELFRIGGKCPDTNYLFMGDY 90 (313)
Q Consensus 23 ~~~~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiH------G~~~~l~~il~~~~~~~~~~~vfLGD~ 90 (313)
++..++..+..+.++++.+++.+... ..+++.||+- ..+..+.++++... ...++.-|+-
T Consensus 34 ~Gi~~P~~~~~~~l~rl~~li~~~~~-----d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~---~~v~~V~GNH 99 (225)
T TIGR00024 34 QGVMVPGFQFREIIERALSIADKYGI-----EALIINGDLKHEFKKGLEWRFIREFIEVTF---RDLILIRGNH 99 (225)
T ss_pred cCCcCChhHHHHHHHHHHHHHhhcCC-----CEEEEcCccccccCChHHHHHHHHHHHhcC---CcEEEECCCC
Confidence 45568888888899999888766543 4689999986 33556666776543 2445556775
No 159
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=23.21 E-value=4.9e+02 Score=22.41 Aligned_cols=75 Identities=19% Similarity=0.274 Sum_probs=51.5
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCC--------------------------
Q 021352 26 PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKC-------------------------- 79 (313)
Q Consensus 26 ~~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~-------------------------- 79 (313)
.++++++.+-+.+..+...++-.= ...++||=++|++-=+-.+++.+.++
T Consensus 11 Lisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kD 86 (178)
T COG0634 11 LISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKD 86 (178)
T ss_pred eeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecc
Confidence 588999999888887776665432 56789999999988666666554421
Q ss_pred -----CCCceeeeeceecCCCCcHHHHHHH
Q 021352 80 -----PDTNYLFMGDYVDRGYYSVETVTLL 104 (313)
Q Consensus 80 -----~~~~~vfLGD~vDrG~~s~evl~~l 104 (313)
...+++++=|++|-|--=..+.+++
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l 116 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLL 116 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHH
Confidence 1345778999999886333344433
No 160
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=23.03 E-value=1.1e+02 Score=20.53 Aligned_cols=36 Identities=25% Similarity=0.294 Sum_probs=27.4
Q ss_pred CCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhh
Q 021352 9 NSHGNLDEQIAQLMQCKPLSEQEVRVLCEKAKEILMD 45 (313)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~~ 45 (313)
+++..|+.+++++-++ .++-++...+.+++.+.++.
T Consensus 3 e~~~~Le~Iv~~Le~~-~~sLdes~~lyeeg~~l~~~ 38 (53)
T PF02609_consen 3 EAMERLEEIVEKLESG-ELSLDESLKLYEEGMELIKK 38 (53)
T ss_dssp HHHHHHHHHHHHHHTT--S-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 4567889999998875 68889999999888877654
No 161
>PF06861 BALF1: BALF1 protein; InterPro: IPR010677 Epstein-Barr virus (strain GD1) (HHV-4), a human tumour DNA virus and a prominent member of gamma-herpesviruses, encodes homologues of cellular antiapoptotic viral Bcl-2 proteins BALF1 and BHRF1. They protect the virus from apoptosis in its host cell during virus synthesis [, ]. The virus infects B lymphocytes to establish a latent infection and yield proliferating, growth-transformed B cells in vitro. Bcl-2 genes are essential for the initial evasion of apoptosis which allows it to establish a latent infection or cause cellular transformation, or both []. Bcl-2 family proteins can inhibit or induce programmed cell death in part by counteracting the activity of other BCL-2 family members. BALF1, inhibits the antiapoptotic activity of EBV BHRF1 and of KSBcl-2 in several transfected cell lines. BALF1 fails, however, to inhibit the cellular BCL-2 family member, BCL-x(L). Thus, BALF1 acts as a negative regulator of the survival function of BHRF1, similar to the counterbalance observed between cellular BCL-2 family members [].
Probab=21.96 E-value=1.5e+02 Score=25.30 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=51.8
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCCceeeccCCCCHHHHHHHHHHcCCCCCCceeeeeceecCCCCcHHHHHHHHH
Q 021352 27 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVS 106 (313)
Q Consensus 27 ~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGDiHG~~~~l~~il~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 106 (313)
.++.-+..|+++.++. ......++-......||-|+....++.+++..-. -|.++.+=+....+
T Consensus 53 ~~E~lL~~LVk~~iKk--~~~~~~elv~~~~~~~~~h~~iq~l~~iir~~Y~--------------D~~D~~~rL~~tLa 116 (182)
T PF06861_consen 53 TEEALLCWLVKQSIKK--NFKQLAELVCQPSHNADKHAHIQWLMSIIRAVYR--------------DHYDSWSRLCATLA 116 (182)
T ss_pred cHHHHHHHHHHHHHHH--HHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHh--------------chhhHHHHHHHHHH
Confidence 4455666777766544 3334455666678999999999999999987632 24455555555555
Q ss_pred hhhhCCCcEEEEcCCcchhh
Q 021352 107 LKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~~ 126 (313)
+-..| -++.+.+-||...
