BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021363
(313 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255586057|ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526406|gb|EEF28690.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 478
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 246/329 (74%), Gaps = 32/329 (9%)
Query: 1 MEMNGSKREENEKMEEC-KETVVYMWGYLPGTSPEKSPILSPIPARLCGG---DSWKDVC 56
M +NG+ EE+ KMEEC K T VYM GYLPG SPEKSPILSPI + G DSWKDVC
Sbjct: 1 MAINGNGEEEDVKMEECCKVTAVYMCGYLPGISPEKSPILSPIQVPISDGGGFDSWKDVC 60
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGCGFA+A S SG LITWGS D+EGQSYLTSGKHGE PEPFPLP EASVVKAAAGWAHC
Sbjct: 61 SGGCGFAMAISGSGNLITWGSTDEEGQSYLTSGKHGEIPEPFPLPCEASVVKAAAGWAHC 120
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------- 168
VSVTE GEV+TWGW+ECVPS K+ Q+D+TGKQ+AL + S
Sbjct: 121 VSVTETGEVFTWGWKECVPSVKI---------IQRDNTGKQNALLQTEKVSSRSEGSSLT 171
Query: 169 --------DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
KR G+E+VKRR+ S +E+ E+ SGDEFFT+ P +VTL PGV+IT VAAG
Sbjct: 172 RGTVLNSDSKRTGDEIVKRRRVSPTKEDFESSPSGDEFFTVLPLMVTLAPGVRITNVAAG 231
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
GRHTL LSDMGQVWGWGYGGEGQLGLGSRIKMV +PHLIPC++ +ASGKDR L+V QG++
Sbjct: 232 GRHTLALSDMGQVWGWGYGGEGQLGLGSRIKMVSSPHLIPCIDASASGKDRSLIVHQGNL 291
Query: 281 NSSGKAGR---SYVKEIACGGRHSAVVTD 306
S +A SYVKEIACGGRHSA+VTD
Sbjct: 292 TPSAQASTFPGSYVKEIACGGRHSAIVTD 320
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 55/228 (24%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ AAG H +++++ G+V+ WG +G G S K + P
Sbjct: 225 ITNVAAGGRHTLALSDMGQVWGWG-------------YGGEGQLGLGSRIKMVSSP-HLI 270
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P D A + ++ + + P++ F PG + ++A GGRH+
Sbjct: 271 PCIDASAS----GKDRSLIVHQGNLTPSAQASTF----------PGSYVKEIACGGRHSA 316
Query: 226 ILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
I++D G + +G+G GQ G G+ R VP I + AA + G V
Sbjct: 317 IVTDTGALLTFGWGLYGQCGQGTTNDQLRPACVPALSGIKVISIAAGLWHTVCISADGHV 376
Query: 281 NSSG----------------------KAGRSYVKEIACGGRHSAVVTD 306
+ G G + K ++CG RHSAV+T+
Sbjct: 377 YTFGGNQFGQLGTDTDQTEPKQLYAPSLGSKHAKIVSCGARHSAVLTE 424
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 74/200 (37%), Gaps = 62/200 (31%)
Query: 53 KDVCGGGCGFALATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K++ GG A+ T ++G L+T WG GQ P P + V+ A
Sbjct: 306 KEIACGGRHSAIVT-DTGALLTFGWGLYGQCGQGTTNDQLR---PACVPALSGIKVISIA 361
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
AG H V ++ G VYT+G + FG G+ T+Q P
Sbjct: 362 AGLWHTVCISADGHVYTFGGNQ----------FGQLGT------------DTDQTEPKQL 399
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
A P+ G + + C G RH+ +L++
Sbjct: 400 YA-------------------PSLGSKHAKIVSC---------------GARHSAVLTED 425
Query: 231 GQVWGWGYGGEGQLGLGSRI 250
GQV+ WG+ GQLGLG I
Sbjct: 426 GQVYSWGWNKYGQLGLGDSI 445
>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 485
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/323 (61%), Positives = 228/323 (70%), Gaps = 17/323 (5%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVC 56
M+ + KM + +VYMWGYLPG P+KS +L P P RL GGDSWK+VC
Sbjct: 1 MKEENAADHNGAKMANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVC 60
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGGCGFA+A S+SGKLITWG+AD+EGQ +LTSGKHGE PE FP PTE VVKA AGWAHC
Sbjct: 61 GGGCGFAMAISDSGKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHC 120
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD------- 169
VSVTEAGEVYTWGW EC+PS K RD G KDSTGKQS EQA P D
Sbjct: 121 VSVTEAGEVYTWGWSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRM 180
Query: 170 ------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
KR GEE KRRK +S +E++E + GD+ FT PCLV PGVKI VAAGGRH
Sbjct: 181 DSQLDNKRVGEETAKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRH 240
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL LSDMGQVWGWG+GGEGQLGLG+R+KMV +PH+IPC+E AS KDR ++ Q S ++
Sbjct: 241 TLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAA 300
Query: 284 GKAGRSYVKEIACGGRHSAVVTD 306
GK +YVK IACGGRHS VVTD
Sbjct: 301 GKVLGNYVKGIACGGRHSVVVTD 323
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+V+ G RH ++L+D GQ++ WG+ GQLGLG I
Sbjct: 416 RVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSI 450
>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 472
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/310 (63%), Positives = 224/310 (72%), Gaps = 17/310 (5%)
Query: 14 MEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSES 69
M + +VYMWGYLPG P+KS +L P P RL GGDSWK+VCGGGCGFA+A S+S
Sbjct: 1 MANKIDALVYMWGYLPGALPDKSLLLLPEPVRLPSSIDGGDSWKEVCGGGCGFAMAISDS 60
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKLITWG+AD+EGQ +LTSGKHGE PE FP PTE VVKA AGWAHCVSVTEAGEVYTWG
Sbjct: 61 GKLITWGAADEEGQIFLTSGKHGEIPEAFPFPTEDLVVKAVAGWAHCVSVTEAGEVYTWG 120
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD-------------KRAGEEV 176
W EC+PS K RD G KDSTGKQS EQA P D KR GEE
Sbjct: 121 WSECIPSMKTLRDLAIGGGLLKDSTGKQSLTTAEQAGPQDSNGVDRMDSQLDNKRVGEET 180
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
KRRK +S +E++E + GD+ FT PCLV PGVKI VAAGGRHTL LSDMGQVWGW
Sbjct: 181 AKRRKINSVKEDTEISSPGDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGW 240
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G+GGEGQLGLG+R+KMV +PH+IPC+E AS KDR ++ Q S ++GK +YVK IAC
Sbjct: 241 GHGGEGQLGLGTRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAAGKVLGNYVKGIAC 300
Query: 297 GGRHSAVVTD 306
GGRHS VVTD
Sbjct: 301 GGRHSVVVTD 310
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+V+ G RH ++L+D GQ++ WG+ GQLGLG I
Sbjct: 403 RVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSI 437
>gi|356523185|ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Glycine max]
Length = 528
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/314 (64%), Positives = 229/314 (72%), Gaps = 28/314 (8%)
Query: 17 CKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKL 72
C E +VYMWGYLPG SPEKSPILSP P L GDSWKDVCGGGCGFA+A SE GKL
Sbjct: 59 CAEKMVYMWGYLPGASPEKSPILSPAPVNLSDRSLAGDSWKDVCGGGCGFAMAISEKGKL 118
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
ITWGSADDEGQSYL SGKHGE P + LPTEASVVKAAAGWAHC SV E GEVY WGW+E
Sbjct: 119 ITWGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVNEEGEVYAWGWKE 178
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSA----------------LPTEQAPPSDKRAGEEV 176
CVPS KV DF + GSFQKD GKQ + + +K+ G+EV
Sbjct: 179 CVPSGKVITDFITVGSFQKDVAGKQRSXWNFRHXTGSPQSSNTSSGSDSHHDNKKVGDEV 238
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+KRRK + +R++S++ ASGDEFFT+SP LVTL GVKIT VA GGRHTL LSD+GQVWGW
Sbjct: 239 LKRRKITFSRQDSDSQASGDEFFTVSPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGW 298
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----SYVK 292
GYGGEGQLGLGSR+KMV +PHLIPC+E +SGKD+ QGS +G G SYV
Sbjct: 299 GYGGEGQLGLGSRVKMVSSPHLIPCIE--SSGKDKSSAFHQGS--GAGAQGSNVTGSYVM 354
Query: 293 EIACGGRHSAVVTD 306
+IACGGRHS V+TD
Sbjct: 355 DIACGGRHSVVITD 368
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 62/243 (25%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+P L + + A G H +++++ G+V+ WG +G G S
Sbjct: 264 SPSLVTLASGVKITSVAVGGRHTLALSDVGQVWGWG-------------YGGEGQLGLGS 310
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
K + P P + +G++ K+S+ + S A G G
Sbjct: 311 RVKMVSSP--HLIPCIESSGKD-----KSSAFHQGSGAGAQGSNV-----------TGSY 352
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASG 268
+ +A GGRH+++++D G + +G+G GQ G G+ + P L+P L E A+G
Sbjct: 353 VMDIACGGRHSVVITDAGALLTFGWGLYGQCGQGNNADQL-RPTLVPSLLGTRVEKIAAG 411
Query: 269 KDRPLLVR-QGSV-----NSSGKAG-------------------RSYVKEIACGGRHSAV 303
L V G + N G+ G + ++CG RHSA+
Sbjct: 412 LWHTLCVSVNGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSIVSCGARHSAL 471
Query: 304 VTD 306
+TD
Sbjct: 472 LTD 474
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 34/165 (20%)
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWR---EC-------------VPSAKVTRDFGS 145
T + V+ A G H V +T+AG + T+GW +C VPS TR
Sbjct: 349 TGSYVMDIACGGRHSVVITDAGALLTFGWGLYGQCGQGNNADQLRPTLVPSLLGTR---- 404
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
+K + G L G + + S E S F +
Sbjct: 405 ---VEKIAAGLWHTLCVSVNGQIYAFGGNQFGQLGTGSDQPETSPRQLDASRFENKHSSI 461
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
V+ G RH+ +L+D G ++ WG+ GQLGLG +
Sbjct: 462 VS-----------CGARHSALLTDDGHLFTWGWNKYGQLGLGDSV 495
>gi|356566559|ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 525
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/309 (65%), Positives = 228/309 (73%), Gaps = 25/309 (8%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKLIT 74
E +VYMWGYLPG SPEKSPILSP P L DSWKDVCGGGCGFA+ SE GKLIT
Sbjct: 61 EKMVYMWGYLPGASPEKSPILSPAPVTLSDPSLAVDSWKDVCGGGCGFAMVISEKGKLIT 120
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGSADDEGQSYL SGKHGE P + LPTEASVVKAAAGWAHC SVTE GEVY WGW+ECV
Sbjct: 121 WGSADDEGQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGWKECV 180
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------------SDKRAGEEVVKRRK 181
PS KV DF + GS QKD GKQS+ EQ P +K+ G+EVVKRRK
Sbjct: 181 PSGKVITDFITVGSLQKDIAGKQSSSIAEQGSPQSSNTSSGSDSHHDNKKVGDEVVKRRK 240
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
+ +R++S++ ASGDEFFT+SP LVTL GVKIT V+ GGRHTL LSD+GQVWGWGYGGE
Sbjct: 241 ITFSRQDSDSQASGDEFFTVSPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWGYGGE 300
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR----SYVKEIACG 297
GQLGLGSR+KMV +PHLIPC+E A GKD+ QGS +G G SYV +I+CG
Sbjct: 301 GQLGLGSRVKMVSSPHLIPCIESA--GKDKSSAFHQGS--GAGAQGSNVTGSYVMDISCG 356
Query: 298 GRHSAVVTD 306
GRHS V+TD
Sbjct: 357 GRHSVVITD 365
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 96/243 (39%), Gaps = 62/243 (25%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+P L + + G H +++++ G+V+ WG +G G S
Sbjct: 261 SPSLVTLGNGVKITSVSLGGRHTLALSDVGQVWGWG-------------YGGEGQLGLGS 307
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
K + P P + AG++ K+S+ + S A G G
Sbjct: 308 RVKMVSSP--HLIPCIESAGKD-----KSSAFHQGSGAGAQGSNV-----------TGSY 349
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASG 268
+ ++ GGRH+++++D G + +G+G GQ G G+ + + P L+P L E A+G
Sbjct: 350 VMDISCGGRHSVVITDAGALLTFGWGLYGQCGQGNNVDQL-RPTLVPSLLGTRVEKIAAG 408
Query: 269 KDRPLLVR-QGSV-----NSSGKAG-------------------RSYVKEIACGGRHSAV 303
L V G + N G+ G + ++CG RHSA+
Sbjct: 409 LWHTLCVTVNGQIYAFGGNQFGQLGTGTDQPETSPRQLDASRFENKHSSIVSCGARHSAL 468
Query: 304 VTD 306
+TD
Sbjct: 469 LTD 471
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 65/199 (32%)
Query: 56 CGGGCGFALATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAA 111
CGG ++ +++G L+T WG GQ G + + P +P+ V K AA
Sbjct: 355 CGGR--HSVVITDAGALLTFGWGLYGQCGQ-----GNNVDQLRPTLVPSLLGTRVEKIAA 407
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H + VT G++Y +G + FG G+ T+Q S
Sbjct: 408 GLWHTLCVTVNGQIYAFGGNQ----------FGQLGT------------GTDQPETSP-- 443
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
R+ ++R E+++ + V+ G RH+ +L+D G
Sbjct: 444 --------RQLDASRFENKHS----------------------SIVSCGARHSALLTDDG 473
Query: 232 QVWGWGYGGEGQLGLGSRI 250
++ WG+ GQLGLG +
Sbjct: 474 HLFTWGWNKYGQLGLGDSV 492
>gi|359482088|ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
1 [Vitis vinifera]
Length = 514
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/329 (63%), Positives = 244/329 (74%), Gaps = 28/329 (8%)
Query: 2 EMNGSKRE-ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVC 56
+ +GS+ E E KMEE +VVYMWGYLPG S + SP+LSP+P L DSWKDVC
Sbjct: 17 DCDGSEGEGEAMKMEE---SVVYMWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVC 73
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GGGCGFA+A SESGKLITWGS DD GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHC
Sbjct: 74 GGGCGFAVAISESGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHC 133
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP--------- 167
VS+T+ GE YTWGW+ECVPS KV D + F+KDS GKQS L TEQ P
Sbjct: 134 VSLTDKGEAYTWGWKECVPSGKVLLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTG 192
Query: 168 ------SDKRAGEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAG 220
+++A E +K+R+TSSA++E E+ + S DE F SPCLVTL PGV+I+ +AAG
Sbjct: 193 GMLSRVDNRKAREGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAG 252
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
GRHTL LSDMGQVWGWGYGGEGQLGLGSR K+V +PHLIPC +A GKDRP LV QGS+
Sbjct: 253 GRHTLALSDMGQVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSL 312
Query: 281 NSS---GKAGRSYVKEIACGGRHSAVVTD 306
+S+ K S VK IACGGRHSAV+TD
Sbjct: 313 SSTEDISKVPGSRVKGIACGGRHSAVITD 341
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ GVK+ +AAG HTL S GQV+ +G GQLG G+
Sbjct: 359 GNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGAD----- 413
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P L A++ +++ K ++CG RHS V+T+
Sbjct: 414 QAETLPKLLDASNLENK------------------RAKIVSCGARHSVVLTE 447
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
PG ++ +A GGRH+ +++D GQ+ +G+G GQ GLG+
Sbjct: 322 PGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGN 360
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 196 DEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
D+ TL L N K K V+ G RH+++L++ G+++ WG+ GQLGLG I + +
Sbjct: 413 DQAETLPKLLDASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNI 472
Query: 254 PTP 256
P+P
Sbjct: 473 PSP 475
>gi|255566472|ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
Length = 476
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/318 (61%), Positives = 234/318 (73%), Gaps = 16/318 (5%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
MNG +E + E KE +V+MWGYLPG P++SPILSP+ R G SWKDVCGGGCGF
Sbjct: 1 MNGEGKEVMKMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVR-ADGYSWKDVCGGGCGF 59
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A SESGKLITWGS DD GQSY+TSGKHGE PEPFPLPTEAS++KAAAGWAHC++ T+
Sbjct: 60 AMAISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATDT 119
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR----------- 171
GEVYTWGW+EC+PS KV D AG +KD + S TEQ P +
Sbjct: 120 GEVYTWGWKECIPSGKVFGDPSVAGGTEKDVFERHSPFLTEQVSPRSQSSRSTGGIDGRG 179
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+G+E KRR+ SSA++ +E+ +SGDE + PCLVTLNPGV+IT VAAGGRHTL LSD+G
Sbjct: 180 SGDESTKRRRISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALSDIG 239
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR--- 288
QVWGWGYGGEGQLGLGSRI+MV +PH +PC++ + GKDRP +G + S G R
Sbjct: 240 QVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVD-PSYGKDRPAPFSRGGMTSEGHGFRVPG 298
Query: 289 SYVKEIACGGRHSAVVTD 306
SYVK IACGGRHSAV+TD
Sbjct: 299 SYVKGIACGGRHSAVITD 316
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 27/108 (25%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI- 259
LSP V+ G++I VAAG HT+ +S G V+ +G GQLG GS + TP L+
Sbjct: 340 LSPICVSPLLGIRIAGVAAGLWHTICVSADGDVYAFGGNQFGQLGTGSD-QAETTPRLLD 398
Query: 260 -PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE + K ++CG RHSA+V +
Sbjct: 399 APSLEDI------------------------HAKVVSCGARHSAIVAE 422
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
V+ G RH+ I+++ G+V+ WG+ GQLGLG I + +P+P I
Sbjct: 410 VSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSPVTI 453
>gi|356539897|ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 480
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/320 (60%), Positives = 238/320 (74%), Gaps = 16/320 (5%)
Query: 3 MNGSKREENE-KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGC 60
MNG E + +ME KE +VYMWGYLPG P+++P+L+P+ R+ G SWKDVCGGGC
Sbjct: 1 MNGEGSEAMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPPSGYSWKDVCGGGC 60
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
GFA+A SE GKLITWGS DD GQSY+TSGKHGE PEPFPLPTE ++VKAAAGWAHCVSVT
Sbjct: 61 GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVT 120
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------- 170
+ GEVYTWGWRECVPS KV + + S +KD G+QS+ TEQ P +
Sbjct: 121 DCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTGGTAS 180
Query: 171 -RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+GEE KRR+ SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LSD
Sbjct: 181 GTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSD 240
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR- 288
+GQVWGWGYGGEGQLGLGSRI+MV +PHL+PC+ ++ GKD + +GS++S G+ R
Sbjct: 241 IGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDISASLARGSMSSDGQNFRV 300
Query: 289 --SYVKEIACGGRHSAVVTD 306
SY+K IACGGRHSAV+TD
Sbjct: 301 PGSYIKGIACGGRHSAVITD 320
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 25/107 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG G + + +P
Sbjct: 344 LSPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGGDQAETIPRLLDC 403
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE+ VN VK I+CG RH+A++TD
Sbjct: 404 PSLEN---------------VN---------VKRISCGARHTALITD 426
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V + +++ G RHT +++D G+V+ WG+ GQLGLG I + +P+
Sbjct: 409 VNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPS 453
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/307 (63%), Positives = 226/307 (73%), Gaps = 17/307 (5%)
Query: 7 KREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALA 65
K +E+ KMEE K+ VYMWGYLPG SPEKSPIL+PI DSWKDVCGGGCGFA+A
Sbjct: 9 KEQEDGKMEEGKKATVYMWGYLPGVSPEKSPILNPISVNYPDADDSWKDVCGGGCGFAMA 68
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
SE GKL+TWGSADDE QSY+T GKHGETPE F LP+EAS++KAAA + GE+
Sbjct: 69 ISEGGKLVTWGSADDENQSYVTCGKHGETPEAFLLPSEASILKAAA---------DTGEL 119
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEVVKRRKT 182
YTWGW+ECVP K RD S G+ QKD+ KQ+ L TEQ A DKR GEE+VKRR+
Sbjct: 120 YTWGWKECVPLGKFPRDGASWGALQKDNAAKQNVLSTEQVSSASSDDKRNGEEIVKRRRV 179
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
S +EE+EN GDE+FT++P +V+L PGV+IT VAAGGRHTL LSD GQVWGWGYGGEG
Sbjct: 180 S-LKEENENSEYGDEYFTVTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEG 238
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGR 299
QLGLGSR+KMV +PHLIP E +GK R +V GS N + SYVKEIACGGR
Sbjct: 239 QLGLGSRVKMVSSPHLIPFTEQPTTGKHRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGR 298
Query: 300 HSAVVTD 306
HSAVVTD
Sbjct: 299 HSAVVTD 305
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 98/260 (37%), Gaps = 74/260 (28%)
Query: 82 GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
G Y T TP L + AAG H +++++ G+V+ WG
Sbjct: 191 GDEYFTV-----TPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWG------------ 233
Query: 142 DFGSAGSFQKDSTGKQSALP-----TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
+G G S K + P TEQ P+ + VV T+
Sbjct: 234 -YGGEGQLGLGSRVKMVSSPHLIPFTEQ--PTTGKHRSSVVHNGSTNL------------ 278
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
P V+ PG + ++A GGRH+ +++D G + +G+G GQ G GS + P
Sbjct: 279 ------PAQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQL-RP 331
Query: 257 HLIPCL-----EHAASGKDRPLLVR-QGSV-----NSSGKAG------------------ 287
+P L E A+G + + G V N G+ G
Sbjct: 332 TSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCL 391
Query: 288 -RSYVKEIACGGRHSAVVTD 306
VK ++CG RHSA++ +
Sbjct: 392 ESKLVKMVSCGARHSAILLE 411
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 203 PCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
PCL + K+ K V+ G RH+ IL + GQV+ WG+ GQLG+G I TP +P
Sbjct: 389 PCLES-----KLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSIDR-NTPTQVP 441
>gi|297740323|emb|CBI30505.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/306 (64%), Positives = 229/306 (74%), Gaps = 24/306 (7%)
Query: 24 MWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
MWGYLPG S + SP+LSP+P L DSWKDVCGGGCGFA+A SESGKLITWGS D
Sbjct: 1 MWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGFAVAISESGKLITWGSED 60
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
D GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHCVS+T+ GE YTWGW+ECVPS KV
Sbjct: 61 DLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKV 120
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEVVKRRKTSS 184
D + F+KDS GKQS L TEQ P +++A E +K+R+TSS
Sbjct: 121 LLD-STGVRFEKDSFGKQSLLQTEQEGPKPQSSNSTGGMLSRVDNRKAREGSIKKRRTSS 179
Query: 185 AREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
A++E E+ + S DE F SPCLVTL PGV+I+ +AAGGRHTL LSDMGQVWGWGYGGEGQ
Sbjct: 180 AKQEPESSSMSDDETFLASPCLVTLGPGVRISTIAAGGRHTLALSDMGQVWGWGYGGEGQ 239
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS---GKAGRSYVKEIACGGRH 300
LGLGSR K+V +PHLIPC +A GKDRP LV QGS++S+ K S VK IACGGRH
Sbjct: 240 LGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPGSRVKGIACGGRH 299
Query: 301 SAVVTD 306
SAV+TD
Sbjct: 300 SAVITD 305
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ GVK+ +AAG HTL S GQV+ +G GQLG G+
Sbjct: 323 GNTHDQLRPACVSALSGVKVAGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGAD----- 377
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P L A++ +++ K ++CG RHS V+T+
Sbjct: 378 QAETLPKLLDASNLENK------------------RAKIVSCGARHSVVLTE 411
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
PG ++ +A GGRH+ +++D GQ+ +G+G GQ GLG+
Sbjct: 286 PGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGN 324
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 196 DEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
D+ TL L N K K V+ G RH+++L++ G+++ WG+ GQLGLG I + +
Sbjct: 377 DQAETLPKLLDASNLENKRAKIVSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNI 436
Query: 254 PTP 256
P+P
Sbjct: 437 PSP 439
>gi|225449388|ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
vinifera]
Length = 484
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/325 (60%), Positives = 238/325 (73%), Gaps = 22/325 (6%)
Query: 3 MNGSKREENEK--MEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGG 59
MNG + +E ME +E +V+M GYLPG P++SP+LSPI R +W+DVCGGG
Sbjct: 1 MNGEGKGPDEAVVMEGVREKLVFMMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGG 60
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHC SV
Sbjct: 61 CGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASV 120
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------------ 167
TE GEVYTWGW+ECVPS KV D GS +KD +QS+ TEQ P
Sbjct: 121 TENGEVYTWGWKECVPSGKVFGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGV 180
Query: 168 ---SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
K GEE KRR+ S+++ +E+ +SGDE + PCLVTLNPGV+I VAAGGRHT
Sbjct: 181 SGTDSKGGGEESTKRRRMLSSKQAAES-SSGDETLSALPCLVTLNPGVRIANVAAGGRHT 239
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
L LSD+GQVWGWGYGGEGQLGLGSRI+MV +PH +PC+E ++ GK+R + +G+V++ G
Sbjct: 240 LALSDVGQVWGWGYGGEGQLGLGSRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEG 299
Query: 285 KAGR---SYVKEIACGGRHSAVVTD 306
++ R SYVK IACGGRHSAV+TD
Sbjct: 300 QSLRVPGSYVKWIACGGRHSAVITD 324
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G++I +VAAG HT+ +S G V+ +G GQLG G V P +P
Sbjct: 348 LSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTG-----VDQPETLP 402
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
L A S ++ ++ K ++CG RHSA++T
Sbjct: 403 RLLDAPSLEN------------------AHAKIVSCGARHSAIIT 429
>gi|356569137|ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Glycine max]
Length = 472
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/319 (60%), Positives = 236/319 (73%), Gaps = 22/319 (6%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGCG 61
MNG E +E M+ KE++VYMWGYLPG P+++P+L+P+ R+ G WKDVCGGGCG
Sbjct: 1 MNG---EGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCG 57
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SE GKLITWGS DD GQSY+TSGKHGETPEPFPLPTE ++VKAAAGWAHCVSVT+
Sbjct: 58 FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTD 117
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK----------- 170
GEVYTWGWRECVPS KV + + S +KD +QS+ TEQ P +
Sbjct: 118 CGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSFLTEQVSPRSQGSKSTGGTASG 177
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+GEE KRR+ SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LSD+
Sbjct: 178 TSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDI 237
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR-- 288
GQVWGWGYGGEGQLGLGSRI+MV +PHL+PC+ ++ GKD + S++S G+ R
Sbjct: 238 GQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARV----SISSDGQNFRVP 293
Query: 289 -SYVKEIACGGRHSAVVTD 306
SY+K IACGGRHSAV+TD
Sbjct: 294 GSYIKGIACGGRHSAVITD 312
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 25/107 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG G + + +P
Sbjct: 336 LSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDC 395
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE+ VN VK I+CG RH+A++ D
Sbjct: 396 PSLEN---------------VN---------VKRISCGARHTALIAD 418
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
V + +++ G RHT +++D G+V+ WG+ GQLGLG I + +P+ I
Sbjct: 401 VNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTI 449
>gi|334185962|ref|NP_190951.2| Regulator of chromosome condensation (RCC1) family protein
[Arabidopsis thaliana]
gi|332645627|gb|AEE79148.1| Regulator of chromosome condensation (RCC1) family protein
[Arabidopsis thaliana]
Length = 472
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/301 (62%), Positives = 224/301 (74%), Gaps = 11/301 (3%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARLC----GGDSWKDVCGGGCGFALATSESGK 71
ECK TVVYM GYLPG + EKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13 ECKATVVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGK 72
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LITWGS DDEGQSY+ SGKHGETPEPFPLPTEA VV+A++GWAHC VTE GE +TWGW+
Sbjct: 73 LITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWK 132
Query: 132 ECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+PS S S Q D S G +A T +++ GEE VKRR+ S+A++E+
Sbjct: 133 ECIPSKDPVGKQQSGSSEQGDIASQGSNAASGTT-LQNENQKVGEESVKRRRVSTAKDET 191
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
E SG +FF +P LV++ GV+IT VA GGRHTL LSD+GQ+WGWGYGGEGQLGLGSR
Sbjct: 192 EGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSR 251
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQ-GSVNSSGKAGR---SYVKEIACGGRHSAVVT 305
IKMV +PHLIPCLE SGK+R ++ Q G+ +S +A R Y+K I+CGGRHSA +T
Sbjct: 252 IKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAIT 311
Query: 306 D 306
D
Sbjct: 312 D 312
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 51/257 (19%)
Query: 77 SADDEGQSYLTSGKH-GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW----- 130
+A DE + + + G TP + + A G H +++++ G+++ WG+
Sbjct: 186 TAKDETEGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQ 245
Query: 131 ------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+ V S + S GS ++ S T + + + G+ +K
Sbjct: 246 LGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQ-YIKAISCGG 304
Query: 185 AREESENPASGDEFF---------------TLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ A G F L P V+ V++ VAAG HT+ +S
Sbjct: 305 RHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISS 364
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G+V+ +G GQLG G+ +HA + P L+ N GK
Sbjct: 365 DGKVYAFGGNQFGQLGTGT--------------DHA---EILPRLLD--GQNLEGK---- 401
Query: 290 YVKEIACGGRHSAVVTD 306
+ K ++CG RHSAV+ +
Sbjct: 402 HAKAVSCGARHSAVLAE 418
>gi|147790448|emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
Length = 498
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/318 (63%), Positives = 230/318 (72%), Gaps = 37/318 (11%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSE 68
KMEE +VVYMWGYLPG S + SP+LSP+P L DSWKDVCGGGCGFA+A SE
Sbjct: 2 KMEE---SVVYMWGYLPGASLQGSPLLSPVPVALPASTLSEDSWKDVCGGGCGFAVAISE 58
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SGKLITWGS DD GQSYLTSG+HGETPEPFPLPTEA +VKAAAGWAHCVS+T+ GE YTW
Sbjct: 59 SGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTW 118
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP---TEQAPP-------------SDKRA 172
GW+ECVPS KV DSTG A P TE P +++A
Sbjct: 119 GWKECVPSGKVLL----------DSTGTNVAKPELDTEGPKPQXSNSTGGMLSRVDNRKA 168
Query: 173 GEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
E +K+R+TSSA++E E+ + S DE F SPCLVTL PGV+I+ VAAGGRHTL LSDMG
Sbjct: 169 REGSIKKRRTSSAKQEPESSSMSDDETFLASPCLVTLGPGVRISTVAAGGRHTLALSDMG 228
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS---GKAGR 288
QVWGWGYGGEGQLGLGSR K+V +PHLIPC +A GKDRP LV QGS++S+ K
Sbjct: 229 QVWGWGYGGEGQLGLGSRTKLVSSPHLIPCFNPSAYGKDRPSLVHQGSLSSTEDISKVPG 288
Query: 289 SYVKEIACGGRHSAVVTD 306
S VK IACGGRHSAV+TD
Sbjct: 289 SRVKGIACGGRHSAVITD 306
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ GVK+ +AAG HTL S GQV+ +G GQLG G+
Sbjct: 324 GNTHDQLRPACVSALSGVKVXGIAAGLWHTLCFSAEGQVYAFGGNQFGQLGTGADQAEFD 383
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ IP L L + N K K ++CG RHS V+T+
Sbjct: 384 SRIXIPSLGEFRKRLTETLPKLLDASNLENK----RAKIVSCGARHSVVLTE 431
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
PG ++ +A GGRH+ +++D GQ+ +G+G GQ GLG+
Sbjct: 287 PGSRVKGIACGGRHSAVITDAGQLLTFGWGLHGQCGLGN 325
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
V+ G RH+++L++ G+++ WG+ GQLGLG I + +P+P
Sbjct: 419 VSCGARHSVVLTEGGEIFSWGWNKYGQLGLGDCIDRNIPSP 459
>gi|356551654|ref|XP_003544189.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/307 (59%), Positives = 229/307 (74%), Gaps = 15/307 (4%)
Query: 15 EECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGD-SWKDVCGGGCGFALATSESGKLI 73
E +TV+YMWGYLPG P+++P+L+P+ R+ D SW DVCGGGCGFA+A SESGKLI
Sbjct: 11 EGALQTVLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGGCGFAIAISESGKLI 70
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
TWGS DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHCV+VTE G VYTWGW+EC
Sbjct: 71 TWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVAVTEHGAVYTWGWKEC 130
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-----------SDKRAGEEVVKRRKT 182
+PS +V + + S +KD G+ S + TEQ P + +GEE KRR+
Sbjct: 131 IPSGRVFGEPSTGVSLEKDVPGRHSQVSTEQVSPRSQGSRSTGGTASSNSGEESTKRRRV 190
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
SSA++ +E+ +S D+ T PCLVTLNPG++I VAAGGRHTL LSD G VW WGYGGEG
Sbjct: 191 SSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALSDTGLVWAWGYGGEG 250
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGR 299
QLGLGSRI+MV TPHL+PC++ + KDR + +G+++S G+ R SY+K IACGGR
Sbjct: 251 QLGLGSRIRMVSTPHLVPCIDSSYYSKDRSATLARGNMDSEGQTFRVPGSYIKRIACGGR 310
Query: 300 HSAVVTD 306
HSAV+TD
Sbjct: 311 HSAVITD 317
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G+ I +VAAG HT+ S G V+ +G GQLG G
Sbjct: 341 LSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFGQLGTG------------- 387
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
A + P L+ S+++ K I+CG RH+A+VT+
Sbjct: 388 ----ADQAETLPRLLDSPSLDN------LRAKNISCGARHTALVTE 423
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 41/197 (20%)
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G+ D EGQ++ G + + + A G H +T+AG + T+GW
Sbjct: 286 GNMDSEGQTFRVPGSY--------------IKRIACGGRHSAVITDAGALLTFGWGL--- 328
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE--EVVKRRKTSSAREESENP- 192
+G G D + + + ++ A V EN
Sbjct: 329 -------YGQCGQGITDDELSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQF 381
Query: 193 ----ASGDEFFTL-----SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
D+ TL SP L L + ++ G RHT ++++ G+V+ WG+ GQ
Sbjct: 382 GQLGTGADQAETLPRLLDSPSLDNL----RAKNISCGARHTALVTEGGKVFCWGWNKYGQ 437
Query: 244 LGLGSRI-KMVPTPHLI 259
LGLG I + +P+ +I
Sbjct: 438 LGLGDVIDRNIPSEVII 454
>gi|356501083|ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 477
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 231/321 (71%), Gaps = 19/321 (5%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGD-SWKDVCGGG 59
M MN + ++ V+YMWGYLPG P+++P+L+P+ R+ D SW DVCGGG
Sbjct: 1 MAMNNGDGTDGGALQR----VLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGG 56
Query: 60 CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
CGFA+A SESGKLITWGS DD GQSY+TSGKHGETPEPFPLPTE S+VKAAAGWAHCV+V
Sbjct: 57 CGFAIAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTETSIVKAAAGWAHCVAV 116
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-----------S 168
TE GEVYTWGW+EC+PS KV + + S +KD G+ + L TEQ P +
Sbjct: 117 TEHGEVYTWGWKECIPSGKVFGESSTGVSLEKDVPGRHTPLFTEQVSPRSQGSRSTGGTA 176
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+GEE KRR+ SSA++ +E+ +S D+ T PCLVTLNPG++I VAAGGRHTL LS
Sbjct: 177 SSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALS 236
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
D G VW WGYGGEGQLGLGSRI+MV TPHL+PC++ + KDR + +G++ S G+ R
Sbjct: 237 DTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYVKDRSATLARGNMGSEGQTFR 296
Query: 289 ---SYVKEIACGGRHSAVVTD 306
SY+K IACGGRHSAV+TD
Sbjct: 297 IPGSYIKRIACGGRHSAVITD 317
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 57/230 (24%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ AAG H +++++ G V+ WG +G G S + + P
Sbjct: 222 IASVAAGGRHTLALSDTGLVWAWG-------------YGGEGQLGLGSRIRMVSTP-HLV 267
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P D VK R + AR N S + F + PG I ++A GGRH+
Sbjct: 268 PCIDS---SYYVKDRSATLARG---NMGSEGQTFRI--------PGSYIKRIACGGRHSA 313
Query: 226 ILSDMGQVWGWGYGGEGQLGLG-SRIKMVPT---PHLIPCLEHAASGKDRPLLVR-QGSV 280
+++D G + +G+G GQ G G + ++ PT L +E A+G + G V
Sbjct: 314 VITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSLLGIHIEGIAAGLWHTVCTSADGDV 373
Query: 281 -----NSSGKAGRS-------------------YVKEIACGGRHSAVVTD 306
N G+ G + K I+CG RH+A+VT+
Sbjct: 374 YAFGGNQFGQLGTGADQAETLPRLVDSPSLKNLHAKNISCGARHTALVTE 423
>gi|356569139|ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Glycine max]
Length = 459
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/308 (61%), Positives = 233/308 (75%), Gaps = 13/308 (4%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC-GGDSWKDVCGGGCG 61
MNG E +E M+ KE++VYMWGYLPG P+++P+L+P+ R+ G WKDVCGGGCG
Sbjct: 1 MNG---EGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCG 57
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SE GKLITWGS DD GQSY+TSGKHGETPEPFPLPTE ++VKAAAGWAHCVSVT+
Sbjct: 58 FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTD 117
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
GEVYTWGWRECVPS KV + + S +KD +QS+ T + +GEE KRR+
Sbjct: 118 CGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSKST--GGTASGTSGEESSKRRR 175
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
SSA++ +E +S D+ T PCLVTLNPGV+I VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 176 VSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGE 235
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGG 298
GQLGLGSRI+MV +PHL+PC+ ++ GKD + S++S G+ R SY+K IACGG
Sbjct: 236 GQLGLGSRIRMVSSPHLVPCINSSSYGKDMARV----SISSDGQNFRVPGSYIKGIACGG 291
Query: 299 RHSAVVTD 306
RHSAV+TD
Sbjct: 292 RHSAVITD 299
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 25/107 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG G + + +P
Sbjct: 323 LSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDC 382
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE+ VN VK I+CG RH+A++ D
Sbjct: 383 PSLEN---------------VN---------VKRISCGARHTALIAD 405
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
V + +++ G RHT +++D G+V+ WG+ GQLGLG I
Sbjct: 388 VNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVI 426
>gi|357460949|ref|XP_003600756.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489804|gb|AES71007.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 464
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 183/312 (58%), Positives = 228/312 (73%), Gaps = 23/312 (7%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKL 72
E KE +VYMWGYLPG P+++P+L+P+ R+ GG +WKDV GGGCGFA+A SESGKL
Sbjct: 7 EVKEKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAMAISESGKL 66
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
ITWGS DD GQSY+TSGKHGETPEPF LP E S+VKAA+ WAHCV+ T+ GEVYTWGW+E
Sbjct: 67 ITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEVYTWGWKE 126
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------RAGEEVVKRRKTS 183
C+PS KV + S +KD+ GK S+ TEQ + +GEE KRRK S
Sbjct: 127 CIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQVSSRSQVSKSTGGTVSSGEESSKRRKVS 186
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
SA++ ++ +SGD+ T PCLVTLNPGVKIT VAAGGRHTL+LSD+GQVWGWGYGGEGQ
Sbjct: 187 SAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQ 246
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRH 300
LGLGSR++MV +PH+IPC++ ++ + QGS++S G R S +K IACGGRH
Sbjct: 247 LGLGSRVRMVSSPHIIPCIDSSS--------LVQGSMSSEGHNFRIPGSCIKAIACGGRH 298
Query: 301 SAVVTDMSYPIA 312
SAV+TD +A
Sbjct: 299 SAVITDAGAVLA 310
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 52/107 (48%), Gaps = 25/107 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ S G V+ +G GQLG GS + + +P
Sbjct: 328 LSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDC 387
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE+ VN VK I+CG RH+A+VTD
Sbjct: 388 PSLEN---------------VN---------VKTISCGARHTALVTD 410
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
V + ++ G RHT +++D G+V+ WG+ GQLGLG I
Sbjct: 393 VNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVI 431
>gi|296086178|emb|CBI31619.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/302 (62%), Positives = 225/302 (74%), Gaps = 20/302 (6%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGG-DSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
M GYLPG P++SP+LSPI R +W+DVCGGGCGFA+A SESGKLITWGS DD G
Sbjct: 1 MMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGGCGFAMAISESGKLITWGSTDDLG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
QSY+TSGKHGETPEPFPLPTEAS+VKAAAGWAHC SVTE GEVYTWGW+ECVPS KV D
Sbjct: 61 QSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVPSGKVFGD 120
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEVVKRRKTSSARE 187
GS +KD +QS+ TEQ P K GEE KRR+ S+++
Sbjct: 121 PSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEESTKRRRMLSSKQ 180
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+E+ +SGDE + PCLVTLNPGV+I VAAGGRHTL LSD+GQVWGWGYGGEGQLGLG
Sbjct: 181 AAES-SSGDETLSALPCLVTLNPGVRIANVAAGGRHTLALSDVGQVWGWGYGGEGQLGLG 239
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRHSAVV 304
SRI+MV +PH +PC+E ++ GK+R + +G+V++ G++ R SYVK IACGGRHSAV+
Sbjct: 240 SRIRMVSSPHPVPCVESSSYGKERSSALARGNVSTEGQSLRVPGSYVKWIACGGRHSAVI 299
Query: 305 TD 306
TD
Sbjct: 300 TD 301
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G++I +VAAG HT+ +S G V+ +G GQLG G V P +P
Sbjct: 325 LSPTCVSSLLGIQIERVAAGLWHTVCISADGDVYTFGGNQFGQLGTG-----VDQPETLP 379
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
L A S ++ ++ K ++CG RHSA++T
Sbjct: 380 RLLDAPSLEN------------------AHAKIVSCGARHSAIIT 406
>gi|7630003|emb|CAB88345.1| putative protein [Arabidopsis thaliana]
Length = 487
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/316 (59%), Positives = 224/316 (70%), Gaps = 26/316 (8%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARLC----GGDSWKDVCGGGCGFALATSESGK 71
ECK TVVYM GYLPG + EKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13 ECKATVVYMSGYLPGAASEKSPILSPVPVRLSAAVHGGDSWKDVCGGGCGFAMAISEKGK 72
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LITWGS DDEGQSY+ SGKHGETPEPFPLPTEA VV+A++GWAHC VTE GE +TWGW+
Sbjct: 73 LITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHCAVVTETGEAFTWGWK 132
Query: 132 ECVPSAKVTRDFGSAGSFQKD--STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+PS S S Q D S G +A T +++ GEE VKRR+ S+A++E+
Sbjct: 133 ECIPSKDPVGKQQSGSSEQGDIASQGSNAASGT-TLQNENQKVGEESVKRRRVSTAKDET 191
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL---------------SDMGQVW 234
E SG +FF +P LV++ GV+IT VA GGRHTL L SD+GQ+W
Sbjct: 192 EGHTSGGDFFATTPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDDHVFTEVSDLGQIW 251
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ-GSVNSSGKAGR---SY 290
GWGYGGEGQLGLGSRIKMV +PHLIPCLE SGK+R ++ Q G+ +S +A R Y
Sbjct: 252 GWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQY 311
Query: 291 VKEIACGGRHSAVVTD 306
+K I+CGGRHSA +TD
Sbjct: 312 IKAISCGGRHSAAITD 327
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 23/112 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ V++ VAAG HT+ +S G+V+ +G GQLG G+
Sbjct: 345 GNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGT------ 398
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+HA + P L+ N GK + K ++CG RHSAV+ +
Sbjct: 399 --------DHA---EILPRLLD--GQNLEGK----HAKAVSCGARHSAVLAE 433
>gi|449465846|ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 491
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 240/331 (72%), Gaps = 27/331 (8%)
Query: 3 MNGS-KREENEKM---EECKET-VVYMWGYLPGTSPEKSPILSPIPARLCGGDS-----W 52
MNG R E+E + E+ K+ +V+MWGYLPG P++SP+LSP+ RL G D+ W
Sbjct: 1 MNGEGSRGEDEIVGMEEDVKDNKIVFMWGYLPGALPQRSPLLSPVVVRLPGKDATDAHGW 60
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+DVCGGGCGFA+A S +GKLITWG+ DD GQSY+TSGKHGETPEPFPLPTEAS+VKAAAG
Sbjct: 61 RDVCGGGCGFAVAISANGKLITWGATDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAG 120
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---- 168
WAH V++T+ GEVYTWGW+ECVPS K+ D + ++++D +QS+ +Q P
Sbjct: 121 WAHTVAITDRGEVYTWGWKECVPSGKMFTDLSAGAAYERDVLERQSSSVIDQVSPRLQAS 180
Query: 169 ---------DKRA-GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
+ RA G E KRR+ SSA+ +E+ +S DE + PCLVTLNPGV+IT V+
Sbjct: 181 RSSGVVSSIEARAGGAESTKRRRVSSAKLAAESSSSSDETLSAVPCLVTLNPGVRITSVS 240
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
AGGRHTL LSDMGQVWGWGYGGEGQLGLGSRI+MV +PH IPC+E ++ GKDR + +G
Sbjct: 241 AGGRHTLALSDMGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCIESSSFGKDRSAALARG 300
Query: 279 SVNSSGKAGR---SYVKEIACGGRHSAVVTD 306
S + G+ R SYVK IACGGRHSA VTD
Sbjct: 301 SASLEGQGSRIPGSYVKGIACGGRHSAAVTD 331
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 25/107 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLI 259
LSP V+ G++I VAAG HT+ +S G ++ +G GQLG G+ + + +P
Sbjct: 355 LSPTCVSSLLGIRIESVAAGLWHTVCISSDGDIYSFGGNQFGQLGTGADQAETLPRLLDA 414
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P +E+ VN+ K ++CG RHSA+V++
Sbjct: 415 PSVEN---------------VNA---------KVVSCGARHSAIVSE 437
>gi|357460953|ref|XP_003600758.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489806|gb|AES71009.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 334
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/325 (56%), Positives = 227/325 (69%), Gaps = 43/325 (13%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKL 72
E KE +VYMWGYLPG P+++P+L+P+ R+ GG +WKDV GGGCGFA+A SESGKL
Sbjct: 7 EVKEKMVYMWGYLPGALPQRTPLLTPVLVRVPATSGGYNWKDVSGGGCGFAMAISESGKL 66
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
ITWGS DD GQSY+TSGKHGETPEPF LP E S+VKAA+ WAHCV+ T+ GEVYTWGW+E
Sbjct: 67 ITWGSTDDLGQSYVTSGKHGETPEPFSLPNEVSIVKAASAWAHCVAATDCGEVYTWGWKE 126
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA------------PPSD----------- 169
C+PS KV + S +KD+ GK S+ TEQ PSD
Sbjct: 127 CIPSGKVFGETSQGVSPEKDAQGKPSSFLTEQGMSNLFSMDICLQIPSDFATVSSRSQVS 186
Query: 170 ------KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+GEE KRRK SSA++ ++ +SGD+ T PCLVTLNPGVKIT VAAGGRH
Sbjct: 187 KSTGGTVSSGEESSKRRKVSSAKQAAQTSSSGDDILTAMPCLVTLNPGVKITSVAAGGRH 246
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL+LSD+GQVWGWGYGGEGQLGLGSR++MV +PH+IPC++ ++ + QGS++S
Sbjct: 247 TLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCIDSSS--------LVQGSMSSE 298
Query: 284 GKAGR---SYVKEIACGGRHSAVVT 305
G R S +K IACGGRHSAV+T
Sbjct: 299 GHNFRIPGSCIKAIACGGRHSAVIT 323
>gi|297816690|ref|XP_002876228.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
lyrata]
gi|297322066|gb|EFH52487.1| hypothetical protein ARALYDRAFT_485777 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 188/330 (56%), Positives = 224/330 (67%), Gaps = 54/330 (16%)
Query: 16 ECKETVVYMWGYLPGTSPEKSPILSPIPARL----CGGDSWKDVCGGGCGFALATSESGK 71
ECK TVVYM GYLPG +PEKSPILSP+P RL GGDSWKDVCGGGCGFA+A SE GK
Sbjct: 13 ECKATVVYMSGYLPGAAPEKSPILSPVPVRLPAAVHGGDSWKDVCGGGCGFAMAISEKGK 72
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
LITWGS DDEGQSY+ SGKHGETPE FPLPTEA VV+A++GWAHC VTEAGE +TWGW+
Sbjct: 73 LITWGSTDDEGQSYVASGKHGETPELFPLPTEAPVVQASSGWAHCAVVTEAGEAFTWGWK 132
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---------------KRAGEEV 176
EC+PS KD GKQ + +EQ + ++ GE+
Sbjct: 133 ECIPS--------------KDPVGKQQSGSSEQGEIASQGSNAASGMTLQNETRKVGEDS 178
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL--------- 227
VKRR+ S+A++E+E SG +FF +P LV++ GV+IT VA GGRHTL L
Sbjct: 179 VKRRRVSTAKDETEGHTSGGDFFATAPSLVSVGLGVRITSVATGGRHTLALSVEDSFEDD 238
Query: 228 ------SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG--- 278
SD+GQ+WGWGYGGEGQLGLGSRIKMV +PHLIPCLE SGK+R ++ QG
Sbjct: 239 HVFAEVSDIGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTT 298
Query: 279 --SVNSSGKAGRSYVKEIACGGRHSAVVTD 306
S S + GR Y+K I+CGGRHSA +TD
Sbjct: 299 TTSTQVSREPGR-YIKAISCGGRHSAAITD 327
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ L P V+ V++ VAAG HT+ +S G+V+ +G GQLG G+
Sbjct: 345 GNTNDQLRPMAVSSMKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGT------ 398
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+HA + P L+ G N GK Y K ++CG RHSAV+ +
Sbjct: 399 --------DHA---EILPRLL--GGQNLEGK----YAKAVSCGARHSAVLAE 433
>gi|326533000|dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 177/315 (56%), Positives = 223/315 (70%), Gaps = 24/315 (7%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSES 69
+ E K VV MWGYLPG SP++SP+L P+P RL GD+W+DVCGGGCGFA+A SES
Sbjct: 29 REEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISES 88
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKL+TWGS DD GQSY+T+GKH ETPE FPLP++ ++ +A AGWAHCV++T+ G VYTWG
Sbjct: 89 GKLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWG 148
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP---------------PSDKRAGE 174
W+ECVP+ +V D S G+ +KD +QSA +Q PS+ R E
Sbjct: 149 WKECVPTGRVIADQASVGTLEKDE--RQSASANDQVSPRSQVSRTSSGAASGPSESRGTE 206
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ KRR+ SSA++ +++ SGDE + PC+VT N GVKIT VAAGGRHTL LSD GQVW
Sbjct: 207 DSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALSDFGQVW 266
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYV 291
GWGYGGEGQLGLGSRI+ V +PH IPC+E A+ KDRP ++ G+ N+ G+ + S V
Sbjct: 267 GWGYGGEGQLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMK-GNKNAEGQINKVMGSRV 325
Query: 292 KEIACGGRHSAVVTD 306
IACGGRHS VVTD
Sbjct: 326 TAIACGGRHSVVVTD 340
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 102/256 (39%), Gaps = 50/256 (19%)
Query: 77 SADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW---- 130
S+ +G TSG + P T + AAG H +++++ G+V+ WG+
Sbjct: 215 SSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALSDFGQVWGWGYGGEG 274
Query: 131 ----------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
C+ SA ++D SA K++ G+ + + +
Sbjct: 275 QLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMKGNKNAEGQINKVMGSRVTAIACGGRH 334
Query: 175 EVVKRRK---TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
VV + G+ LSP V+ GVK+ VAAG HT+ +S G
Sbjct: 335 SVVVTDSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLWHTVSISADG 394
Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
V+ +G GQLG+GS + + +P P LE+ K RS
Sbjct: 395 DVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLEN--------------------KNARS- 433
Query: 291 VKEIACGGRHSAVVTD 306
++CG RHSA++TD
Sbjct: 434 ---VSCGARHSAIITD 446
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V+ G RH+ I++D G+V+ WG+ GQLGLG + +PC+
Sbjct: 434 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMD-----RNVPCI 474
>gi|326511212|dbj|BAJ87620.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 177/326 (54%), Positives = 224/326 (68%), Gaps = 35/326 (10%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSES 69
+ E K VV MWGYLPG SP++SP+L P+P RL GD+W+DVCGGGCGFA+A SES
Sbjct: 29 REEAGKGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISES 88
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
GKL+TWGS DD GQSY+T+GKH ETPE FPLP++ ++ +A AGWAHCV++T+ G VYTWG
Sbjct: 89 GKLLTWGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYTWG 148
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ------------------------- 164
W+ECVP+ +V D S G+ +KD +QSA +Q
Sbjct: 149 WKECVPTGRVIADQASVGTLEKDE--RQSASANDQGISHNKGNSIAVSPRSQVSRTSSGA 206
Query: 165 -APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ PS+ R E+ KRR+ SSA++ +++ SGDE + PC+VT N GVKIT VAAGGRH
Sbjct: 207 ASGPSESRGTEDSTKRRRLSSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRH 266
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL LSD GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A+ KDRP ++ G+ N+
Sbjct: 267 TLALSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMK-GNKNAE 325
Query: 284 GKAGR---SYVKEIACGGRHSAVVTD 306
G+ + S V IACGGRHS VVTD
Sbjct: 326 GQINKVMGSRVTAIACGGRHSVVVTD 351
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 102/256 (39%), Gaps = 50/256 (19%)
Query: 77 SADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW---- 130
S+ +G TSG + P T + AAG H +++++ G+V+ WG+
Sbjct: 226 SSAKQGNDSSTSGDENLSAPPCVVTFNTGVKITAVAAGGRHTLALSDFGQVWGWGYGGEG 285
Query: 131 ----------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
C+ SA ++D SA K++ G+ + + +
Sbjct: 286 QLGLGSRIRTVSSPHTIPCIESASYSKDRPSAMKGNKNAEGQINKVMGSRVTAIACGGRH 345
Query: 175 EVVKRRK---TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
VV + G+ LSP V+ GVK+ VAAG HT+ +S G
Sbjct: 346 SVVVTDSGALLAFGWGLYGQCGQGNTDDVLSPTCVSAILGVKMQDVAAGLWHTVSISADG 405
Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
V+ +G GQLG+GS + + +P P LE+ K RS
Sbjct: 406 DVYSFGGNQFGQLGIGSDQAETIPKLVDAPSLEN--------------------KNARS- 444
Query: 291 VKEIACGGRHSAVVTD 306
++CG RHSA++TD
Sbjct: 445 ---VSCGARHSAIITD 457
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V+ G RH+ I++D G+V+ WG+ GQLGLG + +PC+
Sbjct: 445 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMD-----RNVPCI 485
>gi|357125846|ref|XP_003564600.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
1 [Brachypodium distachyon]
Length = 499
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/311 (56%), Positives = 218/311 (70%), Gaps = 25/311 (8%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
KE VV MWGYLPG SP++SP+L+P+P RL GD+W+DVCGGGCGFA+A SESGKL+T
Sbjct: 32 KEQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLT 91
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGS DD GQSY+T+GKH ETPE FPLP++ + +A GWAHCV++TE G VYTWGW+ECV
Sbjct: 92 WGSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECV 151
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP----------------PSDKRAGEEVVK 178
P+ V D S G+ ++D + QSA + Q PS+ R EE K
Sbjct: 152 PTGTVIADQSSVGTLERDES--QSASASNQVSPRSHVSSRTSSGAASGPSESRGAEESTK 209
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
RR+ SSA++ ++ S DE + PC+VT N GVKIT VAAGGRHTL LSD GQVWGWGY
Sbjct: 210 RRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAAGGRHTLALSDFGQVWGWGY 269
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIA 295
GGEGQLGLGSRI+ V +PH IPC+E A GKDRP ++ G+ N+ + + + VK IA
Sbjct: 270 GGEGQLGLGSRIRTVSSPHPIPCIESALYGKDRPAAMK-GNKNAETQISKVMGNCVKAIA 328
Query: 296 CGGRHSAVVTD 306
CGGRHS VVTD
Sbjct: 329 CGGRHSVVVTD 339
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
G+ LSP V+ GVK+ AAG HT+ +S G V+ +G GQLG GS + V
Sbjct: 357 GNTDDVLSPTCVSSILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETV 416
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMS 308
P CLE+ + + ++CG RHSA++TD S
Sbjct: 417 PKLVDASCLENKNA------------------------RTVSCGARHSAIITDES 447
>gi|357125848|ref|XP_003564601.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like isoform
2 [Brachypodium distachyon]
Length = 518
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/330 (53%), Positives = 219/330 (66%), Gaps = 44/330 (13%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATSESGKLIT 74
KE VV MWGYLPG SP++SP+L+P+P RL GD+W+DVCGGGCGFA+A SESGKL+T
Sbjct: 32 KEQVVLMWGYLPGVSPQRSPLLAPVPVRLPLAATGDAWRDVCGGGCGFAMAISESGKLLT 91
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WGS DD GQSY+T+GKH ETPE FPLP++ + +A GWAHCV++TE G VYTWGW+ECV
Sbjct: 92 WGSTDDMGQSYVTAGKHEETPEAFPLPSDVVIARADTGWAHCVAITEEGVVYTWGWKECV 151
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQ------------------------------ 164
P+ V D S G+ ++D + QSA + Q
Sbjct: 152 PTGTVIADQSSVGTLERDES--QSASASNQGESFSALILYRYNKGNSIAVSPRSHVSSRT 209
Query: 165 -----APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ PS+ R EE KRR+ SSA++ ++ S DE + PC+VT N GVKIT VAA
Sbjct: 210 SSGAASGPSESRGAEESTKRRRLSSAKQGPDSSTSSDENLSAPPCIVTFNTGVKITAVAA 269
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
GGRHTL LSD GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A GKDRP ++ G+
Sbjct: 270 GGRHTLALSDFGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYGKDRPAAMK-GN 328
Query: 280 VNSSGKAGR---SYVKEIACGGRHSAVVTD 306
N+ + + + VK IACGGRHS VVTD
Sbjct: 329 KNAETQISKVMGNCVKAIACGGRHSVVVTD 358
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
G+ LSP V+ GVK+ AAG HT+ +S G V+ +G GQLG GS + V
Sbjct: 376 GNTDDVLSPTCVSSILGVKMEGAAAGLWHTVCISVDGDVYSFGGNQFGQLGTGSDEAETV 435
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMS 308
P CLE+ + + ++CG RHSA++TD S
Sbjct: 436 PKLVDASCLENKNA------------------------RTVSCGARHSAIITDES 466
>gi|413951960|gb|AFW84609.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 552
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/313 (55%), Positives = 217/313 (69%), Gaps = 27/313 (8%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 119 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGK 178
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ +V+A AGWAHCV++T+ +VYTWGW+
Sbjct: 179 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWK 238
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P S+ R ++
Sbjct: 239 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDS 296
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
KRRK S A+ E+ S DE + PC+VT + GVKI VAAGGRHTL LSD+GQVWGW
Sbjct: 297 TKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLGQVWGW 356
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKE 293
GYGGEGQLGLGSRI+ V +PH +PC+E A KDRP ++ G+ + G + + V+
Sbjct: 357 GYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMK-GNKAAEGHVSKVLGNCVRA 415
Query: 294 IACGGRHSAVVTD 306
IACGGRHSAVVTD
Sbjct: 416 IACGGRHSAVVTD 428
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 99/266 (37%), Gaps = 58/266 (21%)
Query: 76 GSADDEGQSYLTSGKHG------------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
G+ D + L+ KHG P T +V AAG H +++++ G
Sbjct: 292 GTDDSTKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLG 351
Query: 124 EVYTWGW--------------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V+ WG+ C+ SA T+D SA K + G S +
Sbjct: 352 QVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMKGNKAAEGHVSKVLGN 411
Query: 164 --QAPPSDKRAGEEVVKR-RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+A R V + G+ LSP V+ G+K+ VAAG
Sbjct: 412 CVRAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAG 471
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
HT+ S G V+ +G GQLG GS +P L A S +++
Sbjct: 472 LWHTVCTSVDGDVYSFGGNQFGQLGTGSD-----QAETLPKLVDATSLENK--------- 517
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTD 306
+ ++CG RHSA++TD
Sbjct: 518 ---------NARSVSCGARHSAIITD 534
>gi|413951961|gb|AFW84610.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 588
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 173/313 (55%), Positives = 217/313 (69%), Gaps = 27/313 (8%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 119 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPTAATAAGDGWRDVCGGGCGFAMAISESGK 178
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ +V+A AGWAHCV++T+ +VYTWGW+
Sbjct: 179 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSSVVIVRADAGWAHCVAITDEYDVYTWGWK 238
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------SDKRAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P S+ R ++
Sbjct: 239 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAAAGSSESRGTDDS 296
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
KRRK S A+ E+ S DE + PC+VT + GVKI VAAGGRHTL LSD+GQVWGW
Sbjct: 297 TKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLGQVWGW 356
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYVKE 293
GYGGEGQLGLGSRI+ V +PH +PC+E A KDRP ++ G+ + G + + V+
Sbjct: 357 GYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMK-GNKAAEGHVSKVLGNCVRA 415
Query: 294 IACGGRHSAVVTD 306
IACGGRHSAVVTD
Sbjct: 416 IACGGRHSAVVTD 428
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 100/266 (37%), Gaps = 58/266 (21%)
Query: 76 GSADDEGQSYLTSGKHG------------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
G+ D + L+ KHG P T +V AAG H +++++ G
Sbjct: 292 GTDDSTKRRKLSLAKHGPESSTSSDESLSAPPCVVTFSTGVKIVAVAAGGRHTLALSDLG 351
Query: 124 EVYTWGW--------------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V+ WG+ C+ SA T+D SA K + G S +
Sbjct: 352 QVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYTKDRPSAMKGNKAAEGHVSKVLGN 411
Query: 164 --QAPPSDKRAGEEVVKR-RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+A R V + G+ LSP V+ G+K+ VAAG
Sbjct: 412 CVRAIACGGRHSAVVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGIKMQDVAAG 471
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
HT+ S G V+ +G GQLG GS + P LV S+
Sbjct: 472 LWHTVCTSVDGDVYSFGGNQFGQLGTGSD-----------------QAETLPKLVDATSL 514
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTD 306
+ K RS ++CG RHSA++TD
Sbjct: 515 EN--KNARS----VSCGARHSAIITD 534
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
V+ G RH+ I++D G+V+ WG+ GQLGLG +
Sbjct: 522 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSM 555
>gi|110740523|dbj|BAE98367.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 488
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 211/305 (69%), Gaps = 23/305 (7%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ VVYMWGYLPG SP++SP++SP+ ++ SWKDV GGGCGFA+AT+ESGKLITWG
Sbjct: 30 QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE +VYTWGWREC+P+
Sbjct: 90 STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS--------------DKRAGEEVVKRRKT 182
+V R DS + + TEQ S + R G E K+R+
Sbjct: 150 GRVFRQ------VDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRI 203
Query: 183 SSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGE 263
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLGLGSR+++V +PH IPC+E ++ GK V SV G+ SYVK+IACGGRHS
Sbjct: 264 GQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHS 323
Query: 302 AVVTD 306
AV+TD
Sbjct: 324 AVITD 328
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 25/107 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I +VAAG HT S G V+ +G GQLG G + + +P
Sbjct: 352 LSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEA 411
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE+ VN VK I+CG RH+AV+TD
Sbjct: 412 PNLEN---------------VN---------VKTISCGARHTAVITD 434
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V K A G H +T+ G + T+GW G G + ST + + PT +
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGW-------------GLYGQCGQGSTDDELS-PTCVS 358
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-----------TLSPCLVTLN-PGVK 213
R E T+ A + + A G F TL L N V
Sbjct: 359 SLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVN 418
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ ++ G RHT +++D G+V+ WG+ GQLG+G I
Sbjct: 419 VKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVI 455
>gi|242054967|ref|XP_002456629.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
gi|241928604|gb|EES01749.1| hypothetical protein SORBIDRAFT_03g039710 [Sorghum bicolor]
Length = 503
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 174/315 (55%), Positives = 219/315 (69%), Gaps = 29/315 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL------CGGDSWKDVCGGGCGFALATSESGK 71
KE VV MWGYLPG SP++SP+L P+P RL GD W+DVCGGGCGFA+A SESGK
Sbjct: 32 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAAAAGDGWRDVCGGGCGFAMAISESGK 91
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L+TWGSADD GQSY+T+GKH ETPE FPLP+ ++V+A AGWAHCV++T+ G+VYTWGW+
Sbjct: 92 LLTWGSADDMGQSYVTAGKHEETPEAFPLPSGVAIVRADAGWAHCVAITDEGDVYTWGWK 151
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------------RAGEEV 176
ECVP+ +V D S G+ +KD +Q A+ T+Q P + R ++
Sbjct: 152 ECVPTGRVIGDQSSVGTMEKDE--RQMAMATDQVSPRSQVSRTSSGAASGPPESRGTDDS 209
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL--SDMGQVW 234
KRR+ SSA+ E+ S DE + PC+VT N GVKI VAAGGRHTL L SD+GQVW
Sbjct: 210 TKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVSVAAGGRHTLALSASDLGQVW 269
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR---SYV 291
GWGYGGEGQLGLGSRI+ V +PH +PC+E A KDRP ++ G+ + G + + V
