Your job contains 1 sequence.
>021355
MDEFGNPLTLLDFIDDPNFDQFIDLIRGENEDPLASFDCDLINGCFADTQFIGSAQDDVF
GHFNGTAAGTMVSDDLTFILNSSFPDLDGDMKGEHREEENNGDDSSGATRTATTASTRNK
KADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA
EIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSR
GQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVKDCEQNMNLPNLRLWVTGAL
LNQGFDVVTPFST
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021355
(313 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 688 9.2e-68 1
UNIPROTKB|Q7XVB7 - symbol:OSJNBa0072D21.7 "OSJNBa0072D21.... 138 1.5e-22 3
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 213 9.0e-16 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 175 2.4e-15 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 178 9.8e-14 2
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 176 3.0e-13 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 194 5.8e-13 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 182 3.8e-12 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 168 4.1e-12 2
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 183 1.1e-11 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 180 3.3e-11 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 177 8.0e-11 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 173 2.6e-10 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 167 1.2e-09 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 163 1.5e-09 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 167 1.5e-09 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 160 1.5e-09 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 163 3.4e-09 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 150 8.0e-09 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 153 1.8e-08 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 150 3.1e-08 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 153 3.2e-08 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 148 4.7e-08 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 150 5.9e-08 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 149 5.9e-08 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 146 8.8e-08 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 147 9.2e-08 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 148 1.0e-07 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 138 1.3e-07 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 147 1.8e-07 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 143 2.0e-07 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 142 2.1e-07 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 123 2.7e-07 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 141 2.9e-07 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 142 3.0e-07 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 144 5.0e-07 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 137 5.8e-07 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 131 6.0e-07 2
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 139 6.3e-07 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 138 6.6e-07 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 138 1.1e-06 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 108 1.4e-06 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 139 1.5e-06 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 125 1.8e-06 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 136 3.7e-06 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 134 3.8e-06 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 136 4.4e-06 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 100 5.4e-06 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 134 5.5e-06 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 132 6.0e-06 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 128 8.3e-06 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 131 9.8e-06 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 124 1.1e-05 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 121 1.7e-05 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 129 1.7e-05 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 128 2.1e-05 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 126 3.9e-05 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 127 3.9e-05 2
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 125 4.4e-05 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 122 4.6e-05 2
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 125 4.8e-05 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 126 5.0e-05 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 123 5.0e-05 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 123 6.7e-05 1
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 123 6.8e-05 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 104 9.5e-05 2
TAIR|locus:2012146 - symbol:RGE1 "AT1G49770" species:3702... 119 0.00011 1
TAIR|locus:2135169 - symbol:bHLH11 "AT4G36060" species:37... 118 0.00012 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 119 0.00015 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 120 0.00017 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 112 0.00017 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 118 0.00019 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 117 0.00030 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 116 0.00043 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 113 0.00049 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 114 0.00055 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 115 0.00061 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 109 0.00063 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 112 0.00087 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 112 0.00094 1
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 158/319 (49%), Positives = 207/319 (64%)
Query: 6 NPLTLLDFIDDPNFDQFIDLIRGEN----EDPLASFDCD-LING-CFAD-TQFIGSAQDD 58
N L L +F+ DPNFDQFI+LIRG++ E+P+ FD L N CF D QFI + DD
Sbjct: 12 NDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFIDENQFIPTPVDD 71
Query: 59 VFGHFNGTAAGTMVSDDLTFILNSSFPDLDGDMK---GEHREEE-NNGDDXXXXXXXXXX 114
+F DL + SF DGD GE EE+ N+GDD
Sbjct: 72 LFDEL----------PDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATTTNNDG 121
Query: 115 XXXXNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQ 174
K DRSRTL+SER+RRG+MK+KLY LR+LVPNI+KMDKASI+GDAV Y+QELQ Q
Sbjct: 122 TRKT--KTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQ 179
Query: 175 VRKLKAEIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYL 234
+KLK++IA LE S+ + QE +K+Q G P KKI+Q+DV QVEE+ FY+
Sbjct: 180 AKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFYV 239
Query: 235 RLVSSRGQGVAVSLYKALESLTSFDVQNFNFAT-EPERLVLTFNLNVKDCEQNMNLPNLR 293
RLV ++G+GVA SLYK+LESLTSF VQN N ++ P+ +LT+ L+ EQ++NLPNL+
Sbjct: 240 RLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLPNLK 299
Query: 294 LWVTGALLNQGFDVVTPFS 312
LW+TG+LLNQGF+ + F+
Sbjct: 300 LWITGSLLNQGFEFIKSFT 318
>UNIPROTKB|Q7XVB7 [details] [associations]
symbol:OSJNBa0072D21.7 "OSJNBa0072D21.7 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG236355 EMBL:AL662977 ProteinModelPortal:Q7XVB7
Gramene:Q7XVB7 Uniprot:Q7XVB7
Length = 383
Score = 138 (53.6 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 33/74 (44%), Positives = 43/74 (58%)
Query: 88 DGDMKGEHREEENNGDDXXXXXXXXXXXXXXNKKADRSRTLVSERKRRGKMKEKLYGLRA 147
DGD G+ +G+ K+ DRS+T+VSERKRR +MKEKLY LRA
Sbjct: 100 DGDGDGDGDVSPRDGE----LGDGDGDNSATRKRRDRSKTIVSERKRRVRMKEKLYELRA 155
Query: 148 LVPNISKMDKASII 161
LVPNI+K+ +I
Sbjct: 156 LVPNITKVRTQCLI 169
Score = 121 (47.7 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 31/99 (31%), Positives = 55/99 (55%)
Query: 218 KIMQIDVFQVEERRFYLRL------VSSRGQG--VAVSLYKALESLTSFDVQNFNFATEP 269
++ + QV E RF++ + ++RG G VA + A+ESL+ F V++ P
Sbjct: 276 RVAHVGAAQVGEGRFFVTVECEPAAAAARGGGGGVAAPVCAAVESLSCFTVESSTVGCSP 335
Query: 270 ERLVLTFNLNVKDCEQNMNLPN---LRLWVTGALLNQGF 305
+R+V T L V + E++++ + ++LWV ALL +GF
Sbjct: 336 DRVVATLTLKVSEAEEDVSAISECTVKLWVMAALLKEGF 374
Score = 105 (42.0 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 154 KMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSMA-----GSEKNQEPIQKPKKSQVL 208
+MDKASII DAV Y+++LQ RKLK E+A+LE + S Q P ++P++
Sbjct: 193 QMDKASIIADAVVYVKDLQAHARKLKEEVAALEEARPIRPPPPSAAAQRPQRQPRRVAAA 252
Query: 209 SGNL 212
+ L
Sbjct: 253 AAQL 256
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 213 (80.0 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 57/161 (35%), Positives = 94/161 (58%)
Query: 124 RSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE-- 181
+S+ L SERKRR ++ + +YGLRA+VP I+K++K I DAV Y+ EL ++ +KL+ E
Sbjct: 262 KSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELK 321
Query: 182 -IASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSR 240
I +E +E+ Q I P+ +V S + + + K ++I+V + ER F +R+V
Sbjct: 322 GINEMECKEIAAEE-QSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRVVQEH 380
Query: 241 GQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVK 281
Q L +A++ L ++ + NF T + V+T LNVK
Sbjct: 381 KQDGFKRLIEAVD-LCELEIIDVNF-TRLDLTVMTV-LNVK 418
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 175 (66.7 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 34/62 (54%), Positives = 49/62 (79%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
S+ +VSER RR K+ ++L+ LR++VPNISK+DKAS+I D++ Y+QEL Q + L+AEI
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 185 LE 186
LE
Sbjct: 113 LE 114
Score = 63 (27.2 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 27/110 (24%), Positives = 47/110 (42%)
Query: 171 LQMQVRKLKAEIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEER 230
L+ VR A E + N + K K S +Q +++++ V + E+
Sbjct: 120 LENPVRDYDCNFA--ETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEK 177
Query: 231 RFYLRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNV 280
+ + S+ + V L K LESL + ++ NF++ RL T L V
Sbjct: 178 TVVVCITCSKKRETMVQLCKVLESL-NLNILTTNFSSFTSRLSTTLFLQV 226
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 178 (67.7 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 32/76 (42%), Positives = 57/76 (75%)
Query: 121 KADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA 180
K +++ L++ER+RR K+ ++LY LR+LVP I+K+D+ASI+GDA++Y++ELQ + ++L+
Sbjct: 309 KGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQD 368
Query: 181 EIASLEYSMAGSEKNQ 196
E+ + GS + Q
Sbjct: 369 ELEENSETEDGSNRPQ 384
Score = 65 (27.9 bits), Expect = 9.8e-14, Sum P(2) = 9.8e-14
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 221 QIDVFQVEERRFYLRLVSSRGQGVAVSLYKALESLTSFDVQNFN 264
Q+DV Q++ R F+++++ G L +AL+SL +V N N
Sbjct: 429 QVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSL-GLEVTNAN 471
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 176 (67.0 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 43/166 (25%), Positives = 93/166 (56%)
Query: 124 RSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIA 183
+S L +ER+RR K+ +L LR+ VP ++ M KASI+ DA++Y+ ELQ V+ L
Sbjct: 30 KSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFH 89
Query: 184 SLEYSMAGSEKNQ-EPIQKPKKSQVLSGNLQPICKKI---MQIDVFQVEERRFYLRLVSS 239
+E + ++ Q +P+ KP +V + +L KK+ + + ++ ER+F+L++++
Sbjct: 90 EMEEAPPEIDEEQTDPMIKP---EVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITE 146
Query: 240 RGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVKD-CE 284
+ G+ + + L F++ + + T ++++ ++ ++ C+
Sbjct: 147 KRDGIFTKFMEVMRFL-GFEIIDISLTTSNGAILISASVQTQELCD 191
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 194 (73.4 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 65 GTAAGTMVSDDLTFILNSSFPD-LDGDMKGE---HREEENNGDDXXXXXXXXXXXXXXN- 119
G AG + +D +L+ D L D G E+ G+D
Sbjct: 266 GAGAGALSADGADMVLDDGDDDGLSIDASGGLNYDSEDARGGEDSGAKKESNANSTVTGD 325
Query: 120 ----KKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQV 175
KK ++ L++ER+RR K+ ++LY LR++VP ISKMD+ASI+GDA+ YL+EL ++
Sbjct: 326 GKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKI 385
Query: 176 RKLKAEIAS--LEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIM--------QIDVF 225
L+ E+ S S+ + + P+ P + S + IC + +++V
Sbjct: 386 NDLQNELESSPATSSLPPTPTSFHPLT-PTLPTLPSRIKEEICPSALPSPTGQQPRVEVR 444
