BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021355
(313 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 281 bits (720), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/319 (50%), Positives = 211/319 (66%), Gaps = 24/319 (7%)
Query: 6 NPLTLLDFIDDPNFDQFIDLIRGEN----EDPLASFDCDLING--CFAD-TQFIGSAQDD 58
N L L +F+ DPNFDQFI+LIRG++ E+P+ FD + CF D QFI + DD
Sbjct: 12 NDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFIDENQFIPTPVDD 71
Query: 59 VFGHFNGTAAGTMVSDDLTFILNSSFPDLDGD---MKGEHREEE-NNGDDSSGATRTATT 114
+F DL + SF DGD GE EE+ N+GDDSS T
Sbjct: 72 LFDEL----------PDLDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATT--TNN 119
Query: 115 ASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQ 174
TR K DRSRTL+SER+RRG+MK+KLY LR+LVPNI+KMDKASI+GDAV Y+QELQ Q
Sbjct: 120 DGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQ 179
Query: 175 VRKLKAEIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYL 234
+KLK++IA LE S+ + QE +K+Q G P KKI+Q+DV QVEE+ FY+
Sbjct: 180 AKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFYV 239
Query: 235 RLVSSRGQGVAVSLYKALESLTSFDVQNFNFAT-EPERLVLTFNLNVKDCEQNMNLPNLR 293
RLV ++G+GVA SLYK+LESLTSF VQN N ++ P+ +LT+ L+ EQ++NLPNL+
Sbjct: 240 RLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLPNLK 299
Query: 294 LWVTGALLNQGFDVVTPFS 312
LW+TG+LLNQGF+ + F+
Sbjct: 300 LWITGSLLNQGFEFIKSFT 318
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 9/139 (6%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
S+ +VSER RR K+ ++L+ LR++VPNI+KMDKASII DA+SY++ LQ + +KL+AEI
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 185 LEYSMAGSEKNQE--------PIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRL 236
LE + S + P+ K Q+ SG+ + +++++ V + ER + +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLI-EVLELKVTFMGERTMVVSV 172
Query: 237 VSSRGQGVAVSLYKALESL 255
++ V L + ESL
Sbjct: 173 TCNKRTDTMVKLCEVFESL 191
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 20/175 (11%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
S+ +VSER RR K+ ++L+ LR++VPNISK+DKAS+I D++ Y+QEL Q + L+AEI
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 185 LE------------YSMAGSEK-------NQEPIQKPKKSQVLSGNLQPICKKIMQIDVF 225
LE Y +E N + K K S +Q +++++ V
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172
Query: 226 QVEERRFYLRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNV 280
+ E+ + + S+ + V L K LESL + ++ NF++ RL T L V
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESL-NLNILTTNFSSFTSRLSTTLFLQV 226
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 94/161 (58%), Gaps = 7/161 (4%)
Query: 124 RSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE-- 181
+S+ L SERKRR ++ + +YGLRA+VP I+K++K I DAV Y+ EL ++ +KL+ E
Sbjct: 262 KSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELK 321
Query: 182 -IASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSR 240
I +E +E+ Q I P+ +V S + + + K ++I+V + ER F +R+V
Sbjct: 322 GINEMECKEIAAEE-QSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRVVQEH 380
Query: 241 GQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVK 281
Q L +A++ L ++ + NF T + V+T LNVK
Sbjct: 381 KQDGFKRLIEAVD-LCELEIIDVNF-TRLDLTVMTV-LNVK 418
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 91/168 (54%), Gaps = 35/168 (20%)
Query: 124 RSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIA 183
+++ L++ER+RR K+ ++LY LR+LVP I+K+D+ASI+GDA++Y++ELQ + ++L+ E+
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELE 371
Query: 184 SLEYSMAGSEKNQEPIQKPKKSQVLSGNL-------------QPICKKIM---------- 220
+ GS +P+ L+G + P K+ +