Sbjct: 270 GWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAMK-GNKAAEGHVSKVLGNCV 328
Query: 292 KEIACGGRHSAVVTD 306
+ IACGGRHSAVVTD
Sbjct: 329 RAIACGGRHSAVVTD 343
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ LSP V+ G+K+ VAAG HT+ S G V+ +G GQLG GS
Sbjct: 361 GNTDDVLSPTCVSSILGIKMQDVAAGLWHTVCTSVDGDVYSFGGNQFGQLGTGSD----- 415
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P L A S +++ + ++CG RHSA++TD
Sbjct: 416 QAETVPKLVDATSLENK------------------NARSVSCGARHSAIITD 449
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
V+ G RH+ I++D G+V+ WG+ GQLGLG +
Sbjct: 437 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSM 470
>gi|222631832|gb|EEE63964.1| hypothetical protein OsJ_18789 [Oryza sativa Japonica Group]
Length = 479
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 171/311 (54%), Positives = 215/311 (69%), Gaps = 25/311 (8%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCGGGCGFALATSESGKL 72
KE VV MWGYLPG S ++SP+L P+P R+ GD+W+DV GGGCGFA+A SE GKL
Sbjct: 12 KERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKL 71
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
TWGS DD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T G+VYTWGW+E
Sbjct: 72 FTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKE 131
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---------------RAGEEVV 177
CVP+ +V D + G+ D +QS + T+Q P K R+ E+
Sbjct: 132 CVPTGRVIADHSATGAMDCDK--RQSGVATDQVSPRSKVSRTSTKAASGPAESRSSEDST 189
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
KRR+ SS++ +E+ +S DE + PC+VT N GVKI +VAAGGRHTL+LSD GQVWGWG
Sbjct: 190 KRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQVWGWG 249
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY--VKEIA 295
YGGEGQLGLGSRI+ V +PH IPC++ A KDR +V GS G R+ VK IA
Sbjct: 250 YGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIV-MGSRTLEGTNDRAATCVKAIA 308
Query: 296 CGGRHSAVVTD 306
CGGRHSAVVTD
Sbjct: 309 CGGRHSAVVTD 319
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 100/264 (37%), Gaps = 57/264 (21%)
Query: 77 SADDEGQSYLTSGKHGETPEP------------FPLPTEASVVKAAAGWAHCVSVTEAGE 124
S D + L+S KHG E T +V+ AAG H + +++ G+
Sbjct: 185 SEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQ 244
Query: 125 VYTWGW--------------------RECVPSAKVTRDFGS--AGSFQKDSTGKQSALPT 162
V+ WG+ CV SA ++D GS + T ++A
Sbjct: 245 VWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIVMGSRTLEGTNDRAATCV 304
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ + + + G+ LSP V+ GVKI +VAAG
Sbjct: 305 KAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLW 364
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT+ S G V+ +G GQLG GS ++P L A+
Sbjct: 365 HTVCTSADGDVYSFGGNQFGQLGTGS-----DQAEIVPKLVEAS---------------- 403
Query: 283 SGKAGRSYVKEIACGGRHSAVVTD 306
K ++ + ++CG RHSAV+TD
Sbjct: 404 --KLENNHARGVSCGARHSAVITD 425
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
V+ G RH+ +++D G V+ WG+ GQLGLG T +PC
Sbjct: 413 VSCGARHSAVITDKGDVFCWGWNKYGQLGLGD-----STDRNVPC 452
>gi|15233306|ref|NP_191117.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7076801|emb|CAB75916.1| Regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|332645883|gb|AEE79404.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/305 (56%), Positives = 211/305 (69%), Gaps = 23/305 (7%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ VVYMWGYLPG SP++SP++SP+ ++ SWKDV GGGCGFA+AT+ESGKLITWG
Sbjct: 30 QRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAESGKLITWG 89
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE +VYTWGWREC+P+
Sbjct: 90 STDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPT 149
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS--------------DKRAGEEVVKRRKT 182
+V G DS + + TEQ S + R G E K+R+
Sbjct: 150 GRVF------GQVDGDSCERNISFSTEQVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRI 203
Query: 183 SSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LSD+GQVWGWGYGGE
Sbjct: 204 SPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGE 263
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLGLGSR+++V +PH IPC+E ++ GK V SV G+ SYVK+IACGGRHS
Sbjct: 264 GQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHS 323
Query: 302 AVVTD 306
AV+TD
Sbjct: 324 AVITD 328
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 25/107 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I +VAAG HT S G V+ +G GQLG G + + +P
Sbjct: 352 LSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEA 411
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE+ VN VK I+CG RH+AV+TD
Sbjct: 412 PNLEN---------------VN---------VKTISCGARHTAVITD 434
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V K A G H +T+ G + T+GW G G + ST + + PT +
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGW-------------GLYGQCGQGSTDDELS-PTCVS 358
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-----------TLSPCLVTLN-PGVK 213
R E T+ A + + A G F TL L N V
Sbjct: 359 SLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVN 418
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ ++ G RHT +++D G+V+ WG+ GQLG+G I
Sbjct: 419 VKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVI 455
>gi|218196915|gb|EEC79342.1| hypothetical protein OsI_20201 [Oryza sativa Indica Group]
Length = 484
Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 170/316 (53%), Positives = 217/316 (68%), Gaps = 30/316 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL-----CGGDSWKDVCGGGCGFALATSESGKL 72
KE VV MWGYLPG S ++SP+L P+P R+ GD+W+DV GGGCGFA+A SE GKL
Sbjct: 12 KERVVLMWGYLPGVSQQRSPLLGPVPVRMPDAAAAAGDAWRDVAGGGCGFAMAVSEQGKL 71
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
TWGS DD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T G+VYTWGW+E
Sbjct: 72 FTWGSTDDMGQSYVTAGKHEETPEAFPLPSDIAIVRADAGWAHCVAITGKGDVYTWGWKE 131
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ--------------------APPSDKRA 172
CVP+ +V D + G+ D +QS + T+Q + P++ R+
Sbjct: 132 CVPTGRVIADHSATGAMDCDK--RQSGVATDQGNSITVSPRSKVSRTSTKAASGPAESRS 189
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
E+ KRR+ SS++ +E+ +S DE + PC+VT N GVKI +VAAGGRHTL+LSD GQ
Sbjct: 190 SEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQ 249
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-- 290
VWGWGYGGEGQLGLGSRI+ V +PH IPC++ A KDR +V GS G R+
Sbjct: 250 VWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIV-MGSRTLEGTNDRAATC 308
Query: 291 VKEIACGGRHSAVVTD 306
VK IACGGRHSAVVTD
Sbjct: 309 VKAIACGGRHSAVVTD 324
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 101/264 (38%), Gaps = 57/264 (21%)
Query: 77 SADDEGQSYLTSGKHGETPEP------------FPLPTEASVVKAAAGWAHCVSVTEAGE 124
S D + L+S KHG E T +V+ AAG H + +++ G+
Sbjct: 190 SEDSTKRRRLSSSKHGAESESSSDENLSAPPCVVTFNTGVKIVEVAAGGRHTLVLSDFGQ 249
Query: 125 VYTWGW--------------------RECVPSAKVTRDFGS--AGSFQKDSTGKQSALPT 162
V+ WG+ CV SA ++D GS + T ++A
Sbjct: 250 VWGWGYGGEGQLGLGSRIRTVSSPHPIPCVQSAFYSKDRTGIVMGSRTLEGTNDRAATCV 309
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ + + + G+ LSP V+ GVKI +VAAG
Sbjct: 310 KAIACGGRHSAVVTDSGTLLTFGWGLYGQCGQGNTDDILSPTCVSAIMGVKIQRVAAGLW 369
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT+ S G V+ +G GQLG GS ++P L A+ +++
Sbjct: 370 HTVCTSADGDVYSFGGNQFGQLGTGS-----DQAEIVPKLVEASKLENK----------- 413
Query: 283 SGKAGRSYVKEIACGGRHSAVVTD 306
+ + ++CG RHSAV+TD
Sbjct: 414 -------HARGVSCGARHSAVITD 430
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
V+ G RH+ +++D G V+ WG+ GQLGLG T +PC
Sbjct: 418 VSCGARHSAVITDKGDVFCWGWNKYGQLGLGD-----STDRNVPC 457
>gi|297816858|ref|XP_002876312.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297322150|gb|EFH52571.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 482
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/311 (54%), Positives = 213/311 (68%), Gaps = 21/311 (6%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSE 68
E+ E + +VYMWGYLPG S ++SP++SP+ ++ SWKDV GGGCGFA+AT+E
Sbjct: 18 QEEEEVVGQRLVYMWGYLPGASQQRSPLMSPVEVKIPPAVESSWKDVSGGGCGFAMATAE 77
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SGKLITWGS DD GQSY+TSGKHGETPEPFPLP E V KA AGWAHCV+VTE EVYTW
Sbjct: 78 SGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAEAGWAHCVAVTENQEVYTW 137
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK------------RAGEEV 176
GWREC+P+ +V FG A DS + + TEQ P+ + A E
Sbjct: 138 GWRECIPTGRV---FGQA---DGDSCERNISFSTEQVSPTCQGRKSSGGTSYQVEARGEP 191
Query: 177 VKRRKTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
K+R+ S +++ +EN + D + PCLV+L PGV+I VAAGGRHTL LSD+GQVWG
Sbjct: 192 TKKRRISPSKQAAENASQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWG 251
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WGYGGEGQLGLGSR+++V +PH IPC+E ++ GK V S + SYVK+IA
Sbjct: 252 WGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGVNMSSEVQCARVLGSYVKKIA 311
Query: 296 CGGRHSAVVTD 306
CGGRHSAV+TD
Sbjct: 312 CGGRHSAVITD 322
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 25/107 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
LSP V+ G++I +VAAG HT+ S G V+ +G GQLG G + + +P
Sbjct: 346 LSPTCVSSLLGIRIEEVAAGLWHTICASADGDVYSFGGNQFGQLGTGCDQAETLPKLLEA 405
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE+ VN VK I+CG RH+AV+ D
Sbjct: 406 PNLEN---------------VN---------VKIISCGARHTAVIAD 428
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
V + ++ G RHT +++D G+V+ WG+ GQLGLG I
Sbjct: 411 VNVKIISCGARHTAVIADEGKVFCWGWNKYGQLGLGDVI 449
>gi|222619534|gb|EEE55666.1| hypothetical protein OsJ_04066 [Oryza sativa Japonica Group]
Length = 418
Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 144/261 (55%), Positives = 179/261 (68%), Gaps = 21/261 (8%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A SESGKL+TWGSADD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T+ G
Sbjct: 1 MAISESGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAITDEG 60
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---------------S 168
+VYTWGW+ECVP+ +V D S G+ +KD +QSA+ +Q P S
Sbjct: 61 DVYTWGWKECVPTGRVISDQSSGGTLEKDE--RQSAIAADQVSPRSQVSRTSSGAASGPS 118
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R ++ KRR+ SS + E+ S DE + PC+VT N GVKI VAAGGRHTL LS
Sbjct: 119 ESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTLALS 178
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV---RQGSVNSSGK 285
D+GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A KDRP + + V S
Sbjct: 179 DLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAMKGNKSAEVQISKV 238
Query: 286 AGRSYVKEIACGGRHSAVVTD 306
G VK IACGGRHSAVVTD
Sbjct: 239 MGNC-VKAIACGGRHSAVVTD 258
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ LSP V+ GVK+ + AG HT+ S G V+ +G GQLG GS
Sbjct: 276 GNTDDVLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGS-----D 330
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P L A+S +++ + ++CG RHSA++TD
Sbjct: 331 QAETVPKLVDASSLENK------------------NARAVSCGARHSAIITD 364
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 352 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 390
>gi|218189368|gb|EEC71795.1| hypothetical protein OsI_04422 [Oryza sativa Indica Group]
Length = 427
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/266 (54%), Positives = 182/266 (68%), Gaps = 25/266 (9%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
G+ A ++SGKL+TWGSADD GQSY+T+GKH ETPE FPLP++ ++V+A AGWAHCV++T
Sbjct: 7 GWLAAAAQSGKLLTWGSADDMGQSYVTAGKHEETPEAFPLPSDVAIVRADAGWAHCVAIT 66
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------------- 167
+ G+VYTWGW+ECVP+ +V D S G+ +KD +QSA+ +Q P
Sbjct: 67 DEGDVYTWGWKECVPTGRVISDQSSGGTLEKDE--RQSAIAADQVSPRSQVSRTSSGAAS 124
Query: 168 --SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
S+ R ++ KRR+ SS + E+ S DE + PC+VT N GVKI VAAGGRHTL
Sbjct: 125 GPSESRGTDDSTKRRRLSSTKHAPESSTSSDENLSAPPCVVTFNTGVKIMAVAAGGRHTL 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
LSD+GQVWGWGYGGEGQLGLGSRI+ V +PH IPC+E A KDRP ++ N S +
Sbjct: 185 ALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPIPCIESALYSKDRPAAMKG---NKSAE 241
Query: 286 AGRSY-----VKEIACGGRHSAVVTD 306
A S VK IACGGRHSAVVTD
Sbjct: 242 AQISKVMGNCVKAIACGGRHSAVVTD 267
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ LSP V+ GVK+ + AG HT+ S G V+ +G GQLG GS
Sbjct: 285 GNTDDVLSPTCVSSILGVKMQDIGAGLWHTVCTSVDGDVYSFGGNQFGQLGTGS-----D 339
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P L A+S +++ + ++CG RHSA++TD
Sbjct: 340 QAETVPKLVDASSLENK------------------NARAVSCGARHSAIITD 373
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 361 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 399
>gi|224098477|ref|XP_002311187.1| predicted protein [Populus trichocarpa]
gi|222851007|gb|EEE88554.1| predicted protein [Populus trichocarpa]
Length = 253
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/244 (58%), Positives = 171/244 (70%), Gaps = 19/244 (7%)
Query: 3 MNGSKREENE-KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG 61
MNG ++EE M+ E +VYMWGYLPG P++SPILSP+ R +WKDVCGGGCG
Sbjct: 1 MNGERKEEGVVNMDVHNEKLVYMWGYLPGALPQRSPILSPLAVRSTV-YAWKDVCGGGCG 59
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FA+A SESGKLITWGS DD GQSY+TSGKHGETPE FPLPTEAS+VKAAAGWAHCV+ T
Sbjct: 60 FAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEAFPLPTEASIVKAAAGWAHCVAATG 119
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------------- 167
GEVYTWGW+EC+PS KV D AG +KD +Q+ TEQ P
Sbjct: 120 NGEVYTWGWKECIPSGKVFSDPSGAGGMEKDVFERQNLFFTEQGSPRSQGPRSSGGSGTL 179
Query: 168 --SDKR-AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D R + +E KRR+ SSA++ +E+ ++GDE + PCLVTLNPGV+I V+AGGRHT
Sbjct: 180 SGLDGRGSKDESTKRRRISSAKQAAESSSTGDETPSAFPCLVTLNPGVRIVTVSAGGRHT 239
Query: 225 LILS 228
L LS
Sbjct: 240 LTLS 243
>gi|168016500|ref|XP_001760787.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688147|gb|EDQ74526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 186/296 (62%), Gaps = 24/296 (8%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
MWGYLP SP+++P+L P P + D K VC GGCGF +A SESGKL TWGS + G
Sbjct: 1 MWGYLPAASPQRAPLLQPTPVPVTPLNDPLKTVCNGGCGFGIAISESGKLNTWGSTTELG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q YL SGK E PEP+PLPTE+ +V+AA GWAHC +VT GEV+TWGW ECVPS + T D
Sbjct: 61 QCYLISGKQQELPEPYPLPTESPIVQAAGGWAHCAAVTGGGEVFTWGWSECVPSIQPTPD 120
Query: 143 FGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEVVKRRKTSSAR--EESENPASGDE 197
S KQS T + +D + EE++K+RK S E E+P + +E
Sbjct: 121 ESEQVQGDDASACKQSGRQTHRNLTCKTTDSKGAEEILKKRKIVSFEHGESPESPTAAEE 180
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSD------MGQVWGWGYGGEGQLGLGSRIK 251
PCLV L+PG++I+ VAAGGRHTL LS +G VWGWGYGGEGQLGLG+R++
Sbjct: 181 NVFAPPCLVNLDPGIRISIVAAGGRHTLALSGEFSFKYVGHVWGWGYGGEGQLGLGTRMR 240
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK-AGRSYVKEIACGGRHSAVVTD 306
+V +P LIPC +G ++SSG S +K IACGGRHSA+VTD
Sbjct: 241 IVSSPQLIPCFNSPENG-----------ISSSGAPIPGSSIKAIACGGRHSAIVTD 285
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSPCLV+ G+++T +AAG HTL ++D+G V+ +G GQLG+G + +P LI
Sbjct: 309 LSPCLVSAMGGLQVTGIAAGLWHTLCITDIGDVYAFGGNQFGQLGVGGNSAEM-SPRLI- 366
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
D PLL + V +ACG RHS V+T
Sbjct: 367 ---------DAPLLEDESCV------------AVACGARHSVVLT 390
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
PG I +A GGRH+ I++D G + +G+G GQ+G GS L PCL A G
Sbjct: 266 PGSSIKAIACGGRHSAIVTDAGALLTFGWGLYGQVGQGSN-----EDELSPCLVSAMGG 319
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 25/91 (27%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G RH+++L+ G+++ WG+ GQLGLG + +D P+ V
Sbjct: 379 VACGARHSVVLTGSGKIFAWGWNKYGQLGLGDN-----------------NNRDLPVQV- 420
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
++N G+A IACG H+ +
Sbjct: 421 --TMNDGGRA-----ANIACGWWHTLATVHI 444
>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 177/306 (57%), Gaps = 40/306 (13%)
Query: 10 ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARL-CGGDSWKDVCGGGCGFALATSE 68
EN EC V MWGYLP SP+++P+L P P + D K VC GGCGF +A SE
Sbjct: 7 ENAAAGECS---VRMWGYLPAASPQRTPLLQPTPVPVSVLNDPLKTVCNGGCGFGIAISE 63
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
SG L TWGS D G YL SGK E PE +PLPT++ +V AA GWAHC +VT GEVYTW
Sbjct: 64 SGNLNTWGSTTDHGHCYLISGKQQEVPELYPLPTDSPIVHAAGGWAHCAAVTGDGEVYTW 123
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
GW EC TGKQ+ L + EEV+KRRK + E
Sbjct: 124 GWSECT-----------------KPTGKQT-LRNLACKTTGSDGAEEVIKRRKVITNSAE 165
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS--------DMGQVWGWGYGG 240
++P + +E PCLV L+PG++I+ VAAGGRHTL LS D+GQVWGWGYGG
Sbjct: 166 GQSPEASEENAFAPPCLVKLDPGIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGYGG 225
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
EGQLGLGS I++V P IPC +G R + G SY+K IACGGRH
Sbjct: 226 EGQLGLGSCIRIVSFPQHIPCFNMTDTGNARSGVPIPG----------SYIKAIACGGRH 275
Query: 301 SAVVTD 306
SAV+TD
Sbjct: 276 SAVITD 281
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G+ I +AAG HTL +++ G V+ +G GQLG+G + +P LI
Sbjct: 305 LSPSHVSTLQGLSIVGIAAGLWHTLCITNTGDVYSFGGNQFGQLGVGGNNAEL-SPRLI- 362
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
D PLL + SV +ACG RHS V+T
Sbjct: 363 ---------DAPLLGDELSV------------AVACGARHSVVLT 386
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 25/85 (29%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G RH+++L+ G+++ WG+ GQLGLG + +D P+ V
Sbjct: 375 VACGARHSVVLTGSGKIFAWGWNKYGQLGLGD-----------------CNNRDLPMQV- 416
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHS 301
++N G+A IACG H+
Sbjct: 417 --TMNDGGRA-----ASIACGWWHT 434
>gi|168002036|ref|XP_001753720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695127|gb|EDQ81472.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 478
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/313 (47%), Positives = 181/313 (57%), Gaps = 40/313 (12%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPA-RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V MWGYLP SP+++P+L P P D K VC GGCGF +A SESGKL TWGS +
Sbjct: 17 VRMWGYLPAASPQRAPLLQPTPVPSTPLNDPLKMVCNGGCGFGIAISESGKLNTWGSTTE 76
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ YL SGK E PEP+ LPTE+ +++AA GWAHC +VT GEVYTWGW ECVP+ K
Sbjct: 77 LGQCYLISGKQQEVPEPYSLPTESPIIQAAGGWAHCAAVTGDGEVYTWGWSECVPNIKSN 136
Query: 141 RDFGSAGSFQKDST---GKQSALPTEQ------APPSDKRAGEEVVKRRKTSSA--REES 189
D Q D T G ++L Q S+ + EEV+K+RK S R
Sbjct: 137 PD--ETEQAQGDDTSPSGPNTSLHGRQNHRNLTCKTSESKGAEEVLKKRKVVSFEDRGSP 194
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM----------------GQV 233
E+P + +E PCLV L+PG++I+ VAAGGRHTL LS M V
Sbjct: 195 ESPTAAEENVFAPPCLVILDPGIRISTVAAGGRHTLALSGMYSFSYDLIFPHFGNIYSHV 254
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+GWGYGGEGQLGLGSR ++V TP +PC +G V G + G S V
Sbjct: 255 YGWGYGGEGQLGLGSRTRIVSTPQRVPCFSSLENG------VTIGEASIPG----SCVTR 304
Query: 294 IACGGRHSAVVTD 306
IACGGRHSAV+TD
Sbjct: 305 IACGGRHSAVITD 317
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSPCLV+ G+++ +AAG HTL ++D+G V+ +G GQLG+G +P L+
Sbjct: 342 LSPCLVSAMRGLRVVGIAAGLWHTLCITDIGDVYAFGGNQFGQLGVGGNTAET-SPRLV- 399
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
D PLL + SV +ACG RHS V+T
Sbjct: 400 ---------DAPLLEDETSV------------AVACGARHSVVLT 423
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 25/85 (29%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G RH+++L+ G+++ WG+ GQLGLG ++ +D P+ V
Sbjct: 412 VACGARHSVVLTGSGKIFAWGWNKYGQLGLGD-----------------SNNRDLPVQV- 453
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHS 301
++N G+A IACG H+
Sbjct: 454 --TMNDGGRA-----ASIACGWWHT 471
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 203 PCLVTLNPGVKI----------TKVAAGGRHTLILSDMGQV--WGWGYGGEGQLGLGSRI 250
PC +L GV I T++A GGRH+ +++D G + +GWG G+ Q+G GS
Sbjct: 281 PCFSSLENGVTIGEASIPGSCVTRIACGGRHSAVITDAGALLTFGWGLYGQ-QVGQGST- 338
Query: 251 KMVPTPHLIPCLEHAASG 268
L PCL A G
Sbjct: 339 ----EDELSPCLVSAMRG 352
>gi|168037867|ref|XP_001771424.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677342|gb|EDQ63814.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 465
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 176/299 (58%), Gaps = 29/299 (9%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
MWGYLP SP+++P+L P + D K VC GGCGF + SESGKL TWGS + G
Sbjct: 1 MWGYLPAASPQRTPLLHPTLVPITALDDPLKIVCNGGCGFGIGISESGKLNTWGSTTELG 60
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q YL SGK E PEP+ LPT++ +++AA GWAHC +VT GEVYTWGW ECVPS +
Sbjct: 61 QCYLISGKQQEVPEPYLLPTDSPIIQAAGGWAHCAAVTGNGEVYTWGWSECVPSVTLNAV 120
Query: 143 FGS-------------AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-- 187
S S Q S +A +E P S EEV+K+RK S +
Sbjct: 121 EESEQVQEDDIPPDVPGTSLQLLSRNNVNAARSEPLPSS---VVEEVLKKRKVVSFEDGG 177
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
E+P + DE P LV L+ G++I VAAGGRHTL LSD+G VW WGYGG+GQLGLG
Sbjct: 178 SPESPTAADENVFSPPFLVNLDAGIRIASVAAGGRHTLALSDVGHVWAWGYGGDGQLGLG 237
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
SR+++V +P IPCL V + V GK +K IACGGRHSAVVTD
Sbjct: 238 SRMRIVSSPQQIPCLNLTEKA------VARSGVPIPGKC----IKAIACGGRHSAVVTD 286
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSPC V+ G++I +AAG HTL ++D+G V+ +G GQLG+G + +P +I
Sbjct: 310 LSPCCVSTIGGLRIVGIAAGLWHTLCITDVGDVYAFGGNQFGQLGVGGNAAEL-SPRMI- 367
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
D PLL + V E+ACG RHSAV+T
Sbjct: 368 ---------DAPLLEDESCV------------EVACGARHSAVLT 391
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 112/308 (36%), Gaps = 67/308 (21%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+ +++ P L G V GG LA S+ G + WG D + +
Sbjct: 183 TAADENVFSPPFLVNLDAGIRIASVAAGG-RHTLALSDVGHVWAWGYGGDGQLGLGSRMR 241
Query: 91 HGETPEPFP-------------LPTEASVVKA-AAGWAHCVSVTEAGEVYTWGWRECVPS 136
+P+ P +P +KA A G H VT+AG + T+GW
Sbjct: 242 IVSSPQQIPCLNLTEKAVARSGVPIPGKCIKAIACGGRHSAVVTDAGALLTFGW------ 295
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
G G + ST + + P + R T + + A G
Sbjct: 296 -------GLHGQVGQGSTEDELS-PCCVSTIGGLRIVGIAAGLWHTLCITDVGDVYAFGG 347
Query: 197 EFF----------TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
F LSP ++ L +VA G RH+ +L+ G+++ WG+ GQL
Sbjct: 348 NQFGQLGVGGNAAELSPRMIDAPLLEDESCVEVACGARHSAVLTGSGKIFAWGWNKYGQL 407
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
GLG + +D P+ Q ++N G+A IACG H+
Sbjct: 408 GLGD-----------------CNNRDLPV---QVTMNDGGRA-----ASIACGWWHTLAS 442
Query: 305 TDMSYPIA 312
M+ P+A
Sbjct: 443 VHMT-PLA 449
>gi|302765727|ref|XP_002966284.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
gi|300165704|gb|EFJ32311.1| hypothetical protein SELMODRAFT_85679 [Selaginella moellendorffii]
Length = 453
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/307 (46%), Positives = 183/307 (59%), Gaps = 26/307 (8%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK 71
+++ ++ V MWGYLP +SP++SPI+ P D W+ VC GGCGFALA SESGK
Sbjct: 2 EIQGTRKLGVRMWGYLPASSPQRSPIVVPTKVSPASPDDGWRAVCSGGCGFALALSESGK 61
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L TWGS DD GQ Y SGKH E PEPFPL T ++ AAAGWAHC VTE GEVYTWGW+
Sbjct: 62 LHTWGSTDDLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWK 120
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSAL-----PTEQAPPSDKRAGEEVVKRRKTSSAR 186
ECVPS K + G +G D G+ L + +P A + K+RK S+
Sbjct: 121 ECVPSDKNCVEQGVSGD-PYDYQGRTEELKHVEPDLDSSPGHSPEALLDSSKKRKVST-- 177
Query: 187 EESENPASG----DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS---DMGQVWGWGYG 239
+E+ +P S DE C V + K+ VA GGRHT +L D GQVW WGYG
Sbjct: 178 DEAGSPDSSGAGVDEAVVAPLCCVPMP--AKVILVATGGRHTFVLFRILDTGQVWSWGYG 235
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
GEGQLGLG+R++ V +P IP LE + +R+G+ + K SY+ IACGGR
Sbjct: 236 GEGQLGLGTRMRTVSSPQPIP-LEPST------YWLRKGNRAGAVKPPGSYIVGIACGGR 288
Query: 300 HSAVVTD 306
HSA++TD
Sbjct: 289 HSAILTD 295
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G+ +T +A+G HTL ++D G+V+ +G GQLG+G +P
Sbjct: 319 LSPNYVSSLGGLHVTAIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHS-----ETLP 373
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L AA +D K ++CG RHSA+ T+
Sbjct: 374 KLVEAAVLEDE------------------CAKSVSCGARHSAITTE 401
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
V+ G RH+ I ++ G+V+ WG+ GQLGLG TPH +P LEH A
Sbjct: 389 VSCGARHSAITTEKGKVFCWGWNKYGQLGLGDTGDR-DTPHEVP-LEHRA 436
>gi|302793045|ref|XP_002978288.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
gi|300154309|gb|EFJ20945.1| hypothetical protein SELMODRAFT_108548 [Selaginella moellendorffii]
Length = 454
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 142/305 (46%), Positives = 183/305 (60%), Gaps = 21/305 (6%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCG-GDSWKDVCGGGCGFALATSESGK 71
+++ ++ V MWGYLP +SP++SPI+ P D W+ VC GGCGFALA SESGK
Sbjct: 2 EIQGTRKLGVRMWGYLPASSPQRSPIVVPTKVSPASPDDGWRAVCSGGCGFALALSESGK 61
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
L TWGS DD GQ Y SGKH E PEPFPL T ++ AAAGWAHC VTE GEVYTWGW+
Sbjct: 62 LHTWGSTDDLGQCYHISGKHQEHPEPFPLQTPPAIF-AAAGWAHCAVVTETGEVYTWGWK 120
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSAL-----PTEQAPPSDKRAGEEVVKRRKTSSAR 186
ECVPS K + G +G D G+ L + +P A + K+RK S+
Sbjct: 121 ECVPSDKNCVEQGVSGD-PYDYQGRTEELKHVEPDLDSSPGHSPEARLDSSKKRKVSTDE 179
Query: 187 EES-ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS----DMGQVWGWGYGGE 241
S ++P +G + ++P P K+ VA GGRHTL L+ GQVW WGYGGE
Sbjct: 180 AGSPDSPGAGVDEAVVAPLCCVPMP-AKVILVATGGRHTLALTGKFFHTGQVWSWGYGGE 238
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLGLG+R++ V +P IP LE + +R+G+ + K SY+ IACGGRHS
Sbjct: 239 GQLGLGTRMRTVSSPQPIP-LEPST------YWLRKGNRAGAVKPPGSYIVGIACGGRHS 291
Query: 302 AVVTD 306
A++TD
Sbjct: 292 AILTD 296
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 23/106 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G+ +T +A+G HTL ++D G+V+ +G GQLG+G +P
Sbjct: 320 LSPNYVSSLGGLHVTAIASGLWHTLCITDTGEVYAFGGNQFGQLGVGGDHS-----ETLP 374
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L AA +D K ++CG RHSA+ T+
Sbjct: 375 KLVEAAVLEDE------------------CAKSVSCGARHSAITTE 402
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
V+ G RH+ I ++ G+V+ WG+ GQLGLG TPH +P LEH A
Sbjct: 390 VSCGARHSAITTEKGKVFCWGWNKYGQLGLGDTGDR-DTPHEVP-LEHRA 437
>gi|224112701|ref|XP_002316265.1| predicted protein [Populus trichocarpa]
gi|222865305|gb|EEF02436.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 143/203 (70%), Gaps = 18/203 (8%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
MWGYLPG P++SPI SP+ R +WKDVCGGGCGFA+A SESGKLITWGS DD GQ
Sbjct: 1 MWGYLPGALPQRSPISSPLAVRSTV-YAWKDVCGGGCGFAMAISESGKLITWGSTDDLGQ 59
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
SY+TSGKHGETPE FPLPTEAS+V+AAAGWAHCV+ T+ GEVYTWGW+EC+PS KV D
Sbjct: 60 SYVTSGKHGETPEAFPLPTEASIVEAAAGWAHCVAATDTGEVYTWGWKECIPSGKVFGDP 119
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPS----------------DKR-AGEEVVKRRKTSSAR 186
AG KD+ +Q+ TEQ P D R +G+E KRR+ +SA+
Sbjct: 120 SGAGGSAKDAFERQNLFFTEQVSPRSQGSRSSSGSGTFSGVDGRGSGDESTKRRRIASAK 179
Query: 187 EESENPASGDEFFTLSPCLVTLN 209
+ +E+ ++GDE + PCLVTLN
Sbjct: 180 QAAESSSAGDETLSALPCLVTLN 202
>gi|414879725|tpg|DAA56856.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 431
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 165/273 (60%), Gaps = 51/273 (18%)
Query: 82 GQSYLTSGKH-----------------------------GETPEPFPLPTEASVVKAAAG 112
GQSY+T+GKH ETPE FPLP ++V+A AG
Sbjct: 2 GQSYVTAGKHEVITLMLSCFPAPCEKVQDLLLKIEYYTSQETPEAFPLPRGVAIVRADAG 61
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-------- 164
WAHCV++T+ G+VYTWGW+ECVP+ +V D S G+ +KD +Q A+ T+Q
Sbjct: 62 WAHCVAITDEGDVYTWGWKECVPTGRVIGDQSSVGTKEKDE--RQMAMATDQGVSPRSQV 119
Query: 165 --------APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ PS+ R ++ KRR+ SSA+ E+ S DE + PC+VT N GVKI
Sbjct: 120 SRTSSGAASGPSESRGTDDSTKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVS 179
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VAAGGRHTL LSD+GQVWGWGYGGEGQLGLGSRI+ V +PH +PC+E A KDRP ++
Sbjct: 180 VAAGGRHTLALSDLGQVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAMK 239
Query: 277 QGSVNSSGKAGR---SYVKEIACGGRHSAVVTD 306
G+ + G + + V+ IACGGRHSA VTD
Sbjct: 240 -GNKAAEGHVSKVLGNCVRAIACGGRHSAAVTD 271
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 99/266 (37%), Gaps = 58/266 (21%)
Query: 76 GSADDEGQSYLTSGKHG------------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
G+ D + L+S KHG P T +V AAG H +++++ G
Sbjct: 135 GTDDSTKRRRLSSAKHGPESSTSSDESLSAPPCVVTFNTGVKIVSVAAGGRHTLALSDLG 194
Query: 124 EVYTWGW--------------------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+V+ WG+ C+ SA ++D SA K + G S +
Sbjct: 195 QVWGWGYGGEGQLGLGSRIRTVSSPHPVPCIESALYSKDRPSAMKGNKAAEGHVSKVLGN 254
Query: 164 --QAPPSDKRAGEEVVKR-RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+A R V + G+ LSP V+ G K+ VAAG
Sbjct: 255 CVRAIACGGRHSAAVTDSGALLTFGWGLYGQCGQGNTDDVLSPTCVSSILGSKMQDVAAG 314
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
HT+ S G V+ +G GQLG GS +P L A S +++
Sbjct: 315 LWHTVCTSVDGDVYSFGGNQFGQLGTGSD-----QAETVPKLVDATSLENK--------- 360
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTD 306
+ ++CG RHSA++TD
Sbjct: 361 ---------NARSVSCGARHSAIITD 377
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
V+ G RH+ I++D G+V+ WG+ GQLGLG + + VP
Sbjct: 365 VSCGARHSAIITDEGEVFCWGWNKYGQLGLGDSMDRNVP 403
>gi|357460951|ref|XP_003600757.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489805|gb|AES71008.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 260
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 88/113 (77%), Gaps = 11/113 (9%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
PCLVTLNPGVKIT VAAGGRHTL+LSD+GQVWGWGYGGEGQLGLGSR++MV +PH+IPC+
Sbjct: 2 PCLVTLNPGVKITSVAAGGRHTLVLSDIGQVWGWGYGGEGQLGLGSRVRMVSSPHIIPCI 61
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGR---SYVKEIACGGRHSAVVTDMSYPIA 312
+ ++ + QGS++S G R S +K IACGGRHSAV+TD +A
Sbjct: 62 DSSS--------LVQGSMSSEGHNFRIPGSCIKAIACGGRHSAVITDAGAVLA 106
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 27/108 (25%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LSP V+ G++I VAAG HT+ S G V+ +G GQLG GS + P L+
Sbjct: 124 LSPTCVSSLLGIQIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSD-QAETLPRLLD 182
Query: 261 C--LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
C LE+ VN VK I+CG RH+A+VTD
Sbjct: 183 CPSLEN---------------VN---------VKTISCGARHTALVTD 206
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V + ++ G RHT +++D G+V+ WG+ GQLGLG I + +P+
Sbjct: 189 VNVKTISCGARHTALVTDNGKVFSWGWNKYGQLGLGDVIDRNIPS 233
>gi|224112699|ref|XP_002316264.1| predicted protein [Populus trichocarpa]
gi|222865304|gb|EEF02435.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 69/83 (83%), Gaps = 4/83 (4%)
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+SD+GQVWGWGYGGEGQLGLGSRI+MV +PH IPC++ +A GKDR +++ +G + S G++
Sbjct: 8 VSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHPIPCID-SAYGKDRAVVLSRGGMTSEGQS 66
Query: 287 GR---SYVKEIACGGRHSAVVTD 306
R S+VK IACGGRHSAV+TD
Sbjct: 67 FRVPGSHVKGIACGGRHSAVITD 89
>gi|218189367|gb|EEC71794.1| hypothetical protein OsI_04421 [Oryza sativa Indica Group]
Length = 73
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARL---CGGDSWKDVCGGGCGFALATS 67
KE VV MWGYLPG SP++SP+L P+P RL GGD W+DVCGGGCGFA+A S
Sbjct: 17 KERVVLMWGYLPGVSPQRSPLLGPVPVRLPAAAGGDGWRDVCGGGCGFAMAIS 69
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 54/234 (23%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWA 114
CG+ ++A + +G ++ WG D S L G+ + PFP P A ++ + G
Sbjct: 1548 ACGYQHSVAITYAGTVLAWG---DNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSE 1604
Query: 115 HCVSVTEAGEVYTWGWRE----------CVPSAKVTR-------DFGSAGSFQKDSTGKQ 157
H +++ G+V++WG E PS K+ DF G G
Sbjct: 1605 HTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCG-------GLH 1657
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP------- 210
S + T+ R+ S R E + FT C +T
Sbjct: 1658 SLVLTKN--------------RQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLE 1703
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT--PHLIPCL 262
GV + ++AAG H+L L+ GQV+GWGY GQ+GLG + P P LIP L
Sbjct: 1704 GVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKL 1757
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 62/252 (24%), Positives = 88/252 (34%), Gaps = 105/252 (41%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEP------------FP---LPTEASVVKAAA-GW 113
G + +WG T G+ G +P FP +P + ++V + A G+
Sbjct: 1500 GVMFSWGQN--------TEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGY 1551
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H V++T AG V WG D++ Q L E++P
Sbjct: 1552 QHSVAITYAGTVLAWG----------------------DNSHSQLGL-GEKSP------- 1581
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
S F T P L I V+ G HTL L +GQV
Sbjct: 1582 --------------------SSVPFPTPIPALTN------IQSVSCGSEHTLALDYIGQV 1615
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ WG G G LG G+ + P+P +I L+ +N V
Sbjct: 1616 FSWGNGEGGLLGHGNE-DVCPSPKIIEALK---------------GLN---------VDF 1650
Query: 294 IACGGRHSAVVT 305
I CGG HS V+T
Sbjct: 1651 IVCGGLHSLVLT 1662
>gi|426248720|ref|XP_004018107.1| PREDICTED: RCC1 domain-containing protein 1 [Ovis aries]
Length = 307
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 39/197 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG+ G+HG+ PEP P EA + +
Sbjct: 97 GAEHALLLDAAGQVFSWGA-----------GRHGQLGHGTLEPEPEPRLLEALQGLRMAE 145
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E A T+ G K + G+ S L +
Sbjct: 146 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLDED----- 197
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 198 ----GSEV---KRVSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 247
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 248 RTGELYTWGWGKYGQLG 264
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 183 SSAREESENPASGDE----FFTLSPCLVT-----------LNPGVKITKVAAGGRHTLIL 227
S A +E+E+ + DE L PC L P ++ ++ G H L+L
Sbjct: 45 SHAVQEAEHGPNRDETQAGLLPLLPCARAYVSPRPSFYRPLAPTLRARRLELGAEHALLL 104
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
GQV+ WG G GQLG G+ ++ P P L+ L+
Sbjct: 105 DAAGQVFSWGAGRHGQLGHGT-LEPEPEPRLLEALQ 139
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 31/125 (24%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---------------- 246
P L+ G+++ +VAAGG H++ LS+ G ++ WG+ GQL L
Sbjct: 132 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAGEA 191
Query: 247 ------GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GS +K V G P + Q + S +++CG RH
Sbjct: 192 SGLDEDGSEVKRVSA---------GEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRH 242
Query: 301 SAVVT 305
+AV+T
Sbjct: 243 TAVLT 247
>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
strain 10D]
Length = 457
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 102/238 (42%), Gaps = 39/238 (16%)
Query: 60 CG--FALATSESGKLITWGSADD-------EGQSYL----------TSGKHGETPEPFPL 100
CG A S G+L +WG + E +S+L G+ G +
Sbjct: 137 CGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAI 196
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRD-FGSA- 146
P+E +V G+ H V+++ G VYT GW E A RD G+A
Sbjct: 197 PSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSLLAVTFRDEHGNAL 256
Query: 147 ---GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
+ S + + + T+ + E S +E +ENP S F+ P
Sbjct: 257 PNLRIIKVASGDRHTLVLTDDGRIYGFGSNEYGQLGITMSCDQETAENPTSKQCVFS-EP 315
Query: 204 CLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+T G +I ++A G RH++ LSD G+V WG+G GQLGLG I M PTP ++
Sbjct: 316 RLLTGGALAGRRIAQIACGERHSVALSDQGEVICWGHGMSGQLGLGESITMTPTPQIL 373
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+ +VA GG HT IL G ++ G+G GQLGLG RI+ V P
Sbjct: 63 HVLQVACGGSHTAILLRNGALYTVGHGLYGQLGLGQRIRRVSLP 106
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 37/261 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG F+ A ++SG+L TWG +++GQ L + TP+ + ++V G H
Sbjct: 219 GGWAFSAAVTKSGRLYTWG-FNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHIC 277
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAG-----SFQKDSTGKQSALPTEQAPPSDKRA 172
++T+ GEVY+WG FG G S+ +Q E+ +
Sbjct: 278 AITDQGEVYSWGLGV----------FGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGS 327
Query: 173 GEEVVKRRK------------TSSAREESENPASG--DEFFTLS-PCLVTLNPGVKITKV 217
+V+ + + EE+++ G D F S P +V KI V
Sbjct: 328 NFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNV 387
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL--EHAAS---GKDRP 272
A G HT++++D +V+ WG+G G LGLG++ + P LI L E AS G+
Sbjct: 388 ACGHLHTIVVTDENEVYQWGWGSSGALGLGNK-RFQLVPQLITSLSGEEIASITAGEKHT 446
Query: 273 LLVRQGSVNSSGKAGRSYVKE 293
++VR V S +S + E
Sbjct: 447 IVVRCSDVTSFAYDYKSLINE 467
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 30/113 (26%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG------SRIKMVP 254
L P ++ G +I + +G H+L +S G V+ WG EGQLG+G ++ V
Sbjct: 23 LEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVA 82
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
P LI L+H + ++ACG HS +TDM
Sbjct: 83 KPTLIKSLQHER------------------------IIKVACGNFHSLALTDM 111
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 59 GCGFALATSESGKLITWGSADD----EGQSYLTSGKHGETPEPFPLPT--EASVVKAAAG 112
G +LA S G + +WG + + GQ Y S K +P + + ++K A G
Sbjct: 42 GEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACG 101
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--------SFQKDSTGKQSALPTEQ 164
H +++T+ G+VY WG + ++ + D S S Q+ S + +
Sbjct: 102 NFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRLSSQRIIEASVSQYLSGE 161
Query: 165 APPSDKRAG----EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
D G ++ + ++SA+ +S++ + P + P ++ V+ G
Sbjct: 162 KKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPE-EVVDVSGG 220
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ ++ G+++ WG+ +GQLGLG+R TP L+ L
Sbjct: 221 WAFSAAVTKSGRLYTWGFNEKGQLGLGNRW-FHSTPQLVKTL 261
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 89/235 (37%), Gaps = 46/235 (19%)
Query: 89 GKHGETPEPFPLPTE---ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
GK + + P+ + VV + GWA +VT++G +YTWG+ E R F S
Sbjct: 194 GKIIDLNQTIPMQIQDIPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHS 253
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF------ 199
P D V R+ + ++ E + G F
Sbjct: 254 T--------------PQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHG 299
Query: 200 ----TLSP----CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
L P V LN +I +VA G T++ S G ++ +G+G GQLG
Sbjct: 300 NVKSYLHPKKIQQFVELNE--RIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTE--- 354
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
T HL G+D V S + + +K +ACG H+ VVTD
Sbjct: 355 --ETQHL------DFGGRDNHFKYSIPIVVKSLETKK--IKNVACGHLHTIVVTD 399
>gi|260826736|ref|XP_002608321.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
gi|229293672|gb|EEN64331.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
Length = 364
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 48/230 (20%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
+ M G + T+P +P+P L G+ K VC CG +LA + SG++ +WG+
Sbjct: 144 ITMLGDVQSTNP------TPLPVYL--GEKVKAVC---CGKEHSLALTLSGRVFSWGNGS 192
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
GQ + + TP+ ++V AAG H VSV+ G++Y WGW E
Sbjct: 193 -RGQLGHGTTEASNTPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGWNE------- 244
Query: 140 TRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
Q LPT + PSD + S + +N A +
Sbjct: 245 ---------------AGQLGLPTSKHKTGPSDHKP--------SISEMGHQGDNVA--EV 279
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+P +V + G +++KV+ G RHT L+ GQ+ WG+G GQLG G
Sbjct: 280 LVQATPTIVDMPAGQEVSKVSCGSRHTAALTRDGQLLTWGWGAYGQLGNG 329
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIP 260
+P ++ GV + +AAGG H++ +S G ++ WG+ GQLGL S+ K P+ H
Sbjct: 206 TPQVIEALEGVTMVTIAAGGWHSVSVSAFGDLYVWGWNEAGQLGLPTSKHKTGPSDHKPS 265
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
E G + ++ Q + V +++CG RH+A +T
Sbjct: 266 ISEMGHQGDNVAEVLVQATPTIVDMPAGQEVSKVSCGSRHTAALT 310
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ V G H+L L+ G+V+ WG G GQLG G+ + TP +I LE
Sbjct: 163 GEKVKAVCCGKEHSLALTLSGRVFSWGNGSRGQLGHGT-TEASNTPQVIEALE 214
>gi|296475513|tpg|DAA17628.1| TPA: CG6678-like [Bos taurus]
Length = 377
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG+ G+HG+ EP P EA + +
Sbjct: 167 GAEHALLLDAAGQVFSWGA-----------GRHGQLGHGTLEAEPEPRLLEALQGLRMAE 215
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E A T+ G K + G+ S L +
Sbjct: 216 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLEED----- 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 268 ----GSEV---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 317
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 318 RTGELYTWGWGKYGQLG 334
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 41/200 (20%)
Query: 89 GKHGETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G+ +PEP P V + +A W++ VT G V +++ G
Sbjct: 26 GRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRV------------QLSGAAGGTA 73
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR---------EESENPASGDE- 197
D+ + L +A P AG E+ S+ R +E+E+ S DE
Sbjct: 74 DGCTDAWASEELLVLLRAGPG---AGAELQAWAPGSAMRGDPLWSQAVQEAEHGPSRDET 130
Query: 198 ---FFTLSPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
L PC L P ++ ++ G H L+L GQV+ WG G GQ
Sbjct: 131 QAGLLPLLPCARAYVSPRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQ 190
Query: 244 LGLGSRIKMVPTPHLIPCLE 263
LG G+ ++ P P L+ L+
Sbjct: 191 LGHGT-LEAEPEPRLLEALQ 209
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 31/125 (24%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+++ +VAAGG H++ LS+ G ++ WG+ GQL L PT L
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLAL-------PTKSLAE-- 252
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRH 300
+ + + L GS G AG S +++CG RH
Sbjct: 253 DGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRH 312
Query: 301 SAVVT 305
+AV+T
Sbjct: 313 TAVLT 317
>gi|329664574|ref|NP_001192921.1| RCC1 domain-containing protein 1 [Bos taurus]
Length = 377
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 39/197 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG+ G+HG+ EP P EA + +
Sbjct: 167 GAEHALLLDAAGQVFSWGA-----------GRHGQLGHGTLEAEPEPRLLEALQGLRMAE 215
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E A T+ G K + G+ S L +
Sbjct: 216 VAAGGWHSVCLSETGDIYIWGWNESGQLALPTKSLAEDG---KTTAGEASGLEED----- 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 268 ----GSEV---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 317
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 318 RTGELYTWGWGKYGQLG 334
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 41/200 (20%)
Query: 89 GKHGETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G+ +PEP P V + +A W++ VT G+V +++ G
Sbjct: 26 GRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGQV------------QLSGAAGGTA 73
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR---------EESENPASGDE- 197
D+ + L +A P AG E+ S+ R +E+E+ S DE
Sbjct: 74 DGCTDAWASEELLVLLRAGPG---AGAELQAWAPGSAMRGDPLWSQAVQEAEHGPSRDET 130
Query: 198 ---FFTLSPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
L PC L P ++ ++ G H L+L GQV+ WG G GQ
Sbjct: 131 QAGLLPLLPCARAYVSPRPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGAGRHGQ 190
Query: 244 LGLGSRIKMVPTPHLIPCLE 263
LG G+ ++ P P L+ L+
Sbjct: 191 LGHGT-LEAEPEPRLLEALQ 209
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 31/125 (24%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+++ +VAAGG H++ LS+ G ++ WG+ GQL L PT L
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQLAL-------PTKSLAE-- 252
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRH 300
+ + + L GS G AG S +++CG RH
Sbjct: 253 DGKTTAGEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRH 312
Query: 301 SAVVT 305
+AV+T
Sbjct: 313 TAVLT 317
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 106/270 (39%), Gaps = 57/270 (21%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + K+ VY G G S S + LC D CG G LA
Sbjct: 34 NEALLVMKDKSVYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSG-PHVLAL 92
Query: 67 SESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEAS------VVKAAAGWAHC 116
+E G++ +WG SY G G TP +PT + +V A G H
Sbjct: 93 TEKGEVYSWGH-----NSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHS 147
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---SDKRAG 173
+++TE GEVY WG C G GS + T Q P + AG
Sbjct: 148 LALTEEGEVYAWGQNNC----------GQVGS----------NISTNQGSPRQVTSNLAG 187
Query: 174 EEVVKRR--KTSSAREESENPASG------------DEFFTLSPCLVTLNPGVKITKVAA 219
+++V +TSS G + ++P V GV I KVA
Sbjct: 188 KKIVHISCGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYVNQMTPSRVGSLIGVVIIKVAC 247
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G HTL LSD G+++ WG GQLG+G++
Sbjct: 248 GYAHTLALSDEGKLYVWGGNSYGQLGIGNK 277
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 30/112 (26%)
Query: 201 LSPCLV---TLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
L+P LV TL G+ I VA G H+L L++ G+V+ WG GQ+G
Sbjct: 118 LTPILVNIPTLGAGLNMKCIVDVACGSHHSLALTEEGEVYAWGQNNCGQVG--------- 168
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ ++ + P RQ + N +GK + I+CG S VVTD
Sbjct: 169 --------SNISTNQGSP---RQVTSNLAGKK----IVHISCGQTSSMVVTD 205
>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
vitripennis]
Length = 533
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
LA + G++ +WG G L +G G TP E V A G H V++T
Sbjct: 89 VLALTNKGEIYSWG---HNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALT 145
Query: 121 EAGEVYTWGWREC-VPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPSDKRAGEEVVK 178
E GEVY+WG C S+ ++ + G+ TGK ++ Q EV
Sbjct: 146 EDGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFG 205
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ G+ LSPC VT G+ I KVA G HTL LSD G ++ WG
Sbjct: 206 WGYNGVGQ-----LGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGALYVWGG 260
Query: 239 GGEGQLGLGSR 249
G GQLGLG++
Sbjct: 261 NGFGQLGLGNK 271
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 141/352 (40%), Gaps = 84/352 (23%)
Query: 5 GSKREENEKMEECKETVVYMWGY----LPGTSPEKSPI-LSPIPARLCGGDSWKDV-CGG 58
G KR+EN+ + K + WGY PGTS PI L P + S K+V CGG
Sbjct: 43 GGKRQENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGG 102
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
L E G++ T G + +GQ L K G PE + ++ A G +H ++
Sbjct: 103 NHSIFLL--EDGEVYTCG-VNTKGQ--LGHEKEGSKPEQIGALADQHIIHVACGESHSLA 157
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+++ G +++WG GS G +T A+P K+ +E++
Sbjct: 158 LSDQGRLFSWGA-------------GSDGQLGLTTTEDSVAVPR-----LIKKLNQEMI- 198
Query: 179 RRKTSSAREESENPASGDEFFT------------------LSPCLVTLNPGVKITKVAAG 220
+ S A+ +FF SP V G+ + +VAAG
Sbjct: 199 -LQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAG 257
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPTPHLIPCLEHAASGKDR- 271
G H+ LS G V+GWG GQLGL +K++ T ++ + + G D
Sbjct: 258 GAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVV----YISCGSDHT 313
Query: 272 PLLVRQGSV-----NSSGKAGR-----------------SYVKEIACGGRHS 301
+L + G V S G+ G S V +IACG +H+
Sbjct: 314 AVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHT 365
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 110/272 (40%), Gaps = 76/272 (27%)
Query: 18 KETVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
K+ V+ WGY GT E L P + G+ V G L G
Sbjct: 209 KDGRVWTWGYGIDGQLGHNGTEDE----LKPKELTVIRGEGISRVTCGTDFTGLLNETEG 264
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+L T+G+ + GQ L G+ G EP +P + +V + AAG AH +++T+ G+ ++WGW
Sbjct: 265 RLFTFGNGE-AGQ--LGHGERGLCLEPSVVPLD-NVKEVAAGGAHMLALTKDGQAWSWGW 320
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
E D R G
Sbjct: 321 GE------------------------------------DGRLGH---------------- 328
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ ++F P + TL P V + V+AGG H+L L++ GQV+GWG+ G+LGLG+
Sbjct: 329 --GATEDFLKPEP-IPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNE- 384
Query: 251 KMVPTPHLIPCLE-----HAASGKDRPLLVRQ 277
V TP LI L A G D L + Q
Sbjct: 385 SSVMTPTLIKALADKRVLRAICGLDHSLFITQ 416
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 43/274 (15%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A S++G++ WG+++ GQ+ L + + P + S+V + G H +V++ G
Sbjct: 153 IALSKNGEVYIWGNSE-FGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDG 211
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP----SDKRAGEEVVKR 179
V+TWG+ + G G+ + + + + E +D +
Sbjct: 212 RVWTWGY-------GIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEG 264
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
R + E+ G+ L P +V L+ + +VAAGG H L L+ GQ W WG+G
Sbjct: 265 RLFTFGNGEAGQLGHGERGLCLEPSVVPLD---NVKEVAAGGAHMLALTKDGQAWSWGWG 321
Query: 240 GEGQLGLGSR---IKMVPTPHLIP---CLEHAASGKDRPLLVRQGSV-----NSSGKAGR 288
+G+LG G+ +K P P L P + +A G L G V N+SG+ G
Sbjct: 322 EDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGL 381
Query: 289 ---------SYVKEIA--------CGGRHSAVVT 305
+ +K +A CG HS +T
Sbjct: 382 GNESSVMTPTLIKALADKRVLRAICGLDHSLFIT 415
>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 102 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 160
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 161 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 217
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 218 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 263
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + + I +V G HTL LSD G
Sbjct: 264 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 323
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 324 LYAWGANSHGQLGIGNK 340
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 126 TGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 184
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T + C+E LL ++ V ++ACG HS +T
Sbjct: 185 -GTTPVQVCME---------LLSKK-------------VIQVACGSHHSMALT 214
>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
Length = 530
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 148 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + + I +V G HTL LSD G
Sbjct: 194 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 253
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 254 LYAWGANSHGQLGIGNK 270
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 56 TGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 114
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T + C+E LL ++ V ++ACG HS +T
Sbjct: 115 -GTTPVQVCME---------LLSKK-------------VIQVACGSHHSMALT 144
>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
Length = 589
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 91 NEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCG-KKIVDLSYGSGPHILLC 149
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 150 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTSDG 206
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG+ C G GS +T QS +P + A + + + +S
Sbjct: 207 EVFSWGYNNC----------GQVGS---GTTANQS-VPRKVASSLQSKVVVSISAGQTSS 252
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + + I +V G HTL LSD G
Sbjct: 253 MALTDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPICIIQVVLGYAHTLALSDQGV 312
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 313 LYAWGANSHGQLGIGNK 329
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 115 TGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 173
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T + C+E LL ++ V ++ACG HS +T
Sbjct: 174 -GTTPVQVCME---------LLSKK-------------VIQVACGSHHSMALT 203
>gi|327288514|ref|XP_003228971.1| PREDICTED: RCC1 domain-containing protein 1-like [Anolis
carolinensis]
Length = 266
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 95/220 (43%), Gaps = 46/220 (20%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
+ P P+PA LC + + V G L E+G L +WGS GQ L G +
Sbjct: 35 RPPFFHPLPASLC---ARRLVLG--HEHMLLLDEAGTLFSWGSGR-HGQ--LGHGDLEDR 86
Query: 95 PEPFPLPTEASVVK---AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
PEP + V AA GW H +V+EAG++Y WGW E
Sbjct: 87 PEPQAVEALQGVALKEVAAGGW-HSATVSEAGDLYLWGWNES------------------ 127
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLS--PCLVT 207
Q LP++ A S A R T A R + + P G +F ++ P L+
Sbjct: 128 ----GQLGLPSKAASESQGAA-------RDTDGAGDRAQPQGP-PGADFISIQAFPALLH 175
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L G + K G RHT ++ G+++ WG+G GQLG G
Sbjct: 176 LPRGAEALKAGCGSRHTAAVTRTGELYTWGWGQYGQLGHG 215
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P V GV + +VAAGG H+ +S+ G ++ WG+ GQLGL S+
Sbjct: 89 PQAVEALQGVALKEVAAGGWHSATVSEAGDLYLWGWNESGQLGLPSK 135
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 25/91 (27%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
++ G H L+L + G ++ WG G GQLG G ++ P P + L+ A
Sbjct: 50 RLVLGHEHMLLLDEAGTLFSWGSGRHGQLGHGD-LEDRPEPQAVEALQGVA--------- 99
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+KE+A GG HSA V++
Sbjct: 100 ---------------LKEVAAGGWHSATVSE 115
>gi|345798049|ref|XP_003434392.1| PREDICTED: RCC1 domain-containing protein 1 [Canis lupus
familiaris]
Length = 282
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 39/197 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ EP P EA V +
Sbjct: 72 GAEHALLLDEAGQVFSWGQ-----------GRHGQLGHGSLEAEPEPRLLEALQGLPVAE 120
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A +R S +D T+ P
Sbjct: 121 VAAGGWHSVCVSETGDIYIWGWNESGQLALPSR------SLAED---------TKTIPRE 165
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+ + R+T+ + + P + F P L+ L G + K + G RHT +++
Sbjct: 166 ASGLNEDGFEVRRTAKGEDGAPAPFIAIQPF---PALLDLPLGADVVKASCGSRHTAVVT 222
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 223 GTGELYTWGWGKYGQLG 239
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 31/126 (24%)
Query: 187 EESENPASGDEFFTLSP-----CLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
E + P SG + +S LVT L P ++ ++ G H L+L + GQV+ WG G
Sbjct: 33 EPLQTPGSGADVRRVSASWSYTALVTPLAPELRARRLELGAEHALLLDEAGQVFSWGQGR 92
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
GQLG GS ++ P P L+ L+ V E+A GG H
Sbjct: 93 HGQLGHGS-LEAEPEPRLLEALQGLP------------------------VAEVAAGGWH 127
Query: 301 SAVVTD 306
S V++
Sbjct: 128 SVCVSE 133
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC- 261
P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L SR + IP
Sbjct: 107 PRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSR-SLAEDTKTIPRE 165
Query: 262 ----------LEHAASGKD---RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ A G+D P + Q + V + +CG RH+AVVT
Sbjct: 166 ASGLNEDGFEVRRTAKGEDGAPAPFIAIQPFPALLDLPLGADVVKASCGSRHTAVVT 222
>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
[Equus caballus]
Length = 966
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASV--VKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP P + + V V+ +AG A
Sbjct: 89 CGDYHSLALSKGGELFAWGQ-NTYGQ--LGVGRTFASTPTPQIVEHLSGVPLVQISAGEA 145
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-------APP 167
H ++++ + VY+WG +C G + KDS AL ++
Sbjct: 146 HSMALSMSRNVYSWGRNDC-------GQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSH 198
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI- 226
+ + +V + N + L+PCLVT G ++T++A G RHTL
Sbjct: 199 TALLTKDGLVFTFGAGKCGQLGHNSTQNE----LTPCLVTELVGKRVTQIACGRRHTLAY 254
Query: 227 LSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE 263
+SD+G+V+ +G G GQLG G + +++P P +P E
Sbjct: 255 VSDLGKVFSFGSGEGGQLGNGATHHQLIPLPMKLPSNE 292
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 29/206 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + Q S +P
Sbjct: 81 EKNIIQITCGDYHSLALSKGGELFAWG-QNTYGQLGVGRTFASTPTPQ--IVEHLSGVPL 137
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + R S R + G SP L+ ++ +A GG
Sbjct: 138 VQISAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGS 197
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG S L PCL GK
Sbjct: 198 HTALLTKDGLVFTFGAGKCGQLGHNS-----TQNELTPCLVTELVGKR------------ 240
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDM 307
V +IACG RH+ A V+D+
Sbjct: 241 --------VTQIACGRRHTLAYVSDL 258
>gi|160774403|gb|AAI55388.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 530
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 106/257 (41%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCG-KRIVDLSYGSGPHILVC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E VV+ A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNAIQGVAPVQVCMELLAKKVVQVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS +T QS +P + + + + +S
Sbjct: 148 EVFCWGYNNC----------GQVGS---GTTANQS-VPRRVSATLQSKVVVSIAAGQSSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + V I +V G HTL LSD G
Sbjct: 194 MAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGV 253
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 254 LYAWGANSHGQLGIGNK 270
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G +I ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 56 TGDNQSTIIPRRLDVLCGKRIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNGNAIQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
V + C+E LL ++ V ++ACG HS +T
Sbjct: 116 VAPVQV--CME---------LLAKK-------------VVQVACGSHHSMALT 144
>gi|410960604|ref|XP_003986879.1| PREDICTED: RCC1 domain-containing protein 1 [Felis catus]
Length = 320
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAGWAHC 116
G AL E+G++ +WG L G EP PL V + AAG H
Sbjct: 111 GAEHALLLDEAGQVFSWGQGR---HGQLGHGTLEAELEPRPLEALQGVPMAEVAAGGWHS 167
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V V+E G++Y WGW E A +R G K + G+ S L K G +V
Sbjct: 168 VCVSETGDIYIWGWNESGQLALPSRSLAEVG---KTAAGEASGL---------KEDGCDV 215
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+T+ P + F P L+ L PG K + G RHT +++ G+++ W
Sbjct: 216 ----RTAEGESGGLAPFIAIQPF---PALLDLPPGTDAVKASCGSRHTAVVTRTGELYTW 268
Query: 237 GYGGEGQLG 245
G+G GQLG
Sbjct: 269 GWGKYGQLG 277
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 25/104 (24%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L P ++ ++ G H L+L + GQV+ WG G GQLG G+ L
Sbjct: 94 PFYSPLAPELRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGT-------------L 140
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
E A + RPL QG + E+A GG HS V++
Sbjct: 141 E--AELEPRPLEALQGVP----------MAEVAAGGWHSVCVSE 172
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 22/122 (18%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P + GV + +VAAGG H++ +S+ G ++ WG+ GQL L SR +
Sbjct: 144 LEPRPLEALQGVPMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSR----SLAEVGK 199
Query: 261 CLEHAASG-KDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAV 303
ASG K+ VR S G A G VK +CG RH+AV
Sbjct: 200 TAAGEASGLKEDGCDVRTAEGESGGLAPFIAIQPFPALLDLPPGTDAVK-ASCGSRHTAV 258
Query: 304 VT 305
VT
Sbjct: 259 VT 260
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG D GQ L G+ TPE + +V
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLV 208
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
+ +AG AH ++++ +G VY+WG +C G ++ KDS AL +Q
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKDSPSCIEAL-DDQKVE 260
Query: 168 SDKRAGEEVVKRRKTSSAREESE-------NPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
G K+ + + ++ +E L PCLV G ++T++A G
Sbjct: 261 FLACGGSHTALLTKSGLVFTFGDGKYGQLGHNSTQNE---LRPCLVAGLVGNRVTQIACG 317
Query: 221 GRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP 260
+HTL +SDMG+V+ +G G EGQLG G +++P P +P
Sbjct: 318 RQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMKLP 359
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 29/206 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 207
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S R + G + SP + K+ +A GG
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEALDDQKVEFLACGGS 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG ++ + RP LV
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPCLV------- 303
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDM 307
+G G V +IACG +H+ A V+DM
Sbjct: 304 AGLVGNR-VTQIACGRQHTLAYVSDM 328
>gi|350994396|ref|NP_001017352.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
gi|89272755|emb|CAJ83624.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus (Silurana) tropicalis]
Length = 599
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG D+ G L
Sbjct: 101 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSTIIPRRLDVLCG-KRIVDLSYGSGPHILVC 159
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V++ A G H +++T G
Sbjct: 160 NEDGEVYSWGH---NGYSQLGNGNAIQGVAPVQVCMELLAKKVIQVACGSHHSMALTSDG 216
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ C G GS +T QS +P + + + + +S
Sbjct: 217 EVFCWGYNNC----------GQVGS---GTTANQS-VPRRVSATLQSKVVVSIAAGQSSS 262
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + V I +V G HTL LSD G
Sbjct: 263 MAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSDQGV 322
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 323 LYAWGANSHGQLGIGNK 339