Query: 226 QVEERRFYLRLVSSRGQGVAVSLYKALESLTSFDVQ 261
E R + + +R G+ +S +A+E L DVQ
Sbjct: 445 LREGRAVNIHMFCARRPGLLLSAMRAVEGL-GLDVQ 479
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 182 (69.1 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 35/68 (51%), Positives = 52/68 (76%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
++ ++ ER RR K+ EKLY LR++VPNI+KMDKASII DA+ Y+Q LQ + +++ E+A+
Sbjct: 92 NKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVAA 151
Query: 185 LEYSMAGS 192
LE + A S
Sbjct: 152 LESAAAAS 159
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 168 (64.2 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 46/140 (32%), Positives = 63/140 (45%)
Query: 48 DTQFIGSAQDDVFGHFNGTA-----AGTMVSDDLTFILNSSFPDLDGDMKGEHREEENNG 102
D F+G D G A AG VS+ + G E E
Sbjct: 202 DDPFLGGGGGDAVGDEAAAAGAWPYAGMAVSEPSVAVAQEQMQHAAGGGVAESGSEGRKL 261
Query: 103 DDXXXXXXXXXXXXXXNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIG 162
K + + L +ERKRR K+ LY LR+LVPNI+KMD+ASI+G
Sbjct: 262 HGGDPEDDGDGEGRSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILG 321
Query: 163 DAVSYLQELQMQVRKLKAEI 182
DA+ Y+ LQ QV++L+ E+
Sbjct: 322 DAIDYIVGLQKQVKELQDEL 341
Score = 61 (26.5 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 221 QIDVFQVEERRFYLRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNV 280
Q++V QV+ +++++ G V L A+ +L +V N N T ++ F + V
Sbjct: 417 QLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNAL-GLEVINVNVTTYKTLVLNVFRVMV 475
Query: 281 KDCEQNMNLPNLR 293
+D E + +R
Sbjct: 476 RDSEVAVQADRVR 488
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 183 (69.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 57/208 (27%), Positives = 101/208 (48%)
Query: 64 NGTAAGTMVSDDLTFILNSSFPDLDG-DMKG-EHREEENNGDDXXXXXXXXXXXXXXNKK 121
+G+ G S + + D G ++ G + +E N KK
Sbjct: 243 SGSKMGNSESSGMRRFSDDGDMDETGIEVSGLNYESDEINESGKAAESVQIGGGGKGKKK 302
Query: 122 ADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
++ L++ER+RR K+ ++LY LR++VP ISKMD+ASI+GDA+ YL+EL ++ L E
Sbjct: 303 GMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 362
Query: 182 IASLEY-SMAGSEKNQEPIQK-PK------KSQVLSGNLQPICKKIMQIDVFQVEERRFY 233
+ S S+ + + P+ P+ K ++ +L + +++V E R
Sbjct: 363 LESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVN 422
Query: 234 LRLVSSRGQGVAVSLYKALESLTSFDVQ 261
+ + R G+ ++ KAL++L DVQ
Sbjct: 423 IHMFCGRRPGLLLATMKALDNL-GLDVQ 449
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 180 (68.4 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 36/94 (38%), Positives = 64/94 (68%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSM 189
+ER+RR K+ ++ Y LR++VPNISKMDKAS++GDA+SY++ELQ +V+ ++ E + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458
Query: 190 AGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQID 223
SE N +++ + + + N + + + I +D
Sbjct: 459 --SESNTITVEESPEVDIQAMNEEVVVRVISPLD 490
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 177 (67.4 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 88 DGDMKGEHREEENNGDDXXXXXXXXXXXXXXNKKADRSRTLVSERKRRGKMKEKLYGLRA 147
DG+ GE + D+ N +A+ + +ER+RR K+ ++ Y LR+
Sbjct: 396 DGEGGGEWADAVG-ADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRS 454
Query: 148 LVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYS 188
+VPNISKMDKAS++GDAVSY+ EL +++ ++AE L YS
Sbjct: 455 VVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLGYS 495
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 173 (66.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/130 (34%), Positives = 75/130 (57%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSM 189
+ER+RR K+ ++ Y LRA+VPN+SKMDKAS++GDA++Y+ EL+ +V K ++E ++ +
Sbjct: 456 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQL 515
Query: 190 AGSEKNQEPIQKPKKSQVLSGNLQPICKKI----MQIDVFQVEERRFYLRLVSSRGQGVA 245
E E +K+ G++ C I M+I+V ++ +R+ SS+ A
Sbjct: 516 --EEVKLE--LAGRKASASGGDMSSSCSSIKPVGMEIEV-KIIGWDAMIRVESSKRNHPA 570
Query: 246 VSLYKALESL 255
L AL L
Sbjct: 571 ARLMSALMDL 580
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 36/98 (36%), Positives = 61/98 (62%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSM 189
+ER+RR K+ ++ Y LRA+VPN+SKMDKAS++GDA+SY+ EL+ ++++ +++ ++ +
Sbjct: 419 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKL 478
Query: 190 AGSEK--NQEPIQKPKKSQVLSGNLQPICKKI-MQIDV 224
G K N + + S N I M+IDV
Sbjct: 479 DGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDV 516
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 42/135 (31%), Positives = 77/135 (57%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
S+ L++ER+RR ++ ++L LR++VP ISKMD+ SI+GD + Y++EL +++ L+ E A+
Sbjct: 195 SKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAAT 254
Query: 185 LEYSMAGSEKNQEPIQ----KPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSR 240
+ S + +E N ++ KP S SG P+ + + +V + E + + +
Sbjct: 255 GDSSSSSTE-NLSMLKLNTLKPPPSSS-SGEETPLIRNSTRFEVERRENGSTRIEMACAA 312
Query: 241 GQGVAVSLYKALESL 255
+ S ALE+L
Sbjct: 313 IPELLPSTLAALEAL 327
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 30/68 (44%), Positives = 51/68 (75%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSM 189
+ER+RR K+ ++ Y LRA+VPN+SKMDKAS++GDA+SY+ EL+ ++ L+ + +L+ M
Sbjct: 528 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETDKETLQSQM 587
Query: 190 AGSEKNQE 197
+K ++
Sbjct: 588 ESLKKERD 595
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 160 (61.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/69 (46%), Positives = 51/69 (73%)
Query: 122 ADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
A S+ + ER RR ++ EKL+ LRA+VP I+KMDKASI+ DA++++++LQ + R+L E
Sbjct: 93 AASSKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDE 152
Query: 182 IASLEYSMA 190
I+ L+ + A
Sbjct: 153 ISVLQSAAA 161
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 28/57 (49%), Positives = 47/57 (82%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLE 186
+ER+RR K+ ++ Y LRA+VPN+SKMDKAS++GDA+SY+ EL+ +++K +++ L+
Sbjct: 420 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQ 476
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 150 (57.9 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 50/200 (25%), Positives = 94/200 (47%)