Sbjct: 372 ENSETEDGS-------NRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQ 424
Query: 221 ----QIDVFQVEERRFYLRLVSSRGQGVAVSLYKALESLTSFDVQNFN 264
Q+DV Q++ R F+++++ G L +AL+SL +V N N
Sbjct: 425 EMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSL-GLEVTNAN 471
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 88 DGDMKGEHREEENNGDDSSGATRTATTAS-TRNKKADRSRTLVSERKRRGKMKEKLYGLR 146
DG+ GE + G D SG R N +A+ + +ER+RR K+ ++ Y LR
Sbjct: 396 DGEGGGEWADAV--GADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALR 453
Query: 147 ALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYS 188
++VPNISKMDKAS++GDAVSY+ EL +++ ++AE L YS
Sbjct: 454 SVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERLGYS 495
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
++ L++ER+RR K+ ++LY LR++VP ISKMD+ASI+GDA+ YL+EL ++ L E+ S
Sbjct: 266 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 185 LEYSMAG----SEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVEERRFYLRLVSSR 240
S + + Q + K+ S +L + +++V E + + + R
Sbjct: 326 TPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGR 385
Query: 241 GQGVAVSLYKALESLTSFDVQ 261
G+ +S +AL++L DVQ
Sbjct: 386 RPGLLLSTMRALDNL-GLDVQ 405
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Query: 125 SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIAS 184
++ L++ER+RR K+ ++LY LR++VP ISKMD+ASI+GDA+ YL+EL ++ L E+ S
Sbjct: 306 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 365
Query: 185 LEY-SMAGSEKNQEPIQK-PK------KSQVLSGNLQPICKKIMQIDVFQVEERRFYLRL 236
S+ + + P+ P+ K ++ +L + +++V E R + +
Sbjct: 366 TPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHM 425
Query: 237 VSSRGQGVAVSLYKALESLTSFDVQ 261
R G+ ++ KAL++L DVQ
Sbjct: 426 FCGRRPGLLLATMKALDNL-GLDVQ 449
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSM 189
+ER+RR K+ ++ Y LR++VPNISKMDKAS++GDA+SY++ELQ +V+ ++ E + S+
Sbjct: 399 AERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSL 458
Query: 190 AGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQID 223
SE N +++ + + + N + + + I +D
Sbjct: 459 --SESNTITVEESPEVDIQAMNEEVVVRVISPLD 490
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 23/137 (16%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRK-------LKAEI 182
+ER+RR K+ ++ Y LRA+VPN+SKMDKAS++GDA++Y+ EL+ +V K +K ++
Sbjct: 456 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQL 515
Query: 183 ASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKI----MQIDVFQVEERRFYLRLVS 238
++ +AG +K+ G++ C I M+I+V ++ +R+ S
Sbjct: 516 EEVKLELAG-----------RKASASGGDMSSSCSSIKPVGMEIEV-KIIGWDAMIRVES 563
Query: 239 SRGQGVAVSLYKALESL 255
S+ A L AL L
Sbjct: 564 SKRNHPAARLMSALMDL 580
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 47/57 (82%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLE 186
+ER+RR K+ ++ Y LRA+VPN+SKMDKAS++GDA+SY+ EL+ +++K +++ L+
Sbjct: 420 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQ 476
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 50/65 (76%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEYSM 189
+ER+RR K+ ++ Y LRA+VPN+SKMDKAS++GDA+SY+ EL+ ++++ +++ ++ +
Sbjct: 419 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKL 478
Query: 190 AGSEK 194
G K
Sbjct: 479 DGMSK 483
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 88/158 (55%), Gaps = 11/158 (6%)
Query: 117 TRNKKAD---RSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQM 173
T+ K+ D +S L +ER+RR K+ +L LR+ VP ++ M KASI+ DA++Y+ ELQ
Sbjct: 20 TKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQN 79
Query: 174 QVRKLKAEIASLEYSMAGSEKNQ-EPIQKPKKSQVLSGNLQPICKKI---MQIDVFQVEE 229