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + + G +I ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 125 TGDNQSTIIPRRLDVLCGKRIVDLSYGSGPHILVCNEDGEVYSWGHNGYSQLGNGNAIQG 184
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
V + C+E LL ++ V ++ACG HS +T
Sbjct: 185 VAPVQV--CME---------LLAKK-------------VIQVACGSHHSMALT 213
>gi|6957714|gb|AAF32458.1| hypothetical protein [Arabidopsis thaliana]
Length = 314
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 104/270 (38%), Gaps = 42/270 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G + TWG + K P + +AA G HC++V +
Sbjct: 55 SLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 114
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G Y WG R +P ++ D + + + G L E+ R
Sbjct: 115 GRAYAWGKR--MPFHTLS-DLLGLENVRLIAVGAFHNLALEE-------------DGRLL 158
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
+ E +GD T P V + + +AAGG H+ L+D G+V+GWG G G
Sbjct: 159 AWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHG 218
Query: 243 QLGLGSRI---KMVPTPHLIPCLE---------HAASGKDRPLLVRQ------------G 278
+LGLG KMVP + E H G R + Q G
Sbjct: 219 RLGLGDNDKSSKMVPQKVNLLAEEDIIQFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEG 278
Query: 279 SVNSSG--KAGRSYVKEIACGGRHSAVVTD 306
S N + + G+ K IACGGRH+ + +
Sbjct: 279 SFNHTDEEEEGKWSAKSIACGGRHTLAIVE 308
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 80/216 (37%), Gaps = 50/216 (23%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E EP+ SV +G + +++ + G ++TWGW + G+
Sbjct: 38 EALEPY------SVRSVVSGSRNSLAICDDGTMFTWGWNQ-------------RGTLGHQ 78
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE--FFTLSPCLVTLNP 210
K +P+ ++ + + + + ++ A G F TLS L N
Sbjct: 79 PETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGKRMPFHTLSDLLGLEN- 137
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
+ +A G H L L + G++ WG GQLG G PT H +P G D
Sbjct: 138 ---VRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD---TQPTSHPVPV-----QGLD 186
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
LV +IA GG HS +TD
Sbjct: 187 DLTLV-----------------DIAAGGWHSTALTD 205
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG G + L +G P
Sbjct: 65 PRRLDSLSDKKIACLSYGSGPHIILATTE-GEVFTWGH---NGYTQLGNGTTNHGLVPCQ 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEVY WG + ++G ST
Sbjct: 121 VSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWG-------------YNNSGQVGSGSTAN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q A+P + + + S A ++ +SG++ +
Sbjct: 168 Q-AIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PT 223
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 224 PCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 29/135 (21%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC V+ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS +
Sbjct: 116 LVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVT 175
Query: 260 PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YV 291
CL+ + A G+ + +V G V N +G+ G V
Sbjct: 176 GCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRV 235
Query: 292 KEIACGGRHSAVVTD 306
+ +ACG H+ V+TD
Sbjct: 236 QRVACGFAHTLVLTD 250
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S IP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWG 258
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD TL P + KI ++ G G H ++ + G+V+ WG+ G QLG G+
Sbjct: 57 GDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N S K V E+ACG HS V+T
Sbjct: 112 -TNHGLVPC---------------QVSTNLSNKQ----VIEVACGSYHSLVLT 144
>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Xenopus laevis]
Length = 600
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG KD+ G L
Sbjct: 102 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCG-KKIKDLSYGSGPHILLC 160
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V+K A G H +++T G
Sbjct: 161 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 217
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG + ++G +T QS +P + + + + + +S
Sbjct: 218 EVFSWG-------------YNNSGQVGSGTTANQS-VPRKVSSSLQSKVVVSIAAGQTSS 263
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + V I +V G H+L LSD G
Sbjct: 264 MAITDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGV 323
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 324 LYAWGANSHGQLGIGNK 340
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD + P + + G KI ++ G G H L+ ++ G+V+ WG+ G QLG G+ I+
Sbjct: 126 TGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQ- 184
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T + C+E LL ++ V ++ACG HS +T
Sbjct: 185 -GTTPVQVCME---------LLSKK-------------VIKVACGSHHSMALT 214
>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
Length = 530
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + + V+++G GT +S I+ LCG KD+ G L
Sbjct: 32 NEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCG-KKIKDLSYGSGPHILLC 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G++ +WG G S L +G + P + E V+K A G H +++T G
Sbjct: 91 NEDGEVYSWGH---NGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTSDG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV++WG + ++G +T QS +P + + + + + +S
Sbjct: 148 EVFSWG-------------YNNSGQVGSGTTANQS-VPRKVSSSLQSKVVVSIAAGQTSS 193
Query: 184 SAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ++ + G+ L PC + V I +V G H+L LSD G
Sbjct: 194 MAITDNGHVYGWGYNGTGQLGLGNTGNQLMPCRLVFAQPVCIIQVVLGYAHSLALSDQGV 253
Query: 233 VWGWGYGGEGQLGLGSR 249
++ WG GQLG+G++
Sbjct: 254 LYAWGANSHGQLGIGNK 270
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 83/201 (41%), Gaps = 32/201 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETP--EPFPLPTEAS--VVKAAAGWAHCVS 118
L ++ G + +WG SY+ G G +P P L S VV+ A G H ++
Sbjct: 111 VLVLTQDGGVYSWGH-----NSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMA 165
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T GEVYTWG+ C G GS ST Q + A +KR +
Sbjct: 166 LTTEGEVYTWGYNNC----------GQIGS---GSTANQGSPRKVTACIGNKRIIDITCG 212
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + + E G+ +PC V GV I +V G H L L+
Sbjct: 213 QTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALT 272
Query: 229 DMGQVWGWGYGGEGQLGLGSR 249
D G V+GWG GQLG G++
Sbjct: 273 DNGVVFGWGANSYGQLGSGNK 293
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD +L P L+ G KI ++AG G H L+L+ G V+ WG+ QLG G
Sbjct: 81 GDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVYSWGHNSYMQLGNGG----- 135
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ G LL R N S K V +IACG HS +T
Sbjct: 136 -----------TSPGTSPSLLSR----NISNK-----VVQIACGSHHSMALT 167
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 102/266 (38%), Gaps = 56/266 (21%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G++ + GS +D+GQ L KH PE ++ + A G H +++T G+V+ WG
Sbjct: 142 GQVYSCGS-NDQGQ--LGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWG 198
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREE 188
D+ Q L P+E + R+ E
Sbjct: 199 ----------------------DNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDEL 236
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+ +F T P LV G KI ++ G +L+LS+ G V+ WG GQL L
Sbjct: 237 DAATLAYMDFMT-RPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCL-R 294
Query: 249 RIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAG---------- 287
+K VP P L IP + AA G+ L G V N G+ G
Sbjct: 295 ELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIP 354
Query: 288 -------RSYVKEIACGGRHSAVVTD 306
+ IACG HS V+T+
Sbjct: 355 SRLKTLEHQFCAHIACGEDHSVVLTE 380
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-- 260
P LV G+ I ++AAGGRHTL L+ GQV+ WG GQLG+G PH IP
Sbjct: 302 PTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGD-----TAPHTIPSR 356
Query: 261 --CLEHA-----ASGKDRP-LLVRQGSVNSSGKAGR 288
LEH A G+D +L G V S G G+
Sbjct: 357 LKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQ 392
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP----EPFPLPTEASVVKAA 110
VCG F+L SE G + WG + GQ L K P E + +P + + A
Sbjct: 265 VCGAN--FSLVLSERGDVFAWGD-NTSGQLCLRELKTVPVPTLVKELYGIP----IRQLA 317
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT-EQAPPSD 169
AG H +++T G+VY+WG FG G S L T E +
Sbjct: 318 AGGRHTLALTFNGQVYSWG----------NNQFGQLGVGDTAPHTIPSRLKTLEHQFCAH 367
Query: 170 KRAGEE-VVKRRKT----SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
GE+ V +T S G ++P ++ G ++V G RHT
Sbjct: 368 IACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHT 427
Query: 225 LI-LSDMGQVWGWGYGGEGQLGLGSRI---KMVPTPHLIPCLE 263
++ +++ +G GG GQLG G + + V TP L+ L+
Sbjct: 428 IVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLD 470
>gi|294881725|ref|XP_002769466.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
gi|239872925|gb|EER02184.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
Length = 576
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 119/281 (42%), Gaps = 32/281 (11%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
++ V+ WG +P T + S L + L G G ALA +E GK+++WG
Sbjct: 169 DSRVFAWGRMPWTGAQTSQGLEDV---LSLARKRIRSVAIGAGHALALTEGGKVMSWG-L 224
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+D GQ + PE LP++ + K A G + V+VT+AG+++TWG + +
Sbjct: 225 NDSGQLGTGDERSRIIPETVKLPSDVYIDKIACGPDYSVAVTKAGQLWTWGRYQASNWPR 284
Query: 139 VTRD--------------FGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+ D G AGS K S G Q L + E V +
Sbjct: 285 LFVDTWCNGNKPGCDNTAVGLAGSRILKVSCGDQHMLALTK---------EGEVFSWGYN 335
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ D P V P KI+ +AAGG H++ + D G V+ WG +GQ
Sbjct: 336 DFGQLGWGLHGVDVVGQQRPHKVPHLP--KISDIAAGGGHSVAVGDDGAVYSWGSNSQGQ 393
Query: 244 LGLGSRIKMV-PTPHLIPC-LEHAASGKDRPLLVRQGSVNS 282
+G G R PT +P ++ +GK LLV + NS
Sbjct: 394 IGHGLRQDFAEPTRVQMPQPVKSVTAGKVTTLLVCDDADNS 434
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMV--PTPHLIPCL----E 263
G +I KV+ G +H L L+ G+V+ WGY GQLG G + +V PH +P L +
Sbjct: 307 GSRILKVSCGDQHMLALTKEGEVFSWGYNDFGQLGWGLHGVDVVGQQRPHKVPHLPKISD 366
Query: 264 HAASGKDRPLLVRQGSV-----NSSGKAGRSYVKEIA 295
AA G + G+V NS G+ G ++ A
Sbjct: 367 IAAGGGHSVAVGDDGAVYSWGSNSQGQIGHGLRQDFA 403
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG D GQ L G+ TPE + +V+ +AG A
Sbjct: 129 CGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLVQISAGEA 185
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G VY+WG +C G ++ KDS G
Sbjct: 186 HSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCH 238
Query: 158 SALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
+AL T+ D + G+ ++N L P LVT G ++
Sbjct: 239 TALLTKSGLVFTFGDGKYGQ---------LGHNSTQN--------ELRPRLVTGLVGNRV 281
Query: 215 TKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
T++A G +HTL +SD G+V+ +G G EGQLG G+R +++P P
Sbjct: 282 TQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 325
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I ++ G H+L LS G+++ WG +GQLG+G TP + +P ++ +A
Sbjct: 124 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 183
Query: 268 GKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVVT 305
L G+V S G+ G +Y K+ +ACGG H+A++T
Sbjct: 184 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLT 243
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 121 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 177
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP-CLVTLNPGVKITKVAAGG 221
Q + + + S R + G + SP C+ TL+ K+ +A GG
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQ-KVEFLACGG 236
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
HT +L+ G V+ +G G GQLG ++ + RP LV
Sbjct: 237 CHTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------ 273
Query: 282 SSGKAGRSYVKEIACGGRHS-AVVTD 306
+G G + V +IACG +H+ A V+D
Sbjct: 274 -TGLVG-NRVTQIACGRQHTLAYVSD 297
>gi|330792530|ref|XP_003284341.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
gi|325085687|gb|EGC39089.1| hypothetical protein DICPUDRAFT_148108 [Dictyostelium purpureum]
Length = 448
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 48/262 (18%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVV--K 108
D+ GGG + + G L T+GS D G L + K+ TP+P S+
Sbjct: 43 NDIVGGG-SHTMMVANDGDLYTFGSNDCGQLGFKLLENQKYITTPQPVDYFKNNSIKIKN 101
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+ GW+H ++ G VY+WG +++ F + + +K+ +Q + + +
Sbjct: 102 CSGGWSHSLACDVNGFVYSWGSNS---HSQLGLTFNAIDTTEKEKKPQQLPIKIDSNNNN 158
Query: 169 DKRAGEEVVKR------RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ + EV ++ + +E NP + + F +N +KI V+ G R
Sbjct: 159 NNNSNTEVKRKIVFKKKIINNINKENQFNPININYF---------INEKIKIISVSCGMR 209
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+++LS +V+GWG GQL + + P L LE G
Sbjct: 210 HSIVLSSDFKVYGWGCNKFGQLSNNVQGVLQELPKL---LEFGGEG-------------- 252
Query: 283 SGKAGRSYVKEIACGGRHSAVV 304
V +I+CG +H+ ++
Sbjct: 253 --------VSQISCGFKHTVLL 266
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 99/246 (40%), Gaps = 29/246 (11%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLT 87
G + L PI G + V CG ++A E+G + WG A EGQ L
Sbjct: 9 GAGRDNKEALEPILLERFRGKRIRSVA---CGEQHSMAVGETGDVYVWGRAK-EGQ--LG 62
Query: 88 SGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
+G+ P+ E VV G+ HC++VT G++Y WG
Sbjct: 63 NGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHK---------- 112
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL-- 201
GS K+ G L + + G + EE E + F +
Sbjct: 113 HVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTP 172
Query: 202 ----SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
SP +VT VK+ +VAAG +L ++ G+V+ WG+ + QLGLG R P
Sbjct: 173 YTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQ-SVPQ 231
Query: 258 LIPCLE 263
L+P L+
Sbjct: 232 LVPHLQ 237
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 77/211 (36%), Gaps = 49/211 (23%)
Query: 36 SPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
+P P P + G K V G F+LA + G++ +WG +++ Q L +
Sbjct: 171 TPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGF-NEKCQLGLGHRYNQSV 229
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P+ P +V A G H V ++ AG VYT+G G F +
Sbjct: 230 PQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGL----------------GVFGQLGH 273
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G S +E RR + E ++G+ +I
Sbjct: 274 GVSS---------------DERFPRRVEALVPAEEGVESAGE----------------RI 302
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
++A G HTL L G VW WG GQ G
Sbjct: 303 VQIACGSHHTLALGVSGTVWTWGSAEYGQQG 333
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMV 253
G + P LV GV I G +H+++LS G V+ +G G GQLG G S +
Sbjct: 222 GHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERF 281
Query: 254 P--TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
P L+P E S +R + +IACG H+
Sbjct: 282 PRRVEALVPAEEGVESAGER-------------------IVQIACGSHHT 312
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 101/280 (36%), Gaps = 91/280 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHC 116
G G + SE G + TWG DD L G +G P +V+A G H
Sbjct: 48 GSGHTVVLSEDGAVYTWGRGDD---GRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHT 104
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+VT+ GE+YTWG G + K G +S PT
Sbjct: 105 AAVTDKGELYTWG----------------GGMYGKLGHGNESGHPT-------------- 134
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLV--TLNPGVKITKVAAGGRHTLILSDMGQVW 234
PC+V + G ++T++A G RHT++L+D+G+V+
Sbjct: 135 --------------------------PCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVY 168
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPLLVRQGSVNS--SGKA 286
WG G +G + P ++ L+ AA G L G + + GK
Sbjct: 169 TWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKF 228
Query: 287 GR--------------------SYVKEIACGGRHSAVVTD 306
GR V +ACGG HSA + D
Sbjct: 229 GRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILD 268
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 64/153 (41%), Gaps = 33/153 (21%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R E GD P LV + +VA G HT++LS+ G V+ WG G +G+LG
Sbjct: 14 RGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLG 73
Query: 246 LGSR-IKMVPTPHLIPCLE------------HAASGKDRPLLV--------RQGSVNSSG 284
G K V P ++ LE H A+ D+ L + G N SG
Sbjct: 74 HGDNGWKYV--PRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESG 131
Query: 285 KAGRSYVK----------EIACGGRHSAVVTDM 307
VK +IACG RH+ V+TD+
Sbjct: 132 HPTPCMVKHLRDEGARVTQIACGSRHTVVLTDL 164
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
LCG G G +AT+E G++ TWG S L +G + P + T
Sbjct: 71 LCGKKITCLSYGSGPHVVVATAE-GEVYTWGH---NAYSQLGNGTTNNSLLPCQISTNLV 126
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V + A G H + +T GEVYTWG + ++G ST Q A+P
Sbjct: 127 NKKVTEVACGSHHSMILTSDGEVYTWG-------------YNNSGQVGSGSTANQ-AIPR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPG 211
+ + + S A E+ +G+ L +PC + G
Sbjct: 173 RVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+++ +VA G HTL+L+D GQ++ WG GQLG G+R
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNR 270
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 29/136 (21%)
Query: 200 TLSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+L PC ++ N K+T+VA G H++IL+ G+V+ WGY GQ+G GS +
Sbjct: 115 SLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRV 174
Query: 259 IPCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIR 234
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 235 VQRVACGYAHTLVLTD 250
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 99/240 (41%), Gaps = 27/240 (11%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPE 96
+SP+ + G S + VC GG A+ T + G++ TWG G L G E+P
Sbjct: 260 VSPVVVQGLLGLSVQQVCCGGQHAAVLT-DCGEIFTWGRG---GFGRLGHGNREGLESPR 315
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
V+ A G+A+ +VT +GE+YTWG A G + + +
Sbjct: 316 RIEALEGIPCVQVACGFAYTAAVTASGELYTWG-------AGENGRLGLGDVADRHTPSR 368
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG----- 211
L ++ V+ R T A + E GD L P L+ G
Sbjct: 369 VEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGAL 428
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---------VPTPHLIPCL 262
V+ V GG HT+ L+ GQV+ WG+ QLG+G+ + +P+P L+ L
Sbjct: 429 VRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESL 488
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 99/260 (38%), Gaps = 32/260 (12%)
Query: 60 CGFAL--ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CGFA A + SG+L TWG+ ++ G+ L TP + V + AG H
Sbjct: 330 CGFAYTAAVTASGELYTWGAGEN-GRLGLGDVADRHTPSRVE-GLHSKVKEVYAGSVHSC 387
Query: 118 SVTEAGEVYTWGWRECV----------PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
+T G VY +G E P T GS ++ S G
Sbjct: 388 VLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQ 447
Query: 168 SDKRA-GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
A G V + ++ N +F SP LV G+ I KV AG H+
Sbjct: 448 GQVYAWGHNRVAQLGIGNSFTVPRNMEGA--YFLPSPQLVESLVGMNIVKVVAGWGHSAA 505
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+ GQ++ G +GQLGLGS P P E + P Q +
Sbjct: 506 LTVDGQLYVCGRNYQGQLGLGS-------PQGFPQNE-----RGHPF---QADFCLIDRL 550
Query: 287 GRSYVKEIACGGRHSAVVTD 306
+K+IACGG HS V +
Sbjct: 551 QHLKIKQIACGGEHSVAVAE 570
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 26/137 (18%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI---- 250
G+ + +SP +V G+ + +V GG+H +L+D G+++ WG GG G+LG G+R
Sbjct: 254 GEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLES 313
Query: 251 -KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS--SGKAGR------------------- 288
+ + IPC++ A + G + + +G+ GR
Sbjct: 314 PRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLH 373
Query: 289 SYVKEIACGGRHSAVVT 305
S VKE+ G HS V+T
Sbjct: 374 SKVKEVYAGSVHSCVLT 390
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 54/181 (29%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
++VK AGW H ++T G++Y G R++ Q L + Q
Sbjct: 492 NIVKVVAGWGHSAALTVDGQLYVCG-----------RNYQG-----------QLGLGSPQ 529
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
P ++R +P F CL+ +KI ++A GG H+
Sbjct: 530 GFPQNERG------------------HP------FQADFCLIDRLQHLKIKQIACGGEHS 565
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-------HAASGKDRPLLVRQ 277
+ +++ G+VW +G G +GQLG S + P L+ L+ H A G + L++
Sbjct: 566 VAVAENGEVWSFGAGQKGQLGHESTTRE-DFPRLVQALKSTRREIMHVACGNNCTLVLAG 624
Query: 278 G 278
G
Sbjct: 625 G 625
>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
Length = 815
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 43/282 (15%)
Query: 40 SPIPAR-LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
+PI + L + D+ G F+ A ++SGK+ TWG +++GQ L +P+
Sbjct: 194 TPIQVQGLLANEEVIDI-SAGWAFSAAVTKSGKIFTWG-FNEKGQLGLKHRWFNSSPQLV 251
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST---G 155
+ +V + G H +VTE G++YTWG FG G S
Sbjct: 252 KTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGV----------FGQLGHSNVKSYLHPK 301
Query: 156 KQSALPTEQAPPSDKRAGEE---VVKRRKTSS-----------AREESENPASG---DEF 198
K +A S G V+ R + A EE+++ G + F
Sbjct: 302 KVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHF 361
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVP--- 254
SP +V KI V G HTL L++ +V+ WG+G G LGL S R ++VP
Sbjct: 362 KYSSPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLV 421
Query: 255 ---TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ I C+ ++G+ L+VR + S + V E
Sbjct: 422 TSISGEEISCI---SAGEKHSLIVRGSDLTSFAFDYKGLVNE 460
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P ++ G I ++G H + +S G V+ WG G EGQLG+ ++ P+LI
Sbjct: 23 LEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNLIK 82
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L H V ++ACG HS +TD
Sbjct: 83 TLLHER------------------------VVKVACGNFHSLALTD 104
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 27/225 (12%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQ-----SYLTSGKHGETPEPFPLPTEASVVKAA 110
C G + S G + +WG EGQ L S K P VVK A
Sbjct: 39 CSSGEAHNICVSRFGDVYSWGRGK-EGQLGVPEKMLFSTK----PNLIKTLLHERVVKVA 93
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++T+ G VY WG + +K + + G + K + S
Sbjct: 94 CGNFHSLALTDQGRVYEWGQLHKIDDSKTGLE-ATNGLLEMPGMSKPKYQSIIENSVSQY 152
Query: 171 RAGEEVVKRRKTSSAREESENPASGDE------------FFTLSPCLVT-LNPGVKITKV 217
GE+ + ++S + ++ AS E + +P V L ++ +
Sbjct: 153 LNGEKEI--YDSTSGNNDDDDEASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDI 210
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+AG + ++ G+++ WG+ +GQLGL R +P L+ L
Sbjct: 211 SAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRW-FNSSPQLVKTL 254
>gi|355693002|gb|EHH27605.1| RCC1 domain-containing protein 1 [Macaca mulatta]
Length = 376
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDEAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G V A G VK ++CG RH+AVV
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVK-VSCGSRHTAVV 315
Query: 305 T 305
T
Sbjct: 316 T 316
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGHVELS--GSASGAAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTL 201
S G G AL AP S R GE + A EE ++P + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHNVVPEAVEE-DDPGGEAQIGRLPL 136
Query: 202 SPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P ++ ++ G H L+L + GQV+ WG G GQLG G+ +
Sbjct: 137 LPCARAPVSPRPPFYRPLAPELRARQLELGAEHALLLDEAGQVFSWGGGRHGQLGHGT-L 195
Query: 251 KMVPTPHLIPCLE 263
+ P L+ L+
Sbjct: 196 EAELEPRLLEALQ 208
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 52/234 (22%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ + +V
Sbjct: 47 KSIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGIGRLFASIPTPQLVEHLSGVPLV 103
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR-------------------ECVPSAKVTRDFGSAGS 148
+ +AG AH ++++ +G +Y+WG E + S KV +F + G
Sbjct: 104 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKV--EFLACG- 160
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G +AL TE AG K + ++E L P LVT
Sbjct: 161 ------GSHTALLTEDGQVFTFGAG----KHGQLGHNSTQNE----------LRPRLVTE 200
Query: 209 NPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIP 260
G+++T+VA G RHTL +SD+G+V+ +G G EGQLG G+ +++P P +P
Sbjct: 201 LTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLP 254
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 28/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I ++ G H+L LS G+++ WG GQLG+G +PTP L +P ++ +A
Sbjct: 49 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108
Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
L G++ N G+ G + V+ +ACGG H+A++T
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLT 168
Query: 306 D 306
+
Sbjct: 169 E 169
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 84/211 (39%), Gaps = 31/211 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
LA +ESG+L++WG + Q G P V + A G H +++T
Sbjct: 163 VLAVTESGELLSWGH-NGYCQLGNNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALTTN 221
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---KRAGEEVVKR 179
G+VY WG C G GS G + PT + S +R +
Sbjct: 222 GDVYAWGQNNC----------GQVGS------GSTTNQPTPRKVSSGIGGRRCIGVACGQ 265
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + E E G+ SPC VT GV I KV G HT+ LSD
Sbjct: 266 TSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSD 325
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
G ++ WG GQLG G++ V +P +P
Sbjct: 326 EGVLYTWGANSYGQLGTGNKANQV-SPFKMP 355
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G S P P ++ G + G CG ++A E+G++ WG
Sbjct: 224 VYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGY- 282
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G + P + VV K G+AH +++++ G +YTWG
Sbjct: 283 --NGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWG 333
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+++G+L T+G +D GQ L +H TP+ V A G H + T AGE
Sbjct: 483 VITDAGELYTFG-MNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGE 541
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG------EEVVK 178
++T G D+G G + +Q LPT A P++ + VV
Sbjct: 542 LFTCG----------KNDYGQLGL----AHNRQIKLPTLVALPNEMVSFVACGYYHSVVV 587
Query: 179 R---RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
R S R + G + P +V L+ ++ + G HT++LS+ GQV+
Sbjct: 588 STGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYV 647
Query: 236 WGYGGEGQLG-LGSRIKMVPTPHLI-------PCLEHAASGKDRPLLVRQGSVNSSG 284
+G +GQLG GS ++P P + C++ AA L+V + N G
Sbjct: 648 FGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDDG 704
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 24/111 (21%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
+ L P + VK + G H + L+D G + WGY GQLG + +
Sbjct: 400 ERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHV 459
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LI L KD+ L G A SY HSAV+TD
Sbjct: 460 PKLIESL------KDKKL----------GFASVSY--------HHSAVITD 486
>gi|294874340|ref|XP_002766907.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
gi|239868282|gb|EEQ99624.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
Length = 577
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 19 ETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
++ V+ WG +P T + S L + L G G ALA +E GK+++WG
Sbjct: 169 DSRVFAWGRMPWTGAQASQGLEDV---LSLARKRIRSVAIGAGHALALTEGGKVMSWG-L 224
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+D GQ + PE LP++ + K A G + V+VT+AG+++TWG + +
Sbjct: 225 NDSGQLGTGDERSRIIPETVKLPSDVYIDKIACGPDYSVAVTKAGQLWTWGRYQASNWPR 284
Query: 139 VTRD--------------FGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+ D G AGS K S G Q L + E V +
Sbjct: 285 LFVDTWCNGNKPGCDNTAVGLAGSRILKVSCGDQHMLALTK---------EGEVFSWGYN 335
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ D P V P KI+ +AAGG H++ + D G V+ WG +GQ
Sbjct: 336 DFGQLGWGLHGVDVVGQQRPHKVPHLP--KISDIAAGGGHSVAVGDDGAVYSWGSNSQGQ 393
Query: 244 LGLG--------SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
+G G +R++M P P ++ +GK LLV + NS
Sbjct: 394 IGHGLRQDFAEATRVQM-PQP-----VKAVTAGKVTTLLVCDDADNS 434
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMV--PTPHLIPCL----E 263
G +I KV+ G +H L L+ G+V+ WGY GQLG G + +V PH +P L +
Sbjct: 307 GSRILKVSCGDQHMLALTKEGEVFSWGYNDFGQLGWGLHGVDVVGQQRPHKVPHLPKISD 366
Query: 264 HAASGKDRPLLVRQGSV-----NSSGKAGRSYVKEIA 295
AA G + G+V NS G+ G ++ A
Sbjct: 367 IAAGGGHSVAVGDDGAVYSWGSNSQGQIGHGLRQDFA 403
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ + +V
Sbjct: 106 KSIIQIACGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFASIPTPQAVEHLSGVPLV 162
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR------------ECVPSAKVTRD-----FGSAGSFQ 150
+ +AG AH ++++ +G VY+WG E PS T D F + G
Sbjct: 163 QISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACG--- 219
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
G +AL T AG+ + +S + E L P LVT
Sbjct: 220 ----GSHTALLTTDGLVFTFGAGK--YGQLGHNSTQNE------------LRPRLVTELA 261
Query: 211 GVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPC---LEHA 265
G ++T++A G RHTL +SD+G+V+ +G G EGQLG G+ +++P P +P L+
Sbjct: 262 GNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFE 321
Query: 266 ASGKDRPLLVRQGSVNS 282
+ D+ L++ G S
Sbjct: 322 SRTSDKELVMIAGGNQS 338
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP----HL--IPCLEHAAS 267
I ++A G H+L LS G+++ WG GQLG+G +PTP HL +P ++ +A
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 167
Query: 268 GKDRPLLVRQGSVNSSGKA-----------GRSY-----------VKEIACGGRHSAVVT 305
L G+V S G+ G + V+ +ACGG H+A++T
Sbjct: 168 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 227
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 100/260 (38%), Gaps = 53/260 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F + SE GK+ T+G Y++ TP+ + +VK +AG++ C +
Sbjct: 215 GIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQL--IKDLNDIVKISAGYSFCAA 272
Query: 119 VTEAGEVYTWG------------WRECVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQA 165
+T+ G++YTWG + PS + FGS S S G A T+Q
Sbjct: 273 ITKQGKLYTWGNNRNGQLGNSQSLYQTKPS--IVTGFGSQNSIVDVSCGDNFIAALTQQG 330
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
G + G++ +P V KI K+A GG H
Sbjct: 331 QLYTWGFGGD--------------GQLGHGNKSDLYAPRHVEFKQ--KIIKIACGGSHAA 374
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ Q++ +G G EGQLG+G + + P L GK
Sbjct: 375 FITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQ--------------- 419
Query: 286 AGRSYVKEIACGGRHSAVVT 305
V ++ CGG H+ +T
Sbjct: 420 -----VVDVTCGGEHTIAIT 434
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 99/260 (38%), Gaps = 56/260 (21%)
Query: 15 EECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
E ET+VY WGY G E + +P + K V G ++A + +G
Sbjct: 44 NEYPETIVYSWGYGGFGQLGLQNENN-YYTPTEIEVLTDKKIKKVEAGKS-ISMALTHNG 101
Query: 71 KLITWGSA-------DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
++ +WG +D +T PE + + + G H +VTE G
Sbjct: 102 EVYSWGKNKGGILGHEDRLSFNMTQ------PERIEKLLGKKIKQISCGQFHMAAVTEDG 155
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EVYTWG ++FG G + L EQ +KR S
Sbjct: 156 EVYTWG----------NKEFGKLGH--------EEELKQEQKIK---------IKRGNLS 188
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ ++ P + +K +VA G + T++LS+ G+V+ +GY G
Sbjct: 189 HDYLQD----------SMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGS 238
Query: 244 LGLGSRIKMVPTPHLIPCLE 263
LG S V TP LI L
Sbjct: 239 LGYVSDQNSVTTPQLIKDLN 258
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 78/205 (38%), Gaps = 43/205 (20%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
+ A G V ++E G+VYT+G+ + +GS G ++ L +
Sbjct: 211 QVACGIQFTVVLSEDGKVYTFGYNQ----------YGSLGYVSDQNSVTTPQLIKDLNDI 260
Query: 168 SDKRAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVT-LNPGVKITKVAAGG 221
AG + K+ K + + + + P +VT I V+ G
Sbjct: 261 VKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGD 320
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
L+ GQ++ WG+GG+GQLG G++ + H+
Sbjct: 321 NFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHV----------------------- 357
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTD 306
+ + +IACGG H+A +T+
Sbjct: 358 ----EFKQKIIKIACGGSHAAFITE 378
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 18 KETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
K+ +Y WG G + P+ + G S + CG F A ++ G+L T
Sbjct: 275 KQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYT 334
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WG D GQ L G + P + + ++K A G +H +TE ++Y +G
Sbjct: 335 WGFGGD-GQ--LGHGNKSDLYAPRHVEFKQKIIKIACGGSHAAFITEDNQLYQFG 386
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P+ + T S V++ A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A + +SG++ +PC V G+++ +VA
Sbjct: 184 VNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 241 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 30/123 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLE-----HAA 266
++ +VA G H+L+L+ G+V+ WGY GQ+G GS P P + CL+ + A
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRVTGCLQNKVVVNIA 187
Query: 267 SGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVKEIACGGRHSAV 303
G+ + +V G V N +G+ G V+ +ACG H+ V
Sbjct: 188 CGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLV 247
Query: 304 VTD 306
+TD
Sbjct: 248 LTD 250
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 102/253 (40%), Gaps = 87/253 (34%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G + A +E G+L WG + EGQ L S + P + S + + G+ H
Sbjct: 144 GANISAALTEDGELFMWGD-NSEGQIGLNSISNVYVPRQVTVGKPISWI--SCGYYHSAF 200
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
VT G++YT+G EC G G LP+EQ ++
Sbjct: 201 VTMEGKLYTFGEPEC----------GKLG------------LPSEQ-----------LIN 227
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--KITKVAAGGRHTLILSDMGQVWGW 236
RK P LV+ G+ K+ +VA GG HT++L++ V+ +
Sbjct: 228 HRK---------------------PQLVS---GISEKVIQVACGGGHTVVLTEKA-VYTF 262
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G GQLGLGS I P P + LEH K ++ I+C
Sbjct: 263 GQGRFGQLGLGSFIFQAPEPAI---LEHVKDQK---------------------IRHISC 298
Query: 297 GGRHSAVVTDMSY 309
G H+A++TD+ +
Sbjct: 299 GENHTALITDVGH 311
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 49/131 (37%), Gaps = 30/131 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVP 254
P V K+ A G HTL+ ++ G V+ G EGQLGLG I
Sbjct: 74 PICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFT 133
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------I 294
+ H I L +A L G + NS G+ G + + I
Sbjct: 134 SRHKIKQL--SAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWI 191
Query: 295 ACGGRHSAVVT 305
+CG HSA VT
Sbjct: 192 SCGYYHSAFVT 202
>gi|440906559|gb|ELR56810.1| RCC1 domain-containing protein 1, partial [Bos grunniens mutus]
Length = 165
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 20/137 (14%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V ++E G++Y WGW E A T+ G +++G +
Sbjct: 6 AAGGW-HSVCLSETGDIYIWGWNESGQLALPTKSLAEDGKTTAEASGLE----------- 53
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G EV ++ S+ + + P + F P L+ L+PG + KV+ G RHT +L+
Sbjct: 54 --EDGSEV---KRGSAGEDGAPAPFIAVQPF---PALLDLSPGSEAVKVSCGSRHTAVLT 105
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 106 RTGELYTWGWGKYGQLG 122
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 32/115 (27%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
++ +VAAGG H++ LS+ G ++ WG+ GQL L PT L E + +
Sbjct: 1 RMAEVAAGGWHSVCLSETGDIYIWGWNESGQLAL-------PTKSLA---EDGKTTAEAS 50
Query: 273 LLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSAVVT 305
L GS G AG S +++CG RH+AV+T
Sbjct: 51 GLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLT 105
>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
Length = 794
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 117/295 (39%), Gaps = 74/295 (25%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG-- 76
V+ WG L EK+ R+ G K + CG ++A G++ +WG
Sbjct: 281 VFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGG 340
Query: 77 -SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV-TEAGEVYTWG---WR 131
++ ++GQ + + E P +V+ +AG H +++ E E+Y WG +
Sbjct: 341 GASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDNELYAWGSGTYG 400
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
EC G FQ S K +VK K + +E
Sbjct: 401 EC-----------GLGEFQASSKPK-------------------IVKMPKDFVSNQEMNQ 430
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+ F + P IT+++AGG HTL+L+ G+V+ +GYG GQLGL S K
Sbjct: 431 MQNEFAFSSQKPL---------ITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRS-TK 480
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P L+ + LL + +K IA G HS +++D
Sbjct: 481 NFCSPQLV-----------KDLLSKN-------------IKAIAAGWNHSLILSD 511
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLSGIPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----------------- 154
H ++++ +G +Y+WG E FG G + KDS
Sbjct: 202 HSMALSMSGNIYSWGKNE----------FGQLGLDHTESKDSPSLIEALDNQKVEFLACG 251
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G +AL T+ AG K + ++E L PCLV G ++
Sbjct: 252 GSHTALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELAGNRV 297
Query: 215 TKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
T++A G HTL +SD+G+V+ +G G EGQLG G+R +++P P
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLP 341
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 28/121 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
KI ++ G H+L LS G+++ WG GQLG+G + TP + IP + +A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISA 198
Query: 267 SGKDRPLLVRQGSVNSSGK----------------------AGRSYVKEIACGGRHSAVV 304
L G++ S GK V+ +ACGG H+A++
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258
Query: 305 T 305
T
Sbjct: 259 T 259
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P+ + T S V++ A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQSKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A + +SG++ +PC V G+++ +VA
Sbjct: 184 VNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 241 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 30/123 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLE-----HAA 266
++ +VA G H+L+L+ G+V+ WGY GQ+G GS P P + CL+ + A
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRVTGCLQSKVVVNIA 187
Query: 267 SGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVKEIACGGRHSAV 303
G+ + +V G V N +G+ G V+ +ACG H+ V
Sbjct: 188 CGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLV 247
Query: 304 VTD 306
+TD
Sbjct: 248 LTD 250
>gi|351715554|gb|EHB18473.1| RCC1 domain-containing protein 1 [Heterocephalus glaber]
Length = 370
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 82/199 (41%), Gaps = 47/199 (23%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ EP P P EA + +
Sbjct: 164 GIEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAEPEPRPLEALQGLPMSQ 212
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A TR ++ TG+ L
Sbjct: 213 LAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSLAEG---KRTDTGEDEGL-------- 261
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRHTLI 226
S +E PA F + P L+ L G + V+ G RHT +
Sbjct: 262 ----------NEDGSKVERAAEAPAP---FIAIQPFPALLDLPLGSEAVGVSCGSRHTAV 308
Query: 227 LSDMGQVWGWGYGGEGQLG 245
++ G+++ WG+G GQLG
Sbjct: 309 VTRTGELYTWGWGKYGQLG 327
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 94/235 (40%), Gaps = 48/235 (20%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FGSA 146
SG+ + P PL + +A W++ VT G V G +A RD + S
Sbjct: 23 SGREHQVLSPEPLRAGGDICHVSASWSYTALVTRGGRVELSG--SASGAADGCRDAWASE 80
Query: 147 G--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS---------- 194
G +D +G ++ L + PP GE + + + EE + P +
Sbjct: 81 GLLVLLRDRSGSRAEL--QAWPPGSGLRGEPLWAQDPEA---EEGDEPGAEGRTGLLPLL 135
Query: 195 --GDEFFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+ +L P L L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++
Sbjct: 136 PGSRAYVSLQPPLRRALAPELRARRLELGIEHALLLDAAGQVFSWGGGRHGQLGHGT-LE 194
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P P RPL QG S ++A GG HS V++
Sbjct: 195 AEPEP--------------RPLEALQGLPMS----------QLAAGGWHSVCVSE 225
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 25/112 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ ++++AAGG H++ +S+ G ++ WG+ GQL L PT L + +G+D
Sbjct: 207 GLPMSQLAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRSLAEG-KRTDTGED 258
Query: 271 RPLLVRQGSVNSSGKAGRSYVK-----------------EIACGGRHSAVVT 305
L V + +A ++ ++CG RH+AVVT
Sbjct: 259 EGLNEDGSKVERAAEAPAPFIAIQPFPALLDLPLGSEAVGVSCGSRHTAVVT 310
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 104/252 (41%), Gaps = 32/252 (12%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + VY G+ G S + I +LC D + G G LA
Sbjct: 32 NEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMG-PHVLAV 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPE----PFPLPTEASVVKAAAGWAHCVSVTEA 122
++SG+L +WG G+ G T E P + + V++ A G H +++TE
Sbjct: 91 TDSGELYSWGHGG--------YGQLGHTSEEKSKPVLVYMQKKVIQVACGSYHSIALTED 142
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEVY WG C G S + + + S +P+++ G+ T
Sbjct: 143 GEVYAWGSNNC-------GQLGLGISNNQATPKRVSLIPSKKIVSV--SCGQSFTVMLTT 193
Query: 183 SSAREE---SENPASGDEFFT--LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGW 236
+ N G E T L P VT + G I K+ G H L+L+D+G+++ W
Sbjct: 194 DGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSW 253
Query: 237 GYGGEGQLGLGS 248
G GQLGLG+
Sbjct: 254 GANSYGQLGLGT 265
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
PILS IP+ L V GG AL T +G + G G L G T E
Sbjct: 8 PILSFIPSSLATKVKKAFVFGGAGNEALLTLTNGDVYALGF---NGNGCLGVGDGSSTLE 64
Query: 97 PFPLPT--EASVVKAAAGWA-HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
P + + +V+ A G H ++VT++GE+Y+W G G Q
Sbjct: 65 PKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSW---------------GHGGYGQLGH 109
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------TLSP 203
T ++ + P K+ + + + E+ E A G +P
Sbjct: 110 TSEEKSKPV--LVYMQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATP 167
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V+L P KI V+ G T++L+ G+++ WGY G GQLG+ + T L P
Sbjct: 168 KRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENN-----TNQLQP--- 219
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
V +G ++++I CG H V+TD+
Sbjct: 220 ----------------VRVTGSLFGKFIEKIVCGMAHVLVLTDI 247
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 87/334 (26%), Positives = 132/334 (39%), Gaps = 88/334 (26%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L G+ G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHGREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV-----NSSG 284
GQLGL +K++ T + I C EH A +L + G V S G
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGAGSCG 272
Query: 285 KAGR-----------------SYVKEIACGGRHS 301
+ G S V +IACG +H+
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
G HT +++ G ++GWG+G G LGLG R ++VP
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP 215
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 75/270 (27%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG ++ G+ TE + K
Sbjct: 129 DSHCLAVTMEGEVQSWG---------------------RNQNGQLGLGDTEDSLVPQKIQ 167
Query: 173 GEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTLNPGVKIT 215
E ++ + ++ E + N GD L P VT G K++
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS 227
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RHT+ +S G ++ +G+ GQLG G HLIP A S
Sbjct: 228 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPHKLEALS-------- 274
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
S++ +I+ G RH+ +T
Sbjct: 275 ------------NSFISQISGGWRHTMALT 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 186 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 245 LYTYGWSK----------YGQLGHGDLE----DHLIPHKLEALSNSFISQISGGWRHTMA 290
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 350
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 351 AWGRGTNGQLGIGESVDR-NFPKIIEAL 377
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 101/230 (43%), Gaps = 66/230 (28%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV---------K 108
CG +LA S+ G+L WG + GQ L G+ FP T +V +
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRK------FPSTTAPQIVEHLAGIPLAQ 195
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----------- 154
+AG AH ++++ +G +Y+WG E FG G + KDS
Sbjct: 196 ISAGEAHSMALSMSGNIYSWGKNE----------FGQLGLDHTESKDSPSLIEALDNQKV 245
Query: 155 ------GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G +AL T+ AG K + ++E L PCLV
Sbjct: 246 EFLACGGSHTALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAE 291
Query: 209 NPGVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
G ++T++A G HTL +SD+G+V+ +G G EGQLG G+R +++P P
Sbjct: 292 LAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLP 341
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V G+ + +++AG H++ LS G ++ WG GQLG
Sbjct: 179 TTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLG-------------- 224
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
L+H S KD P L+ V+ +ACGG H+A++T
Sbjct: 225 --LDHTES-KDSPSLIE--------ALDNQKVEFLACGGSHTALLT 259
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 42/238 (17%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P+
Sbjct: 82 PRRLDSLSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNAGLVPYH 137
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 138 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 184
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLS 202
Q +P + + + S A + +SG++ +
Sbjct: 185 Q-PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQ---PT 240
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
PC V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 241 PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 298
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 166 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY- 224
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 225 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 275
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 30/123 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLE-----HAA 266
++ +VA G H+L+L+ G+V+ WGY GQ+G GS P P + CL+ + A
Sbjct: 146 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRVTGCLQSKVVVNIA 204
Query: 267 SGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVKEIACGGRHSAV 303
G+ + +V G V N +G+ G V+ +ACG H+ V
Sbjct: 205 CGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLV 264
Query: 304 VTD 306
+TD
Sbjct: 265 LTD 267
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 89/337 (26%), Positives = 134/337 (39%), Gaps = 94/337 (27%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AGS G+ + TE A P ++ ++ + + S S A+
Sbjct: 110 -------AGS-----DGQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV-----N 281
GQLGL +K++ T + I C EH A +L + G V
Sbjct: 216 MNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGAG 269
Query: 282 SSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 8 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 60
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 108
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 168
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
G HT +++ G ++GWG+G G LGLG R ++VP
Sbjct: 169 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP 204
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 75/270 (27%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 64 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 117
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG ++ G+ TE + K
Sbjct: 118 DSHCLAVTMEGEVQSWG---------------------RNQNGQLGLGDTEDSLVPQKIQ 156
Query: 173 GEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTLNPGVKIT 215
E ++ + ++ E + N GD L P VT G K++
Sbjct: 157 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS 216
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RHT+ +S G ++ +G+ GQLG G HLIP A S
Sbjct: 217 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPHKLEALS-------- 263
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
S++ +I+ G RH+ +T
Sbjct: 264 ------------NSFISQISGGFRHTMALT 281
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 175 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 234 LYTYGWSK----------YGQLGHGDLED----HLIPHKLEALSNSFISQISGGFRHTMA 279
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 280 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 339
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 340 AWGRGTNGQLGIGESVDR-NFPKIIEAL 366
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 272 GGFRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 330
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 331 AVTERNNVFAWG 342
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 52/246 (21%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVKAAAGWA 114
GG ++ + +GK+ T+GS GQ L +G + P P LP + A +
Sbjct: 959 GGYSHSIILTSNGKVFTFGSGS-FGQ--LGNGSTTKITSPVPVYGLPEPIKCIYTA--YF 1013
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++++ G +YTWG S +V R S KRA
Sbjct: 1014 HNLALSDVGRLYTWG-----SSPQVLRFHAQ----------------------SQKRARN 1046
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQV 233
++V + E + + D LSP LV T + I ++ G H+ ++S GQ+
Sbjct: 1047 QLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQL 1106
Query: 234 WGWGYGGEGQLGL-GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
+ WG +GQLG+ G R ++VPT L+ P ++ V+SS +G S +K
Sbjct: 1107 YTWGLNLDGQLGVSGIRERLVPTVTLV----------GPPSVI----VDSSSTSG-SLIK 1151
Query: 293 EIACGG 298
E+ CG
Sbjct: 1152 EVRCGA 1157
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 83/214 (38%), Gaps = 71/214 (33%)
Query: 59 GCGFALATS-ESGKLITWGSADDEGQSY--LTSGKH-GETPEPFPLP----TEASVVKAA 110
G G+A A + KL TWG + SY L G H +T P P+ V++ A
Sbjct: 801 GAGWAHAAHIRNHKLYTWGHS-----SYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVA 855
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++T G VY+WG + +G G TG++ QAP
Sbjct: 856 CGRNHSIALTTNG-VYSWG----------SNHYGQLG------TGRRG-----QAP---- 889
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
P LV I V+AG H+L +S
Sbjct: 890 -------------------------------YPMLVDSLSNELIVSVSAGQYHSLAISAS 918
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
GQ+W WG+G GQLG G+ I P L+ LE+
Sbjct: 919 GQLWTWGWGVYGQLGHGA-IDDCEKPKLLKSLEN 951
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 27/124 (21%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSW---------KDVCGGGCGFALATSE 68
+Y WG+ G P + +P P SW + CG AL T+
Sbjct: 815 LYTWGHSSYGCLGVGPHMTKTATPNPV------SWFVYIRVEVIQVACGRNHSIALTTN- 867
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVY 126
+ +WGS + GQ L +G+ G+ P P + + ++ +V +AG H ++++ +G+++
Sbjct: 868 --GVYSWGS-NHYGQ--LGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLW 922
Query: 127 TWGW 130
TWGW
Sbjct: 923 TWGW 926
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 109/285 (38%), Gaps = 54/285 (18%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
S + P P + G + + CG LA + G++ +WG + GQ L
Sbjct: 94 NSSDLFVPHPIKALQGLEIRQIA---CGDSHCLAVTADGEVYSWGR-NQNGQLGLGDTDD 149
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P SV AAG H +VT++G++Y WGW G G+
Sbjct: 150 SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGW-------------GRYGNLGL 196
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTL 201
G + LP E D++ R T + + + GD L
Sbjct: 197 GDRGDR-MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL 255
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
P V IT+V+ G RHT+ L++ G+++GWG+ GQ+G G + +P LI
Sbjct: 256 LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-VDDHTSPQLISI 314
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G+ R V +++CG RH+ VTD
Sbjct: 315 ---------------------PGQHQR--VVQVSCGWRHTVAVTD 336
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 66/202 (32%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAA 110
+C CG+ +A S+SGKL T+G + GQ L G + + P E ++ + +
Sbjct: 216 MCMVACGWRHTIAVSQSGKLYTYGWSK-YGQ--LGHGDYADHLLPHQVAALAEFNITQVS 272
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
GW H V++TEAG++Y WGW + FG GS
Sbjct: 273 GGWRHTVALTEAGKLYGWGWNK----------FGQVGS---------------------- 300
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--KITKVAAGGRHTLILS 228
GD SP L+++ PG ++ +V+ G RHT+ ++
Sbjct: 301 ------------------------GDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVT 335
Query: 229 DMGQVWGWGYGGEGQLGLGSRI 250
D V+ WG G GQLG G +
Sbjct: 336 DKNNVYSWGRGTSGQLGHGDAV 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 62/159 (38%), Gaps = 18/159 (11%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGK 156
E S+V A S T +Y+WGW DFG G F
Sbjct: 58 EISLVACGADHTTAYSATRL-TIYSWGWG----------DFGRLGHGNSSDLFVPHPIKA 106
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
L Q D S R ++ GD +L P + GV +
Sbjct: 107 LQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKM 166
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
+AAG HT ++D G+++GWG+G G LGLG R +M+P
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLP 205
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 51/257 (19%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ + +V
Sbjct: 149 KSIIQIACGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFASIPTPQAVEHLSGVPLV 205
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR------------ECVPSAKVTRD-----FGSAGSFQ 150
+ +AG AH ++++ +G VY+WG E PS T D F + G
Sbjct: 206 QISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACG--- 262
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
G +AL T AG+ + +S + E L P LVT
Sbjct: 263 ----GSHTALLTTDGLVFTFGAGK--YGQLGHNSTQNE------------LRPRLVTELA 304
Query: 211 GVKITKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPC---LEHA 265
G ++T++A G RHTL +SD+G+V+ +G G EGQLG G+ +++P P +P L+
Sbjct: 305 GNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFE 364
Query: 266 ASGKDRPLLVRQGSVNS 282
+ D+ L++ G S
Sbjct: 365 SRTSDKELVMIAGGNQS 381
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP----HL--IPCLEHAAS 267
I ++A G H+L LS G+++ WG GQLG+G +PTP HL +P ++ +A
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAG 210
Query: 268 GKDRPLLVRQGSVNSSGKA-----------GRSY-----------VKEIACGGRHSAVVT 305
L G+V S G+ G + V+ +ACGG H+A++T
Sbjct: 211 KAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT 270
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 20 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 72
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 73 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 120
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 121 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 180
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
G HT +++ G ++GWG+G G LGLG R ++VP
Sbjct: 181 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP 216
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 75/270 (27%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 76 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 129
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG ++ G+ TE + K
Sbjct: 130 DSHCLAVTMEGEVQSWG---------------------RNQNGQLGLGDTEDSLVPQKIQ 168
Query: 173 GEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTLNPGVKIT 215
E ++ + ++ E + N GD L P VT G K++
Sbjct: 169 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS 228
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RHT+ +S G ++ +G+ GQLG G HLIP A S
Sbjct: 229 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPHKLEALS-------- 275
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
S++ +I+ G RH+ +T
Sbjct: 276 ------------NSFISQISGGWRHTMALT 293
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 187 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 246 LYTYGWSK----------YGQLGHGDLE----DHLIPHKLEALSNSFISQISGGWRHTMA 291
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 292 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 351
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 352 AWGRGTNGQLGIGESVDR-NFPKIIEAL 378
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 284 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 342
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 343 AVTERNNVFAWG 354
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 40/221 (18%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTANQ-PIPRRVTSSLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC + L GV++ +VA
Sbjct: 184 VNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQS---TPCRLALQ-GVRVQRVAC 239
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 240 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 280
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P L + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQSTPCRLALQGVRVQRVACGYAHTLVLTDEGQVYAWG 257
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K +V E+ACG HS V+T
Sbjct: 112 -TNHGLVPC---------------HISTNLSNK----HVIEVACGSYHSLVLT 144
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 118/290 (40%), Gaps = 54/290 (18%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E+S I + L + K+VC GG A+ T SG+LI WG G L G
Sbjct: 22 GAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVIT-HSGELIVWGYG---GCGQLGLG 77
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ P + + +V+ + H ++ E G +YTWG C S K+ GS
Sbjct: 78 DLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWG---CNKSGKL-----GIGSL 129
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS--SAREESENPA------------SG 195
+ P +K E+V+K S +A N A G
Sbjct: 130 NVNLNNNIICTP----QLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHG 185
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D +P L+ G+ + + GG HT IL + G+V+ G G G+LG GS+ + +
Sbjct: 186 DTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSK-EDIYI 244
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ QGS+ + +KE++ G +HSAV+T
Sbjct: 245 PKLL-----------------QGSLTNKS------IKEVSLGYQHSAVIT 271
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV K+ KV+ G HT L+D+ + + WG G +G+LG G V TP LI
Sbjct: 140 TPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDT-NDVYTPKLIES 198
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L AG S VK I CGG H+A++ +
Sbjct: 199 L-----------------------AGLS-VKNIVCGGHHTAILLN 219
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 33/128 (25%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASG 268
+I +V GG H+ +++ G++ WGYGG GQLGLG +K + P ++ +++ + S
Sbjct: 43 RIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGD-LKDIVIPRVMTSIKNVINVSCSD 101
Query: 269 KDRPLLVRQGSV-----NSSGKAG-----------------------RSYVKEIACGGRH 300
+ ++ G + N SGK G V +++CG H
Sbjct: 102 RHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFH 161
Query: 301 SAVVTDMS 308
+A +TD++
Sbjct: 162 TACLTDLN 169
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 8 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 60
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 61 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 108
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 168
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
G HT +++ G ++GWG+G G LGLG R ++VP
Sbjct: 169 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP 204
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 75/270 (27%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 64 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 117
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG ++ G+ TE + K
Sbjct: 118 DSHCLAVTMEGEVQSWG---------------------RNQNGQLGLGDTEDSLVPQKIQ 156
Query: 173 GEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTLNPGVKIT 215
E ++ + ++ E + N GD L P VT G K++
Sbjct: 157 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS 216
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RHT+ +S G ++ +G+ GQLG G HLIP A S
Sbjct: 217 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPHKLEALS-------- 263
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
S++ +I+ G RH+ +T
Sbjct: 264 ------------NSFISQISGGWRHTMALT 281
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 175 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 234 LYTYGWSK----------YGQLGHGDLED----HLIPHKLEALSNSFISQISGGWRHTMA 279
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 280 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 339
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 340 AWGRGTNGQLGIGESVDR-NFPKIIEAL 366
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 272 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 330
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 331 AVTERNNVFAWG 342
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G +Y+WG EC G + KD G
Sbjct: 202 HSMALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ +G N V+ +ACGG HSA++T
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLT 259
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 78/206 (37%), Gaps = 29/206 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDM 307
V +IACG H+ A V+D+
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDL 314
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G +Y+WG EC G + KD G