Query: 99 ENNGDDXXXXXXXXXXXXXXNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKA 158
E +GDD K +S+ L +ER+RRG++ ++ LRA+VP I+KM K
Sbjct: 38 EEDGDDGEEEQQQQQAAAAAMGKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKE 97
Query: 159 SIIGDAVSYLQELQMQVRKLKAEIASLE---YSMAGSEKNQEPIQKPKKSQVLSGNLQPI 215
+ + DA+ +++ LQ +V +L+ ++ + GS E P ++ G
Sbjct: 98 ATLSDAIEHIKNLQNEVLELQRQLGDSPGEAWEKQGSASCSESFV-PTENAHYQG----- 151
Query: 216 CKKIMQIDVFQVEERRFYLRLVSSRGQGVAVSLYKALESLTSFDVQ--NFNFATEPERLV 273
Q+++ + ++ L++ ++ G+ K LE+L S+ VQ + N +
Sbjct: 152 -----QVELISLGSSKYNLKIFWTKRAGLFT---KVLEALCSYKVQVLSLNTISFYGYAE 203
Query: 274 LTFNLNVKDCEQNMNLPNLR 293
F + VK EQ++ + LR
Sbjct: 204 SFFTIEVKG-EQDVVMVELR 222
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 153 (58.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 40/131 (30%), Positives = 75/131 (57%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
S+ L++ER+RR ++ ++L LR++VP ISKMD+ SI+GDA+ Y++EL ++ KL+ E
Sbjct: 177 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQE 236
Query: 185 LEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQGV 244
L G+ N + + L+ N +P+ + + ++ + +E + + S G+
Sbjct: 237 L-----GNSNNSHHSKLFGDLKDLNAN-EPLVRNSPKFEIDRRDEDT-RVDICCSPKPGL 289
Query: 245 AVSLYKALESL 255
+S LE+L
Sbjct: 290 LLSTVNTLETL 300
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 150 (57.9 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 41/161 (25%), Positives = 82/161 (50%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE---IAS 184
+++ERKRR K+ E+L L AL+P + K DKA+++ DA+ +L++LQ +V+KL+ E
Sbjct: 134 VLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVVTKK 193
Query: 185 LEYSMAGSEKNQEPIQKPKKSQVLSGNL-QPICKKIMQIDVFQ---------VEERRFYL 234
++ S+ +++Q + S + + P+ ++ +F+ V +R +
Sbjct: 194 MDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRDLLI 253
Query: 235 RLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLT 275
R+ + +G + + +LE V +F LV+T
Sbjct: 254 RVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVIT 294
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 153 (58.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 27/63 (42%), Positives = 46/63 (73%)
Query: 119 NKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
N + + + +ER+RR K+ ++ Y LRA+VPNISKMDKAS++ DA++Y+ ++Q ++R
Sbjct: 313 NGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVY 372
Query: 179 KAE 181
+ E
Sbjct: 373 ETE 375
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 148 (57.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 37/142 (26%), Positives = 77/142 (54%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIA--SL 185
+++ERKRR K+ ++ L AL+P + KMDKAS++GDA+ +++ LQ V++ + + ++
Sbjct: 128 ILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTM 187
Query: 186 EYSMAGSEKNQ---EPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQ 242
E S+ +K+ + +P S GN + +I+V +V + ++++ + +
Sbjct: 188 E-SVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEV-RVSGKDVLIKILCEKQK 245
Query: 243 GVAVSLYKALESLTSFDVQNFN 264
G + + +E L + N N
Sbjct: 246 GNVIKIMGEIEKL-GLSITNSN 266
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 150 (57.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYS- 188
+E++RR K+ + Y LRA+VP +S+MDKAS++ DAVSY++ L+ ++ L+ EI ++ +
Sbjct: 253 AEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTE 312
Query: 189 ---MAGSEKNQEPI-------QKPKKS 205
+ S N P QKP KS
Sbjct: 313 TDKLDNSSSNTSPSSVEYQVNQKPSKS 339
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 149 (57.5 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 54/192 (28%), Positives = 95/192 (49%)
Query: 121 KADRSRTLVSERKRRGKMKEKLYGLRALVPN--ISKMDKASIIGDAVSYLQELQMQVRKL 178
++ R + ER RR +M L LR+++P+ I + D+ASI+G A+ +++ L+ Q++ L
Sbjct: 189 ESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSL 248
Query: 179 KAEIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVE----ERRFYL 234
+A+ S + S+ N+E I + + +S N K Q ++E E L
Sbjct: 249 EAQKRSQQ-----SDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNL 303
Query: 235 RLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVKDCEQNMNLPNLRL 294
++ +R QG + LE L F V + N T P ++++ N+K E NL +
Sbjct: 304 KIQCTRKQGQLLRSIILLEKLR-FTVLHLNI-TSPTNTSVSYSFNLK-MEDECNLGSADE 360
Query: 295 WVTGALLNQGFD 306
+T A+ Q FD
Sbjct: 361 -ITAAI-RQIFD 370
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 146 (56.5 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 28/65 (43%), Positives = 49/65 (75%)
Query: 119 NKKADR--SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVR 176
NKK + S+ L++ER+RR ++ ++L LR++VP I+KMD+ SI+GDA+ Y++EL ++
Sbjct: 142 NKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKIN 201
Query: 177 KLKAE 181
KL+ +
Sbjct: 202 KLQED 206
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 147 (56.8 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 43/172 (25%), Positives = 81/172 (47%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEY 187
+++ERKRR K+ ++ L +VP + KMDKAS++GDA+ Y+++LQ QV+ L+ E
Sbjct: 183 ILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRPV 242
Query: 188 SMAGSEKNQEPIQKPKKSQVLSGNLQ--PICKKIMQIDVFQVEERRFYLRLVSSRGQGVA 245
A K + N + +I+ +V ER +++ +G
Sbjct: 243 EAAVLVKKSQLSADDDDGSSCDENFDGGEATAGLPEIEA-RVSERTVLVKIHCENRKGAL 301
Query: 246 VSLYKALESLTSFDVQNFN---FATEPERLVL------TFNLNVKDCEQNMN 288
++ +E++ + N N F + + + F+L+VKD + +N
Sbjct: 302 ITALSEVETI-GLTIMNTNVLPFTSSSLDITIMATAGENFSLSVKDIVKKLN 352
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 148 (57.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
S+ L++ER+RR ++ ++L LR++VP ISKMD+ SI+GD + Y++EL +++ L+ EI
Sbjct: 181 SKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEI-- 238
Query: 185 LEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQGV 244
G + + K N + + + + DV + + GV
Sbjct: 239 ------GVTPEELDLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGNTRIEICCPANPGV 292
Query: 245 AVSLYKALESL 255
+S ALE L
Sbjct: 293 LLSTVSALEVL 303
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 138 (53.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
