Query 021357
Match_columns 313
No_of_seqs 207 out of 1996
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 09:37:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021357.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021357hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.8E-77 6E-82 515.8 20.4 301 13-313 2-303 (303)
2 KOG0373 Serine/threonine speci 100.0 2.8E-71 6.1E-76 471.8 21.1 303 11-313 3-306 (306)
3 PTZ00239 serine/threonine prot 100.0 5.5E-68 1.2E-72 488.6 33.1 301 13-313 2-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.2E-67 2.7E-72 483.6 31.2 284 14-297 2-285 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 1.7E-66 3.6E-71 480.9 31.3 284 10-294 3-321 (321)
6 PTZ00480 serine/threonine-prot 100.0 3.7E-66 8E-71 477.9 30.7 287 13-300 10-305 (320)
7 cd07416 MPP_PP2B PP2B, metallo 100.0 8E-65 1.7E-69 469.5 32.0 286 12-299 1-300 (305)
8 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 4.1E-65 8.8E-70 468.7 28.8 282 14-296 2-292 (293)
9 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.4E-64 3E-69 468.9 30.4 290 9-299 11-307 (316)
10 PTZ00244 serine/threonine-prot 100.0 1.3E-64 2.9E-69 464.7 29.7 282 13-295 3-293 (294)
11 KOG0371 Serine/threonine prote 100.0 3.5E-66 7.6E-71 449.7 18.1 313 1-313 7-319 (319)
12 KOG0374 Serine/threonine speci 100.0 4.4E-64 9.4E-69 465.6 24.9 272 26-297 31-304 (331)
13 smart00156 PP2Ac Protein phosp 100.0 2.5E-63 5.5E-68 453.2 29.4 269 27-296 1-270 (271)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 1.4E-60 2.9E-65 447.7 31.2 290 7-296 5-366 (377)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 7.6E-61 1.6E-65 444.7 29.1 271 25-295 19-311 (311)
16 KOG0375 Serine-threonine phosp 100.0 2.3E-56 4.9E-61 403.5 13.8 287 11-299 45-345 (517)
17 KOG0377 Protein serine/threoni 100.0 6.3E-50 1.4E-54 369.4 15.3 295 7-302 114-438 (631)
18 KOG0376 Serine-threonine phosp 100.0 3.3E-42 7.1E-47 324.5 13.3 291 10-301 166-463 (476)
19 cd00144 MPP_PPP_family phospho 100.0 2.4E-35 5.2E-40 262.0 22.1 214 57-281 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 4.5E-29 9.8E-34 225.2 19.7 192 54-286 1-226 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 8.7E-29 1.9E-33 218.0 15.5 179 57-269 1-199 (208)
22 cd07423 MPP_PrpE Bacillus subt 100.0 1.7E-27 3.7E-32 213.6 19.3 201 54-285 1-222 (234)
23 PRK00166 apaH diadenosine tetr 100.0 1.3E-27 2.8E-32 218.2 17.7 218 54-284 1-260 (275)
24 cd07413 MPP_PA3087 Pseudomonas 100.0 1.9E-27 4.2E-32 211.5 17.6 116 57-175 2-143 (222)
25 PHA02239 putative protein phos 100.0 4.5E-27 9.8E-32 210.4 17.8 175 54-269 1-221 (235)
26 PRK11439 pphA serine/threonine 99.9 4.5E-27 9.8E-32 208.7 16.3 180 52-269 15-208 (218)
27 cd07421 MPP_Rhilphs Rhilph pho 99.9 1.3E-26 2.7E-31 210.4 18.3 198 55-283 3-292 (304)
28 TIGR00668 apaH bis(5'-nucleosy 99.9 1E-26 2.2E-31 210.8 14.7 128 54-185 1-134 (279)
29 cd07422 MPP_ApaH Escherichia c 99.9 1.2E-26 2.5E-31 209.8 14.1 125 56-184 1-131 (257)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 2.6E-25 5.6E-30 195.9 19.3 190 54-279 1-204 (207)
31 PRK09968 serine/threonine-spec 99.9 7.2E-24 1.5E-28 188.1 17.8 180 53-269 14-208 (218)
32 cd00841 MPP_YfcE Escherichia c 99.5 2.4E-13 5.2E-18 113.8 14.6 59 55-125 1-59 (155)
33 PF00149 Metallophos: Calcineu 99.5 1.1E-13 2.4E-18 114.1 11.5 160 54-248 1-199 (200)
34 PRK09453 phosphodiesterase; Pr 99.5 6.2E-13 1.3E-17 114.7 14.9 69 54-126 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.5 5.3E-13 1.2E-17 112.4 12.5 63 54-125 1-64 (158)
36 PF12850 Metallophos_2: Calcin 99.5 1.3E-12 2.9E-17 108.7 13.4 137 54-266 1-137 (156)
37 cd07379 MPP_239FB Homo sapiens 99.3 1.6E-11 3.4E-16 100.7 10.5 118 55-253 1-120 (135)
38 cd07397 MPP_DevT Myxococcus xa 99.3 7.7E-11 1.7E-15 105.3 13.5 157 55-249 2-208 (238)
39 cd07394 MPP_Vps29 Homo sapiens 99.3 2.6E-10 5.6E-15 98.2 15.3 126 55-267 1-135 (178)
40 cd07388 MPP_Tt1561 Thermus the 99.2 6E-10 1.3E-14 99.1 16.5 72 53-125 4-75 (224)
41 cd07392 MPP_PAE1087 Pyrobaculu 99.1 4.4E-10 9.6E-15 96.3 11.3 66 56-127 1-67 (188)
42 PRK05340 UDP-2,3-diacylglucosa 99.1 1.6E-09 3.4E-14 97.6 14.1 212 54-293 1-238 (241)
43 cd00838 MPP_superfamily metall 99.0 5.8E-09 1.3E-13 82.8 10.6 117 57-253 1-119 (131)
44 cd07399 MPP_YvnB Bacillus subt 99.0 3.1E-08 6.8E-13 87.6 15.7 192 55-295 2-213 (214)
45 cd07404 MPP_MS158 Microscilla 98.9 2.6E-09 5.7E-14 90.4 8.2 67 56-125 1-68 (166)
46 cd07403 MPP_TTHA0053 Thermus t 98.9 1.1E-08 2.5E-13 83.3 10.9 107 57-253 1-107 (129)
47 COG0622 Predicted phosphoester 98.9 4.6E-08 1E-12 83.5 15.0 162 54-297 2-167 (172)
48 cd07400 MPP_YydB Bacillus subt 98.9 2.9E-08 6.3E-13 81.8 13.0 117 56-253 1-129 (144)
49 COG2129 Predicted phosphoester 98.9 8.6E-08 1.9E-12 83.9 14.6 192 53-293 3-224 (226)
50 PRK11340 phosphodiesterase Yae 98.9 2.4E-08 5.3E-13 91.5 11.5 71 53-125 49-125 (271)
51 TIGR03729 acc_ester putative p 98.8 1.4E-08 3E-13 91.3 7.8 68 55-125 1-74 (239)
52 cd07385 MPP_YkuE_C Bacillus su 98.8 3.7E-08 7.9E-13 87.1 9.8 70 54-125 2-76 (223)
53 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 2.2E-08 4.8E-13 89.6 7.7 68 56-125 1-81 (231)
54 cd07395 MPP_CSTP1 Homo sapiens 98.7 8.4E-07 1.8E-11 80.7 18.0 72 54-125 5-99 (262)
55 cd07383 MPP_Dcr2 Saccharomyces 98.7 4.5E-07 9.8E-12 79.1 13.0 70 54-123 3-87 (199)
56 PRK04036 DNA polymerase II sma 98.7 4.4E-07 9.5E-12 90.2 14.3 73 52-126 242-344 (504)
57 cd07402 MPP_GpdQ Enterobacter 98.6 4E-07 8.6E-12 81.4 12.4 67 55-125 1-83 (240)
58 PF06874 FBPase_2: Firmicute f 98.6 1.5E-06 3.3E-11 86.0 15.5 72 225-298 507-588 (640)
59 PRK11148 cyclic 3',5'-adenosin 98.6 5E-06 1.1E-10 76.3 18.1 72 52-125 13-98 (275)
60 cd07396 MPP_Nbla03831 Homo sap 98.5 2.7E-06 5.8E-11 77.8 14.8 72 55-126 2-87 (267)
61 COG0639 ApaH Diadenosine tetra 98.5 2.8E-07 6.1E-12 75.1 7.3 142 128-270 4-154 (155)
62 cd07393 MPP_DR1119 Deinococcus 98.4 1.9E-06 4E-11 77.2 10.3 67 56-124 1-83 (232)
63 cd07398 MPP_YbbF-LpxH Escheric 98.3 4E-07 8.6E-12 80.1 3.9 29 225-253 177-205 (217)
64 cd08165 MPP_MPPE1 human MPPE1 98.2 1.3E-05 2.9E-10 67.3 9.9 48 78-125 36-89 (156)
65 COG2908 Uncharacterized protei 98.2 8.4E-06 1.8E-10 72.2 8.3 199 57-288 1-230 (237)
66 TIGR00619 sbcd exonuclease Sbc 98.2 4.7E-06 1E-10 75.7 6.9 72 54-125 1-88 (253)
67 COG1409 Icc Predicted phosphoh 98.1 0.00029 6.2E-09 64.3 18.1 74 54-129 1-82 (301)
68 cd07401 MPP_TMEM62_N Homo sapi 98.1 2.9E-05 6.2E-10 70.6 10.4 70 56-125 2-89 (256)
69 PHA02546 47 endonuclease subun 98.0 1.1E-05 2.3E-10 76.5 6.6 72 54-125 1-89 (340)
70 cd00839 MPP_PAPs purple acid p 97.9 1.8E-05 4E-10 72.9 6.4 70 53-126 4-82 (294)
71 cd07391 MPP_PF1019 Pyrococcus 97.9 3.1E-05 6.8E-10 66.0 7.1 57 69-126 30-89 (172)
72 cd00840 MPP_Mre11_N Mre11 nucl 97.9 2.3E-05 4.9E-10 68.9 6.1 72 55-127 1-91 (223)
73 TIGR00583 mre11 DNA repair pro 97.8 5.6E-05 1.2E-09 73.0 7.5 55 52-106 2-68 (405)
74 PF14582 Metallophos_3: Metall 97.8 0.00024 5.2E-09 62.6 10.4 73 53-126 5-103 (255)
75 cd07390 MPP_AQ1575 Aquifex aeo 97.7 4.7E-05 1E-09 64.7 5.3 66 56-126 1-83 (168)
76 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 9.4E-05 2E-09 67.5 7.1 70 56-125 1-86 (262)
77 TIGR00024 SbcD_rel_arch putati 97.7 0.00011 2.3E-09 65.6 7.1 69 54-126 15-103 (225)
78 cd08163 MPP_Cdc1 Saccharomyces 97.7 0.00074 1.6E-08 61.5 12.1 31 224-256 203-233 (257)
79 PRK10966 exonuclease subunit S 97.6 9.5E-05 2.1E-09 71.7 5.9 71 54-125 1-87 (407)
80 cd07380 MPP_CWF19_N Schizosacc 97.6 0.00069 1.5E-08 56.6 9.7 119 57-248 1-121 (150)
81 COG1408 Predicted phosphohydro 97.5 0.00017 3.6E-09 66.6 6.1 72 53-126 44-119 (284)
82 cd08166 MPP_Cdc1_like_1 unchar 97.5 0.0013 2.9E-08 57.1 11.0 48 78-125 40-93 (195)
83 cd07386 MPP_DNA_pol_II_small_a 97.4 0.00019 4.1E-09 64.6 5.3 67 57-125 2-94 (243)
84 COG0420 SbcD DNA repair exonuc 97.1 0.0011 2.4E-08 63.9 7.2 73 54-126 1-89 (390)
85 COG3855 Fbp Uncharacterized pr 97.1 0.0038 8.2E-08 60.1 9.6 42 81-127 191-232 (648)
86 COG1311 HYS2 Archaeal DNA poly 97.0 0.021 4.5E-07 55.6 14.4 207 54-295 226-472 (481)
87 KOG3325 Membrane coat complex 96.9 0.03 6.5E-07 46.2 12.6 128 56-267 3-136 (183)
88 cd00845 MPP_UshA_N_like Escher 96.9 0.0016 3.5E-08 58.6 5.4 66 55-125 2-82 (252)
89 cd07384 MPP_Cdc1_like Saccharo 96.8 0.0021 4.6E-08 54.8 5.5 49 77-125 42-100 (171)
90 COG4186 Predicted phosphoester 96.8 0.0046 1E-07 51.4 6.7 66 56-125 6-86 (186)
91 KOG1432 Predicted DNA repair e 96.7 0.12 2.5E-06 48.5 15.6 72 53-125 53-147 (379)
92 cd07387 MPP_PolD2_C PolD2 (DNA 96.6 0.12 2.6E-06 47.0 15.2 50 239-293 205-257 (257)
93 PLN02533 probable purple acid 96.5 0.0035 7.6E-08 61.2 4.7 70 53-125 139-211 (427)
94 COG1407 Predicted ICC-like pho 96.4 0.0083 1.8E-07 53.5 6.5 72 52-126 18-111 (235)
95 cd00842 MPP_ASMase acid sphing 96.3 0.034 7.4E-07 51.3 10.4 72 56-127 40-124 (296)
96 cd07410 MPP_CpdB_N Escherichia 96.3 0.005 1.1E-07 56.5 4.6 65 55-124 2-94 (277)
97 COG1768 Predicted phosphohydro 96.1 0.01 2.2E-07 50.6 4.8 44 79-126 42-87 (230)
98 PF08321 PPP5: PPP5 TPR repeat 95.9 0.012 2.6E-07 45.2 4.4 50 2-51 44-94 (95)
99 cd08164 MPP_Ted1 Saccharomyces 95.9 0.019 4.1E-07 49.9 6.0 65 60-124 23-110 (193)
100 cd07408 MPP_SA0022_N Staphyloc 95.8 0.014 3E-07 53.0 4.8 65 55-124 2-81 (257)
101 KOG2863 RNA lariat debranching 95.7 0.029 6.3E-07 52.6 6.7 74 54-127 1-90 (456)
102 cd07378 MPP_ACP5 Homo sapiens 95.6 0.026 5.6E-07 51.4 5.9 25 226-250 190-214 (277)
103 cd07412 MPP_YhcR_N Bacillus su 95.5 0.013 2.8E-07 54.2 3.6 65 55-124 2-87 (288)
104 KOG0376 Serine-threonine phosp 94.7 0.017 3.6E-07 56.1 1.8 111 26-138 14-129 (476)
105 cd07409 MPP_CD73_N CD73 ecto-5 94.5 0.074 1.6E-06 48.9 5.6 65 55-124 2-93 (281)
106 cd07411 MPP_SoxB_N Thermus the 94.4 0.06 1.3E-06 49.0 4.8 65 55-125 2-95 (264)
107 cd07406 MPP_CG11883_N Drosophi 93.7 0.12 2.7E-06 46.8 5.4 65 55-124 2-82 (257)
108 PRK09419 bifunctional 2',3'-cy 93.1 0.11 2.5E-06 57.0 4.9 66 54-124 661-735 (1163)
109 TIGR00282 metallophosphoestera 93.1 0.16 3.5E-06 46.4 5.1 67 54-125 1-71 (266)
110 KOG3662 Cell division control 92.4 0.26 5.7E-06 47.5 5.8 72 53-124 48-143 (410)
111 cd07405 MPP_UshA_N Escherichia 92.2 0.16 3.4E-06 46.9 3.8 66 55-125 2-87 (285)
112 KOG1378 Purple acid phosphatas 91.8 0.55 1.2E-05 45.8 7.1 34 227-260 322-355 (452)
113 PF04042 DNA_pol_E_B: DNA poly 90.3 0.39 8.4E-06 41.8 4.2 72 56-127 1-93 (209)
114 cd08162 MPP_PhoA_N Synechococc 90.1 0.38 8.3E-06 45.1 4.3 65 55-124 2-90 (313)
115 cd07382 MPP_DR1281 Deinococcus 90.1 0.58 1.3E-05 42.6 5.3 66 55-125 1-70 (255)
116 COG0737 UshA 5'-nucleotidase/2 90.0 0.31 6.7E-06 48.8 3.8 69 52-125 25-115 (517)
117 cd07407 MPP_YHR202W_N Saccharo 88.7 0.42 9.1E-06 44.1 3.4 68 53-125 5-97 (282)
118 KOG3339 Predicted glycosyltran 88.2 5.6 0.00012 34.3 9.5 85 82-172 40-140 (211)
119 KOG2310 DNA repair exonuclease 88.1 1.2 2.7E-05 44.2 6.2 59 51-109 11-81 (646)
120 TIGR01390 CycNucDiestase 2',3' 87.8 0.58 1.3E-05 48.1 4.0 66 54-124 3-98 (626)
121 PRK09420 cpdB bifunctional 2', 87.6 0.64 1.4E-05 48.0 4.2 68 52-124 24-121 (649)
122 PRK09419 bifunctional 2',3'-cy 86.4 0.83 1.8E-05 50.4 4.6 67 53-124 41-138 (1163)
123 KOG3947 Phosphoesterases [Gene 86.3 0.97 2.1E-05 41.2 4.1 66 53-126 61-127 (305)
124 KOG2476 Uncharacterized conser 84.8 2.4 5.1E-05 41.4 6.1 69 53-122 5-75 (528)
125 PRK11907 bifunctional 2',3'-cy 83.2 1.4 2.9E-05 46.7 4.2 67 53-124 115-212 (814)
126 TIGR01530 nadN NAD pyrophospha 82.2 2 4.4E-05 43.4 4.9 65 55-124 2-93 (550)
127 PTZ00422 glideosome-associated 81.2 2.5 5.5E-05 40.8 4.9 71 52-124 25-108 (394)
128 PTZ00235 DNA polymerase epsilo 79.8 4.1 9E-05 37.6 5.6 73 53-125 27-122 (291)
129 PRK09558 ushA bifunctional UDP 79.7 1.8 4E-05 43.7 3.6 68 52-124 33-120 (551)
130 PRK09418 bifunctional 2',3'-cy 76.7 2.9 6.2E-05 44.1 4.0 68 52-124 38-141 (780)
131 KOG0918 Selenium-binding prote 74.6 0.16 3.5E-06 48.4 -5.1 94 81-180 48-144 (476)
132 KOG2679 Purple (tartrate-resis 67.3 5.6 0.00012 36.5 3.1 80 46-125 36-126 (336)
133 cd07381 MPP_CapA CapA and rela 63.4 15 0.00033 32.6 5.3 36 232-269 202-237 (239)
134 PF13258 DUF4049: Domain of un 60.8 29 0.00064 31.1 6.3 88 82-176 86-186 (318)
135 PF02875 Mur_ligase_C: Mur lig 57.9 29 0.00063 25.6 5.2 68 54-121 12-81 (91)
136 smart00854 PGA_cap Bacterial c 52.6 30 0.00065 30.7 5.3 35 233-269 201-235 (239)
137 COG4320 Uncharacterized protei 46.8 30 0.00065 32.6 4.3 58 44-109 47-108 (410)
138 PF12641 Flavodoxin_3: Flavodo 45.9 1.1E+02 0.0025 25.5 7.4 53 57-109 2-67 (160)
139 PRK10773 murF UDP-N-acetylmura 42.5 1.4E+02 0.0031 29.2 8.7 66 54-120 325-392 (453)
140 cd07382 MPP_DR1281 Deinococcus 38.4 41 0.00089 30.5 3.9 40 83-125 1-40 (255)
141 PF09949 DUF2183: Uncharacteri 37.3 1.2E+02 0.0026 23.3 5.8 42 68-118 54-95 (100)
142 PF09587 PGA_cap: Bacterial ca 36.7 70 0.0015 28.5 5.1 36 232-269 211-246 (250)
143 COG3855 Fbp Uncharacterized pr 35.7 17 0.00037 35.8 1.0 71 226-296 515-593 (648)
144 TIGR00282 metallophosphoestera 35.2 51 0.0011 30.2 4.0 39 83-125 2-41 (266)
145 PF06569 DUF1128: Protein of u 34.1 77 0.0017 22.9 3.9 38 5-42 32-69 (71)
146 PF12085 DUF3562: Protein of u 34.0 97 0.0021 22.1 4.3 42 9-50 1-42 (66)
147 TIGR01143 murF UDP-N-acetylmur 33.6 1.4E+02 0.0031 28.7 7.1 68 54-122 296-365 (417)
148 TIGR03767 P_acnes_RR metalloph 33.3 1.8E+02 0.0039 29.2 7.6 58 225-284 367-431 (496)
149 COG0634 Hpt Hypoxanthine-guani 33.2 3.1E+02 0.0068 23.5 8.3 75 26-104 11-116 (178)
150 KOG3425 Uncharacterized conser 31.1 1.6E+02 0.0036 23.6 5.6 60 66-125 12-79 (128)
151 KOG3818 DNA polymerase epsilon 30.4 4.9E+02 0.011 25.8 9.7 116 3-126 235-370 (525)
152 cd07378 MPP_ACP5 Homo sapiens 29.5 93 0.002 27.9 4.8 69 55-125 2-83 (277)
153 COG1692 Calcineurin-like phosp 29.0 82 0.0018 28.6 4.0 13 238-250 169-181 (266)
154 KOG3770 Acid sphingomyelinase 28.9 1.3E+02 0.0027 30.7 5.7 61 69-129 197-267 (577)
155 COG0770 MurF UDP-N-acetylmuram 27.5 2.7E+02 0.0058 27.6 7.8 94 27-121 300-395 (451)
156 PF06490 FleQ: Flagellar regul 27.3 1.2E+02 0.0026 23.5 4.4 64 55-125 1-81 (109)
157 PLN02965 Probable pheophorbida 25.1 2.7E+02 0.0058 24.3 6.9 21 227-247 59-81 (255)
158 COG0148 Eno Enolase [Carbohydr 24.2 6.3E+02 0.014 24.6 9.2 91 26-118 168-281 (423)
159 COG1692 Calcineurin-like phosp 24.1 1.9E+02 0.0042 26.2 5.5 66 54-124 1-70 (266)
160 TIGR00758 UDG_fam4 uracil-DNA 23.7 4.4E+02 0.0095 22.1 7.7 73 51-125 19-113 (173)
161 cd03030 GRX_SH3BGR Glutaredoxi 22.1 1.4E+02 0.0031 22.5 3.8 22 53-74 60-82 (92)
162 PLN02533 probable purple acid 21.7 81 0.0018 30.9 3.0 24 226-249 311-334 (427)
163 TIGR01428 HAD_type_II 2-haloal 21.6 3.1E+02 0.0067 22.9 6.3 67 54-123 109-175 (198)
164 COG4030 Uncharacterized protei 21.0 3.1E+02 0.0066 24.8 6.0 80 34-124 160-241 (315)
165 PF04723 GRDA: Glycine reducta 20.9 3E+02 0.0066 22.6 5.5 69 53-125 5-79 (150)
166 PRK11929 putative bifunctional 20.5 2.9E+02 0.0063 29.9 7.2 70 54-123 834-905 (958)
167 PF10083 DUF2321: Uncharacteri 20.0 38 0.00083 28.3 0.2 48 222-275 20-76 (158)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-77 Score=515.83 Aligned_cols=301 Identities=65% Similarity=1.210 Sum_probs=292.0
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeecccc
Q 021357 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (313)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vD 92 (313)
++++.|+++++++.+++.++..||.+++++|.+|+++..++.|+.|+|||||++.+|..+|+..|..+...|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecC
Q 021357 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHG 172 (313)
Q Consensus 93 rG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHg 172 (313)
||..|+|++.+|..||.+||+++.+||||||.+.+...|||++||.+|||...+|+...+.|..||++|++++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccce
Q 021357 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGF 252 (313)
Q Consensus 173 Gi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~ 252 (313)
|++|++.++++|+.+.|.+++|+.+..+|++||||.+..+|..+|||.||.||++.+++|++.||++.|+|+||.+.+||
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGy 241 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGY 241 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCCCCCCCCCCCCCC-CCCC
Q 021357 253 NWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTP-DYFL 313 (313)
Q Consensus 253 ~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 313 (313)
++.++++++|||||||||++|+|.||+|.|+++....|+.|+..|..++..-.+++. |||+
T Consensus 242 k~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 242 KWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 999999999999999999999999999999999999999999999888854444444 9985
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-71 Score=471.78 Aligned_cols=303 Identities=60% Similarity=1.110 Sum_probs=295.1
Q ss_pred cccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeecc
Q 021357 11 TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDY 90 (313)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~ 90 (313)
.-++++||+.+++|+.++++++..||+.+++++..|.++.|.+.|+.|+|||||++.+|.++++..|..|...|||+||+
T Consensus 3 ~~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDf 82 (306)
T KOG0373|consen 3 KMDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDF 82 (306)
T ss_pred cCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccc
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEe
Q 021357 91 VDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCL 170 (313)
Q Consensus 91 vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~v 170 (313)
||||..|+|+..+|+.||.+||.++.+||||||.+.+...|||++||..|||....|+-..+.|..|+++|+|+++++||
T Consensus 83 VDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCV 162 (306)
T KOG0373|consen 83 VDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCV 162 (306)
T ss_pred cccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeecccccc
Q 021357 171 HGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMD 250 (313)
Q Consensus 171 HgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~ 250 (313)
|||+||++..+++|+-+.|.+++|.++.++|++||||++.+.|..+|||.||.||.+.+.+|+..|++++|.|+||.+.+
T Consensus 163 HGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~E 242 (306)
T KOG0373|consen 163 HGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQE 242 (306)
T ss_pred cCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCe-EEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021357 251 GFNWAHEQK-VVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 313 (313)
Q Consensus 251 G~~~~~~~~-~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (313)
||+..++++ ++||+||||||++|+|.|++|.++++.+++++.|.+.|-.++..-+++...||+
T Consensus 243 G~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 243 GFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred hHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 999888777 999999999999999999999999999999999999999988777888888985
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=5.5e-68 Score=488.61 Aligned_cols=301 Identities=55% Similarity=1.062 Sum_probs=283.2
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeecccc
Q 021357 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (313)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vD 92 (313)
+++++++++.+...++++++.+||++|++++.+||+++++..+++|+|||||++.+|.++|+..+..+.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 37889999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecC
Q 021357 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHG 172 (313)
Q Consensus 93 rG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHg 172 (313)
||++++|++.+++++|..+|.++++||||||.+.++..++|..|+..+|+...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred CCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccce
Q 021357 173 GLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGF 252 (313)
Q Consensus 173 Gi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~ 252 (313)
|++|...++++++.+.|+.+.|.++.+.|++||||.+..+|.+++||.|+.||++++++||+++++++||||||++++||
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 241 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGY 241 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccce
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred EEecC-CeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021357 253 NWAHE-QKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 313 (313)
Q Consensus 253 ~~~~~-~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (313)
+..++ ++++|||||++||+..+|.||+|.++++..++|++|+|.+..........++.||.