Sbjct: 202 HSMALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ +G N V+ +ACGG HSA++T
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLT 259
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 78/206 (37%), Gaps = 29/206 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDM 307
V +IACG H+ A V+D+
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDL 314
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G +Y+WG EC G + KD G
Sbjct: 202 HSMALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ +G N V+ +ACGG HSA++T
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLT 259
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 78/206 (37%), Gaps = 29/206 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDM 307
V +IACG H+ A V+D+
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDL 314
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 82 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V+ G+++ +VA
Sbjct: 184 VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVSALQGIRVQRVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 241 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIR 234
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 235 VQRVACGYAHTLVLTD 250
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 144
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 108/285 (37%), Gaps = 54/285 (18%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
S + P P + G + + CG LA + G++ +WG + GQ L
Sbjct: 94 NSSDLFVPHPIKALQGLEIRQIA---CGDSHCLAVTADGEVYSWGR-NQNGQLGLGDTDD 149
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P SV AAG H +VT+ G++Y WGW G G+
Sbjct: 150 SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGW-------------GRYGNLGL 196
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTL 201
G + LP E D++ R T + + + GD L
Sbjct: 197 GDRGDR-MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL 255
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
P V IT+V+ G RHT+ L++ G+++GWG+ GQ+G G + +P LI
Sbjct: 256 LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-VDDHTSPQLISI 314
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G+ R V +++CG RH+ VTD
Sbjct: 315 ---------------------PGQHQR--VVQVSCGWRHTVAVTD 336
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 66/202 (32%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAA 110
+C CG+ +A S+SGKL T+G + GQ L G + + P E ++ + +
Sbjct: 216 MCMVACGWRHTIAVSQSGKLYTYGWSK-YGQ--LGHGDYADHLLPHQVAALAEFNITQVS 272
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
GW H V++TEAG++Y WGW + FG GS
Sbjct: 273 GGWRHTVALTEAGKLYGWGWNK----------FGQVGS---------------------- 300
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--KITKVAAGGRHTLILS 228
GD SP L+++ PG ++ +V+ G RHT+ ++
Sbjct: 301 ------------------------GDVDDHTSPQLISI-PGQHQRVVQVSCGWRHTVAVT 335
Query: 229 DMGQVWGWGYGGEGQLGLGSRI 250
D V+ WG G GQLG G +
Sbjct: 336 DKNNVYSWGRGTSGQLGHGDAV 357
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 62/159 (38%), Gaps = 18/159 (11%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGK 156
E S+V A S T +Y+WGW DFG G F
Sbjct: 58 EISLVACGADHTTAYSATRL-TIYSWGWG----------DFGRLGHGNSSDLFVPHPIKA 106
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
L Q D S R ++ GD +L P + GV +
Sbjct: 107 LQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKM 166
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
+AAG HT ++D G+++GWG+G G LGLG R +M+P
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLP 205
>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
Length = 453
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 37/208 (17%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
LAT+ +G++ +WG G L +G + P P P+ + + A G H +++
Sbjct: 89 VLATTNAGEVYSWG---HNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMAL 145
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ---APPSDKRAGEEV 176
+ GE++ WG C G GS G S PT + A K+
Sbjct: 146 SSEGEIFAWGQNNC----------GQVGS------GTTSNQPTPRKVTACIGSKKCISIA 189
Query: 177 VKRRKTSSAREESE----------NPASGDEFFTLSPC-LVTLNPGVKITKVAAGGRHTL 225
+ + +A + E G+ +PC LV LN V IT++A G HTL
Sbjct: 190 CGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLN-NVFITQIACGYAHTL 248
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
L+D G ++ WG GQLG G++ M+
Sbjct: 249 GLTDEGSLYAWGANSYGQLGTGNKANMI 276
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 95/234 (40%), Gaps = 32/234 (13%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 96 GTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 151
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
P + T V++ A G H + +T GEVYTWG + ++
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 198
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL- 201
G ST Q +P + + + S A E+ +G+ L
Sbjct: 199 GQVGSGSTANQ-PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 257
Query: 202 ------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+PC + G+++ +VA G HTL+L+D GQ++ WG GQLG G++
Sbjct: 258 SSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 311
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC V+ N K+ +VA G H+++L+ G+V+ WGY GQ+G GS P P +
Sbjct: 157 LVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRV 215
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 216 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 275
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 276 VQRVACGCAHTLVLTD 291
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 190 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY- 248
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G AH + +T+ G++Y WG
Sbjct: 249 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG------- 299
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 300 ---------ANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQS 345
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H ++ ++ G+V+ WG+ QLG G+
Sbjct: 97 TGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 152
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N K V E+ACG HS V+T
Sbjct: 153 --TNHGLVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLT 185
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H +++ +G +Y+WG EC G + KD G
Sbjct: 202 HSTALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 28/121 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
KI ++ G H+L LS G+++ WG GQLG+G + TP + +P + +A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 267 SGKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVV 304
L G++ S GK G + K+ +ACGG HSA++
Sbjct: 199 GEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Query: 305 T 305
T
Sbjct: 259 T 259
Score = 40.8 bits (94), Expect = 0.88, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 78/206 (37%), Gaps = 29/206 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDM 307
V +IACG H+ A V+D+
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDL 314
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
G HT +++ G ++GWG+G G LGLG R ++VP
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP 215
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 75/270 (27%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG ++ G+ TE + K
Sbjct: 129 DSHCLAVTMEGEVQSWG---------------------RNQNGQLGLGDTEDSLVPQKIQ 167
Query: 173 GEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTLNPGVKIT 215
E ++ + ++ E + N GD L P VT G K++
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMS 227
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RHT+ +S G ++ +G+ GQLG G HLIP A S
Sbjct: 228 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPHKLEALS-------- 274
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
S++ +I+ G RH+ +T
Sbjct: 275 ------------NSFISQISGGWRHTMALT 292
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 186 AVTEDGDLYGWGWGR-YGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 245 LYTYGWSK----------YGQLGHGDLE----DHLIPHKLEALSNSFISQISGGWRHTMA 290
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 350
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 351 AWGRGTNGQLGIGESVDR-NFPKIIEAL 377
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG + GQ L GK ++ P+ + +
Sbjct: 36 KNIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGKIFDSTTAPQIVEHLSGVPLA 92
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
+ +AG +H ++++ +G +Y+WG DFG G D S + +
Sbjct: 93 QISAGKSHSMALSVSGNIYSWG----------RNDFGQLGLGHTDDKDFPSLIEALENQK 142
Query: 168 SDKRA----------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
+ A + +V + N + L PCLVT G ++T+V
Sbjct: 143 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNE----LRPCLVTKLAGNRVTQV 198
Query: 218 AAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIP 260
A G +HTL +SD+G+V+ +G G EGQLG G+ +++P P +P
Sbjct: 199 ACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLP 243
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 30/137 (21%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG P LI
Sbjct: 77 TTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDK-DFPSLI 135
Query: 260 PCLEH------AASGKDRPLLVRQGSVNS--SGKAGR--------------------SYV 291
LE+ A G LL + G V + +GK G+ + V
Sbjct: 136 EALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRV 195
Query: 292 KEIACGGRHS-AVVTDM 307
++ACG +H+ A V+D+
Sbjct: 196 TQVACGRQHTLAYVSDL 212
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 28/121 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAAS 267
I ++ G H+L LS G+++ WG GQLG+G P ++ L ++
Sbjct: 37 NIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISA 96
Query: 268 GKDRPL-LVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVV 304
GK + L G++ N G+ G + V+ +ACGG H+A++
Sbjct: 97 GKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALL 156
Query: 305 T 305
T
Sbjct: 157 T 157
>gi|75076912|sp|Q4R828.1|RCCD1_MACFA RecName: Full=RCC1 domain-containing protein 1
gi|67968774|dbj|BAE00744.1| unnamed protein product [Macaca fascicularis]
Length = 376
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 316
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 77/193 (39%), Gaps = 20/193 (10%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGRVELS--GSASGAAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTL 201
S G G AL AP S R GE + A EE ++P + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHSVVPEAVEE-DDPGGEAQIGRLPL 136
Query: 202 SPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P ++ ++ G H L+L GQV+ WG G GQLG G+ +
Sbjct: 137 LPCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-L 195
Query: 251 KMVPTPHLIPCLE 263
+ P L+ L+
Sbjct: 196 EAELEPRLLEALQ 208
>gi|428170480|gb|EKX39405.1| hypothetical protein GUITHDRAFT_59944, partial [Guillardia theta
CCMP2712]
Length = 234
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 109/251 (43%), Gaps = 52/251 (20%)
Query: 63 ALATSESGKLITWGSADDEGQSYL---TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
+L +G ++ WGS D GQ L S G + P ++V AAG H +++
Sbjct: 8 SLLLFSNGSVLAWGSNSD-GQLGLPPSCSDAAGHLLQGLP-----AIVSVAAGHRHSLAL 61
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK- 178
T G VY WG VP G G +ST + + + + R E VV+
Sbjct: 62 TADGSVYAWG--ANVP--------GQLGDGSLESTWRPTCVLS-------SRGSERVVRV 104
Query: 179 ---RRKTSSAREESENPASGDEFF-----------TLSPCLVTLNPGVKITKVAAGGRHT 224
R + + A G + F L P V L GV++ ++AAGG H+
Sbjct: 105 AAGRAHSMALLSNGTVMAWGWDAFGQLGQEEPQGAALRPRAVALPQGVRVCQIAAGGVHS 164
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQGSV- 280
L L + GQVWGWG G GQ+G G R+ P + LE A A+G L V +G +
Sbjct: 165 LALDEKGQVWGWGGNGCGQVGEG-RVSYSSRP--VVVLEEASSIAAGASHSLAVARGGLY 221
Query: 281 ----NSSGKAG 287
N++G+ G
Sbjct: 222 GWGSNANGELG 232
>gi|403173682|ref|XP_003332733.2| hypothetical protein PGTG_14398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170648|gb|EFP88314.2| hypothetical protein PGTG_14398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 694
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 94/241 (39%), Gaps = 82/241 (34%)
Query: 32 SPEKSPILSPIP---ARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
SP+ P + P AR+C GDS ++A SE G+L+ WGS
Sbjct: 277 SPQPDPESNRTPFKAARVCAGDS----------VSVAVSEEGELVAWGSFRSNDGLLGFD 326
Query: 89 GKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
G G +P+ +PT S V + G+ H +++T G VY+WG
Sbjct: 327 GMVGTSPKQL-VPTRVSNLREYPVSQVVCGYDHVLALTTDGHVYSWG------------- 372
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
G+Q L G ++++RRK + L+
Sbjct: 373 -----------NGQQQQL------------GRKIIERRKKNG----------------LA 393
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-------RIKMVPT 255
P ++L KI + GG H+ + + G V+GWG GQLG+ S I VPT
Sbjct: 394 PERLSLK---KIVLLGTGGSHSFAVHENGTVYGWGLNTRGQLGISSEEAGWENEIVSVPT 450
Query: 256 P 256
P
Sbjct: 451 P 451
>gi|297697477|ref|XP_002825883.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pongo
abelii]
Length = 376
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + KD+T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLVEDGETVAKDAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 33/128 (25%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L+
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLVE 251
Query: 261 CLEHAASGKDRPLLVRQGS-VNSSGKA----------------------GRSYVKEIACG 297
E A KD L GS V +G A G VK +CG
Sbjct: 252 DGETVA--KDATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPLGSDAVK-ASCG 308
Query: 298 GRHSAVVT 305
RH+AVVT
Sbjct: 309 SRHTAVVT 316
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 206
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L QG V + E+A GG HS V++
Sbjct: 207 L--------------QGLV----------MAEVAAGGWHSVCVSE 227
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +A
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKAV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+ + +VA
Sbjct: 208 VNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIHVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G +
Sbjct: 199 TGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIH 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPCYI---------------STNLSNKQ----VIEVACGSYHSLVLT 168
>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
Length = 531
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAA 110
D+ G LA S++G++ +WG G L +G G+ P + T +++ A
Sbjct: 78 DIAFGSGPHVLAVSKNGEMYSWG---HNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVA 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ GE++ WG C G GS ST Q A +K
Sbjct: 135 CGSHHSMALSQEGEIFAWGQNNC----------GQVGS---GSTTNQPTPRKVVAVIGNK 181
Query: 171 RAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A + + + E E G+ +PC V GV I+++ G
Sbjct: 182 MALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVIISQLVCG 241
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
HTL LSD G ++ WG GQLG G++ V +P +P
Sbjct: 242 YAHTLALSDEGSLFSWGANSYGQLGTGNKANQV-SPSKVP 280
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG D GQ L G+ TPE + +V
Sbjct: 152 KNIIQITCGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLV 208
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP- 166
+ +AG AH ++++ +G VY+WG +C G ++ K+S AL ++
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKESPSCIEALDDQKVEF 261
Query: 167 ------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ +V + N + L P LVT G ++T++A G
Sbjct: 262 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIACG 317
Query: 221 GRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
+HTL +SD G+V+ +G G EGQLG G+R +++P P
Sbjct: 318 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 355
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 28/121 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
I ++ G H+L LS G+++ WG +GQLG+G TP + +P ++ +A
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212
Query: 267 SGKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVV 304
L G+V S G+ G +Y KE +ACGG H+A++
Sbjct: 213 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALL 272
Query: 305 T 305
T
Sbjct: 273 T 273
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 29/205 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 207
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S R + G + SP + K+ +A GG
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG ++ + RP LV
Sbjct: 268 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------- 303
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTD 306
+G G V +IACG +H+ A V+D
Sbjct: 304 TGLVGNR-VTQIACGRQHTLAYVSD 327
>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 558
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 14/216 (6%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
D+ GG +LA + +G ++ WG ++ GQ + + P LP + +VV
Sbjct: 89 DTTVTAVAGGDSHSLALTSAGAVLAWGE-NNFGQLGTGNNLNSSVPITVALPPDTTVVAI 147
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
AA H +++T AG V WG A G+ +F + T LP +
Sbjct: 148 AASHGHSLALTSAGAVLAWG-------ANNVGQLGNGNTFNSN-TPVTVNLPPGTTVATI 199
Query: 170 KRAGEEVVKRRKTSSARE----ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ T +A + + +L P VTL P IT +AAG ++L
Sbjct: 200 AAGTNHSLAITSTGAALAWGGNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSL 259
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP 260
++ G WG GQLG G+ ++P +P
Sbjct: 260 AITSTGTALAWGGNSNGQLGTGNNADSLIPIAVALP 295
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 13/195 (6%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
G +LA + +G ++ WG A++ GQ + + TP LP +V AAG H +++T
Sbjct: 152 GHSLALTSAGAVLAWG-ANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAIT 210
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G WG + +A S + + LP + +
Sbjct: 211 STGAALAWGGNGNGQLGNNS----TATSLEPIAV----TLPPSTTITAIAAGSSYSLAIT 262
Query: 181 KTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
T +A N +G+ +L P V L PG IT +AAG H+L ++ G W
Sbjct: 263 STGTALAWGGNSNGQLGTGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAW 322
Query: 237 GYGGEGQLGLGSRIK 251
G GQLG+G+
Sbjct: 323 GGNSRGQLGIGTTTN 337
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 17/175 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET--PEPFPLPTEASVVKAAAGWAHC 116
G ++LA + +G + WG + GQ L +G + ++ P LP ++ AAG+ H
Sbjct: 254 GSSYSLAITSTGTALAWG-GNSNGQ--LGTGNNADSLIPIAVALPPGTTITSIAAGFTHS 310
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++VT G WG R G+ T LP + ++
Sbjct: 311 LAVTSTGTALAWGGNS--------RGQLGIGTTTNSDTPVIVNLPPDTTITTNDGGFFHS 362
Query: 177 VKRRKTSSAREESENPA----SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ T +A N + +G+ +L P V L G KIT +AAGG H+L L
Sbjct: 363 LGSMSTGAALAWGNNFSGQLGTGNNTNSLDPIAVALPSGTKITTIAAGGGHSLAL 417
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 25/178 (14%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
S ++ WG A++ GQ S P LP + +V A G +H +++T AG V W
Sbjct: 56 SDTILAWG-ANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAW 114
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-------GEEVVKRRK 181
G +FG G+ S++P A P D G +
Sbjct: 115 G----------ENNFGQLGTGNN----LNSSVPITVALPPDTTVVAIAASHGHSLALTSA 160
Query: 182 TSSAREESENP---ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + N +G+ F + +P V L PG + +AAG H+L ++ G W
Sbjct: 161 GAVLAWGANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLAITSTGAALAW 218
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 27/138 (19%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTPHLIP 260
+P V+L P +T VA G H+L L+ G V WG GQLG G+ + VP +P
Sbjct: 80 APVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAWGENNFGQLGTGNNLNSSVPITVALP 139
Query: 261 ----CLEHAASGKDRPLLVRQGSV-----NSSGKAGR-----------------SYVKEI 294
+ AAS L G+V N+ G+ G + V I
Sbjct: 140 PDTTVVAIAASHGHSLALTSAGAVLAWGANNVGQLGNGNTFNSNTPVTVNLPPGTTVATI 199
Query: 295 ACGGRHSAVVTDMSYPIA 312
A G HS +T +A
Sbjct: 200 AAGTNHSLAITSTGAALA 217
>gi|380793883|gb|AFE68817.1| RCC1 domain-containing protein 1, partial [Macaca mulatta]
Length = 339
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 129 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 177
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 178 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 227
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 228 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 278
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 279 TRTGELYTWGWGKYGQLG 296
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 162 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 219
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 220 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 279
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+ L
Sbjct: 112 PFYRPLDPALRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEAL 170
Query: 263 E 263
+
Sbjct: 171 Q 171
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
LCG G G LAT E G++ TWG S L +G P + T
Sbjct: 111 LCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNGTTNHGLVPCQVSTNLV 166
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H + +T GEVYTWG + ++G ST Q +P
Sbjct: 167 NKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNSGQVGSGSTANQ-PIPR 212
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPG 211
+ + + S A E+ +G+ L +PC + G
Sbjct: 213 RVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 272
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+++ +VA G HTL+L+D GQ++ WG GQLG G++
Sbjct: 273 IRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 310
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC V+ N K+ +VA G H+++L+ G+V+ WGY GQ+G GS P P +
Sbjct: 156 LVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRV 214
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 215 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 274
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 275 VQRVACGCAHTLVLTD 290
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 189 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY- 247
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G AH + +T+ G++Y WG
Sbjct: 248 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG------- 298
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 299 ---------ANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQS 344
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H ++ ++ G+V+ WG+ QLG G+
Sbjct: 96 TGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 151
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N K V E+ACG HS V+T
Sbjct: 152 --TNHGLVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLT 184
>gi|402914058|ref|XP_003919452.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Papio
anubis]
gi|402914060|ref|XP_003919453.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Papio
anubis]
Length = 376
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 76/192 (39%), Gaps = 18/192 (9%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V G C +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGRVELSGSASC--AAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE-FFTLS 202
S G G AL AP S R GE + A EE + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHNVVPEAVEEDDPDGEAQTGRLPLL 137
Query: 203 PCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
PC L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++
Sbjct: 138 PCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LE 196
Query: 252 MVPTPHLIPCLE 263
P L+ L+
Sbjct: 197 AELEPRLLEALQ 208
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G V A G VK ++CG RH+AVV
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVK-VSCGSRHTAVV 315
Query: 305 T 305
T
Sbjct: 316 T 316
>gi|302565090|ref|NP_001180861.1| RCC1 domain-containing protein 1 [Macaca mulatta]
Length = 376
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 316
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 77/193 (39%), Gaps = 20/193 (10%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGRVELS--GSASGAAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTL 201
S G G AL AP S R GE + A EE ++P + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHNVVPEAVEE-DDPGGEAQIGRLPL 136
Query: 202 SPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P ++ ++ G H L+L GQV+ WG G GQLG G+ +
Sbjct: 137 LPCARAYVSPRPPFYRPLAPQLRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-L 195
Query: 251 KMVPTPHLIPCLE 263
+ P L+ L+
Sbjct: 196 EAELEPRLLEALQ 208
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 33/218 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG + L +G P + T S V++ A G
Sbjct: 92 GSGPHIVLATTE-GEVFTWGH---NAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGS 147
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG ++G ST Q +P R
Sbjct: 148 YHSLVLTSDGEVFAWGCN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNRVV 193
Query: 174 EEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A +S +G+ L +PC + G+++ +VA G
Sbjct: 194 VNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYA 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 254 HTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 291
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
PIP R+ G + V CG ++A +SG++ WG + GQ L S + TP
Sbjct: 179 PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWG-YNGNGQLGLGSSGNHSTPCRI 237
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
V + A G+AH + +T+ G+VY WG
Sbjct: 238 AALQGIRVQRVACGYAHTLVLTDDGQVYAWG 268
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 31/134 (23%)
Query: 203 PCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP- 260
PC ++ N K + +VA G H+L+L+ G+V+ WG GQ+G GS P P +
Sbjct: 128 PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQ-PIPRRVTG 186
Query: 261 CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVK 292
CL+ + A G+ + +V G V N +G+ G V+
Sbjct: 187 CLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQ 246
Query: 293 EIACGGRHSAVVTD 306
+ACG H+ V+TD
Sbjct: 247 RVACGYAHTLVLTD 260
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 38/236 (16%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ +WG + GQ + HG P
Sbjct: 89 PRRLDSLSDKKIACLSYGSGPHIVLATTE-GEVFSWGH-NAYGQLGNGTINHGLVPSHIS 146
Query: 100 LP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+ V + A G H + +T GEV+ WG+ ++G ST Q
Sbjct: 147 TNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ- 192
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--------------ASGDEFFTLSPC 204
A+P + + + S A ++ +SG++ +PC
Sbjct: 193 AIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPC 249
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 29/135 (21%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L P ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS +
Sbjct: 140 LVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVT 199
Query: 260 PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YV 291
CL+ + A G+ + +V G V N +G+ G V
Sbjct: 200 GCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRV 259
Query: 292 KEIACGGRHSAVVTD 306
+ +ACG H+ V+TD
Sbjct: 260 QRVACGYAHTLVLTD 274
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S IP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K++ CG +LA S+ G+L WG D GQ L G+ TPE + +V
Sbjct: 147 KNIIQITCGDYHSLALSKGGELFAWGQNLD-GQ--LGVGRIFASTSTPEIVENLSGVPLV 203
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP- 166
+ +AG AH ++++ +G VY+WG +C G ++ K+S AL ++
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDC-------GQLGLGHTYNKESPSCIEALDDQKVEF 256
Query: 167 ------PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ +V + N + L P LVT G ++T++A G
Sbjct: 257 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNE----LRPRLVTGLVGNRVTQIACG 312
Query: 221 GRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
+HTL +SD G+V+ +G G EGQLG G+R +++P P
Sbjct: 313 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRP 350
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 28/121 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
I ++ G H+L LS G+++ WG +GQLG+G TP + +P ++ +A
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207
Query: 267 SGKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVV 304
L G+V S G+ G +Y KE +ACGG H+A++
Sbjct: 208 GEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALL 267
Query: 305 T 305
T
Sbjct: 268 T 268
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 29/205 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E ++++ G H +++++ GE++ WG + V R F S + + S +P
Sbjct: 146 EKNIIQITCGDYHSLALSKGGELFAWG-QNLDGQLGVGRIFASTST--PEIVENLSGVPL 202
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S R + G + SP + K+ +A GG
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 262
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT +L+ G V+ +G G GQLG ++ + RP LV
Sbjct: 263 HTALLTKSGLVFTFGDGKYGQLG-----------------HNSTQNELRPRLV------- 298
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTD 306
+G G V +IACG +H+ A V+D
Sbjct: 299 TGLVGNR-VTQIACGRQHTLAYVSD 322
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 79/327 (24%), Positives = 117/327 (35%), Gaps = 88/327 (26%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
VY WG GT +K S PA + + K V CG + A +++G + TWG
Sbjct: 653 VYSWG---GTLHKKVGQRSGKPAPIQQLNK-KGVIQVDCGDYHSAAITQNGDIYTWGGGG 708
Query: 80 ---DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
++GQ L K E PE +VK + G H +++T E++ WG
Sbjct: 709 QDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTSENELFGWG------- 761
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPT------------------EQAPPSDKRAGEEVV- 177
AG F + T K P E + + K G +
Sbjct: 762 ---------AGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLL 812
Query: 178 -----------KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
R+ SEN +TL+ KI K+AAG H+L
Sbjct: 813 LTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTK--------KKIIKIAAGWNHSLA 864
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
LSD ++ G+G GQLGLG H++ + GK+
Sbjct: 865 LSDQNDIFACGHGARGQLGLGDEESRTIFTHVV-----SLGGKN---------------- 903
Query: 287 GRSYVKEIACGGRHSAVVTDMSYPIAR 313
I+ GG HS V D ++P+ +
Sbjct: 904 ----TATISAGGDHSWAVLDQNFPVKQ 926
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 52/253 (20%), Positives = 91/253 (35%), Gaps = 74/253 (29%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG LA +++ ++ +WG G + G+ P P + V++ G H
Sbjct: 638 ACGDYHTLALTDTDQVYSWG-----GTLHKKVGQRSGKPAPIQQLNKKGVIQVDCGDYHS 692
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++T+ G++YTWG G + K G
Sbjct: 693 AAITQNGDIYTWG--------------GGGQDYNKGQLGLGHV----------------- 721
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ ENP +FF G KI KV+ G HT+ L+ +++GW
Sbjct: 722 ----------KDIENPEK-LKFFE----------GKKIVKVSCGQFHTMALTSENELFGW 760
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G G+LG +H + + Q ++ + ++ I C
Sbjct: 761 GAGEFGELGTS---------------KHEYTPIRVKVNFNQYNILYENILFENSIQNIKC 805
Query: 297 GGRHSAVVTDMSY 309
GG H+ ++T+ Y
Sbjct: 806 GGHHTLLLTNNGY 818
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 10 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 62
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 63 VTCGADHTVAYSQSGXEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 110
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D + S R ++ GD +L P + G++I VAA
Sbjct: 111 IRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAA 170
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
G HT +++ G ++GWG+G G LGLG R ++VP
Sbjct: 171 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP 206
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 104/270 (38%), Gaps = 75/270 (27%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 66 GADHTVAYSQSGXEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 119
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG ++ G+ TE + K
Sbjct: 120 DSHCLAVTXEGEVQSWG---------------------RNQNGQLGLGDTEDSLVPQKIQ 158
Query: 173 GEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTLNPGVKIT 215
E ++ + ++ E + N GD L P VT G K +
Sbjct: 159 AFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXS 218
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RHT+ +S G ++ +G+ GQLG G HLIP A S
Sbjct: 219 XVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPHKLEALS-------- 265
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
S++ +I+ G RH+ +T
Sbjct: 266 ------------NSFISQISGGARHTXALT 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 77/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE A GW H +SV+ +G
Sbjct: 177 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 236 LYTYGWSK----------YGQLGHGDLED----HLIPHKLEALSNSFISQISGGARHTXA 281
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 282 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 341
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 342 AWGRGTNGQLGIGESVDR-NFPKIIEAL 368
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 274 GGARHTXALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 332
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 333 AVTERNNVFAWG 344
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 32/234 (13%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 60 GTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 115
Query: 90 --KHGETP-EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
HG P + V++ A G H + +T GEVYTWG + ++
Sbjct: 116 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 162
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL- 201
G ST Q +P + + + S A E+ +G+ L
Sbjct: 163 GQVGSGSTANQ-PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 221
Query: 202 ------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+PC + G+++ +VA G HTL+L+D GQ++ WG GQLG G++
Sbjct: 222 SSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 275
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 154 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGY- 212
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 213 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG------- 263
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 264 ---------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQS 309
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 203 PCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP- 260
PC V+ N K+ +VA G H+++L+ G+V+ WGY GQ+G GS P P +
Sbjct: 123 PCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRVTS 181
Query: 261 CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVK 292
CL+ + A G+ + +V G V N +G+ G V+
Sbjct: 182 CLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQ 241
Query: 293 EIACGGRHSAVVTD 306
+ACG H+ V+TD
Sbjct: 242 RVACGYAHTLVLTD 255
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H ++ ++ G+V+ WG+ QLG G+
Sbjct: 61 TGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 116
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H +PC Q S N K V E+ACG HS V+T
Sbjct: 117 --TNHGFVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLT 149
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 36/235 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 161
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ ++G ST
Sbjct: 162 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTAN 208
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + S A ++ +G+ L +PC
Sbjct: 209 Q-PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCR 267
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
+ G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 268 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIV 322
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 190 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGY- 248
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L SG + TP V + A G+AH + +T+ G+VY WG
Sbjct: 249 NGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 299
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 157 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 215
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 216 TGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIR 275
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 276 VQRVACGYAHTLVLTD 291
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 98 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 152
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 153 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 185
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 88/231 (38%), Gaps = 28/231 (12%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E +P+ P + G K+V GG L + G + T GS + GQ L
Sbjct: 13 GIGVEGNPVFEPRICHVFSGRGLKEVACGG-QHTLFLLQDGSVYTCGS-NSCGQ--LGHD 68
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
K G +PE + + G AH V+V E G+V+ WG G G
Sbjct: 69 KAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWG-------------AGDGGQL 115
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------EF 198
++ +P D + V + + + + +SG E
Sbjct: 116 GLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGET 175
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
LSP V G+ + ++ AGG H LS G V+GWG GQLGL +
Sbjct: 176 SKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDK 226
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/225 (21%), Positives = 84/225 (37%), Gaps = 24/225 (10%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLT 87
G SPE L G + + CG A +A +E G++ WG+ D T
Sbjct: 71 GNSPE-----------LVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLET 119
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
+ P + S+ + G HC++++ G+++TWG S ++ G
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNS---SGQLGLGKGETS 176
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS----GDEFFTLSP 203
+ +P Q G+ + + +N A D+ P
Sbjct: 177 KLSPSPVKSLAGIPLAQITA----GGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVP 232
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
C + ++ ++ G HT L+ G ++ +G G GQLG GS
Sbjct: 233 CHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGS 277
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
SP LV KIT V+ G H++ +++ GQV+ WG G GQLGL + V P L+
Sbjct: 73 SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKK 132
Query: 262 L-EHAAS----GKDRPL-LVRQGSV-----NSSGKAG 287
L +H+ S G + L R G + NSSG+ G
Sbjct: 133 LCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLG 169
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 28/120 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG----SRIKMVPTPHL--IPCLEHAAS 267
I++V G +H + LS GQ++ WG GQLGLG S++ P L IP + A
Sbjct: 138 ISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAG 197
Query: 268 GKDRPLLVRQGSV-----NSSGKAG----------------RSY-VKEIACGGRHSAVVT 305
G L G+V N +G+ G RS V I+CG H+A +T
Sbjct: 198 GDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALT 257
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 110/294 (37%), Gaps = 53/294 (18%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA +E GKL TWG + K P + +V+AA
Sbjct: 38 QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTG----KQSALPTEQ 164
G HC++V + G Y WG E +G G +KD+TG + A+P
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPEKKDNTGRPPRRDIAIPQRC 147
Query: 165 APPSDKR----AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
AP R G V + + GD P V V++ +A G
Sbjct: 148 APKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMVRL--IAVG 205
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLV 275
H L L + G +W WG GQLG G R + +P L + ++ AA G L
Sbjct: 206 AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 265
Query: 276 RQGSVNSSGKA--GR----------------------SYVKEIACGGRHSAVVT 305
G V G+ GR + +I+CGG HS VT
Sbjct: 266 DNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVT 319
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 15/157 (9%)
Query: 18 KETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
++ ++ WG Y + + P PIP + G + D+ GG + A +++G++
Sbjct: 214 EDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDNGEVYG 272
Query: 75 WGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
WG + + + K + P+ L + +V+ + G H V+VT G ++++G
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG---- 328
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
D G G +K +TG+ +P + PP +
Sbjct: 329 ------RGDHGRLGYGRKVTTGQPEEVPIDIPPPRGR 359
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 108/294 (36%), Gaps = 82/294 (27%)
Query: 77 SADDEGQSYLTSGKH----GETPEP-----------FPLPTEAS----VVKAAAGWAHCV 117
+ DD+G++Y G GE PE +P + V + AAG H V
Sbjct: 105 AVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSV 164
Query: 118 SVTEAGEVYTWGWRECVPSAKVTR-------------DFGSAGSF-----QKDST----- 154
+T G V+TWG + P +T+ + G+F Q+D T
Sbjct: 165 VLTREGHVWTWG--QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWG 222
Query: 155 -------GKQSALPTEQAPPSDKRAGEEVVKRR----KTSSAREESENPASG-------- 195
G P Q P +G +V +++ + E G
Sbjct: 223 NNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLG 282
Query: 196 ----DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
D+ + P V L G +I +++ GG H++ ++ G+++ +G G G+LG G ++
Sbjct: 283 FGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKV- 341
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P +P G+ + G K +ACGGRH+ +
Sbjct: 342 TTGQPEEVPIDIPPPRGRT--------------ENGHWIAKLVACGGRHTLALV 381
>gi|307199126|gb|EFN79836.1| X-linked retinitis pigmentosa GTPase regulator [Harpegnathos
saltator]
Length = 694
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 98/248 (39%), Gaps = 81/248 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + G +I WGS + EGQ L G G +P +P V + +AG+ H
Sbjct: 132 GSHHSMALTSDGGVIAWGS-NLEGQLGL-PGISGLVNKPTKVPIPEPVKEISAGYYHSAL 189
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+TE+G VY G E S K+ D +F KQ LP
Sbjct: 190 LTESGLVYVCGESE---SGKLGIDV----NFSTQVAPKQMQLP----------------- 225
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+P L VA GG HTL+L++ G ++ G
Sbjct: 226 -----------------------APAL----------HVACGGHHTLVLAENGNIYCSGS 252
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLG+G+ + V TP L+P +G++ S + +I+CG
Sbjct: 253 NASGQLGMGTNVSEVHTPKLLP----------------RGALQS------EIIVKISCGE 290
Query: 299 RHSAVVTD 306
HSA++T+
Sbjct: 291 SHSAILTE 298
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 26/96 (27%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G +I +VAAG H++ L+ G V WG EGQLGL +V P +P E
Sbjct: 123 GSRILQVAAGSHHSMALTSDGGVIAWGSNLEGQLGLPGISGLVNKPTKVPIPE------- 175
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
VKEI+ G HSA++T+
Sbjct: 176 -------------------PVKEISAGYYHSALLTE 192
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 31/205 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L +++G L +WG G S L +G + P + T VVK A G H +++
Sbjct: 94 VLVCTDNGDLYSWGH---NGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL 150
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T GEV+ WG+ C G GS T A P + A R E+
Sbjct: 151 TLEGEVFAWGYNNC----------GQVGS----GTTTNQATPRKVAACLGTRKVTEIACG 196
Query: 180 RKTSSAREESE-----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ +S A ++ G+ +PC V + + ++ G H + L+
Sbjct: 197 QTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALT 256
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMV 253
D G V+ WG GQLG G++ +V
Sbjct: 257 DEGSVYAWGANSYGQLGTGNKANLV 281
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 57/135 (42%), Gaps = 29/135 (21%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
LSP L+T N G K+ KVA G H+L L+ G+V+ WGY GQ+G G+ +
Sbjct: 123 LSPQLITTNLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVA 182
Query: 260 PCL------EHAASGKDRPLLVRQGSV-----NSSGKAG-----------------RSYV 291
CL E A L+ G V N +G+ G + V
Sbjct: 183 ACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIV 242
Query: 292 KEIACGGRHSAVVTD 306
+I CG H+ +TD
Sbjct: 243 VQIVCGYAHAMALTD 257
>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
CCMP526]
Length = 1021
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 108/255 (42%), Gaps = 44/255 (17%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAH 115
CG L ++ G+++T G+ + S HG PEP L E ++V+ AAG A
Sbjct: 804 ACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHG-VPEPVELFDEKTNIVEVAAGHAF 862
Query: 116 CVSVTEAGEVYTWGWRE---CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ +T+ G+++TWG E ++ D S A+P K+
Sbjct: 863 NLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYS-----------MEAVPLLVEALESKKV 911
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMG 231
+++ EE E G + L P + + G K+ +V GG HT +++ D
Sbjct: 912 VHVAAGHSHSAAVTEEGELYMWGMKIH-LEPQVFRVGEGDKVWQVGCGGSHTAVVTEDAH 970
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
Q++ +G G LG G+R P P L+ + G AGR V
Sbjct: 971 QLFTFGKGSSLCLGHGTR-SYTPHPKLV----------------------ADGLAGRGVV 1007
Query: 292 KEIACGGRHSAVVTD 306
K +ACG RH AV+TD
Sbjct: 1008 K-VACGHRHMAVITD 1021
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 113/309 (36%), Gaps = 81/309 (26%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAA 110
G ++ +E GKL TWG + HG++ P + +VK A
Sbjct: 692 LAAGLNYSAGVTEDGKLYTWGDGSNHKLG------HGDSKPVYRPRQVEALQDVKIVKVA 745
Query: 111 AGWAHCVSVTEAGEVYTWGWRECV---------------PSAKVTRDFGSAGSFQKDSTG 155
G H ++ E G ++TWGW + P KV R G
Sbjct: 746 CGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGC------- 798
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD-EFFTL---------SPCL 205
R G + T ++ E +G+ E+ L P
Sbjct: 799 ---------------RVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEP 843
Query: 206 VTL-NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVPTPHLI 259
V L + I +VAAG L+L+ G+++ WG +GQLGLG I M P L+
Sbjct: 844 VELFDEKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLV 903
Query: 260 PCLE-----HAASGKDRPLLVRQ--------GSVNSSGKAGR----SYVKEIACGGRHSA 302
LE H A+G V + ++ + R V ++ CGG H+A
Sbjct: 904 EALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIHLEPQVFRVGEGDKVWQVGCGGSHTA 963
Query: 303 VVTDMSYPI 311
VVT+ ++ +
Sbjct: 964 VVTEDAHQL 972
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 110/294 (37%), Gaps = 53/294 (18%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA +E GKL TWG + K P + +V+AA
Sbjct: 38 QNVCSVVAGSRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAA 97
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTG----KQSALPTEQ 164
G HC++V + G Y WG E +G G +KD+TG + A+P
Sbjct: 98 IGGWHCLAVDDQGRAYAWGGNE----------YGQCGEEPEKKDNTGRPPRRDIAIPQRC 147
Query: 165 APPSDKR----AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
AP R G V + + GD P V V++ +A G
Sbjct: 148 APKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMVRL--IAVG 205
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLV 275
H L L + G +W WG GQLG G R + +P L + ++ AA G L
Sbjct: 206 AFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 265
Query: 276 RQGSVNSSGKA--GR----------------------SYVKEIACGGRHSAVVT 305
G V G+ GR + +I+CGG HS VT
Sbjct: 266 DNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVT 319
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+ P PIP + G + D+ GG + A +++G++ WG + + + K +
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDNGEVYGWGRGEHGRLGFGDNDKSSK 291
Query: 94 -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ L + +V+ + G H V+VT G ++++G D G G +K
Sbjct: 292 MVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFG----------RGDHGRLGYGRKV 341
Query: 153 STGKQSALPTEQAPPSDK 170
+TG+ +P + PP +
Sbjct: 342 TTGQPEEVPIDIPPPRGR 359
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 109/296 (36%), Gaps = 72/296 (24%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEP----FPLPTEAS----VVKAAAGWAH 115
LA + G+ WG ++ GQ K T P +P + V + AAG H
Sbjct: 104 LAVDDQGRAYAWG-GNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTH 162
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTR-------------DFGSAGSF-----QKDST--- 154
V +T G V+TWG + P +T+ + G+F Q+D T
Sbjct: 163 SVVLTREGHVWTWG--QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWA 220
Query: 155 ---------GKQSALPTEQAPPSDKRAGEEVVKRR----KTSSAREESENPASG------ 195
G P Q P +G +V +++ + E G
Sbjct: 221 WGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGR 280
Query: 196 ------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
D+ + P V L G +I +++ GG H++ ++ G+++ +G G G+LG G +
Sbjct: 281 LGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRK 340
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ P +P G+ + G K +ACGGRH+ +
Sbjct: 341 V-TTGQPEEVPIDIPPPRGRT--------------ENGHWIAKLVACGGRHTLALV 381
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 97/237 (40%), Gaps = 38/237 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I LCG G G LAT E G++ TWG S L +G
Sbjct: 55 GTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE-GEVYTWGH---NAYSQLGNG 110
Query: 90 --KHGETP-EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
HG P + V++ A G H + +T GEVYTWG + ++
Sbjct: 111 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWG-------------YNNS 157
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-------------- 192
G ST Q +P + + + S A E+
Sbjct: 158 GQVGSGSTANQ-PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG 216
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+SG++ +PC + G+++ +VA G HTL+L+D GQ++ WG GQLG G++
Sbjct: 217 SSGNQ---PTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 270
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K V CG ++A E+G++ WG
Sbjct: 149 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG------- 258
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT D+ TS+A+ +S
Sbjct: 259 ---------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQS 304
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 31/134 (23%)
Query: 203 PCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP- 260
PC V+ N K+ +VA G H+++L+ G+V+ WGY GQ+G GS P P +
Sbjct: 118 PCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-PIPRRVTS 176
Query: 261 CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YVK 292
CL+ + A G+ + +V G V N +G+ G V+
Sbjct: 177 CLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQ 236
Query: 293 EIACGGRHSAVVTD 306
+ACG H+ V+TD
Sbjct: 237 RVACGYAHTLVLTD 250
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H ++ ++ G+V+ WG+ QLG G+
Sbjct: 56 TGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT---- 111
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H +PC Q S N K V E+ACG HS V+T
Sbjct: 112 --TNHGFVPC---------------QVSTNLVNKK----VIEVACGSHHSMVLT 144
>gi|395502432|ref|XP_003755585.1| PREDICTED: RCC1 domain-containing protein 1 [Sarcophilus harrisii]
Length = 357
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 44/199 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEA----SVVKAAAGW 113
G AL G++ TWG+ L HG E P P EA ++ + AAG
Sbjct: 149 GAEHALLLGGMGQVYTWGTGR------LGQLGHGALEAELVPRPVEALLGLAMAQVAAGG 202
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + V+EAG++Y WGW E Q ALP+ +K
Sbjct: 203 WHSLCVSEAGDLYIWGWNE----------------------SGQLALPSRTIAEREK--- 237
Query: 174 EEVVKRRKTSSAREESENPAS-GD----EFFTLS--PCLVTLNPGVKITKVAAGGRHTLI 226
V SS E++ PA+ GD +F + P L+ L G ++ K + G RHT +
Sbjct: 238 -TVAGASGLSSCSPEAKKPATDGDGDLAQFIAIQPFPALLDLPSGSEVIKASCGSRHTAV 296
Query: 227 LSDMGQVWGWGYGGEGQLG 245
++ G+++ WG+G GQLG
Sbjct: 297 VTRDGELYTWGWGKYGQLG 315
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTP 256
+ P L P +K ++ G H L+L MGQV+ WG G GQLG G+ ++VP P
Sbjct: 130 MQPFSQPLCPDLKARQLVLGAEHALLLGGMGQVYTWGTGRLGQLGHGALEAELVPRP 186
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G+ + +VAAGG H+L +S+ G ++ WG+ GQL L SR
Sbjct: 192 GLAMAQVAAGGWHSLCVSEAGDLYIWGWNESGQLALPSR 230
>gi|336118147|ref|YP_004572915.1| hypothetical protein MLP_24980 [Microlunatus phosphovorus NM-1]
gi|334685927|dbj|BAK35512.1| hypothetical protein MLP_24980 [Microlunatus phosphovorus NM-1]
Length = 463
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 132/347 (38%), Gaps = 95/347 (27%)
Query: 15 EECKETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
+E + T Y+WGY G + + + SP PARL G D+ GG F +A +ESG
Sbjct: 3 KEKQATYAYVWGYNNTGELGVN-HAARVYSPRPARLPAG--IVDLQGG-ANFTIALTESG 58
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+++TWGS ++ GQ S + TP+ LP AAG H V VT G + TWG
Sbjct: 59 RVLTWGS-NEHGQLGDGSRRPRRTPQQVRLPEGHRAAAIAAGTDHVVVVTTRGHLITWGR 117
Query: 131 ----------RECVPSAKVTRDFGSAGSFQKDSTGK-------------------QSALP 161
R+ S KV R A + +K + G Q L
Sbjct: 118 NHRGQLGTGDRDDRLSPKVVR----AETVRKVAAGDGISAAITPGGRLLTWGRNGQGQLA 173
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD----EFFTLSPCLVTLNPGVKIT-- 215
+ + P G +V+ K AR+ SE ++ D L+ L GV +
Sbjct: 174 QKGSVP----VGRDVL---KPIHARQVSEPVSAVDAGLRHLVVLTSDGDVLMFGVDVAGL 226
Query: 216 ----------------KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ AG HTL L+ G + GWG GQL G
Sbjct: 227 PLGKKMALPARWGQVRTIVAGEDHTLALTRRGVILGWGANDLGQLATGDS---------- 276
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
H S P++V+ V R V +I G RH +TD
Sbjct: 277 ---AHQLS----PVVVKLSGV-------RGQVTQIRAGHRHGLALTD 309
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP------EPFPLPTEASVVKAA-A 111
G G + A + G+L+TWG GQ L + G P +P + V A A
Sbjct: 148 GDGISAAITPGGRLLTWGR---NGQGQLA--QKGSVPVGRDVLKPIHARQVSEPVSAVDA 202
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H V +T G+V +G V A + GK+ ALP
Sbjct: 203 GLRHLVVLTSDGDVLMFG----VDVAGL-------------PLGKKMALPARWGQVRTIV 245
Query: 172 AGEE---VVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVK--ITKVAAGGRHT 224
AGE+ + RR + A+GD LSP +V L+ GV+ +T++ AG RH
Sbjct: 246 AGEDHTLALTRRGVILGWGANDLGQLATGDSAHQLSPVVVKLS-GVRGQVTQIRAGHRHG 304
Query: 225 LILSDMGQVWGWGYGGEGQLGLG 247
L L+D +V+ WG G G +G G
Sbjct: 305 LALTDKHEVYAWGDGSFGAIGTG 327
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 76/260 (29%), Positives = 108/260 (41%), Gaps = 30/260 (11%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWA 114
CG ALA + +G+L +WGS + EGQ L E +P + T A V A A G
Sbjct: 175 ACGMKHALALTNNGELYSWGS-NSEGQLGLGVDIRSEV-KPKLINTLAGVPIAFIACGGY 232
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT-EQAPPSDKRAG 173
H ++++++G ++ WG FG G + L T A G
Sbjct: 233 HSIAISKSGAIFGWG----------KNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACG 282
Query: 174 EE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL- 227
EE V + G + P V G +T+++ G RHTL L
Sbjct: 283 EEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 342
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
G+V+ WG GG GQLG S + +PTP ++ A +G L +Q S + G
Sbjct: 343 PSQGRVYAWGLGGAGQLGNNS-TRSIPTPQVVHGPWVAPNGSSMMDLDKQFSSCTVGYV- 400
Query: 288 RSYVKEIACGGRH--SAVVT 305
VK I GG H + VVT
Sbjct: 401 ---VKHIFTGGDHCFATVVT 417
Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 31/120 (25%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------------E 263
KVA G HT+ +++ GQ++ WG EGQLGL S+ M +P ++ L +
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMK 179
Query: 264 HAASGKDRPLLVRQGSVNSSGKAG-----RSYVKE-------------IACGGRHSAVVT 305
HA + + L GS NS G+ G RS VK IACGG HS ++
Sbjct: 180 HALALTNNGELYSWGS-NSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAIS 238
Score = 45.1 bits (105), Expect = 0.044, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAH 115
CG +A +E G+L +WGS + EGQ L S E +P + +V+ A G H
Sbjct: 122 ACGAYHTIAVNEWGQLFSWGS-NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKH 180
Query: 116 CVSVTEAGEVYTWG 129
+++T GE+Y+WG
Sbjct: 181 ALALTNNGELYSWG 194
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 47/199 (23%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
GD+ + G ++A ++S +L WGS G + + K P ++ ++
Sbjct: 1668 GDNSPQILSAGYEHSIAITKSNELYIWGSG---GLCGIGTLKQQNAPVKIDFFNKSKILT 1724
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
A G H V+VT+ E Y+WG E G Q LP
Sbjct: 1725 AVCGGLHTVAVTKDWEAYSWGLTE----------------------GGQLGLPQST---- 1758
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+VK + GDE L+P + G++I +VA G H++ ++
Sbjct: 1759 -------IVKLCQ-----------GQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAMT 1800
Query: 229 DMGQVWGWGYGGEGQLGLG 247
G ++GWG GQLGLG
Sbjct: 1801 KDGTIYGWGQSNYGQLGLG 1819
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 72/267 (26%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQ--------SYLTSGKHGE----TPEPFPLPT 102
VCGG +A ++ + +WG + GQ L G+ E TP+ P
Sbjct: 1726 VCGGL--HTVAVTKDWEAYSWGLTEG-GQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLE 1782
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALP 161
+ + A G AH +++T+ G +Y WG ++G G F DS + L
Sbjct: 1783 GLQIAQVACGEAHSIAMTKDGTIYGWG----------QSNYGQLGLGFSGDSF--EPGLG 1830
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
E++ +V + ++ + + E KI+K+ G
Sbjct: 1831 MEKS---------KVYEPQEINGLKHE------------------------KISKIICGA 1857
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP---LLVRQG 278
TL +D G ++G G GQLGL + ++ + I LE GK +++
Sbjct: 1858 TFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQ----IASLEKVKKGKHNQTSDVILPTR 1913
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ G A + +IACG HS V+
Sbjct: 1914 VICFQGIA----IHQIACGESHSLAVS 1936
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 30/108 (27%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSD--MGQVWGWGYGGEGQLGLGS-RIKMVPTPHLI 259
P V G+ I ++A G H+L +S M +W WG GQLGLG +K+ P P
Sbjct: 1911 PTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQS 1970
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTD 306
C S ++ IACG HS A++ D
Sbjct: 1971 LC--------------------------SSQIQRIACGSMHSVALIGD 1992
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 27/132 (20%)
Query: 196 DEFFTLSPCLVTLNPGVKIT-------KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
D+ + +P + L P + I+ +V G HT++++ GQV+ WG GQLGLG
Sbjct: 1610 DQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGD 1669
Query: 249 RIKMVPTPHLIPC-LEHAASGKDRPLLVRQGSVNSSGKA--------------GRSYVKE 293
+P ++ EH+ + L GS G +S +
Sbjct: 1670 N-----SPQILSAGYEHSIAITKSNELYIWGSGGLCGIGTLKQQNAPVKIDFFNKSKILT 1724
Query: 294 IACGGRHSAVVT 305
CGG H+ VT
Sbjct: 1725 AVCGGLHTVAVT 1736
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 39/222 (17%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P P PL E +K + GW H ++E+GE++TWG + S ++ G Q +T
Sbjct: 1210 PMP-PLKNEKRAIKVSCGWDHVALISESGELFTWGKNQ---SGQLGHGL-DIGKIQ--TT 1262
Query: 155 GKQSALPTEQAPPSDKRAGEE---VVKRRKTSSAREESENPASGDEFFTLS---PCLVTL 208
K+ ++P G E V + + + G ++S P ++
Sbjct: 1263 PKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIED 1322
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP---HLIPCLEH 264
G KI +AAG HT++L G+++ +GYG +GQLG GS + K +PT + I ++H
Sbjct: 1323 ISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQH 1382
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G + +IACG HS + +D
Sbjct: 1383 ----------------------GGGKITQIACGFGHSVICSD 1402
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 31/248 (12%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGK 90
P+ ++ P+P + K CG SESG+L TWG + GQ L GK
Sbjct: 1202 PDPELMICPMPPLKNEKRAIKVSCG--WDHVALISESGELFTWGK-NQSGQLGHGLDIGK 1258
Query: 91 HGETPEPFPL-PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
TP+ ++ ++ G H + V VY+WG + FG G
Sbjct: 1259 IQTTPKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDK----------FGQLGHG 1308
Query: 150 QKDSTGKQSALPTE------QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS- 202
K + + + + QA + + K + S + F + S
Sbjct: 1309 TKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSI 1368
Query: 203 PCLVTLNP-------GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
P + LN G KIT++A G H++I SD G+V+ WG G +GQLG G+ + +
Sbjct: 1369 PTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGN-YESIAR 1427
Query: 256 PHLIPCLE 263
P LI L+
Sbjct: 1428 PRLIEALK 1435
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 24/94 (25%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ KVA GG HT+ L+ GQV+ +G G GQLGLGS+I P L+ L
Sbjct: 242 KVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEAL---------- 291
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ +K IACG H+AVV+D
Sbjct: 292 --------------SKRKIKHIACGESHTAVVSD 311
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 25/93 (26%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KIT VAAG HTL ++D +++ +G G EG LG G + P I LE KD
Sbjct: 88 KITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL-NMPTSIESLE----DKD-- 140
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
V IACGG HSA +T
Sbjct: 141 ------------------VNIIACGGYHSAAIT 155
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 88/253 (34%), Gaps = 87/253 (34%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
V CG + +E+G+L T+G+ ++ GQ + S K P + AAG
Sbjct: 37 VTDIACGDEHTVVVTENGRLFTFGN-NEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAG 95
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++VT++ ++Y++G GS G+
Sbjct: 96 RFHTLAVTDSNKLYSFGQ-------------GSEGAL----------------------- 119
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
GDE P + + +A GG H+ ++ G+
Sbjct: 120 --------------------GHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGE 159
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
++ WG EGQLGL + + P ++ G+S +