+SE+KRR K+ EK+ L+ L+PN +K DKAS++ +A+ YL++LQ+QV+ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 36/107 (33%), Positives = 60/107 (56%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSM 189
+ER RR K+ + Y LRA+VPN+SKMDK S++ DAV Y+ EL+ + ++ E ++E
Sbjct: 347 AERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQF 406
Query: 190 AGSEK---NQEPIQKPKKSQVLSGNLQPICKKIMQID--VFQVEERR 231
++ + I K + + + I KIM+ D + +VE R+
Sbjct: 407 NELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRK 453
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 143 (55.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 86 DLDGDMKGEHREEENNGDDXXXXXXXXXXXXXXNKKADRSRTL--VSERKRRGKMKEKLY 143
D G++ G + E G K R+ + +SE++RR K+ EK+
Sbjct: 66 DCGGELGG-FCDSEAGGSSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMK 124
Query: 144 GLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS-LEYS-MAGSEKNQEPIQK 201
L++L+PN +K DKAS++ +A+ YL++LQ+QV+ L L S ++G+ EP Q
Sbjct: 125 ALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPSYLSGA---LEPAQA 181
Query: 202 PKKSQVLSGN 211
+ L GN
Sbjct: 182 SQMFAALGGN 191
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/130 (27%), Positives = 75/130 (57%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEY 187
+++ERKRR K+ EK L AL+P + K DK +I+ DA+S +++LQ Q+R LK E +
Sbjct: 121 VLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATRQ 180
Query: 188 --SMAGSEKNQEPI-QKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQGV 244
SM +K++ ++P S S +++ + + +I+ ++ + +R++ + +G
Sbjct: 181 MESMILVKKSKVFFDEEPNLSCSPSVHIE-FDQALPEIEA-KISQNDILIRILCEKSKGC 238
Query: 245 AVSLYKALES 254
+++ +E+
Sbjct: 239 MINILNTIEN 248
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 123 (48.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 120 KKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLK 179
K + +SRT ++ER+RR ++ + L+ L+PN +K +ASI+ D + Y+ ELQ V +LK
Sbjct: 17 KGSKKSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELK 76
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 141 (54.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 25/50 (50%), Positives = 41/50 (82%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
+SE++RR ++ EK+ L++L+PN SK DKAS++ DA+ YL++LQ+QV+ L
Sbjct: 39 LSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 142 (55.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 38/128 (29%), Positives = 71/128 (55%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEY 187
+++ER+RR K+ ++ L ++P + KMDKA+I+GDAV Y++ELQ +V+ L+ E
Sbjct: 169 IIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRP 228
Query: 188 SMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQGVAVS 247
+ K+ ++S G+ + ++ +I+V +V ER +R+ +G+ V
Sbjct: 229 AAMVVRKSS---CSGRQSAAGDGDGEG---RVPEIEV-RVWERSVLVRVQCGNSRGLLVR 281
Query: 248 LYKALESL 255
L +E L
Sbjct: 282 LLSEVEEL 289
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 42/128 (32%), Positives = 72/128 (56%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA--EIASLE 186
+SE+KRR K+ E+ LR+++P+ISK+DK SI+ D + YLQ+LQ +V++L++ E A E
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 187 YSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRF-YLRL-----VSSR 240
+ K ++P + +++ S N +K ++V + E Y L +SS
Sbjct: 468 TRIT-MMKRKKPDDEEERA---SANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSL 523
Query: 241 GQGVAVSL 248
G V + L
Sbjct: 524 GNEVVIEL 531
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 137 (53.3 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
+ER+RR K+ + LRA VP +S+MDKAS++ DAV Y+ EL+ +V +L+AE
Sbjct: 98 AERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAE 149
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 131 (51.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 24/53 (45%), Positives = 43/53 (81%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA 180
++SER+RR K+ E L++LVP+I K+DKASI+ + ++YL+EL+ +V++L++
Sbjct: 190 VMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELES 242
Score = 48 (22.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 68 AGTMVSDDLTFILNSSFPDLDGDMKGEHREEENNG 102
A T+V DDL + + GD K EH+ ++ G
Sbjct: 64 ANTVVIDDLFLAHSDAILPAGGDQKEEHQLGDDLG 98
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 139 (54.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 51/198 (25%), Positives = 94/198 (47%)
Query: 80 LNSSF-PDLDGDMKGEHREEENNGDDXXXXXXXXXXXXXXNKKADRSRTLVSERKRRGKM 138
LNS F P L+ ++ + +E N +++ +++ERKRR K+
Sbjct: 111 LNSIFSPKLEAQVQPHQKSDEFN------RKGTKRAQPFSRNQSNAQDHIIAERKRREKL 164
Query: 139 KEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSMAGSEKNQEP 198
++ L ALVP + KMDKAS++GDA+ +++ LQ +V +L+ + E+ E
Sbjct: 165 TQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ---------KKERRLES 215
Query: 199 IQKPKKSQ-VLSGNLQPI---CKK-IMQIDVFQVEER----RFYLRLVSSRGQGVAVSLY 249
+ KKS+ +L N Q C+ +D+ ++E R ++++ + +G +
Sbjct: 216 MVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIM 275
Query: 250 KALESL----TSFDVQNF 263
+E L T+ V NF
Sbjct: 276 AEIEKLHILITNSSVLNF 293
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 138 (53.6 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 28/65 (43%), Positives = 47/65 (72%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS--L 185
+V+ERKRR K+ ++ L A++P + KMDKA+I+ DA SY++ELQ +++ L+ + A+
Sbjct: 132 VVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAARVT 191
Query: 186 EYSMA 190
E +MA
Sbjct: 192 EAAMA 196
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 45 CFADTQFIGSAQDDVFGHFNGTAAGTMVSDDLTFILNSSFPDLDGDMKGEHR-EEENNGD 103
CF F G ++ + G ++GT VS SS G+ E+ E E G+
Sbjct: 129 CFG---FSGGGNNN---NVQGNSSGTRVS--------SSSVGASGNETDEYDCESEEGGE 174
Query: 104 DXXXXXXXXXXXXXXNKKADRSRTL----VSERKRRGKMKEKLYGLRALVPNISKMDKAS 159
+ R R +SE++RR ++ EK+ L++L+PN +K DKAS
Sbjct: 175 AVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKAS 234
Query: 160 IIGDAVSYLQELQMQVRKL 178
++ +A+ YL++LQ+QV+ L
Sbjct: 235 MLDEAIEYLKQLQLQVQML 253
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 108 (43.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 131 ERKRRGKMKEKLYGLRALVP--NISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
ER RR +M E L LR+L+P + + D+ASIIG V Y++ELQ +R L+A+
Sbjct: 138 ERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAK 190