T Consensus 242 ~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 242 KYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred EEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 98765 45999999999999999999999999999999999999987654443455567874
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.2e-67 Score=483.58 Aligned_cols=284 Identities=74% Similarity=1.307 Sum_probs=275.0
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccC
Q 021357 14 LDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDR 93 (313)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDr 93 (313)
++++++++.+...++++++.+||++|++++++||+++++..+++|||||||++.+|.++|+..+.++.+++|||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCC
Q 021357 94 GYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGG 173 (313)
Q Consensus 94 G~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgG 173 (313)
|++++|++.+++++|..+|.++++||||||.+.++..++|..|+..+|+...+|..+.++|.+||++++++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021357 174 LSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (313)
Q Consensus 174 i~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~ 253 (313)
|+|...++++++.++|+.+.+..+.+.+++||||.+..+|.+++||.|+.||++++++||+++++++|||||+++++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~ 241 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQ 241 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEE
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCC
Q 021357 254 WAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAP 297 (313)
Q Consensus 254 ~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~ 297 (313)
+.++++++|||||++||+..+|+||+|.|+++.+++|++|+|.|
T Consensus 242 ~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 242 WMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999865
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.7e-66 Score=480.90 Aligned_cols=284 Identities=32% Similarity=0.613 Sum_probs=259.2
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----ceeEecCCCCCHHHHHHHHHHcCCCC-CCce
Q 021357 10 TTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGGKCP-DTNY 84 (313)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~----~i~viGDiHG~~~~l~~lL~~~~~~~-~~~~ 84 (313)
|.++++++++++.+...++++++.+||++|+++|++||+++.+.. |++|||||||++++|.++|+..+.++ .+++
T Consensus 3 ~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~ 82 (321)
T cd07420 3 TKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPY 82 (321)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceE
Confidence 556799999999999999999999999999999999999988764 89999999999999999999999875 4679
Q ss_pred EEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCC--chhHHHHHHHHhhCCcEEE
Q 021357 85 LFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTAL 162 (313)
Q Consensus 85 vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~ 162 (313)
||||||||||++|+||+.+|+++|..+|+++++||||||.+.++..+||..|+..+|+. ..+|..+.++|+.||++++
T Consensus 83 lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaai 162 (321)
T cd07420 83 VFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATI 162 (321)
T ss_pred EEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999974 5799999999999999999
Q ss_pred EcCcEEEecCCCCCCccchhhhhhcccccc-----CCC----------------------CCccccccccCCCCCCC-CC
Q 021357 163 VESEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WG 214 (313)
Q Consensus 163 i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~-----~~~----------------------~~~~~~llW~dp~~~~~-~~ 214 (313)
++++++||||||+| ..++++++.++|+.. .|. ..++.++|||||.+..+ |.
T Consensus 163 i~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~ 241 (321)
T cd07420 163 IDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKP 241 (321)
T ss_pred EcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCc
Confidence 99999999999997 457888888877421 111 03578999999987544 77
Q ss_pred cCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEee
Q 021357 215 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFE 294 (313)
Q Consensus 215 ~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~ 294 (313)
+++||.|+.||++++++||+++++++||||||++++||++.++++++|||||++||+.++|.||+|.|+++..++|.+|.
T Consensus 242 ~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 242 NTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999998873
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=3.7e-66 Score=477.94 Aligned_cols=287 Identities=45% Similarity=0.930 Sum_probs=273.4
Q ss_pred cHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCce
Q 021357 13 DLDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNY 84 (313)
Q Consensus 13 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~ 84 (313)
+++++++++.+.. .++++++..||++|++++.+||+++++..+++|||||||++.+|.++|+..++++.+++
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 3888888887543 69999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEc
Q 021357 85 LFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVE 164 (313)
Q Consensus 85 vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 164 (313)
||||||||||++++|++.+++.+|..+|.++++||||||...++..++|..++..+|+ ..+|..+.++|..||++|+++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhheec
Confidence 9999999999999999999999999999999999999999999999999999999994 679999999999999999999
Q ss_pred CcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEe
Q 021357 165 SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243 (313)
Q Consensus 165 ~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVr 243 (313)
++++||||||+|.+.++++++.+.|+.+.+..+.+.+++||||.. ..+|.+++||.|+.||++++++||+++++++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999999999999999999999999986 5789999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCCCCC
Q 021357 244 AHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRG 300 (313)
Q Consensus 244 GHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 300 (313)
|||++++||++.++++++|||||++||+..+|.||+|.|+++..++|.+|+|.+...
T Consensus 249 ~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~ 305 (320)
T PTZ00480 249 AHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQ 305 (320)
T ss_pred cCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCcccc
Confidence 999999999999999999999999999999999999999999999999999777653
No 7
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=8e-65 Score=469.47 Aligned_cols=286 Identities=42% Similarity=0.761 Sum_probs=269.4
Q ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccc
Q 021357 12 TDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV 91 (313)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~v 91 (313)
+.++.+++++++.+.++++++.+||++|++++++||++++++.+++|||||||++.+|.++|+..+.++.+++|||||||
T Consensus 1 ~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyV 80 (305)
T cd07416 1 PRIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYV 80 (305)
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCcc
Confidence 46788999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEec
Q 021357 92 DRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLH 171 (313)
Q Consensus 92 DrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vH 171 (313)
|||++|+|++.+++++|..+|.++++||||||.+.++..++|..++..+| ...++..+.++|++||++++++++++|||
T Consensus 81 DRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vH 159 (305)
T cd07416 81 DRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVH 159 (305)
T ss_pred CCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEc
Confidence 99999999999999999999999999999999999999999999999998 46789999999999999999999999999
Q ss_pred CCCCCCccchhhhhhccccccCCCCCccccccccCCCCCC-------CCCcC-CCCCccccCHHHHHHHHHhCCceEEEe
Q 021357 172 GGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRC-------GWGIS-PRGAGYTFGQDISEQFNHTNNLKLIAR 243 (313)
Q Consensus 172 gGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~-------~~~~~-~rg~~~~fg~~~~~~~l~~~~~~~iVr 243 (313)
||++|.+.++++++.++|+.+.|..++++|++||||.... .|.++ +||.|+.||++++++||+++++++|||
T Consensus 160 GGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR 239 (305)
T cd07416 160 GGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIR 239 (305)
T ss_pred CCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999989999999999997532 36654 899999999999999999999999999
Q ss_pred eccccccceEEecCC------eEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCCCC
Q 021357 244 AHQLVMDGFNWAHEQ------KVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRR 299 (313)
Q Consensus 244 GHt~~~~G~~~~~~~------~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 299 (313)
|||++++||++.+++ +++|||||++||+..+|.||+|.|+++. ..|.+|++.|.+
T Consensus 240 ~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~ 300 (305)
T cd07416 240 AHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 300 (305)
T ss_pred eccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCC
Confidence 999999999988776 8999999999999999999999999875 799999999865
No 8
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=4.1e-65 Score=468.66 Aligned_cols=282 Identities=46% Similarity=0.969 Sum_probs=267.8
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceE
Q 021357 14 LDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYL 85 (313)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~v 85 (313)
++++++++.+.. .++++++.+||++|++++++||+++++..+++|||||||++.+|.++|+..+.++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 566777776544 699999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcC
Q 021357 86 FMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES 165 (313)
Q Consensus 86 flGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~ 165 (313)
|||||||||++++|++.+++++|..+|.++++||||||.+.++..++|..++..+|+ ..+|..+.++|++||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999984 6789999999999999999999
Q ss_pred cEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEee
Q 021357 166 EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARA 244 (313)
Q Consensus 166 ~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrG 244 (313)
+++|||||++|.+.++++++.+.|+.+.+..+.+.+++|+||.. ..+|.+++||.|+.||++++++||+++++++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999999999999999999986 67899999999999999999999999999999999
Q ss_pred ccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecC
Q 021357 245 HQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPA 296 (313)
Q Consensus 245 Ht~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~ 296 (313)
||++++||++..+++++|||||++||+..+|.||+|.|+++..++|+.|+|.
T Consensus 241 He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999864
No 9
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.4e-64 Score=468.92 Aligned_cols=290 Identities=37% Similarity=0.720 Sum_probs=271.9
Q ss_pred CCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----ceeEecCCCCCHHHHHHHHHHcCCCCC-Cc
Q 021357 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGGKCPD-TN 83 (313)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~----~i~viGDiHG~~~~l~~lL~~~~~~~~-~~ 83 (313)
-|-+.++++++++++...++++++.+||++|++++++||+++++.. +++||||||||+.+|.++|+..++++. ++
T Consensus 11 i~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ 90 (316)
T cd07417 11 VTLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNP 90 (316)
T ss_pred CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCe
Confidence 5667799999999999899999999999999999999999987764 499999999999999999999998654 56
Q ss_pred eEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEE
Q 021357 84 YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALV 163 (313)
Q Consensus 84 ~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i 163 (313)
+||||||||||++|+|++.+++++|..+|.++++||||||.+.++..++|..++..+|+ ..++..+.++|++||+++++
T Consensus 91 ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii 169 (316)
T cd07417 91 YLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLI 169 (316)
T ss_pred EEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhhee
Confidence 99999999999999999999999999999999999999999999999999999998985 67899999999999999999
Q ss_pred cCcEEEecCCC-CCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEE
Q 021357 164 ESEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIA 242 (313)
Q Consensus 164 ~~~~~~vHgGi-~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iV 242 (313)
+++++|||||+ +|...++++++.+.|+.+.+..+.+.+++||||.+..+|.+++||.|+.||++++++||+++++++||
T Consensus 170 ~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~ii 249 (316)
T cd07417 170 NGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYII 249 (316)
T ss_pred CCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEE
Confidence 99999999999 55678899999999998888889999999999998888999999999999999999999999999999
Q ss_pred eeccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcC-CCceEEEEeecCCCC
Q 021357 243 RAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDD-CRSHTFIQFEPAPRR 299 (313)
Q Consensus 243 rGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~-~~~~~~~~~~~~~~~ 299 (313)
|||+++++||++.++++++|||||++||+..+|.||+|.|++ +.+++|++|++.|.+
T Consensus 250 R~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 250 RSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred ECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 999999999999999999999999999999999999999998 889999999988755
No 10
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.3e-64 Score=464.71 Aligned_cols=282 Identities=39% Similarity=0.802 Sum_probs=266.0
Q ss_pred cHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCce
Q 021357 13 DLDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNY 84 (313)
Q Consensus 13 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~ 84 (313)
.++.+|+++.+.. .++++++.+||++|++++.+||++++++.+++|||||||++.+|.++|+..+.++.+++
T Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~ 82 (294)
T PTZ00244 3 LVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNY 82 (294)
T ss_pred hHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccE
Confidence 4566677765433 58899999999999999999999999999999999999999999999999999988999
Q ss_pred EEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEc
Q 021357 85 LFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVE 164 (313)
Q Consensus 85 vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 164 (313)
+|||||||||++|.|++.+++.+|..+|.++++||||||.+.++..++|..++..+|+ ..++..+.++|++||++++++
T Consensus 83 lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 83 LFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEec
Confidence 9999999999999999999999999999999999999999999999999999999995 678999999999999999999
Q ss_pred CcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEe
Q 021357 165 SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243 (313)
Q Consensus 165 ~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVr 243 (313)
++++|||||++|.+.++++++.++|+.+.+..+++.|++||||.. ..+|.+++||.|+.||++++++||+++++++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 999999999999999999999999999999999999999999986 5789999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeec
Q 021357 244 AHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEP 295 (313)
Q Consensus 244 GHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~ 295 (313)
|||++++||++.++++++|||||++||+..+|.||+|.|+++..++|..|.+
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999988754
No 11
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-66 Score=449.66 Aligned_cols=313 Identities=78% Similarity=1.340 Sum_probs=306.8
Q ss_pred CCCCCCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCC
Q 021357 1 MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCP 80 (313)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~ 80 (313)
|.|+..++-.+..++.+|+++.++..+++.++..+++.|+++|.++.++.+...+++|+||+||++++|.++++..|..|
T Consensus 7 ~ra~~~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~p 86 (319)
T KOG0371|consen 7 MRARILATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAP 86 (319)
T ss_pred ccccccccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcE
Q 021357 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLT 160 (313)
Q Consensus 81 ~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~ 160 (313)
+..++|+|||||||++|.|++.++.++|.+||++|.+||||||...+...|+|++||.+|||...+|..+.+.|..+|+.
T Consensus 87 dtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~t 166 (319)
T KOG0371|consen 87 DTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLT 166 (319)
T ss_pred CcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceE
Q 021357 161 ALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKL 240 (313)
Q Consensus 161 ~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~ 240 (313)
+.|+++++|+|||++|++..++.++.+.|.+++|.++.++|+||+||+++.+|..+|||.++.||.+..++|..++|+++
T Consensus 167 ali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lsl 246 (319)
T KOG0371|consen 167 ALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSL 246 (319)
T ss_pred hhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCCCCCCCCCCCCCCCCCC
Q 021357 241 IARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 313 (313)
Q Consensus 241 iVrGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (313)
+-|.|+-+.+||.+.....++||||+|+|||+++|.+|++++++.....|.||+|+|..-+..+.+++||||+
T Consensus 247 isRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 247 ISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred hHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996
No 12
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=4.4e-64 Score=465.62 Aligned_cols=272 Identities=49% Similarity=0.962 Sum_probs=265.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcC-CCCCCceEEeeccccCCCCcHHHHHHH
Q 021357 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVETVTLL 104 (313)
Q Consensus 26 ~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~-~~~~~~~vflGD~vDrG~~s~e~l~~l 104 (313)
.++++++.+|+..+.+++..+|++++.++||.|+|||||++.+|.+++...+ +++..+|||||||||||++|+|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4899999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhh
Q 021357 105 VALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184 (313)
Q Consensus 105 ~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i 184 (313)
+++|.+||+++++||||||.+.++..|||++||..+|+...+|..+.+.|+.||++++++++++|+|||++|.+.+++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997678999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEE
Q 021357 185 RNFDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTI 263 (313)
Q Consensus 185 ~~~~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti 263 (313)
+.+.||.+.++.++++|++|+||+. ..+|..+.||.++.||++++++||+++++++||||||++++||+++.+++++||
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTI 270 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTI 270 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEE
Confidence 9999999999999999999999987 589999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCC
Q 021357 264 FSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAP 297 (313)
Q Consensus 264 ~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~ 297 (313)
||||+||+.+.|.||+|.+|++..+.|..++|.+
T Consensus 271 FSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~ 304 (331)
T KOG0374|consen 271 FSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEG 304 (331)
T ss_pred ecCchhccccCCceEEEEECCCCeEEEEEecccc
Confidence 9999999999999999999999999999999953
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2.5e-63 Score=453.23 Aligned_cols=269 Identities=54% Similarity=0.994 Sum_probs=257.9
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHH
Q 021357 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA 106 (313)
Q Consensus 27 ~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~ 106 (313)
++++++.+||++|++++++||++++++++++|||||||++++|.++|+..+.++.+++||||||||||++++|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred hhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhh
Q 021357 107 LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRN 186 (313)
Q Consensus 107 l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~ 186 (313)
+|..+|.++++||||||.+.++..++|..++..+|+ ..++..+.++|+.||++++++++++|||||++|.+.++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6899999999999999999998999999999999999999999
Q ss_pred ccccccCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEec
Q 021357 187 FDRVQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFS 265 (313)
Q Consensus 187 ~~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S 265 (313)
++|+.+.+..+.+.+++|+||.. ..+|.+++||.++.||++++++||+++++++||||||++++||+..++++++||||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 99999888899999999999964 77899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcEEEEEEcCCCceEEEEeecC
Q 021357 266 APNYCYRCGNMASILEVDDCRSHTFIQFEPA 296 (313)
Q Consensus 266 ~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~ 296 (313)
|++||+.++|.||++.|+++.+++|.+|+|.
T Consensus 240 a~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 240 APNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999764
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.4e-60 Score=447.73 Aligned_cols=290 Identities=36% Similarity=0.588 Sum_probs=259.3
Q ss_pred CCCCcccHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccC----CceeEecCCCCCHHHHHHH
Q 021357 7 STDTTTDLDEQISQLMQC----------KPLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAEL 72 (313)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~a~~~~~~e~~~~~~~----~~i~viGDiHG~~~~l~~l 72 (313)
+.-|.+.++.|++.++.. ..++.+++..||++|+++|++||+++.++ .+++|||||||++.+|.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~l 84 (377)
T cd07418 5 GALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFL 84 (377)
T ss_pred CccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHH
Confidence 345788899999999644 45789999999999999999999999876 7999999999999999999
Q ss_pred HHHcCCCCC-CceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCC--chhHHH
Q 021357 73 FQIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKI 149 (313)
Q Consensus 73 L~~~~~~~~-~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~ 149 (313)
|+..+.++. ..+||||||||||++|+|++.+++.++..+|.++++||||||.+.++..++|..++..+|+. ..+++.
T Consensus 85 l~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~ 164 (377)
T cd07418 85 LEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRK 164 (377)
T ss_pred HHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHH
Confidence 999998765 45999999999999999999999999999999999999999999999999999999999975 368999
Q ss_pred HHHHHhhCCcEEEEcCcEEEecCCCC---------------------------CCccchhhhhhccccc-cCCCCC---c
Q 021357 150 FTDLFDYFPLTALVESEIFCLHGGLS---------------------------PSIETLDNIRNFDRVQ-EVPHEG---P 198 (313)
Q Consensus 150 ~~~~~~~lP~~~~i~~~~~~vHgGi~---------------------------p~~~~~~~i~~~~r~~-~~~~~~---~ 198 (313)
+.+||++||++++++++++||||||+ |.+.++++++.++|+. +.+..+ +
T Consensus 165 ~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i 244 (377)
T cd07418 165 CLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLI 244 (377)
T ss_pred HHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccc
Confidence 99999999999999989999999994 3456788888888863 555444 4
Q ss_pred cccccccCCCCCCCCCcC-CCCCccccCHHHHHHHHHhCCceEEEeeccc------------cccceEEecC---CeEEE
Q 021357 199 MCDLLWSDPDDRCGWGIS-PRGAGYTFGQDISEQFNHTNNLKLIARAHQL------------VMDGFNWAHE---QKVVT 262 (313)
Q Consensus 199 ~~~llW~dp~~~~~~~~~-~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~------------~~~G~~~~~~---~~~it 262 (313)
+.|+|||||....+|.++ +||.|+.||++++++||+++++++||||||+ +++||++.++ ++++|
T Consensus 245 ~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liT 324 (377)
T cd07418 245 PGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLIT 324 (377)
T ss_pred ceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEE
Confidence 689999999987777766 7999999999999999999999999999996 6799999886 99999
Q ss_pred EecCCCCC------CCCCCcEEEEEEcCC--CceEEEEeecC
Q 021357 263 IFSAPNYC------YRCGNMASILEVDDC--RSHTFIQFEPA 296 (313)
Q Consensus 263 i~S~~~~~------~~~~n~~avl~i~~~--~~~~~~~~~~~ 296 (313)
||||++|| +.++|+||++.|+++ ...+|.+|+..
T Consensus 325 vFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 325 LFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred EecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 99999999 578999999999754 57999999988
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=7.6e-61 Score=444.68 Aligned_cols=271 Identities=41% Similarity=0.759 Sum_probs=251.4
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCC--------CceEEeeccccCCCC
Q 021357 25 KPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPD--------TNYLFMGDYVDRGYY 96 (313)
Q Consensus 25 ~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~--------~~~vflGD~vDrG~~ 96 (313)
..++++++.+||++|++++++||+++++..+++||||||||+++|.++|+..+.++. .++||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 468999999999999999999999999999999999999999999999999887643 479999999999999
Q ss_pred cHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCC-----chhHHHHHHHHhhCCcEEEEcCcEEEec
Q 021357 97 SVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANIWKIFTDLFDYFPLTALVESEIFCLH 171 (313)
Q Consensus 97 s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~-----~~~~~~~~~~~~~lP~~~~i~~~~~~vH 171 (313)
|+|++.++++++..+|.++++||||||.+.++..++|..++..+|+. ..++..+.++|+.||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999888864 2588999999999999999998999999
Q ss_pred CCCCCCccchhhhhhccccc-cCCCCCccccccccCCCCC---CCCCcCC---CCCc--cccCHHHHHHHHHhCCceEEE
Q 021357 172 GGLSPSIETLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDISEQFNHTNNLKLIA 242 (313)
Q Consensus 172 gGi~p~~~~~~~i~~~~r~~-~~~~~~~~~~llW~dp~~~---~~~~~~~---rg~~--~~fg~~~~~~~l~~~~~~~iV 242 (313)
||++|.+.++++++.+.|+. ..+..+.+.+++||||... .+|.+++ ||.| +.||++++++||+++++++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999986 4456678999999999863 4666665 8888 799999999999999999999
Q ss_pred eeccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeec
Q 021357 243 RAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEP 295 (313)
Q Consensus 243 rGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~ 295 (313)
||||++++||+..++++++|||||++||+.++|.||++.|+++..+.|++++|
T Consensus 259 RgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 259 RAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999986
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.3e-56 Score=403.53 Aligned_cols=287 Identities=41% Similarity=0.751 Sum_probs=266.3
Q ss_pred cccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeecc
Q 021357 11 TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDY 90 (313)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~ 90 (313)
.+..+-+.+++.+..+++++..+.|+.++..+|++|++++++.+||.|+|||||++.+|.++++..|.+...+|+|||||
T Consensus 45 kP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDY 124 (517)
T KOG0375|consen 45 KPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDY 124 (517)
T ss_pred CcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccc
Confidence 46678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEe
Q 021357 91 VDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCL 170 (313)
Q Consensus 91 vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~v 170 (313)
||||..|+||+.+|.+||+.||+.+++||||||++.+...+.|..||..+| ...+++...+.|..||+++..++.++||
T Consensus 125 VDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCV 203 (517)
T KOG0375|consen 125 VDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCV 203 (517)
T ss_pred cccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEe
Confidence 999999999999999999999999999999999999999999999999999 5899999999999999999999999999
Q ss_pred cCCCCCCccchhhhhhccccccCCCCCccccccccCCCCC-------CCCC-cCCCCCccccCHHHHHHHHHhCCceEEE
Q 021357 171 HGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR-------CGWG-ISPRGAGYTFGQDISEQFNHTNNLKLIA 242 (313)
Q Consensus 171 HgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~-------~~~~-~~~rg~~~~fg~~~~~~~l~~~~~~~iV 242 (313)
|||++|.+.++++|+.++|..+.|..+..||+||+||.+. +-|. ++-||.+|.|...++.+||+.+++--||
T Consensus 204 HGGlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIi 283 (517)
T KOG0375|consen 204 HGGLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSII 283 (517)
T ss_pred cCCCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhh
Confidence 9999999999999999999999999999999999999752 1232 3469999999999999999999999999
Q ss_pred eeccccccceEEecC------CeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecCCCC
Q 021357 243 RAHQLVMDGFNWAHE------QKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRR 299 (313)
Q Consensus 243 rGHt~~~~G~~~~~~------~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 299 (313)
|+|+.++.||...-. ..+|||||||||.+.++|+||||.-+.+ ..-++||..+|.+
T Consensus 284 RAHEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHP 345 (517)
T KOG0375|consen 284 RAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHP 345 (517)
T ss_pred hhhhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCCCC
Confidence 999999999976543 4579999999999999999999987655 4677888888865
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-50 Score=369.37 Aligned_cols=295 Identities=30% Similarity=0.576 Sum_probs=259.5
Q ss_pred CCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----CCceeEecCCCCCHHHHHHHHHHcCCCCC-
Q 021357 7 STDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGGKCPD- 81 (313)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~----~~~i~viGDiHG~~~~l~~lL~~~~~~~~- 81 (313)
=....+++..+|++++..+++++..++.|+.+|++.|.+.|++-++ +..|.|+||+||.+++|.-+|-+.|++..
T Consensus 114 ~Pl~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~ 193 (631)
T KOG0377|consen 114 LPLRKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSS 193 (631)
T ss_pred cCcCchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCC
Confidence 3456678999999999999999999999999999999999999765 45799999999999999999999999865
Q ss_pred CceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCC--chhHHHHHHHHhhCCc
Q 021357 82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPL 159 (313)
Q Consensus 82 ~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~ 159 (313)
.-|||-||+||||.+|+|+|..|+++...||..+++-|||||..++|-.|||.+|...+|.. ..+..-+.++++.||+
T Consensus 194 npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi 273 (631)
T KOG0377|consen 194 NPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPI 273 (631)
T ss_pred CCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcch
Confidence 45999999999999999999999999999999999999999999999999999999999964 5688899999999999
Q ss_pred EEEEcCcEEEecCCCCCCccchhhhhhcccccc-----CCC---------C--------CccccccccCCCCCCCCCcC-
Q 021357 160 TALVESEIFCLHGGLSPSIETLDNIRNFDRVQE-----VPH---------E--------GPMCDLLWSDPDDRCGWGIS- 216 (313)
Q Consensus 160 ~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~-----~~~---------~--------~~~~~llW~dp~~~~~~~~~- 216 (313)
+.+++.++++|||||+.. ..++-+.+++|-.. .|. + ..+.|++|+||....++.+|
T Consensus 274 ~tiid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt 352 (631)
T KOG0377|consen 274 GTIIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNT 352 (631)
T ss_pred hhhcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCccc
Confidence 999999999999999754 34555544443211 110 1 13568999999987776655
Q ss_pred CCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcCCCceEEEEeecC
Q 021357 217 PRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPA 296 (313)
Q Consensus 217 ~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~~~~~~~~~~~~~ 296 (313)
-||.|.+||++.+.+||++++++++||+|++.++||++.++++++|||||+||...+.|+||++.+.......|.||...
T Consensus 353 ~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~ 432 (631)
T KOG0377|consen 353 LRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAA 432 (631)
T ss_pred ccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhh
Confidence 69999999999999999999999999999999999999999999999999999777789999999999999999999977
Q ss_pred CCCCCC
Q 021357 297 PRRGEP 302 (313)
Q Consensus 297 ~~~~~~ 302 (313)
..+.+.