Sbjct: 160 LYIWGSNSEGQLGLKN--DTISYPTMLDL-------------------------GKSVI- 191
Query: 293 EIACGGRHSAVVT 305
+ACG H+AVVT
Sbjct: 192 SVACGYYHTAVVT 204
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
KDV CG + A +++G+L WGS + EGQ L K+ P L SV+ A
Sbjct: 139 KDVNIIACGGYHSAAITKNGELYIWGS-NSEGQLGL---KNDTISYPTMLDLGKSVISVA 194
Query: 111 AGWAHCVSVTEAGEVYTWGWRE 132
G+ H VT G++YT+G E
Sbjct: 195 CGYYHTAVVTADGKLYTFGETE 216
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G+ I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAA 179
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
G HT +++ G ++GWG+G G LGLG R ++VP
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP 215
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 61/263 (23%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG + G + +DS Q E P A
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQ-------NGQLGLGDT--EDSLVPQKIQAFEGIPIKMVAA 179
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
G E T++ E+ + N GD L P VT G K++ VA G R
Sbjct: 180 GAE-----HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
HT+ +S G ++ +G+ GQLG G HLIP A S
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPHKLEALS--------------- 274
Query: 283 SGKAGRSYVKEIACGGRHSAVVT 305
S++ +I+ G RH+ +T
Sbjct: 275 -----NSFISQISGGWRHTMALT 292
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 86/240 (35%), Gaps = 35/240 (14%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K IP ++ G A +E G L WG G L
Sbjct: 163 PQKIQAFEGIPIKMVAA---------GAEHTAAVTEDGDLYGWGWGR-YGNLGLGDRTDR 212
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE + A GW H +SV+ +G +YT+GW + +G G +
Sbjct: 213 LVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSK----------YGQLGHGDLE 262
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
+P + S+ + R T + + + G+ S
Sbjct: 263 ----DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS 318
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V K+ +V+ G RHTL +++ V+ WG G GQLG+G + P +I L
Sbjct: 319 PVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR-NFPKIIEAL 377
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 98/246 (39%), Gaps = 48/246 (19%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ P L G K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTIV-PKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T V + A G H +++ + GEVY WG+ C G
Sbjct: 111 TTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFF----- 199
GS ST Q P+ ++ + +R S A ++ + A D E +
Sbjct: 161 GS---GSTANQ---------PTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYN 208
Query: 200 ------------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L+PC V V + ++ G HTL L+D G ++ WG GQLG G
Sbjct: 209 GNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 248 SRIKMV 253
++ ++
Sbjct: 269 NKSNLL 274
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P + N +K +T+VA G H++ L+D G+V+ WGY GQ+G GS PTP +
Sbjct: 116 IAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQ-PTPRKV 174
Query: 260 P-CLE 263
CL
Sbjct: 175 TNCLH 179
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWG 258
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 33/218 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LATSE G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHVVLATSE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A ++ SG+ L +PC V G+++ + A G
Sbjct: 208 VNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYA 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 268 HTLVLTDEGQVYVWGANSYGQLGTGNKSNQPYPTPIIV 305
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG +
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYS 232
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V +AA G+AH + +T+ G+VY WG
Sbjct: 233 ---GNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWG 282
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEH 264
CL++
Sbjct: 199 TGCLQN 204
>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 671
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 97/241 (40%), Gaps = 21/241 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHC 116
G F+L G + +WG +Y T G P EA + V AAG H
Sbjct: 135 GTQFSLGLKTDGTVWSWGC-----NTYATLGLGDRVDRNTPQKVEALSNAVALAAGDDHT 189
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++T G V++WGW + GS +ST K+ + + + +
Sbjct: 190 LALTRDGSVWSWGW-----NYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQTYHTQA 244
Query: 177 VKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ R S + GD+ +P V + + AGG H+L ++ GQVW
Sbjct: 245 LTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALS--NVVAINAGGNHSLAVTRDGQVW 302
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---SGKDRPL-LVRQGSVNSSGKAGRSY 290
WG EGQLGLG P + L + +G D L L R GSV + GK GR
Sbjct: 303 AWGENSEGQLGLGDLWDR-DAPQKVEALSNVVAINAGGDHTLALTRDGSVWAWGKNGRGQ 361
Query: 291 V 291
+
Sbjct: 362 I 362
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A ++ G L TWG DD L G G+ P L ++VV A G H ++V+ G
Sbjct: 1 MAVTQGGALWTWGGNDD---GRLGIGATGDQNLPVQLSYLSNVVSLAGGEKHSLAVSGDG 57
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V++WG SAG +S S L AP +G++ T
Sbjct: 58 SVWSWG-------------SNSAGQLGVESLTPASVL----APVHALYSGDDFHLFYDTD 100
Query: 184 -SAREESENPASGDEFFT---LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ + D F T LS C G + +AAG + +L L G VW WG
Sbjct: 101 GDGTGDICDDCPYDPFKTAPGLSGC------GNAVPMLAAGTQFSLGLKTDGTVWSWGCN 154
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPL-LVRQGSV-----NSSGKAGRSY 290
LGLG R+ TP + L +A A+G D L L R GSV N +G+ G
Sbjct: 155 TYATLGLGDRVDR-NTPQKVEALSNAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGS 213
Query: 291 VKE 293
+ E
Sbjct: 214 IHE 216
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+P+K LS A G D LA + G + +WG + GQ L S
Sbjct: 168 NTPQKVEALSNAVALAAGDD-----------HTLALTRDGSVWSWG-WNYNGQLGLGS-I 214
Query: 91 HGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG- 147
H +T E P EA +V AA H ++T G V++WG + DFG G
Sbjct: 215 HEDTYESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWG----------SNDFGQLGM 264
Query: 148 --SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFFTLSPC 204
+D+ K AL A + V + + + E SE GD + +P
Sbjct: 265 GDQNDRDAPQKVEALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQ 324
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HLI 259
V + + AGG HTL L+ G VW WG G GQ+G G + P H+I
Sbjct: 325 KVEALS--NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGEGQSLYNEPVHVI 378
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 26/115 (22%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHLIPCLEH----AASGKD 270
+AAG HTL L+ G VW WG+ GQLGLGS TP + + + AA
Sbjct: 182 LAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQTYH 241
Query: 271 RPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVT 305
L R G+V N G+ G S V I GG HS VT
Sbjct: 242 TQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAINAGGNHSLAVT 296
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 94/238 (39%), Gaps = 32/238 (13%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
S SG+L T+G +D GQ L +H TP+ V + G H V T +GEV
Sbjct: 504 VSVSGELYTFG-MNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEV 562
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---------KRAGEEV 176
+T G D G G KQ +PT+ P++ A
Sbjct: 563 FTCG----------KNDHGQLGL----GHNKQVKVPTQVVLPNELVCFVACGYYHATAIT 608
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
S R + G + P +T++ ++ A G HTL++SD GQV+ +
Sbjct: 609 STGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVF 668
Query: 237 GYGGEGQLG--------LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
G +GQLG L +K+ P ++ CL AA L+V + N G A
Sbjct: 669 GRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVERKRENDEGDA 726
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 105/272 (38%), Gaps = 43/272 (15%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TS 88
G E+ + SPIPA L G GC LA S G + +WG +D GQ L T+
Sbjct: 3201 GNFDERLIVPSPIPA-LSGIPITMVAASNGCEHMLAISHDGAVYSWG-YNDRGQLGLGTT 3258
Query: 89 GKHGETPEPF-PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
TP L + + AA + H V+ G++ T+G + +G
Sbjct: 3259 VSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMND-------------SG 3305
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-------- 199
D T Q P S ++ G T + ++ + + G +
Sbjct: 3306 QLGLDHTQHQHT-PQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHT 3364
Query: 200 --TLSPCLVTLNPG---------VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
T P LV + P K +V G HT+ + + G+V WG GQLG+GS
Sbjct: 3365 QNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGS 3424
Query: 249 R-----IKMVPTPHLIPCLEHAASGKDRPLLV 275
+ + VP P L ++ A+ G LL+
Sbjct: 3425 KEHKSIAQFVPLP-LTSRVKRASCGCYHTLLL 3455
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 33/128 (25%)
Query: 211 GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------ 262
G+ IT VAA G H L +S G V+ WGY GQLGLG+ + TP +I L
Sbjct: 3218 GIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFI 3277
Query: 263 -------EHAASGKDRPLLVRQGSVNSSGKAGRSYVKE-----------------IACGG 298
H+A + L+ G +N SG+ G + + +ACG
Sbjct: 3278 TFAAVSYHHSAVVSNNGDLLTFG-MNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGL 3336
Query: 299 RHSAVVTD 306
H+ + D
Sbjct: 3337 YHTVAIVD 3344
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 82/232 (35%), Gaps = 58/232 (25%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G E+ +L PI A + + GC +A +++G +WG D + G
Sbjct: 416 GNFDERVMLLRPIQALRSHRVKYINA-SNGCEHLIAITDTGLAYSWGYNDRGQLGHENVG 474
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
P+ E + AA + H V+ +GE+YT+G +C G
Sbjct: 475 TKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDC-------------GQL 521
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
D T QS +P LV
Sbjct: 522 GLDHTQHQS-------------------------------------------TPQLVKAL 538
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLIP 260
G ++ V+ G H ++ + G+V+ G GQLGLG ++ VPT ++P
Sbjct: 539 LGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPTQVVLP 590
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 28 LPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQ 83
L T K P+L IP R D+ CG+ + E GK++TWG +D GQ
Sbjct: 3361 LSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGR-NDYGQ 3419
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ S +H + PLP + V +A+ G H + + G +G
Sbjct: 3420 LGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFG 3465
>gi|399216069|emb|CCF72757.1| unnamed protein product [Babesia microti strain RI]
Length = 1470
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 31/247 (12%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVT 120
LA S + TWGS ++GE EP +P + S ++ + G AH +
Sbjct: 49 GLAVSRDKGVYTWGSIWHNAMGL--GIENGEVKEPIKIPFFEDKSALQVSCGDAHSAVLV 106
Query: 121 EA-----GEVYTWG--------WRECVPSAKVTRDFGSAGSFQKDSTGKQSA-----LPT 162
G VYT+G + +C S + D +A F+ D K + +
Sbjct: 107 ATDSNYLGTVYTFGLGNNGRLGYPKCGQS--IDNDNDNANVFRDDQNEKSNGTIHTDIMD 164
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAR----EESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
++ S K +++ RK S + S + + +F+ P V L +K+ V+
Sbjct: 165 DKNNISSKNNPKKIQLNRKVSLEEVLQCDTSASHLNNQSWFSTRPFRVKLK--LKVRLVS 222
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTPHLIPCLEHAASGKDRPLLVRQ 277
G HTL++ + +W WG G G LGLGS + PT + + H ++G L V
Sbjct: 223 CGSAHTLVICEDSSLWSWGRGNFGVLGLGSNCDVFEPTKVALDNVTHVSAGDRHSLAVSN 282
Query: 278 GSVNSSG 284
S+ S G
Sbjct: 283 NSLYSWG 289
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P V L+ +T V+AG RH+L +S+ ++ WGYG G+LGL K V P L+
Sbjct: 257 FEPTKVALD---NVTHVSAGDRHSLAVSN-NSLYSWGYGANGRLGL-YHSKNVYDPSLV- 310
Query: 261 CLEHAASGKDRPLLVRQGSVNSS--GKAGRSYVKEIACGGR--HS-AVVTDMSYP 310
G D+ L V G +S+ G + GGR HS ++ D++YP
Sbjct: 311 ----NGKGFDQVLYVSAGQSHSACINCRGEIFTWGSGQGGRLGHSWSLNGDLNYP 361
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 29/200 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L +E G+L WG G S L +G + P + VV+ A G H +++
Sbjct: 87 VLMATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T++GEVY WG+ C G GS ST Q + +K A V +
Sbjct: 144 TDSGEVYAWGYNNC----------GQVGS---GSTANQPTPRRVSSCLQNKVAVGIVCGQ 190
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + + E G+ L+PC + G+ + ++ G H L LSD
Sbjct: 191 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSD 250
Query: 230 MGQVWGWGYGGEGQLGLGSR 249
G ++ WG GQLG G++
Sbjct: 251 EGVLYAWGSNTYGQLGTGNK 270
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P LV+ N K+ +VA G H++ L+D G+V+ WGY GQ+G GS PTP +
Sbjct: 116 VAPVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLEHAAS 267
CL++ +
Sbjct: 175 SSCLQNKVA 183
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K G CG +LA ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWG-Y 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AHC+++++ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWG 258
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KI ++ G G H L+ ++ G+++ WG+ G QLG G+ +
Sbjct: 56 TGDSQSTIVPKKLDFLNGRKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
V P+LV +N V E+ACG HS +TD
Sbjct: 116 VA-----------------PVLVSANMLNKK-------VVEVACGSHHSMALTD 145
>gi|332238752|ref|XP_003268565.1| PREDICTED: RCC1 domain-containing protein 1 [Nomascus leucogenys]
Length = 376
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGRVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G A G VK +CG RH+AVV
Sbjct: 257 AREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPLGSDAVK-ASCGSRHTAVV 315
Query: 305 T 305
T
Sbjct: 316 T 316
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L G+V+ WG G GQLG G+ ++ P L+
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGRVFSWGGGRHGQLGHGT-LEAELEPRLLEA 206
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L QG V + E+A GG HS V++
Sbjct: 207 L--------------QGLV----------MAEVAAGGWHSVCVSE 227
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 82 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 184 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 241 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 281
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 235 VQRVACGYAHTLVLTD 250
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 258
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 144
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVI 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC + G+++ +VA
Sbjct: 208 VTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQ---PTPCRIAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K + CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 106/269 (39%), Gaps = 52/269 (19%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + V+++G GT +S I+ LCG K + G L +
Sbjct: 32 NEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCG-KKIKSLSYGSGPHVLLS 90
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
+E G + WG G S L +G + P + T V++ A G H +++ G
Sbjct: 91 TEDGMVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EVY WG+ C G GS ST Q P+ ++ + +R S
Sbjct: 148 EVYAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTNCLHIKRVVS 185
Query: 184 SAREESENPASGD--EFF-----------------TLSPCLVTLNPGVKITKVAAGGRHT 224
A ++ + A D E + L+PC V V + ++ G HT
Sbjct: 186 IACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHT 245
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
L L+D G ++ WG GQLG G++ ++
Sbjct: 246 LALTDEGLLYAWGANTYGQLGTGNKSNLL 274
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
++P V N +K + +VA G H++ L+ G+V+ WGY GQ+G GS PTP
Sbjct: 116 IAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQ-PTP 171
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 96/265 (36%), Gaps = 83/265 (31%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
PIP L G GG +LA + +G ++ WG + GQ + + TP L
Sbjct: 87 PIPVGLPKGTEVTAAAGGDA-HSLAVTSAGTVLAWGR-NAVGQLGDGTTINRSTPVDVRL 144
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V AAG+ H +++T AG V+ WG +STG+
Sbjct: 145 PPGTTVTAVAAGFNHSLALTSAGTVFAWG---------------------DNSTGQL--- 180
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
G+ R T P V+ G IT VAAG
Sbjct: 181 ------------GDGTRTNRST--------------------PVAVSFPSGTVITAVAAG 208
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
G H+L L+ G V+ WG GQLG G+R + P++V
Sbjct: 209 GMHSLALTSAGTVFAWGDNSTGQLGDGTRTN-----------------RSTPVVV----- 246
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVT 305
G + V IA GG HS VT
Sbjct: 247 ---GLPVGTIVTAIAGGGSHSLAVT 268
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 89/223 (39%), Gaps = 17/223 (7%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ +S +P+ RL G + V G +LA + +G + WG + GQ +
Sbjct: 131 GTTINRS---TPVDVRLPPGTTVTAVAAG-FNHSLALTSAGTVFAWGD-NSTGQLGDGTR 185
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ TP P+ + AAG H +++T AG V+ WG T G G+
Sbjct: 186 TNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNS-------TGQLGD-GTR 237
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN----PASGDEFFTLSPCL 205
ST LP + G + +AR N G +
Sbjct: 238 TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVH 297
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
V L PG +T VA G H+L L+ +G V WG GQLG G+
Sbjct: 298 VRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGT 340
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 92/260 (35%), Gaps = 22/260 (8%)
Query: 11 NEKMEECKETVVYMWG------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
N + V+ WG GT +S +P+ G V GG +L
Sbjct: 158 NHSLALTSAGTVFAWGDNSTGQLGDGTRTNRS---TPVAVSFPSGTVITAVAAGGM-HSL 213
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + +G + WG + GQ + + TP LP V A G +H ++VT AG
Sbjct: 214 ALTSAGTVFAWGD-NSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGN 272
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
WG G + +D++ P + +
Sbjct: 273 ARAWG-------NNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTV 325
Query: 185 AREESEN---PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S N G +P V+L PGV IT VAAG L L+ G V WG
Sbjct: 326 LSWGSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIV 385
Query: 242 GQLGLG-SRIKMVPTPHLIP 260
GQLG G + ++ P +P
Sbjct: 386 GQLGDGTTTVRRTPVAASLP 405
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 92 GETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
G+ PF L + VV + GW HC ++TE G VYTWG GS
Sbjct: 862 GKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRN------------GSGELGH 909
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFF 199
D +G P +Q + +EVV + + AR ES + GD
Sbjct: 910 GDKSGVPQLHP-KQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP-H 257
P + + +T++AAG HT+++ G+V +G G GQLG G R + VPT
Sbjct: 969 HWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQ 1028
Query: 258 LIPCLEHAASGK-DRPLLVRQGSVNS-----SGKAGRS-------------------YVK 292
+P + AA G LL G V + SG+ G + ++
Sbjct: 1029 AMPSIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIR 1088
Query: 293 EIACGGRHSAVVTDM 307
IACG H+ +TD+
Sbjct: 1089 FIACGSFHTIAITDL 1103
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 93/233 (39%), Gaps = 32/233 (13%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P +L S G C AL T E+G++ T GSA GQ L + + P
Sbjct: 1023 VPTKLQAMPSIVQAACGYCHTALLT-EAGEVYTCGSAMS-GQ--LGHADNLQNDRLAPKM 1078
Query: 102 TEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-------SFQ 150
E + A G H +++T+ VYTWG + S R A S
Sbjct: 1079 VEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIV 1138
Query: 151 KDSTGKQSALPT-EQAPPSDKRAGEEVVKRRKTSSA------REESENPASGDEFFTLSP 203
K GK+ +L + A EV T S R + ASG T +P
Sbjct: 1139 KGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGT---TEAP 1195
Query: 204 CLVTLNPGVK-------ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
LV+ P + + AAG TL++++ G ++ WG G GQLGLG +
Sbjct: 1196 LLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQ 1248
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 115 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 170
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 171 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 216
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 217 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 273
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 274 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 314
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 149 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 207
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 208 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 267
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 268 VQRVACGYAHTLVLTD 283
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 240
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 241 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 291
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 90 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 144
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 145 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 177
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 22/200 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++ S+SG + WGS + GQ L+ K P + V AAG AH +
Sbjct: 215 GANHSMVLSKSGVIFVWGS-NRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAA 273
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD-KRAGEEVV 177
+T G V+T+GW SF + + S TE P S R ++
Sbjct: 274 LTAHGGVFTFGW-----------------SFYESHEVRISLRGTESNPQSALARKLFSLI 316
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGW 236
+R + G + L+P + G IT++A G HT+ + +G+V+ +
Sbjct: 317 EREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTF 376
Query: 237 GYGGEGQLGLGSRIKMVPTP 256
G GG GQ LGS + MV TP
Sbjct: 377 GLGGNGQ--LGSSVSMVSTP 394
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 101/282 (35%), Gaps = 100/282 (35%)
Query: 59 GCGFALATSESGKLITWGSADDE--GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G L + G++++ GS D + GQ T+ PEP +V+ G H
Sbjct: 59 GAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT-----KPEPVTALQCLRIVQVCCGQQHS 113
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++TEAG+VY W GS K G GE
Sbjct: 114 MALTEAGQVYMW------------------GSNSKGQLGN----------------GEGQ 139
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQVWG 235
R LSP V TL P + ++A G H L L + G ++
Sbjct: 140 ESR---------------------LSPRFVKTLAP-FTVVQIACGSNHCLALLNNGALYA 177
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPC---------LEHAASGKDRPLLVRQGSV------ 280
WG G GQLG+G+ V P +P L A G + +++ + V
Sbjct: 178 WGDNGNGQLGIGT----VGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGS 233
Query: 281 NSSGKAGRS-----------------YVKEIACGGRHSAVVT 305
N G+ G S +VK IA GG HSA +T
Sbjct: 234 NRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALT 275
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 86/334 (25%), Positives = 131/334 (39%), Gaps = 88/334 (26%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S AS +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALASDGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV-----NSSG 284
GQLGL +K++ T + I C EH A +L + G V S G
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGAGSYG 272
Query: 285 KAGR-----------------SYVKEIACGGRHS 301
+ G S V +IACG +H+
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 108/276 (39%), Gaps = 54/276 (19%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
++P P R+ + G ++A + +WG +D GQ + +P
Sbjct: 10 VTPPPRRVL-------IISAGASHSVALLSGDIVCSWGRGED-GQLGHGDAEDRLSPTQL 61
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ +V G H V+ +E+ EVY+WGW DFG G +S+
Sbjct: 62 SALDDHQIVSVTCGADHTVAYSESRMEVYSWGWG----------DFGRLG--HGNSSDLF 109
Query: 158 SALPTE--------QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
+ LP + Q D ++ S R ++ GD +L P +
Sbjct: 110 TPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 169
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
G++I VAAG HT +++ G ++GWG+G G LGLG R L+P E S
Sbjct: 170 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR-----NDRLVP--ERVTS-- 220
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
AG + +ACG RH+ V+
Sbjct: 221 ----------------AGGEKMSMVACGWRHTISVS 240
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 83/221 (37%), Gaps = 37/221 (16%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 186 AVTEDGDLYGWGWGR-YGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR----- 179
+YT+GW + +G G L P + G V+ +
Sbjct: 245 LYTYGWSK----------YGQLG---------HGDLEDHLVPHKLEALGNSVISQISGGW 285
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
R T + + + G+ SP V + K+ +V+ G RHTL +++
Sbjct: 286 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTE 345
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-HAASGK 269
V+ WG G GQLG+G + P +I L ASG+
Sbjct: 346 RNNVFAWGRGTNGQLGIGESLDR-NFPKIIEALSVDGASGQ 385
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 68/237 (28%)
Query: 91 HGETPEPF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
HG + + F PLP +A + + A G +HC++VT GEV +WG
Sbjct: 102 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWG---------------- 145
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE--------------- 190
++ G+ TE + K E ++ + ++ E +
Sbjct: 146 -----RNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGR 200
Query: 191 --NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
N GD L P VT G K++ VA G RHT+ +S G ++ +G+ GQLG G
Sbjct: 201 YGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD 260
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ PH + L G S + +I+ G RH+ +T
Sbjct: 261 -LEDHLVPHKLEAL------------------------GNSVISQISGGWRHTMALT 292
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P +P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
>gi|290980486|ref|XP_002672963.1| predicted protein [Naegleria gruberi]
gi|284086543|gb|EFC40219.1| predicted protein [Naegleria gruberi]
Length = 591
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 70/252 (27%)
Query: 95 PEPFPLPTEASVV------KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
P + L E +V+ K + HC+ +T G VY+ G E FG G
Sbjct: 120 PFGYSLKVEDTVIPPYKITKIETRFKHCLILTRDGFVYSIGDAE----------FGKLGD 169
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE-------------------ES 189
+DSTG ++ + D+ V K E E+
Sbjct: 170 GYEDSTGTKAPFVRKPVLIMDRAIDIAVGKHHSAIVTDEGNVHTFGYGKYGQLGHSNFEN 229
Query: 190 EN-PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-- 246
EN P ++F +N ++ITKVA G HT+ L+D G V+G+G G +GQLG+
Sbjct: 230 ENVPRVVEDF---------INRDIRITKVACGDHHTICLTDTGLVYGFGNGSQGQLGVLG 280
Query: 247 ------------GSRIKMVPTPHLIPCLEHAASGKD--RPLLVRQGSVNSSGKAGRSYVK 292
+++K VP P L+ + + R L ++ V G
Sbjct: 281 FLDIKGDLSQTEKAQLKYVPRPRLVEIMRETQQETEEYRRLRTKKTFVEIDG-------- 332
Query: 293 EIACGGRHSAVV 304
I CG +SA +
Sbjct: 333 -IMCGSDYSAFL 343
>gi|403355741|gb|EJY77458.1| hypothetical protein OXYTRI_00911 [Oxytricha trifallax]
Length = 922
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 111/300 (37%), Gaps = 76/300 (25%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS---ADDEGQSYLTSGKHGETP 95
P P + G +++ CG + A +G L TWG + ++GQ E P
Sbjct: 304 PQPVQALYG---REIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYP 360
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGSAGSFQKD 152
E + +VK A G H +++T E+Y +G + EC G F
Sbjct: 361 EKVKYLSSKRIVKVACGGFHTLALTSENELYGFGSGNYGEC-----------GNGEFMDT 409
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S K P + K+ T E DE F L + L
Sbjct: 410 SKPKLIKFPNDHLD----------TKKNVTDDLEEYGH-----DEEFVLE---MYLKEQP 451
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I AAGGRH+LI+++ G+++ +GYG GQLG +++ C AA
Sbjct: 452 QILDFAAGGRHSLIITNKGRLYSFGYGTNGQLG-----------NVVQC---AAGWNHSM 497
Query: 273 LLVRQGSVNSSG----------------------KAGRSYVKEIACGGRHSAVVTDMSYP 310
+L +G V S G G + +I GG HS VV D P
Sbjct: 498 ILTERGDVFSCGYGGHGQLGHGDKDSRTQFTFVQSLGNKNISKIFAGGSHSWVVLDSVVP 557
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-------------------- 154
H ++++ +G +Y+WG E FG G +S
Sbjct: 202 HSMALSMSGNIYSWGKNE----------FGQLGLGHTESKDYPSLIEALDNQEVEFLACG 251
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G SAL T+ AG K + ++E L PCLV G ++
Sbjct: 252 GSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRV 297
Query: 215 TKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
T++A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLP 341
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ V+ +ACGG HSA++T
Sbjct: 227 ----HTES-KDYPSLIE--------ALDNQEVEFLACGGSHSALLT 259
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 65/221 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ VV A G C++V + GEVY WG + G S+G
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-------------YNGNGQLGLGSSGN 249
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q PT PC V G+++ +
Sbjct: 250 Q---PT----------------------------------------PCRVAALQGIRVQR 266
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 267 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 145 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 264 VQRVACGYAHTLVLTD 279
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N S K V E+ACG HS V+T
Sbjct: 141 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLT 173
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 107/279 (38%), Gaps = 50/279 (17%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 35 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCG-KKIKSLSYGSGPH 93
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H V++
Sbjct: 94 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 150
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P+ ++ + +
Sbjct: 151 AADGEVFAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTNCLHIK 188
Query: 180 RKTSSAREESENPAS-------------------GDEFFTLSPCLVTLNPGVKITKVAAG 220
R A ++ + A G+ L+P V V + ++ G
Sbjct: 189 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCG 248
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
HTL L+D G ++ WG GQLG G++ ++ H++
Sbjct: 249 YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIM 287
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 120/313 (38%), Gaps = 59/313 (18%)
Query: 39 LSPIPARLC----GGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGE 93
L PIP RLC S G CG F + GKL WG D L G+
Sbjct: 73 LCPIPGRLCLPSVENASGLTEVGISCGLFHSSLVVDGKLWIWGKGDG---GRLGFGQEYP 129
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTR 141
P P S+ A G H V+++ G+V+TWG+ RE +P ++
Sbjct: 130 AFLPTLNPNLDSIRSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLP--RMVE 187
Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
+A + G +A TE +GE R R +E L
Sbjct: 188 GSWNAKIRHIATAGTHTAAITE--------SGELYTWGRDQGDGRLGLGPNCGPNEGGGL 239
Query: 202 S-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI---KMVPTPH 257
S P V P V + V+ GG T++L+ GQ+W WG +LG G ++ K P P
Sbjct: 240 SIPSKVKALP-VPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPS 298
Query: 258 L--IPCLEHAASGKDRPLLVRQGSVNS-----SGKAGRS-----------------YVKE 293
L + ++ A+ G L G V S G+ G S +V
Sbjct: 299 LQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIY 358
Query: 294 IACGGRHSAVVTD 306
IACGG SA +TD
Sbjct: 359 IACGGSSSAAITD 371
>gi|63054858|ref|NP_291022.2| RCC1 domain-containing protein 1 [Homo sapiens]
gi|63054860|ref|NP_001017919.1| RCC1 domain-containing protein 1 [Homo sapiens]
gi|190360155|sp|A6NED2.1|RCCD1_HUMAN RecName: Full=RCC1 domain-containing protein 1
gi|119622535|gb|EAX02130.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
gi|119622537|gb|EAX02132.1| RCC1 domain containing 1, isoform CRA_a [Homo sapiens]
gi|187954499|gb|AAI40709.1| RCC1 domain containing 1 [Homo sapiens]
gi|187954599|gb|AAI40710.1| RCC1 domain containing 1 [Homo sapiens]
Length = 376
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 206
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L QG V + E+A GG HS V++
Sbjct: 207 L--------------QGLV----------MAEVAAGGWHSVCVSE 227
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLAE 251
Query: 261 CLEHAAS-----GKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGR 299
E A +D + R G A G VK +CG R
Sbjct: 252 DGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSR 310
Query: 300 HSAVVT 305
H+AVVT
Sbjct: 311 HTAVVT 316
>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+PIP L G + + G +LA + +G ++ WG + GQ + TP
Sbjct: 79 TPIPVSLPPGTTVTAIAAGDE-HSLALTSTGTVLAWGR-NRFGQLGDETNTSRSTPVTVS 136
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF-GSAGSFQKDSTGKQS 158
LP +V AAG +H +++T G WG R+F G G + + K
Sbjct: 137 LPPGTTVTAIAAGRSHSLAITSTGSALAWG-----------RNFSGQLGDGTTNDSNKPV 185
Query: 159 ALPTEQAPPSDK----RAGE---EVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLN 209
A+ PP AG+ V T+ A R + G + +P V++
Sbjct: 186 AV---NLPPGTTVTAIAAGDGHSLAVTSAGTALAWGRNFAGQLGDGTTNDSTTPVTVSVA 242
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
PG +T +AAG H+L ++ G GWG G GQLG G
Sbjct: 243 PGTTVTDIAAGRVHSLAITSAGTALGWGRNGSGQLGDG 280
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 75/190 (39%), Gaps = 25/190 (13%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
S ++ WG + GQ +G +TP P LP +V AAG H +++T G V W
Sbjct: 55 SDTVLAWGD-NLFGQLGDGTGADSDTPIPVSLPPGTTVTAIAAGDEHSLALTSTGTVLAW 113
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP-TEQAPPSDK-------RAGEEVVKRR 180
G FG G D T + P T PP R+ +
Sbjct: 114 GRNR----------FGQLG----DETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAITST 159
Query: 181 KTSSA--REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
++ A R S G + P V L PG +T +AAG H+L ++ G WG
Sbjct: 160 GSALAWGRNFSGQLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVTSAGTALAWGR 219
Query: 239 GGEGQLGLGS 248
GQLG G+
Sbjct: 220 NFAGQLGDGT 229
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 84/216 (38%), Gaps = 16/216 (7%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+ L G + + G G +LA + +G + WG + GQ + TP +
Sbjct: 184 PVAVNLPPGTTVTAIAAGD-GHSLAVTSAGTALAWGR-NFAGQLGDGTTNDSTTPVTVSV 241
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+V AAG H +++T AG WG S ++ + + + +
Sbjct: 242 APGTTVTDIAAGRVHSLAITSAGTALGWGRNG---SGQLGDGTTNDSTTPTTVSPPTGTV 298
Query: 161 PTEQAPPSDKRAGEE---VVKRRKTSSAREESENPASGDEFFTLSPCLVT--LNPGVKIT 215
T A AGE+ V T+ A ++ GD T S VT L P IT
Sbjct: 299 FTTVA------AGEDHSLAVTSAGTALAAGDNLYGQLGDGTNTSSNTFVTVSLPPSTTIT 352
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+A G H L ++ G WG +GQLG G+
Sbjct: 353 AIAVGRFHNLGVTATGAALAWGINIDGQLGDGTTTN 388
>gi|410300174|gb|JAA28687.1| RCC1 domain containing 1 [Pan troglodytes]
Length = 378
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 168 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 224
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 225 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 268
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 269 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 325
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 326 WGWGKYGQLG 335
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 150 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 208
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L QG V + E+A GG HS V++
Sbjct: 209 L--------------QGLV----------MAEVAAGGWHSVCVSE 229
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L
Sbjct: 201 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLAE 253
Query: 261 CLEHAAS-----GKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGR 299
E A +D + R G A G VK +CG R
Sbjct: 254 DGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSR 312
Query: 300 HSAVVT 305
H+AVVT
Sbjct: 313 HTAVVT 318
>gi|426380328|ref|XP_004056825.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Gorilla
gorilla gorilla]
gi|426380330|ref|XP_004056826.1| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 376
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 42/235 (17%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
L SG+ + P PL + + +A W++ VT G + G + + + S
Sbjct: 21 LGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRLELSG-SASGAAVRCKDAWAS 79
Query: 146 AGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL--- 201
G G + AL AP S R GE + + A E ++P + +L
Sbjct: 80 EGLLAVLRAGPGREALLQVWAPESALR-GEPLWAQNVVPEA-EGEDDPVGEAQAGSLPLL 137
Query: 202 ----------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++
Sbjct: 138 PCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LE 196
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P L+ L QG V + E+A GG HS V++
Sbjct: 197 AELEPRLLEAL--------------QGLV----------MAEVAAGGWHSVCVSE 227
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLAE 251
Query: 261 CLEHAAS-----GKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGR 299
E A +D + R G A G VK +CG R
Sbjct: 252 DGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSR 310
Query: 300 HSAVVT 305
H+AVVT
Sbjct: 311 HTAVVT 316
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 47/225 (20%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHVVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ +++G+ + PT P + G
Sbjct: 162 YHSLVLTSDGEVFAWGY---------------------NNSGQVGSGPTANQPIPRRVTG 200
Query: 174 ---EEVVKR----RKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPGVKIT 215
+VV + S A ++ +G+ L +PC V G+++
Sbjct: 201 CLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQ 260
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
+VA G HTL+L+D GQV+ WG GQLG G++ PTP ++
Sbjct: 261 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLPGTSPEKSPILS-PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY P + PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWG-Y 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L SG + TP V + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G G P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 65/221 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ VV A G C++V + GEVY WG + G S+G
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-------------YNGNGQLGLGSSGN 244
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q PT PC V G+++ +
Sbjct: 245 Q---PT----------------------------------------PCRVAALQGIRVQR 261
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 65/221 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ VV A G C++V + GEVY WG + G S+G
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-------------YNGNGQLGLGSSGN 244
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q PT PC V G+++ +
Sbjct: 245 Q---PT----------------------------------------PCRVAALQGIRVQR 261
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|114659014|ref|XP_523159.2| PREDICTED: RCC1 domain-containing protein 1 isoform 2 [Pan
troglodytes]
gi|332844685|ref|XP_003314905.1| PREDICTED: RCC1 domain-containing protein 1 isoform 1 [Pan
troglodytes]
gi|410207948|gb|JAA01193.1| RCC1 domain containing 1 [Pan troglodytes]
gi|410329461|gb|JAA33677.1| RCC1 domain containing 1 [Pan troglodytes]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 170 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 226
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V V+E G++Y WGW E A TR+ G ++ +++ E G +V
Sbjct: 227 VCVSETGDIYIWGWNESGQLALPTRNLAEDG----ETVAREATELNED--------GSQV 274
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++T A + + P + F P L+ L G K + G RHT +++ G+++ W
Sbjct: 275 ---KRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTW 328
Query: 237 GYGGEGQLG 245
G+G GQLG
Sbjct: 329 GWGKYGQLG 337
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 93/248 (37%), Gaps = 64/248 (25%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
L SG+ + P PL + + +A W++ VT G + E SA G+
Sbjct: 21 LGSGRGRQVHSPSPLRAGVDICRVSASWSYTAFVTRGGRL------ELSGSAS-----GA 69
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-------------REESENP 192
AG KD+ + L +A P E +++ SA E E+
Sbjct: 70 AGRC-KDAWASEGLLAVLRAGPGPGPGPEALLQVWAAESALRGEPLWAQNVVPEAEGEDD 128
Query: 193 ASGDE---FFTLSPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+G+ L PC L P ++ ++ G H L+L GQV+ WG
Sbjct: 129 PAGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGG 188
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
G GQLG G+ ++ P L+ L QG V + E+A GG
Sbjct: 189 GRHGQLGHGT-LEAELEPRLLEAL--------------QGLV----------MAEVAAGG 223
Query: 299 RHSAVVTD 306
HS V++
Sbjct: 224 WHSVCVSE 231
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L
Sbjct: 203 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLAE 255
Query: 261 CLEHAAS-----GKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGR 299
E A +D + R G A G VK +CG R
Sbjct: 256 DGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSR 314
Query: 300 HSAVVT 305
H+AVVT
Sbjct: 315 HTAVVT 320
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 88 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALT 144
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
++GEVY WG+ C G GS ST Q P + R +V +
Sbjct: 145 DSGEVYAWGYNNC----------GQVGS---GSTANQPT-PRRVSSCLQNRVAVSIVCGQ 190
Query: 181 KTSSAREESE-----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+S A ++ G+ L+PC + G+ + +V +G H+L L+D
Sbjct: 191 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTD 250
Query: 230 MGQVWGWGYGGEGQLGLGSR 249
G ++ WG GQLG G++
Sbjct: 251 EGLLYAWGANTYGQLGTGNK 270
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-PCLEH 264
K+T+VA G H++ L+D G+V+ WGY GQ+G GS PTP + CL++
Sbjct: 129 KVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ-PTPRRVSSCLQN 180
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P V + G K+ ++ G G H L+ ++ G+++ WG+ G QLG G+ +
Sbjct: 56 TGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
V P+LV +N V E+ACG HS +TD
Sbjct: 116 VA-----------------PVLVSATLLNRK-------VTEVACGSHHSMALTD 145
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 103 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALT 159
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
++GEVY WG+ C G GS ST Q P + R +V +
Sbjct: 160 DSGEVYAWGYNNC----------GQVGS---GSTANQPT-PRRVSSCLQNRVAVSIVCGQ 205
Query: 181 KTSSAREESE-----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+S A ++ G+ L+PC + G+ + ++ +G H+L L+D
Sbjct: 206 TSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTD 265
Query: 230 MGQVWGWGYGGEGQLGLGSR 249
G ++ WG GQLG G++
Sbjct: 266 EGLLYAWGANTYGQLGTGNK 285
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P LV+ N K+T+VA G H++ L+D G+V+ WGY GQ+G GS PTP +
Sbjct: 131 VAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ-PTPRRV 189
Query: 260 -PCLEH 264
CL++
Sbjct: 190 SSCLQN 195
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD ++ P V + G K+ ++ G G H L+ ++ G+++ WG+ G QLG G+ +
Sbjct: 71 TGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQG 130
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
V P+LV +N V E+ACG HS +TD
Sbjct: 131 VA-----------------PVLVSANLLNKK-------VTEVACGSHHSMALTD 160
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 144 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 200
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----------------- 154
H ++++ +G VY+WG E FG G + KDS
Sbjct: 201 HSMALSMSGNVYSWGKNE----------FGQLGLGHTESKDSPSLIEALDNQKVEFLACG 250
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G SAL T+ AG K + ++E L PCLV G ++
Sbjct: 251 GSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRV 296
Query: 215 TKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
T++A G HTL +SD+G+V+ +G G +GQLG G + +++P P
Sbjct: 297 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLP 340
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G V+ WG GQLGLG
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLG------------ 225
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ V+ +ACGG HSA++T
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLT 258
>gi|403352385|gb|EJY75705.1| hypothetical protein OXYTRI_02905 [Oxytricha trifallax]
Length = 923
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 111/300 (37%), Gaps = 76/300 (25%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS---ADDEGQSYLTSGKHGETP 95
P P + G +++ CG + A +G L TWG + ++GQ E P
Sbjct: 304 PQPVQALYG---REIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYP 360
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGSAGSFQKD 152
E + ++K A G H +++T E+Y +G + EC G F
Sbjct: 361 EKVKYLSSKRIIKVACGGFHTLALTSENELYGFGSGNYGEC-----------GNGEFMDT 409
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S K P + K+ T E DE F L + L
Sbjct: 410 SKPKLIKFPNDHLD----------TKKNVTDDLEEYGH-----DEEFVLE---MYLKEQP 451
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I AAGGRH+LI+++ G+++ +GYG GQLG +++ C AA
Sbjct: 452 QILDFAAGGRHSLIITNKGRLYSFGYGTNGQLG-----------NVVQC---AAGWNHSM 497
Query: 273 LLVRQGSVNSSG----------------------KAGRSYVKEIACGGRHSAVVTDMSYP 310
+L +G V S G G + +I GG HS VV D P
Sbjct: 498 ILTERGDVFSCGYGGHGQLGHGDKESRTQFTFVQSLGNKNISKIFAGGSHSWVVLDSVVP 557
>gi|119622536|gb|EAX02131.1| RCC1 domain containing 1, isoform CRA_b [Homo sapiens]
Length = 390
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 180 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 236
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 237 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 280
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 281 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 337
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 338 WGWGKYGQLG 347
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 162 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 220
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L QG V + E+A GG HS V++
Sbjct: 221 L--------------QGLV----------MAEVAAGGWHSVCVSE 241
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR----------- 249
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 213 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAR 272
Query: 250 --IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ + A G P + Q S + +CG RH+AVVT
Sbjct: 273 EATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVT 330
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 86/334 (25%), Positives = 131/334 (39%), Gaps = 88/334 (26%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHVREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S AS +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALASDGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV-----NSSG 284
GQLGL +K++ T + I C EH A +L + G V S G
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGAGSYG 272
Query: 285 KAGR-----------------SYVKEIACGGRHS 301
+ G S V +IACG +H+
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 100/252 (39%), Gaps = 48/252 (19%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTIVPKKLEALCG-KKIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T V++ A G H +++ GEVY WG+ C G
Sbjct: 111 TTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFF----- 199
GS ST Q P+ ++ + +R S A ++ + A D E +
Sbjct: 161 GS---GSTANQ---------PTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYN 208
Query: 200 ------------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L+PC V V + ++ G HTL L+D G ++ WG GQLG G
Sbjct: 209 GNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 248 SRIKMVPTPHLI 259
++ ++ ++
Sbjct: 269 NKSNLLSPAQIM 280
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWG 258
>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
echinatior]
Length = 771
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 96/268 (35%), Gaps = 82/268 (30%)
Query: 40 SPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
SPI CG + + G ++A + G ++ WGS + EGQ L G +P
Sbjct: 179 SPILIYDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGS-NLEGQLGLPEIS-GLVYKPM 236
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+P V + +AG+ H V +TE+G +Y G E + G +F KQ
Sbjct: 237 KVPIPEPVKEISAGYYHSVFLTESGLIYICGESE-------SGKLGLNINFSTQVAPKQM 289
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
LP +P L VA
Sbjct: 290 QLP----------------------------------------APAL----------HVA 299
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
GG HT IL++ G ++ G GQLG+G + PTP L+P
Sbjct: 300 CGGHHTFILAENGNIYCSGSNASGQLGMGINVNETPTPKLLP------------------ 341
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G + +I CG HSA++T+
Sbjct: 342 ----RGALQDEKIIKIVCGESHSAILTE 365
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 82/201 (40%), Gaps = 53/201 (26%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F+ A S SG++ TWG + GQ L +G+ G P P+P V+ A G HC+++T
Sbjct: 238 FSAAVSLSGRVFTWGR-NKYGQ--LGNGEFGNAFLPQPVPGIEQAVQVACGDHHCIALTR 294
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
GEVYTWG S+G + S AL PS +
Sbjct: 295 WGEVYTWGLH-------------SSGQLGQGSNLGSEALNGCLCSPS------------R 329
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
S ++S I +V+AG RH+ +S Q+WG G E
Sbjct: 330 VDSLADQS------------------------IRQVSAGARHSFFVSPGEQLWGAGANDE 365
Query: 242 GQLGLGSRIKMVPTPHLIPCL 262
GQL L S + V P +P L
Sbjct: 366 GQLALQS-VPSVALPTRVPGL 385
>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 546
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 81/206 (39%), Gaps = 18/206 (8%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
++A + +G ++ WG + GQ +G TP LP + AAG H V++T A
Sbjct: 99 SVALTAAGTVLAWGD-NSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSA 157
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G V WG FG G + ST ALP + V
Sbjct: 158 GTVLAWGGNS----------FGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALT 207
Query: 181 KTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ NP G +P V L P +T VAAGG H++ L+ G V W
Sbjct: 208 SAGTVLAWGGNPFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAW 267
Query: 237 GYGGEGQLGLGSRI-KMVPTPHLIPC 261
G GQLG G+ + + PT +P
Sbjct: 268 GRNFFGQLGDGTVVDRSTPTVVSLPA 293
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 89/226 (39%), Gaps = 40/226 (17%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE----- 93
L+P+ L G + V G ++A + +G ++ WG G S+ G+ G+
Sbjct: 128 LTPVGVSLPAGVTASAVAAG-RDHSVALTSAGTVLAWG-----GNSF---GQLGDGTVVD 178
Query: 94 --TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
TP LP +V AAG H V++T AG V WG FG G
Sbjct: 179 RSTPVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGNP----------FGQLG---- 224
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF------TL---- 201
D T + P A P + + A G FF T+
Sbjct: 225 DGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRS 284
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+P +V+L GV + VAAG H+L L+ G V WG GQLG G
Sbjct: 285 TPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDG 330
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 26/201 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + +G ++ WG + GQ + TP LP +V AAG H V+
Sbjct: 199 GATHSVALTSAGTVLAWG-GNPFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVA 257
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T AG V WG R FG G D T + PT + P+ A
Sbjct: 258 LTSAGTVLAWG-RNF---------FGQLG----DGTVVDRSTPTVVSLPAGVTASAVAAG 303
Query: 179 RRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAA-GGRHTLIL 227
R + + A G+ F + +P VTL IT ++A +H++ +
Sbjct: 304 RIHSLALTTAGGVLAWGNNTFGQLGDGTTTTSSTPVSVTLPAATTITAISARDSQHSVAM 363
Query: 228 SDMGQVWGWGYGGEGQLGLGS 248
+ G WG GQLG G+
Sbjct: 364 TSAGAALSWGRNLRGQLGDGT 384
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + + G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 111/280 (39%), Gaps = 51/280 (18%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P+ ++ + +
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTSCLHTK 181
Query: 180 RKTSSAREESENPASGD--EFF-----------------TLSPCLVTLNPGVKITKVAAG 220
R S A ++ + A D E + L+P V V + ++ G
Sbjct: 182 RVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCG 241
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTPHLI 259
HTL L+D G ++ WG GQLG GS+ ++ PTP ++
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPIMV 281
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 36/240 (15%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 163 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 212
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE + + V+ A GW H +SV+ +GE+YT+GW + +G G
Sbjct: 213 CIPEKVSVDCDKMVL-VACGWRHTISVSSSGELYTYGWSK----------YGQLGH---- 257
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
K +P + SDK + R T + + GD S
Sbjct: 258 GDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCS 317
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V K+ +++ G RHT+ +++ V+ WG G GQLG+G I P +I L
Sbjct: 318 PVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDW-NYPKIIEAL 376
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTE 121
SG ++ +WG +D GQ HG+T + LPT+ S +V G H ++ +E
Sbjct: 32 SGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTQLSALDAQQIVSVVCGADHTLAYSE 84
Query: 122 AG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGE 174
+ EVY+WGW DFG G F L +Q D
Sbjct: 85 SKVEVYSWGWG----------DFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLA 134
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
++ S R ++ G +L P + GV I VAAG H++ +++ G+++
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELY 194
Query: 235 GWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSSGK 285
GWG+G G LGLG R + +P + C D+ +LV G SV+SSG+
Sbjct: 195 GWGWGRYGNLGLGDRNDRCIPEKVSVDC--------DKMVLVACGWRHTISVSSSGE 243
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 79/306 (25%), Positives = 119/306 (38%), Gaps = 75/306 (24%)
Query: 25 WGYL----PG--TSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
WGY PG +S + + P S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLL--EDGEVYTCG- 60
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 LNTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG-------- 110
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
GS G +T A+P K+ ++++ + S A+ +
Sbjct: 111 -----AGSDGQLGHTTTEDSVAIPR-----LIKKLNQQMI--LQVSCGNWHCMALAADGQ 158
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
GQLGL T PC H LL Q V I+CG
Sbjct: 219 NAGQLGLSDE-----TDRQSPC--HVK------LLRTQKVV------------YISCGEE 253
Query: 300 HSAVVT 305
H+AV+T
Sbjct: 254 HTAVLT 259
Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 5/189 (2%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D + T+ P + +++ + G HC
Sbjct: 91 ACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHC 150
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG + ++F S S Q+ +P Q +
Sbjct: 151 MALAADGQFFTWGQNRH-GQLGLGKEFPSQASPQR--VKSLEGIPLAQVAAGGAHSFALS 207
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ R + DE SPC V L K+ ++ G HT +L+ G V+ +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267
Query: 237 GYGGEGQLG 245
G G GQLG
Sbjct: 268 GAGSFGQLG 276
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 19 ETVVYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
T VY WG+ S + +P P R G K + CG LA + G++
Sbjct: 85 HTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIA---CGDSHCLAVTMEGQVQ 141
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+WG + GQ L + + P+ + AAG H +VTE GE+Y WGW
Sbjct: 142 SWGR-NQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGR- 199
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE------ 187
+G+ G + K +P + + P ++ R T S
Sbjct: 200 ---------YGNLGLGDR----KDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYT 246
Query: 188 ----ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ GD L P + G I++++ G RHT+ ++ G+++GWG+ GQ
Sbjct: 247 YGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQ 306
Query: 244 LGLGSRI 250
+G+G +
Sbjct: 307 VGVGDNV 313
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 23/212 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
G ++A + TWG +D GQ L G + P L T ++ G H
Sbjct: 22 GASHSVALLSGNVVCTWGRGED-GQ--LGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78
Query: 117 VSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
++ +E+ +VY+WGW DFG G F + L +Q D
Sbjct: 79 IAYSESHTDVYSWGWG----------DFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGD 128
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
++ + S R ++ G +L P + GV I VAAG HT +++
Sbjct: 129 SHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTE 188
Query: 230 MGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIP 260
G+++GWG+G G LGLG R ++VP +P
Sbjct: 189 DGELYGWGWGRYGNLGLGDRKDRLVPEKVSLP 220
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 82/221 (37%), Gaps = 26/221 (11%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G A +E G+L WG G L K
Sbjct: 162 PQKIQAFQGVPIKMVAA---------GAEHTAAVTEDGELYGWGWGR-YGNLGLGDRKDR 211
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE LP +V A GW H +SV+ +G +YT+GW + +G G
Sbjct: 212 LVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSK----------YGQLGHGDYA 261
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR------EESENPASGDEFFTLSPCLV 206
L Q + +G TS + + GD SP V
Sbjct: 262 DHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQV 321
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L K+ ++ G RHTL +++ V+ WG G GQLG G
Sbjct: 322 KLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNG 362
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 110/281 (39%), Gaps = 58/281 (20%)
Query: 39 LSP-IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TP 95
LSP I + L G + +CG A + S + + +WG D L G + TP
Sbjct: 55 LSPTILSTLEGLEIISVICGADHTIAYSESHT-DVYSWGWGD---FGRLGHGNSSDLFTP 110
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDST 154
+P + + A G +HC++VT G+V +WG G G +DS
Sbjct: 111 QPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWG----------RNQNGQLGLGTTEDSL 160
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPC 204
Q + P AG E T++ E+ E N GD L P
Sbjct: 161 VPQKIQAFQGVPIKMVAAGAE-----HTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPE 215
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
V+L G K+ VA G RHT+ +S G ++ +G+ GQLG G HLIP
Sbjct: 216 KVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDY-----ADHLIPHQLE 270
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
A G S++ +I+ G RH+ VT
Sbjct: 271 ALQG--------------------SFISQISGGWRHTMAVT 291
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 196
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 197 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 256
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 257 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 264 VQRVACGYAHTLVLTD 279
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 173
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + A ++ +G+ L +PC
Sbjct: 168 Q-PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCR 226
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 227 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 235 VQRVACGYAHTLVLTD 250
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 144
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 117 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 173
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 174 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 104/264 (39%), Gaps = 34/264 (12%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
D+ G A+ TS G L TWG ++ + + H TP+ + VV+ +A
Sbjct: 115 DIACGSRHTAIVTSR-GCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACG 173
Query: 114 AHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
H +T+AGEVYTWG R C S ++ Q G SA+ T
Sbjct: 174 FHTGCLTDAGEVYTWGEGKFGRLGHGAERNC-HSPRLVETLLGKRPVQISCGGFHSAVVT 232
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
GE GD+ + P LV GV +T++ G
Sbjct: 233 ADGKMYTFGGGEH--------------GQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWS 278
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPLLVR 276
H++ L+ +V+ WG G G+LG G K V TP L+ L A+ + LV
Sbjct: 279 HSVALTSSHEVYTWGNGDHGKLGHGCG-KKVSTPQLVEKLVGQKVVCVASYNEHTACLVE 337
Query: 277 QGSVNSSGKAGRSYVKEIACGGRH 300
SVN+S + + +I G H
Sbjct: 338 PHSVNASRRHAPGTMVQIGAGYLH 361
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 59/254 (23%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGE 124
+ G + TWG DD L G +G P + A + G H +V+ G
Sbjct: 23 THGGGVYTWGRGDD---GRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGN 79
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------DKRAGEE-- 175
++TWG G + K G +S T + S D G
Sbjct: 80 LFTWG----------------GGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHT 123
Query: 176 -VVKRRKTSSAREESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+V R + EN +G E +P L+ G ++ +++A G HT L+D G
Sbjct: 124 AIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAG 183
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+V+ WG G G+LG G+ + +P L+ L GK RP+
Sbjct: 184 EVYTWGEGKFGRLGHGAE-RNCHSPRLVETL----LGK-RPV------------------ 219
Query: 292 KEIACGGRHSAVVT 305
+I+CGG HSAVVT
Sbjct: 220 -QISCGGFHSAVVT 232
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 94/255 (36%), Gaps = 57/255 (22%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A S G L TWG G Y G E+ P ++ +VV A G H VT