Score = 72 (30.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 234 LRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVK-DCE 284
L+ VS R G A+ + ALESL S ++ + + T + VL+F + + +CE
Sbjct: 350 LKTVSHRAPGQALKIIAALESL-SLEILHVSICTVDDATVLSFTIKIGIECE 400
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/89 (35%), Positives = 50/89 (56%)
Query: 88 DGDMKGEHREEENNGDDXXXXXXXXXXXXXXNKKADRSRTLVSERKRRGKMKEKLYGLRA 147
D D E EEE+ GD ++ L SER+RR ++ EK+ L+
Sbjct: 311 DIDCHSEDVEEES-GDGRKEAGPSRTGLGSKRSRSAEVHNL-SERRRRDRINEKMRALQE 368
Query: 148 LVPNISKMDKASIIGDAVSYLQELQMQVR 176
L+PN +K+DKAS++ +A+ YL+ LQ+QV+
Sbjct: 369 LIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 125 (49.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
SER+RR ++ EKL L+ L+PN +K DK S++ +A+ YL+ LQ+Q++ L
Sbjct: 21 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 136 (52.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 27/63 (42%), Positives = 45/63 (71%)
Query: 120 KKADRSRTL----VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQV 175
+ RSRT +SER+RR ++ EK+ L+ L+PN +K+DKAS++ +A+ YL+ LQ+QV
Sbjct: 306 RSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQV 365
Query: 176 RKL 178
+ +
Sbjct: 366 QMM 368
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVR 176
+SER+RR ++ EKL L+ LVP+ +K DKASI+ +A+ YL+ LQMQV+
Sbjct: 235 LSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 282
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 136 (52.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYS 188
V E+KRR K+ E+ LR ++P+I+K+DK SI+ D + YLQEL+ +V++L++ S +
Sbjct: 444 VLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTE 503
Query: 189 MAGSE--KNQEPIQKPKKSQVLSGN 211
G+ K ++P +++ N
Sbjct: 504 TRGTMTMKRKKPCDAGERTSANCAN 528
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 100 (40.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 131 ERKRRGKMKEKLYGLRALVPN--ISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
ER RR +M + L LR+L P I + D+ASIIG A+ +++ELQ ++ L+A+
Sbjct: 7 ERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQ 59
Score = 66 (28.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 26/102 (25%), Positives = 43/102 (42%)
Query: 188 SMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQGVAVS 247
S AGS + P + K+ L L C M ++ LR +S R V +
Sbjct: 105 SSAGSSSSISPKDENKQQLQLVAELAACCNSPMADVEARISGANVLLRTLSRRAPPVRI- 163
Query: 248 LYKALESLTSFDVQNFNFATEPERLVLTFNLNVK-DCEQNMN 288
LESL +V + N T + ++ +F L + DC +++
Sbjct: 164 -IALLESL-HLEVLHLNITTMDDTVLYSFVLKIGLDCHLSVD 203
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLK 179
+V+ER+RR K+ EK LR++VP ++KMDK SI+GD ++Y+ L+ +V +L+
Sbjct: 365 VVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 132 (51.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL-KAEIASLEYS 188
SERKRR K+ +++ L+ LVPN SK DKAS++ + + YL++LQ QV + + + S+
Sbjct: 221 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLP 280
Query: 189 MAGSEKNQ 196
MA ++ Q
Sbjct: 281 MAMQQQQQ 288
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 128 (50.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
+ER+RR K+ + LRA VP +S+MDKAS++ DA +Y+ EL+ +V +L+++
Sbjct: 115 AERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLESD 166
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 131 (51.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 24/53 (45%), Positives = 43/53 (81%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA 180
++SER+RR K+KE L+++VP+I K+DKASI+ + ++YL+EL+ +V +L++
Sbjct: 246 VMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELES 298
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/95 (30%), Positives = 53/95 (55%)
Query: 93 GEHREEENNGDDXXXXXXXXXXXXXXNKKADRSRTLVSE------RKRRGKMKEKLYGLR 146
G+ N+ DD +KA +R + S+ RKRR ++ ++L L+
Sbjct: 103 GQSLSSYNSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQ 162
Query: 147 ALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
+LVPN +K+D ++++ DAV Y++ LQ+Q++ L +E
Sbjct: 163 SLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/197 (26%), Positives = 90/197 (45%)
Query: 131 ERKRRGKMKEKLYGLRALVP--NISKMDKASIIGDAVSYLQELQMQVRKLKA-------- 180
ER RR +M E L LR+L P I + D+ASIIG + +++ELQ V+ L++
Sbjct: 7 ERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRRKTLN 66
Query: 181 ------EIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQP-ICKKIMQIDV-FQVEERRF 232
+ ++E S G+ + P + + S + C +V ++
Sbjct: 67 RPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKISGSNV 126
Query: 233 YLRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVKDCEQNMNLPNL 292
LR+VS R G V + LE L SF V + N ++ E ++ F + + E +++L L
Sbjct: 127 VLRVVSRRIVGQLVKIISVLEKL-SFQVLHLNISSMEETVLYFFVVKI-GLECHLSLEEL 184
Query: 293 RLWVTGALLNQGFDVVT 309
L V + ++ V T
Sbjct: 185 TLEVQKSFVSDEVIVST 201
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 86 DLDGDMKGEHRE--EENNGDDXXXXXXXXXXXXXXNKKADRSRTLVSERKRRGKMKEKLY 143
D +G M + E NNG + + +SRT +ER+RR ++ +
Sbjct: 205 DANGGMNVLYFEGANNNNGGFENEILEFNNGVTRKGRGSRKSRTSPTERERRVHFNDRFF 264
Query: 144 GLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLK 179
L+ L+PN +K+D+ASI+G+A+ Y++EL + + K
Sbjct: 265 DLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFK 300
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/79 (31%), Positives = 48/79 (60%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEY 187
++SERKRR K+ + + LR+L+P SK DK +++ +A YL+ L+ ++ +L+ LE
Sbjct: 268 MMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEITELEGTNTKLEK 327
Query: 188 SMAGSEKNQEPIQKPKKSQ 206
+AG + + +++Q
Sbjct: 328 HIAGGGGAADAAMRARRAQ 346
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 126 (49.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 90 DMKGEHREEENNGDDXXXXXXXXXXXXXXNKKADRSRTL----VSERKRRGKMKEKLYGL 145
D K + RE D+ RSR +SERKRR ++ E++ L
Sbjct: 249 DRKRKEREATTT-DETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 307
Query: 146 RALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
+ L+P +K DKAS++ +A+ Y++ LQ+Q++ +
Sbjct: 308 QELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 127 (49.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 64 NGTAAGTMVSDDLTFILNSSFPDLDGDMKG-EHREEENNGDDXXXXXXXXXXXXXXNKKA 122