T Consensus 433 k~t~~~ 438 (631)
T KOG0377|consen 433 KQTKRL 438 (631)
T ss_pred hhhhhh
Confidence 665443
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=3.3e-42 Score=324.54 Aligned_cols=291 Identities=37% Similarity=0.729 Sum_probs=265.3
Q ss_pred CcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc----CCceeEecCCCCCHHHHHHHHHHcCCCCC-Cce
Q 021357 10 TTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGGKCPD-TNY 84 (313)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~~----~~~i~viGDiHG~~~~l~~lL~~~~~~~~-~~~ 84 (313)
|.+.++.+.+.+.+...++....-.|++.+++++...+++++. ..++.++||+||++.++.+++...+.++. ..+
T Consensus 166 t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 166 TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 4455566666666777888899999999999999999998654 46799999999999999999999988764 569
Q ss_pred EEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEc
Q 021357 85 LFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVE 164 (313)
Q Consensus 85 vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~ 164 (313)
+|-||++|||..+.|+...++..+..+|++++++|||||...++..|+|..++..+|. ...+..+.+.|..||++..++
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~ 324 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLIN 324 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhc
Confidence 9999999999999999999999999999999999999999999999999999999995 455555669999999999999
Q ss_pred CcEEEecCCCC-CCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEe
Q 021357 165 SEIFCLHGGLS-PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243 (313)
Q Consensus 165 ~~~~~vHgGi~-p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVr 243 (313)
++++.+|||+. |.-..+++++++.|..+.+++++.++++|+||....+..++.||.|..||++++++||+.++++.|||
T Consensus 325 ~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~r 404 (476)
T KOG0376|consen 325 NKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIR 404 (476)
T ss_pred CceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhh
Confidence 99999999985 44557999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEEEEeecCCCCCC
Q 021357 244 AHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVD-DCRSHTFIQFEPAPRRGE 301 (313)
Q Consensus 244 GHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~-~~~~~~~~~~~~~~~~~~ 301 (313)
||+..+.||++.++|+++|+||+|+||...+|.||++.++ ++....|++|++.|...-
T Consensus 405 she~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~~ 463 (476)
T KOG0376|consen 405 SHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPDV 463 (476)
T ss_pred ccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCCC
Confidence 9999999999999999999999999999999999999999 678999999999997743
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=2.4e-35 Score=262.04 Aligned_cols=214 Identities=44% Similarity=0.757 Sum_probs=172.8
Q ss_pred eEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHH
Q 021357 57 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 136 (313)
Q Consensus 57 ~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e 136 (313)
+|||||||++++|.++|+.++..+.+.+|||||++|||+.+.+++.++.+++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888999999999999999999999999999876 7789999999999988776554432
Q ss_pred H--------HHHhCCchhHHHHHHHHhhCCcEEEEcC-cEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCC
Q 021357 137 C--------LRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 207 (313)
Q Consensus 137 ~--------~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp 207 (313)
. ...+.....+..+.+|+.++|+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 1 2233345677888899999999998876 99999999999876554443 2333445688999999
Q ss_pred CCCCCCC-cCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEE
Q 021357 208 DDRCGWG-ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILE 281 (313)
Q Consensus 208 ~~~~~~~-~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~ 281 (313)
.....+. .+.++. ++++.+.++..++.+.||+||||+..++.....+++++|||++.|++..++..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 7543322 222222 889999999999999999999999988765668889999999999776666666553
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.97 E-value=4.5e-29 Score=225.20 Aligned_cols=192 Identities=20% Similarity=0.309 Sum_probs=132.8
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC---------CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchh
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKC---------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 124 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~---------~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~ 124 (313)
+|++||||||||++.|.++|+.+++. +.+++|||||||||||+|.+|+++++++.. ++++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~--~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVE--KKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhh--CCCEEEEeCccHH
Confidence 57999999999999999999998873 467899999999999999999999998853 4579999999999
Q ss_pred hhhHhhhC-------ChHHHHHHhCC------chhHHHHHHHHhhCCcEEEEc-CcEEEecCCCCCCccc--hhhhhhcc
Q 021357 125 RQITQVYG-------FYDECLRKYGN------ANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIET--LDNIRNFD 188 (313)
Q Consensus 125 ~~~~~~~~-------~~~e~~~~~~~------~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~p~~~~--~~~i~~~~ 188 (313)
++++...+ ...++...|.. ..+.+.+.+|++++|++..++ ++++|||||++|.... .+++
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~---- 154 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKV---- 154 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhh----
Confidence 98875432 11234444432 235567889999999988764 5799999999876311 1111
Q ss_pred ccccCCCCCccccccccCC--------CC-CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCe
Q 021357 189 RVQEVPHEGPMCDLLWSDP--------DD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQK 259 (313)
Q Consensus 189 r~~~~~~~~~~~~llW~dp--------~~-~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~ 259 (313)
...++|++- .. ...|..+. .+.+.+|.||||+...... ++
T Consensus 155 ----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~~---~~ 203 (245)
T PRK13625 155 ----------QTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRFV---NH 203 (245)
T ss_pred ----------hhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCccceec---CC
Confidence 123344421 11 11222111 2446899999999765433 45
Q ss_pred EEEEecCCCCCCCCCCcEEEEEEcCCC
Q 021357 260 VVTIFSAPNYCYRCGNMASILEVDDCR 286 (313)
Q Consensus 260 ~iti~S~~~~~~~~~n~~avl~i~~~~ 286 (313)
.+.|+|+..| .++. +++.++++.
T Consensus 204 ~i~IDtGa~~---gG~L-tal~l~~~~ 226 (245)
T PRK13625 204 TVNIDTGCVF---GGRL-TALRYPEME 226 (245)
T ss_pred eEEEECcCcc---CCEE-EEEECCCCc
Confidence 8999988544 2334 444566543
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=8.7e-29 Score=218.01 Aligned_cols=179 Identities=20% Similarity=0.278 Sum_probs=132.4
Q ss_pred eEecCCCCCHHHHHHHHHHcCC--------CCCCceEEeeccccCCCCcHHHHHHHHHhhhh---CCCcEEEEcCCchhh
Q 021357 57 TICGDIHGQFHDLAELFQIGGK--------CPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YPQRITILRGNHESR 125 (313)
Q Consensus 57 ~viGDiHG~~~~l~~lL~~~~~--------~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~---~p~~v~~lrGNHE~~ 125 (313)
+||||||||+++|.++|+.++. .+.+.+|++||+||||+++.++++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998875 35788999999999999999999999999754 356799999999999
Q ss_pred hhHhhhCChH-HHHHHhC--------CchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhhccccccCCCC
Q 021357 126 QITQVYGFYD-ECLRKYG--------NANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE 196 (313)
Q Consensus 126 ~~~~~~~~~~-e~~~~~~--------~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~ 196 (313)
.++..+.+.. ....... .......+.+|++++|+...++ +++|||||++|.
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~------------------- 140 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPL------------------- 140 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHH-------------------
Confidence 9875443321 1111110 0112345689999999998875 799999998443
Q ss_pred CccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCC
Q 021357 197 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 269 (313)
Q Consensus 197 ~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~ 269 (313)
|++.-. ...... .-+...++++++.++.+++|+||||++.+....+++++++||++..-
T Consensus 141 -------w~r~y~----~~~~~~---~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~~ 199 (208)
T cd07425 141 -------WYRGYS----KETSDK---ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMSK 199 (208)
T ss_pred -------HhhHhh----hhhhhc---cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCcch
Confidence 321100 000000 00124678899999999999999999988766889999999987543
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.96 E-value=1.7e-27 Score=213.56 Aligned_cols=201 Identities=18% Similarity=0.332 Sum_probs=131.6
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCC----------CCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCch
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKCP----------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~~----------~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE 123 (313)
+||.||||||||+++|.++|+.+++.+ .+++|||||+|||||+|.+|+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999997653 468999999999999999999999998754 46999999999
Q ss_pred hhhhHhhhCC-------hHHHHHHhC--CchhHHHHHHHHhhCCcEEEEc-CcEEEecCCCCCCccchhhhhhccccccC
Q 021357 124 SRQITQVYGF-------YDECLRKYG--NANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIRNFDRVQEV 193 (313)
Q Consensus 124 ~~~~~~~~~~-------~~e~~~~~~--~~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~p~~~~~~~i~~~~r~~~~ 193 (313)
.++++...+. ..++...+. ...+.....+||++||+...++ ++++|||||+++.+..... .
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~-~-------- 149 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDS-K-------- 149 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccc-h--------
Confidence 9988754321 012233332 2345677889999999988765 4799999998765321110 0
Q ss_pred CCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHH-HhCCceEEEeeccccccceEEecCCeEEEEecCCCCCCC
Q 021357 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN-HTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYR 272 (313)
Q Consensus 194 ~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l-~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~~~~ 272 (313)
......+|.+..... ...+. + ....|. ...+.+.+|+||||++..... +..+.|++++-|
T Consensus 150 ---~~~~~~~~~~~~~~~----~~~~~---~---~~~~~~~~~~~~~~vv~GHt~~~~~~~~---~~~i~IDtGav~--- 210 (234)
T cd07423 150 ---RVRSFALYGDTTGET----DEFGL---P---VRRDWAKEYRGDALVVYGHTPVPEPRWL---NNTINIDTGCVF--- 210 (234)
T ss_pred ---hheeeeecccccCCc----CCCCC---c---cchhhHhhCCCCeEEEECCCCCccceEe---CCEEEEECCCCC---
Confidence 001122343221000 00000 0 000111 123567899999998765433 347899988655
Q ss_pred CCCcEEEEEEcCC
Q 021357 273 CGNMASILEVDDC 285 (313)
Q Consensus 273 ~~n~~avl~i~~~ 285 (313)
.++.+|+ .+++.
T Consensus 211 gG~Lt~l-~~~~~ 222 (234)
T cd07423 211 GGKLTAL-RYPER 222 (234)
T ss_pred CCcceEE-ECCCC
Confidence 2444544 45544
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.95 E-value=1.3e-27 Score=218.24 Aligned_cols=218 Identities=18% Similarity=0.285 Sum_probs=145.5
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC-CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhC
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
|+++||||||||+++|.++|+.+++. ..+.++|+||+|||||+|.++++++.++. .++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999864 56789999999999999999999999873 46999999999998876555
Q ss_pred Ch----HHHHHHhCCchhHHHHHHHHhhCCcEEEE-cCcEEEecCCCCCCccchhhhhhccccccCCCC----Ccccccc
Q 021357 133 FY----DECLRKYGNANIWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE----GPMCDLL 203 (313)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~----~~~~~ll 203 (313)
.. .....++........+.+|++++|+...+ ++++++||||++|.+...+........+..... ..+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 32 12333443344567789999999998776 568999999999988544433333222221111 1223344
Q ss_pred ccCCCCCCCCCcCCCCCc-cccCHHHH--HHHHHh-----------------------------CCceEEEeeccccccc
Q 021357 204 WSDPDDRCGWGISPRGAG-YTFGQDIS--EQFNHT-----------------------------NNLKLIARAHQLVMDG 251 (313)
Q Consensus 204 W~dp~~~~~~~~~~rg~~-~~fg~~~~--~~~l~~-----------------------------~~~~~iVrGHt~~~~G 251 (313)
|+.|. .|.+.-.|.. ..+..+++ .+||.. ..-..||.||.....|
T Consensus 157 ~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 157 GNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 44442 3433333321 11111111 111221 1235799999998778
Q ss_pred eEEecCCeEEEEecCCCCCCCCCCcEEEEEEcC
Q 021357 252 FNWAHEQKVVTIFSAPNYCYRCGNMASILEVDD 284 (313)
Q Consensus 252 ~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~ 284 (313)
... ...++.+||+.-+ ++.=+++++++
T Consensus 234 ~~~--~~~~~~LDtGcvw----gg~Lta~~l~~ 260 (275)
T PRK00166 234 LTT--PPNIIALDTGCVW----GGKLTALRLED 260 (275)
T ss_pred ccC--CCCeEEeeccccc----CCeEEEEEeCC
Confidence 765 5679999987433 33445667763
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.95 E-value=1.9e-27 Score=211.52 Aligned_cols=116 Identities=23% Similarity=0.345 Sum_probs=92.8
Q ss_pred eEecCCCCCHHHHHHHHHHcCCC--------CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhH
Q 021357 57 TICGDIHGQFHDLAELFQIGGKC--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 128 (313)
Q Consensus 57 ~viGDiHG~~~~l~~lL~~~~~~--------~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~ 128 (313)
+||||||||++.|.++|+.+++. +.+++|||||||||||+|.+|+++++++... .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 69999999999999999998764 4678999999999999999999999998643 4799999999999876
Q ss_pred hhhCC------h-----------HHHHHHhC-CchhHHHHHHHHhhCCcEEEEcCcEEEecCCCC
Q 021357 129 QVYGF------Y-----------DECLRKYG-NANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 175 (313)
Q Consensus 129 ~~~~~------~-----------~e~~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~ 175 (313)
...+. . .+....+. .........+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43221 0 12233332 234457789999999999875 58999999985
No 25
>PHA02239 putative protein phosphatase
Probab=99.95 E-value=4.5e-27 Score=210.37 Aligned_cols=175 Identities=21% Similarity=0.295 Sum_probs=127.9
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC--CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhh
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~--~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 131 (313)
|++++||||||+++.|.++++.+... +.+.+||+|||||||++|.+++..++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57999999999999999999988543 468899999999999999999999998754 345799999999999775432
Q ss_pred CC--------------hHHHHHHhCCc------------------------------hhHHHHHHHHhhCCcEEEEcCcE
Q 021357 132 GF--------------YDECLRKYGNA------------------------------NIWKIFTDLFDYFPLTALVESEI 167 (313)
Q Consensus 132 ~~--------------~~e~~~~~~~~------------------------------~~~~~~~~~~~~lP~~~~i~~~~ 167 (313)
.. ..+++..|+.. .....+.+|+++||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 10 12344555421 0224556699999999885 589
Q ss_pred EEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccc
Q 021357 168 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQL 247 (313)
Q Consensus 168 ~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~ 247 (313)
+|||||+.|..+..+|- ..+++|.+. |. +.. .-+.||.||||
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~-----f~--~~~-----------------~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD-----FQ--PRK-----------------DGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc-----cC--CCC-----------------CCcEEEECCCC
Confidence 99999998886533332 268899965 21 111 12689999999
Q ss_pred cccceEEecCCeEEEEecCCCC
Q 021357 248 VMDGFNWAHEQKVVTIFSAPNY 269 (313)
Q Consensus 248 ~~~G~~~~~~~~~iti~S~~~~ 269 (313)
+..+.... .++.|.|||+..|
T Consensus 201 ~~~~~~~~-~~~~I~IDtGa~~ 221 (235)
T PHA02239 201 TDSGEVEI-NGDMLMCDVGAVF 221 (235)
T ss_pred CCCCcccc-cCCEEEeecCccc
Confidence 97654333 3557999987554
No 26
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.95 E-value=4.5e-27 Score=208.67 Aligned_cols=180 Identities=17% Similarity=0.172 Sum_probs=122.7
Q ss_pred cCCceeEecCCCCCHHHHHHHHHHcCCC-CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhh
Q 021357 52 VKSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV 130 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~ 130 (313)
..+|++||||||||+++|.++|+.+++. ..++++||||+|||||+|.+|++++.+. ++++|+||||.++++..
T Consensus 15 ~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~ 88 (218)
T PRK11439 15 QWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDAL 88 (218)
T ss_pred CCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHH
Confidence 4569999999999999999999999876 5778999999999999999999999762 58899999999988754
Q ss_pred hCChHHHHHHhC--------C--chhHHHHHHHHhhCCcEEEEc---CcEEEecCCCCCCccchhhhhhccccccCCCCC
Q 021357 131 YGFYDECLRKYG--------N--ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197 (313)
Q Consensus 131 ~~~~~e~~~~~~--------~--~~~~~~~~~~~~~lP~~~~i~---~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~ 197 (313)
.+.....+...+ . ......+.+|+++||+...+. +++++||||++....... . + .
T Consensus 89 ~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~~~~~--~----~------~ 156 (218)
T PRK11439 89 ASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADVYEWQ--K----D------V 156 (218)
T ss_pred HCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCchhhh--c----c------C
Confidence 321111111111 0 123456678999999987653 469999999843221100 0 0 0
Q ss_pred ccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCC
Q 021357 198 PMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 269 (313)
Q Consensus 198 ~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~ 269 (313)
...+++|+++.....+. .+ ...+.+.+|+||||++.... .+..+.|++++-|
T Consensus 157 ~~~~~~w~r~~~~~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 157 DLHQVLWSRSRLGERQK--GQ---------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred CccceEEcChhhhhccc--cc---------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 12457887552211110 00 11255789999999876543 2458999988655
No 27
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.95 E-value=1.3e-26 Score=210.41 Aligned_cols=198 Identities=17% Similarity=0.260 Sum_probs=138.5
Q ss_pred ceeEecCCCCCHHHHHHHHHHcCCC------CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCC-cEEEEcCCchhhhh
Q 021357 55 PVTICGDIHGQFHDLAELFQIGGKC------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQI 127 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~lL~~~~~~------~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~-~v~~lrGNHE~~~~ 127 (313)
++++||||||+++.|.++|+.+... ..+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999876421 2456999999999999999999999999988875 68899999998876
Q ss_pred HhhhC-----------------------------------------C----------------------hHHHHHHhCCc
Q 021357 128 TQVYG-----------------------------------------F----------------------YDECLRKYGNA 144 (313)
Q Consensus 128 ~~~~~-----------------------------------------~----------------------~~e~~~~~~~~ 144 (313)
..... | ..++..+||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 54321 0 01334455422
Q ss_pred --------hhHHHHHHHHhhCCcEEEEcCcE-------------EEecCCCCCCccchhhhhhcc-ccccCCCCCccccc
Q 021357 145 --------NIWKIFTDLFDYFPLTALVESEI-------------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCDL 202 (313)
Q Consensus 145 --------~~~~~~~~~~~~lP~~~~i~~~~-------------~~vHgGi~p~~~~~~~i~~~~-r~~~~~~~~~~~~l 202 (313)
.+.....+||++||..... +++ +|||||+.|..+..+|.+.+. +....|. .++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 2345678899999998874 366 999999999998777776543 2222222 378
Q ss_pred cccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEE
Q 021357 203 LWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEV 282 (313)
Q Consensus 203 lW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i 282 (313)
+|.+... ...++... ..-.+||.||+.. ....+..|.|+++..|. +...|++.|
T Consensus 238 l~~R~~f----~~~~~~~~--------------~~~~~VVhGHt~~-----~~~~~~Ri~iDtGa~~~---~~l~aa~vl 291 (304)
T cd07421 238 LSGRKNV----WNIPQELA--------------DKKTIVVSGHHGK-----LHIDGLRLIIDEGGGFD---DRPIAAIVL 291 (304)
T ss_pred cccchhh----hcCccccc--------------CCCeEEEECCCCC-----ceecCCEEEEECCCCcC---CceeEEEEe
Confidence 8886532 11222210 0127999999932 34456689999986663 445566555
Q ss_pred c
Q 021357 283 D 283 (313)
Q Consensus 283 ~ 283 (313)
-
T Consensus 292 p 292 (304)
T cd07421 292 P 292 (304)
T ss_pred c
Confidence 4
No 28
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.94 E-value=1e-26 Score=210.77 Aligned_cols=128 Identities=20% Similarity=0.297 Sum_probs=104.8
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC-CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhC
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
|+++||||||||+++|.++|+++++. ..++++|+||+|||||+|++|++++.++. .++++|+||||.++++...+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57899999999999999999999875 46889999999999999999999999875 35889999999999887666
Q ss_pred Ch----HHHHHHhCCchhHHHHHHHHhhCCcEEEEc-CcEEEecCCCCCCccchhhhh
Q 021357 133 FY----DECLRKYGNANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIR 185 (313)
Q Consensus 133 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~p~~~~~~~i~ 185 (313)
+. .+....+.......++.+|++++|+..... .++++|||||+|.++..+...
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~ 134 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKE 134 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHH
Confidence 42 223333334566788999999999987654 369999999999996544443
No 29
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.94 E-value=1.2e-26 Score=209.85 Aligned_cols=125 Identities=23% Similarity=0.328 Sum_probs=102.5
Q ss_pred eeEecCCCCCHHHHHHHHHHcCCC-CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCCh
Q 021357 56 VTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (313)
Q Consensus 56 i~viGDiHG~~~~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (313)
++||||||||+++|+++|+.+++. +.+.++|+||+|||||+|++|++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999876 57889999999999999999999999986 4699999999999887655532
Q ss_pred ----HHHHHHhCCchhHHHHHHHHhhCCcEEEEcC-cEEEecCCCCCCccchhhh
Q 021357 135 ----DECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNI 184 (313)
Q Consensus 135 ----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~~~vHgGi~p~~~~~~~i 184 (313)
.+...++.......++.+||+++|+...+++ ++++|||||+|.++..+..
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~~~ 131 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQAL 131 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHHHH
Confidence 1233333334456788999999999988764 7999999999998544433
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.94 E-value=2.6e-25 Score=195.87 Aligned_cols=190 Identities=20% Similarity=0.289 Sum_probs=128.2
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC-CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhC
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
+||++||||||++.+|+++++.++.. ..+.++++||++|||+++.++++++.+ .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998764 467899999999999999999998875 25899999999998876543
Q ss_pred --ChHHHHHHhCCc--------hhHHHHHHHHhhCCcEEEEc---CcEEEecCCCCCCccchhhhhhccccccCCCCCcc
Q 021357 133 --FYDECLRKYGNA--------NIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPM 199 (313)
Q Consensus 133 --~~~e~~~~~~~~--------~~~~~~~~~~~~lP~~~~i~---~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~ 199 (313)
...+.+.+.+.. .......+||++||+...++ .++++||||+++.... .... + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~~-~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDWS-DGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchhh-hhhh---c--cccCcccc
Confidence 222333333321 13456788999999988764 3699999998655311 1100 0 11112234
Q ss_pred ccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCCCCCCCCcEEE
Q 021357 200 CDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASI 279 (313)
Q Consensus 200 ~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~av 279 (313)
.+++|+++........ ..-+.++||.||||.+..... +..+.|++++-+ .+..+|+
T Consensus 149 ~~~~w~~~~~~~~~~~------------------~~~~~~~iV~GHTh~~~~~~~---~~~i~ID~Gsv~---gg~Lt~~ 204 (207)
T cd07424 149 EELLWSRTRIQKAQTQ------------------PIKGVDAVVHGHTPVKRPLRL---GNVLYIDTGAVF---DGNLTLL 204 (207)
T ss_pred eeeeeccchhhhcCcc------------------ccCCCCEEEECCCCCCcceEE---CCEEEEECCCCC---CCeEEEE
Confidence 6688886532111000 011457899999998765443 346888877443 3455554
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.92 E-value=7.2e-24 Score=188.11 Aligned_cols=180 Identities=17% Similarity=0.165 Sum_probs=117.0
Q ss_pred CCceeEecCCCCCHHHHHHHHHHcCCC-CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhh
Q 021357 53 KSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 131 (313)
..|++||||||||+++|+++|+.+.+. ..+.++|+||+|||||+|.++++++.+ .++++|+||||.++++...
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFE 87 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHh
Confidence 459999999999999999999998854 467889999999999999999998864 2588999999999886542
Q ss_pred CChHHHHHHhCC------c----hhHHHHHHHHhhCCcEEEEc---CcEEEecCCCCCCccchhhhhhccccccCCCCCc
Q 021357 132 GFYDECLRKYGN------A----NIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198 (313)
Q Consensus 132 ~~~~e~~~~~~~------~----~~~~~~~~~~~~lP~~~~i~---~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~ 198 (313)
.-....+...+. . .......+||++||+...+. +++++||||++... ..... . ..
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~~--~~~~~----~------~~ 155 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPGDE--YDFGK----E------IA 155 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCch--hhhcc----c------cc
Confidence 111111111110 1 12234456999999987653 46999999984321 11000 0 01
Q ss_pred cccccccCCCCCCCCCcCCCCCccccCHHHHHHHH-HhCCceEEEeeccccccceEEecCCeEEEEecCCCC
Q 021357 199 MCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN-HTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 269 (313)
Q Consensus 199 ~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l-~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~ 269 (313)
..+++|.++.....+. .+. ...+.+++|+||||.+.-... + ..+.|++++.|
T Consensus 156 ~~~~~w~r~~~~~~~~----------------~~~~~~~~~~~vv~GHTh~~~~~~~--~-~~i~IDtGs~~ 208 (218)
T PRK09968 156 ESELLWPVDRVQKSLN----------------GELQQINGADYFIFGHMMFDNIQTF--A-NQIYIDTGSPK 208 (218)
T ss_pred hhhceeCcHHHhhCcc----------------ccccccCCCCEEEECCCCcCcceeE--C-CEEEEECCCCC
Confidence 2355786442111110 011 123568999999998653322 3 36888887544
No 32
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.53 E-value=2.4e-13 Score=113.80 Aligned_cols=59 Identities=20% Similarity=0.362 Sum_probs=48.5
Q ss_pred ceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
||.++||+||+.+.+.++++.+.. .+.++++||++++++... ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 589999999999999999998755 678999999999998654 111 23499999999975
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.52 E-value=1.1e-13 Score=114.14 Aligned_cols=160 Identities=19% Similarity=0.201 Sum_probs=99.8
Q ss_pred CceeEecCCCCCHHHH----HHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHH--HHhhhhCCCcEEEEcCCchhhhh
Q 021357 54 SPVTICGDIHGQFHDL----AELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYPQRITILRGNHESRQI 127 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l----~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l--~~l~~~~p~~v~~lrGNHE~~~~ 127 (313)
+||++|||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4899999999999987 44444455566788899999999999877766544 33344445579999999999876
Q ss_pred HhhhCChHHHHHH---------------------------------hCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCC
Q 021357 128 TQVYGFYDECLRK---------------------------------YGNANIWKIFTDLFDYFPLTALVESEIFCLHGGL 174 (313)
Q Consensus 128 ~~~~~~~~e~~~~---------------------------------~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi 174 (313)
............. ............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 5432211111100 0000111222233333333344455799999987
Q ss_pred CCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeecccc
Q 021357 175 SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 248 (313)
Q Consensus 175 ~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~ 248 (313)
.+........ .......+.+..+++..++++++.||++.
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 6543211110 11234567889999999999999999985
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.50 E-value=6.2e-13 Score=114.69 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=56.3
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCC--------cHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~--------s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
|||.++||+||++.++.++++.+...+.+.++++||++|+|++ +.++++.+.++. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 6899999999999999999998766667889999999999873 456666665542 3599999999975
Q ss_pred h
Q 021357 126 Q 126 (313)
Q Consensus 126 ~ 126 (313)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.48 E-value=5.3e-13 Score=112.38 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=50.1
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCC-CCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
|||.++||+||+..++..+++..... +.+.++++||++ +.+++..+.++. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 68999999999998888777766655 578888999998 357777776543 2499999999973
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.46 E-value=1.3e-12 Score=108.73 Aligned_cols=137 Identities=20% Similarity=0.281 Sum_probs=86.9
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCC
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 133 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~ 133 (313)
|||+++||+|++..++.++++.+ ...+.++++||++++ .++++.+... .+++++||||...+......
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999988 346778899999993 6777777555 39999999997653321110
Q ss_pred hHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCC
Q 021357 134 YDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGW 213 (313)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~ 213 (313)
.. +....... .-..+++++||.....
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 00 11111111 1134799999854220
Q ss_pred CcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecC
Q 021357 214 GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSA 266 (313)
Q Consensus 214 ~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~ 266 (313)
..+.+.+.+.+...++++++.||++.+.-.. ..+..+++..|.
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~ 137 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSI 137 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GS
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcC
Confidence 1234456677778999999999999865443 334555666654
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.31 E-value=1.6e-11 Score=100.71 Aligned_cols=118 Identities=19% Similarity=0.178 Sum_probs=78.3
Q ss_pred ceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcH--HHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhC
Q 021357 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~--e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
||.++||+||++. .....+.+.++++||+++++.... +.++++.+++ . ..+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 5899999999987 123345677888999999886432 2445554442 1 236789999995411
Q ss_pred ChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCC
Q 021357 133 FYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCG 212 (313)
Q Consensus 133 ~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~ 212 (313)
.-+.+++++||.+.+.. +..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~----------------------~~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHL----------------------DLVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCc----------------------ccccc-------
Confidence 11447999998431110 00000
Q ss_pred CCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021357 213 WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (313)
Q Consensus 213 ~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~ 253 (313)
....|.+.+.+++++.+.++++.||++.+.|+.