Sbjct: 73 AVSSKGNLFTWG-----GGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVT 127
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G +YTWG +E G AG D+ G Q P S KR +
Sbjct: 128 SRGCLYTWGDKE----------NGVAG--HGDTEGHQYT-PKLLERLSGKRVVQLSACGF 174
Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
T + E G E SP LV G + +++ GG H+ +++
Sbjct: 175 HTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTAD 234
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G+++ +G G GQLG G ++ V +P LV+ +
Sbjct: 235 GKMYTFGGGEHGQLGHGDKVNKV-----------------KPTLVKD--------LDGVF 269
Query: 291 VKEIACGGRHSAVVT 305
+ +I CG HS +T
Sbjct: 270 LTQITCGWSHSVALT 284
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 67/227 (29%), Positives = 97/227 (42%), Gaps = 44/227 (19%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+PE++P++S I + G F+LA + G L WG + GQ L G +
Sbjct: 109 APEQAPVVSNIVS-----------VAAGRLFSLALASDGSLWAWG-GNYYGQ--LGMGDN 154
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P P + V A G H ++ T++GEV+ G D G G
Sbjct: 155 DNRLTPSKTPGLSDVAAIAGGDYHALAATQSGEVWAMG----------RNDHGQLGF--- 201
Query: 152 DSTGKQSALPTEQAPPSDKR---AGE---EVVKRRKTSSAREESENPA-----SGDEFFT 200
TG + P + A S+ + AGE +K T A +E+ +G+ T
Sbjct: 202 --TGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVAT 259
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+P V N IT +AAG RH + L++ G VW WG G GQLG G
Sbjct: 260 PAPIAVLSN----ITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFG 302
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 79/298 (26%), Positives = 121/298 (40%), Gaps = 47/298 (15%)
Query: 47 CGGDSWKDVCG-GGCG-----------FALATSESGKLITWGSADDEGQSYLTSGKHGET 94
C GD +K G GCG F+LA G L +WG + GQ L G+
Sbjct: 965 CPGDFFKSQPGFSGCGNPNPMVAAGGNFSLALKTDGSLWSWGD-NGTGQLGLGLGQSVNV 1023
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P + K AAG H +++ G V++WG+ ++ GS+G++ +
Sbjct: 1024 FTPTKVDALPPAAKIAAGDNHALALAPDGSVWSWGY-----NSDGQLGLGSSGTYSTKNR 1078
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGV 212
++ + A + + V R + S GD + +P V N
Sbjct: 1079 PQKINAISNVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV--NAIS 1136
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGK 269
+ +AAG ++L L+ G VW WG +GQLGLG + TP + L + A+G+
Sbjct: 1137 NVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDN-EDRNTPQKVEVLSNVAAIAAGE 1195
Query: 270 DRPL-LVRQGSVNSSGKAGR--------------------SYVKEIACGGRHSAVVTD 306
D L L R GSV S G+ R S +K IA G HS +++
Sbjct: 1196 DHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFAISE 1253
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 21/216 (9%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P K L P A++ GD+ ALA + G + +WG D +SG +
Sbjct: 1025 TPTKVDALPP-AAKIAAGDN----------HALALAPDGSVWSWGYNSDGQLGLGSSGTY 1073
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P + ++V A G +H ++V G +++WG+ G ++ K
Sbjct: 1074 STKNRPQKINAISNVAAIACGGSHSLAVARDGSLWSWGY-------NYYGQLGLGDNYSK 1126
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFFTLSPCLVTLNP 210
+ K +A+ A + + + + S + S+ GD +P V +
Sbjct: 1127 TTPQKVNAISNVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS 1186
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
V +AAG H+L L+ G VW WG GQLGL
Sbjct: 1187 NV--AAIAAGEDHSLALTRDGSVWSWGRNSRGQLGL 1220
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 49/192 (25%), Positives = 75/192 (39%), Gaps = 10/192 (5%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G ALA + G + +WG T G + P + ++V A G +H
Sbjct: 550 AAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHS 609
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G ++WG+ G + K + K +AL A + R +
Sbjct: 610 LALARDGSFWSWGY-------NYYGQLGLGDNVSKTTPRKVNALSNVVAMAAGDRHSLAL 662
Query: 177 VKRRKTSSAREESENPAS-GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
S + + GD +P V N + +AAG RH+L L+ G VW
Sbjct: 663 TLDGSLWSWGDNTYGQLGLGDNDHRNTPRKV--NAISNVVAIAAGYRHSLALTRDGSVWS 720
Query: 236 WGYGGEGQLGLG 247
WG GQLGLG
Sbjct: 721 WGNNTRGQLGLG 732
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 28/225 (12%)
Query: 27 YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
Y P+K +S + A CGG +LA + G L +WG + GQ L
Sbjct: 1073 YSTKNRPQKINAISNVAAIACGGSH-----------SLAVARDGSLWSWGY-NYYGQLGL 1120
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
TP+ + ++V AAG + +++T G V++WG G
Sbjct: 1121 GDNYSKTTPQK--VNAISNVAAIAAGEYYSLALTRDGSVWSWG-------DNSDGQLGLG 1171
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA---SGDEFFTLSP 203
+ +++ K L A + + + + S S D+ T P
Sbjct: 1172 DNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQP 1231
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
N I +AAG H+ +S+ G W WGY +GQLG+G+
Sbjct: 1232 VTTISN----IKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGT 1272
Score = 47.4 bits (111), Expect = 0.010, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 24/223 (10%)
Query: 27 YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
Y P+K +S + A CGG +LA + G +WG + GQ L
Sbjct: 584 YSTENRPQKINAISNVAAIACGGSH-----------SLALARDGSFWSWGY-NYYGQ--L 629
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
G + P + ++VV AAG H +++T G +++WG G
Sbjct: 630 GLGDNVSKTTPRKVNALSNVVAMAAGDRHSLALTLDGSLWSWG-------DNTYGQLGLG 682
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFFTLSPCL 205
+ +++ K +A+ A + R + + S + GD +P
Sbjct: 683 DNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQP 742
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
VT +K +A G +++ +S+ G VW WGY GQLG+G+
Sbjct: 743 VTTISNIK--AIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGT 783
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 25/122 (20%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH--- 264
+N + +A GG H+L L+ G W WGY GQLGLG + TP + L +
Sbjct: 593 INAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKT-TPRKVNALSNVVA 651
Query: 265 -AASGKDRPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAV 303
AA + L GS+ N+ G+ G S V IA G RHS
Sbjct: 652 MAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLA 711
Query: 304 VT 305
+T
Sbjct: 712 LT 713
Score = 41.6 bits (96), Expect = 0.43, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 67/198 (33%), Gaps = 64/198 (32%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A +E G + WG+ G L G P + + A V A+GW H +++T
Sbjct: 279 AMALAEDGSVWAWGA---NGSGQLGFGDFETPKAPGRVSSLADVTAIASGWFHSLALTSD 335
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G ++ WG G D+T QS LP + + S+
Sbjct: 336 GVLWAWG-------------NNGDGRLGTDATSDQS-LPAQVSSISNA------------ 369
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
A G RH+L ++ G VW WG G
Sbjct: 370 --------------------------------VSFAGGQRHSLAIAADGSVWSWGGNAYG 397
Query: 243 QLGLGSRIKMVPTPHLIP 260
QLG+ S + P L P
Sbjct: 398 QLGVES---LTPASVLTP 412
Score = 40.8 bits (94), Expect = 0.82, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 96/243 (39%), Gaps = 25/243 (10%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF---PLPTEASVVKAAAGW 113
G GF+LA G + +WG+ + GQ L G++ + P LP AS+ AAG
Sbjct: 498 AAGGGFSLALKTDGSVWSWGN-NGSGQLGLGLGENDDVFTPTNVDALPLAASI---AAGG 553
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++ G V++WG S ++ K +A+ A G
Sbjct: 554 GHALALASDGSVWSWGRN----SVGQLGLGTGGTYSTENRPQKINAISNVAAIAC---GG 606
Query: 174 EEVVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + S N GD +P V N + +AAG RH+L L+
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKV--NALSNVVAMAAGDRHSLALTL 664
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGKDRPLLVRQGSVNSSGK 285
G +W WG GQLGLG TP + + + AA + L R GSV S G
Sbjct: 665 DGSLWSWGDNTYGQLGLGDN-DHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSWGN 723
Query: 286 AGR 288
R
Sbjct: 724 NTR 726
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ LCG G G L T E G++ WG G S L +G
Sbjct: 55 GTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCT-EDGEVYAWG---HNGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T VV+ A G H ++++ G++Y WG+ C G
Sbjct: 111 TTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASG--------- 195
GS ST Q PT + S+ G+ VV +TSS S G
Sbjct: 161 GS---GSTANQ---PTPR-RVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQL 213
Query: 196 ---DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ L+PC V GV I ++A G HTL L+D G ++ WG GQLG G++
Sbjct: 214 GLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNK 270
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H++ LS G ++ WGY GQ+G GS PTP +
Sbjct: 116 ITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ-PTPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL+ A G+ + +V G V N +G+ G
Sbjct: 175 SNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVC 234
Query: 291 VKEIACGGRHSAVVTD 306
+ +IACG H+ +TD
Sbjct: 235 ILQIACGYAHTLALTD 250
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y WGY G S P P R+ K V G CG ++A +G++ WG
Sbjct: 149 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + TP +++ A G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
A ++ + TG +S + +P E VV+ SA + SG +
Sbjct: 259 -------ANTYGQLGTGNKS---NQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 308
Query: 199 F 199
Sbjct: 309 M 309
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-------------------- 154
H ++++ +G +Y+WG E FG G +S
Sbjct: 202 HSMALSMSGNIYSWGKNE----------FGQLGLGHTESKDYPSLIEGLDNQKVEFVACG 251
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G SAL T+ AG K + ++E L PCLV G ++
Sbjct: 252 GSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRV 297
Query: 215 TKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
T++A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 298 TQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ +G N V+ +ACGG HSA++T
Sbjct: 227 ----HTES-KDYPSLI-EGLDNQK-------VEFVACGGSHSALLT 259
>gi|118777951|ref|XP_308369.3| AGAP007506-PA [Anopheles gambiae str. PEST]
gi|116132148|gb|EAA04658.3| AGAP007506-PA [Anopheles gambiae str. PEST]
Length = 455
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 102/269 (37%), Gaps = 59/269 (21%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G LA +E G ++ WG+ G+ +T + P + E V G H
Sbjct: 172 GRAHVLALTEDGSVLAWGNNAYGQCGRKIVTEEDYFRNPVVNTIRLEEPVQAIECGQDHS 231
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+ +T+AG VY+ GW D G AG G+ + T P GE V
Sbjct: 232 LMLTKAGRVYSCGW----------SDDGQAGQ------GRYGLIDTP-GPAEGDMKGERV 274
Query: 177 VKRRKTSSAREESENPASGDEF------FTLSPCLVTLNPGV-------------KITKV 217
VK +SS GD F + + NP + KI +
Sbjct: 275 VK--VSSSCDTILAINDKGDLFGWGNSEYGQLGDVAQDNPQINIPRYLPFAKECGKIVDI 332
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
AA G + L L++ G V+ WGY G LG G ++ PTP IP P L +
Sbjct: 333 AAAGSYCLALNEHGDVFSWGY---GILGFGPEVQHRPTPTRIP-----------PALFGR 378
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ + K V IACG HSA + D
Sbjct: 379 NEFSPNAK-----VISIACGITHSAAIND 402
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + A ++ +G+ L +PC
Sbjct: 168 Q-PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCR 226
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 227 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 235 VQRVACGYAHTLVLTD 250
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 144
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 117 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 173
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 174 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208
>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
Length = 1051
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 78/307 (25%), Positives = 122/307 (39%), Gaps = 60/307 (19%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSRIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQLGL K + L + S ++ P V+ V I+CG
Sbjct: 219 AGQLGLSDE-KGIKQGALDKTENIRGLYSNRESPCHVKLLRTQK--------VVYISCGD 269
Query: 299 RHSAVVT 305
H+AV+T
Sbjct: 270 EHTAVLT 276
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 84/221 (38%), Gaps = 65/221 (29%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P ++ S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY-NNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ VV A G C++V + GEVY WG + G S+G
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-------------YNGNGQLGLGSSGN 244
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q PT PC V G+++ +
Sbjct: 245 Q---PT----------------------------------------PCRVAALQGIRVQR 261
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 262 VACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 120
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 121 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 167
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + A ++ +G+ L +PC
Sbjct: 168 Q-PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCR 226
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 227 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 278
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 174
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 235 VQRVACGYAHTLVLTD 250
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 144
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 33/215 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTINQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + A +S +G+ L +PC V G+++ +VA G
Sbjct: 208 VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYA 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 268 HTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S I PIP R+ G K V CG +A +SG++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS I P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTINQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 232
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 22/225 (9%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ S +V GS + + +
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN---SGQV----GSGSTVNQPIPRR 202
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN----PASGDEFFTLSPCLVTLNPGV 212
+ + + + T N G+ +PC V G+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI 262
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 263 RVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 264 VQRVACGYAHTLVLTD 279
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 22/225 (9%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG+ + GS + + +
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN-------SGQVGSGSTVNQPIPRR 197
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN----PASGDEFFTLSPCLVTLNPGV 212
+ + + + T N G+ +PC V G+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGI 257
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 258 RVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 251
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 251
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 82/210 (39%), Gaps = 30/210 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L+ PE +V A GW H VSV+ +G
Sbjct: 192 AITEGGDLYGWGWGR-YGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGA 250
Query: 125 VYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
+YT+GW + +G G FQ D + + P S G R T
Sbjct: 251 LYTYGWSK----------YGQLGHGDFQ-DHLVPRKLEALKDVPISQISGG-----WRHT 294
Query: 183 SSAREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ E+ + G D SP V KI +VA G RHTL L++
Sbjct: 295 MAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKN 354
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
++ WG G GQLG G I TP +I L
Sbjct: 355 IFSWGRGASGQLGHGEIIDR-NTPKMIDAL 383
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 29/194 (14%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGWAHCVSVTE- 121
SG+++ +WG +D GQ L G + P P F +P SV+ A H ++ ++
Sbjct: 38 SGQMVCSWGRGED-GQ--LGHGDSEDRPVPTVLTSFDVPRVTSVICGAD---HTIAYSDD 91
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEE 175
++Y+WGW DFG G F + +Q D
Sbjct: 92 EMQLYSWGWG----------DFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ S R ++ G+ +L P + GV + +AAG HT +++ G ++G
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG 201
Query: 236 WGYGGEGQLGLGSR 249
WG+G G LGL R
Sbjct: 202 WGWGRYGNLGLSDR 215
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A +E GKL WG + GQ + +P P E +V+ A GW H +
Sbjct: 289 GGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTL 347
Query: 118 SVTEAGEVYTWG 129
++TE +++WG
Sbjct: 348 ALTENKNIFSWG 359
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 82/210 (39%), Gaps = 30/210 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L+ PE +V A GW H VSV+ +G
Sbjct: 192 AITEGGDLYGWGWGR-YGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGA 250
Query: 125 VYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
+YT+GW + +G G FQ D + + P S G R T
Sbjct: 251 LYTYGWSK----------YGQLGHGDFQ-DHLVPRKLEALKDVPISQISGG-----WRHT 294
Query: 183 SSAREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ E+ + G D SP V KI +VA G RHTL L++
Sbjct: 295 MAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKN 354
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
++ WG G GQLG G I TP +I L
Sbjct: 355 IFSWGRGASGQLGHGEIIDR-NTPKMIDAL 383
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 29/194 (14%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGWAHCVSVTE- 121
SG+++ +WG +D GQ L G + P P F +P SV+ A H ++ ++
Sbjct: 38 SGQMVCSWGRGED-GQ--LGHGDSEDRPVPTVLTSFDVPRVTSVICGAD---HTIAYSDD 91
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEE 175
++Y+WGW DFG G F + +Q D
Sbjct: 92 EMQLYSWGWG----------DFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ S R ++ G+ +L P + GV + +AAG HT +++ G ++G
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYG 201
Query: 236 WGYGGEGQLGLGSR 249
WG+G G LGL R
Sbjct: 202 WGWGRYGNLGLSDR 215
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A +E GKL WG + GQ + +P P E +V+ A GW H +
Sbjct: 289 GGWRHTMAVAEDGKLYGWG-WNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTL 347
Query: 118 SVTEAGEVYTWG 129
++TE +++WG
Sbjct: 348 ALTENKNIFSWG 359
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 43/260 (16%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAG 112
GG F+L + +G++ +WG +D+GQ L GK + E P ++ +VV+ G
Sbjct: 99 AGGSEFSLVITTAGEVFSWGR-NDKGQ--LGRGKLSKEEERKPKLMKSLAVCTVVQITCG 155
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ----SALPTEQAPPS 168
HC+++T+ G +++WG C ++ GS+ SF T +Q +P Q
Sbjct: 156 ANHCLALTDDGRLFSWG---CNKYGQL--GLGSSHSFH--DTPQQIVCLRGIPIAQIASG 208
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ R + DE+ P L K+ ++ G HT+ L+
Sbjct: 209 GNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALT 268
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G V+ +G GG GQLG S ++P + ++ GSV
Sbjct: 269 KEGGVFSFGAGGFGQLGHNS-----TQNEILP----------KRVMELMGSV-------- 305
Query: 289 SYVKEIACGGRHSAVVTDMS 308
+ ++ACG RH+ + S
Sbjct: 306 --ISQVACGRRHTVAFSPSS 323
Score = 37.7 bits (86), Expect = 7.4, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 23/102 (22%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
LV+ +++ + A G +L+++ G+V+ WG +GQLG G K
Sbjct: 86 LVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSK------------- 132
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ +P L++ +V + V +I CG H +TD
Sbjct: 133 --EEERKPKLMKSLAVCT--------VVQITCGANHCLALTD 164
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 196
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + A ++ +G+ L +PC
Sbjct: 197 Q-PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCR 255
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 264 VQRVACGYAHTLVLTD 279
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 173
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 35/224 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 18 PRRLESLNGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 73
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG + ++G ST
Sbjct: 74 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 120
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + S A + +G+ L +PC
Sbjct: 121 Q-LIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 179
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ G+++ +VA G HTL+L+D GQV+ WG GQLG G++
Sbjct: 180 IAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 223
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 29/135 (21%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS + +
Sbjct: 69 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVT 128
Query: 260 PCLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------YV 291
CL+ + A G+ + +V G V N +G+ G V
Sbjct: 129 GCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRV 188
Query: 292 KEIACGGRHSAVVTD 306
+ +ACG H+ V+TD
Sbjct: 189 QRVACGYAHTLVLTD 203
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S IP R+ G K V CG ++A +G++ WG
Sbjct: 102 VFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 160
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 161 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 211
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 92 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 147
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 148 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 194
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 195 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 254
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 255 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 305
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 143 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 201
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 202 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 261
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 262 VQRVACGYAHTLVLTD 277
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 234
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 235 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 285
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 84 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 138
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 139 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 171
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V + A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVA 207
Query: 174 EEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + S A + +G+ L +PC + G+++ +VA G
Sbjct: 208 VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYA 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
HTL+L+D GQV+ WG GQLG G++ P P ++
Sbjct: 268 HTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIV 305
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLT 168
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 149
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 150 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 196
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + A ++ +G+ L +PC
Sbjct: 197 Q-PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCR 255
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
V G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 256 VAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 264 VQRVACGYAHTLVLTD 279
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 173
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V + A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTANQ-PIPRRVTGCLQNKVA 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A + +SG++ +PC + G+++ +VA
Sbjct: 184 VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRIAALQGIRVQRVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQV+ WG GQLG G++ P P ++
Sbjct: 241 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIV 281
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 234
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 235 VQRVACGYAHTLVLTD 250
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 112 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLT 144
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 69/281 (24%), Positives = 104/281 (37%), Gaps = 102/281 (36%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 94 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 153
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRAG 173
+++ G+ +TWG K+S G Q L E QA P R+
Sbjct: 154 LALAADGQFFTWG---------------------KNSHG-QLGLGKEFPSQASPQRVRSL 191
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
E G+ + +VAAGG H+ LS G V
Sbjct: 192 E------------------------------------GIPLAQVAAGGAHSFALSLSGAV 215
Query: 234 WGWGYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV-- 280
+GWG GQLGL +K++ T + I C EH A +L + G V
Sbjct: 216 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFT 269
Query: 281 ---NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 270 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 310
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 8 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 64
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 65 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 113
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 114 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 142
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 143 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 187
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 188 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 247
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 248 VVYISCGEEHTAVLT 262
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|348682073|gb|EGZ21889.1| hypothetical protein PHYSODRAFT_345761 [Phytophthora sojae]
Length = 821
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-------VVKAAAGWAH 115
+LA +E G++ WG EGQ L G LP V K + G +H
Sbjct: 47 SLALNEFGQVFAWGRGR-EGQ--LGLGDVAGVASAVALPRRVGGELAGQLVTKISCGESH 103
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTR-DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
+++T +G+V+ WG +P AKV + G+A +T + + L +E+ + +
Sbjct: 104 SLALTVSGDVFMWG---LLPVAKVLYGEDGAATDASDRATVELAGLSSEELRRAQRARSR 160
Query: 175 EVVKR-----------RKTSSAREESENPASGDEFFTL-SPCLV-TLNPG----VKITKV 217
E ++R R + E++ + + + T+ +PC+ L G + +T +
Sbjct: 161 EELRRHMDDSIMARLVRDSMQVYEDAGDASDSVKVQTVRAPCMTPRLCTGPLSRLVVTNI 220
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC----LEHAASGKDRPL 273
AAG H+L+ + G V+ GY GQLGLGSR + +EH A G+ L
Sbjct: 221 AAGFAHSLVTTSDGAVFSCGYNDNGQLGLGSRRNSAEFQRIRALEGYFIEHIACGQQHSL 280
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
I +AG RH+L L++ GQV+ WG G EGQLGLG
Sbjct: 37 IVDFSAGERHSLALNEFGQVFAWGRGREGQLGLG 70
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 92/228 (40%), Gaps = 35/228 (15%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
LCG G G +AT+E G++ TWG S L +G P + T
Sbjct: 265 LCGKKITCLSYGSGPHVVVATAE-GEVYTWG---HNAYSQLGNGTTNHGLIPCHVSTNLV 320
Query: 105 --SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
VV+ A G H + +T GEVY WG + ++G ST Q +P
Sbjct: 321 NKKVVEVACGSHHSLVLTSDGEVYAWG-------------YNNSGQVGSGSTANQP-IPR 366
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPG 211
+ + + S A ES +G+ L +PC + G
Sbjct: 367 RVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 426
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTP 256
+++ +V G HTL+L+D GQ++ WG GQLG G++ +P P
Sbjct: 427 IRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVP 474
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC V+ N K+ +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 310 LIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQ-PIPRRV 368
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 369 TSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 428
Query: 291 VKEIACGGRHSAVVTD 306
V+ + CG H+ V+TD
Sbjct: 429 VQRVTCGYAHTLVLTD 444
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S PIP R+ K CG ++A ESG++ WG
Sbjct: 343 VYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGY- 401
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V + G+AH + +T+ G++Y WG
Sbjct: 402 --NGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWG------- 452
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+G G+ K + +P E+ D+ TS+A+ +S
Sbjct: 453 ---ANSYGQLGTGNKSNQSYPIPVPVEK----DRIIEIAACHSAHTSAAKTQS 498
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 27/114 (23%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G KIT ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 250 TGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGT---- 305
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H LIPC S N K V E+ACG HS V+T
Sbjct: 306 --TNHGLIPC---------------HVSTNLVNKK----VVEVACGSHHSLVLT 338
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 33/215 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 111 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 166
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 167 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTINQ-PIPRRVTGCLQNKVV 212
Query: 174 EEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + A +S +G+ L +PC V G+++ +VA G
Sbjct: 213 VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYA 272
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 273 HTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S I PIP R+ G K V CG +A +SG++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS I P P +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-PIPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 264 VQRVACGYAHTLVLTD 279
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 173
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTINQPIPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 237
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|395861750|ref|XP_003803141.1| PREDICTED: RCC1 domain-containing protein 1 [Otolemur garnettii]
Length = 376
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 43/199 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ EP P EA + +
Sbjct: 166 GAEHALLLGWAGQVFSWGG-----------GRHGQLGHGSLEAEPEPRLLEALQGLPMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G+VY WGW E A TR +L ++AP +
Sbjct: 215 VAAGGWHSVCVSETGDVYVWGWNESGQLALPTR-----------------SLAEDRAPAA 257
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRHTLI 226
+ G + +A E PA F ++ P L+ L G K + G RHT +
Sbjct: 258 VEATGLNKDESEVKRAAVGEDGAPAP---FISIQPFPALLDLPLGSDAAKASCGSRHTAV 314
Query: 227 LSDMGQVWGWGYGGEGQLG 245
++ G+++ WG+G GQLG
Sbjct: 315 VTRTGELYTWGWGKYGQLG 333
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P TL P + ++ G H L+L GQV+ WG G GQLG GS ++ P P L+ L
Sbjct: 149 PFYRTLAPELLARRLELGAEHALLLGWAGQVFSWGGGRHGQLGHGS-LEAEPEPRLLEAL 207
Query: 263 E 263
+
Sbjct: 208 Q 208
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPC 261
P L+ G+ + +VAAGG H++ +S+ G V+ WG+ GQL L +R + P +
Sbjct: 201 PRLLEALQGLPMAEVAAGGWHSVCVSETGDVYVWGWNESGQLALPTRSLAEDRAPAAVEA 260
Query: 262 ---------LEHAASGKD---RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ AA G+D P + Q S + +CG RH+AVVT
Sbjct: 261 TGLNKDESEVKRAAVGEDGAPAPFISIQPFPALLDLPLGSDAAKASCGSRHTAVVT 316
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|297807193|ref|XP_002871480.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
lyrata]
gi|297317317|gb|EFH47739.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
lyrata]
Length = 554
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 82/201 (40%), Gaps = 63/201 (31%)
Query: 98 FPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P+P + S ++ AAG AH +++T G VY+WG G F + TG
Sbjct: 8 LPIPEDLSRKIISLAAGEAHTIALTGDGCVYSWG----------------RGMFGRLGTG 51
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
K+S +E+V R E N A GD ++I
Sbjct: 52 KES---------------DELVPVR----VEFEFPNQAEGDR--------------IRIV 78
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLL 274
+AAG H+L +SD G VW WGY GQLG + P LI L E AS
Sbjct: 79 GIAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPC--LIKNLFEQGAS------- 129
Query: 275 VRQGSVNSSGKAGRSYVKEIA 295
S+N SG+ RS +K A
Sbjct: 130 --ISSLNDSGREARSDLKVCA 148
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 33/106 (31%)
Query: 211 GVKITKVAAGGRHTLIL-----------SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G + KVA G H + L D+ ++ WG GQLG+G R
Sbjct: 198 GRTVLKVACGDEHVVALVGPGDINKDNSYDVSVLYSWGNNHHGQLGVGDR---------- 247
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ RP +V + NS V EIACG H+A++T
Sbjct: 248 -------ESRPRPQIVETFNQNSGLT-----VYEIACGAHHTALLT 281
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 69/281 (24%), Positives = 104/281 (37%), Gaps = 102/281 (36%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRAG 173
+++ G+ +TWG K+S G Q L E QA P R+
Sbjct: 150 LALAADGQFFTWG---------------------KNSHG-QLGLGKEYPSQASPQRVRSL 187
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
E G+ + +VAAGG H+ LS G V
Sbjct: 188 E------------------------------------GIPLAQVAAGGAHSFALSLSGAV 211
Query: 234 WGWGYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV-- 280
+GWG GQLGL +K++ T + I C EH A +L + G V
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFT 265
Query: 281 ---NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 79/315 (25%), Positives = 120/315 (38%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRS---------YVK------ 292
IP + AA G L G+V N++G+ G S +VK
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK 243
Query: 293 --EIACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 79/315 (25%), Positives = 120/315 (38%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRS---------YVK------ 292
IP + AA G L G+V N++G+ G S +VK
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK 243
Query: 293 --EIACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|355778311|gb|EHH63347.1| RCC1 domain-containing protein 1 [Macaca fascicularis]
Length = 262
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 41/193 (21%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVKAAAGW 113
L +G++ +WG G+HG+ E P EA ++ + AAG
Sbjct: 57 LLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGG 105
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRA 172
H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 106 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN--------------- 150
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
E+ + ++T + + P + F P L+ L G KV+ G RHT +++ G+
Sbjct: 151 -EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVVTRTGE 206
Query: 233 VWGWGYGGEGQLG 245
++ WG+G GQLG
Sbjct: 207 LYTWGWGKYGQLG 219
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 85 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 142
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGRHSAVV 304
E +D + R G V A G VK ++CG RH+AVV
Sbjct: 143 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVK-VSCGSRHTAVV 201
Query: 305 T 305
T
Sbjct: 202 T 202
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G + WG + GQ L G H E P +P V AAG H +V++ G
Sbjct: 70 FAVRQDGTVWAWG-LNVWGQ--LGDGTHTERHTPVQVPGLTGVTAIAAGRRHTFAVSQDG 126
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG D+G G + LP E + AG RR T
Sbjct: 127 TVWAWG----------DNDWGQLGDGTRADRHTPVQLP-ELTGVTAIAAG-----RRHTF 170
Query: 184 SAREESENPASGDEFF----------TLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQ 232
+ R++ A GD + L+P V PG+ +T +AAG HTL + G
Sbjct: 171 AVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQV---PGLTGVTAIAAGDYHTLAVRQDGT 227
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ 277
VW WG GQLG G+ + + TP +P L ++G+ + VRQ
Sbjct: 228 VWAWGNNALGQLGDGTYTERL-TPVQVPGLTGVTAISAGESHTVAVRQ 274
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + G + WG+ + GQ L G + E P +P V +AG +H V+V + G
Sbjct: 220 LAVRQDGTVWAWGN-NALGQ--LGDGTYTERLTPVQVPGLTGVTAISAGESHTVAVRQDG 276
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG +G G D T P + S A E RR T
Sbjct: 277 TVWAWG----------DNVWGQLG----DGTRTDRLTPVQVPGLSGVTAIAE--GRRHTF 320
Query: 184 SAREESENPASGDEFF----------TLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQ 232
+ R++ A G F+ L+P V P + +T +AAG HTL + G
Sbjct: 321 AVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQV---PDLTSVTAIAAGDYHTLAVRQDGT 377
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ 277
VW WG GQLG G+ + TP +P L A+G+ + +RQ
Sbjct: 378 VWAWGDNVWGQLGDGTYTDRL-TPVQVPGLTGVTAIAAGESHTVAMRQ 424
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 100/256 (39%), Gaps = 31/256 (12%)
Query: 31 TSPEKSPILSP------IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+S SP++ P + A L GDS +A + G + WG + GQ
Sbjct: 494 SSRSPSPVMVPGLTGVTVFAALAAGDS----------HTVAVMQDGTVWAWG-LNASGQ- 541
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
L G + P +P A V AAG AH ++ + G V++WG A G
Sbjct: 542 -LGDGATIDRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWG-------ANSYGQLG 593
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS-AREESENPASGDEFFTLSP 203
+ + S + L A + +++ S+ R G L+P
Sbjct: 594 DGTTTHRLSPVQVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTP 653
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL--IPC 261
V GV T VAAG HT+ L G VW WGY GQLG G+ + + + +
Sbjct: 654 VQVHGLTGV--TAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTD 711
Query: 262 LEHAASGKDRPLLVRQ 277
+ A+G + VRQ
Sbjct: 712 VTAIAAGYFHTVAVRQ 727
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 96/238 (40%), Gaps = 28/238 (11%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G + WG + GQ L G + P +P SV AAG H ++V + G
Sbjct: 320 FAVRQDGTVWAWG-LNFWGQ--LGDGTRSDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDG 376
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG V G G++ T Q +P + V R+
Sbjct: 377 TVWAWG-------DNVWGQLGD-GTYTDRLTPVQ--VPGLTGVTAIAAGESHTVAMRQDG 426
Query: 184 SAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
+ +N GD +T V + +T +AAG HTL + G V WG+
Sbjct: 427 TVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFNAY 486
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHA------ASGKDRPLLVRQ-GSV-----NSSGKAG 287
GQLG G+ + P+P ++P L A+G + V Q G+V N+SG+ G
Sbjct: 487 GQLGDGTSSRS-PSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLG 543
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 113/300 (37%), Gaps = 53/300 (17%)
Query: 10 ENEKMEECKETVVYMWG-----------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGG 58
+ + ++ V+ WG Y +P + P L+ + A + G+S
Sbjct: 366 DYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPGLTGVTA-IAAGES------- 417
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
+A + G + WG D L G + + P +P SV AAG H ++
Sbjct: 418 ---HTVAMRQDGTVWAWG---DNVWGQLGDGTYTDRLTPVQVPDLTSVTAIAAGDYHTLA 471
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP---------TEQAPPSD 169
V + G V WG F + G D T +S P T A +
Sbjct: 472 VRQDGTVCAWG-------------FNAYGQL-GDGTSSRSPSPVMVPGLTGVTVFAALAA 517
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILS 228
+ V + T A + + GD T+ + PG+ +T +AAG HTL
Sbjct: 518 GDSHTVAVMQDGTVWAWGLNASGQLGDGA-TIDRRIPVQIPGLAGVTAIAAGSAHTLAAG 576
Query: 229 DMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
G VW WG GQLG G+ R+ V P L AA L++ G+V++ G+
Sbjct: 577 QDGAVWSWGANSYGQLGDGTTTHRLSPVQVPGLTGVSAMAAGDAHSVALLQDGTVSAWGR 636
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 91/246 (36%), Gaps = 25/246 (10%)
Query: 10 ENEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
++ + ++ V+ WG G + + I IP ++ G G LA +
Sbjct: 519 DSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAG-VTAIAAGSAHTLAAGQ 577
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
G + +WG A+ GQ L G P +P V AAG AH V++ + G V W
Sbjct: 578 DGAVWSWG-ANSYGQ--LGDGTTTHRLSPVQVPGLTGVSAMAAGDAHSVALLQDGTVSAW 634
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSS 184
G +G G D T P + + A V R+ +
Sbjct: 635 G----------RNSWGQLG----DGTTAARLTPVQVHGLTGVTAVAAGSLHTVALRQDGT 680
Query: 185 AREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
N GD T V + +T +AAG HT+ + G VW WGY G
Sbjct: 681 VWAWGYNDLGQLGDGTTTRRLAPVQVQGLTDVTAIAAGYFHTVAVRQDGTVWAWGYNLWG 740
Query: 243 QLGLGS 248
QLG GS
Sbjct: 741 QLGDGS 746
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHA 265
PG+ +T AG HT+ + G W WG GQLG G+R + TP +P L
Sbjct: 4 PGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRL-TPVQVPGLTGVTAV 62
Query: 266 ASGKDRPLLVRQ 277
A+G+ VRQ
Sbjct: 63 AAGRHHTFAVRQ 74
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 106/279 (37%), Gaps = 50/279 (17%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + E E V+ Y GT +S + LCG K + G
Sbjct: 28 GTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H V++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P+ ++ + +
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTNCLHIK 181
Query: 180 RKTSSAREESENPAS-------------------GDEFFTLSPCLVTLNPGVKITKVAAG 220
R A ++ + A G+ L+P V V + ++ G
Sbjct: 182 RVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCG 241
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
HTL L+D G ++ WG GQLG G++ ++ H++
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPTHIM 280
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 30/204 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
G +A + +WG +D GQ HG+T + PLPT+ S + A A G
Sbjct: 22 GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDR-PLPTQLSALDAQHIDSIACG 74
Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+ E+Y+WGW DFG G L +Q
Sbjct: 75 ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ S R ++ G+ +L P + GV I VAAG H++
Sbjct: 125 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSV 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSR 249
+++ G+++GWG+G G LGLG R
Sbjct: 185 AITENGELYGWGWGRYGNLGLGDR 208
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 37/274 (13%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 162 PQKIQAFKGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 211
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ +G +YT+GW + +G G
Sbjct: 212 WNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSK----------YGQLGH---- 257
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 258 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS 317
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V ++ +++ G RHT+ +++ V+ WG G GQLG G I +P +I L
Sbjct: 318 PVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDR-NSPKIIEAL 376
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
+ G P + + SGK+G S + A
Sbjct: 377 --SVDGSAGPHIESSNTDLLSGKSGVSLSERYAV 408
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 31/214 (14%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 132 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 187
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +K
Sbjct: 188 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVNQPTPRRVTGCLQNKVVV 234
Query: 174 EEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ + + E G+ +PC V G+++ +VA G H
Sbjct: 235 TIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAH 294
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
TL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 295 TLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 328
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + PTP +
Sbjct: 166 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PTPRRV 224
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 225 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 284
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 285 VQRVACGYAHTLVLTD 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + P P R+ G K V CG +A +SG++ WG
Sbjct: 199 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 257
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 258 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 308
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 167 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPTPRR 223
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 224 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 258
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 107 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 161
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 162 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 194
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 251
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 87/235 (37%), Gaps = 67/235 (28%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEG 82
+G L P K P L + G D++ + CG +LA S G++ +WGS D+ G
Sbjct: 63 YGQLGHDQPRKRPQL------VSGLDAYS-IINVACGEMHSLALSRWGEVFSWGS-DNYG 114
Query: 83 Q-SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
Q + G P+ + VV+ AAG H V++T AGE++ WG
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWG----------AN 164
Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
DFG G + P E P +
Sbjct: 165 DFG--------QLGLGTITPYESTPTT--------------------------------- 183
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V G+ +A G HT +S G V+GWG GQLGL + K PT
Sbjct: 184 ----VCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFPT 234
Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+H TP+ SV+KAA G H + +T+ G+VY+ G + D+G G
Sbjct: 20 EHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCG----------SNDYGQLG-- 67
Query: 150 QKDSTGKQSALPTEQAPPS--DKRAGE--EVVKRRKTSSAREESENPAS-GDEF---FTL 201
D K+ L + S + GE + R S+N G + +
Sbjct: 68 -HDQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQI 126
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
P L+ ++ ++AAG RH++ L++ G+++ WG GQLGLG+ TP
Sbjct: 127 VPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTP 181
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 94/250 (37%), Gaps = 82/250 (32%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG ++ SE G + WG+ ++EGQ L G+ E P L + VV + G+ H
Sbjct: 148 ACGTYHSIILSEDGDVYVWGN-NNEGQ--LGLGEEVENSLPKKLKFKKEVVSVSCGYYHT 204
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
VT G +YT+G E G + S ++T QS
Sbjct: 205 ALVTRDGFLYTFGENELGK-------LGLSSSQLSNTTVPQSVAM--------------- 242
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
PA DE+ + V+ G RHT+ ++ G + W
Sbjct: 243 ---------------PADNDEYIS----------------VSCGARHTVAITKQGHCYAW 271
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G +GQLG G+++ V P I L SG+ S ++C
Sbjct: 272 GDGSQGQLGHGTKLLEVNEPKQIKKL--------------------SGQKCIS----VSC 307
Query: 297 GGRHSAVVTD 306
G H+AVVT+
Sbjct: 308 GESHTAVVTE 317
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 24/156 (15%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV+ A G H VTE+G +Y +G + D+G G S K P+
Sbjct: 40 VVEMACGDEHSAVVTESGRLYVFG----------SNDWGQLGLGHTKSLNK----PSFVK 85
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASG----------DEFFTLSPCLVTLNPGVKIT 215
P ++ + R T E + + G D+ L P + P ++I
Sbjct: 86 PLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIK 145
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
++A G H++ILS+ G V+ WG EGQLGLG ++
Sbjct: 146 QIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVE 181
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 109/279 (39%), Gaps = 50/279 (17%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P+ ++ + +
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTNCLHIK 181
Query: 180 RKTSSAREESENPASGD--EFF-----------------TLSPCLVTLNPGVKITKVAAG 220
R S A ++ + A D E + L+P V V + ++ G
Sbjct: 182 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCG 241
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
HTL L+D G ++ WG GQLG G++ ++ H++
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIM 280
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 38/210 (18%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V + A G
Sbjct: 82 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGS 137
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 138 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 183
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A + +SG++ +PC ++ G+++ +VA
Sbjct: 184 VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRISALQGIRVQRVAC 240
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G HTL+L+D GQV+ WG GQLG G++
Sbjct: 241 GYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 116 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 174
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 234
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 235 VQRVACGYAHTLVLTD 250
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 208 --NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 57 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 111
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 112 -TNHGLMPC---------------HISTNLSNKQ----VTEVACGSYHSLVLT 144
>gi|440796277|gb|ELR17386.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1595
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 109/261 (41%), Gaps = 49/261 (18%)
Query: 53 KDVCGGGC--GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-FPLPTEA----S 105
+ V GC GF +A S SGK+ WGS+ + K T P P A
Sbjct: 1359 RRVIKVGCASGFNVALSRSGKVYGWGSS----SLFPLRTKDNRTATPGIPHTIRALKGKR 1414
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV A G H + +T GEVY+ G G G+ + +T Q P +
Sbjct: 1415 VVDVACGEHHVLFITGQGEVYSLGT-------------GVLGALGQGTTVDQLVEPKQIL 1461
Query: 166 PPSDKRA-----GEE---VVKRRKTSSAREESENPASG----DEFFTLSPCLVTLNPGVK 213
+ A GE V+ R + ++ G + T PC + +K
Sbjct: 1462 ALQKEHAVRAAAGENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIK 1521
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVP--TPHLIPCLEHAASGK 269
ITK+AAG +H + +S+ G+V+ WG GQLG + ++VP P +P ++ AA GK
Sbjct: 1522 ITKIAAGHQHAMAISEYGEVYLWGANDAGQLGFETEDDEQLVPRHLPFGLPVVD-AAGGK 1580
Query: 270 DRPLLVRQGSVNSSGKAGRSY 290
+++ Q AGR Y
Sbjct: 1581 SHTVIIDQ--------AGRVY 1593
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 10 ENEKMEECKETVVYMWG-----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
EN M ++ VVY +G L P+ P P P + G A+
Sbjct: 1475 ENFSMVLTRDGVVYSFGAADKGQLGHPDPQDMPTGYPCPIDALAKIKITKIAAGH-QHAM 1533
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A SE G++ WG A+D GQ + + E P LP VV AA G +H V + +AG
Sbjct: 1534 AISEYGEVYLWG-ANDAGQLGFET-EDDEQLVPRHLPFGLPVVDAAGGKSHTVIIDQAGR 1591
Query: 125 VYTW 128
VY W
Sbjct: 1592 VYAW 1595
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 38/210 (18%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V + A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A + +SG++ +PC ++ G+++ +VA
Sbjct: 208 VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRISALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G HTL+L+D GQV+ WG GQLG G++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLMPC---------------HISTNLSNKQ----VTEVACGSYHSLVLT 168
>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60462899|gb|EAL61096.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 455
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 130/335 (38%), Gaps = 68/335 (20%)
Query: 9 EENEKMEECKETVVYMWGYLPGTSPEKSPILS--------PIPARLCGGDSWKDVCGGGC 60
E+NE + VYMWG KS +S P L + V GG
Sbjct: 99 EQNEN-DPTISNKVYMWG------TNKSGNMSLPSEQYRFPTTIDLLKNTFVEKVIGGRS 151
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
F L + GK++ +G ++ GQ L ++ P P ++ G H ++VT
Sbjct: 152 -FTLVLTRDGKVLGFGE-NNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDHSIAVT 209
Query: 121 EAGEVYTWGW-------RECVPSAKVT--------RDFGSAGSFQKDST-GKQSALPT-- 162
+AG V+ WG+ ++ V ++ + G AGS ++ + LPT
Sbjct: 210 KAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLV 269
Query: 163 ---EQAPPSDKRAGEE---VVKRRKT--SSAREESENPASGDEF--FTLSPCLVTLN-PG 211
EQ S+ G + ++ R S E G E P +
Sbjct: 270 PGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETN 329
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
KI ++++G HTL L+ G V+ G+G EG+LGLG S +D
Sbjct: 330 EKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLG----------------MDTSNRDS 373
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P L++ + N + + ++A GG HS + D
Sbjct: 374 PTLLKYFNQN------KIKIVKVAAGGSHSMALDD 402
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+KI KVAAGG H++ L D G+V+ WG G G+LG G+
Sbjct: 385 IKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGN 421
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 85/334 (25%), Positives = 130/334 (38%), Gaps = 88/334 (26%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +V AGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV-----NSSG 284
GQLGL +K++ T + I C EH A +L + G V S G
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKNGGVFTFGAGSCG 272
Query: 285 KAGR-----------------SYVKEIACGGRHS 301
+ G S V +IACG +H+
Sbjct: 273 QLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 129/323 (39%), Gaps = 63/323 (19%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ +S +P+ L G + + GG +LA +++G ++ WGS + GQ +
Sbjct: 73 GTTTARS---TPVTVGLPAGTTITALAAGGS-HSLALTDTGVVLAWGS-NSRGQLGDGTT 127
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
TP LP ++ AAG H +++T+ G V WG S G
Sbjct: 128 TDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWG-------------SNSNGQL 174
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEF 198
+T +S T P AG + ++ + ++ A+ GD
Sbjct: 175 GDGTTTARSTPVTVGLP-----AGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGT 229
Query: 199 FT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
T +P V+L G IT +AA H+L L+D G V WG GQLG G+ + P
Sbjct: 230 TTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPV 289
Query: 256 PHLIPC---LEHAASGKDRPL-LVRQGSV-----NSSGKAGR-----------------S 289
+P + A+G+ L L G+V NS+G+ G +
Sbjct: 290 TVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGT 349
Query: 290 YVKEIACGGRHSAVVTDMSYPIA 312
+ +A G HS +TD +A
Sbjct: 350 TITALAAGYYHSLALTDTGAVLA 372
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 13/191 (6%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
++LA +++G + WGS + GQ + TP LP ++ AA + H +++T+
Sbjct: 204 YSLALTDTGAALAWGS-NSRGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTD 262
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKR 179
G V WG + G G+ ST LP T + R+ V+
Sbjct: 263 TGAVLAWG-------SNSNGQLGD-GTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTS 314
Query: 180 RKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
A + N GD T +P V L G IT +AAG H+L L+D G V WG
Sbjct: 315 AGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWG 374
Query: 238 YGGEGQLGLGS 248
GQLG G+
Sbjct: 375 GNSYGQLGDGT 385
>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1173
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 34/251 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G GF++A + G L +WG + GQ +TS P P + V+A+AG +H
Sbjct: 769 GYGFSVALASDGSLYSWGD-NSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHV 827
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQAPPSDKRAGEE 175
V+++ G +YTWG SAG + T A P + P+D
Sbjct: 828 VALSSDGNIYTWG-------------DNSAGQLGRTVTSNNPADKPGKADTPADVTFTSV 874
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP-----------GVKITKVAAGGRHT 224
+ T + + + GD T P G+ T+ +AG H+
Sbjct: 875 SAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHS 934
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIK------MVPTPHLIPCLEHAASGKDRPLLVRQG 278
+ +SD G ++ WG G+LG + I TP + + +A GK L G
Sbjct: 935 VAVSDDGSIYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDG 994
Query: 279 SVNSSGKAGRS 289
S+ + G +G++
Sbjct: 995 SLYTWGDSGKT 1005
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 29/196 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G +A G + TWG T+ + P P + +A+AG +H V+
Sbjct: 877 GQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVA 936
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V++ G +YTWG + ++ RD + P ++ +D AG V
Sbjct: 937 VSDDGSIYTWG---DTANGRLGRD--------------TNITPADKPGKADTPAG---VT 976
Query: 179 RRKTSSAREESENPASGDEFFTLS---------PCLVTLNPGVKITKVAAGGRHTLILSD 229
+ S+ + S S +T P V G+ T+ +AG + L L
Sbjct: 977 FTQASAGGKHSIALGSDGSLYTWGDSGKTSAGRPNKVDTPAGITFTQASAGASYCLALGS 1036
Query: 230 MGQVWGWGYGGEGQLG 245
G ++ WG +GQLG
Sbjct: 1037 DGNLYSWGDNAKGQLG 1052
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 71/210 (33%), Gaps = 64/210 (30%)
Query: 39 LSPIPAR---LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
L+P PAR + D GG + A G L TWG T+ K P
Sbjct: 700 LTPPPARGIRISQAD-------GGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHP 752
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P + V +AG+ V++ G +Y+WG
Sbjct: 753 SKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWG-------------------------- 786
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
D G+ + R TS+ NPA+ P V G+
Sbjct: 787 -------------DNSRGQ--LGRTVTSN------NPAN-------RPHKVEAPAGITFV 818
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ +AGG H + LS G ++ WG GQLG
Sbjct: 819 QASAGGSHVVALSSDGNIYTWGDNSAGQLG 848
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 82/222 (36%), Gaps = 29/222 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA---AGWAH 115
G +++A G L +WG + G P + A V K AG
Sbjct: 341 GTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWT 400
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++ + G +Y+WGW E +G G + + +Q P + P+ +
Sbjct: 401 SLATSSDGSLYSWGWNE----------YGQLG--RNTAPARQDRTPRKVTMPAGVTKFTK 448
Query: 176 VVKRRKTSSAREESENPAS-------------GDEFFTLSPCLVTLNPGV-KITKVAAGG 221
V + S A N S G + + P V GV + T+V+AG
Sbjct: 449 VSAEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQFTEVSAGY 508
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H+L + G ++ WG G+LG + K +P ++ E
Sbjct: 509 SHSLAIGSDGNLYSWGQNKYGELGRPTSGKYDSSPGMVAFPE 550
>gi|194206275|ref|XP_001917412.1| PREDICTED: RCC1 domain-containing protein 1 [Equus caballus]
Length = 197
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P P + + AAG H VSV+E G+VY WGW E A TR G K
Sbjct: 22 PRPLEALQGLPMAEVAAGGWHSVSVSETGDVYIWGWNESGQLALPTRSLAEDG---KTVA 78
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G+ + L G +V + T+ + + P + F P L+ L G +
Sbjct: 79 GEAAGL---------HEGGPDV---KSTAGGEDGAPTPFIAVQPF---PALLDLPRGSEA 123
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
K + G RHT +++ G+++ WG+G GQLG
Sbjct: 124 VKASCGSRHTAVVTRTGELYTWGWGKYGQLG 154
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI- 259
L P + G+ + +VAAGG H++ +S+ G V+ WG+ GQL L +R +
Sbjct: 20 LEPRPLEALQGLPMAEVAAGGWHSVSVSETGDVYIWGWNESGQLALPTRSLAEDGKTVAG 79
Query: 260 ---------PCLEHAASGKD---RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P ++ A G+D P + Q S + +CG RH+AVVT
Sbjct: 80 EAAGLHEGGPDVKSTAGGEDGAPTPFIAVQPFPALLDLPRGSEAVKASCGSRHTAVVT 137
>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
Length = 1800
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 106/269 (39%), Gaps = 69/269 (25%)
Query: 52 WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
WK V CGF L TSE K+ + G + GQ + + P P ++ +V+
Sbjct: 72 WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQTGQLGIENVVDSAVPLPVDTLSKFNVI 129
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG ++TEAG++Y WG + +G G+ K + S PT P
Sbjct: 130 KIKAGNNVSAAITEAGDLYCWG----------SSAYGQLGN-GKMNAKLHSFTPTTILNP 178
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
A E ++P + ++ T + G +HT+ +
Sbjct: 179 LIPDA---------------EKDDP---------------IYQNLQYTNICFGAQHTIAI 208
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSG- 284
S G ++ WG GQLGLG K+VP P HL D R G +NS G
Sbjct: 209 STTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHL-----------DNSFERRAGHINSLGE 257
Query: 285 --------KAGRSYVKEIACGGRHSAVVT 305
K V +IACG HSA++T
Sbjct: 258 IVTTDFTAKTIHRIVVDIACGNFHSALLT 286
>gi|397472457|ref|XP_003807760.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 domain-containing protein 1
[Pan paniscus]
Length = 377
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 167 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 223
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 224 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 267
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L L G K + G RHT +++ G+++
Sbjct: 268 GSQVKRTGGAEDGAPAPFIAVQPF---PALPDLPMGSDAVKASCGSRHTAVVTRTGELYT 324
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 325 WGWGKYGQLG 334
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 149 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 207
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L QG V + E+A GG HS V++
Sbjct: 208 L--------------QGLV----------MAEVAAGGWHSVCVSE 228
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR----------- 249
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 200 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAR 259
Query: 250 --IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ + A G P + Q S + +CG RH+AVVT
Sbjct: 260 EATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALPDLPMGSDAVKASCGSRHTAVVT 317
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 144 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRTFPSTTTPQIVEHLAGVPLAQISAGEA 200