+G ++G D+ + + D K H +E + D +A
Sbjct: 199 SGGSSGCSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSNQRSGSNRRSRA 258
Query: 123 DRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVR 176
L SER+RR ++ E++ L+ L+P+ SK DKASI+ +A+ YL+ LQ+Q++
Sbjct: 259 AEVHNL-SERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQ 311
Score = 37 (18.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 173 MQVRKLKAEIASLEYSMAGSEKNQEPIQKPKKS 205
MQ + L +S +++Q+P P K+
Sbjct: 390 MQAATQMQPMEMLRFSSPAGQQSQQPSSVPTKT 422
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 22/48 (45%), Positives = 38/48 (79%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVR 176
+SER+RR ++ E++ L+ L+P+ S+ DKASI+ +A+ YL+ LQMQ++
Sbjct: 263 LSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQ 310
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 122 (48.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 121 KADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLK 179
K +ER+RR ++ K LR L PN +K D+ASI+GDA+ Y+ EL V++LK
Sbjct: 260 KGKGKANFATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELK 318
Score = 43 (20.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 10 LLDFIDDPNFDQFIDLIRGENE 31
L IDD FD ++ RG+ E
Sbjct: 236 LFQEIDDRQFDSVLECRRGKGE 257
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 46 FADTQFIGSAQDDVFGHFNGTAAGTMVSDDLTFILNSS 83
F DT G+ D+ G G AA L F +S+
Sbjct: 155 FGDTTLNGTNYLDLNGELTGVAAVPDSGSGLMFASDSA 192
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 43/165 (26%), Positives = 77/165 (46%)
Query: 122 ADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
A + + ++SERKRR K+ E LR+L+P +K DKAS++ A L LQ ++ KL
Sbjct: 285 ATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLER 344
Query: 182 IASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRG 241
+E +AG + + ++ ++ V ++ + +D+ R LR R
Sbjct: 345 NREVEAKLAGEREIENDLRPEERFNVRIRHIPESTSRERTLDL------RVVLRGDIIRV 398
Query: 242 QGVAVSLYKALE-----SLTSFDVQNFNFATEPERLVLTFNLNVK 281
+ + L + L+ SL S + + A +VL +L +K
Sbjct: 399 DDLMIRLLEFLKQINNVSLVSIEARTLARAEGDTSIVLVISLRLK 443
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 126 (49.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 41/149 (27%), Positives = 84/149 (56%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA--EIASL 185
++SER+RR K+ E L+++VP+I K+DKASI+ + ++YL+ L+ +V++L++ E +
Sbjct: 394 VISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESSSEPSHQ 453
Query: 186 EYSMAGSEKNQEPIQKPKKSQV-LSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQGV 244
+ G ++ E K S++ +SG ++ ++V V ++ L + + V
Sbjct: 454 RATETGQQRRCEITGKELVSEIGVSGG-GDAGREHHHVNV-TVTDKVVLLEVQCRWKELV 511
Query: 245 AVSLYKALESLTSFDVQNFNFATEPERLV 273
++ A++SL DV + A+ P+ L+
Sbjct: 512 MTRVFDAIKSLC-LDVLSVQ-ASAPDGLL 538
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 123 (48.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLK 179
+++ERKRR K+ ++ L ++P + KMDKA+I+ DAV Y++E+Q ++ +L+
Sbjct: 194 IIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE 245
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 123 (48.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 52 IGSAQDDVFGHFNGTAAGTMVSDDLTFI-LNSSFPDLDGDMKGEHREEENNGDDXXXXXX 110
+G + + F + + GT S DL+ L + D++ + E NN DD
Sbjct: 159 VGRSTELYFASSSKFSRGT--SRDLSCCSLKRKYGDIEEE---ESTYLSNNSDDESDDAK 213
Query: 111 XXXXXXXXNKKADRSRTL----VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVS 166
R R+ + ERKRR + +K+ L+ L+PN K DKAS++ +A+
Sbjct: 214 TQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIK 273
Query: 167 YLQELQMQVRKL 178
Y++ LQ+QV+ +
Sbjct: 274 YMRTLQLQVQMM 285
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 123 (48.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 66 TAAGTMVSDDLTFILNSSFPDLDGDMKG--EHREEENNGDDXXXXXXXXXXXXXXNKKA- 122
T + ++ + D F LN +G G + + E N G + N+K
Sbjct: 151 TTSSSVAAYDPLFHLNFPLQPPNGSFMGVDQDQTETNQGVNLMYDEENNNLDDGLNRKGR 210
Query: 123 -DRSRTLV-SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLK 179
+ R + +ER+RR K++ L+ L+PN +K D+ASI+G+A+ Y++EL + + K
Sbjct: 211 GSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFK 269
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 104 (41.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 131 ERKRRGKMKEKLYGLRALVP--NISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
ER RR +M E L LR+L+P + + D+ASIIG V Y++ELQ + L+A+
Sbjct: 143 ERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
Score = 58 (25.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 234 LRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVK-DCE 284
L+ VS R G AV + ALE S ++ + +T + V +F + + +CE
Sbjct: 331 LKTVSQRSPGQAVKIIAALEG-RSLEILHAKISTVDDTAVNSFTVKIGIECE 381
>TAIR|locus:2012146 [details] [associations]
symbol:RGE1 "AT1G49770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011807 EMBL:AF488623 IPI:IPI00539453 PIR:D96534
RefSeq:NP_175399.2 UniGene:At.38170 ProteinModelPortal:Q9FXA3
SMR:Q9FXA3 EnsemblPlants:AT1G49770.1 GeneID:841400
KEGG:ath:AT1G49770 TAIR:At1g49770 eggNOG:NOG272533
HOGENOM:HOG000272699 InParanoid:Q9FXA3 OMA:DHEIHIW PhylomeDB:Q9FXA3
ProtClustDB:CLSN2918353 Genevestigator:Q9FXA3 Uniprot:Q9FXA3
Length = 308
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 37/135 (27%), Positives = 64/135 (47%)
Query: 130 SERKRRGKMKEKLYGLRALVPNIS-KMDKASIIGDAVSYLQELQMQVRKLKAE-IASLEY 187
+ER+RR KM++ L AL+P + K DK++I+ +AVS ++ L+ ++KL+ + + L+Y
Sbjct: 77 TERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQY 136
Query: 188 SMAGSEKNQEPI--QKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQGVA 245
S A + P S + L PI + R +L S A
Sbjct: 137 SSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYPRAAFLADQVSSSSAAA 196
Query: 246 VSL-YKALESLTSFD 259
+L Y + + +FD
Sbjct: 197 ANLPYPCNDPIVNFD 211
>TAIR|locus:2135169 [details] [associations]
symbol:bHLH11 "AT4G36060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161588
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022373 EMBL:AF251696
EMBL:AY090362 EMBL:BT000535 IPI:IPI00517622 IPI:IPI00521706
PIR:T05498 RefSeq:NP_195330.2 RefSeq:NP_849566.1 UniGene:At.43990
ProteinModelPortal:Q8W2F2 SMR:Q8W2F2 IntAct:Q8W2F2 PRIDE:Q8W2F2