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123456778888899999999999999987775
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.27 E-value=7.7e-11 Score=105.26 Aligned_cols=157 Identities=19% Similarity=0.231 Sum_probs=96.8
Q ss_pred ceeEecCCCCCHHHHH-HHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhh---
Q 021357 55 PVTICGDIHGQFHDLA-ELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV--- 130 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~-~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~--- 130 (313)
||+++|||||++.... +.++ ..+.|.++++||+++. +.+++..+.++. ..+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~---~~~pD~Vl~~GDi~~~---~~~~~~~l~~l~----~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH---LLQPDLVLFVGDFGNE---SVQLVRAISSLP----LPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh---ccCCCEEEECCCCCcC---hHHHHHHHHhCC----CCeEEEcCCCcccccccccch
Confidence 6899999999987642 2333 3345788999999864 567777666542 348999999998653200
Q ss_pred ---------------------------------hCC--------hH-HHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEE
Q 021357 131 ---------------------------------YGF--------YD-ECLRKYGNANIWKIFTDLFDYFPLTALVESEIF 168 (313)
Q Consensus 131 ---------------------------------~~~--------~~-e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~ 168 (313)
.+| .+ ++...|+..+..+.+...++.++.+.....+++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 000 01 344455555666777777888863333334799
Q ss_pred EecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCC----ceEEEee
Q 021357 169 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNN----LKLIARA 244 (313)
Q Consensus 169 ~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~----~~~iVrG 244 (313)
+.|+++.-.....+.+ | .+.|.+. +-.+|...+.+.++... .++++.|
T Consensus 152 iaH~~~~G~g~~~~~~---------------c---------g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 152 LAHNGPSGLGSDAEDP---------------C---------GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred EeCcCCcCCCcccccc---------------c---------ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 9999875332111110 1 1223221 23467777666666544 7999999
Q ss_pred ccccc
Q 021357 245 HQLVM 249 (313)
Q Consensus 245 Ht~~~ 249 (313)
|.+..
T Consensus 204 H~H~~ 208 (238)
T cd07397 204 HMHHR 208 (238)
T ss_pred CccCc
Confidence 99865
No 39
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.25 E-value=2.6e-10 Score=98.16 Aligned_cols=126 Identities=18% Similarity=0.265 Sum_probs=81.3
Q ss_pred ceeEecCCC-CCHH-----HHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhH
Q 021357 55 PVTICGDIH-GQFH-----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 128 (313)
Q Consensus 55 ~i~viGDiH-G~~~-----~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~ 128 (313)
+|.||||+| |... .+.++++. .+.+.++.+||+++ .++++++..++ ..+++++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 489999999 5533 24444433 45678889999987 67777776653 24999999999631
Q ss_pred hhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEE---cCcEEEecCCCCCCccchhhhhhccccccCCCCCcccccccc
Q 021357 129 QVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWS 205 (313)
Q Consensus 129 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~ 205 (313)
.+|....+ +.+++++||-.-.. |
T Consensus 67 ---------------------------~lp~~~~~~~~g~~i~l~HG~~~~~--------------------------~- 92 (178)
T cd07394 67 ---------------------------NYPETKVITVGQFKIGLIHGHQVVP--------------------------W- 92 (178)
T ss_pred ---------------------------cCCCcEEEEECCEEEEEEECCcCCC--------------------------C-
Confidence 34543332 33899999832000 0
Q ss_pred CCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCC
Q 021357 206 DPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAP 267 (313)
Q Consensus 206 dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~ 267 (313)
...+.+.++.+..++++++.|||+.+.- ....+..+++-.|..
T Consensus 93 ------------------~~~~~~~~~~~~~~~dvii~GHTH~p~~-~~~~g~~viNPGSv~ 135 (178)
T cd07394 93 ------------------GDPDSLAALQRQLDVDILISGHTHKFEA-FEHEGKFFINPGSAT 135 (178)
T ss_pred ------------------CCHHHHHHHHHhcCCCEEEECCCCcceE-EEECCEEEEECCCCC
Confidence 0123455566678889999999998643 333345566667654
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.22 E-value=6e-10 Score=99.09 Aligned_cols=72 Identities=11% Similarity=0.163 Sum_probs=59.2
Q ss_pred CCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
.+||.++||+||++.+++++++.....+.|.+|++||++++|+...++..++..+.... ..+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 46799999999999999999997765667889999999999976767777776665432 2499999999975
No 41
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.14 E-value=4.4e-10 Score=96.33 Aligned_cols=66 Identities=23% Similarity=0.323 Sum_probs=47.0
Q ss_pred eeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCc-HHHHHHHHHhhhhCCCcEEEEcCCchhhhh
Q 021357 56 VTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRYPQRITILRGNHESRQI 127 (313)
Q Consensus 56 i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s-~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~ 127 (313)
|.++||+||++.++.. ..+...+.|.+|++||+++++... .+.+..+.++ +..+++++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHHH
Confidence 5789999999999877 333444567888999999998753 3333333332 3349999999997543
No 42
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.11 E-value=1.6e-09 Score=97.63 Aligned_cols=212 Identities=14% Similarity=0.116 Sum_probs=107.3
Q ss_pred CceeEecCCCCCH------HHHHHHHHHcCCCCCCceEEeeccccC--C-----CCcHHHHHHHHHhhhhCCCcEEEEcC
Q 021357 54 SPVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDR--G-----YYSVETVTLLVALKVRYPQRITILRG 120 (313)
Q Consensus 54 ~~i~viGDiHG~~------~~l~~lL~~~~~~~~~~~vflGD~vDr--G-----~~s~e~l~~l~~l~~~~p~~v~~lrG 120 (313)
|++++|||+|... .++.+.|+.. ..+.+.++++||++|. | +...++++++.+++.. +..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 6899999999542 2455555432 2346788899999985 2 2245677777777643 235999999
Q ss_pred CchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCC--cEEEEc-CcEEEecCCCCCCcc-chhhhhhcccccc---C
Q 021357 121 NHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFP--LTALVE-SEIFCLHGGLSPSIE-TLDNIRNFDRVQE---V 193 (313)
Q Consensus 121 NHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP--~~~~i~-~~~~~vHgGi~p~~~-~~~~i~~~~r~~~---~ 193 (313)
|||..... ...+..+. ..+| ....++ .+++++||-..+.-+ .....+++-|-.. .
T Consensus 79 NHD~~~~~-------~~~~~~g~-----------~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~ 140 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM-----------TLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWL 140 (241)
T ss_pred CCchhhhH-------HHHHhCCC-----------EEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHH
Confidence 99964311 11111110 1122 222333 469999997654211 1222222111000 0
Q ss_pred CCCCccccccccCCCCCCC-CCcCC-CC-CccccCHHHHHHHHHhCCceEEEeeccccccceEEecCC---eEEEEecCC
Q 021357 194 PHEGPMCDLLWSDPDDRCG-WGISP-RG-AGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQ---KVVTIFSAP 267 (313)
Q Consensus 194 ~~~~~~~~llW~dp~~~~~-~~~~~-rg-~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~---~~iti~S~~ 267 (313)
.........+|..+.-... -..+. +. .-.....+.+.+.++..+++++|.||++.+.-.....++ +.+.+.+.
T Consensus 141 ~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw- 219 (241)
T PRK05340 141 FLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW- 219 (241)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC-
Confidence 0000000000000000000 00000 01 112234577888899999999999999987544333332 34444432
Q ss_pred CCCCCCCCcEEEEEEcCCCceEEEEe
Q 021357 268 NYCYRCGNMASILEVDDCRSHTFIQF 293 (313)
Q Consensus 268 ~~~~~~~n~~avl~i~~~~~~~~~~~ 293 (313)
...+.++.++++. .++..|
T Consensus 220 ------~~~~~~~~~~~~~-~~~~~~ 238 (241)
T PRK05340 220 ------HEQGSVLKVDADG-VELIPF 238 (241)
T ss_pred ------CCCCeEEEEECCc-eEEEeC
Confidence 1236788887754 555554
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.97 E-value=5.8e-09 Score=82.82 Aligned_cols=117 Identities=21% Similarity=0.307 Sum_probs=80.3
Q ss_pred eEecCCCCCHHHHHHHH--HHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCCh
Q 021357 57 TICGDIHGQFHDLAELF--QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (313)
Q Consensus 57 ~viGDiHG~~~~l~~lL--~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (313)
+++||+|+......... ......+.+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999887765 33444556778899999999887666544322222233346999999999
Q ss_pred HHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCC
Q 021357 135 DECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 214 (313)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~ 214 (313)
++++|+.+.+...... +.
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~--------- 87 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PD--------- 87 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------cc---------
Confidence 8999986643321000 00
Q ss_pred cCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021357 215 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (313)
Q Consensus 215 ~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~ 253 (313)
...........+...+.+++|.||++....+.
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00145677888888999999999999865543
No 44
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.96 E-value=3.1e-08 Score=87.63 Aligned_cols=192 Identities=17% Similarity=0.145 Sum_probs=102.1
Q ss_pred ceeEecCCCCCH----HHH----HHHHHHcCCCCCCceEEeeccccCCCCcH---HHHHHHHHhh-hhCCCcEEEEcCCc
Q 021357 55 PVTICGDIHGQF----HDL----AELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALK-VRYPQRITILRGNH 122 (313)
Q Consensus 55 ~i~viGDiHG~~----~~l----~~lL~~~~~~~~~~~vflGD~vDrG~~s~---e~l~~l~~l~-~~~p~~v~~lrGNH 122 (313)
+++++||+|-.. ..+ ..+++.+...+.+.+|++||+++.+.... .....+..+. ...| ++.++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEECCCC
Confidence 689999999522 233 33444444445677889999999987432 2333444443 1233 88999999
Q ss_pred hhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhhccccccCCCCCccccc
Q 021357 123 ESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDL 202 (313)
Q Consensus 123 E~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~l 202 (313)
|.... .... ....-...+.+.|+..|- ..-++++|-=+.+..
T Consensus 80 D~~~~-ld~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~------------------------ 121 (214)
T cd07399 80 DLVLA-LEFG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDD------------------------ 121 (214)
T ss_pred cchhh-CCCC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCC------------------------
Confidence 94321 1111 012223344445554331 124788886322110
Q ss_pred cccCCCCCCCCCcCCCCCccccCHHHHHHHHHhC-CceEEEeeccccccceEEe-----cCCeEEEEecCCCCCCCCCCc
Q 021357 203 LWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN-NLKLIARAHQLVMDGFNWA-----HEQKVVTIFSAPNYCYRCGNM 276 (313)
Q Consensus 203 lW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~-~~~~iVrGHt~~~~G~~~~-----~~~~~iti~S~~~~~~~~~n~ 276 (313)
-|.+. ...| .....+.+.+.+.++++ ++++++.||.+... .... .++.+..+.+........+|.
T Consensus 122 ~~~~~--~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~-~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~ 192 (214)
T cd07399 122 SRPDS--IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAG-RTTLVSVGDAGRTVHQMLADYQGEPNGGNG 192 (214)
T ss_pred CcCcc--cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCCc-eEEEcccCCCCCEeeEEeecccCCCCCCcc
Confidence 01100 0001 01113345677888887 79999999998643 2222 133344444332222222333
Q ss_pred E-EEEEEcCC-CceEEEEeec
Q 021357 277 A-SILEVDDC-RSHTFIQFEP 295 (313)
Q Consensus 277 ~-avl~i~~~-~~~~~~~~~~ 295 (313)
. .++++++. ..+.+.+|.|
T Consensus 193 ~~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 193 FLRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred eEEEEEEecCCCEEEEEeCCC
Confidence 2 67888765 5888888865
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.95 E-value=2.6e-09 Score=90.42 Aligned_cols=67 Identities=22% Similarity=0.148 Sum_probs=46.5
Q ss_pred eeEecCCCCCHHHHHHHH-HHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 56 VTICGDIHGQFHDLAELF-QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 56 i~viGDiHG~~~~l~~lL-~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
+.++||+|++...+...+ +.....+.+.++++||+++++....... ++...+ .+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~--~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALK--GFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhc--CCccEEEeCCCcceE
Confidence 478999999988776655 3333445677888999999887654443 222222 234599999999986
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.93 E-value=1.1e-08 Score=83.26 Aligned_cols=107 Identities=18% Similarity=0.100 Sum_probs=73.9
Q ss_pred eEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHH
Q 021357 57 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 136 (313)
Q Consensus 57 ~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e 136 (313)
.||||+||..+.+.++... ..+.+.++++||+. .+++..+.+++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998877776664 45678899999973 34556665542 123889999999
Q ss_pred HHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCCcC
Q 021357 137 CLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGIS 216 (313)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~ 216 (313)
-+++++|+-+ .... +..
T Consensus 57 ----------------------------~~Ilv~H~pp--~~~~-----------------------~~~---------- 73 (129)
T cd07403 57 ----------------------------VDILLTHAPP--AGIG-----------------------DGE---------- 73 (129)
T ss_pred ----------------------------cCEEEECCCC--CcCc-----------------------Ccc----------
Confidence 3789999732 1100 000
Q ss_pred CCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021357 217 PRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (313)
Q Consensus 217 ~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~ 253 (313)
.....+.+.+.++++..+.++++.||++.+..+.
T Consensus 74 ---~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 ---DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ---cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0011345678888888899999999999877655
No 47
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.93 E-value=4.6e-08 Score=83.45 Aligned_cols=162 Identities=17% Similarity=0.108 Sum_probs=100.9
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCC
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 133 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~ 133 (313)
|+|.|+||.||...+..+.++.....+.+.+|.+||++.... +..+.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~-----~~~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT-----LDALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc-----hHHhhc---ccccceEEEEccCCCcccc-----
Confidence 789999999999976666666666666788888999987644 122222 0124699999999964221
Q ss_pred hHHHHHHhCCchhHHHHHHHHhhCCc--EEEEc-CcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCC
Q 021357 134 YDECLRKYGNANIWKIFTDLFDYFPL--TALVE-SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR 210 (313)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~~~~~lP~--~~~i~-~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~ 210 (313)
..+|. ...++ .+++++||..-..
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~--------------------------------- 94 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFV--------------------------------- 94 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCcccc---------------------------------
Confidence 22332 23334 4899999943210
Q ss_pred CCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCCCCCCCCcEEEEEEcC-CCceE
Q 021357 211 CGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDD-CRSHT 289 (313)
Q Consensus 211 ~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n~~avl~i~~-~~~~~ 289 (313)
......++.+.+..+++++|.|||+.+.-.+. .+-.+++-.|.+.+- .++..+++.++. +.+++
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~-~~i~~vNPGS~s~pr--~~~~~sy~il~~~~~~~~ 159 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPVAEKV-GGILLVNPGSVSGPR--GGNPASYAILDVDNLEVE 159 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcccEEEE-CCEEEEcCCCcCCCC--CCCCcEEEEEEcCCCEEE
Confidence 01234566677778899999999998643332 223355556655542 234445555553 46677
Q ss_pred EEEeecCC
Q 021357 290 FIQFEPAP 297 (313)
Q Consensus 290 ~~~~~~~~ 297 (313)
...++...
T Consensus 160 ~~~~~~~~ 167 (172)
T COG0622 160 VLFLERDR 167 (172)
T ss_pred EEEeeccc
Confidence 77665543
No 48
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.91 E-value=2.9e-08 Score=81.80 Aligned_cols=117 Identities=21% Similarity=0.190 Sum_probs=75.7
Q ss_pred eeEecCCCCCHH----------HHHHHHHHcCCCCCCceEEeeccccCCCCc--HHHHHHHHHhhhhCCCcEEEEcCCch
Q 021357 56 VTICGDIHGQFH----------DLAELFQIGGKCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITILRGNHE 123 (313)
Q Consensus 56 i~viGDiHG~~~----------~l~~lL~~~~~~~~~~~vflGD~vDrG~~s--~e~l~~l~~l~~~~p~~v~~lrGNHE 123 (313)
|+.++|+|=... .|.++++.+...+.+.++++||+++.+... .+...++..+.... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 578899994222 122345555555678888999999988642 22344455554321 25999999999
Q ss_pred hhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhhccccccCCCCCcccccc
Q 021357 124 SRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL 203 (313)
Q Consensus 124 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~ll 203 (313)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 6 88999754322100
Q ss_pred ccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceE
Q 021357 204 WSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (313)
Q Consensus 204 W~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~ 253 (313)
|. .. . .+.+.+.+++++.+++++++||++.+..+.
T Consensus 95 ~~---------~~-----~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 GR---------ER-----L-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred cc---------cc-----C-CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 00 00 0 156778899999999999999999876544
No 49
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.86 E-value=8.6e-08 Score=83.93 Aligned_cols=192 Identities=19% Similarity=0.217 Sum_probs=112.0
Q ss_pred CCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccc--cCCCCcHHHHHH--HHHhhhhCCCcEEEEcCCchhhhhH
Q 021357 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV--DRGYYSVETVTL--LVALKVRYPQRITILRGNHESRQIT 128 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~v--DrG~~s~e~l~~--l~~l~~~~p~~v~~lrGNHE~~~~~ 128 (313)
.+|+.+++|+||..+.+.+++..++....+.+++.||+. +.|+.- .+... +..++.. .-.++.++||.|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~-~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKE-VAEELNKLEALKEL-GIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchH-HHHhhhHHHHHHhc-CCeEEEEcCCCChHHHH
Confidence 578999999999999999999998877788899999999 888742 22222 3444422 23599999999976553
Q ss_pred hhhCCh----HH----------------------HHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchh
Q 021357 129 QVYGFY----DE----------------------CLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLD 182 (313)
Q Consensus 129 ~~~~~~----~e----------------------~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~ 182 (313)
....-. .. ....|..+.++......+...- -..+++..|+ ||.- ..
T Consensus 81 ~~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~----~~~~Il~~Ha--PP~g-t~- 152 (226)
T COG2129 81 DVLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD----NPVNILLTHA--PPYG-TL- 152 (226)
T ss_pred HHHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc----CcceEEEecC--CCCC-cc-
Confidence 311000 00 0000001111111111111110 0011666665 2211 10
Q ss_pred hhhhccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEE
Q 021357 183 NIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVT 262 (313)
Q Consensus 183 ~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~it 262 (313)
.| .+.| -.--|.++++++.+..+-.+.++||-+...|+...-+.
T Consensus 153 -----------------~d--------------~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~T---- 196 (226)
T COG2129 153 -----------------LD--------------TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGNT---- 196 (226)
T ss_pred -----------------cc--------------CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCCe----
Confidence 00 1111 02357899999999999999999999998898764332
Q ss_pred EecCCCCCCCCCCcEEEEEEcCCCceEEEEe
Q 021357 263 IFSAPNYCYRCGNMASILEVDDCRSHTFIQF 293 (313)
Q Consensus 263 i~S~~~~~~~~~n~~avl~i~~~~~~~~~~~ 293 (313)
|.-.|+. -+..+.|++++++. .++..+|
T Consensus 197 ivVNPG~--~~~g~yA~i~l~~~-~Vk~~~~ 224 (226)
T COG2129 197 IVVNPGP--LGEGRYALIELEKE-VVKLEQF 224 (226)
T ss_pred EEECCCC--ccCceEEEEEecCc-EEEEEEe
Confidence 2322332 12456789988765 5555554
No 50
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.85 E-value=2.4e-08 Score=91.50 Aligned_cols=71 Identities=20% Similarity=0.187 Sum_probs=54.0
Q ss_pred CCceeEecCCCCC----HHHHHHHHHHcCCCCCCceEEeeccccCC--CCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 53 KSPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRG--YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 53 ~~~i~viGDiHG~----~~~l~~lL~~~~~~~~~~~vflGD~vDrG--~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
..||++++|+|.. ...+.++++.+...+.|.++++||++|++ ....+....+..++...| ++.+.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 4789999999986 55677788776666677888999999954 233446667777765544 99999999964
No 51
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.80 E-value=1.4e-08 Score=91.34 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=48.8
Q ss_pred ceeEecCCCCCH------HHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 55 PVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 55 ~i~viGDiHG~~------~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
||.+++|+|.++ ..+.++++.+...+.+.+|++||++++.+.+.+.+..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 589999999763 23566777665556778889999999876555555544442 223499999999964
No 52
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.78 E-value=3.7e-08 Score=87.09 Aligned_cols=70 Identities=21% Similarity=0.198 Sum_probs=53.7
Q ss_pred CceeEecCCCCCHH----HHHHHHHHcCCCCCCceEEeeccccCCCCcH-HHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 54 SPVTICGDIHGQFH----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~~~----~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~-e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
+||++++|+|.... .+.++++.+.....+.++++||++|.+.... ....++..+.... .++++.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~--~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPL--GVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCC--CEEEECCCcccc
Confidence 68999999998754 6777777766556678889999999887664 5666666554333 499999999975
No 53
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.76 E-value=2.2e-08 Score=89.60 Aligned_cols=68 Identities=9% Similarity=0.105 Sum_probs=43.9
Q ss_pred eeEecCCCCCH------HHHHHHHHHcCCCCCCceEEeeccccCC-----CC--cHHHHHHHHHhhhhCCCcEEEEcCCc
Q 021357 56 VTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRG-----YY--SVETVTLLVALKVRYPQRITILRGNH 122 (313)
Q Consensus 56 i~viGDiHG~~------~~l~~lL~~~~~~~~~~~vflGD~vDrG-----~~--s~e~l~~l~~l~~~~p~~v~~lrGNH 122 (313)
+++|||+|... ..+.+.|..... +.+.++++||++|.. +. ..++.+++..++.. +..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999643 234444443322 467788999999952 11 13456666666543 34599999999
Q ss_pred hhh
Q 021357 123 ESR 125 (313)
Q Consensus 123 E~~ 125 (313)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 974
No 54
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.75 E-value=8.4e-07 Score=80.66 Aligned_cols=72 Identities=17% Similarity=0.022 Sum_probs=44.6
Q ss_pred CceeEecCCCCCH----------------HHHHHHHHHcCCC--CCCceEEeeccccCCCCcH---HHHHHHHH-hhhh-
Q 021357 54 SPVTICGDIHGQF----------------HDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV---ETVTLLVA-LKVR- 110 (313)
Q Consensus 54 ~~i~viGDiHG~~----------------~~l~~lL~~~~~~--~~~~~vflGD~vDrG~~s~---e~l~~l~~-l~~~- 110 (313)
-+++++||+|-.. ..++++++.+... ..+.++++||+++.|.... +....+.+ ++..
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 3678899999764 1345666665432 4567888999999886531 11222222 2221
Q ss_pred CCCcEEEEcCCchhh
Q 021357 111 YPQRITILRGNHESR 125 (313)
Q Consensus 111 ~p~~v~~lrGNHE~~ 125 (313)
.+-.++.++||||..
T Consensus 85 ~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 PDIPLVCVCGNHDVG 99 (262)
T ss_pred CCCcEEEeCCCCCCC
Confidence 123499999999974
No 55
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.66 E-value=4.5e-07 Score=79.08 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=43.8
Q ss_pred CceeEecCCCCCHH------------HHHHHHHHcCCCCCCceEEeeccccCCCCc---HHHHHHHHHhhhhCCCcEEEE
Q 021357 54 SPVTICGDIHGQFH------------DLAELFQIGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYPQRITIL 118 (313)
Q Consensus 54 ~~i~viGDiHG~~~------------~l~~lL~~~~~~~~~~~vflGD~vDrG~~s---~e~l~~l~~l~~~~p~~v~~l 118 (313)
.++++++|+|-... .+..+.+.+...+.+.+|++||+++.+... .+.+..+.+......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57999999996332 122222233334567789999999976653 445544444333222348999
Q ss_pred cCCch
Q 021357 119 RGNHE 123 (313)
Q Consensus 119 rGNHE 123 (313)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 56
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.66 E-value=4.4e-07 Score=90.16 Aligned_cols=73 Identities=22% Similarity=0.337 Sum_probs=45.7
Q ss_pred cCCceeEecCCC-CCH----HHHHHHHHHcC---------CCCCCceEEeeccccC-CCCc---------------HHHH
Q 021357 52 VKSPVTICGDIH-GQF----HDLAELFQIGG---------KCPDTNYLFMGDYVDR-GYYS---------------VETV 101 (313)
Q Consensus 52 ~~~~i~viGDiH-G~~----~~l~~lL~~~~---------~~~~~~~vflGD~vDr-G~~s---------------~e~l 101 (313)
...++++|+|+| |.. ..+..+++.+. ....+.+|++||++|. |..+ .++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 356799999999 653 23444444332 2234678899999994 3211 1344
Q ss_pred HHHHHhhhhCCCcEEEEcCCchhhh
Q 021357 102 TLLVALKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (313)
.+|.++.... .+++++||||...
T Consensus 322 ~~L~~L~~~i--~V~~ipGNHD~~~ 344 (504)
T PRK04036 322 EYLKQIPEDI--KIIISPGNHDAVR 344 (504)
T ss_pred HHHHhhhcCC--eEEEecCCCcchh
Confidence 5555554332 4999999999764
No 57
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.65 E-value=4e-07 Score=81.37 Aligned_cols=67 Identities=28% Similarity=0.340 Sum_probs=46.7
Q ss_pred ceeEecCCCCC------------HHHHHHHHHHcCCC--CCCceEEeeccccCCCC-c-HHHHHHHHHhhhhCCCcEEEE
Q 021357 55 PVTICGDIHGQ------------FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYY-S-VETVTLLVALKVRYPQRITIL 118 (313)
Q Consensus 55 ~i~viGDiHG~------------~~~l~~lL~~~~~~--~~~~~vflGD~vDrG~~-s-~e~l~~l~~l~~~~p~~v~~l 118 (313)
|++++||+|=. ...+.++++.+... +.+.+|++||+++.|.. . ..++..+.++ +-.++++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 68999999954 34677788776554 56778899999998752 1 1233333333 3348999
Q ss_pred cCCchhh
Q 021357 119 RGNHESR 125 (313)
Q Consensus 119 rGNHE~~ 125 (313)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 58
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.59 E-value=1.5e-06 Score=86.02 Aligned_cols=72 Identities=14% Similarity=0.194 Sum_probs=52.1
Q ss_pred CHHHHHHHHHhCCce----EEEeeccccc--cceE-EecCCeEEEEecCCCCCCCCCC---cEEEEEEcCCCceEEEEee
Q 021357 225 GQDISEQFNHTNNLK----LIARAHQLVM--DGFN-WAHEQKVVTIFSAPNYCYRCGN---MASILEVDDCRSHTFIQFE 294 (313)
Q Consensus 225 g~~~~~~~l~~~~~~----~iVrGHt~~~--~G~~-~~~~~~~iti~S~~~~~~~~~n---~~avl~i~~~~~~~~~~~~ 294 (313)
.++..+..|+.+|++ .||.||+||. +|-. +-.+|+++.|+.+ +|..+.. -|++-.|...-...+.+.+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGG--fskAYqk~TGIAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGG--FSKAYQKTTGIAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcCh--hhhhhccccCccceEEEecCCcceeccCC
Confidence 456788899999998 9999999986 4532 3348999999964 3333332 3577778777777777777
Q ss_pred cCCC
Q 021357 295 PAPR 298 (313)
Q Consensus 295 ~~~~ 298 (313)
|...
T Consensus 585 pF~s 588 (640)
T PF06874_consen 585 PFES 588 (640)
T ss_pred CCCC
Confidence 7653
No 59
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.58 E-value=5e-06 Score=76.29 Aligned_cols=72 Identities=13% Similarity=0.081 Sum_probs=48.0
Q ss_pred cCCceeEecCCC-C-----------CHHHHHHHHHHcCC--CCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEE
Q 021357 52 VKSPVTICGDIH-G-----------QFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 117 (313)
Q Consensus 52 ~~~~i~viGDiH-G-----------~~~~l~~lL~~~~~--~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~ 117 (313)
..++++.|+|+| . ....|.++++.+.. .+.+.+|+.||+++.|. .+-+..+.+...+.+..+++
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~ 90 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVW 90 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEE
Confidence 357899999999 1 14567788876643 23567888999999874 23333333322233345999
Q ss_pred EcCCchhh
Q 021357 118 LRGNHESR 125 (313)
Q Consensus 118 lrGNHE~~ 125 (313)
++||||..