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----------------- 154
H ++++ +G +Y+WG E FG G + KDS
Sbjct: 201 HSMALSMSGNIYSWGKNE----------FGQLGLGHTESKDSPSLIEALDNQKVEFLACG 250
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G SAL T+ AG K + ++E L PCLV G ++
Sbjct: 251 GSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRV 296
Query: 215 TKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
T++A G HTL +SD G+V+ +G G +GQLG G + +++P P
Sbjct: 297 TQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLP 340
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 225
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ V+ +ACGG HSA++T
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLT 258
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 32/231 (13%)
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S+D + Y S KH + + E +++ G H +++++ GE++ WG +
Sbjct: 113 SSDGKPFEYDYSMKHLRSES---ILQEKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQ 168
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
V R F S + Q + +P Q + + + S + E G
Sbjct: 169 LGVGRTFPSTTTPQ--IVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGH 226
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
SP L+ K+ +A GG H+ +L+ G ++ +G G GQLG
Sbjct: 227 TESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLG----------- 275
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTD 306
++ + RP LV + N V +IACG H+ A V+D
Sbjct: 276 ------HNSTQNELRPCLVAELVGNR--------VTQIACGRWHTLAYVSD 312
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 54/224 (24%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 144 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRTFPSTTTPQIVEHLAGVPLAQISAGEA 200
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----------------- 154
H ++++ +G +Y+WG E FG G + KDS
Sbjct: 201 HSMALSMSGNIYSWGKNE----------FGQLGLGHTESKDSPSLIEALDNQKVEFLACG 250
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
G SAL T+ AG K + ++E L PCLV G ++
Sbjct: 251 GSHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRV 296
Query: 215 TKVAAGGRHTLI-LSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
T++A G HTL +SD G+V+ +G G +GQLG G + +++P P
Sbjct: 297 TQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLP 340
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 178 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 225
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ V+ +ACGG HSA++T
Sbjct: 226 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLT 258
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 32/231 (13%)
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S+D + Y S KH + + E +++ G H +++++ GE++ WG +
Sbjct: 113 SSDGKPFEYDYSMKHLRSES---ILQEKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQ 168
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
V R F S + Q + +P Q + + + S + E G
Sbjct: 169 LGVGRTFPSTTTPQ--IVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGH 226
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
SP L+ K+ +A GG H+ +L+ G ++ +G G GQLG
Sbjct: 227 TESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLG----------- 275
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTD 306
++ + RP LV + N V +IACG H+ A V+D
Sbjct: 276 ------HNSTQNELRPCLVAELVGNR--------VTQIACGRWHTLAYVSD 312
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 33/215 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVNQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCLVTLNPGVKITKVAAGGR 222
+ + A ++ +G+ L +PC V G+++ +VA G
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYA 267
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 268 HTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG-Y 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L S + TP V + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC Q S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------QISTNLSNKQ----VIEVACGSYHSLVLT 168
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 108/286 (37%), Gaps = 53/286 (18%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ + S SP+ + G + V GG G +LA + +G + WG D L G
Sbjct: 76 GTTTDSS---SPVSVNVPAGTTITAVAGG-AGHSLAVTSAGTALAWG---DNAFGQLGDG 128
Query: 90 K---HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDF 143
TP +P +V + G H ++VT AG WG W +
Sbjct: 129 TTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQL---------- 178
Query: 144 GSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
GS + T +P T + + V T+ A ++ + GD T
Sbjct: 179 -GDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATD 237
Query: 202 S--PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
S P + G IT VAAGG H+L L+ G V WG G GQLG G+
Sbjct: 238 SSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTS-------- 289
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P+ V AG + V +A GGRHS VT
Sbjct: 290 ---------SSTPVAVDV-------PAGTT-VTAVAAGGRHSLAVT 318
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 87/223 (39%), Gaps = 34/223 (15%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ + G + + GGG LA + +G + WG + GQ S TP
Sbjct: 136 TPVAVDVPAGTTVTALSGGGV-HNLAVTSAGTALAWGD-NFWGQLGDGSTTRSRTPVAVN 193
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+P ++ AAG H ++VT AG WG S+G D T S+
Sbjct: 194 VPAGTTITAVAAGQGHSLAVTSAGTALAWGDN-------------SSGQL-GDGTATDSS 239
Query: 160 LPTEQAPPSDKRAGEEVVKRRK--------TSSA------REESENPASGDEFFTLSPCL 205
+P +D AG + TS S G + +P
Sbjct: 240 IPVA----ADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVA 295
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
V + G +T VAAGGRH+L ++ G V WG GQLG GS
Sbjct: 296 VDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGS 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 88/241 (36%), Gaps = 30/241 (12%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ 83
WG L S +S +P+ + G + V G G +LA + +G + WG + GQ
Sbjct: 174 FWGQLGDGSTTRS--RTPVAVNVPAGTTITAVAAG-QGHSLAVTSAGTALAWGD-NSSGQ 229
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
+ P +P ++ AAG H +++T G+V WG
Sbjct: 230 LGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGAN------------ 277
Query: 144 GSAGSFQ-KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF---- 198
GS Q D T S+ P P+ R + + + A GD
Sbjct: 278 ---GSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQL 334
Query: 199 ------FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+ +P V + G IT VA G H+L ++ WG GQLG GS
Sbjct: 335 GDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSS 394
Query: 253 V 253
+
Sbjct: 395 I 395
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 84/206 (40%), Gaps = 23/206 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
G ++A + +WG +D GQ L G + P P L T ++ G H
Sbjct: 26 GASHSVALLSGNIVCSWGRGED-GQ--LGHGDAEDRPTPTQLSTLDGLDIISITCGADHT 82
Query: 117 VSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
S +E+ EVY+WGW DFG G F +L Q D
Sbjct: 83 TSYSESRMEVYSWGWG----------DFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGD 132
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ S R ++ G +L P + GV I VAAG HT +++
Sbjct: 133 SHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTE 192
Query: 230 MGQVWGWGYGGEGQLGLGSRI-KMVP 254
G+++GWG+G G LGLG R ++VP
Sbjct: 193 DGELYGWGWGRYGNLGLGDRNDRLVP 218
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 114/305 (37%), Gaps = 66/305 (21%)
Query: 22 VYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWG 76
VY WG+ S + +P P + + + CG LA + G++ +WG
Sbjct: 92 VYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIA---CGDSHCLAVTMDGEVQSWG 148
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+ GQ L + + P+ S+ AAG H +VTE GE+Y WGW
Sbjct: 149 R-NQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGR---- 203
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE--------- 187
+G+ G ++ +P + + + + R T S
Sbjct: 204 ------YGNLGLGDRN----DRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGW 253
Query: 188 -ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
+ GD L+P V I+ ++ G RHT+ L+ G ++GWG+ GQ+G+
Sbjct: 254 SKYGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGV 313
Query: 247 GSRIK-----MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
G I V PH E A S + +I+CG RH+
Sbjct: 314 GDNIDHCSPVQVKFPH-----EQAHS-----------------------LVQISCGWRHT 345
Query: 302 AVVTD 306
+T+
Sbjct: 346 LAITE 350
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 106/280 (37%), Gaps = 58/280 (20%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSES---GKLITWGSADDEGQSYLTSGKHGE--TP 95
P P +L D D+ CG TS S ++ +WG D L G + TP
Sbjct: 59 PTPTQLSTLDG-LDIISITCGADHTTSYSESRMEVYSWGWGD---FGRLGHGNSSDLFTP 114
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+P + + A G +HC++VT GEV +WG + T +DS
Sbjct: 115 QPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT---------TEDSLV 165
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCL 205
Q + AG E T++ E+ E N GD L P
Sbjct: 166 PQKIQAFQGVSIKMVAAGAE-----HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEK 220
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
V+L G K+ VA G RHT+ +S G ++ +G+ GQLG G + TPH + L
Sbjct: 221 VSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKVEALR-- 277
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
SY+ I+ G RH+ +T
Sbjct: 278 ----------------------DSYISMISGGWRHTMALT 295
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 94/273 (34%), Gaps = 66/273 (24%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGG 59
++M + E + E E + WG Y +++ L P L GD V
Sbjct: 177 IKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVA--- 233
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ ++ S SG L T+G + GQ + TP ++ + + GW H +
Sbjct: 234 CGWRHTISVSSSGGLYTYGWSK-YGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTM 292
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++T G +Y WGW + FG G
Sbjct: 293 ALTSDGNLYGWGWNK----------FGQVG------------------------------ 312
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTL--NPGVKITKVAAGGRHTLILSDMGQVWG 235
GD SP V + +++ G RHTL +++ V+
Sbjct: 313 ----------------VGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFS 356
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
WG G GQLG G + P +I L SG
Sbjct: 357 WGRGTNGQLGHGESMDR-NLPKIIEVLSADGSG 388
>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
Length = 1800
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 106/269 (39%), Gaps = 69/269 (25%)
Query: 52 WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
WK V CGF L TSE K+ + G + GQ + + P P ++ +V+
Sbjct: 72 WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQTGQLGIENVVDSAVPLPVDTLSKFNVI 129
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG ++TEAG++Y WG + +G G+ K + S PT P
Sbjct: 130 KIKAGNNVSAAITEAGDLYCWG----------SSAYGQLGN-GKMNAKLHSFTPTTILNP 178
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
A E ++P + ++ T + G +HT+ +
Sbjct: 179 LIPDA---------------EKDDP---------------IYQNLQYTNICFGAQHTIAI 208
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTP-HLIPCLEHAASGKDRPLLVRQGSVNSSG- 284
S G ++ WG GQLGLG K+VP P HL D R G +NS G
Sbjct: 209 STTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHL-----------DNSFERRAGHINSLGE 257
Query: 285 --------KAGRSYVKEIACGGRHSAVVT 305
K V +IACG HSA++T
Sbjct: 258 IVTTDFTAKTIHRIVVDIACGNFHSALLT 286
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 49/223 (21%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 111 GSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 166
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q P+ +R
Sbjct: 167 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVNQ---------PTPRRVT 204
Query: 174 EEVVKRRKTSSAREESENPASGD--EFFTL-----------------SPCLVTLNPGVKI 214
+ + + A + A D E + +PC V G+++
Sbjct: 205 GCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRV 264
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
+VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 265 QRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 307
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + PTP +
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PTPRRV 203
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 264 VQRVACGYAHTLVLTD 279
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + P P R+ G K V CG +A +SG++ WG
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGY- 236
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 237 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 146 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPTPRR 202
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V ++GEVY WG+
Sbjct: 203 VTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYN 237
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 86 GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 140
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 141 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 173
>gi|302783358|ref|XP_002973452.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
gi|300159205|gb|EFJ25826.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
Length = 437
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 118/303 (38%), Gaps = 62/303 (20%)
Query: 56 CGGGCGFALATSESG----KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
CG C A+A S G ++ WG L SG + V++ A
Sbjct: 105 CGANCTAAIADSRDGTCRGRMWIWGQNQGSNSPRLFSG---------AFSSSTVVIQVAC 155
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G AH +++E G + TWG+ E + G G+ S K P E
Sbjct: 156 GGAHAAALSEHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVV 215
Query: 172 AGE----------EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE +V SS + + SG++ + P V GV + +++AGG
Sbjct: 216 CGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNK--EVLPRRVVTLEGVDVVQISAGG 273
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSR-------------IKMVPTPHLIPCLEHAASG 268
H+ +S G ++ WG GQLGLG R + +P +IP +A+
Sbjct: 274 VHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGSSDIDFFFQRIPVL-VIPSGARSATC 332
Query: 269 KDRPLLVRQGS-------VNSSGKA--GRSY-----------VKEIAC---GGRHSAVVT 305
D LVR + NS G+A G++Y V EI C GG HSAV+T
Sbjct: 333 GDLHTLVRMANGRLLGCGYNSYGQADSGKAYYAWYPSPIDWCVGEITCLAAGGGHSAVLT 392
Query: 306 DMS 308
S
Sbjct: 393 QAS 395
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 26/187 (13%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPL---PTEASVVKAAAGWAHCVSVTEAGEVYTW 128
L WG + GQ+ S H P P + P+ ++ + G H ++ G ++TW
Sbjct: 12 LYAWGY-NQCGQAGQESAIHNAVPHPIRVAIHPSSLRLIAISCGLEHTAAIASDGSLFTW 70
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G + FG G D + S P D+ T++ +
Sbjct: 71 G----------SNQFGQLG----DGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADS 116
Query: 189 SENPASGDEFF------TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ G + + SP L + + + +VA GG H LS+ G + WGY
Sbjct: 117 RDGTCRGRMWIWGQNQGSNSPRLFSGAFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNE 176
Query: 241 EGQLGLG 247
GQLG G
Sbjct: 177 HGQLGRG 183
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 26/267 (9%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+ +K+ +P + G K + GG ++A +E+G + TWG +D G+ L +G
Sbjct: 119 GTTADKN-----VPTPVSGLSGIKAISGGLGYHSMALTENGTVWTWGK-NDNGE--LGNG 170
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ P + + V AAG + +++ G ++ WG A + G
Sbjct: 171 TTVQQNSPVLVIGLSDVTAIAAGGYYSLALKSDGTIWAWG-------ANGNGELGDGTIV 223
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
K + + S L A + + +K+ T A + GD T V +
Sbjct: 224 DKHTPVQVSGLSDVIAITAGG-SHSLAIKQDGTVWAWGINMYGTLGDGTRTNRTIPVKVR 282
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----A 265
I +A GG H+L L G VWGWG GQLGLG TP + +EH A
Sbjct: 283 NLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRT-TPEQLTGIEHVLDIA 341
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAG 287
G L + G V NSSG+ G
Sbjct: 342 GGGFHSAALKKDGRVWGWGLNSSGQIG 368
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 36/228 (15%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T + SP+L + G + GG ++LA G + WG+ G L G
Sbjct: 172 TVQQNSPVL------VIGLSDVTAIAAGGY-YSLALKSDGTIWAWGA---NGNGELGDGT 221
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+ P + + V+ AG +H +++ + G V+ WG +G+ G
Sbjct: 222 IVDKHTPVQVSGLSDVIAITAGGSHSLAIKQDGTVWAWG----------INMYGTLG--- 268
Query: 151 KDSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSAREESENP----ASGDEFFTLS 202
D T +P + +A G + + + +N G +
Sbjct: 269 -DGTRTNRTIPVKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTT 327
Query: 203 PCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P +T G++ + +A GG H+ L G+VWGWG GQ+G G+R
Sbjct: 328 PEQLT---GIEHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTR 372
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 29/125 (23%)
Query: 202 SPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
SP LV G+ +T +AAGG ++L L G +W WG G G+LG G+ + TP +
Sbjct: 177 SPVLVI---GLSDVTAIAAGGYYSLALKSDGTIWAWGANGNGELGDGTIVDK-HTPVQVS 232
Query: 261 CLEHA---ASGKDRPLLVRQ------------GSVNSSGKAGRS---------YVKEIAC 296
L +G L ++Q G++ + R+ ++K IA
Sbjct: 233 GLSDVIAITAGGSHSLAIKQDGTVWAWGINMYGTLGDGTRTNRTIPVKVRNLQHIKAIAG 292
Query: 297 GGRHS 301
GG HS
Sbjct: 293 GGHHS 297
>gi|302823907|ref|XP_002993601.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
gi|300138529|gb|EFJ05293.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
Length = 441
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 118/304 (38%), Gaps = 64/304 (21%)
Query: 56 CGGGCGFALATSESG----KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
CG C A+A S G ++ WG L SG + V++ A
Sbjct: 105 CGANCTAAIADSRDGTCRGRMWIWGQNQGSNSPRLFSG---------VFSSSTVVIQVAC 155
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G AH +++E G + TWG+ E + G G+ S K P E
Sbjct: 156 GGAHAAALSEHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVKVKQVV 215
Query: 172 AGE----------EVVKRRKTSSAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAG 220
GE +V SS + + SG+ E F P V GV + +++AG
Sbjct: 216 CGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVF---PRRVVTLEGVDVVQISAG 272
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSR-------------IKMVPTPHLIPCLEHAAS 267
G H+ +S G ++ WG GQLGLG R + +P +IP +A+
Sbjct: 273 GVHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGTSDIDFFFQRIPVL-VIPSGARSAT 331
Query: 268 GKDRPLLVRQGS-------VNSSGKA--GRSY-----------VKEIAC---GGRHSAVV 304
D LVR + NS G+A G++Y V EI C GG HSAV+
Sbjct: 332 CGDLHTLVRMANGRLLGCGYNSYGQADSGKAYYAWYPSPIDWCVGEITCLAAGGGHSAVL 391
Query: 305 TDMS 308
T S
Sbjct: 392 TQAS 395
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 26/187 (13%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPL---PTEASVVKAAAGWAHCVSVTEAGEVYTW 128
L WG + GQ+ S H P P + P+ ++ + G H ++ G ++TW
Sbjct: 12 LYAWGY-NQCGQAGQESAIHSAVPHPIRVAIHPSSLRLIAISCGLEHTAAIASDGSLFTW 70
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G + FG G D + S P D+ T++ +
Sbjct: 71 G----------SNQFGQLG----DGSETNSDRPKRVYGLRDEAVKSVACGANCTAAIADS 116
Query: 189 SENPASGDEFF------TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ G + + SP L + + + +VA GG H LS+ G + WGY
Sbjct: 117 RDGTCRGRMWIWGQNQGSNSPRLFSGVFSSSTVVIQVACGGAHAAALSEHGVLQTWGYNE 176
Query: 241 EGQLGLG 247
GQLG G
Sbjct: 177 HGQLGRG 183
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 82/200 (41%), Gaps = 37/200 (18%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHC-------VS 118
S+SGKL TWG EGQ Y G HG+ E P + ++ + C +S
Sbjct: 145 SQSGKLFTWG----EGQ-YGRLG-HGDE-ESISTPKQVVALANIPMKYVFCGGRSTIALS 197
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR-----AG 173
T +YTWG +FG G + D + LP A P KR AG
Sbjct: 198 HTAGSGLYTWG----------NNEFGQLG--RGDCGDDFTCLPESVAVPGAKRLVALDAG 245
Query: 174 EEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+S A R + GD P LV+ G + VA GG H+L L+
Sbjct: 246 ASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALT 305
Query: 229 DMGQVWGWGYGGEGQLGLGS 248
G+++ WG G GQLG GS
Sbjct: 306 KAGELFSWGRGENGQLGHGS 325
Score = 38.1 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
S N D++FT L P +I V AG H ++S G+++ WG G G+LG G
Sbjct: 112 SNNNNDDDKYFT------KLYPEERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD 165
Query: 249 RIKMVPTPHLIPCL 262
+ + TP + L
Sbjct: 166 E-ESISTPKQVVAL 178
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 104/269 (38%), Gaps = 52/269 (19%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
PA++ G K + GG +A SE+G + TWG +D G+ L +G + P +
Sbjct: 126 PAQVPGLSGIKAISGGLAYHGMALSENGTVWTWGK-NDNGE--LGNGTTIQQNSPVLVAG 182
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V AAG + +++ G V+ WG G G D T +P
Sbjct: 183 LSDVTAIAAGGYYSLALKSDGTVWAWG----------VNGSGELG----DGTTTDRHVPV 228
Query: 163 EQAPPSDKRA------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ A +D A +K+ T A + GD T V + I
Sbjct: 229 QVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRTRPVQVRNLQHIVA 288
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLV 275
VA GG H+L + G VW WG + QLGL S ++P P +P +EH
Sbjct: 289 VAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVP--VPGIEH----------- 335
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
V+EI+ GG HS +
Sbjct: 336 ---------------VREISAGGFHSVAM 349
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 24/229 (10%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T + SP+L + G + GG ++LA G + WG G L G
Sbjct: 171 TIQQNSPVL------VAGLSDVTAIAAGGY-YSLALKSDGTVWAWGV---NGSGELGDGT 220
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
+ P + V+ AAG +H +++ + G V+ WG +G+ G
Sbjct: 221 TTDRHVPVQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWG----------NNTYGTLGDGT 270
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL-N 209
+ + + Q + G + + + +N + + L+ +
Sbjct: 271 RTHRTRPVQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPV 330
Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPT 255
PG++ + +++AGG H++ + G VWGWGY GQ+G G+ + +PT
Sbjct: 331 PGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRGIPT 379
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---SGKDRP 272
K+ AG HT L G+V+ WGYG GQLG G+ TP + L H SG
Sbjct: 37 KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTW-NTRTTPVMAKNLNHVIDIHSGVRSS 95
Query: 273 LLVRQ-GSV-----NSSGKAGRSYVKEI 294
+ +RQ G+V N +G+ G + +
Sbjct: 96 MALRQDGTVWTWGANENGQLGIGTITNV 123
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 7/190 (3%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG +LA S+ G+L +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ + S DE SPC V L K+ ++ G HT +L+ G V+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 236 WGYGGEGQLG 245
+G G GQLG
Sbjct: 266 FGAGSCGQLG 275
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G I VA G H+L LSD GQ++ WG G +GQLGL + V P LI
Sbjct: 83 GQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLI 131
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 74/284 (26%), Positives = 103/284 (36%), Gaps = 76/284 (26%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ WG + GQ + S PEP + + +V + A G H V + E GEVYT G
Sbjct: 1 MLCWGYSS-FGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ G D G + EQ AG+ +V A ES
Sbjct: 60 -------------LNTKGQLGHDCEGSKP----EQI---GALAGQHIVH-----VACGES 94
Query: 190 ENPASGDEFFTLS--------------------PCLVTLNPGVKITKVAAGGRHTLILSD 229
+ A D+ S P L+ I +V+ G H L L+
Sbjct: 95 HSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAA 154
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV--- 280
GQ + WG GQLGLG +P IP + AA G L G+V
Sbjct: 155 DGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 281 --NSSGKAGRSYVKE-----------------IACGGRHSAVVT 305
NSSG+ G S ++ I+CG H+AV+T
Sbjct: 215 GKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
>gi|383847394|ref|XP_003699339.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Megachile
rotundata]
Length = 522
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+ + S +L P + G + K + G LA ++ GK+ +WG +D GQ L +G +
Sbjct: 56 ADDISNMLGPTKIEVLCGKNIKTLAVGR-DHLLALTKQGKVYSWG-CNDHGQ--LGNGCY 111
Query: 92 GETPEPF---PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGS 145
+ EP + +V A G + +++T+ GEVY+WG + E VP F S
Sbjct: 112 LSSTEPALVKIIKNNEHIVYIACGSDYSIALTKIGEVYSWGNIGYSENVPRQVQIDGFDS 171
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PC 204
+ + KR + + + S + S + + S PC
Sbjct: 172 KVT----------------SVACAKRFIIMITENGEVYSWGDNSSDQLRTRYYSNQSKPC 215
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
VT G+ I KV G H L LS G ++ WG GQLG R
Sbjct: 216 KVTALVGIVIKKVVCGSSHVLALSSTGDLYVWGKNDWGQLGTDGR 260
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 118/346 (34%), Gaps = 94/346 (27%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCL 104
Query: 118 SVTEAGEVYTWGWREC-----VPSAK-----VTRDF-------GSAGSFQKDSTGKQSAL 160
+V + G Y WG E PS V RD Q + G S +
Sbjct: 105 AVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVV 164
Query: 161 PTEQA---------PPSDKRAGEEVVKRRKTSSAR-----------------------EE 188
T + PP D + V+ + + R E
Sbjct: 165 LTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNE 224
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+GD P V + + +AAGG H+ L++ G+V+GWG G G+LG G
Sbjct: 225 YGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGD 284
Query: 249 RI---KMVPTP-HLIP---CLEHAASGKDRPLLVRQGSVNSSGKA--------------- 286
KM+P +L+P ++ + G L R G + S G+
Sbjct: 285 NDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQ 344
Query: 287 -----------------------GRSYVKEIACGGRHSAVVTDMSY 309
G+ K +ACGGRH+ + + Y
Sbjct: 345 PLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWKY 390
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 61/203 (30%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G ++ + + G LA E G L W
Sbjct: 167 REGYVWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALKEDGTLWAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G+ + Y G P +P+P + ++V AAG H ++T GEVY WG
Sbjct: 221 GNNE-----YGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRG 275
Query: 132 E---------------------CVP-------------SAKVTRD----------FGSAG 147
E +P S +TRD G G
Sbjct: 276 EHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335
Query: 148 SFQKDSTGKQSALPTEQAPPSDK 170
+K +TG+ LP PP +
Sbjct: 336 YGRKVTTGQPLELPIHIPPPEGR 358
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 104/249 (41%), Gaps = 55/249 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P SP L + A ++CG S + V CGG L E G++ T G A
Sbjct: 4 WGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-A 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AG S G+ + TE + P ++ ++ + + S A+
Sbjct: 110 -------AG-----SDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +V AGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGL 246
GQLGL
Sbjct: 216 MNNAGQLGL 224
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG R + ++F S S Q+ +P Q
Sbjct: 144 CGNWHCLALAADGQFFTWG-RNSHGQLGLGKEFPSQASPQR--VRSLEGIPLAQVVAGGA 200
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 231 GQVWGWGYGGEGQLG 245
G V+ +G G GQLG
Sbjct: 261 GGVFTFGAGSCGQLG 275
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136
>gi|393215520|gb|EJD01011.1| RCC1/BLIP-II [Fomitiporia mediterranea MF3/22]
Length = 420
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 82/213 (38%), Gaps = 59/213 (27%)
Query: 65 ATSESGKLITWGSAD-DEGQSYLTSG-KHGETPEP-FPLPTEASVVKAAAGWAHCVSVTE 121
A S+ G+L WGS +EG +SG K P P LP + V AAG H V +T
Sbjct: 115 AISDQGELRVWGSFRANEGSLGFSSGLKLQHLPTPILNLPKDEKVASVAAGDNHLVVLTT 174
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G +YTWG G+Q L G ++++RRK
Sbjct: 175 YGNIYTWG------------------------AGEQGQL------------GRKILERRK 198
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+P VTL K V AG + + + G VWGWG
Sbjct: 199 IHGT----------------TPEKVTLRLRSRKAVTVGAGNFASFAVDEKGDVWGWGLNS 242
Query: 241 EGQLGLGSRIK---MVPTPHLIPCLEHAASGKD 270
GQ+G G + +VP P LI L AA G D
Sbjct: 243 VGQVGTGYEDEDDGIVPQPRLIEELSPAALGND 275
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 17/159 (10%)
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF---GSAGSFQKDSTGKQSAL 160
A + AAG H + V E G +++ G + ++T+D G F
Sbjct: 32 AGIEAIAAGGMHTMFVDEKGTIWSCGVNDEAALGRITKDVPDPEKEGEFMDVDVLTAFPY 91
Query: 161 PTEQAPPSDKRA-----GEEV---------VKRRKTSSAREESENPASGDEFFTLSPCLV 206
P E RA G+ + ++ + A E S +SG + L ++
Sbjct: 92 PLESLVEEKFRAVKIAAGDNICAAISDQGELRVWGSFRANEGSLGFSSGLKLQHLPTPIL 151
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
L K+ VAAG H ++L+ G ++ WG G +GQLG
Sbjct: 152 NLPKDEKVASVAAGDNHLVVLTTYGNIYTWGAGEQGQLG 190
>gi|241651044|ref|XP_002411264.1| RCC1 and BTB domain-containing protein, putative [Ixodes
scapularis]
gi|215503894|gb|EEC13388.1| RCC1 and BTB domain-containing protein, putative [Ixodes
scapularis]
Length = 533
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 82/211 (38%), Gaps = 34/211 (16%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
LA ++SG L++WG + Q G P + V A G H +++T A
Sbjct: 86 VLAVTQSGDLLSWGH-NGYCQLGNNCNTQGLVPSSIVVTMHHQVAHVACGSHHSLALTCA 144
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD---KRAGEEVVKR 179
GEVY WG C G GS G + PT + S +R +
Sbjct: 145 GEVYAWGQNNC----------GQVGS------GSTTNQPTPRKVTSGIGGRRCIGIACGQ 188
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + E E G+ SPC VT GV V G HT+ LSD
Sbjct: 189 TSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVV---VVCGYAHTMALSD 245
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
G ++ WG GQLG G++ V +P +P
Sbjct: 246 EGVLYTWGANSYGQLGTGNKANQV-SPFRMP 275
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 17/145 (11%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G S P P ++ G + G CG ++A E+G++ WG
Sbjct: 147 VYAWGQNNCGQVGSGSTTNQPTPRKVTSGIGGRRCIGIACGQTSSMAVMENGEVFGWGY- 205
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G L G + P + VV G+AH +++++ G +YTWG
Sbjct: 206 --NGNGQLGLGNNVNQTSPCRVTNLQGVV-VVCGYAHTMALSDEGVLYTWG--------- 253
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTE 163
+G G+ K + +PTE
Sbjct: 254 -ANSYGQLGTGNKANQVSPFRMPTE 277
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 98/256 (38%), Gaps = 34/256 (13%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + V+++G GT +S I+ LCG G G L T
Sbjct: 38 NEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT 97
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
E G++ WG G S L +G + P + T V++ A G H ++++ G
Sbjct: 98 -EDGEVYAWGH---NGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDG 153
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
++Y WG+ C G GS ST Q DK + +
Sbjct: 154 DLYAWGYNNC----------GQVGS---GSTANQPTPRRVSNCLQDKMVVGIACGQTSSM 200
Query: 184 SAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+ E G+ L+PC V GV I ++A G HTL L+D G +
Sbjct: 201 AVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLL 260
Query: 234 WGWGYGGEGQLGLGSR 249
+ WG GQLG G++
Sbjct: 261 YAWGANTYGQLGTGNK 276
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 30/123 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLEH-----AA 266
K+ +VA G H++ LS G ++ WGY GQ+G GS PTP + CL+ A
Sbjct: 135 KVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ-PTPRRVSNCLQDKMVVGIA 193
Query: 267 SGKDRPL-LVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAV 303
G+ + +V G V N +G+ G + +IACG H+
Sbjct: 194 CGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLA 253
Query: 304 VTD 306
+TD
Sbjct: 254 LTD 256
>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
Length = 585
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 37/161 (22%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V A G H V++ E GE+Y WG C G AGS ++ T Q
Sbjct: 184 IVDIACGSHHSVALNEDGEIYAWGQNNC----------GQAGS----------SITTNQG 223
Query: 166 PP---SDKRAGEEVVK----RRKTSSAREESE----------NPASGDEFFTLSPCLVTL 208
P + AG++V + + T + E E G+ ++PC +
Sbjct: 224 VPRQVNSNLAGKKVAQIACGQTSTVALLENGEVYGWGYNGVGQLGIGNYVNQMTPCRIGT 283
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G I KVA G HTL L+D GQ++ WG GQLG+ ++
Sbjct: 284 LLGTVIVKVACGYVHTLALTDEGQLYVWGGNSYGQLGISNK 324
>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
[Bombus terrestris]
Length = 534
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 82/216 (37%), Gaps = 56/216 (25%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPT-----EASVVKAAAG 112
LA +E GK+ +WG HGE T P+P + +V A G
Sbjct: 89 VLALTEEGKVYSWGH-----------NSHGELGNCSTNHMIPMPVTKNLNDEFIVDIACG 137
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP--PSDK 170
H +++T G+VY WG C G G +S E P +
Sbjct: 138 SHHSLALTNEGKVYAWGENTC----------GQVG---------KSVNINENTPMKVNST 178
Query: 171 RAGEEVV--------KRRKTSSAR------EESENPASGDEFFTLSPCLVTLNPGVKITK 216
AG+ V+ T + + + G+ + PC VT+ V I K
Sbjct: 179 LAGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKK 238
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+ G H L LS+ G ++ WG GQLGLG ++ M
Sbjct: 239 IVCGYAHVLALSNKGALYVWGGNNYGQLGLGMKMNM 274
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 26/114 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T P V G I A G G H L L++ G+V+ WG+ G+LG S M
Sbjct: 58 TGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTNHM 117
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P P + ++ +IACG HS +T+
Sbjct: 118 IPMP-------------------------VTKNLNDEFIVDIACGSHHSLALTN 146
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G + I P ++ + K V CG ++ +++GK+ WG
Sbjct: 150 VYAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWG-C 208
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
+D GQ L G + +P + VV K G+AH ++++ G +Y WG
Sbjct: 209 NDVGQ--LGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALSNKGALYVWG 259
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDALSGKKIACLSYGSGPHIVLATTE-GEVFTWG---HNAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V + A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTAN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----SGDEFFTL-------SPCL 205
Q +P + + + S A + +G+ L +PC
Sbjct: 192 QP-IPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCR 250
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
+ G++I +VA G HTL+L+D GQV+ WG GQLG G++ P P ++
Sbjct: 251 IAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVV 305
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K +T+VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
++ +ACG H+ V+TD
Sbjct: 259 IQRVACGYAHTLVLTD 274
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A +G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L S + TP + + A G+AH + +T+ G+VY WG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VTEVACGSYHSLVLT 168
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 98/256 (38%), Gaps = 34/256 (13%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + V+++G GT +S I+ LCG G G L T
Sbjct: 38 NEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCT 97
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAG 123
E G++ WG G S L +G + P + T V++ A G H ++++ G
Sbjct: 98 -EDGEVYAWGH---NGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDG 153
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
++Y WG+ C G GS ST Q DK + +
Sbjct: 154 DLYAWGYNNC----------GQVGS---GSTANQPTPRRVSNCLQDKMVVGIACGQTSSM 200
Query: 184 SAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+ E G+ L+PC V GV I ++A G HTL L+D G +
Sbjct: 201 AVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLL 260
Query: 234 WGWGYGGEGQLGLGSR 249
+ WG GQLG G++
Sbjct: 261 YAWGANTYGQLGTGNK 276
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 30/123 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP-CLEH-----AA 266
K+ +VA G H++ LS G ++ WGY GQ+G GS PTP + CL+ A
Sbjct: 135 KVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ-PTPRRVSNCLQDKMVVGIA 193
Query: 267 SGKDRPL-LVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAV 303
G+ + +V G V N +G+ G + +IACG H+
Sbjct: 194 CGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLA 253
Query: 304 VTD 306
+TD
Sbjct: 254 LTD 256
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 108/295 (36%), Gaps = 77/295 (26%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GKL TWG + K P ++V+AA G HC++V +
Sbjct: 50 SLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWG---WRECVPSAKVTRDFGSAGSFQKD-----------------STGKQSALPT 162
G Y WG + +C + D G + ++D + G S + T
Sbjct: 110 GRAYAWGGNEYGQCGEEPERKDDTGK--TLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLT 167
Query: 163 EQA---------PPSD--------KRAGEEVVKRRKTSS---------------AREESE 190
+ PP D + G E VK + E
Sbjct: 168 REGHVWTWGQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYG 227
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+GD P V G+ + +AAGG H+ L+D G+V+GWG G G+LG G
Sbjct: 228 QLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 287
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
K + ++P + +G+D + +++CGG HS +T
Sbjct: 288 K---SSKMVPQKVNLLAGED--------------------IVQLSCGGTHSVALT 319
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 46/196 (23%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+ P PIP + G + D+ GG + A ++ G++ WG + + + K +
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGW-HSTALTDDGEVYGWGRGEHGRLGFGDNDKSSK 291
Query: 94 -TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ L +V+ + G H V++T+ G ++++G D G G +K
Sbjct: 292 MVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFG----------RGDHGRLGYGKKV 341
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+TG+ +PT+ PP K+ S EE+E G
Sbjct: 342 TTGQPVEVPTDIPPP-------------KSLSGTEEAE--------------------GH 368
Query: 213 KITK-VAAGGRHTLIL 227
I K VA GGRHTL +
Sbjct: 369 WIAKLVACGGRHTLAI 384
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM--- 252
D+ + P V L G I +++ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 287 DKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQP 346
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
V P IP + + SG + G K +ACGGRH+ + +
Sbjct: 347 VEVPTDIPPPK-SLSGTEEA-------------EGHWIAKLVACGGRHTLAIVE 386
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 33/225 (14%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G A+AT++ G++ +WG G S L +G HG TP
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATAD-GEVFSWGH---NGYSQLGNGTTNHGLTPALVSTNLL 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H +++T GEV+ WG+ ++G ST Q P
Sbjct: 127 GKRVIEVACGSHHTIALTTDGEVFAWGYN-------------NSGQVGSGSTANQPT-PR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE-----------NPASGDEFFTLSPCLVTLNPG 211
+ +A + + S A +S G+ +PC + G
Sbjct: 173 RVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V + +VA G HTL L+D G V+ WG GQLG G++ + +PT
Sbjct: 233 VSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALPT 277
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P R+ K V CG ++A +SG++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP SV++ A G+AH +++T+ G VY WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQ--SALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG + ALPT ++ A TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKCNQALPTLINTDKERMAEVAACHTSHTSAAKTQS 304
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N G ++ +VA G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 LTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLEHAA 266
CL++ A
Sbjct: 175 SSCLQNKA 182
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 39/218 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT+E G++ TWG S L +G P + T S V++ A G
Sbjct: 176 GSGPHVILATTE-GEIFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 231
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG + ++G ST Q +P +
Sbjct: 232 YHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTANQ-PIPRRVTGCLQNKVV 277
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC + G+ + +VA
Sbjct: 278 VNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQS---TPCRIAALQGICVQRVAC 334
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 335 GYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTP 372
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 22/172 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 243 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGY- 301
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L S + TP V + A G+AH + +T+ G+VY WG
Sbjct: 302 NGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWG--------- 352
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
A S+ + TG +S + PT A D+ TS+A+ +
Sbjct: 353 -------ANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSAAKTQ 397
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 210 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 268
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 269 TGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGIC 328
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 329 VQRVACGYAHTLVLTD 344
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI + G G H ++ + G+++ WG+ QLG G+
Sbjct: 151 GDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGT----- 205
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 206 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 238
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 107/279 (38%), Gaps = 98/279 (35%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAH 115
CG +LA S+ G+L +WG+ D GQ LT+ + P + ++++ + G H
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSD-GQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 149 CLALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE- 188
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
G+ + +VAAGG H+ LS G V+G
Sbjct: 189 -----------------------------------GIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 236 WGYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV---- 280
WG GQLGL +K++ T + I C EH A +L + G V
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKNGGVFTFG 267
Query: 281 -NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 76/315 (24%), Positives = 116/315 (36%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EGGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P R +++
Sbjct: 110 ----AGSDGQLGLTTTEDSVAVP------------------RLIQKLNQQT--------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>gi|281211994|gb|EFA86155.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 537
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 106/260 (40%), Gaps = 46/260 (17%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
E GKL++ GS +D GQ L G G TP +V AG+ H ++VT++G +
Sbjct: 181 EQGKLLSVGS-NDFGQLGLGEGMRGSSTPRVVEKLNNQELVSIGAGFDHSMAVTKSGHTF 239
Query: 127 TWGW-------RECVPSAKVTRDFGSAGSFQKDST-GKQSALPT-----EQAPPSDKRAG 173
WG+ + V +V + S + T + +PT E + G
Sbjct: 240 GWGYNVEGQIGQRIVEYKRVESAGENVDSMENSMTPDAEYNIPTLVPEMESIKVAKVYCG 299
Query: 174 EE---VVKRRKTSSA--REESENPASGDEFF--TLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ +V R A E+ GD+ P V + VK +++ G HTL
Sbjct: 300 YDCSFLVSARGNVYAMGNNETGTLGVGDDKLGRVTKPTKVAMPEKVK--QLSCGATHTLF 357
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L++ G+V+ G+G EG+LGLG P LIP +R
Sbjct: 358 LAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHENG--------IR---------- 399
Query: 287 GRSYVKEIACGGRHSAVVTD 306
V +++ GG HS V+TD
Sbjct: 400 ----VTQVSAGGAHSMVLTD 415
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
G+++T+V+AGG H+++L+D GQV+ WG G G+LG S P L+ L
Sbjct: 397 GIRVTQVSAGGAHSMVLTDEGQVYTWGCGENGKLGHNSETN-SNIPQLVKSL 447
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 59 GCGFALATSESGKLIT--WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G L +ESG++ + WGS G T+ ++ T PF V + +AG AH
Sbjct: 351 GATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHENGIRVTQVSAGGAHS 410
Query: 117 VSVTEAGEVYTWG 129
+ +T+ G+VYTWG
Sbjct: 411 MVLTDEGQVYTWG 423
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+P RL G + + G +LA + G ++ WG + GQ + TP P
Sbjct: 78 TPVPVRLPVGTTVTAIAGSDT-HSLALTSVGTVLAWG-GNSFGQLGDGTTASSRTPVPVR 135
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG +H +++T G V+ WG G G D T S+
Sbjct: 136 LPVGTTVTAIAAGTSHSLAITATGAVFAWGDNA----------VGQLG----DGTTTDSS 181
Query: 160 LPTEQAPPSDKRA-------GEEV-VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
LP P G + V + A + GD T S +T+
Sbjct: 182 LPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTGSSTPITVPQL 241
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+T VAAG H+L L+ G V+ WG GQLG GS
Sbjct: 242 PTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGS 278
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 84/218 (38%), Gaps = 28/218 (12%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P RL G + + GG G +LA + +G + WGS + GQ L G + P +
Sbjct: 183 PVPVRLPVGTTVTAIAGG-LGHSLAVASTGATLAWGS-NAFGQ--LGDGTTTGSSTPITV 238
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V AAG H +++T G VY WG FG G D + S+
Sbjct: 239 PQLPTVTAVAAGDVHSLALTSTGTVYAWGANS----------FGQLG----DGSTSDSST 284
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE----------FFTLSPCLVTLNP 210
P P+ A V + + A GD + +P V +
Sbjct: 285 PIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPG 344
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G +T VA H + ++ W EGQLG G+
Sbjct: 345 GATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGT 382
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 86/219 (39%), Gaps = 24/219 (10%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+P RL G + + G +LA + +G + WG D L G ++ P P
Sbjct: 130 TPVPVRLPVGTTVTAIAAG-TSHSLAITATGAVFAWG---DNAVGQLGDGTTTDSSLPVP 185
Query: 100 --LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
LP +V A G H ++V G WG + FG G +TG
Sbjct: 186 VRLPVGTTVTAIAGGLGHSLAVASTGATLAWG----------SNAFGQLG--DGTTTGSS 233
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPG 211
+ + Q P A +V TS+ + S G + +P V + G
Sbjct: 234 TPITVPQLPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTPIAVRVPAG 293
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
T V +G H+L L+ G WG G+GQLG G+ +
Sbjct: 294 TTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATV 332
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 67/192 (34%), Gaps = 58/192 (30%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ WG + GQ + TP P LP +V A H +++T G V WG
Sbjct: 56 TILAWGD-NSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGG 114
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
FG G D T T+S+R
Sbjct: 115 NS----------FGQLG----DGT---------------------------TASSR---- 129
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+P V L G +T +AAG H+L ++ G V+ WG GQLG G+
Sbjct: 130 -----------TPVPVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTT 178
Query: 251 -KMVPTPHLIPC 261
+P P +P
Sbjct: 179 DSSLPVPVRLPV 190
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 68/278 (24%), Positives = 105/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG K+S G+ L + PS
Sbjct: 150 LALATDGQFFTWG---------------------KNSHGQ---LGLGKEFPS-------- 177
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+TS R S G+ + +VAAGG H+ LS G V+GW
Sbjct: 178 ----QTSPQRVRSLE-------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 78/316 (24%), Positives = 119/316 (37%), Gaps = 96/316 (30%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGG-CGFALATSESGKLITWGS 77
WGY P L I A + CG S + V CGG C F L E G++ T G
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLL---EDGEVYTCG- 59
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 60 LNTKGQ--LGHEREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWG-------- 109
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
AGS G+ + TE D A ++++ +
Sbjct: 110 --------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT------------- 138
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ----------------ILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQ 182
Query: 258 L------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 183 RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 242
Query: 294 ----IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 243 KVVYISCGEEHTAVLT 258
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 33/247 (13%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGET--PEPFPLPTEASVVKAAAGWAHCVSV 119
++LA + +G ++ WG+ +D+GQ L +G + ++ P P LP ++ AA H +++
Sbjct: 167 YSLALTATGTVLAWGN-NDQGQ--LGNGTNTDSYLPVPLALPAATTITAIAAATNHGLAL 223
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T G V WG + + G+ G+ +T ALP + AG +
Sbjct: 224 TSNGTVLAWG-------SNGSGQLGN-GNTTNSNTPVTVALPAGTTITAIAAAGSHSMAL 275
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
T + ++ T+ P + G+ IT VA+G H+L L+ G+V+ WG
Sbjct: 276 TSTGTVLTWGQD--------TVLPIPIVFPAGITITAVASGNDHSLALTSTGKVFTWGAN 327
Query: 240 GEGQLGLGSRIK-MVPTPHLIP---CLEHAASGKDRPLLVRQGSVNSSGKA---GRSYVK 292
G LG G+ VP P +P + A G + L ++ S+GK GR+
Sbjct: 328 YFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSL-----ALTSTGKLLAWGRNNYG 382
Query: 293 EIACGGR 299
++ G R
Sbjct: 383 QVGNGTR 389
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 59/162 (36%), Gaps = 51/162 (31%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LPT ++ AAG H +++T G V WG T +G G+ K
Sbjct: 94 LPTGTTISDVAAGAVHSLALTSTGTVLAWG----------TNYYGVLGNGTK-------- 135
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
++N A D + P V L G +T VAA
Sbjct: 136 -----------------------------TDNSAQNDSYV---PAAVHLPAGTTVTSVAA 163
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP 260
++L L+ G V WG +GQLG G+ +P P +P
Sbjct: 164 SSTYSLALTATGTVLAWGNNDQGQLGNGTNTDSYLPVPLALP 205
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
LSP V L G I+ VAAG H+L L+ G V WG G LG G++
Sbjct: 87 LSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTK 135
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
PIP G + V G +LA + +GK+ TWG A+ G + + P P +
Sbjct: 291 PIPIVFPAGITITAVASGN-DHSLALTSTGKVFTWG-ANYFGSLGNGTFANSSVPVPASV 348
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PT+ ++ A G A +++T G++ WG
Sbjct: 349 PTDTTITAIAGGNAQSLALTSTGKLLAWG 377
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 122/306 (39%), Gaps = 48/306 (15%)
Query: 10 ENEKMEECKETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA 63
E +K+ + ++ WG+ GT+ +++ SP + G GG +
Sbjct: 459 ERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRT---SPTAVVVSG----IVKTAGGSAHS 511
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A G + TWG + GQ L +G + P LP + V+ AAG H V+++ G
Sbjct: 512 VALGAGGAVWTWGY-NAYGQ--LGNGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALSADG 568
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK----RAGEE---V 176
V WG + + G +T Q L + P D AG
Sbjct: 569 TVAAWG-------------YNAYGQLGNGTTANQ--LTPQSVPELDGVTAISAGSTHTVA 613
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+K T A + GD FT V + + +AAG HT+ + G +W W
Sbjct: 614 LKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVW 673
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGKDRPLLVRQGSV-----NSSGKAG 287
GYG +GQLGLG+ P + L H AA G L+ G V NSSG+ G
Sbjct: 674 GYGPQGQLGLGTTTNQ-SVPVQVSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLG 732
Query: 288 RSYVKE 293
+ + +
Sbjct: 733 DATIIQ 738
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G L G L WG+ + GQ L +G+ + P + VV A+AG H V+
Sbjct: 153 GVYHTLEVKSGGSLWAWGN-NPSGQ--LGNGQRTQRNAPTRVRGLNQVVSASAGAEHSVA 209
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD----KRAGE 174
VTE G V+TWG + +G G D T A+P + SD AG
Sbjct: 210 VTEDGSVWTWG----------SNAYGQLG----DGTNTLRAVPVQVPGMSDVVAVAAAGS 255
Query: 175 EVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
V + + N + GD T S + + +T +AAG HTL + G
Sbjct: 256 RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAAGLWHTLAVKKDGS 315
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
W WG GQLG G+ + + P L+ L
Sbjct: 316 AWSWGNNAYGQLGDGTTLNRL-RPVLVAGL 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 83/199 (41%), Gaps = 29/199 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A +E G + TWGS + GQ L G + P +P + VV AA + V+
Sbjct: 203 GAEHSVAVTEDGSVWTWGS-NAYGQ--LGDGTNTLRAVPVQVPGMSDVVAVAAAGSRTVA 259
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP----SDKRAGE 174
+ G V+TWG S+G D T S LP Q P ++ AG
Sbjct: 260 LKADGTVWTWG-------------INSSGEL-GDGTTTHSLLPI-QVPNLSGVTNIAAGL 304
Query: 175 -EVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ +K SA N G L P LV GV+ ++ G HT+ L
Sbjct: 305 WHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVR--ALSGGVVHTVALKW 362
Query: 230 MGQVWGWGYGGEGQLGLGS 248
G WGWGY GQLG G+
Sbjct: 363 DGTAWGWGYNSAGQLGNGT 381
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +A G + WGS + GQ L G P +P+ +VV AAG H V+
Sbjct: 607 GSTHTVALKADGTVWAWGS-NLYGQ--LGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVA 663
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GE 174
V G ++ WG +G G +T QS +P + + A G
Sbjct: 664 VKGDGTLWVWG-------------YGPQGQLGLGTTTNQS-VPVQVSGLGHAVAIAAGGY 709
Query: 175 EVVKRRKTSSAREESENPAS--GDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSD 229
V N + GD SP LV PG+ + +AAGG T +L
Sbjct: 710 HTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLV---PGLTNVIALAAGGYTTAVLKR 766
Query: 230 MGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGS------VNS 282
G VW +GY GQLG G+ + PT L+ + +SG + + +R+ + NS
Sbjct: 767 DGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNS 826
Query: 283 SGKAG 287
+G+ G
Sbjct: 827 AGQLG 831
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 82/204 (40%), Gaps = 35/204 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A G WG + GQ L +G + P + V+ AG H +
Sbjct: 352 GGVVHTVALKWDGTAWGWGY-NSAGQ--LGNGTTTNSSIPVQVAALTQAVEIDAGGYHTL 408
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGE 174
+ + G +Y WG +G+ G+ S S++P Q P S R AG
Sbjct: 409 ARRQDGTLYAWG----------DNFYGALGTGNTTS----SSVPV-QVPLSGVRWFGAGY 453
Query: 175 --EVVKRRKTSSAREES-------ENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRH 223
V +R+K + A+ + N GD T SP V ++ I K A G H
Sbjct: 454 YYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVS---GIVKTAGGSAH 510
Query: 224 TLILSDMGQVWGWGYGGEGQLGLG 247
++ L G VW WGY GQLG G
Sbjct: 511 SVALGAGGAVWTWGYNAYGQLGNG 534
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 91/225 (40%), Gaps = 31/225 (13%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G +AT++ G++ WG G S L +G HG TP
Sbjct: 80 LCGKKIVSLSYGTGPHVVIATAD-GEVYAWGH---NGYSQLGNGTTNHGLTPALVSTNLL 135
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V + A G H +++T GEVY WG + ++G ST Q
Sbjct: 136 SKRVTEVACGSHHTIALTTDGEVYAWG-------------YNNSGQVGSGSTANQPTPRR 182
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGV 212
+ +K + + + + E G+ +PC + GV
Sbjct: 183 VSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV 242
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
I +VA G HTL L+D G V+ WG GQLG G++ + +PTP
Sbjct: 243 NIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTP 287
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K V CG ++A ++G++ WG
Sbjct: 158 VYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGY- 216
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP ++V+ A G+AH +++T+ G VY WG
Sbjct: 217 NCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWG--------- 267
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S ALPT ++ TS+A+ +S
Sbjct: 268 -------ANSYGQLGTGNKSNQALPTPINTDKERIVEVAACHTSHTSAAKTQS 313
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N K +T+VA G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 125 LTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-PTPRRV 183
Query: 260 -PCLEH 264
CL++
Sbjct: 184 SSCLQN 189
>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
Length = 391
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 105/294 (35%), Gaps = 75/294 (25%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V E
Sbjct: 50 SLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE 109
Query: 123 GEVYTWG---WRECV--PSAKVTRDFGSAGSFQKDST--------------GKQSALPTE 163
G Y WG + +C K ++ G + +D T G S + TE
Sbjct: 110 GRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTE 169
Query: 164 QA---------PPSDKRAGEEVVKRRKTSSA-----------------------REESEN 191
+ PP D + V+ + + E
Sbjct: 170 EGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQ 229
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+GD SP V G+ + +AAGG H++ L+ G V+GWG G G+LG G
Sbjct: 230 LGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDD-- 287
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ ++P H +G+ V +++CGG HS T
Sbjct: 288 --KSSKMLPQKVHLLAGEP--------------------VVQVSCGGTHSVAAT 319
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 107/269 (39%), Gaps = 43/269 (15%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
RLC V GG ++ +E G + TWG G + P +
Sbjct: 154 RLC-------VAAGGT-HSVVLTEEGHVWTWGQP-------WPPGDIKQISVPVRVQGLE 198
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+V A G H +++ + GEV+ WG ++G G+ D+ + S +P +
Sbjct: 199 NVTMIAVGAFHNLALVQHGEVWAWG----------NNEYGQLGT--GDTQPRSSPVPVKG 246
Query: 165 AP---PSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFT-LSPCLVTLNPGVKIT 215
D AG A R E GD+ + + P V L G +
Sbjct: 247 LTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVV 306
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+V+ GG H++ + G+++ +G G G+LG G + P +P H S R +V
Sbjct: 307 QVSCGGTHSVAATISGRMFSFGRGDHGRLGYGGAVT-TGHPVEVPVSLHHYS---RHNIV 362
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ N S R VK +ACGGRH+ V
Sbjct: 363 SEDEANGS---TRWVVKLVACGGRHALAV 388
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 95/231 (41%), Gaps = 44/231 (19%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ T++ GKL T+G+ D G+ L + + + P +
Sbjct: 1938 EEVIQLSCGFKHSAVVTAD-GKLFTFGNGD-YGRLGLGTTTNKKVPTRVVALESHQIGYV 1995
Query: 110 AAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
A G H + V+ G V+ +G DFG G Q ++ GK LPT+
Sbjct: 1996 ACGLNHTLCVSADGTNVWAFG----------DGDFGKLG--QGNTVGKH--LPTKI---- 2037
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPG 211
K V+K K + + S + + FT P V G
Sbjct: 2038 -KALQGHVIK--KVACGTQFSVALSKYGKVFTWGQERLIGQPDTRGGSNCQPQEVASLSG 2094
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
I V G HTL+L+ G VWGWG EGQLGLG V P L+PCL
Sbjct: 2095 YFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCL 2145
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 92/236 (38%), Gaps = 49/236 (20%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ---SYLTSGKHGETPEPF 98
+P+ C S + VCG C F + + + GS GQ L S + + F
Sbjct: 1827 VPSFSC---SQQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGF 1883
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+ A+ V + H ++VTE+GEV++WG D+G G D +
Sbjct: 1884 VVTQLATSVGSDG---HTLAVTESGEVFSWG----------DGDYGKLGHGNSDRQRRPR 1930
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL----------------- 201
+ Q GEEV+ + S + S + + FT
Sbjct: 1931 QIEALQ--------GEEVI---QLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKK 1979
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
P V +I VA G HTL +S D VW +G G G+LG G+ + K +PT
Sbjct: 1980 VPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPT 2035
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 52/244 (21%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
GT +S I +P +L G + + G + ++E G++ WG G S L
Sbjct: 54 GTGDNQSTI---VPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWG---HNGYSQLG 107
Query: 88 SGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
+G + P + T V++ A G H ++++ G+VY WG+ C G
Sbjct: 108 NGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNC----------G 157
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD--EFF--- 199
GS ST Q P+ ++ + + S A ++ + A D E +
Sbjct: 158 QVGS---GSTANQ---------PTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWG 205
Query: 200 --------------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
L+PC V GV I ++A G HTL L+D G ++ WG GQLG
Sbjct: 206 YNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLG 265
Query: 246 LGSR 249
G++
Sbjct: 266 TGNK 269
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H+L LS G V+ WGY GQ+G GS PTP +
Sbjct: 115 VTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQ-PTPRKV 173
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL+ A G+ + +V G V N +G+ G
Sbjct: 174 SNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALQGVC 233
Query: 291 VKEIACGGRHSAVVTD 306
+ +IACG H+ +TD
Sbjct: 234 IMQIACGYAHTLALTD 249
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P ++ K V CG ++A ++G++ WG
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWG-Y 206
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP +++ A G+AH +++T+ G +Y+WG
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWG 257
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 96/281 (34%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLHVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ +++ A G H V+++E G+V++WG T G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLAL------------------ 215
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
SG + P V++ S G V I+CG +H+AV+T
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLT 252
>gi|320033050|gb|EFW14999.1| ran exchange factor Prp20/Pim1 [Coccidioides posadasii str.