EnsemblPlants:AT4G36060.1 GeneID:829762 KEGG:ath:AT4G36060
TAIR:At4g36060 eggNOG:NOG307055 HOGENOM:HOG000005852 OMA:PYSASVN
PhylomeDB:Q8W2F2 ProtClustDB:CLSN2690363 Genevestigator:Q8W2F2
Uniprot:Q8W2F2
Length = 286
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 120 KKADRSRTLVSERKRRGKMKEKLYGL-RALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
K+A S+ E+ RR K+KE+ L AL PN K DKAS++ D + L+++ QV +L
Sbjct: 42 KEAVCSQKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRL 101
Query: 179 KAEIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQ 213
KAE +L S E QE + ++ L +++
Sbjct: 102 KAEYETL--SQESRELIQEKSELREEKATLKSDIE 134
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 55/197 (27%), Positives = 83/197 (42%)
Query: 40 DLINGC-FADTQFIGSAQDDVF---------GHFNGTAAGTMVSDDLTFILNSSFPDLDG 89
D + C F DT G DD+F G + TAA T D T D D
Sbjct: 7 DFLEECEFVDTSLAG---DDLFAILESLEGAGEISPTAAST--PKDGTTSSKELVKDQDY 61
Query: 90 DMKGEHREE---ENNGDDXXXXXXXXXXXXXXNKKADRSRT--LVSERKRRGKMKEKLYG 144
+ R++ E ++ NK+ + + + ER RR +M E L
Sbjct: 62 ENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQMNEHLTV 121
Query: 145 LRALVP--NISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSMAGSEKNQEPIQKP 202
LR+L+P + + D+ASIIG V Y+ ELQ ++ L+A+ Y+ S + P +P
Sbjct: 122 LRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPR-VVPSPRP 180
Query: 203 KKSQVLSGNLQPICKKI 219
VLS P+ +I
Sbjct: 181 SPP-VLSPRKPPLSPRI 196
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 21/53 (39%), Positives = 42/53 (79%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA 180
++SER+RR K+ E L++L+P++ K+DKASI+ + ++YL+ L+ +V++L++
Sbjct: 380 VMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELES 432
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 112 (44.5 bits), Expect = 0.00017, P = 0.00017
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVR 176
+ KRR ++ +K+ L+ LVPN SK DKAS++ + + YL++LQ QV+
Sbjct: 9 NNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQ 55
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 47/173 (27%), Positives = 85/173 (49%)
Query: 119 NKKADRSRT--LVSERKRRGKMKEKLYGLRALVPN--ISKMDKASIIGDAVSYLQELQMQ 174
N++ + R + ER RR +M E + LRAL+P I + D+ASI+G A++Y++ L+
Sbjct: 170 NEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQI 229
Query: 175 VRKLKAEIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQP-ICKKIMQIDVFQVEERRFY 233
++ L+++ + + S + +N S L L+ C I +I+ V +
Sbjct: 230 IQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTC--IPKIEA-TVIQNHVS 286
Query: 234 LRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLV-LTFNLNVKD-CE 284
L++ + QG + +LE L V + N T V +FNL ++D C+
Sbjct: 287 LKVQCEKKQGQLLKGIISLEKL-KLTVLHLNITTSSHSSVSYSFNLKMEDECD 338
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
++ER RR K+ E++ L+ LVPN +K DKAS++ + + Y++ LQ+QV+ L
Sbjct: 252 IAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVL 301
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 28/101 (27%), Positives = 48/101 (47%)
Query: 97 EEENNGDDXXXXXXXXXXXXXXNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMD 156
+E NN + +++ +ER+RR + E+ L+ L+P+ SK D
Sbjct: 185 DENNNAQFDSGIIEFSKEIRRKGRGKRKNKPFTTERERRCHLNERYEALKLLIPSPSKGD 244
Query: 157 KASIIGDAVSYLQELQMQVRKLKAEIASLEYSMAGSEKNQE 197
+ASI+ D + Y+ EL+ +V +LK + G KN E
Sbjct: 245 RASILQDGIDYINELRRRVSELKYLVERKR--CGGRHKNNE 283
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 113 (44.8 bits), Expect = 0.00049, P = 0.00049
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
++ER RR ++ E++ L+ LVPN +K DKAS++ + + Y++ LQ+QV+ L
Sbjct: 112 IAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00055
Identities = 25/76 (32%), Positives = 49/76 (64%)
Query: 122 ADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
A RS + +ER+RR ++ L LR+L+PN +K DKAS++ + + +++EL+ Q + A
Sbjct: 106 ASRSHS-EAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAAA 164
Query: 182 IASLEYSMAGSEKNQE 197
A+ +Y G++++ +
Sbjct: 165 AAAGDYH--GNDEDDD 178
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 115 (45.5 bits), Expect = 0.00061, P = 0.00061
Identities = 19/58 (32%), Positives = 39/58 (67%)
Query: 122 ADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLK 179
A+ +++ERKRR K++++ L +VP + K DK S++G + Y+++L+ +V+ L+
Sbjct: 283 ANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKALE 340
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 109 (43.4 bits), Expect = 0.00063, P = 0.00063
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 121 KADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQ 174
+A RS + +ERKRR ++ L LR LVP+ S+MDKA+++G+ V Y+++L+ +
Sbjct: 27 RARRSHS-EAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSE 79
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 112 (44.5 bits), Expect = 0.00087, P = 0.00087
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLK------AEI 182
++ER RR ++ E++ L+ LVPN +K DKAS++ + + Y++ LQ+QV+ L A
Sbjct: 151 IAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS 210
Query: 183 ASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSRGQ 242
S + S AG SQ + + Q+ E+ ++ + +G
Sbjct: 211 VSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGL 270
Query: 243 GVA-VSLYKALESLT 256
+ +SL A+ + T
Sbjct: 271 CLMPISLATAISTAT 285
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 112 (44.5 bits), Expect = 0.00094, P = 0.00094
Identities = 34/110 (30%), Positives = 61/110 (55%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSM 189
SER+RR ++ +++ L+ L+P SK DK SI+ D + +L++LQ QV+ + A+L M
Sbjct: 174 SERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLR-ANLPQQM 232
Query: 190 AGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSS 239
P Q P VLS +Q ++ Q Q ++++F + L+++
Sbjct: 233 ------MIP-QLPPPQSVLS--IQHQQQQQQQQQQQQQQQQQFQMSLLAT 273
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 313 299 0.00095 115 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 80
No. of states in DFA: 595 (63 KB)
Total size of DFA: 193 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.06u 0.11s 27.17t Elapsed: 00:00:02
Total cpu time: 27.06u 0.11s 27.17t Elapsed: 00:00:02
Start: Sat May 11 15:27:02 2013 End: Sat May 11 15:27:04 2013