V+ L +E + ++ Q +P+ KP +V + +L KK+ + + ++ E
Sbjct: 80 NVKNLLETFHEMEEAPPEIDEEQTDPMIKP---EVETSDLNEEMKKLGIEENVQLCKIGE 136
Query: 230 RRFYLRLVSSRGQGVAVSLYKALESLTSFDVQNFNFAT 267
R+F+L++++ + G+ + + L F++ + + T
Sbjct: 137 RKFWLKIITEKRDGIFTKFMEVMRFL-GFEIIDISLTT 173
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 42/52 (80%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
+ER+RR K+ ++ Y LRA+VPNISKMDKAS++ DA++Y+ ++Q ++R + E
Sbjct: 324 AERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETE 375
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 109 TRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYL 168
TR A ++ A S + +E++RR K+ + Y LRA+VP +S+MDKAS++ DAVSY+
Sbjct: 233 TRVAAATKEKHHPAVLSH-VEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYI 291
Query: 169 QELQMQVRKLKAEIASLE 186
+ L+ ++ L+ EI ++
Sbjct: 292 ESLKSKIDDLETEIKKMK 309
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 97 EEENNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMD 156
EE +G +G +RT S R++ A+ +SER+RR ++ EK+ L+ L+PN +K+D
Sbjct: 321 EESGDGRKEAGPSRTGL-GSKRSRSAEVHN--LSERRRRDRINEKMRALQELIPNCNKVD 377
Query: 157 KASIIGDAVSYLQELQMQVR 176
KAS++ +A+ YL+ LQ+QV+
Sbjct: 378 KASMLDEAIEYLKSLQLQVQ 397
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 80 LNSSF-PDLDGDMKGEHREEENNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKM 138
LNS F P L+ ++ + +E N G R + ++ D +++ERKRR K+
Sbjct: 111 LNSIFSPKLEAQVQPHQKSDEFN---RKGTKRAQPFSRNQSNAQDH---IIAERKRREKL 164
Query: 139 KEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
++ L ALVP + KMDKAS++GDA+ +++ LQ +V +L+ +
Sbjct: 165 TQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ 207
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 130 SERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLE 186
+ER RR K+ + Y LRA+VPN+SKMDK S++ DAV Y+ EL+ + ++ E ++E
Sbjct: 347 AERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIE 403
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 107 GATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVS 166
G R + TR+ + L +ERKRR K+ EK L AL+P + K DK +I+ DA+S
Sbjct: 101 GTKRKTCSHGTRSPVLAKEHVL-AERKRREKLSEKFIALSALLPGLKKADKVTILDDAIS 159
Query: 167 YLQELQMQVRKLKAE 181
+++LQ Q+R LK E
Sbjct: 160 RMKQLQEQLRTLKEE 174
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 93 GEHREEE-----NNGDDSSGATRTATTASTRNKKADRSRTL----VSERKRRGKMKEKLY 143
G+ EEE NN DD S +T A TR R R+ + ERKRR + +K+
Sbjct: 191 GDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMR 250
Query: 144 GLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
L+ L+PN K DKAS++ +A+ Y++ LQ+QV+ +
Sbjct: 251 ALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 42/52 (80%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA 180
+SE+KRR K+ E+ LR+++P+ISK+DK SI+ D + YLQ+LQ +V++L++
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 117 TRNKKADRS--RTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQ 174
T++K+ R +V+ER+RR K+ EK LR++VP ++KMDK SI+GD ++Y+ L+ +
Sbjct: 352 TKDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKR 411
Query: 175 VRKLK 179
V +L+
Sbjct: 412 VHELE 416
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEY 187
+++ERKRR K+ E+L L AL+P + K DKA+++ DA+ +L++LQ +V+KL+ E
Sbjct: 134 VLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEE------ 187
Query: 188 SMAGSEKNQEPIQKPKKSQVL--------------------SGNLQPICKKIMQIDVFQV 227
++K + I K+SQV S + I K+ M + +V
Sbjct: 188 -RVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARV 246
Query: 228 EERRFYLRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTF 276
+R +R+ + +G + + +LE V +F LV+T