T Consensus 117 ~a~~y--~~~~l~~d~e~~s 134 (182)
T PF06861_consen 117 YASMY--AMRNLLNDHENAS 134 (182)
T ss_pred HHHHH--HHHHhcCchHHHH
Confidence 44433 1345677788653
No 162
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=21.50 E-value=3.4e+02 Score=26.92 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCCceeecc-CCCCHHHHHHHHHHcCCCCCCc-eeeeeceecCCCCcHHHHHHH
Q 021352 27 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGD-IHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLL 104 (313)
Q Consensus 27 ~~~~~~~~ll~~~~~~l~~e~~~~~~~~~i~viGD-iHG~~~~l~~il~~~~~~~~~~-~vfLGD~vDrG~~s~evl~~l 104 (313)
++.+++..-+++.+.+-.+.. .......+.+|-| .-++.+.+...++.....+..+ ++.|||+..=|..+.++-.-+
T Consensus 300 ~~~e~i~~~L~~~~~~~gR~~-~~~~~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v 378 (451)
T COG0770 300 LDLEEIAAGLKELKPVKGRLE-VILLANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEV 378 (451)
T ss_pred CCHHHHHHHHHhcCCCCccce-eEecCCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHH
Confidence 677777666665543321111 1223334455555 5679999999998877655555 789999999999888877776
Q ss_pred HHhhhhCCCcEEEEcCC
Q 021352 105 VSLKVRYPQRITILRGN 121 (313)
Q Consensus 105 ~~lk~~~p~~v~~lrGN 121 (313)
...-....-..+++-|.
T Consensus 379 ~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 379 GEYAVEAGIDLVFLVGE 395 (451)
T ss_pred HHHHHhcCceEEEEEcc
Confidence 66555432346677787
No 163
>TIGR00758 UDG_fam4 uracil-DNA glycosylase, family 4. This well-conserved family of proteins is about 200 residues in length and homologous to the N-terminus of the DNA polymerase of phage SPO1 of Bacillus subtilis. The member from Thermus thermophilus HB8 is known to act as uracil-DNA glycosylase, an enzyme of DNA base excision repair. Its appearance as a domain of phage DNA polymerases could be consistent with uracil-DNA glycosylase activity.
Probab=20.48 E-value=4.5e+02 Score=22.00 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=43.4
Q ss_pred cCCCceeeccCCCCH-------------HHHHHHHHHcCCCCCCceeeeecee------cCCCCcHH---HHHHHHHhhh
Q 021352 52 VKSPVTICGDIHGQF-------------HDLAELFRIGGKCPDTNYLFMGDYV------DRGYYSVE---TVTLLVSLKV 109 (313)
Q Consensus 52 ~~~~i~viGDiHG~~-------------~~l~~il~~~~~~~~~~~vfLGD~v------DrG~~s~e---vl~~l~~lk~ 109 (313)
.+++|++||+-=|.- .-|.++|+.+|+.+.+.|+- .++ +|-|...| |..++...-.
T Consensus 20 ~~A~im~VgeaPg~~e~~~g~pf~g~sG~~L~~~l~~~gl~~~~vy~t--~~~kc~P~~~r~P~~~Ei~~c~~~l~~eI~ 97 (173)
T TIGR00758 20 PDANIMFVGEAPGREEDRKGRPFVGRAGKLLDEMLAAIGLSRENVYIT--NVVKCRPPNNRDPTPEEVEACAPYLVKQIE 97 (173)
T ss_pred CCCCEEEEeCCCCccccccCCCCcChHHHHHHHHHHHcCCCcccEEEe--ccccccCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 468899998654422 35667888889877654442 222 45555544 5555544333
Q ss_pred hCCCcEEEEcCCcchh
Q 021352 110 RYPQRITILRGNHESR 125 (313)
Q Consensus 110 ~~p~~v~~lrGNHE~~ 125 (313)
.-..+++++.|+--..
T Consensus 98 ~v~P~~Iv~lG~~a~~ 113 (173)
T TIGR00758 98 LIRPKVIICLGRTAAQ 113 (173)
T ss_pred hcCCCEEEEECHHHHH
Confidence 3334688998986654
No 164
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=20.04 E-value=1.7e+02 Score=22.69 Aligned_cols=64 Identities=19% Similarity=0.263 Sum_probs=39.4
Q ss_pred CceeeccCCCCHHHHHHHHHHcCCCC-----------------CCceeeeeceecCCCCcHHHHHHHHHhhhhCCCcEEE
Q 021352 55 PVTICGDIHGQFHDLAELFRIGGKCP-----------------DTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITI 117 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~il~~~~~~~-----------------~~~~vfLGD~vDrG~~s~evl~~l~~lk~~~p~~v~~ 117 (313)
||.||.|=-....+|..+|+-+|... ...+|.+|+.- .....+..+...+|.-=++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 35555555555556666666554321 12234455532 6667777777788877788
Q ss_pred EcCCcchh
Q 021352 118 LRGNHESR 125 (313)
Q Consensus 118 lrGNHE~~ 125 (313)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 99999876
Done!