T Consensus 91 v~GNHD~~ 98 (275)
T PRK11148 91 LPGNHDFQ 98 (275)
T ss_pred eCCCCCCh
Confidence 99999973
No 60
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.54 E-value=2.7e-06 Score=77.78 Aligned_cols=72 Identities=19% Similarity=0.235 Sum_probs=49.7
Q ss_pred ceeEecCCC--C-----------CHHHHHHHHHHcCCCCCCceEEeeccccCCCC-cHHHHHHHHHhhhhCCCcEEEEcC
Q 021357 55 PVTICGDIH--G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRG 120 (313)
Q Consensus 55 ~i~viGDiH--G-----------~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~-s~e~l~~l~~l~~~~p~~v~~lrG 120 (313)
|+++|||+| . ....+.++++.+...+.+.+|++||+++.|.. +.+-+..+.+.....+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24567777877765557788899999998863 233444333333332234999999
Q ss_pred Cchhhh
Q 021357 121 NHESRQ 126 (313)
Q Consensus 121 NHE~~~ 126 (313)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999753
No 61
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.52 E-value=2.8e-07 Score=75.08 Aligned_cols=142 Identities=46% Similarity=0.779 Sum_probs=108.6
Q ss_pred HhhhCChHHHHHHhCCchhHHH---HHHHHhhCCcEEEEcC-cEEEecCCCCCCc-cchhhhhhccccc--cCCCCCccc
Q 021357 128 TQVYGFYDECLRKYGNANIWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPMC 200 (313)
Q Consensus 128 ~~~~~~~~e~~~~~~~~~~~~~---~~~~~~~lP~~~~i~~-~~~~vHgGi~p~~-~~~~~i~~~~r~~--~~~~~~~~~ 200 (313)
...+++..++...+.....|.. ..++|+.+|+.+..++ .++|.|++++|.. ...++++...+.. .....+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 3445555565555543323444 8999999999988877 8999999999875 5677777777665 666667777
Q ss_pred cccccCCCC--CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCCCCC
Q 021357 201 DLLWSDPDD--RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYC 270 (313)
Q Consensus 201 ~llW~dp~~--~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~~ 270 (313)
+.+|.++.. ...|.++++|....+ .+....|+.....+.+.++|.....++.....+..+|.++++++|
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 779998875 688999999888766 567777887777777999999998888777765789999998875
No 62
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.41 E-value=1.9e-06 Score=77.22 Aligned_cols=67 Identities=19% Similarity=0.218 Sum_probs=40.2
Q ss_pred eeEecCCCCCH--------------HHHHHHHHHcC--CCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEc
Q 021357 56 VTICGDIHGQF--------------HDLAELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILR 119 (313)
Q Consensus 56 i~viGDiHG~~--------------~~l~~lL~~~~--~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lr 119 (313)
|++++|||-.. +-+.++.+.+. .++.|.+|+.||++++++.. +....+..++.. |..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~l-~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDAL-PGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHhC-CCCeEEEe
Confidence 58999999661 22233333322 13567788899999877532 332333333322 23489999
Q ss_pred CCchh
Q 021357 120 GNHES 124 (313)
Q Consensus 120 GNHE~ 124 (313)
||||.
T Consensus 79 GNHD~ 83 (232)
T cd07393 79 GNHDY 83 (232)
T ss_pred CCccc
Confidence 99997
No 63
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.33 E-value=4e-07 Score=80.11 Aligned_cols=29 Identities=3% Similarity=-0.038 Sum_probs=22.5
Q ss_pred CHHHHHHHHHhCCceEEEeeccccccceE
Q 021357 225 GQDISEQFNHTNNLKLIARAHQLVMDGFN 253 (313)
Q Consensus 225 g~~~~~~~l~~~~~~~iVrGHt~~~~G~~ 253 (313)
....+.+.++..+++.+|.||++.+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 34566777888999999999999875443
No 64
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.19 E-value=1.3e-05 Score=67.33 Aligned_cols=48 Identities=21% Similarity=0.272 Sum_probs=29.7
Q ss_pred CCCCCceEEeeccccCCCCc-HHHH-HHHHHhhhh---C-CCcEEEEcCCchhh
Q 021357 78 KCPDTNYLFMGDYVDRGYYS-VETV-TLLVALKVR---Y-PQRITILRGNHESR 125 (313)
Q Consensus 78 ~~~~~~~vflGD~vDrG~~s-~e~l-~~l~~l~~~---~-p~~v~~lrGNHE~~ 125 (313)
..+.+.+|++||+++.+... .+.. ..+..++.. . +-.++++.||||..
T Consensus 36 ~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 36 LLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred hcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34567899999999987642 2222 222333222 1 23599999999974
No 65
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.16 E-value=8.4e-06 Score=72.22 Aligned_cols=199 Identities=16% Similarity=0.147 Sum_probs=102.7
Q ss_pred eEecCCCCC------HHHHHHHHHHcCCCCCCceEEeeccccC--CCC-----cHHHHHHHHHhhhhCCCcEEEEcCCch
Q 021357 57 TICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDR--GYY-----SVETVTLLVALKVRYPQRITILRGNHE 123 (313)
Q Consensus 57 ~viGDiHG~------~~~l~~lL~~~~~~~~~~~vflGD~vDr--G~~-----s~e~l~~l~~l~~~~p~~v~~lrGNHE 123 (313)
++|||+|=. .+.|...|+...- ..+.++++||++|- |.+ -.++...|..+..+ +.+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~-G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAA-QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARK-GTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccc-cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhc-CCeEEEecCchH
Confidence 478999965 2345555655433 45788999999862 322 23455555555433 457999999999
Q ss_pred hhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcE---EEEcCcEEEecCCCCCCccchhhhhhccccccC-------
Q 021357 124 SRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLT---ALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV------- 193 (313)
Q Consensus 124 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~---~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~------- 193 (313)
... ...+ ....|. +.-+|-. ...+++++++||..--.. ...-.........
T Consensus 79 fll-~~~f------~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~--~~~y~~~r~~~~~~~~~~lf 139 (237)
T COG2908 79 FLL-GKRF------AQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTD--DRAYQWFRYKVHWAWLQLLF 139 (237)
T ss_pred HHH-HHHH------HhhcCc----------eEEcCcceeeeecCcEEEEEeCCcccch--HHHHHHHHHHcccHHHHHHH
Confidence 442 2111 111111 1122222 223678999999652111 1111100000000
Q ss_pred ---CCC--CccccccccCCCCCCCCCcCCCCCc---cccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEec
Q 021357 194 ---PHE--GPMCDLLWSDPDDRCGWGISPRGAG---YTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFS 265 (313)
Q Consensus 194 ---~~~--~~~~~llW~dp~~~~~~~~~~rg~~---~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S 265 (313)
|.. ..+..-+|+.. .|........ ....++.+.+-+++.+++.+|+||++.+..-.... ...|...+
T Consensus 140 lnl~l~~R~ri~~k~r~~s----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~-~~yi~lGd 214 (237)
T COG2908 140 LNLPLRVRRRIAYKIRSLS----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPG-ITYINLGD 214 (237)
T ss_pred HHhHHHHHHHHHHHHHHhh----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCC-ceEEecCc
Confidence 000 00011133322 2222211111 13456778888999999999999999876654432 22333332
Q ss_pred CCCCCCCCCCcEEEEEEcCCCce
Q 021357 266 APNYCYRCGNMASILEVDDCRSH 288 (313)
Q Consensus 266 ~~~~~~~~~n~~avl~i~~~~~~ 288 (313)
- ...+++++++++...
T Consensus 215 W-------~~~~s~~~v~~~~~~ 230 (237)
T COG2908 215 W-------VSEGSILEVDDGGLE 230 (237)
T ss_pred c-------hhcceEEEEecCcEE
Confidence 2 245789998877643
No 66
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.15 E-value=4.7e-06 Score=75.70 Aligned_cols=72 Identities=22% Similarity=0.244 Sum_probs=50.1
Q ss_pred CceeEecCCCCC------------HHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHH----HHHHHHhhhhCCCcEEE
Q 021357 54 SPVTICGDIHGQ------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYPQRITI 117 (313)
Q Consensus 54 ~~i~viGDiHG~------------~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~----l~~l~~l~~~~p~~v~~ 117 (313)
||++.++|+|-. ...|.++++.+.....+.+++.||++|+...+.+. .+++..++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 689999999942 23456666655555677899999999987655443 34455555433235999
Q ss_pred EcCCchhh
Q 021357 118 LRGNHESR 125 (313)
Q Consensus 118 lrGNHE~~ 125 (313)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 67
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.12 E-value=0.00029 Score=64.26 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=52.7
Q ss_pred CceeEecCCCCC------HHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhh--hCCCcEEEEcCCchhh
Q 021357 54 SPVTICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~------~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~--~~p~~v~~lrGNHE~~ 125 (313)
++|+.|+|+|-. .+.+.++++.+...+.|.+|+.||+.+.|. .+-.+.+.++-. ..|..++.++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 478999999987 335667777777666788999999999964 233333333222 4456699999999987
Q ss_pred hhHh
Q 021357 126 QITQ 129 (313)
Q Consensus 126 ~~~~ 129 (313)
..+.
T Consensus 79 ~~~~ 82 (301)
T COG1409 79 VVNG 82 (301)
T ss_pred chHH
Confidence 6543
No 68
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.07 E-value=2.9e-05 Score=70.64 Aligned_cols=70 Identities=21% Similarity=0.082 Sum_probs=42.7
Q ss_pred eeEecCCCCCHH------HH-HHHHHHcCCCCCCceEEeeccccCCCCc-------HHHH-HHHHHhh---hhCCCcEEE
Q 021357 56 VTICGDIHGQFH------DL-AELFQIGGKCPDTNYLFMGDYVDRGYYS-------VETV-TLLVALK---VRYPQRITI 117 (313)
Q Consensus 56 i~viGDiHG~~~------~l-~~lL~~~~~~~~~~~vflGD~vDrG~~s-------~e~l-~~l~~l~---~~~p~~v~~ 117 (313)
++.++|+|-... .. ..+++.+...+.+.+|++||++|+.... .+.. .++..++ ...+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 578999996322 12 3355555555677888999999976521 1111 2222222 222346899
Q ss_pred EcCCchhh
Q 021357 118 LRGNHESR 125 (313)
Q Consensus 118 lrGNHE~~ 125 (313)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999985
No 69
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.01 E-value=1.1e-05 Score=76.46 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=49.2
Q ss_pred CceeEecCCC-C-----------CHHHHHHHHHHcCCCCCCceEEeeccccCC-CCcHHHHHHHHH----hhhhCCCcEE
Q 021357 54 SPVTICGDIH-G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVA----LKVRYPQRIT 116 (313)
Q Consensus 54 ~~i~viGDiH-G-----------~~~~l~~lL~~~~~~~~~~~vflGD~vDrG-~~s~e~l~~l~~----l~~~~p~~v~ 116 (313)
||++.+||+| | ....|.++++.+...+.+.++++||++|+. +.+.+++.++.. .....+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999999 3 124556666666566678899999999985 445555444433 1122234599
Q ss_pred EEcCCchhh
Q 021357 117 ILRGNHESR 125 (313)
Q Consensus 117 ~lrGNHE~~ 125 (313)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 70
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.93 E-value=1.8e-05 Score=72.88 Aligned_cols=70 Identities=20% Similarity=0.213 Sum_probs=43.0
Q ss_pred CCceeEecCCCCC----HHHHHHHHHHcCCCCCCceEEeeccccCCCCc-----HHHHHHHHHhhhhCCCcEEEEcCCch
Q 021357 53 KSPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHE 123 (313)
Q Consensus 53 ~~~i~viGDiHG~----~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s-----~e~l~~l~~l~~~~p~~v~~lrGNHE 123 (313)
..+++|+||.|.. ...+.++.+. ..+.+-+|++||+++.+... -..+..+..+....| ++.++||||
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD 79 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHE 79 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCcccc
Confidence 4579999999963 2333333332 24456688899999544321 223333444434455 899999999
Q ss_pred hhh
Q 021357 124 SRQ 126 (313)
Q Consensus 124 ~~~ 126 (313)
...
T Consensus 80 ~~~ 82 (294)
T cd00839 80 ADY 82 (294)
T ss_pred ccc
Confidence 753
No 71
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.91 E-value=3.1e-05 Score=65.99 Aligned_cols=57 Identities=16% Similarity=0.177 Sum_probs=34.2
Q ss_pred HHHHHHHcCCCCCCceEEeeccccCCCCcH-HHHHH--HHHhhhhCCCcEEEEcCCchhhh
Q 021357 69 LAELFQIGGKCPDTNYLFMGDYVDRGYYSV-ETVTL--LVALKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 69 l~~lL~~~~~~~~~~~vflGD~vDrG~~s~-e~l~~--l~~l~~~~p~~v~~lrGNHE~~~ 126 (313)
+.++++.+...+.+.+|++||+++...... +.... +..+. ..+-.+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLL-AKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhc-cCCCeEEEEcccCccch
Confidence 444555555556788999999998654322 22221 12221 22346999999999753
No 72
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.89 E-value=2.3e-05 Score=68.90 Aligned_cols=72 Identities=25% Similarity=0.263 Sum_probs=48.5
Q ss_pred ceeEecCCC-CCH--------------HHHHHHHHHcCCCCCCceEEeeccccCCCCcHHH----HHHHHHhhhhCCCcE
Q 021357 55 PVTICGDIH-GQF--------------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYPQRI 115 (313)
Q Consensus 55 ~i~viGDiH-G~~--------------~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~----l~~l~~l~~~~p~~v 115 (313)
||+.++|+| |.. ..|.++++.+...+.+.+|++||+++....+.+. ...+.+++. .+..+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 689999999 321 2466677766556677888999999987655443 333333321 12359
Q ss_pred EEEcCCchhhhh
Q 021357 116 TILRGNHESRQI 127 (313)
Q Consensus 116 ~~lrGNHE~~~~ 127 (313)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999997643
No 73
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.80 E-value=5.6e-05 Score=73.04 Aligned_cols=55 Identities=16% Similarity=0.176 Sum_probs=43.9
Q ss_pred cCCceeEecCCCCC------------HHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHH
Q 021357 52 VKSPVTICGDIHGQ------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA 106 (313)
Q Consensus 52 ~~~~i~viGDiHG~------------~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~ 106 (313)
..+||++++|+|-. +.+|.++++.+.....|-+|+.||++|+..-|.+++..+++
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 45799999999953 45778888888777778888999999999888877655444
No 74
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.78 E-value=0.00024 Score=62.59 Aligned_cols=73 Identities=16% Similarity=0.253 Sum_probs=43.5
Q ss_pred CCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHH-------------------------H-HHHHH
Q 021357 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVET-------------------------V-TLLVA 106 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~-------------------------l-~~l~~ 106 (313)
..+|.+++|.||+++.+.++.+.+.....|.++|+||++-....+.+- + .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 457999999999999999999888777788899999998543333222 2 23333
Q ss_pred hhhhCCCcEEEEcCCchhhh
Q 021357 107 LKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 107 l~~~~p~~v~~lrGNHE~~~ 126 (313)
|. ..+--+++|+||||...
T Consensus 85 L~-~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LG-ELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HH-CC-SEEEEE--TTS-SH
T ss_pred HH-hcCCcEEEecCCCCchH
Confidence 33 23335999999999753
No 75
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.74 E-value=4.7e-05 Score=64.70 Aligned_cols=66 Identities=26% Similarity=0.392 Sum_probs=44.2
Q ss_pred eeEecCCCCCHHHH---------------HHHHHHcC--CCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEE
Q 021357 56 VTICGDIHGQFHDL---------------AELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (313)
Q Consensus 56 i~viGDiHG~~~~l---------------~~lL~~~~--~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~l 118 (313)
+++|+|+|=..... ..+++.+. ..+.+.+|++||+++++..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 37899999766532 22344332 2346789999999999886543 4444443 2359999
Q ss_pred cCCchhhh
Q 021357 119 RGNHESRQ 126 (313)
Q Consensus 119 rGNHE~~~ 126 (313)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999754
No 76
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.71 E-value=9.4e-05 Score=67.49 Aligned_cols=70 Identities=16% Similarity=0.248 Sum_probs=44.4
Q ss_pred eeEecCCCCCHHHHHHHHHHc---CCCCCCceEEeeccccCCCC-cHHHH----------HHHHHh--hhhCCCcEEEEc
Q 021357 56 VTICGDIHGQFHDLAELFQIG---GKCPDTNYLFMGDYVDRGYY-SVETV----------TLLVAL--KVRYPQRITILR 119 (313)
Q Consensus 56 i~viGDiHG~~~~l~~lL~~~---~~~~~~~~vflGD~vDrG~~-s~e~l----------~~l~~l--~~~~p~~v~~lr 119 (313)
|+|+||+||+++.+.+.++.. ...+.+.+|++||+-..+.. ..+.+ ++..-+ ....|--+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999887655433 23457778899999654432 22222 121111 122454479999
Q ss_pred CCchhh
Q 021357 120 GNHESR 125 (313)
Q Consensus 120 GNHE~~ 125 (313)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 77
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.69 E-value=0.00011 Score=65.61 Aligned_cols=69 Identities=17% Similarity=0.220 Sum_probs=44.0
Q ss_pred CceeEecCCC-CCHHHH----------------HHHHHHcCCCCCCceEEeeccccCCCCc---HHHHHHHHHhhhhCCC
Q 021357 54 SPVTICGDIH-GQFHDL----------------AELFQIGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYPQ 113 (313)
Q Consensus 54 ~~i~viGDiH-G~~~~l----------------~~lL~~~~~~~~~~~vflGD~vDrG~~s---~e~l~~l~~l~~~~p~ 113 (313)
.+..+|+|+| |.-..+ .++.+.+...+.+.+|++||+.+..... .++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6789999999 533322 2233333444567899999999755432 23334444432 3
Q ss_pred cEEEEcCCchhhh
Q 021357 114 RITILRGNHESRQ 126 (313)
Q Consensus 114 ~v~~lrGNHE~~~ 126 (313)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 6999999999653
No 78
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.65 E-value=0.00074 Score=61.46 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=25.7
Q ss_pred cCHHHHHHHHHhCCceEEEeeccccccceEEec
Q 021357 224 FGQDISEQFNHTNNLKLIARAHQLVMDGFNWAH 256 (313)
Q Consensus 224 fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~ 256 (313)
-.++..++.|+..+-.+|+.||++ +++++.+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 367889999999999999999998 5565544
No 79
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.61 E-value=9.5e-05 Score=71.67 Aligned_cols=71 Identities=21% Similarity=0.224 Sum_probs=47.6
Q ss_pred CceeEecCCCCCH--------HH----HHHHHHHcCCCCCCceEEeeccccCCCCcHHH----HHHHHHhhhhCCCcEEE
Q 021357 54 SPVTICGDIHGQF--------HD----LAELFQIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYPQRITI 117 (313)
Q Consensus 54 ~~i~viGDiHG~~--------~~----l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~----l~~l~~l~~~~p~~v~~ 117 (313)
||++.++|+|-.. ++ |..+++.+.....+.+|++||++|++..+... ..++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 6899999999421 11 34455555556678899999999998654432 2344455432 235999
Q ss_pred EcCCchhh
Q 021357 118 LRGNHESR 125 (313)
Q Consensus 118 lrGNHE~~ 125 (313)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999975
No 80
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.56 E-value=0.00069 Score=56.61 Aligned_cols=119 Identities=18% Similarity=0.232 Sum_probs=77.7
Q ss_pred eEecCCCCCHHHHHHHHHHcC--CCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCCh
Q 021357 57 TICGDIHGQFHDLAELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (313)
Q Consensus 57 ~viGDiHG~~~~l~~lL~~~~--~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~ 134 (313)
.|+||+||+++.+.+-++.+. ..+-+.++++||+..-...+-+ +.-...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999877666532 2455778899999876555433 33333334455666899999998
Q ss_pred HHHHHHhCCchhHHHHHHHHhhCCcEEEEcCcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCCCCCCC
Q 021357 135 DECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 214 (313)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~ 214 (313)
.-+++++|.= |. .+.+.. +. ..
T Consensus 69 -----------------------------~~DILlTh~w--P~--gi~~~~---------------~~-~~--------- 90 (150)
T cd07380 69 -----------------------------GVDILLTSEW--PK--GISKLS---------------KV-PF--------- 90 (150)
T ss_pred -----------------------------CCCEEECCCC--ch--hhhhhC---------------CC-cc---------
Confidence 4479999961 11 111000 00 00
Q ss_pred cCCCCCccccCHHHHHHHHHhCCceEEEeecccc
Q 021357 215 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 248 (313)
Q Consensus 215 ~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~ 248 (313)
...+..-|...+.++++...-++.++||..+
T Consensus 91 ---~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 91 ---EETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ---cccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 0112235678899999999999999999864
No 81
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.53 E-value=0.00017 Score=66.61 Aligned_cols=72 Identities=19% Similarity=0.158 Sum_probs=52.4
Q ss_pred CCceeEecCCCCCHHH--HHHHHHHcCCCCCCceEEeeccccC--CCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhh
Q 021357 53 KSPVTICGDIHGQFHD--LAELFQIGGKCPDTNYLFMGDYVDR--GYYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~--l~~lL~~~~~~~~~~~vflGD~vDr--G~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (313)
..+|+.++|+|-.... ..+.+........|-+++.||++|+ -+....+...+..|+..+| ++++.||||...
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g--v~av~GNHd~~~ 119 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG--VFAVLGNHDYGV 119 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC--EEEEeccccccc
Confidence 4579999999987765 2333444433334778889999995 4455667888888887665 999999998753
No 82
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.50 E-value=0.0013 Score=57.14 Aligned_cols=48 Identities=19% Similarity=0.313 Sum_probs=34.2
Q ss_pred CCCCCceEEeeccccCCCCc--HHHHHHHHHhhhhCC----CcEEEEcCCchhh
Q 021357 78 KCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYP----QRITILRGNHESR 125 (313)
Q Consensus 78 ~~~~~~~vflGD~vDrG~~s--~e~l~~l~~l~~~~p----~~v~~lrGNHE~~ 125 (313)
..+.+.++||||++|.|+.+ .+..+.+.+++.-++ ..+++|.||||.-
T Consensus 40 ~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 40 FVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred ccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 34567899999999999854 336666666654322 2589999999954
No 83
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.45 E-value=0.00019 Score=64.59 Aligned_cols=67 Identities=19% Similarity=0.250 Sum_probs=39.5
Q ss_pred eEecCCC--CCH---HHHHHHHHHcCCC-----CCCceEEeeccccCCCC------------c----HHHHHHHHHhhhh
Q 021357 57 TICGDIH--GQF---HDLAELFQIGGKC-----PDTNYLFMGDYVDRGYY------------S----VETVTLLVALKVR 110 (313)
Q Consensus 57 ~viGDiH--G~~---~~l~~lL~~~~~~-----~~~~~vflGD~vDrG~~------------s----~e~l~~l~~l~~~ 110 (313)
++|||+| +.. ..+..+++.+... ..+.+|++||++|+... . ..+..++.++...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6899999 331 2233444433222 23778899999997310 0 1233444444432
Q ss_pred CCCcEEEEcCCchhh
Q 021357 111 YPQRITILRGNHESR 125 (313)
Q Consensus 111 ~p~~v~~lrGNHE~~ 125 (313)
-.|+++.||||..
T Consensus 82 --~~v~~ipGNHD~~ 94 (243)
T cd07386 82 --IKIIIIPGNHDAV 94 (243)
T ss_pred --CeEEEeCCCCCcc
Confidence 3599999999975
No 84
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.15 E-value=0.0011 Score=63.88 Aligned_cols=73 Identities=21% Similarity=0.239 Sum_probs=52.7
Q ss_pred CceeEecCCCCC-------------HHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHh-hhhC--CCcEEE
Q 021357 54 SPVTICGDIHGQ-------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVAL-KVRY--PQRITI 117 (313)
Q Consensus 54 ~~i~viGDiHG~-------------~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l-~~~~--p~~v~~ 117 (313)
||+..++|+|=. +.+|..+++.+.....|-+|+.||++|+..-|.+++.++.+. +... .-.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 688999999966 335666777776666788899999999987777765554442 2221 124999
Q ss_pred EcCCchhhh
Q 021357 118 LRGNHESRQ 126 (313)
Q Consensus 118 lrGNHE~~~ 126 (313)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999864
No 85
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=97.06 E-value=0.0038 Score=60.06 Aligned_cols=42 Identities=26% Similarity=0.427 Sum_probs=33.9
Q ss_pred CCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhh
Q 021357 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 127 (313)
Q Consensus 81 ~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~ 127 (313)
.|++=++||+-||||++-.+++.|...- .+=+--||||-.++
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 4567789999999999999999988763 46677899996443
No 86
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=97.02 E-value=0.021 Score=55.64 Aligned_cols=207 Identities=17% Similarity=0.236 Sum_probs=104.8
Q ss_pred CceeEecCCCC-CHHH----HHHHHHHcCC----CCCCceE-EeeccccC-CC-----------CcHHHHHHHHHhhhhC
Q 021357 54 SPVTICGDIHG-QFHD----LAELFQIGGK----CPDTNYL-FMGDYVDR-GY-----------YSVETVTLLVALKVRY 111 (313)
Q Consensus 54 ~~i~viGDiHG-~~~~----l~~lL~~~~~----~~~~~~v-flGD~vDr-G~-----------~s~e~l~~l~~l~~~~ 111 (313)
.++++++|+|= ...- +.+.++-++- .+..+|+ +.||.||. |- +..+-++.+.++..+-
T Consensus 226 v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~v 305 (481)
T COG1311 226 VYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQV 305 (481)
T ss_pred eEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhC
Confidence 35899999995 3332 3333333322 2233555 57999994 21 2233455555555555
Q ss_pred CC--cEEEEcCCchhhhhHhhhCChHHHHHHhCCchhHHHHHHHHhhCCcEEEEcC-cEEEecCCCCCCccchhhhhhc-
Q 021357 112 PQ--RITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNF- 187 (313)
Q Consensus 112 p~--~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~~~vHgGi~p~~~~~~~i~~~- 187 (313)
|. .+++.+||||..-.........+..+. ++....-.+-+-|....+++ +++..||= +++++...
T Consensus 306 p~~I~v~i~PGnhDa~r~a~PQp~~~~~~ks-----lf~~~n~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~v 374 (481)
T COG1311 306 PEHIKVFIMPGNHDAVRQALPQPHFPELIKS-----LFSLNNLLFVSNPALVSLHGVDVLIYHGR------SIDDIIKLV 374 (481)
T ss_pred CCCceEEEecCCCCccccccCCCCcchhhcc-----cccccceEecCCCcEEEECCEEEEEecCC------CHHHHHhhC
Confidence 65 578999999986443222222221111 11111122333455555544 68899972 33333211
Q ss_pred ccccc-CC------------CCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEE
Q 021357 188 DRVQE-VP------------HEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNW 254 (313)
Q Consensus 188 ~r~~~-~~------------~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~ 254 (313)
++... .+ -.+.+.+-+|.-|.....+.. ++ --+++.+||+|. .|+..