Sbjct: 247 SDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITI 295
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
+SE+KRR K+ EK+ L+ L+PN +K DKAS++ +A+ YL++LQ+QV+ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 94 EHREEENNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNIS 153
E EE+ G SS +T+ + A+ N+ SERKRR K+ +++ L+ LVPN S
Sbjct: 194 EDEEEKKAGGKSSVSTKRSRAAAIHNQ---------SERKRRDKINQRMKTLQKLVPNSS 244
Query: 154 KMDKASIIGDAVSYLQELQMQV 175
K DKAS++ + + YL++LQ QV
Sbjct: 245 KTDKASMLDEVIEYLKQLQAQV 266
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 41/50 (82%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
+SE++RR ++ EK+ L++L+PN +K DKAS++ +A+ YL++LQ+QV+ L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Query: 97 EEENNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMD 156
E E+ +++ A R +TT++ R++ A+ +SERKRR ++ E++ L+ L+P +K D
Sbjct: 262 ETESRSEETKQA-RVSTTSTKRSRAAEVHN--LSERKRRDRINERMKALQELIPRCNKSD 318
Query: 157 KASIIGDAVSYLQELQMQVRKL 178
KAS++ +A+ Y++ LQ+Q++ +
Sbjct: 319 KASMLDEAIEYMKSLQLQIQMM 340
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 15/115 (13%)
Query: 105 SSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDA 164
++GA + + T+N ++SERKRR K+ E L++L+P+I +++KASI+ +
Sbjct: 402 ATGAAQEMSGTGTKNH-------VMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAET 454
Query: 165 VSYLQELQMQVRKLKAEIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKI 219
++YL+ELQ +V++L+ +S E + SE I +P + GN + + K++
Sbjct: 455 IAYLKELQRRVQELE---SSREPASRPSETTTRLITRPSR-----GNNESVRKEV 501
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 129 VSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKA 180
V E+KRR K+ E+ LR ++P+I+K+DK SI+ D + YLQEL+ +V++L++
Sbjct: 444 VLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELES 495
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 8/92 (8%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEY 187
++SERKRR K+ E L++L+P+I +++KASI+ + ++YL+ELQ +V++L+ +S E
Sbjct: 420 VMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELE---SSREP 476
Query: 188 SMAGSEKNQEPIQKPKKSQVLSGNLQPICKKI 219
+ SE I +P + GN + + K++
Sbjct: 477 ASRPSETTTRLITRPSR-----GNNESVRKEV 503
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 93 GEHREEENNGDDSSGATRTATTASTRNKKADRSRTLVSE------RKRRGKMKEKLYGLR 146
G+ N+ DD + T+ + +KA +R + S+ RKRR ++ ++L L+
Sbjct: 103 GQSLSSYNSSDDEKALGLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQ 162
Query: 147 ALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
+LVPN +K+D ++++ DAV Y++ LQ+Q++ L +E
Sbjct: 163 SLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 117 TRNKKADR-SRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQV 175
TR + R SRT +ER+RR ++ + L+ L+PN +K+D+ASI+G+A+ Y++EL +
Sbjct: 237 TRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTI 296
Query: 176 RKLK 179
+ K
Sbjct: 297 EEFK 300
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 104 DSSGATRTATTASTRNKKADR------SRTLVSERKRRGKMKEKLYGLRALVPNISKMDK 157
D S + NKK + S+ L++ER+RR ++ ++L LR++VP ISKMD+
Sbjct: 150 DQSKSFSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDR 209
Query: 158 ASIIGDAVSYLQELQMQVRKLKAE 181
SI+GDA+ Y++EL ++ KL+ E
Sbjct: 210 TSILGDAIDYMKELLDKINKLQDE 233
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 107 GATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVS 166
G R + +++ D +++ERKRR K+ ++ L AL+P + KMDKAS++GDA+
Sbjct: 110 GTKRAQSLTRSQSNAQDH---ILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIK 166
Query: 167 YLQELQMQV 175
+++ LQ V
Sbjct: 167 HIKYLQESV 175
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 97 EEENNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMD 156
+E NN SG + + + +++ +ER+RR + E+ L+ L+P+ SK D
Sbjct: 185 DENNNAQFDSGIIEFSKEIRRKGRGKRKNKPFTTERERRCHLNERYEALKLLIPSPSKGD 244
Query: 157 KASIIGDAVSYLQELQMQVRKLK 179
+ASI+ D + Y+ EL+ +V +LK
Sbjct: 245 RASILQDGIDYINELRRRVSELK 267
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 113 TTASTRNKKAD--RSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQE 170
T NKK + S+ L++ER+RR ++ ++L LR++VP I+KMD+ SI+GDA+ Y++E
Sbjct: 136 TNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKE 195
Query: 171 LQMQVRKLK 179
L ++ KL+
Sbjct: 196 LLDKINKLQ 204
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 97 EEENNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMD 156
EE NN DD G R + + + + + +ER+RR K++ L+ L+PN +K D
Sbjct: 196 EENNNLDD--GLNR-------KGRGSKKRKIFPTERERRVHFKDRFGDLKNLIPNPTKND 246
Query: 157 KASIIGDAVSYLQELQMQVRKLK 179
+ASI+G+A+ Y++EL + + K
Sbjct: 247 RASIVGEAIDYIKELLRTIDEFK 269
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 92 KGEHREEENNGDDSSGATRTATTASTRNKKADRSR-------TLVSERKRRGKMKEKLYG 144
+G + + ++ AT TA + K R+R ++ER RR ++ E++
Sbjct: 99 QGSGGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKS 158
Query: 145 LRALVPNISKMDKASIIGDAVSYLQELQMQVRKL 178
L+ LVPN +K DKAS++ + + Y++ LQ+QV+ L
Sbjct: 159 LQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
SV=1
Length = 258
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 100 NNGDDSSGATRTATTASTRNKK--ADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDK 157
+N D A+ T+ TR K A ++L + RKRR K+ E+L L+ LVPN +K+D
Sbjct: 150 SNSSDDEKASVTSVKGKTRATKGTATDPQSLYA-RKRREKINERLKTLQNLVPNGTKVDI 208
Query: 158 ASIIGDAVSYLQELQMQVRKLKAE 181
++++ +AV Y++ LQ+Q++ L ++
Sbjct: 209 STMLEEAVHYVKFLQLQIKLLSSD 232
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 86 DLDGDMKGEHREEENNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGL 145
D+ + K + REE N + + R +T+ S R++ A + +SER+RR K+ E + L
Sbjct: 244 DITDERKRKTREETNVENQGTEEARDSTS-SKRSRAAIMHK--LSERRRRQKINEMMKAL 300
Query: 146 RALVPNISKMDKASIIGDAVSYLQELQMQVR 176
+ L+P +K D++S++ D + Y++ LQ Q++
Sbjct: 301 QELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 121 KADRSRTLVSERKRRGKMKEKLYGLRALVPN--ISKMDKASIIGDAVSYLQELQMQVRKL 178
++ R + ER RR +M L LR+++P+ I + D+ASI+G A+ +++ L+ Q++ L
Sbjct: 189 ESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSL 248
Query: 179 KAEIASLEYSMAGSEKNQEPIQKPKKSQVLSGNLQPICKKIMQIDVFQVE----ERRFYL 234
+A+ S S+ N+E I + + +S N K Q ++E E L
Sbjct: 249 EAQKRS-----QQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNL 303
Query: 235 RLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVK 281
++ +R QG + LE L F V + N T P ++++ N+K
Sbjct: 304 KIQCTRKQGQLLRSIILLEKLR-FTVLHLNI-TSPTNTSVSYSFNLK 348
>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
Length = 444
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Query: 100 NNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKAS 159
N SG+TR + A N +SER+RR ++ E++ L+ L+P+ S+ DKAS
Sbjct: 243 NKSSQRSGSTRRSRAAEVHN---------LSERRRRDRINERMKALQELIPHCSRTDKAS 293
Query: 160 IIGDAVSYLQELQMQVRKL 178
I+ +A+ YL+ LQMQ++ +
Sbjct: 294 ILDEAIDYLKSLQMQLQVM 312
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 107 GATRTATTASTRNKKADRSR-------TLVSERKRRGKMKEKLYGLRALVPNISKMDKAS 159
G T + R K R+R ++ER RR ++ E++ L+ LVPN +K DKAS
Sbjct: 83 GTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKAS 142
Query: 160 IIGDAVSYLQELQMQVRKL 178
++ + + Y++ LQ+QV+ L
Sbjct: 143 MLDEIIEYVRFLQLQVKVL 161
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 17/102 (16%)