T Consensus 375 P~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD~lVI--------------ee-----vPDv~~~Ghvh~-~g~~~ 434 (481)
T COG1311 375 PGADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKDYLVI--------------EE-----VPDVFHTGHVHK-FGTGV 434 (481)
T ss_pred CCCCccchHHHHHHHHHhcccCCCCCCccccccCCcCceee--------------cc-----CCcEEEEccccc-cceeE
Confidence 11100 00 012234445554433211111 01 138899999997 67777
Q ss_pred ecCCeEEEEecCCCCCCCCCCcEEEEEEcCC-CceEEEEeec
Q 021357 255 AHEQKVVTIFSAPNYCYRCGNMASILEVDDC-RSHTFIQFEP 295 (313)
Q Consensus 255 ~~~~~~iti~S~~~~~~~~~n~~avl~i~~~-~~~~~~~~~~ 295 (313)
..+.+++...|.+... ..+-++.|+.. ..+....+..
T Consensus 435 y~gv~~vns~T~q~qT----efqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 435 YEGVNLVNSGTWQEQT----EFQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred EeccceEEeeeecchh----ccceEEEecCcccceeEEeccc
Confidence 7777888888876663 23455556543 4444444443
No 87
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.95 E-value=0.03 Score=46.22 Aligned_cols=128 Identities=22% Similarity=0.292 Sum_probs=82.3
Q ss_pred eeEecCCCC--CHHHHHHHHHHcCCCC-CCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhC
Q 021357 56 VTICGDIHG--QFHDLAELFQIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (313)
Q Consensus 56 i~viGDiHG--~~~~l~~lL~~~~~~~-~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~ 132 (313)
+.++||+|= +..+|-.-++++-.+. -.+++++|++. |.|.+++|..+. +.++++||-.|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 678999995 3334444444443443 36688999975 458999998876 4699999987753
Q ss_pred ChHHHHHHhCCchhHHHHHHHHhhCCcE--EEEc-CcEEEecCCCCCCccchhhhhhccccccCCCCCccccccccCCCC
Q 021357 133 FYDECLRKYGNANIWKIFTDLFDYFPLT--ALVE-SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD 209 (313)
Q Consensus 133 ~~~e~~~~~~~~~~~~~~~~~~~~lP~~--~~i~-~~~~~vHgGi~p~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~ 209 (313)
...|.. ..++ -++-++||-- -+=|+||
T Consensus 67 ----------------------~~yP~~kvvtvGqfkIG~chGhq--------------------------ViP~gd~-- 96 (183)
T KOG3325|consen 67 ----------------------LKYPENKVVTVGQFKIGLCHGHQ--------------------------VIPWGDP-- 96 (183)
T ss_pred ----------------------ccCCccceEEeccEEEEeecCcE--------------------------eecCCCH--
Confidence 111222 2222 2789999831 1226655
Q ss_pred CCCCCcCCCCCccccCHHHHHHHHHhCCceEEEeeccccccceEEecCCeEEEEecCC
Q 021357 210 RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAP 267 (313)
Q Consensus 210 ~~~~~~~~rg~~~~fg~~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~ 267 (313)
+++.-..+..++++++.|||+..+-|+.. ++-.++-.||+
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~e-g~ffvnPGSaT 136 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEHE-GKFFVNPGSAT 136 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEeC-CcEEeCCCccc
Confidence 45666677789999999999987766542 22334445553
No 88
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.88 E-value=0.0016 Score=58.60 Aligned_cols=66 Identities=29% Similarity=0.328 Sum_probs=44.2
Q ss_pred ceeEecCCCCCH---------HHHHHHHHHcCCCCCC-ceEEeeccccCCCCcH-----HHHHHHHHhhhhCCCcEEEEc
Q 021357 55 PVTICGDIHGQF---------HDLAELFQIGGKCPDT-NYLFMGDYVDRGYYSV-----ETVTLLVALKVRYPQRITILR 119 (313)
Q Consensus 55 ~i~viGDiHG~~---------~~l~~lL~~~~~~~~~-~~vflGD~vDrG~~s~-----e~l~~l~~l~~~~p~~v~~lr 119 (313)
+|+.++|+||.+ ..+..+++.......+ .++..||+++..+.+. .+++.+..+. . -++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~-d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----Y-DAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----C-CEEee
Confidence 689999999876 5667777776544444 4556899999877543 4555555442 2 23456
Q ss_pred CCchhh
Q 021357 120 GNHESR 125 (313)
Q Consensus 120 GNHE~~ 125 (313)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999953
No 89
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.85 E-value=0.0021 Score=54.83 Aligned_cols=49 Identities=22% Similarity=0.276 Sum_probs=31.2
Q ss_pred CCCCCCceEEeeccccCCCCc--HH---HHHHHHHhhhh-C----CCcEEEEcCCchhh
Q 021357 77 GKCPDTNYLFMGDYVDRGYYS--VE---TVTLLVALKVR-Y----PQRITILRGNHESR 125 (313)
Q Consensus 77 ~~~~~~~~vflGD~vDrG~~s--~e---~l~~l~~l~~~-~----p~~v~~lrGNHE~~ 125 (313)
...+.+.+|++||++|.+... .+ .+..+.++... . +-.++++.||||..
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345567899999999988643 22 33333332211 1 23599999999975
No 90
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.79 E-value=0.0046 Score=51.41 Aligned_cols=66 Identities=20% Similarity=0.224 Sum_probs=42.2
Q ss_pred eeEecCCCC------------CHHHHHH-HHHHcC--CCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcC
Q 021357 56 VTICGDIHG------------QFHDLAE-LFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRG 120 (313)
Q Consensus 56 i~viGDiHG------------~~~~l~~-lL~~~~--~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrG 120 (313)
++++||+|= +.+.... +|.... ..|+|.+++|||+.-.-.+-.+..+++.+| |+++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 788999984 3333322 233221 356788999999975433334444545444 578999999
Q ss_pred Cchhh
Q 021357 121 NHESR 125 (313)
Q Consensus 121 NHE~~ 125 (313)
|||-.
T Consensus 82 NhDk~ 86 (186)
T COG4186 82 NHDKC 86 (186)
T ss_pred CCCCC
Confidence 99964
No 91
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=96.65 E-value=0.12 Score=48.46 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=40.6
Q ss_pred CCceeEecCCCCCHH-----------------HH--HHHH-HHcCCCCCCceEEeeccccCCCCcHH---HHHHHHHhhh
Q 021357 53 KSPVTICGDIHGQFH-----------------DL--AELF-QIGGKCPDTNYLFMGDYVDRGYYSVE---TVTLLVALKV 109 (313)
Q Consensus 53 ~~~i~viGDiHG~~~-----------------~l--~~lL-~~~~~~~~~~~vflGD~vDrG~~s~e---~l~~l~~l~~ 109 (313)
.-||+.+.|+|=... ++ ...+ +.+.....|.+||+||.|+. ..... ++....+=.+
T Consensus 53 ~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I 131 (379)
T KOG1432|consen 53 TFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAI 131 (379)
T ss_pred ceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHh
Confidence 347999999995443 11 0111 12334556889999999985 33322 2222222222
Q ss_pred hCCCcEEEEcCCchhh
Q 021357 110 RYPQRITILRGNHESR 125 (313)
Q Consensus 110 ~~p~~v~~lrGNHE~~ 125 (313)
.+.=-...+.||||..
T Consensus 132 ~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 132 DRKIPWAAVLGNHDDE 147 (379)
T ss_pred hcCCCeEEEecccccc
Confidence 2221256899999975
No 92
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.58 E-value=0.12 Score=46.98 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=31.7
Q ss_pred eEEEeeccccccceEEec--CCeEEEEecCCCCCCCCCCcEEEEEEc-CCCceEEEEe
Q 021357 239 KLIARAHQLVMDGFNWAH--EQKVVTIFSAPNYCYRCGNMASILEVD-DCRSHTFIQF 293 (313)
Q Consensus 239 ~~iVrGHt~~~~G~~~~~--~~~~iti~S~~~~~~~~~n~~avl~i~-~~~~~~~~~~ 293 (313)
++++.||++. .|..... +++-+.+-|.|.+. ..+.++.+| ++.+++.++|
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs----~t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFS----KTGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcC----cCCEEEEEECCcCcEEEEeC
Confidence 7899999996 3444332 25667777777774 345555555 4666666654
No 93
>PLN02533 probable purple acid phosphatase
Probab=96.45 E-value=0.0035 Score=61.24 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=43.2
Q ss_pred CCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcH---HHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~---e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
..+++++||+|-. ......++.+.....+-++++||+++.+.... +-.+++..+....| ++.+.||||..
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~ 211 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELE 211 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCcccccc
Confidence 4579999999632 22233444444445677888999997543221 12333344444455 88999999975
No 94
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.42 E-value=0.0083 Score=53.52 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=45.8
Q ss_pred cCCceeEecCCCCCHHHHH----------------HHHH-HcCCCCCCceEEeeccccCCCC-----cHHHHHHHHHhhh
Q 021357 52 VKSPVTICGDIHGQFHDLA----------------ELFQ-IGGKCPDTNYLFMGDYVDRGYY-----SVETVTLLVALKV 109 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~~l~----------------~lL~-~~~~~~~~~~vflGD~vDrG~~-----s~e~l~~l~~l~~ 109 (313)
...+..||+|+|=.++... +.+. .+.....+++|++||+-.-.+. ..++-.++..+..
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 4678999999997766433 2222 2223446789999999654332 2334444444443
Q ss_pred hCCCcEEEEcCCchhhh
Q 021357 110 RYPQRITILRGNHESRQ 126 (313)
Q Consensus 110 ~~p~~v~~lrGNHE~~~ 126 (313)
. .+++++||||...
T Consensus 98 ~---evi~i~GNHD~~i 111 (235)
T COG1407 98 R---EVIIIRGNHDNGI 111 (235)
T ss_pred C---cEEEEeccCCCcc
Confidence 2 4999999999764
No 95
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=96.33 E-value=0.034 Score=51.33 Aligned_cols=72 Identities=22% Similarity=0.248 Sum_probs=42.3
Q ss_pred eeEecCCCCC--HHHHHHHHHHcCCC--CCCceEEeeccccCCCCcH--H------HHHHHHHhhhhCCC-cEEEEcCCc
Q 021357 56 VTICGDIHGQ--FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYPQ-RITILRGNH 122 (313)
Q Consensus 56 i~viGDiHG~--~~~l~~lL~~~~~~--~~~~~vflGD~vDrG~~s~--e------~l~~l~~l~~~~p~-~v~~lrGNH 122 (313)
..-.|+-.=+ ...+..+++.+... +.+-+|++||+++.+.... + .-.+...++..+|. .++.+.|||
T Consensus 40 ~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 40 AGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred CCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 3445555422 23456666655433 5677889999998775421 1 12223334443333 599999999
Q ss_pred hhhhh
Q 021357 123 ESRQI 127 (313)
Q Consensus 123 E~~~~ 127 (313)
|....
T Consensus 120 D~~p~ 124 (296)
T cd00842 120 DSYPV 124 (296)
T ss_pred CCCcc
Confidence 98644
No 96
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.31 E-value=0.005 Score=56.46 Aligned_cols=65 Identities=22% Similarity=0.256 Sum_probs=41.2
Q ss_pred ceeEecCCCCCH----------------HHHHHHHHHcCCCCCCceEE-eeccccCCCCc-----------HHHHHHHHH
Q 021357 55 PVTICGDIHGQF----------------HDLAELFQIGGKCPDTNYLF-MGDYVDRGYYS-----------VETVTLLVA 106 (313)
Q Consensus 55 ~i~viGDiHG~~----------------~~l~~lL~~~~~~~~~~~vf-lGD~vDrG~~s-----------~e~l~~l~~ 106 (313)
+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++.+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 33566666665443444444 79999865422 235555555
Q ss_pred hhhhCCCcEEEEcCCchh
Q 021357 107 LKVRYPQRITILRGNHES 124 (313)
Q Consensus 107 l~~~~p~~v~~lrGNHE~ 124 (313)
+.. -++..||||.
T Consensus 82 ~g~-----d~~~lGNHe~ 94 (277)
T cd07410 82 LGY-----DAGTLGNHEF 94 (277)
T ss_pred cCC-----CEEeecccCc
Confidence 532 2455699995
No 97
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=96.05 E-value=0.01 Score=50.56 Aligned_cols=44 Identities=27% Similarity=0.337 Sum_probs=30.2
Q ss_pred CCCCceEEeecccc--CCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhh
Q 021357 79 CPDTNYLFMGDYVD--RGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (313)
Q Consensus 79 ~~~~~~vflGD~vD--rG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~ 126 (313)
.++|.++.-||+-- |=+...+-+.++-.| |+.-+++|||||++.
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 44555666799953 334455556666554 788899999999864
No 98
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=95.94 E-value=0.012 Score=45.21 Aligned_cols=50 Identities=18% Similarity=0.105 Sum_probs=37.3
Q ss_pred CCCCC-CCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccc
Q 021357 2 GANSL-STDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQP 51 (313)
Q Consensus 2 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~~ 51 (313)
|.++- ...|.+.+++|+++++++..++...+..|+.++.++|+++|++++
T Consensus 44 GP~l~~~~it~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVe 94 (95)
T PF08321_consen 44 GPRLEDEPITLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVE 94 (95)
T ss_dssp SS--BTTB--HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccC
Confidence 44554 578888999999999999999999999999999999999999875
No 99
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.90 E-value=0.019 Score=49.91 Aligned_cols=65 Identities=15% Similarity=0.193 Sum_probs=40.8
Q ss_pred cCCCCCHHHHHHHHHHcC-CCCCCceEEeeccccCCCCcH-HHHHHHHHhhhhC---------------------CCcEE
Q 021357 60 GDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRY---------------------PQRIT 116 (313)
Q Consensus 60 GDiHG~~~~l~~lL~~~~-~~~~~~~vflGD~vDrG~~s~-e~l~~l~~l~~~~---------------------p~~v~ 116 (313)
=|++|+=.=|.++++.+. .-..+.++||||++|.|--+- |=...+.+.+..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 355666666777776553 344677889999999874322 2223334433322 13568
Q ss_pred EEcCCchh
Q 021357 117 ILRGNHES 124 (313)
Q Consensus 117 ~lrGNHE~ 124 (313)
.|.||||.
T Consensus 103 ~V~GNHDI 110 (193)
T cd08164 103 NIAGNHDV 110 (193)
T ss_pred EECCcccC
Confidence 99999996
No 100
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.76 E-value=0.014 Score=53.04 Aligned_cols=65 Identities=23% Similarity=0.246 Sum_probs=41.0
Q ss_pred ceeEecCCCCCH----------HHHHHHHHHcCCCCCCceEEeeccccCCCCc-----HHHHHHHHHhhhhCCCcEEEEc
Q 021357 55 PVTICGDIHGQF----------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILR 119 (313)
Q Consensus 55 ~i~viGDiHG~~----------~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s-----~e~l~~l~~l~~~~p~~v~~lr 119 (313)
+|+.++|+||++ ..+..+++.....+.+-++..||+++..+.+ ..++..+..+.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 578899999974 4456666665443444455689999875532 234444444432 24 456
Q ss_pred CCchh
Q 021357 120 GNHES 124 (313)
Q Consensus 120 GNHE~ 124 (313)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 101
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=95.71 E-value=0.029 Score=52.62 Aligned_cols=74 Identities=20% Similarity=0.324 Sum_probs=47.3
Q ss_pred CceeEecCCCCCHHHHHH---HHHHcCCCCCCceEEeeccc-cCCC---CcHHH---HHHHHH------hhhhCCCcEEE
Q 021357 54 SPVTICGDIHGQFHDLAE---LFQIGGKCPDTNYLFMGDYV-DRGY---YSVET---VTLLVA------LKVRYPQRITI 117 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~---lL~~~~~~~~~~~vflGD~v-DrG~---~s~e~---l~~l~~------l~~~~p~~v~~ 117 (313)
|||.|=|=-||.++.+-+ ..++.|-.+.|.++++||+= =|.. +++.+ +..+.. =...+|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999998874 44555666788899999993 1221 12221 111111 11234544578
Q ss_pred EcCCchhhhh
Q 021357 118 LRGNHESRQI 127 (313)
Q Consensus 118 lrGNHE~~~~ 127 (313)
|-||||.+..
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999998753
No 102
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.58 E-value=0.026 Score=51.43 Aligned_cols=25 Identities=8% Similarity=0.013 Sum_probs=21.2
Q ss_pred HHHHHHHHHhCCceEEEeecccccc
Q 021357 226 QDISEQFNHTNNLKLIARAHQLVMD 250 (313)
Q Consensus 226 ~~~~~~~l~~~~~~~iVrGHt~~~~ 250 (313)
.+.+.++++++++++++.||++...
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccce
Confidence 4567888999999999999999754
No 103
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.47 E-value=0.013 Score=54.17 Aligned_cols=65 Identities=25% Similarity=0.329 Sum_probs=42.1
Q ss_pred ceeEecCCCCCHH--------------HHHHHHHHcCCCCC-CceEEeeccccCCCC-c-----HHHHHHHHHhhhhCCC
Q 021357 55 PVTICGDIHGQFH--------------DLAELFQIGGKCPD-TNYLFMGDYVDRGYY-S-----VETVTLLVALKVRYPQ 113 (313)
Q Consensus 55 ~i~viGDiHG~~~--------------~l~~lL~~~~~~~~-~~~vflGD~vDrG~~-s-----~e~l~~l~~l~~~~p~ 113 (313)
+|+.++|+||++. .+..+++....... ..++..||++...+. + ..+++.+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 5788999998754 36666766554333 345558999976653 2 2456666665432
Q ss_pred cEEEEcCCchh
Q 021357 114 RITILRGNHES 124 (313)
Q Consensus 114 ~v~~lrGNHE~ 124 (313)
+ +..||||.
T Consensus 79 -a-~t~GNHef 87 (288)
T cd07412 79 -A-SAVGNHEF 87 (288)
T ss_pred -e-eeeccccc
Confidence 3 55699995
No 104
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=94.66 E-value=0.017 Score=56.13 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=91.1
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCcccc----CCceeEecCCCCCHHHHHHHHHHcCCCCC-CceEEeeccccCCCCcHHH
Q 021357 26 PLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGGKCPD-TNYLFMGDYVDRGYYSVET 100 (313)
Q Consensus 26 ~~~~~~~~~l~~~a~~~~~~e~~~~~~----~~~i~viGDiHG~~~~l~~lL~~~~~~~~-~~~vflGD~vDrG~~s~e~ 100 (313)
-|...++..+++.+.+++.-+|+.... +.-.+.++|.||.+.++.++++.- +.. .-|++=|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 467888999999999999999986532 344789999999999998887753 222 3388899999999999999
Q ss_pred HHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHH
Q 021357 101 VTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECL 138 (313)
Q Consensus 101 l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~ 138 (313)
+..+...+...|....+.|++||+-.+-..++|..+..
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~ 129 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAIL 129 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhccc
Confidence 99999999999999999999999987766666655443
No 105
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.47 E-value=0.074 Score=48.94 Aligned_cols=65 Identities=18% Similarity=0.195 Sum_probs=39.4
Q ss_pred ceeEecCCCCCH---------------------HHHHHHHHHcCCCCCCceE-EeeccccCCCC-----cHHHHHHHHHh
Q 021357 55 PVTICGDIHGQF---------------------HDLAELFQIGGKCPDTNYL-FMGDYVDRGYY-----SVETVTLLVAL 107 (313)
Q Consensus 55 ~i~viGDiHG~~---------------------~~l~~lL~~~~~~~~~~~v-flGD~vDrG~~-----s~e~l~~l~~l 107 (313)
+|+.++|+||++ ..+..+++.......+.++ -.||++...+. ...+++.+.++
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 478889999864 4455566665433333344 48999987653 23445555554
Q ss_pred hhhCCCcEEEEcCCchh
Q 021357 108 KVRYPQRITILRGNHES 124 (313)
Q Consensus 108 ~~~~p~~v~~lrGNHE~ 124 (313)
.. .+ +..||||.
T Consensus 82 g~----D~-~~lGNHef 93 (281)
T cd07409 82 GY----DA-MTLGNHEF 93 (281)
T ss_pred CC----CE-EEeccccc
Confidence 32 24 44599995
No 106
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.40 E-value=0.06 Score=49.00 Aligned_cols=65 Identities=23% Similarity=0.172 Sum_probs=38.5
Q ss_pred ceeEecCCCCCH----------------------HHHHHHHHHcCCC-CCCce-EEeeccccCCCCc-----HHHHHHHH
Q 021357 55 PVTICGDIHGQF----------------------HDLAELFQIGGKC-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 105 (313)
Q Consensus 55 ~i~viGDiHG~~----------------------~~l~~lL~~~~~~-~~~~~-vflGD~vDrG~~s-----~e~l~~l~ 105 (313)
.|+.++|+||.+ ..+..+++..... ..+.+ +..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 367788888864 3345566655433 34444 4589999876533 24455555
Q ss_pred HhhhhCCCcEEEEcCCchhh
Q 021357 106 ALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 106 ~l~~~~p~~v~~lrGNHE~~ 125 (313)
++. --.+. ||||..
T Consensus 82 ~~g-----~da~~-GNHefd 95 (264)
T cd07411 82 ALG-----VDAMV-GHWEFT 95 (264)
T ss_pred hhC-----CeEEe-cccccc
Confidence 543 12344 999953
No 107
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=93.67 E-value=0.12 Score=46.80 Aligned_cols=65 Identities=28% Similarity=0.233 Sum_probs=42.2
Q ss_pred ceeEecCCC----------CCHHHHHHHHHHcCCCCCC-ceEEeeccccCCCC-----cHHHHHHHHHhhhhCCCcEEEE
Q 021357 55 PVTICGDIH----------GQFHDLAELFQIGGKCPDT-NYLFMGDYVDRGYY-----SVETVTLLVALKVRYPQRITIL 118 (313)
Q Consensus 55 ~i~viGDiH----------G~~~~l~~lL~~~~~~~~~-~~vflGD~vDrG~~-----s~e~l~~l~~l~~~~p~~v~~l 118 (313)
+|.-+.|+| |.+..+..+++.......+ -++..||+++..+. ...+++.+..+.. -+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEe
Confidence 355667777 4567777788776544444 45558999987653 2456666666542 3567
Q ss_pred cCCchh
Q 021357 119 RGNHES 124 (313)
Q Consensus 119 rGNHE~ 124 (313)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899995
No 108
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.11 E-value=0.11 Score=57.00 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=43.4
Q ss_pred CceeEecCCCCCH---HHHHHHHHHcCCCCCCceEE-eeccccCCCCc-----HHHHHHHHHhhhhCCCcEEEEcCCchh
Q 021357 54 SPVTICGDIHGQF---HDLAELFQIGGKCPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 124 (313)
Q Consensus 54 ~~i~viGDiHG~~---~~l~~lL~~~~~~~~~~~vf-lGD~vDrG~~s-----~e~l~~l~~l~~~~p~~v~~lrGNHE~ 124 (313)
.+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++++..+.. -++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 4699999999875 44555666554333444544 89999877643 345666655532 3568999995
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=93.09 E-value=0.16 Score=46.41 Aligned_cols=67 Identities=15% Similarity=0.113 Sum_probs=49.1
Q ss_pred CceeEecCCCCC--HHHHHHHHHHcCCCCC-CceEEeeccccCC-CCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 54 SPVTICGDIHGQ--FHDLAELFQIGGKCPD-TNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 54 ~~i~viGDiHG~--~~~l~~lL~~~~~~~~-~~~vflGD~vDrG-~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
|||.++|||=|. ...+...|..+..... |-+|.-||...-| .-+.++.+.|.+... .++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 689999999999 5677888877765433 4444579998766 346788888887754 36666 999964
No 110
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.45 E-value=0.26 Score=47.46 Aligned_cols=72 Identities=19% Similarity=0.381 Sum_probs=45.4
Q ss_pred CCceeEecCCC--C---------CHH------HHHHHHHHcC-CCCCCceEEeeccccCCCC--cHHHHHHHHHhhhhCC
Q 021357 53 KSPVTICGDIH--G---------QFH------DLAELFQIGG-KCPDTNYLFMGDYVDRGYY--SVETVTLLVALKVRYP 112 (313)
Q Consensus 53 ~~~i~viGDiH--G---------~~~------~l~~lL~~~~-~~~~~~~vflGD~vDrG~~--s~e~l~~l~~l~~~~p 112 (313)
..||..|+|.| | -++ -|.+.++..- .-..+.++||||++|-|.. .-|=-....+++.-+|
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~ 127 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFG 127 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhC
Confidence 45899999976 3 122 1233333322 2345667789999998875 3344455555555554
Q ss_pred C----cEEEEcCCchh
Q 021357 113 Q----RITILRGNHES 124 (313)
Q Consensus 113 ~----~v~~lrGNHE~ 124 (313)
. .+..+.||||-
T Consensus 128 ~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 128 RKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCCeeEEeCCcccc
Confidence 3 68899999995
No 111
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=92.16 E-value=0.16 Score=46.92 Aligned_cols=66 Identities=18% Similarity=0.069 Sum_probs=37.6
Q ss_pred ceeEecCCCCCHHH----------HHHHHHHcCC-----CCCCceEEeeccccCCCC-----cHHHHHHHHHhhhhCCCc
Q 021357 55 PVTICGDIHGQFHD----------LAELFQIGGK-----CPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYPQR 114 (313)
Q Consensus 55 ~i~viGDiHG~~~~----------l~~lL~~~~~-----~~~~~~vflGD~vDrG~~-----s~e~l~~l~~l~~~~p~~ 114 (313)
.|+.++|+||++.. +..+++.... .+..-++-.||.+...+. ...+++++.++...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 47889999997532 4455554432 222333348999843332 23455566665432
Q ss_pred EEEEcCCchhh
Q 021357 115 ITILRGNHESR 125 (313)
Q Consensus 115 v~~lrGNHE~~ 125 (313)
+ ...||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 4 445999953
No 112
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=91.79 E-value=0.55 Score=45.79 Aligned_cols=34 Identities=9% Similarity=0.009 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCceEEEeeccccccceEEecCCeE
Q 021357 227 DISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKV 260 (313)
Q Consensus 227 ~~~~~~l~~~~~~~iVrGHt~~~~G~~~~~~~~~ 260 (313)
..+|+++-++++|+++-||.+.-+.....++.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 4689999999999999999998666554444443
No 113
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=90.27 E-value=0.39 Score=41.84 Aligned_cols=72 Identities=11% Similarity=0.175 Sum_probs=40.7
Q ss_pred eeEecCCCCC-----HHHHHHHHHHcC-CCCCCceEEeeccccCCCCcH----------HHHHHHHHhhhh---C--CCc
Q 021357 56 VTICGDIHGQ-----FHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSV----------ETVTLLVALKVR---Y--PQR 114 (313)
Q Consensus 56 i~viGDiHG~-----~~~l~~lL~~~~-~~~~~~~vflGD~vDrG~~s~----------e~l~~l~~l~~~---~--p~~ 114 (313)
|++++|+|=. ++.|.++|+... ..+.+.+|++|+++|.-.... .....+..+... . --+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5778888865 557788888777 666778999999999622111 111122222211 1 137
Q ss_pred EEEEcCCchhhhh
Q 021357 115 ITILRGNHESRQI 127 (313)
Q Consensus 115 v~~lrGNHE~~~~ 127 (313)
|++++|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997644
No 114
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=90.12 E-value=0.38 Score=45.06 Aligned_cols=65 Identities=25% Similarity=0.231 Sum_probs=40.7
Q ss_pred ceeEecCCCCCHH------HHHHHHHHcCC-----CCCCceEEeeccccCCCC-------------cHHHHHHHHHhhhh
Q 021357 55 PVTICGDIHGQFH------DLAELFQIGGK-----CPDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVR 110 (313)
Q Consensus 55 ~i~viGDiHG~~~------~l~~lL~~~~~-----~~~~~~vflGD~vDrG~~-------------s~e~l~~l~~l~~~ 110 (313)
.|+-+.|+||++. .+..+++.... .+...++..||.+.-++. ...+++++.++..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 4678899999953 44444554322 233334458999875442 3456677767654
Q ss_pred CCCcEEEEcCCchh
Q 021357 111 YPQRITILRGNHES 124 (313)
Q Consensus 111 ~p~~v~~lrGNHE~ 124 (313)
=.+..||||.