Query: 85 PDLDGDMKGEHREEENNGDDSSGATRTATTASTRNKKADRSRTL----VSERKRRGKMKE 140
P + +K REE + +++ G+T RSRT ++ER+RR K+ E
Sbjct: 227 PATESKLKA--REETHGTEEARGST-----------SRKRSRTAEMHNLAERRRREKINE 273
Query: 141 KLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEI 182
K+ L+ L+P +K K S + DA+ Y++ LQ Q++ + + +
Sbjct: 274 KMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPM 315
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 105 SSGATRTATTASTRNKKADRSRTL----VSERKRRGKMKEKLYGLRALVPNISKMDKASI 160
++G T A S +A R + ++ER RR ++ E++ L+ LVPN +K DKAS+
Sbjct: 123 ATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASM 182
Query: 161 IGDAVSYLQELQMQVRKL 178
+ + + Y++ LQ+QV+ L
Sbjct: 183 LDEIIDYVKFLQLQVKVL 200
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 131 ERKRRGKMKEKLYGLRALVP--NISKMDKASIIGDAVSYLQELQMQVRKLKAE------- 181
ER RR +M E L LR+L P I + D+ASIIG + +++ELQ V+ L+++
Sbjct: 7 ERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRRKTLN 66
Query: 182 -------IASLEYSMAGSEKNQEPIQKPKKSQVLSG--NLQPICKKIMQIDVFQVEERRF 232
++E S G+ + P + + S + C ++
Sbjct: 67 RPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKISGSNV 126
Query: 233 YLRLVSSRGQGVAVSLYKALESLTSFDVQNFNFATEPERLVLTFNLNVKDCEQNMNLPNL 292
LR+VS R G V + LE L SF V + N ++ E ++ F + + E +++L L
Sbjct: 127 VLRVVSRRIVGQLVKIISVLEKL-SFQVLHLNISSMEETVLYFFVVKI-GLECHLSLEEL 184
Query: 293 RLWVTGALLN 302
L V + ++
Sbjct: 185 TLEVQKSFVS 194
>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
Length = 430
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 9/77 (11%)
Query: 100 NNGDDSSGATRTATTASTRNKKADRSRTLVSERKRRGKMKEKLYGLRALVPNISKMDKAS 159
N + SG+ R + A N +SER+RR ++ E++ L+ L+P+ SK DKAS
Sbjct: 244 NKSNQRSGSNRRSRAAEVHN---------LSERRRRDRINERMKALQELIPHCSKTDKAS 294
Query: 160 IIGDAVSYLQELQMQVR 176
I+ +A+ YL+ LQ+Q++
Sbjct: 295 ILDEAIDYLKSLQLQLQ 311
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 95 HREEENNGDDS-----SGATRTATTASTRNKK------ADRSRTLVSERKRRGKMKEKLY 143
++EEE+ G++ G + T S R+ K A RS+ V+E++RR K+ E+
Sbjct: 7 NQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQ 66
Query: 144 GLRALVPNI-SKMDKASIIGDAVSYLQELQMQVRKLKA 180
LR L+PN K D AS + + + Y+Q LQ +V+K +
Sbjct: 67 ILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEG 104
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 128 LVSERKRRGKMKEKLYGLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAEIASLEY 187
++SERKRR K+ E LR+L+P +K DKAS++ A L LQ ++ KL +E
Sbjct: 291 MISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREVEA 350
Query: 188 SMAG 191
+AG
Sbjct: 351 KLAG 354
>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
SV=1
Length = 352
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 13/98 (13%)
Query: 97 EEENN-------GDDSSGATRTATTASTRNKKADRSRTLVSE------RKRRGKMKEKLY 143
EEE+N G+DSS + A N K SR ++ RKRR ++ E+L
Sbjct: 234 EEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLR 293
Query: 144 GLRALVPNISKMDKASIIGDAVSYLQELQMQVRKLKAE 181
L+ LVPN +K+D ++++ +AV Y++ LQ+Q++ L ++
Sbjct: 294 ILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSD 331
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,129,910
Number of Sequences: 539616
Number of extensions: 4543864
Number of successful extensions: 14888
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 14728
Number of HSP's gapped (non-prelim): 347
length of query: 313
length of database: 191,569,459
effective HSP length: 117
effective length of query: 196
effective length of database: 128,434,387
effective search space: 25173139852
effective search space used: 25173139852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)