T Consensus 81 ----Da~tlGNHEF 90 (313)
T cd08162 81 ----QAIALGNHEF 90 (313)
T ss_pred ----cEEecccccc
Confidence 3477999994
No 115
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=90.11 E-value=0.58 Score=42.55 Aligned_cols=66 Identities=20% Similarity=0.241 Sum_probs=45.6
Q ss_pred ceeEecCCCCCHH--HHHHHHHHcCCCCCCceE-EeeccccCC-CCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 55 PVTICGDIHGQFH--DLAELFQIGGKCPDTNYL-FMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 55 ~i~viGDiHG~~~--~l~~lL~~~~~~~~~~~v-flGD~vDrG-~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
||.+||||=|... .+...|..+......+++ .-||..--| .-+.++.+.|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 6899999999776 456677666443333344 469998766 3577788888877643 5555 999853
No 116
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=90.03 E-value=0.31 Score=48.82 Aligned_cols=69 Identities=30% Similarity=0.349 Sum_probs=44.7
Q ss_pred cCCceeEecCCCCCHH------------HH---HHHHHHcCCCCCCceEE-eeccccCCC------CcHHHHHHHHHhhh
Q 021357 52 VKSPVTICGDIHGQFH------------DL---AELFQIGGKCPDTNYLF-MGDYVDRGY------YSVETVTLLVALKV 109 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~------------~l---~~lL~~~~~~~~~~~vf-lGD~vDrG~------~s~e~l~~l~~l~~ 109 (313)
...+|+-+.|+||++. .+ ..+++.........+++ .||+++..+ .....++++..++-
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y 104 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY 104 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC
Confidence 3557899999999999 33 33344333322334444 899998743 34457777777764
Q ss_pred hCCCcEEEEcCCchhh
Q 021357 110 RYPQRITILRGNHESR 125 (313)
Q Consensus 110 ~~p~~v~~lrGNHE~~ 125 (313)
. ..-.||||.-
T Consensus 105 D-----a~tiGNHEFd 115 (517)
T COG0737 105 D-----AMTLGNHEFD 115 (517)
T ss_pred c-----EEeecccccc
Confidence 3 4778999964
No 117
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=88.71 E-value=0.42 Score=44.09 Aligned_cols=68 Identities=21% Similarity=0.151 Sum_probs=39.0
Q ss_pred CCceeEecCCCCCHH-------------HHHHHHHHc----CC-CCCCceEEeeccccCCCCc-------HHHHHHHHHh
Q 021357 53 KSPVTICGDIHGQFH-------------DLAELFQIG----GK-CPDTNYLFMGDYVDRGYYS-------VETVTLLVAL 107 (313)
Q Consensus 53 ~~~i~viGDiHG~~~-------------~l~~lL~~~----~~-~~~~~~vflGD~vDrG~~s-------~e~l~~l~~l 107 (313)
+-+|+-+.|+||++. .+.++.+.. +. .++..++-.||.+...+.+ ..+++++.++
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m 84 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM 84 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc
Confidence 346888999999763 122322222 22 2222334489998765432 2345555555
Q ss_pred hhhCCCcEEEEcCCchhh
Q 021357 108 KVRYPQRITILRGNHESR 125 (313)
Q Consensus 108 ~~~~p~~v~~lrGNHE~~ 125 (313)
.. =.+..||||..
T Consensus 85 gy-----Da~tlGNHEFd 97 (282)
T cd07407 85 PY-----DLLTIGNHELY 97 (282)
T ss_pred CC-----cEEeecccccC
Confidence 42 45789999974
No 118
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=88.24 E-value=5.6 Score=34.32 Aligned_cols=85 Identities=18% Similarity=0.273 Sum_probs=63.6
Q ss_pred CceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChH----------------HHHHHhCCch
Q 021357 82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 145 (313)
Q Consensus 82 ~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~----------------e~~~~~~~~~ 145 (313)
..+|++|- |-+.-|+++++..++..|-++-+ +.|+-|.|..+....|.. |..+.| -..
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~y-I~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSY-IAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEE-EEecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 45888985 88899999999999999876554 489999998877555432 222222 135
Q ss_pred hHHHHHHHHhhCCcEEEEcCcEEEecC
Q 021357 146 IWKIFTDLFDYFPLTALVESEIFCLHG 172 (313)
Q Consensus 146 ~~~~~~~~~~~lP~~~~i~~~~~~vHg 172 (313)
++..+...+.++++.+.+--+++.+.|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 677788888889999888777888887
No 119
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=88.13 E-value=1.2 Score=44.17 Aligned_cols=59 Identities=19% Similarity=0.162 Sum_probs=43.7
Q ss_pred ccCCceeEecCCCCC------------HHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhh
Q 021357 51 PVKSPVTICGDIHGQ------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKV 109 (313)
Q Consensus 51 ~~~~~i~viGDiHG~------------~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~ 109 (313)
+...||.|..|.|=. +..|..+|+.+.....|-++.-||++.-..-|..+|....++..
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~lLR 81 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLELLR 81 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHHHH
Confidence 456789999999953 45788899888776677777789999887777776655555443
No 120
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.76 E-value=0.58 Score=48.08 Aligned_cols=66 Identities=18% Similarity=0.121 Sum_probs=40.7
Q ss_pred CceeEecCCCCCHH----------------HHHHHHHHcCCC-CCCceEEeeccccCCCCc-------------HHHHHH
Q 021357 54 SPVTICGDIHGQFH----------------DLAELFQIGGKC-PDTNYLFMGDYVDRGYYS-------------VETVTL 103 (313)
Q Consensus 54 ~~i~viGDiHG~~~----------------~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s-------------~e~l~~ 103 (313)
-+|+-..|+||++. .+..+++..... ++..+|-.||.+...+.+ ..++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 46888999999864 234455544322 233344589998755432 235555
Q ss_pred HHHhhhhCCCcEEEEcCCchh
Q 021357 104 LVALKVRYPQRITILRGNHES 124 (313)
Q Consensus 104 l~~l~~~~p~~v~~lrGNHE~ 124 (313)
+..+.. =....||||.
T Consensus 83 mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HhhcCc-----cEEecccccc
Confidence 655543 3478899994
No 121
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=87.58 E-value=0.64 Score=47.98 Aligned_cols=68 Identities=18% Similarity=0.141 Sum_probs=43.1
Q ss_pred cCCceeEecCCCCCHH----------------HHHHHHHHcCCC-CCCceEEeeccccCCCCc-------------HHHH
Q 021357 52 VKSPVTICGDIHGQFH----------------DLAELFQIGGKC-PDTNYLFMGDYVDRGYYS-------------VETV 101 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~----------------~l~~lL~~~~~~-~~~~~vflGD~vDrG~~s-------------~e~l 101 (313)
...+|+...|+||++. .+..+++..... ++..+|-.||.+...+.+ ..++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 4668999999999864 234455544322 333445589998765532 1356
Q ss_pred HHHHHhhhhCCCcEEEEcCCchh
Q 021357 102 TLLVALKVRYPQRITILRGNHES 124 (313)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~ 124 (313)
..+..+.. =....||||.
T Consensus 104 ~amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred HHHHhcCC-----cEEeccchhh
Confidence 66666643 3578899994
No 122
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=86.42 E-value=0.83 Score=50.36 Aligned_cols=67 Identities=24% Similarity=0.274 Sum_probs=41.6
Q ss_pred CCceeEecCCCCCHH----------------HHHHHHHHcCCCCCCceEE-eeccccCCCC--------------cHHHH
Q 021357 53 KSPVTICGDIHGQFH----------------DLAELFQIGGKCPDTNYLF-MGDYVDRGYY--------------SVETV 101 (313)
Q Consensus 53 ~~~i~viGDiHG~~~----------------~l~~lL~~~~~~~~~~~vf-lGD~vDrG~~--------------s~e~l 101 (313)
.-+|+.++|+||++. .+..+++.........+++ .||.+...+- ...++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 457999999999853 3344555543333334444 8999986551 22455
Q ss_pred HHHHHhhhhCCCcEEEEcCCchh
Q 021357 102 TLLVALKVRYPQRITILRGNHES 124 (313)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~ 124 (313)
..+..+.. =....||||.
T Consensus 121 ~~mN~lgy-----Da~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALGY-----DAGTLGNHEF 138 (1163)
T ss_pred HHHhhcCc-----cEEeeccccc
Confidence 55555542 3467999995
No 123
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=86.34 E-value=0.97 Score=41.24 Aligned_cols=66 Identities=20% Similarity=0.262 Sum_probs=42.5
Q ss_pred CCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCC-cEEEEcCCchhhh
Q 021357 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQ 126 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~-~v~~lrGNHE~~~ 126 (313)
..|.+.|+|.|+...... ..++.|.++-+||+..-|. +.|+..+=..+.. .|. .=+.|+||||...
T Consensus 61 ~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gs-lph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGS-LPHEYKIVIAGNHELTF 127 (305)
T ss_pred ceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhcc-CcceeeEEEeeccceee
Confidence 468999999997665543 2344555677999977654 4555554443322 222 3568999999753
No 124
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.79 E-value=2.4 Score=41.41 Aligned_cols=69 Identities=22% Similarity=0.384 Sum_probs=49.7
Q ss_pred CCceeEecCCCCCHHHHHHHHHHcCC--CCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCc
Q 021357 53 KSPVTICGDIHGQFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNH 122 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~l~~lL~~~~~--~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNH 122 (313)
+.+|.|+||.-|+++.|.+-.+.+.. .|-+.++++|++++--.++-|++.+....+ ..|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 47999999999999988776666543 345778889999987556677776655533 3454566666654
No 125
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.24 E-value=1.4 Score=46.66 Aligned_cols=67 Identities=22% Similarity=0.177 Sum_probs=41.1
Q ss_pred CCceeEecCCCCCHHH----------------HHHHHHHcCCC-CCCceEEeeccccCCCCc--------------HHHH
Q 021357 53 KSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYS--------------VETV 101 (313)
Q Consensus 53 ~~~i~viGDiHG~~~~----------------l~~lL~~~~~~-~~~~~vflGD~vDrG~~s--------------~e~l 101 (313)
..+|+-..|+||++.. +..+++..... ++..+|-.||++...+.+ ..++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 4578999999998642 23344444322 233344589998754422 1356
Q ss_pred HHHHHhhhhCCCcEEEEcCCchh
Q 021357 102 TLLVALKVRYPQRITILRGNHES 124 (313)
Q Consensus 102 ~~l~~l~~~~p~~v~~lrGNHE~ 124 (313)
+.+..|.. =..-.||||.
T Consensus 195 ~amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 195 AALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHHhccCC-----CEEEechhhc
Confidence 66666643 3578899994
No 126
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=82.22 E-value=2 Score=43.40 Aligned_cols=65 Identities=20% Similarity=0.163 Sum_probs=38.7
Q ss_pred ceeEecCCCCCHHH---------------------HHHHHHHcCC-CCCCceEEeeccccCCCCc-----HHHHHHHHHh
Q 021357 55 PVTICGDIHGQFHD---------------------LAELFQIGGK-CPDTNYLFMGDYVDRGYYS-----VETVTLLVAL 107 (313)
Q Consensus 55 ~i~viGDiHG~~~~---------------------l~~lL~~~~~-~~~~~~vflGD~vDrG~~s-----~e~l~~l~~l 107 (313)
.|+-+.|+||++.. +..+++.... .++..++..||.+...+.+ ...++++.++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 36677888887533 3444554432 2334455689998755422 3345555555
Q ss_pred hhhCCCcEEEEcCCchh
Q 021357 108 KVRYPQRITILRGNHES 124 (313)
Q Consensus 108 ~~~~p~~v~~lrGNHE~ 124 (313)
.. -.+..||||.
T Consensus 82 g~-----Da~~lGNHEF 93 (550)
T TIGR01530 82 GF-----DFFTLGNHEF 93 (550)
T ss_pred CC-----CEEEeccccc
Confidence 42 4578999995
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=81.24 E-value=2.5 Score=40.80 Aligned_cols=71 Identities=7% Similarity=-0.036 Sum_probs=41.7
Q ss_pred cCCceeEecCCCCCHHHHHH---HHHHc-CCCCCCceEEeeccccCCCCcHH------HHHHHHHhh---hhCCCcEEEE
Q 021357 52 VKSPVTICGDIHGQFHDLAE---LFQIG-GKCPDTNYLFMGDYVDRGYYSVE------TVTLLVALK---VRYPQRITIL 118 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~~l~~---lL~~~-~~~~~~~~vflGD~vDrG~~s~e------~l~~l~~l~---~~~p~~v~~l 118 (313)
-+.+.+++||-=+....-.. .+... ...+.+-+|-+||-++.|..++. ..+-++.-. .+- ..+.+
T Consensus 25 ~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~--Pwy~v 102 (394)
T PTZ00422 25 AQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQI--PFFTV 102 (394)
T ss_pred CeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCC--CeEEe
Confidence 34579999996443332222 23322 23445667779999888876543 334443221 112 38999
Q ss_pred cCCchh
Q 021357 119 RGNHES 124 (313)
Q Consensus 119 rGNHE~ 124 (313)
+||||.
T Consensus 103 LGNHDy 108 (394)
T PTZ00422 103 LGQADW 108 (394)
T ss_pred CCcccc
Confidence 999996
No 128
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=79.78 E-value=4.1 Score=37.62 Aligned_cols=73 Identities=16% Similarity=0.312 Sum_probs=47.6
Q ss_pred CCceeEecCCCCC----HHHHHHHHHHcC-CCC----CCceEEeeccccCC----CCc----HHHHHHHHH-hhhhCC--
Q 021357 53 KSPVTICGDIHGQ----FHDLAELFQIGG-KCP----DTNYLFMGDYVDRG----YYS----VETVTLLVA-LKVRYP-- 112 (313)
Q Consensus 53 ~~~i~viGDiHG~----~~~l~~lL~~~~-~~~----~~~~vflGD~vDrG----~~s----~e~l~~l~~-l~~~~p-- 112 (313)
..+++|+||+|=+ +++|.++|+... ..+ ...+|++|+++-+. ..+ .+-.+-|.. +...+|
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 4679999999964 567888888762 222 44588999997552 222 233444443 233444
Q ss_pred ---CcEEEEcCCchhh
Q 021357 113 ---QRITILRGNHESR 125 (313)
Q Consensus 113 ---~~v~~lrGNHE~~ 125 (313)
.++++|+|-.|-.
T Consensus 107 ~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 107 LEHCYLIFIPGINDPC 122 (291)
T ss_pred HhcCeEEEECCCCCCC
Confidence 4899999999964
No 129
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=79.66 E-value=1.8 Score=43.68 Aligned_cols=68 Identities=21% Similarity=0.102 Sum_probs=39.0
Q ss_pred cCCceeEecCCCCCHH----------HHHHHHHHcCC-----CCCCceEEeeccccCCCC-----cHHHHHHHHHhhhhC
Q 021357 52 VKSPVTICGDIHGQFH----------DLAELFQIGGK-----CPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRY 111 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~----------~l~~lL~~~~~-----~~~~~~vflGD~vDrG~~-----s~e~l~~l~~l~~~~ 111 (313)
....|+.+.|+||++. .+..+++.... .++.-++..||.+...+. ...+++++.++...
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D- 111 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD- 111 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC-
Confidence 3456899999999874 22344443321 233334457999864332 22345555555432
Q ss_pred CCcEEEEcCCchh
Q 021357 112 PQRITILRGNHES 124 (313)
Q Consensus 112 p~~v~~lrGNHE~ 124 (313)
+ ...||||.
T Consensus 112 ---a-~tlGNHEF 120 (551)
T PRK09558 112 ---A-MAVGNHEF 120 (551)
T ss_pred ---E-Eccccccc
Confidence 4 44599995
No 130
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=76.66 E-value=2.9 Score=44.13 Aligned_cols=68 Identities=22% Similarity=0.180 Sum_probs=40.7
Q ss_pred cCCceeEecCCCCCHHH----------------HHHHHHHcCCC-CCCceEEeeccccCCCC------------------
Q 021357 52 VKSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYY------------------ 96 (313)
Q Consensus 52 ~~~~i~viGDiHG~~~~----------------l~~lL~~~~~~-~~~~~vflGD~vDrG~~------------------ 96 (313)
...+|+...|+||++.. +..+++..... ++..+|-.||++--.+.
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 35679999999998632 33344444322 23344458998853332
Q ss_pred -cHHHHHHHHHhhhhCCCcEEEEcCCchh
Q 021357 97 -SVETVTLLVALKVRYPQRITILRGNHES 124 (313)
Q Consensus 97 -s~e~l~~l~~l~~~~p~~v~~lrGNHE~ 124 (313)
...+++++..+.. =....||||.
T Consensus 118 ~~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccCC-----CEEecccccc
Confidence 1235566666543 3578899994
No 131
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=74.59 E-value=0.16 Score=48.37 Aligned_cols=94 Identities=6% Similarity=-0.129 Sum_probs=62.2
Q ss_pred CCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCC---chhHHHHHHHHhhC
Q 021357 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN---ANIWKIFTDLFDYF 157 (313)
Q Consensus 81 ~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~l 157 (313)
.-..|++++..+++.+.+..+.+-....+.+-.+--.+++||+..... ..+....-.. -.++....+-++..
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~~~-----R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSSFK-----RRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcchh-----hhheeecccccCceEEEEeccCcCccc
Confidence 345788999999999999998888887777656667889999654221 1111111111 12344445556666
Q ss_pred CcEEEEcCcEEEecCCCCCCccc
Q 021357 158 PLTALVESEIFCLHGGLSPSIET 180 (313)
Q Consensus 158 P~~~~i~~~~~~vHgGi~p~~~~ 180 (313)
+...+.+ ++++.|++..|....
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~h 144 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSH 144 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccc
Confidence 7666644 999999999887654
No 132
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=67.31 E-value=5.6 Score=36.48 Aligned_cols=80 Identities=21% Similarity=0.257 Sum_probs=0.0
Q ss_pred CCCccccCCceeEecC--CCCCHHHHHHHHHHcCCCCC---CceEEeeccc-cCCCCcHHHHHHHHHhhhhCCC-----c
Q 021357 46 ESNVQPVKSPVTICGD--IHGQFHDLAELFQIGGKCPD---TNYLFMGDYV-DRGYYSVETVTLLVALKVRYPQ-----R 114 (313)
Q Consensus 46 e~~~~~~~~~i~viGD--iHG~~~~l~~lL~~~~~~~~---~~~vflGD~v-DrG~~s~e~l~~l~~l~~~~p~-----~ 114 (313)
+|.--.-+.+++|||| .+|.+..-+..++.....++ +-+|-+||=+ |-|..+.--=.+=.....-|-. .
T Consensus 36 ~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkp 115 (336)
T KOG2679|consen 36 DPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKP 115 (336)
T ss_pred CCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccc
Q ss_pred EEEEcCCchhh
Q 021357 115 ITILRGNHESR 125 (313)
Q Consensus 115 v~~lrGNHE~~ 125 (313)
-+.+.||||..
T Consensus 116 Wy~vlGNHDyr 126 (336)
T KOG2679|consen 116 WYSVLGNHDYR 126 (336)
T ss_pred hhhhccCcccc
No 133
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=63.41 E-value=15 Score=32.55 Aligned_cols=36 Identities=19% Similarity=0.322 Sum_probs=26.1
Q ss_pred HHHhCCceEEEeeccccccceEEecCCeEEEEecCCCC
Q 021357 232 FNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 269 (313)
Q Consensus 232 ~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~ 269 (313)
.+-..|+++||.||+++..+++. +++++| ++|-.|+
T Consensus 202 ~l~~~G~D~IiG~H~Hv~q~~E~-~~~~~I-~YSlGNf 237 (239)
T cd07381 202 ALIDAGADLVIGHHPHVLQGIEI-YKGKLI-FYSLGNF 237 (239)
T ss_pred HHHHCCCCEEEcCCCCcCCCeEE-ECCEEE-EEcCCCc
Confidence 33446999999999999999987 455544 3665454
No 134
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=60.79 E-value=29 Score=31.14 Aligned_cols=88 Identities=22% Similarity=0.298 Sum_probs=46.3
Q ss_pred CceEEeeccc-cCCC---CcHHHHHHHHHhhhh-------CCCcEEEEcCCchhhhhHhhhCChHHHHHHhCCch-hHHH
Q 021357 82 TNYLFMGDYV-DRGY---YSVETVTLLVALKVR-------YPQRITILRGNHESRQITQVYGFYDECLRKYGNAN-IWKI 149 (313)
Q Consensus 82 ~~~vflGD~v-DrG~---~s~e~l~~l~~l~~~-------~p~~v~~lrGNHE~~~~~~~~~~~~e~~~~~~~~~-~~~~ 149 (313)
+-.+||||-. ||-. ...-++.+|.++... -.++|++|.||||.- .++.| ..++.... ....
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein-~ngny------~arlanhkls~gD 158 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEIN-FNGNY------MARLANHKLSAGD 158 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceec-cCchH------HHHHhhCCCCccc
Confidence 3467888864 3311 112356666665531 235899999999964 22222 11221111 1111
Q ss_pred HHHHHhhCCcEEEEc-CcEEEecCCCCC
Q 021357 150 FTDLFDYFPLTALVE-SEIFCLHGGLSP 176 (313)
Q Consensus 150 ~~~~~~~lP~~~~i~-~~~~~vHgGi~p 176 (313)
--+.++.+|+...-. .+++-.|-||-.
T Consensus 159 TYnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 159 TYNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred hhhccccccccccCcchhhhhcccCcee
Confidence 224566777664432 368888988853
No 135
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=57.89 E-value=29 Score=25.64 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=44.9
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCC--CCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCC
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGN 121 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~--~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGN 121 (313)
..+.+|=|---+.+++..+++.+.. +....++++|++-|.|..+.+....+.++...+...+++...|
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 3467788866688888888887642 3345567799999988888776666777666655665444444
No 136
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=52.60 E-value=30 Score=30.71 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=25.8
Q ss_pred HHhCCceEEEeeccccccceEEecCCeEEEEecCCCC
Q 021357 233 NHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 269 (313)
Q Consensus 233 l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~ 269 (313)
+-..|+++||.||+++..+++.. ++++| +.|-.|+
T Consensus 201 l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 201 LIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 33369999999999999998864 56655 4665444
No 137
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.78 E-value=30 Score=32.56 Aligned_cols=58 Identities=28% Similarity=0.438 Sum_probs=38.0
Q ss_pred hhCCCccccCCceeEecCCC-CCHHHHHHHHHHcCCCCCCceEE-eecccc--CCCCcHHHHHHHHHhhh
Q 021357 44 MEESNVQPVKSPVTICGDIH-GQFHDLAELFQIGGKCPDTNYLF-MGDYVD--RGYYSVETVTLLVALKV 109 (313)
Q Consensus 44 ~~e~~~~~~~~~i~viGDiH-G~~~~l~~lL~~~~~~~~~~~vf-lGD~vD--rG~~s~e~l~~l~~l~~ 109 (313)
+.-|..+|....+.++||.| ||+.++.. .+..++| +-|+=. -|+....++++..+|..
T Consensus 47 ~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 47 KTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred hcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 44455678888999999999 67777643 1333555 666621 25666777777776653
No 138
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=45.90 E-value=1.1e+02 Score=25.54 Aligned_cols=53 Identities=23% Similarity=0.339 Sum_probs=38.8
Q ss_pred eEecCCCCCHHHHHHHHHH-cCC------------CCCCceEEeeccccCCCCcHHHHHHHHHhhh
Q 021357 57 TICGDIHGQFHDLAELFQI-GGK------------CPDTNYLFMGDYVDRGYYSVETVTLLVALKV 109 (313)
Q Consensus 57 ~viGDiHG~~~~l~~lL~~-~~~------------~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~ 109 (313)
++.+=.+||...+.+.+.. ++. .+.-++||+|=-+|+|.-+-++.++|..|+-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~~ 67 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLKG 67 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHccC
Confidence 4555577888877554432 222 2345799999999999999999999999763
No 139
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=42.51 E-value=1.4e+02 Score=29.19 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=47.2
Q ss_pred CceeEecCCCC-CHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhC-CCcEEEEcC
Q 021357 54 SPVTICGDIHG-QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-PQRITILRG 120 (313)
Q Consensus 54 ~~i~viGDiHG-~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~-p~~v~~lrG 120 (313)
..+.+|=|-|+ +.+++.++|+.+...+..+++.+||+..-|+.+.+.-.-+-+.-... .+.++ +-|
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 45788999666 57888888887754444568889999999999988776666544433 34454 446
No 140
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=38.36 E-value=41 Score=30.52 Aligned_cols=40 Identities=30% Similarity=0.351 Sum_probs=27.9
Q ss_pred ceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 83 ~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
+++|+||+|.+.- -..+...|.+++.+++..+++. |-|..
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 4789999998643 2356777888888887556555 55553
No 141
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=37.25 E-value=1.2e+02 Score=23.29 Aligned_cols=42 Identities=21% Similarity=0.567 Sum_probs=28.3
Q ss_pred HHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEE
Q 021357 68 DLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (313)
Q Consensus 68 ~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~l 118 (313)
.+.++++ .-|+.++|++||= |....|+..-+ ..++|++|..+
T Consensus 54 ~i~~i~~---~fP~~kfiLIGDs---gq~DpeiY~~i---a~~~P~~i~ai 95 (100)
T PF09949_consen 54 NIERILR---DFPERKFILIGDS---GQHDPEIYAEI---ARRFPGRILAI 95 (100)
T ss_pred HHHHHHH---HCCCCcEEEEeeC---CCcCHHHHHHH---HHHCCCCEEEE
Confidence 4455554 4567889999994 66667777655 44688877543
No 142
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=36.72 E-value=70 Score=28.54 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=26.6
Q ss_pred HHHhCCceEEEeeccccccceEEecCCeEEEEecCCCC
Q 021357 232 FNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 269 (313)
Q Consensus 232 ~l~~~~~~~iVrGHt~~~~G~~~~~~~~~iti~S~~~~ 269 (313)
.+-..|+++||.+|.|+..|++.. ++++|. +|-.|+
T Consensus 211 ~lidaGaDiIiG~HpHv~q~~E~y-~~~~I~-YSLGNf 246 (250)
T PF09587_consen 211 ALIDAGADIIIGHHPHVIQPVEIY-KGKPIF-YSLGNF 246 (250)
T ss_pred HHHHcCCCEEEeCCCCcccceEEE-CCEEEE-EeCccc
Confidence 333479999999999999999975 565543 665454
No 143
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=35.68 E-value=17 Score=35.76 Aligned_cols=71 Identities=14% Similarity=0.164 Sum_probs=43.3
Q ss_pred HHHHHHHHHhCCce----EEEeeccccccc--e-EEecCCeEEEEecCCCCCCCC-CCcEEEEEEcCCCceEEEEeecC
Q 021357 226 QDISEQFNHTNNLK----LIARAHQLVMDG--F-NWAHEQKVVTIFSAPNYCYRC-GNMASILEVDDCRSHTFIQFEPA 296 (313)
Q Consensus 226 ~~~~~~~l~~~~~~----~iVrGHt~~~~G--~-~~~~~~~~iti~S~~~~~~~~-~n~~avl~i~~~~~~~~~~~~~~ 296 (313)
++...+.|+.+|++ .||.||||+..+ - -+-++|+++-|+.+-+-.+.. ..-|++-.+-.....+.+...+.
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAYqs~TgiAGYTllYNSfGmqLvsHq~F 593 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAYQSTTGIAGYTLLYNSFGMQLVSHQPF 593 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhhhcccccceeEeeecchhhhHhhcCcc
Confidence 45678888888877 899999999643 2 223489999998653322221 12345555555555554444443
No 144
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=35.21 E-value=51 Score=30.15 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=26.4
Q ss_pred ceEEeeccccCCCCcHH-HHHHHHHhhhhCCCcEEEEcCCchhh
Q 021357 83 NYLFMGDYVDRGYYSVE-TVTLLVALKVRYPQRITILRGNHESR 125 (313)
Q Consensus 83 ~~vflGD~vDrG~~s~e-~l~~l~~l~~~~p~~v~~lrGNHE~~ 125 (313)
+++|+||++.+ ...+ +-..|-+++.+++..+++. |-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999954 2233 4567788888877555555 66665
No 145
>PF06569 DUF1128: Protein of unknown function (DUF1128); InterPro: IPR009507 This family consists of several short, hypothetical bacterial proteins of unknown function.
Probab=34.12 E-value=77 Score=22.91 Aligned_cols=38 Identities=18% Similarity=0.351 Sum_probs=30.3
Q ss_pred CCCCCCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q 021357 5 SLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEI 42 (313)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~ 42 (313)
..+..-++++..+-+-+++...|+.+|+..|.++...+
T Consensus 32 ~f~~~~yedl~diy~~V~~K~~fS~sEm~aI~~ELG~L 69 (71)
T PF06569_consen 32 DFSEEKYEDLKDIYEMVMSKDSFSPSEMQAIAEELGQL 69 (71)
T ss_pred hCChhhHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhh
Confidence 34566678888888888888889999999888876654
No 146
>PF12085 DUF3562: Protein of unknown function (DUF3562); InterPro: IPR021945 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 62 to 84 amino acids in length. This protein has two completely conserved residues (A and Y) that may be functionally important.
Probab=33.95 E-value=97 Score=22.05 Aligned_cols=42 Identities=14% Similarity=0.210 Sum_probs=36.7
Q ss_pred CCcccHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcc
Q 021357 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 50 (313)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~e~~~~ 50 (313)
|.++++++.|+++-.....+++.+..++++....|..+..+.
T Consensus 1 M~~~~~~e~i~~iA~~t~~P~e~V~~my~dt~~~l~~~ARV~ 42 (66)
T PF12085_consen 1 MAQDNVDEVIRSIAEETGTPAETVRRMYDDTMRELSSGARVH 42 (66)
T ss_pred CCcccHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcCCchh
Confidence 467888999999988888999999999999999998887764
No 147
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=33.65 E-value=1.4e+02 Score=28.73 Aligned_cols=68 Identities=18% Similarity=0.244 Sum_probs=44.9
Q ss_pred CceeEecCCCC-CHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCC-CcEEEEcCCc
Q 021357 54 SPVTICGDIHG-QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP-QRITILRGNH 122 (313)
Q Consensus 54 ~~i~viGDiHG-~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p-~~v~~lrGNH 122 (313)
..+.+|=|-++ +.+++.++|+.+...+...++++|++..-|+.+.+.-..+-+...... +.+ ++-|..
T Consensus 296 ~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~v-i~~g~~ 365 (417)
T TIGR01143 296 NGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLV-FLVGEE 365 (417)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEE-EEECHH
Confidence 45788888654 888999999877643345677899998778877765555554443433 444 444543
No 148
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=33.27 E-value=1.8e+02 Score=29.15 Aligned_cols=58 Identities=12% Similarity=0.011 Sum_probs=40.5
Q ss_pred CHHHHHHHHHhC-CceEEEeeccccccceEEe------cCCeEEEEecCCCCCCCCCCcEEEEEEcC
Q 021357 225 GQDISEQFNHTN-NLKLIARAHQLVMDGFNWA------HEQKVVTIFSAPNYCYRCGNMASILEVDD 284 (313)
Q Consensus 225 g~~~~~~~l~~~-~~~~iVrGHt~~~~G~~~~------~~~~~iti~S~~~~~~~~~n~~avl~i~~ 284 (313)
+.+.+.+.++++ +++.++.||.|...=.... -+..++-|.|++.. .+....-+++|-.
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlv--dfPq~~Ri~Ei~~ 431 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHI--DFPQQGRIIELAD 431 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccc--cCCCCceEEEEEe
Confidence 456788888887 8999999999976421111 12368888888654 3466778888843
No 149
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=33.17 E-value=3.1e+02 Score=23.49 Aligned_cols=75 Identities=23% Similarity=0.263 Sum_probs=52.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCHHHHHHHHHHcCCCC-------------------------
Q 021357 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCP------------------------- 80 (313)
Q Consensus 26 ~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~------------------------- 80 (313)
.++++++.+-+.+..+.+.++-.= ...++||=++|++.-+-.++..+.++.
T Consensus 11 Lisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kD 86 (178)
T COG0634 11 LISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKD 86 (178)
T ss_pred eeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecc
Confidence 478899988887777776655332 457899999999998877777654321
Q ss_pred ------CCceEEeeccccCCCCcHHHHHHH
Q 021357 81 ------DTNYLFMGDYVDRGYYSVETVTLL 104 (313)
Q Consensus 81 ------~~~~vflGD~vDrG~~s~e~l~~l 104 (313)
..+++++=|++|-|--=-.+.+++
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l 116 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLL 116 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHH
Confidence 234788999999876333344433
No 150
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.13 E-value=1.6e+02 Score=23.63 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCCCCCCceEEeeccccCCCCc-----HHHHHHHHHhhhhCCCcEEE---EcCCchhh
Q 021357 66 FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITI---LRGNHESR 125 (313)
Q Consensus 66 ~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s-----~e~l~~l~~l~~~~p~~v~~---lrGNHE~~ 125 (313)
++.|.+.++..+....-.++|+|+-.|++-+| +...-.+.+--..+|..+++ --||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 67888888888776666677999998886543 44333343322356766554 45887764
No 151
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=30.43 E-value=4.9e+02 Score=25.83 Aligned_cols=116 Identities=14% Similarity=0.129 Sum_probs=67.9
Q ss_pred CCCCCCCCcccHHHHHHHHhcCCCC-----CHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCCCH----HHHHHHH
Q 021357 3 ANSLSTDTTTDLDEQISQLMQCKPL-----SEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQF----HDLAELF 73 (313)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG~~----~~l~~lL 73 (313)
|++++.-|.+.-+.-.+.+.+..-+ ........++++.+. ..+..+++++|+|=+. ++|.++|
T Consensus 235 V~~lg~PP~E~~~~tr~~~gN~n~~Gg~~~~~~k~sA~L~~lE~~--------~~d~~fVfLSdV~LD~~~vm~aL~kif 306 (525)
T KOG3818|consen 235 VNELGFPPVERREVTRKELGNLNWLGGDSKIAFKCSARLRSLEAE--------NTDTSFVFLSDVFLDDKKVMEALRKIF 306 (525)
T ss_pred EeeccCCCCCcchhHHHHhccCcccCCcchhhhHHHHHHHHHHHh--------CcCceEEEEehhccccHHHHHHHHHHH
Confidence 4566677777777777777654322 222233333332222 1244577889998764 4677788
Q ss_pred HHcCCCCCCceEEeeccccC--CCCcHHH----HHHHHHhhhhC-----CCcEEEEcCCchhhh
Q 021357 74 QIGGKCPDTNYLFMGDYVDR--GYYSVET----VTLLVALKVRY-----PQRITILRGNHESRQ 126 (313)
Q Consensus 74 ~~~~~~~~~~~vflGD~vDr--G~~s~e~----l~~l~~l~~~~-----p~~v~~lrGNHE~~~ 126 (313)
+.....|...+|+.|.+.-+ +..+... +..|...-..+ ..++++++|--|-..
T Consensus 307 qgy~~~pP~~iIlcG~FtS~p~~~~s~~~~k~~f~~LA~~l~~~~~~~ekT~fIFVPGP~Dp~~ 370 (525)
T KOG3818|consen 307 QGYKDAPPTAIILCGSFTSSPRQTSSSDQLKDGFRWLAAQLTCFRKDYEKTQFIFVPGPNDPWV 370 (525)
T ss_pred hhccCCCCeEEEEeccccccccccchHHHHHHHHHHHHhhccccccccccceEEEecCCCCCCc
Confidence 87777788889999999654 4433222 22222221111 136889999877653
No 152
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=29.53 E-value=93 Score=27.87 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=39.2
Q ss_pred ceeEecCCCCC--H--HHHHHHHH-HcCCCCCCceEEeeccc-cCCCCcH------HHHHHHHH-hhhhCCCcEEEEcCC
Q 021357 55 PVTICGDIHGQ--F--HDLAELFQ-IGGKCPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYPQRITILRGN 121 (313)
Q Consensus 55 ~i~viGDiHG~--~--~~l~~lL~-~~~~~~~~~~vflGD~v-DrG~~s~------e~l~~l~~-l~~~~p~~v~~lrGN 121 (313)
+.+++||.=.. . ..+.+.+. .+...+.+-+|++||++ +-|..+. +.+..++. +.... .++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~--P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQV--PWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcC--CeEEecCC
Confidence 57899998764 1 23333333 33334556788999997 5553211 22222222 22223 39999999
Q ss_pred chhh
Q 021357 122 HESR 125 (313)
Q Consensus 122 HE~~ 125 (313)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9975
No 153
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=29.03 E-value=82 Score=28.57 Aligned_cols=13 Identities=15% Similarity=0.222 Sum_probs=9.3
Q ss_pred ceEEEeecccccc
Q 021357 238 LKLIARAHQLVMD 250 (313)
Q Consensus 238 ~~~iVrGHt~~~~ 250 (313)
+..+|-.||+++.
T Consensus 169 vsavvGTHTHV~T 181 (266)
T COG1692 169 VSAVVGTHTHVPT 181 (266)
T ss_pred EEEEEeccCcccc
Confidence 4677778887764
No 154
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=28.91 E-value=1.3e+02 Score=30.74 Aligned_cols=61 Identities=20% Similarity=0.213 Sum_probs=35.7
Q ss_pred HHHHHHHcCCCC--CCceEEeeccc--cCCCCcHH----HHHHHHHhh-hhCCC-cEEEEcCCchhhhhHh
Q 021357 69 LAELFQIGGKCP--DTNYLFMGDYV--DRGYYSVE----TVTLLVALK-VRYPQ-RITILRGNHESRQITQ 129 (313)
Q Consensus 69 l~~lL~~~~~~~--~~~~vflGD~v--DrG~~s~e----~l~~l~~l~-~~~p~-~v~~lrGNHE~~~~~~ 129 (313)
+..+|+.++... -|-++..||.+ |+++.+.+ ++..+.++. .-+|+ -|+...||||..-.+.
T Consensus 197 ies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~ 267 (577)
T KOG3770|consen 197 IESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL 267 (577)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh
Confidence 344555544322 34455699997 45555433 333333333 33554 5889999999876664
No 155
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=27.46 E-value=2.7e+02 Score=27.60 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCceeEecC-CCCCHHHHHHHHHHcCCCCCCc-eEEeeccccCCCCcHHHHHHH
Q 021357 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGD-IHGQFHDLAELFQIGGKCPDTN-YLFMGDYVDRGYYSVETVTLL 104 (313)
Q Consensus 27 ~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGD-iHG~~~~l~~lL~~~~~~~~~~-~vflGD~vDrG~~s~e~l~~l 104 (313)
++.+++..-+.+.+.+=.+.. .......+.+|-| --++.+.+...++.....+... ++.|||+..=|..+.++-.-+
T Consensus 300 ~~~e~i~~~L~~~~~~~gR~~-~~~~~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v 378 (451)
T COG0770 300 LDLEEIAAGLKELKPVKGRLE-VILLANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEV 378 (451)
T ss_pred CCHHHHHHHHHhcCCCCccce-eEecCCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHH
Confidence 555555544444333321111 1112334455555 5678889988888776655555 789999999999998877766
Q ss_pred HHhhhhCCCcEEEEcCC
Q 021357 105 VALKVRYPQRITILRGN 121 (313)
Q Consensus 105 ~~l~~~~p~~v~~lrGN 121 (313)
-+.-....-..+++-|.
T Consensus 379 ~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 379 GEYAVEAGIDLVFLVGE 395 (451)
T ss_pred HHHHHhcCceEEEEEcc
Confidence 66555432246777787
No 156
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=27.26 E-value=1.2e+02 Score=23.48 Aligned_cols=64 Identities=19% Similarity=0.243 Sum_probs=40.3
Q ss_pred ceeEecCCCCCHHHHHHHHHHcCCCC---------------CCc--eEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEE
Q 021357 55 PVTICGDIHGQFHDLAELFQIGGKCP---------------DTN--YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 117 (313)
Q Consensus 55 ~i~viGDiHG~~~~l~~lL~~~~~~~---------------~~~--~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~ 117 (313)
||.||.|=-.+...|..+|+-+|... ... +|.+|+.- .....+..+...+|.-=++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 45666666556666777776555322 112 34455542 6666777777777776688
Q ss_pred EcCCchhh
Q 021357 118 LRGNHESR 125 (313)
Q Consensus 118 lrGNHE~~ 125 (313)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 88988876
No 157
>PLN02965 Probable pheophorbidase
Probab=25.11 E-value=2.7e+02 Score=24.32 Aligned_cols=21 Identities=14% Similarity=-0.017 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCc--eEEEeeccc
Q 021357 227 DISEQFNHTNNL--KLIARAHQL 247 (313)
Q Consensus 227 ~~~~~~l~~~~~--~~iVrGHt~ 247 (313)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 347888888864 899999995
No 158
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=24.17 E-value=6.3e+02 Score=24.65 Aligned_cols=91 Identities=23% Similarity=0.307 Sum_probs=59.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCceeEecCCCC-------CHHHHHHH---HHHcCCCCCCceEEe--------
Q 021357 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHG-------QFHDLAEL---FQIGGKCPDTNYLFM-------- 87 (313)
Q Consensus 26 ~~~~~~~~~l~~~a~~~~~~e~~~~~~~~~i~viGDiHG-------~~~~l~~l---L~~~~~~~~~~~vfl-------- 87 (313)
+.-...+.+.+....+++..-..++...+....+||==| +-++|.-+ .+.+++.+...+.+-
T Consensus 168 p~ga~sf~ealr~~~ev~h~lk~~l~~~g~~t~vGDEGgfAP~l~~~eeald~i~~Aie~agy~~g~~i~~alD~Aasef 247 (423)
T COG0148 168 PVGAESFKEALRAGAEVFHHLKKLLKEKGLSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGEDIALALDVAASEF 247 (423)
T ss_pred ecChHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCcccCCCCCccHHHHHHHHHHHHHhCCCCCcceeeeehhhhhhh
Confidence 355678888888888888888887776666677888655 34445444 456666554322211
Q ss_pred ---eccccC--CCCcHHHHHHHHHhhhhCCCcEEEE
Q 021357 88 ---GDYVDR--GYYSVETVTLLVALKVRYPQRITIL 118 (313)
Q Consensus 88 ---GD~vDr--G~~s~e~l~~l~~l~~~~p~~v~~l 118 (313)
|.|+=. ...+.|.++++..|..+|| ++.+
T Consensus 248 y~~~~Y~~~~~~~~~~e~i~~~~~Lv~~Yp--ivsi 281 (423)
T COG0148 248 YKDGKYVLEGESLTSEELIEYYLELVKKYP--IVSI 281 (423)
T ss_pred ccCCeeeecCcccCHHHHHHHHHHHHHhCC--EEEE
Confidence 112211 2356789999999999998 7655
No 159
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=24.05 E-value=1.9e+02 Score=26.23 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=36.3
Q ss_pred CceeEecCCCCCHH--HHHHHHHHcCCCCC-CceEEeeccccCCCC-cHHHHHHHHHhhhhCCCcEEEEcCCchh
Q 021357 54 SPVTICGDIHGQFH--DLAELFQIGGKCPD-TNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRGNHES 124 (313)
Q Consensus 54 ~~i~viGDiHG~~~--~l~~lL~~~~~~~~-~~~vflGD~vDrG~~-s~e~l~~l~~l~~~~p~~v~~lrGNHE~ 124 (313)
||+.++||+-|... .+..-|..+...-+ +.++.-|.-..-|.. +.+....+.+... =++=+|||-.
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G~-----dviT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAGA-----DVITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhCC-----CEEecccccc
Confidence 57888888888654 44555544433222 334445665544442 4556665555432 2466788864
No 160
>TIGR00758 UDG_fam4 uracil-DNA glycosylase, family 4. This well-conserved family of proteins is about 200 residues in length and homologous to the N-terminus of the DNA polymerase of phage SPO1 of Bacillus subtilis. The member from Thermus thermophilus HB8 is known to act as uracil-DNA glycosylase, an enzyme of DNA base excision repair. Its appearance as a domain of phage DNA polymerases could be consistent with uracil-DNA glycosylase activity.
Probab=23.72 E-value=4.4e+02 Score=22.06 Aligned_cols=73 Identities=18% Similarity=0.229 Sum_probs=44.4
Q ss_pred ccCCceeEecCCCCCH-------------HHHHHHHHHcCCCCCCceEEeeccc------cCCCCcHH---HHHHHHHhh
Q 021357 51 PVKSPVTICGDIHGQF-------------HDLAELFQIGGKCPDTNYLFMGDYV------DRGYYSVE---TVTLLVALK 108 (313)
Q Consensus 51 ~~~~~i~viGDiHG~~-------------~~l~~lL~~~~~~~~~~~vflGD~v------DrG~~s~e---~l~~l~~l~ 108 (313)
+...+|++||+-=|.- .-|.++|+.+|..+.+.|+- .++ +|-|...| |..++.+.-
T Consensus 19 ~~~A~im~VgeaPg~~e~~~g~pf~g~sG~~L~~~l~~~gl~~~~vy~t--~~~kc~P~~~r~P~~~Ei~~c~~~l~~eI 96 (173)
T TIGR00758 19 NPDANIMFVGEAPGREEDRKGRPFVGRAGKLLDEMLAAIGLSRENVYIT--NVVKCRPPNNRDPTPEEVEACAPYLVKQI 96 (173)
T ss_pred CCCCCEEEEeCCCCccccccCCCCcChHHHHHHHHHHHcCCCcccEEEe--ccccccCCCCCCcCHHHHHHHHHHHHHHH
Confidence 3467899998655422 24677888888877654442 222 45555444 555555543
Q ss_pred hhCCCcEEEEcCCchhh
Q 021357 109 VRYPQRITILRGNHESR 125 (313)
Q Consensus 109 ~~~p~~v~~lrGNHE~~ 125 (313)
..-.++++++.|+--..
T Consensus 97 ~~v~P~~Iv~lG~~a~~ 113 (173)
T TIGR00758 97 ELIRPKVIICLGRTAAQ 113 (173)
T ss_pred HhcCCCEEEEECHHHHH
Confidence 33334799999996544
No 161
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=22.15 E-value=1.4e+02 Score=22.46 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=15.6
Q ss_pred CCceeEecCCC-CCHHHHHHHHH
Q 021357 53 KSPVTICGDIH-GQFHDLAELFQ 74 (313)
Q Consensus 53 ~~~i~viGDiH-G~~~~l~~lL~ 74 (313)
..|-++|||-| |.+++|.++-+
T Consensus 60 tvPQIFi~~~~iGg~ddl~~l~e 82 (92)
T cd03030 60 LPPQIFNGDEYCGDYEAFFEAKE 82 (92)
T ss_pred CCCEEEECCEEeeCHHHHHHHHh
Confidence 34557788888 88888877654
No 162
>PLN02533 probable purple acid phosphatase
Probab=21.72 E-value=81 Score=30.86 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=20.7
Q ss_pred HHHHHHHHHhCCceEEEeeccccc
Q 021357 226 QDISEQFNHTNNLKLIARAHQLVM 249 (313)
Q Consensus 226 ~~~~~~~l~~~~~~~iVrGHt~~~ 249 (313)
.+.++.++.++++++++.||.|.-
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~Y 334 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAY 334 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecc
Confidence 356788899999999999999963
No 163
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=21.63 E-value=3.1e+02 Score=22.94 Aligned_cols=67 Identities=13% Similarity=0.084 Sum_probs=41.8
Q ss_pred CceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCch
Q 021357 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (313)
Q Consensus 54 ~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE 123 (313)
.++++++. |....+...++..+....-..++..|-+....-..+++..+.+.....|.+++++ |.+.
T Consensus 109 ~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v-gD~~ 175 (198)
T TIGR01428 109 YRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV-ASNP 175 (198)
T ss_pred CeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE-eCCH
Confidence 57899987 5667778888888875444456666666665555666666554333346666544 5444
No 164
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.96 E-value=3.1e+02 Score=24.84 Aligned_cols=80 Identities=18% Similarity=0.164 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhCCC--ccccCCceeEecCCCCCHHHHHHHHHHcCCCCCCceEEeeccccCCCCcHHHHHHHHHhhhhC
Q 021357 34 ALCEKAKEILMEESN--VQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY 111 (313)
Q Consensus 34 ~l~~~a~~~~~~e~~--~~~~~~~i~viGDiHG~~~~l~~lL~~~~~~~~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~ 111 (313)
+|+++.-++|.+-.. +-.+-..|-+||- |.-..+...+.....++.. .+++||-|. .++.+..+....
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGg--g~ka~i~e~~~ele~~d~s-a~~VGDSIt----Dv~ml~~~rgrG--- 229 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGG--GEKAKIMEGYCELEGIDFS-AVVVGDSIT----DVKMLEAARGRG--- 229 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccC--cchhHHHHHHHhhcCCCcc-eeEecCccc----chHHHHHhhccC---
Confidence 445555555544222 1122345667776 7777777777666665555 888999765 355666555543
Q ss_pred CCcEEEEcCCchh
Q 021357 112 PQRITILRGNHES 124 (313)
Q Consensus 112 p~~v~~lrGNHE~ 124 (313)
+-.+...|||=.
T Consensus 230 -glAvaFNGNeYa 241 (315)
T COG4030 230 -GLAVAFNGNEYA 241 (315)
T ss_pred -ceEEEecCCccc
Confidence 346778899753
No 165
>PF04723 GRDA: Glycine reductase complex selenoprotein A; InterPro: IPR006812 Found in clostridia, this protein contains one active site selenocysteine and catalyses the reductive deamination of glycine, which is coupled to the esterification of orthophosphate resulting in the formation of ATP []. A member of this family may also exist in Treponema denticola [].; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=20.85 E-value=3e+02 Score=22.63 Aligned_cols=69 Identities=22% Similarity=0.350 Sum_probs=50.2
Q ss_pred CCceeEecCCCCCHH-HHHHHHHHcCCCCCCceEE--eeccc--cCCCCcHHHHHHHHHhhhhCC-CcEEEEcCCchhh
Q 021357 53 KSPVTICGDIHGQFH-DLAELFQIGGKCPDTNYLF--MGDYV--DRGYYSVETVTLLVALKVRYP-QRITILRGNHESR 125 (313)
Q Consensus 53 ~~~i~viGDiHG~~~-~l~~lL~~~~~~~~~~~vf--lGD~v--DrG~~s~e~l~~l~~l~~~~p-~~v~~lrGNHE~~ 125 (313)
..++++|||--|=-. ++...++..|- .++| .--+| .-|.-.+|.-+.+..+..+|+ .+++.|.|.-|.-
T Consensus 5 gkKviiiGdRDGiPgpAie~c~~~~ga----evvfs~TeCFVctaagaMDLEnQ~rvk~~aEk~g~enlvVvlG~aeaE 79 (150)
T PF04723_consen 5 GKKVIIIGDRDGIPGPAIEECVKTAGA----EVVFSSTECFVCTAAGAMDLENQQRVKDLAEKYGAENLVVVLGAAEAE 79 (150)
T ss_pred CcEEEEEecCCCCCcHHHHHHHHhcCc----eEEEEeeeEEEecccccccHHHHHHHHHHHHhcCCccEEEEecCCChh
Confidence 457999999999654 77888887752 2333 12222 357777899999999988875 5999999998853
No 166
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional
Probab=20.53 E-value=2.9e+02 Score=29.92 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=44.9
Q ss_pred CceeEecCCCC-CHHHHHHHHHHcCCCC-CCceEEeeccccCCCCcHHHHHHHHHhhhhCCCcEEEEcCCch
Q 021357 54 SPVTICGDIHG-QFHDLAELFQIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (313)
Q Consensus 54 ~~i~viGDiHG-~~~~l~~lL~~~~~~~-~~~~vflGD~vDrG~~s~e~l~~l~~l~~~~p~~v~~lrGNHE 123 (313)
..+.+|=|-++ +.+++.++|+.+...+ ...++++|++-+.|+.+...-..+-+.........+++-|..-
T Consensus 834 ~~~~iidDsya~np~s~~aaL~~l~~~~~~~~i~VlG~~~e~g~~~~~~h~~~g~~~~~~~~~~vi~~Ge~~ 905 (958)
T PRK11929 834 CGTRIIDDTYNANPDSMRAAIDVLAELPNGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLGEAA 905 (958)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhccCCCEEEEECCchhcCcHHHHHHHHHHHHHHHcCCCEEEEECcCH
Confidence 45778889764 7888989888776433 3567889999988888766544443332222223455557544
No 167
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=20.03 E-value=38 Score=28.30 Aligned_cols=48 Identities=29% Similarity=0.549 Sum_probs=30.3
Q ss_pred cccCHHHHHHHHHhCCceEE---------EeeccccccceEEecCCeEEEEecCCCCCCCCCC
Q 021357 222 YTFGQDISEQFNHTNNLKLI---------ARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGN 275 (313)
Q Consensus 222 ~~fg~~~~~~~l~~~~~~~i---------VrGHt~~~~G~~~~~~~~~iti~S~~~~~~~~~n 275 (313)
+..+++..+.||.+-|.+.| |||+=+++..+.+.. =+.+|+||.+||.
T Consensus 20 ~~~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~------~~~~PsYC~~CGk 76 (158)
T PF10083_consen 20 YDKNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGG------HYEAPSYCHNCGK 76 (158)
T ss_pred cccCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCC------CCCCChhHHhCCC
Confidence 34455677888888776655 777766643333211 1458999988875
Done!