Silveira]
Length = 580
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST- 154
P L + VV+ A G HCV++T ++YTWG + G+ +D+T
Sbjct: 170 NPLLLADKIGVVQIATGGMHCVALTHDNKIYTWGVND-------------QGALGRDTTW 216
Query: 155 -GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
GK + + + + + +E + P D F G
Sbjct: 217 EGKLKDIDDAGSDSDSDDGSDSGM------NPKEATPTPIPADYF----------PEGTI 260
Query: 214 ITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCL---EHAASG 268
+VAAG + L+D G V+GWG G EG LG + ++ TP LIP L +H A G
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSLKKIKHIACG 320
Query: 269 KDRPL-LVRQGSVNSSG-----KAGRSYVKEIACGGRH 300
+ L L +G+V + G + GR V+ G H
Sbjct: 321 DNHALALDTKGAVFAWGSGQQNQLGRRIVERTKLNGLH 358
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 102/270 (37%), Gaps = 32/270 (11%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H + +
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEVY WG+ C G GS ST Q KR +
Sbjct: 144 AADGEVYAWGYNNC----------GQVGS---GSTANQPTPRKVTNCLHIKRVVGIACGQ 190
Query: 180 RKTSSAREESENPA----------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + + E A G+ L+P V V + ++ G HTL L+D
Sbjct: 191 TSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G ++ WG GQLG G++ ++ H++
Sbjct: 251 EGLLYAWGANTYGQLGTGNKNNLLSPAHVM 280
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H+++L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 IAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQ-PTPRKV 174
Query: 260 PCLEH------AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
H A G+ + ++ G V N +G+ G
Sbjct: 175 TNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQLTPVRVAALHSVC 234
Query: 291 VKEIACGGRHSAVVTD 306
V +I CG H+ +TD
Sbjct: 235 VNQIVCGYAHTLALTD 250
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 102/293 (34%), Gaps = 73/293 (24%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GKL TWG + K P ++V+AA G HC++V +
Sbjct: 50 SLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRE----------------------CVP----SAKVTRDFGSAGSFQKDSTGK 156
G Y WG E +P S V R + G+ T +
Sbjct: 110 GRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTRE 169
Query: 157 QSALPTEQA-PPSDKRAGEEVVKRRKTSSAR-----------------------EESENP 192
Q PP D + V+ + R E
Sbjct: 170 GHVWSWGQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQL 229
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD P V G+ + +AAGG H+ L+D G+V+GWG G G+LG G K
Sbjct: 230 GTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDK- 288
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ ++P + G+D + +++CGG HS +T
Sbjct: 289 --SSKMVPQRVNLLVGED--------------------IVQVSCGGTHSVALT 319
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 83/295 (28%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G + + + G LA E G L W
Sbjct: 168 REGHVWSWGQPWPPGDIKQIS-----VPVRVQGLERVRLIAVGAF-HNLALQEDGTLWAW 221
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G+ + Y G P P+ + ++V AAG H ++T+ GEVY WG
Sbjct: 222 GNNE-----YGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRG 276
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
E G G D + K
Sbjct: 277 E----------HGRLGFGDNDKSSK----------------------------------- 291
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+ P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 292 ---------MVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKV- 341
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P +P D P ++ SG AGR K +A GGRH+ + +
Sbjct: 342 TTGQPMEVPI--------DIP---PPKNLTDSGDAGRWIAKLVASGGRHTLAIVE 385
>gi|303320911|ref|XP_003070450.1| Regulator of chromosome condensation family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110146|gb|EER28305.1| Regulator of chromosome condensation family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 580
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 42/218 (19%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST- 154
P L + VV+ A G HCV++T ++YTWG + G+ +D+T
Sbjct: 170 NPLLLADKIGVVQIATGGMHCVALTHDNKIYTWGVND-------------QGALGRDTTW 216
Query: 155 -GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
GK + + + + + +E + P D F G
Sbjct: 217 EGKLKDIDDAGSDSDSDDGSDSGM------NPKEATPTPIPADYF----------PEGTI 260
Query: 214 ITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCL---EHAASG 268
+VAAG + L+D G V+GWG G EG LG + ++ TP LIP L +H A G
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSLKKIKHIACG 320
Query: 269 KDRPL-LVRQGSVNSSG-----KAGRSYVKEIACGGRH 300
+ L L +G+V + G + GR V+ G H
Sbjct: 321 DNHALALDTKGAVFAWGSGQQNQLGRRIVERTKLNGLH 358
>gi|326481150|gb|EGE05160.1| ran exchange factor Prp20/Pim1 [Trichophyton equinum CBS 127.97]
Length = 540
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P + VV+ AAG HCV++T G V TWG + G+ +D+T +
Sbjct: 155 PEDVGVVQVAAGGMHCVALTHDGRVLTWGVND-------------QGALGRDTTWEGGLK 201
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ A K + E + D F G I +VAAG
Sbjct: 202 DIDDA----KSDTSSDSGSDSGLNPYESTPTAIPSDAF----------PEGTVIVQVAAG 247
Query: 221 GRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPLLV 275
+ L+D G V+GWG G EG +G + K+ PTP LI L+ H A G + L +
Sbjct: 248 DSSSFALTDDGLVYGWGTFRGNEGIIGFDAETKIQPTPKLISGLKKITHVACGDNHALAI 307
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 21 VVYMWGYLPGTSP----EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
+VY WG G + + P P + G K + CG ALA G +
Sbjct: 259 LVYGWGTFRGNEGIIGFDAETKIQPTPKLISG---LKKITHVACGDNHALAIDNRGAVFA 315
Query: 75 WGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WGS G+ + K +G P F LP ++ G H +V ++G+VY WG
Sbjct: 316 WGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NITHVGCGSFHSFAVHKSGKVYGWG 371
>gi|169848433|ref|XP_001830924.1| RCC1 domain-containing protein [Coprinopsis cinerea okayama7#130]
gi|116508093|gb|EAU90988.1| RCC1 domain-containing protein [Coprinopsis cinerea okayama7#130]
Length = 549
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 95/256 (37%), Gaps = 72/256 (28%)
Query: 59 GCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPF---------PLPTEASVVK 108
G F A ++ G L WG+ DDEG+S +S G+ P P + +
Sbjct: 232 GDNFGAALNDQGDLKVWGTFRDDEGKSNFSS-DVGKQLAPTSITIHGLYTPKSSSDKIAS 290
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
A G H V++T GEVY+WG G +G
Sbjct: 291 IAGGENHLVALTTQGEVYSWG-------------IGGSGQL------------------- 318
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL-NPGVKITKVAAGGRHTLIL 227
G V+ R K + L+P V L + K + AG R T +
Sbjct: 319 ----GRRVLSRHKNEA----------------LAPKRVVLGSRSRKAVLIGAGLRSTFAV 358
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQGSVN 281
G+VWGWG GQLG+G R ++V P + L +DR + +R G +
Sbjct: 359 DQAGEVWGWGLNSVGQLGIGERGEIVLQPTKLEVLSPSNLPSSVEGEQDRVVQIRGGEFH 418
Query: 282 SSGKAGRSYVKEIACG 297
+ + + V ACG
Sbjct: 419 TVFRTAQGKV--YACG 432
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 106/279 (37%), Gaps = 49/279 (17%)
Query: 8 REENEKMEECKETVVY-----MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
+ NE + K+ +VY +G L GT +S I LCG S K G
Sbjct: 34 KAANETLLVTKDDMVYGIGNNTYGCL-GTGDTQSTIYPKKIEALCG-KSVKTFAYGKGPH 91
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSV 119
LA +E GK+ +WG D + G S G TP P + + VV A G H +++
Sbjct: 92 VLALTEEGKVYSWGYNDYCELGNK---STNEGLTPTLVPSVLDDKFVVDIACGGHHSLAL 148
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T GE+Y WG S +V G + L T Q P G K
Sbjct: 149 TNKGEIYAWGHN---VSGQV---------------GCGTILSTVQPIPKLLNVGLNGKKV 190
Query: 180 RKTSSAREESENPASGDEFFT----------LSPCLVTLNP-------GVKITKVAAGGR 222
S S E ++ L C + P + I KV G
Sbjct: 191 VHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYM 250
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLIP 260
HTL LSD G ++ WG GQLGL + + +PT +P
Sbjct: 251 HTLALSDEGVLYVWGANSYGQLGLNTDSNVWIPTKLEVP 289
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 31/111 (27%)
Query: 201 LSPCLVTLNPGVK----ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PT 255
L+P LV P V + +A GG H+L L++ G+++ WG+ GQ+G G+ + V P
Sbjct: 121 LTPTLV---PSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPI 177
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P L+ +V +GK V I+CG S VTD
Sbjct: 178 PKLL-------------------NVGLNGKK----VVHISCGDSSSVAVTD 205
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 55/249 (22%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NSKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AGS G+ + TE + P ++ ++ + + S A+
Sbjct: 110 -------AGS-----DGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGL 246
GQLGL
Sbjct: 216 MNNAGQLGL 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA S+ G+L +WG+ D +T+ P + ++++ + G HC+++
Sbjct: 96 SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 155
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G+ +TWG + + ++F S S Q+ + + +P Q + +
Sbjct: 156 GQFFTWG-KNSHGQLGLGKEFPSQTSPQRVRSLE--GIPLAQVAAGGAHSFALSLSGAVF 212
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
+ DE SPC V L K+ ++ G HT +L+ G V+ +G G G
Sbjct: 213 GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272
Query: 243 QLGLGS 248
QLG GS
Sbjct: 273 QLGHGS 278
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN 135
>gi|412992371|emb|CCO20084.1| predicted protein [Bathycoccus prasinos]
Length = 851
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 106/260 (40%), Gaps = 65/260 (25%)
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
+ S +D + ++ S + + PT + V+ +AG +HC +T+ G +YTWG
Sbjct: 356 FNSFNDNDEEFVQSDDNNTSWYRTLEPT--TFVQVSAGGSHCAGLTKNGTLYTWG----- 408
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR-RKTSSAREESENPA 193
S+G TG P E A P + E + R K + +
Sbjct: 409 --------LASSGE-----TGHHHT-PIEVAIPRKVFSMAENLHRVTKVACGSNHTLAVT 454
Query: 194 SGDEFFT-------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ F+ L+ C G+ +TKVAAGG+H++ ++D G+VW
Sbjct: 455 VDGQLFSCGRGRHGQLGLGYFHDGGPLTRCDAL--RGMHVTKVAAGGQHSVCITDDGRVW 512
Query: 235 GWGYGGEGQLGLGS-RIKM-------VPTPHLIPCL-EHAASGKDRPLLVRQGSVNSSGK 285
WG +GQLGLG R VP P L+ L E S D LL
Sbjct: 513 SWGDCTKGQLGLGDLRFATSAGWHTGVPWPCLVESLCEENLSSFD--LL----------- 559
Query: 286 AGRSYVKEIACGGRHSAVVT 305
G+ V +++CG H+ VT
Sbjct: 560 DGKDSVVQVSCGKMHTMFVT 579
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 92/253 (36%), Gaps = 49/253 (19%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
L + G+L T+G + GQ L +P+ V A G H ++ TE+G
Sbjct: 131 LVVAGEGELFTFGR-NQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESG 189
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V++WGW +G+ G D + LPT R R ++
Sbjct: 190 TVFSWGWGR----------YGNLG----DGESQDRYLPTRVVGLEGIRMVSAECGWRHSA 235
Query: 184 SAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
E+ GD PC V +I+ VA G RHT+ G +
Sbjct: 236 VVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNL 295
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+GWG+ GQLGLG +S + P+LV G V
Sbjct: 296 YGWGWNKFGQLGLGD-----------------SSDRPSPVLV-------GGALAGQRVSL 331
Query: 294 IACGGRHSAVVTD 306
+ CG RH+ VT+
Sbjct: 332 VTCGWRHTVAVTE 344
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 38/207 (18%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA------SVVKAAAGWAHC 116
+LA +ESG + +WG Y G GE+ + + LPT +V A GW H
Sbjct: 182 SLAATESGTVFSWGWG-----RYGNLGD-GESQDRY-LPTRVVGLEGIRMVSAECGWRHS 234
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V+E G V+T+GW + +G G D T + +P + A R
Sbjct: 235 AVVSEDGRVFTFGWSK----------YGQLG--HGDHTDR--TVPCQVAALRHTRISSVA 280
Query: 177 VKRRKTSSAREESENPASG-DEFFTL---------SPCLVT-LNPGVKITKVAAGGRHTL 225
R T +A G ++F L SP LV G +++ V G RHT+
Sbjct: 281 GGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTV 340
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+++ G+V+ WG G GQLG G+ +
Sbjct: 341 AVTEGGRVYSWGRGVNGQLGHGAEQDL 367
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 23/207 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHC 116
G ++A G + +WG +D GQ L G+ E P+ T+A + G +
Sbjct: 21 GSSHSVAILSCGIVTSWGRGED-GQ--LGHGQADECLAPKAISTLTDAGIESVVCGAEYT 77
Query: 117 VSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSD 169
++V + G+VY+WGW DFG G F S P + D
Sbjct: 78 IAVAPSRGQVYSWGW----------GDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGD 127
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + R ++ G LSP LV G ++ VA G H+L ++
Sbjct: 128 THTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATE 187
Query: 230 MGQVWGWGYGGEGQLGLG-SRIKMVPT 255
G V+ WG+G G LG G S+ + +PT
Sbjct: 188 SGTVFSWGWGRYGNLGDGESQDRYLPT 214
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 116/303 (38%), Gaps = 63/303 (20%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + P+ PI A L + CG G L +E G++ T
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPV--PIDA-LAERRIVQIACGSGHTVVL--TEEGEVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG DD L G +G P ++ + G H +VT +G++YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGM 114
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------GEEVVKRRKTSSAR 186
+G G + TG + E R V+ K
Sbjct: 115 ----------YGKLG--HGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTW 162
Query: 187 EESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ EN SG E PC V G I +++A G HT LS+ G+V+ +G G G+
Sbjct: 163 GDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGR 222
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG S + P + L AG+ VK++ACGG H+A
Sbjct: 223 LGHNSE-RNQPVARFVDAL-----------------------AGKR-VKQVACGGFHTAA 257
Query: 304 VTD 306
VT+
Sbjct: 258 VTE 260
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 41/210 (19%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A + SG L TWG G Y G ET P E V + A G H V +
Sbjct: 100 AVTVSGDLYTWG-----GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLL 154
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
E +VYTWG +E + S D+ G Q LP P ++ G+ +V+
Sbjct: 155 ENKDVYTWGDKE------------NGVSGHGDTEGHQY-LPC----PVEELRGKSIVQIS 197
Query: 181 ----KTSSAREESENPASGD-EFFTL-------SPC--LVTLNPGVKITKVAAGGRHTLI 226
T++ E E G+ +F L P V G ++ +VA GG HT
Sbjct: 198 ACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAA 257
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
+++ G+V+ WG G GQLG G ++ K VPT
Sbjct: 258 VTETGEVYTWGGGEHGQLGHGDKVNKTVPT 287
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ + A G K V GG A A +E+G++ TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVARFVDA--LAGKRVKQVACGGFHTA-AVTETGEVYTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P E V++ GW+H V++T+ GEVYTWG
Sbjct: 276 GHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWG 320
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 16/117 (13%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF-ALATSESGKLITWG 76
VY WG + G + P P G S + CGF A SE G++ T+G
Sbjct: 159 VYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISA--CGFHTAALSEFGEVFTFG 216
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
EG+ + G + E +P +A V + A G H +VTE GEVYTWG
Sbjct: 217 ----EGK-FGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWG 268
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 113/296 (38%), Gaps = 44/296 (14%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + + G +LA + +G ++ WG + GQ + TP
Sbjct: 131 TPVDVDLPAGTTITAIAAGAF-HSLALTSAGTVLAWGE-NLHGQLGNGGTTNMSTPVGVS 188
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP ++ AAG H ++VT G V WG G+ G+ ST
Sbjct: 189 LPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNS-------NGQLGN-GTTTGSSTPVDVD 240
Query: 160 LP---TEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGV 212
LP T A + + T +A N +GD +P V L GV
Sbjct: 241 LPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGV 300
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIP---CLEHAASG 268
IT VAAGG H+L L+ G V WG GQLG G+ P +P + A+G
Sbjct: 301 TITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAG 360
Query: 269 KDRPL-LVRQGSV-----NSSGKAGRS-----------------YVKEIACGGRHS 301
D L L G+V N SG+ G + +A GG+HS
Sbjct: 361 FDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHS 416
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + +G + WG+ + +GQ + TP LP ++ AAG H +++T A
Sbjct: 260 SLALTSTGAALAWGN-NADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAA 318
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V WG V+ G+ G+ ST LPT A + AG + T
Sbjct: 319 GAVVAWGR-------NVSGQLGN-GTTTGSSTPVDVDLPTG-ATINAIAAGFDFGLALTT 369
Query: 183 SSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ A R S +GD +P V L GV IT VAAGG+H++ L
Sbjct: 370 AGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMAL 419
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 101/266 (37%), Gaps = 27/266 (10%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + V GG +LA + +G ++ WG + GQ + TP
Sbjct: 79 TPVDVYLPAGTTITAVTAGGL-HSLALTSTGAVLAWGR-NFSGQLGNGDTTNRSTPVDVD 136
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP ++ AAG H +++T AG V WG + G+ G+ ST +
Sbjct: 137 LPAGTTITAIAAGAFHSLALTSAGTVLAWG-------ENLHGQLGNGGTTNM-STPVGVS 188
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKIT 215
LP + + T + +N +G + +P V L G IT
Sbjct: 189 LPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTIT 248
Query: 216 KVAAGGR---HTLILSDMGQVWGWGYGGEGQLGLGSRIKM-----VPTPHLIPCLEHAAS 267
VAAG H+L L+ G WG +GQLG G V P + AA
Sbjct: 249 AVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAG 308
Query: 268 GKDRPLLVRQGSV-----NSSGKAGR 288
G L G+V N SG+ G
Sbjct: 309 GLHSLALTAAGAVVAWGRNVSGQLGN 334
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 85/206 (41%), Gaps = 19/206 (9%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + +G ++ WG + EGQ S TP LPT V AAG H +++T AG
Sbjct: 100 LALTSAGTVLAWGR-NIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAG 158
Query: 124 EVYTWGWRECVPSAKVTRDFGSA--GSFQKDSTGKQSALP---TEQAPPSDKRAGEEVVK 178
+ WG FG GS ST +LP T A + + +
Sbjct: 159 TILAWG----------DNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTS 208
Query: 179 RRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
T ++ GD T +P VTL PGV +T VA G H+L+L+ W
Sbjct: 209 TGPTLLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAW 268
Query: 237 GYGGEGQLGLGSRIK-MVPTPHLIPC 261
G GQLG G+ +VP +P
Sbjct: 269 GGNSFGQLGNGTTTDSLVPIAVALPT 294
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 77/195 (39%), Gaps = 14/195 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + +G ++ WG + GQ S TP LP +V AAG H +
Sbjct: 147 GADHSLALTSAGTILAWGD-NTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLV 205
Query: 119 VTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+T G + TWG K TR G+ T LP S + +
Sbjct: 206 LTSTGPTLLTWG--------KNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSL 257
Query: 178 KRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+A N +G +L P V L G + T +AAG H+ L+ G
Sbjct: 258 VLTSDDTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAA 317
Query: 234 WGWGYGGEGQLGLGS 248
+ WG+ G GQLG GS
Sbjct: 318 FAWGHNGRGQLGNGS 332
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 103/277 (37%), Gaps = 57/277 (20%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTEAGEVY 126
S ++ WG +D GQ L +G ++ EP LP +V A G H +++T AG V
Sbjct: 53 SDTILAWGE-NDGGQ--LGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSAGTVL 109
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
WG R+ G ST S+ P + P+ RA + +
Sbjct: 110 AWG-----------RNI--EGQLGNGST-TSSSTPVAVSLPTGTRAVAVAAGADHSLALT 155
Query: 187 EESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMG-QVWG 235
A GD F +P V+L G + +AAG H L+L+ G +
Sbjct: 156 SAGTILAWGDNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLT 215
Query: 236 WGYGGEGQLGLGSRI-KMVPTPHLIP---CLEHAASGKDRPLLVRQGSV------NSSGK 285
WG GQLG G+ + P +P + A G+D L++ NS G+
Sbjct: 216 WGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQ 275
Query: 286 AGRSYVKE-----------------IACGGRHSAVVT 305
G + IA G HSA +T
Sbjct: 276 LGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALT 312
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 83/224 (37%), Gaps = 34/224 (15%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEP 97
+P+ L G + + G + TS L+TWG + GQ T+G+ +TP
Sbjct: 181 TPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGK-NTRGQLGDGTTTGR--DTPVA 237
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
LP +V A G H + +T WG FG G + T
Sbjct: 238 VTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNS----------FGQLG----NGTTTD 283
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----------SGDEFFTLSPCLVT 207
S +P A P+ A R +++ E A +G + P V+
Sbjct: 284 SLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVS 343
Query: 208 LNPGVKITKVAAGGR---HTLILSDMGQVWGWGYGGEGQLGLGS 248
L ++T +A GR H + ++ G WG G+LG GS
Sbjct: 344 LPADTRLTAIA--GRDSDHNVTITSAGAALAWGANANGELGDGS 385
>gi|326470311|gb|EGD94320.1| ran exchange factor Prp20/Pim1 [Trichophyton tonsurans CBS 112818]
Length = 565
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P + VV+ AAG HCV++T G V TWG + G+ +D+T +
Sbjct: 180 PEDVGVVQVAAGGMHCVALTHDGRVLTWGVND-------------QGALGRDTTWEGGLK 226
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ A K + E + D F G I +VAAG
Sbjct: 227 DIDDA----KSDTSSDSGSDSGLNPYESTPTAIPSDAF----------PEGTVIVQVAAG 272
Query: 221 GRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPLLV 275
+ L+D G V+GWG G EG +G + K+ PTP LI L+ H A G + L +
Sbjct: 273 DSSSFALTDDGLVYGWGTFRGNEGIIGFDAETKIQPTPKLISGLKKITHVACGDNHALAI 332
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 94/261 (36%), Gaps = 49/261 (18%)
Query: 21 VVYMWGYLPGTSP----EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
+VY WG G + + P P + G K + CG ALA G +
Sbjct: 284 LVYGWGTFRGNEGIIGFDAETKIQPTPKLISG---LKKITHVACGDNHALAIDNRGAVFA 340
Query: 75 WGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
WGS G+ + K +G P F LP ++ G H +V ++G+VY WG
Sbjct: 341 WGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NITHVGCGSFHSFAVHKSGKVYGWGLN 398
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ Q+ + ++ + PT DK + T + +
Sbjct: 399 SYCETG-----------IQQGAGDDEAVILHPTVVDSLKDKNVVQICGGSHHTLARTTDG 447
Query: 190 --------ENPASGDEFFTLSPCLV--------------TLNPGVKITKVAAGGRHTLIL 227
+ SG + TLS V T PG K VAAG H++ +
Sbjct: 448 DCLVWGRLDGFQSGLKVDTLSDSAVIKDDRNRARVLFEPTAVPGFKAEYVAAGADHSIAI 507
Query: 228 SDMGQVWGWGYGGEGQLGLGS 248
+ G+ W WG+ Q G G+
Sbjct: 508 DNEGRAWTWGFSANYQTGQGT 528
>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 864
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 98/237 (41%), Gaps = 39/237 (16%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ---SYLTSGKHGE----- 93
+P + G S K + GG ++LA GK+ WG A++ GQ YL +GK G
Sbjct: 105 LPVNVLGLPSIKAISAGG-SYSLAVGADGKVWAWG-ANNSGQLGTGYLGNGKSGSEYADF 162
Query: 94 --TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
TP +P A+ V + G H +++ + G+++ WG +G G
Sbjct: 163 QVTPVSIVIPGGAAAV--SGGLNHSLALAKDGKLWAWG----------ANTYGQLG---- 206
Query: 152 DSTGKQSALPTEQAPPSDKRA------GEEVVKR--RKTSSAREESENPASGDEFFTLSP 203
D T P P A + R R + R S +G L+P
Sbjct: 207 DGTTANRLAPVSVNIPGGAIAIAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQLTP 266
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
+V PG I VA GG H+L++ G VW WG GQLG GS V +P +P
Sbjct: 267 VVVAF-PGSAIA-VAGGGSHSLVVLSNGTVWSWGANNAGQLGDGSNATRV-SPIQVP 320
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 95/227 (41%), Gaps = 22/227 (9%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA ++ GKL WG A+ GQ L G P + + AAGW H +
Sbjct: 180 GGLNHSLALAKDGKLWAWG-ANTYGQ--LGDGTTANRLAPVSVNIPGGAIAIAAGWYHSL 236
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG S +V G+ G+ + T A P + + VV
Sbjct: 237 AIARDGRVWAWGRNN---SGQV----GNGGTANQ-LTPVVVAFPGSAIAVAGGGSHSLVV 288
Query: 178 KRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKI-TKVAAGGRHTLILSDMGQVW 234
T S + G +SP V PG+ + TKVAAGG +L ++ G VW
Sbjct: 289 LSNGTVWSWGANNAGQLGDGSNATRVSPIQV---PGIGVATKVAAGGYFSLAITSDG-VW 344
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQG 278
WG GQLG GS + P I +A + G L++R G
Sbjct: 345 SWGQNTRGQLGNGS-LANSSVPVFITATSNALALSGGYHHSLILRPG 390
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 27/139 (19%)
Query: 191 NPASGDEF--FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
N SG E+ F ++P + + PG V+ G H+L L+ G++W WG GQLG G+
Sbjct: 152 NGKSGSEYADFQVTPVSIVI-PG-GAAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDGT 209
Query: 249 RI-KMVPTPHLIP--CLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE------- 293
++ P IP + AA + R G V N+SG+ G
Sbjct: 210 TANRLAPVSVNIPGGAIAIAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQLTPVVV 269
Query: 294 --------IACGGRHSAVV 304
+A GG HS VV
Sbjct: 270 AFPGSAIAVAGGGSHSLVV 288
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHL-IPCLEHAASGKDRPLL 274
V+AG H+L+L G V WG GQLG GS + + +P L +P ++ ++G L
Sbjct: 68 VSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPVNVLGLPSIKAISAGGSYSLA 127
Query: 275 V-RQGSV-----NSSGKAGRSYV 291
V G V N+SG+ G Y+
Sbjct: 128 VGADGKVWAWGANNSGQLGTGYL 150
>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
Length = 646
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 96/243 (39%), Gaps = 63/243 (25%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEA----SVVKAAA 111
G ++ S G+L T+G T+G+ G E P+ P P + S+V AA
Sbjct: 201 GSQHSMIVSNYGELYTFGCG--------TTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAA 252
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT----EQAPP 167
G H V G++Y+WGW +G G + + K LPT +
Sbjct: 253 GVMHSSCVDSNGKIYSWGWNR----------YGQLG----NGSVKSQTLPTPPKFQNPKL 298
Query: 168 SD-----------KRAGEEVVKRRKTSSAREESENPA-----------SGDEFFTLSPCL 205
SD K +VV + + A S +G+ L P
Sbjct: 299 SDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVK 358
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG------SRIKMVPTPHLI 259
+ N + +A+G H+L L+D G+ + WGY +G LGLG ++ K++P H+
Sbjct: 359 IEFNE--HVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIR 416
Query: 260 PCL 262
C
Sbjct: 417 HCF 419
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 92/234 (39%), Gaps = 58/234 (24%)
Query: 28 LPGTSPEKSPILSPIPA-----RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
LP ++P LS I L + K VCG LA S SG+++ +G + G
Sbjct: 287 LPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKN--HTLALSSSGEVVGFG-FNACG 343
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR----------- 131
Q L +G H + P + V+ A+G+ H + +T+ GE Y+WG+
Sbjct: 344 Q--LGNGNHMDQLYPVKIEFNEHVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVY 401
Query: 132 ------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
+ +P + F + + G+Q D+ +E + + K +
Sbjct: 402 THQTKPKLIPLVHIRHCFTDSNDAFNEIYGRQ-----------DENTTQETIDQHKLYLS 450
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
++ S G + ++AG ++ I++ G+++ +G+G
Sbjct: 451 KKYS--------------------VGDTVDMISAGAWNSAIITSSGKLFCFGFG 484
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 96/281 (34%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ +++ A G H V+++E G+V++WG T G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
SG + P V++ S G V I+CG +H+AV+T
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLT 252
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ A + G ++ +G+ +GQ + + P+ L + VVK AAG H +
Sbjct: 51 CGYEHTFALTSDGDVLGFGNGV-KGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSL 109
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP------TEQAPPSDKR 171
++TE+G++Y +G ++ G +F Q P T+ A D
Sbjct: 110 ALTESGDLYAFG-------DNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHT 162
Query: 172 A-----GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
A GE + A + + G +P LVT G + ++ G +HT+
Sbjct: 163 AVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVA 222
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+ G V+ WG G GQLG G TP L+ C +PL +
Sbjct: 223 LTAAGGVYCWGENGRGQLGTGDTQNRY-TPSLV-C---------KPLSAFK--------- 262
Query: 287 GRSYVKEIACGGRHSAVVTD 306
+ACGG+H+ VTD
Sbjct: 263 ----CIHVACGGQHTIAVTD 278
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 59 GCGFALATSESGKLITWGS--ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G +LA +ESG L +G + G + + K +TP+ P A + + A G H
Sbjct: 104 GLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKE-QTPQKVPPLGRAKITQLACGQDHT 162
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+T +GE++ +G RD G+ G + G Q K G+ V
Sbjct: 163 AVLTSSGELFMFGN---------NRD-GALGVAGHANEGPPIVASAPQLVTGLK--GKHV 210
Query: 177 VK----RRKTSSAREES------EN----PASGDEFFTLSPCLVTLNP--GVKITKVAAG 220
V+ + T + EN +GD +P LV P K VA G
Sbjct: 211 VQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVC-KPLSAFKCIHVACG 269
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G+HT+ ++D V+G+G GQLGLG R +VP P I
Sbjct: 270 GQHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTRI 308
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 33/138 (23%)
Query: 200 TLSPCLVT--LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------R 249
+ PC V L P +I +V G HT L+ G V G+G G +GQLG+G+ R
Sbjct: 30 SFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQR 89
Query: 250 IKMVPTPHLIPC---LEHAASGKDRPLLVRQGSVNSSGK-------------------AG 287
+ ++ ++ LEH+ + + L G N SG+ G
Sbjct: 90 VHLLSGKGVVKMAAGLEHSLALTESGDLYAFGD-NLSGQLGLGHNFTAKEQTPQKVPPLG 148
Query: 288 RSYVKEIACGGRHSAVVT 305
R+ + ++ACG H+AV+T
Sbjct: 149 RAKITQLACGQDHTAVLT 166
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 29/131 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL---- 258
P +V ++I +VA GG+H+L LS+ G+++ WG GQLG+GS K P P
Sbjct: 130 PRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-TKNQPKPQELTSL 188
Query: 259 --IPCLEHAASGKDRPLLVRQGSV-----NSSGKAG------RSY-----------VKEI 294
IP + A G +L + G+V N+ G+ G R Y V I
Sbjct: 189 TGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHI 248
Query: 295 ACGGRHSAVVT 305
+CG H+AV+T
Sbjct: 249 SCGEEHTAVLT 259
Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P ++T I +V+ G H L+++D QV+ WGY GQLG L
Sbjct: 75 PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG--------------HTL 120
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
E + RP +V++ S + ++ACGG+HS +++
Sbjct: 121 EAGGNNSRRPRMVKELS--------SLQIVQVACGGKHSLALSN 156
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 96/281 (34%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ +++ A G H V+++E G+V++WG T G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
SG + P V++ S G V I+CG +H+AV+T
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLT 252
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 119/306 (38%), Gaps = 75/306 (24%)
Query: 25 WGY----LPG--TSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
WGY PG +S + + P S K+V CGG L E G++ T GS
Sbjct: 4 WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLL--EDGEVYTCGS 61
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 62 -NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWG-------- 110
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
GS G +T A+P K+ ++++ + S A+ +
Sbjct: 111 -----AGSDGQLGHTTTEDSVAIPR-----LIKKLNQQMI--LQVSCGNWHCMALAADGQ 158
Query: 198 FFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRN 218
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
GQLGL T PC LL Q V I+CG
Sbjct: 219 NAGQLGLSDE-----TDRQSPC--------HVKLLRTQKVV------------YISCGEE 253
Query: 300 HSAVVT 305
H+AV+T
Sbjct: 254 HTAVLT 259
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 5/195 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D + T+ P + +++ +
Sbjct: 85 QHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVS 144
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + ++F S S Q+ +P Q
Sbjct: 145 CGNWHCMALAADGQFFTWGQNRH-GQLGLGKEFPSQASPQR--VKSLEGIPLAQVAAGGA 201
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + R + DE SPC V L K+ ++ G HT +L+
Sbjct: 202 HSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKS 261
Query: 231 GQVWGWGYGGEGQLG 245
G V+ +G G GQLG
Sbjct: 262 GGVFTFGAGSFGQLG 276
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 74/277 (26%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG L + G++++ G+ +D GQ L K + P E +V++A++G H
Sbjct: 50 ACGLQHTLFVKKDGRVLSCGN-NDYGQ--LGHEKPCKRPALIDSLGERNVLQASSGTKHS 106
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+T+AG+V+TWG E + D S S + G + A S G
Sbjct: 107 TVLTDAGQVFTWGSNEDNQLGRGQVDSAST-SIPRMVRGLADHKVVQVACGSAHTVGLTA 165
Query: 177 VKRRKTSSAREESE----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ T + + N +E P V+ G+ I +VAAG H L+L+ G
Sbjct: 166 TGQIYTWGSNNHGQLGLANKTPQNE-----PQWVSCISGLPIVRVAAGADHNLVLTISGA 220
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA-----ASGKDRPL-LVRQGSVNS--SG 284
++ WG GQLG+G + P L+ L + A G D L L R G V + +G
Sbjct: 221 LFAWGCNSFGQLGVGDD-QDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAG 279
Query: 285 KAGR--------------------SYVKEIACGGRHS 301
G+ S V +IACG +HS
Sbjct: 280 MYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHS 316
>gi|166240420|ref|XP_640165.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|165988589|gb|EAL66176.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 919
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+I +A G H+L + D+GQV+ WG G G+LGLG+ +VPTP LI + S +
Sbjct: 247 RIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNE 303
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 104/269 (38%), Gaps = 52/269 (19%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
PA++ G K + GG +A SE+G + TWG +D G+ L +G + P +
Sbjct: 126 PAQVPGLSGIKAISGGLAYHGMALSENGTVWTWGK-NDNGE--LGNGTTTQQNSPVLVAG 182
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V AAG + +++ G V+ WG G G D T + +P
Sbjct: 183 LSDVTAIAAGGYYSLALKSDGTVWAWG----------VNGSGELG----DGTTTERHVPV 228
Query: 163 EQAPPSDKRA----GEEVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITK 216
+ A +D A G + R+ + N GD T V + I
Sbjct: 229 QVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTRPVQVRNLQHIVA 288
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLV 275
VA GG H+L + G VW WG + QLGL S ++P P + +EH
Sbjct: 289 VAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVP--VTGIEH----------- 335
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
V+EI+ GG HS +
Sbjct: 336 ---------------VREISAGGFHSVAM 349
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 42/244 (17%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+ + SP+L + G + GG ++LA G + WG G L G
Sbjct: 171 TTQQNSPVL------VAGLSDVTAIAAGGY-YSLALKSDGTVWAWGV---NGSGELGDGT 220
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
E P + V+ AAG +H +++ + G V+ WG +G+ G
Sbjct: 221 TTERHVPVQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWG----------NNTYGTLGDGT 270
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRR---KTSSAREESENPAS-GD---EFFTLSP 203
+ T + P R + +V S A +++ N S GD + LS
Sbjct: 271 R----------THRTRPVQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSS 320
Query: 204 CLVTLNP----GVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+L P G++ + +++AGG H++ + G VWGWGY GQLG G+ P L
Sbjct: 321 NASSLIPVPVTGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGIPTL 380
Query: 259 IPCL 262
+
Sbjct: 381 TKAV 384
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---SGKDRP 272
K+ AG HT L G+V+ WGYG GQLG G+ TP + L H SG
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTW-NTRTTPVMAKNLNHVIDIHSGVRSS 95
Query: 273 LLVRQ 277
+ +RQ
Sbjct: 96 MALRQ 100
>gi|281350338|gb|EFB25922.1| hypothetical protein PANDA_008494 [Ailuropoda melanoleuca]
Length = 197
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 34/170 (20%)
Query: 89 GKHGET------PEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G+HG+ EP P EA + + AAG H V V+EAG++Y WGW E A
Sbjct: 6 GRHGQLGHGTLEAEPEPRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLAL 65
Query: 139 VTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
TR G + K+++G G E RR +AR E PA
Sbjct: 66 PTRSLAEDGKTVAKEASGL-------------NEGGSE--GRR---TARAEDGAPAP--- 104
Query: 198 FFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
F L P L+ L + + G RHT +++ G+++ WG+G GQLG
Sbjct: 105 FIALQPFPALLDLPQDADAVQASCGSRHTAVVTRTGELYTWGWGKYGQLG 154
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 22 PRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLALPTR 68
>gi|119179563|ref|XP_001241353.1| hypothetical protein CIMG_08516 [Coccidioides immitis RS]
gi|392866729|gb|EAS30097.2| ran exchange factor Prp20/Pim1 [Coccidioides immitis RS]
Length = 580
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 42/218 (19%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST- 154
P L VV+ A G HCV++T ++YTWG + G+ +D+T
Sbjct: 170 NPLLLADTIGVVQIATGGMHCVALTHDNKIYTWGVND-------------QGALGRDTTW 216
Query: 155 -GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
GK + + + + + +E + P D F G
Sbjct: 217 EGKLKDIDDAGSDSDSDDGSDSGM------NPKEATPTPIPADYF----------PEGTI 260
Query: 214 ITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCL---EHAASG 268
+VAAG + L+D G V+GWG G EG LG + ++ TP LIP L +H A G
Sbjct: 261 FVEVAAGDSSSFALTDDGFVYGWGTFRGNEGILGFDATTRVQTTPKLIPSLKKIKHIACG 320
Query: 269 KDRPL-LVRQGSVNSSG-----KAGRSYVKEIACGGRH 300
+ L L +G+V + G + GR V+ G H
Sbjct: 321 DNHALALDTKGAVFAWGSGQQNQLGRRIVERTKLNGLH 358
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 113/271 (41%), Gaps = 54/271 (19%)
Query: 48 GGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEAS 105
G +S DV G LA S+ GKL WGS + GQ + T+ K P+ L +A
Sbjct: 152 GTESIADVAAG-FWHTLAASKKGKLYAWGS-NKHGQLGHHDTAVKLAVEPQEILLLRDAP 209
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST------GKQSA 159
+ + A G H +++T+ GEVYTWG FG+ G ST + A
Sbjct: 210 IKQVACGSYHSMALTKDGEVYTWG-------------FGAHGRLGHGSTEDEFMPKRVEA 256
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSS-----AREESENPASGDEFFTLSPCLVTLNPGVKI 214
L E S AG E TS GD+ L+P V L+ I
Sbjct: 257 LVGENI--SSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAP--VVLDFPTSI 312
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL 274
++A G H +S G ++ WG+ G LG G + +P++I LE + D P
Sbjct: 313 RQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG-----LKSPNII--LE--PTVLDAPAQ 363
Query: 275 VRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ K++ACG +H+ VVT
Sbjct: 364 LQNS-------------KQVACGSQHTLVVT 381
>gi|428171592|gb|EKX40507.1| hypothetical protein GUITHDRAFT_96261, partial [Guillardia theta
CCMP2712]
Length = 424
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 94/234 (40%), Gaps = 64/234 (27%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTE 121
LA S SG L WG + GQ L +G + +P P ++ + +AG H ++VT
Sbjct: 190 LALSRSGILFAWG-INHMGQ--LGTGDTADRFQPTPTKNSKDLLFFQVSAGGEHSMAVTS 246
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS--TGKQSALPTEQAPPSDKRAGEEVVKR 179
G+VY WG GS+G +DS G S P +R+ E ++
Sbjct: 247 LGKVYVWG-------------SGSSGQLGQDSLDIGPNSVEP--------RRSLEAILV- 284
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
P D+F I +VAAG H++ LS G++W WG
Sbjct: 285 ------------PGLKDQF---------------IVQVAAGWLHSIALSKDGEIWIWGGN 317
Query: 240 GEGQLGLGSRI-KMVPTP-------HLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
GQLGLG ++ + P L P + AA L G V SSG+
Sbjct: 318 RHGQLGLGDKLNRFAPVKLQGKEFQMLGPVISIAAGHGHSLFLNSSGHVFSSGR 371
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 100/272 (36%), Gaps = 72/272 (26%)
Query: 7 KREENEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
K + + + +++ WG GT + + P P + + V GG
Sbjct: 183 KLTNHHTLALSRSGILFAWGINHMGQLGTG-DTADRFQPTPTKNSKDLLFFQVSAGG-EH 240
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHGETP----EPFPLP--TEASVVKAAAGWA 114
++A + GK+ WGS GQ L G + P E +P + +V+ AAGW
Sbjct: 241 SMAVTSLGKVYVWGSGSSGQLGQDSLDIGPNSVEPRRSLEAILVPGLKDQFIVQVAAGWL 300
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++++ GE++ WG G + Q DK
Sbjct: 301 HSIALSKDGEIWIWG-------------------------GNRHG----QLGLGDKLNRF 331
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
VK + G EF L P + +AAG H+L L+ G V+
Sbjct: 332 APVKLQ--------------GKEFQMLGP----------VISIAAGHGHSLFLNSSGHVF 367
Query: 235 GWGYGGEGQLGLG-----SRIKMVPTPHLIPC 261
G GQLG+G S I VP P+ I C
Sbjct: 368 SSGRNDAGQLGVGNSIDRSSISFVPIPNRIWC 399
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 89/249 (35%), Gaps = 29/249 (11%)
Query: 22 VYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
+Y WG+ E + P P G V G + T G L T+G
Sbjct: 84 IYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGR- 142
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L +P+ V A G H ++ TEAG V++WGW
Sbjct: 143 NQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGR------ 196
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-------- 190
+G+ G D + PT V R ++ +E
Sbjct: 197 ----YGNLG----DGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSK 248
Query: 191 --NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG- 247
GD PCLV +++ VA G RHT+ G ++ WG+ GQLGLG
Sbjct: 249 YGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGD 308
Query: 248 SRIKMVPTP 256
S + PTP
Sbjct: 309 SEDRAAPTP 317
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 103/265 (38%), Gaps = 52/265 (19%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
V G CG ++A + G + +WG +D GQ +P T+A V G
Sbjct: 12 VLGVSCGSSHSIALLDCGVVASWGRGED-GQLGHGQADQCTSPTCIAALTDAGVDAVVCG 70
Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
+ V+V + G++Y+WGW DFG G F S P +
Sbjct: 71 AEYTVAVASSRGQIYSWGWG----------DFGRLGHGECGDVFVPRPIAFFSGRPVARV 120
Query: 166 PPSDKRAGEEVVKRRK---TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
D VV + + R ++ G LSP LVT G +++ VA G
Sbjct: 121 ACGDTHT--LVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSE 178
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
H+L ++ G V+ WG+G G LG G S+ + PT +V V
Sbjct: 179 HSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTR-----------------VVGLDGVT 221
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTD 306
V + CG RHSAVVTD
Sbjct: 222 ---------VTSVVCGWRHSAVVTD 237
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 34/224 (15%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET--PEPFPLPTEASVVKAAAG 112
VCG A+A+S G++ +WG D L G+ G+ P P + V + A G
Sbjct: 68 VCGAEYTVAVASSR-GQIYSWGWGD---FGRLGHGECGDVFVPRPIAFFSGRPVARVACG 123
Query: 113 WAHCVSVTEA-GEVYTWG-----------WRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
H + VT+ G +YT+G +C+ VT G + G + +L
Sbjct: 124 DTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGE--RVSSVACGSEHSL 181
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+A S N GD +P V GV +T V G
Sbjct: 182 AATEAGT-------------VFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCG 228
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
RH+ +++D G+V+ +G+ GQLG G + P L+ L+H
Sbjct: 229 WRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTR-PCLVAGLQH 271
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 78/216 (36%), Gaps = 45/216 (20%)
Query: 63 ALATSESGKLITWG------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
+LA +E+G + +WG D + Q T P +V GW H
Sbjct: 180 SLAATEAGTVFSWGWGRYGNLGDGDSQDRYT-------PTRVVGLDGVTVTSVVCGWRHS 232
Query: 117 VSVTEAGEVYTWGW---------------REC-VPSAKVTRDFGSAGSFQK----DSTGK 156
VT+ G V+T+GW R C V + R AG ++ DS G
Sbjct: 233 AVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGN 292
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
A + E+ + P +G P ++
Sbjct: 293 LYAWGWNKFGQLGLGDSED-----------RAAPTPVAGFGLAGGGVEAGAATP-RRVAL 340
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+A G RHT+ +++ G+V+ WG G GQLG G+ +
Sbjct: 341 LACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQDL 376
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP------------LPTEAS 105
GG +A G L WG + GQ L + P P T
Sbjct: 279 GGWRHTMAADSEGNLYAWG-WNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRR 337
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
V A GW H V+VTEAGEVY+WG
Sbjct: 338 VALLACGWRHTVAVTEAGEVYSWG 361
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 95/224 (42%), Gaps = 20/224 (8%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TSG 89
T+P +P+ +PA G + V G +LA + +G ++ WG + GQ Y T+
Sbjct: 130 TTPRSTPVAVDLPA----GTTVTAVAAGDR-HSLAVTSTGTVLAWG-LNVTGQLYDGTTT 183
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
+ TP LP +V AAG AH +++T AG V WG A + G G+
Sbjct: 184 TNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWG-------ANSSGQLGD-GTT 235
Query: 150 QKDSTGKQSALP---TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT--LSPC 204
ST LP T + + V T A + GD T +P
Sbjct: 236 TPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPV 295
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
V L G +T VA G H+L ++ G + WG G GQLG GS
Sbjct: 296 AVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGS 339
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 74/190 (38%), Gaps = 26/190 (13%)
Query: 70 GKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
G + WG D +S L G + TP LP + ++ AAG H ++VT AG V
Sbjct: 60 GTGLAWG---DNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLA 116
Query: 128 WGWRE--------CVP-SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
WG P S V D + + + G + +L + G V
Sbjct: 117 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTG-TVLAWGLNVTG 175
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ + S +P +V L G +T VAAG H+L L+ G V WG
Sbjct: 176 QLYDGTTTTNSS-----------TPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGA 224
Query: 239 GGEGQLGLGS 248
GQLG G+
Sbjct: 225 NSSGQLGDGT 234
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 87/223 (39%), Gaps = 19/223 (8%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+ +PI+ +PA G + V G +LA + +G ++ WG A+ GQ +
Sbjct: 183 TTNSSTPIVVDLPA----GTTVTAVAAGNA-HSLALTSAGTVLAWG-ANSSGQLGDGTTT 236
Query: 91 HGETPEPFPLPT-EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
TP LP AA+ +H ++VT G + WG A T G G+
Sbjct: 237 PRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWG-------ANFTGQLGD-GTI 288
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----EESENPASGDEFFTLSPCL 205
ST LP + + T + S G + +P
Sbjct: 289 TNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVA 348
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
V L G +T VA G H+L L+ G + WG+ GQLG G+
Sbjct: 349 VDLPAGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDGT 391
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 42/111 (37%), Gaps = 25/111 (22%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P V L IT VAAG H+L ++ G V WG GQLG G+ TP P
Sbjct: 83 TPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQLGDGTT-----TPRSTPV 137
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSYPIA 312
+G + V +A G RHS VT +A
Sbjct: 138 AVDLPAG--------------------TTVTAVAAGDRHSLAVTSTGTVLA 168
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 120/282 (42%), Gaps = 52/282 (18%)
Query: 18 KETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
++ V+ WGY G P + +S +P R+ G + GG ++A ++ G +
Sbjct: 209 RDGTVWSWGYNEDGELGNRPTEDYTVS-VPVRVKGLSDVIAISAGGF-HSIALNKDGAVW 266
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
WG E +GK + P + VV AAG+ H +++ + G V+ WG
Sbjct: 267 IWGGGIIE-----KNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG---- 317
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE--- 190
+G GS + G+ S LP + + A V R S A ++
Sbjct: 318 ------HNSYGVLGS----NVGEHSFLPVQVKGLKNVVA---VAAGRLHSVALTKNGTIW 364
Query: 191 ---NPASG-----DEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
N A G + F+L+ P V V +AAGG HTL + G VW WG +
Sbjct: 365 AWGNNAFGQLGRENNSFSLNLPYKVKWLDNV--VAIAAGGSHTLAIKRDGTVWSWGANNK 422
Query: 242 GQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
GQLG G+ + +PT C++ G ++ +LV GS +S
Sbjct: 423 GQLGNGTYKSSYIPT-----CVK----GLNKAVLVEAGSQHS 455
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 103/278 (37%), Gaps = 49/278 (17%)
Query: 17 CKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
K ++ WG E + +P ++ D+ + GG LA G + +
Sbjct: 358 TKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDNVVAIAAGGS-HTLAIKRDGTVWS 416
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WG A+++GQ L +G + + P + V AG H ++V + G V+ WG+ E V
Sbjct: 417 WG-ANNKGQ--LGNGTYKSSYIPTCVKGLNKAVLVEAGSQHSLAVDKDGTVWVWGFIESV 473
Query: 135 PSAKVTRDF------------------------------------GSAGSFQKDSTGKQS 158
S K T+D G+ F+K + S
Sbjct: 474 WSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVS 533
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD-------EFFTLSPCLVTLNPG 211
++ + K + + R + + GD ++ S V +
Sbjct: 534 SVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYLNFSEKPVKIKGL 593
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ KVAAG H+L L G VW WGY GQLG G+R
Sbjct: 594 SGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTR 631
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 17/253 (6%)
Query: 18 KETVVYMWGYLPGTSPEKSP--ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
K+ V++WG++ EK+ ILSP+P ++ + ++ GG + L + G + W
Sbjct: 460 KDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGG-LDYILVLRKDGNI--W 516
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G +D T + L +V AAG+ H ++V G V++WG +
Sbjct: 517 GCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWG-DTNLD 575
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG 195
+ + +F K +G + + K+ G S +G
Sbjct: 576 NKEKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTV------WSWGYNAYGQLGNG 629
Query: 196 DEFFTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
+ P V LN + +AAG H++ L G VW WG GQLG I+
Sbjct: 630 TRETSFVPVRVKGLN---NVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGR-RNIEFST 685
Query: 255 TPHLIPCLEHAAS 267
P + L++ +
Sbjct: 686 VPLKVEKLDNVVA 698
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 103/278 (37%), Gaps = 44/278 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G LA + G + WG G L +G + ++ P + VV +AG H
Sbjct: 48 GAGSLHTLAIKDDGTVWAWGY---NGFGQLGNGTYKDSCIPVRVKGLKDVVAVSAGTFHS 104
Query: 117 VSVTEAGEVYTWGWREC-VPSAKVTRDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAG 173
+++ + G V+ WG + V RDF + + K+ + A SD
Sbjct: 105 LALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGSD---- 160
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN-PGVK-ITKVAAGGRHTLILSDMG 231
S N +L P V + G+K + V+AG H+L L G
Sbjct: 161 ---------GSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLALKRDG 211
Query: 232 QVWGWGYGGEGQLG----------LGSRIKMVPTPHLIPC--LEHAASGKDRPLLVRQGS 279
VW WGY +G+LG + R+K + I A KD + + G
Sbjct: 212 TVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGG 271
Query: 280 -VNSSGKAGRSY----------VKEIACGGRHSAVVTD 306
+ +GK SY V IA G RHS + D
Sbjct: 272 IIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKD 309
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
K+ AG HTL + D G VW WGY G GQLG G+
Sbjct: 43 KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGT 78
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 37/274 (13%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 161 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 210
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ G +YT+GW + +G G
Sbjct: 211 WIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK----------YGQLGH---- 256
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 257 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V K+ +++ G RHT+ +++ V+ WG G GQLG G + +P +I L
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDR-NSPKIIEAL 375
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
+ G P + + SGK+G S + A
Sbjct: 376 --SVDGSSGPHIESSNTDLLSGKSGASLFERYAV 407
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 30/204 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
G +A + +WG +D GQ HG+T + LPT S + A A G
Sbjct: 21 GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTHLSALDAQQIDSIACG 73
Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+ E+Y+WGW DFG G L +Q
Sbjct: 74 ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 123
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ S R ++ G +L P + GV I VAAG H++
Sbjct: 124 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSR 249
+++ G+++GWG+G G LGLG R
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDR 207
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD-MGQVWGWGYGGEGQL 244
R E GD L P ++ +I +A G HTL S+ +++ WG+G G+L
Sbjct: 39 RGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRL 98
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G G+ + LIP +P++ QG +K+IACG H V
Sbjct: 99 GHGNSSDL-----LIP----------QPIIALQGL----------RIKQIACGDSHCLAV 133
Query: 305 T 305
T
Sbjct: 134 T 134
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 96/281 (34%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 63 GEQPERIPALETLNVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 108
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ +++ A G H V+++E G+V++WG T G
Sbjct: 109 IGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWG----------TNSHG 158
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G GK+ P+ QA P R+ E
Sbjct: 159 QLG------LGKE--FPS-QASPQRVRSLE------------------------------ 179
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 180 ------GIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLAL------------------ 215
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
SG + P V++ S G V I+CG +H+AV+T
Sbjct: 216 --SGNNAP--VQRYKPVSIGALKTLGVVSISCGYKHTAVLT 252
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 90/339 (26%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AGS G+ + TE + P ++ ++ + + S A+
Sbjct: 110 -------AGS-----DGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGLGS--------RIKMVPTPHLIPCLEHAASGKDR-PLLVRQGSV-----NSS 283
GQLGL +K++ T ++ + + G++ +L + G V S
Sbjct: 216 MNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 284 GKAGR-----------------SYVKEIACGGRHSAVVT 305
G+ G S V +IACG +H+ +
Sbjct: 272 GQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 90/339 (26%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AGS G+ + TE + P ++ ++ + + S A+
Sbjct: 110 -------AGS-----DGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGLGS--------RIKMVPTPHLIPCLEHAASGKDR-PLLVRQGSV-----NSS 283
GQLGL +K++ T ++ + + G++ +L + G V S
Sbjct: 216 MNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 284 GKAGR-----------------SYVKEIACGGRHSAVVT 305
G+ G S V +IACG +H+ +
Sbjct: 272 GQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|89243623|gb|AAI13827.1| RCCD1 protein [Homo sapiens]
Length = 244
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 19/137 (13%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V V+E G++Y WGW E A TR+ G E
Sbjct: 84 AAGGW-HSVCVSETGDIYIWGWNESGQLALPTRNLAEDG---------------ETVARE 127
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
E+ + ++T A + + P + F P L+ L G K + G RHT +++
Sbjct: 128 ATELNEDGSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVT 184
Query: 229 DMGQVWGWGYGGEGQLG 245
G+++ WG+G GQLG
Sbjct: 185 RTGELYTWGWGKYGQLG 201
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 156 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGW 194
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L
Sbjct: 67 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLAE 119
Query: 261 CLEHAAS-----GKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGR 299
E A +D + R G A G VK +CG R
Sbjct: 120 DGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSR 178
Query: 300 HSAVVT 305
H+AVVT
Sbjct: 179 HTAVVT 184
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 49/246 (19%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGL 246
GQLGL
Sbjct: 219 AGQLGL 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ +P Q
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGA 200
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 231 GQVWGWGYGGEGQLG 245
G V+ +G G GQLG
Sbjct: 261 GGVFTFGAGSCGQLG 275
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 7/190 (3%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG ++A S+ G+L +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSVALSDQGQLFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ + S DE SPC V L K+ ++ G HT +L+ G V+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 236 WGYGGEGQLG 245
+G G GQLG
Sbjct: 266 FGAGSCGQLG 275
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 74/284 (26%), Positives = 103/284 (36%), Gaps = 76/284 (26%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ WG + GQ + S PEP + + +V + A G H V + E GEVYT G
Sbjct: 1 MLCWGYSS-YGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ G D G + EQ AG+ +V A ES
Sbjct: 60 -------------LNTKGQLGHDCEGSKP----EQI---GALAGQHIVH-----VACGES 94
Query: 190 ENPASGDEFFTLS--------------------PCLVTLNPGVKITKVAAGGRHTLILSD 229
+ A D+ S P L+ I +V+ G H L L+
Sbjct: 95 HSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAA 154
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV--- 280
GQ + WG GQLGLG +P IP + AA G L G+V
Sbjct: 155 DGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 281 --NSSGKAGRSYVKE-----------------IACGGRHSAVVT 305
NSSG+ G S ++ I+CG H+AV+T
Sbjct: 215 GKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 13/192 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S G L +WG+ +D + T + P ++ + + + G HC++
Sbjct: 92 GQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLA 151
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ + G+++TWG G F S+ Q E P + AG
Sbjct: 152 LGDDGQLFTWG-------QNTHGQLGLGNGFISQSS-PQKVKSLEGIPLAQVTAGGSHSF 203
Query: 179 RRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
S A + + DE +PC V K+ ++ G HT IL+ G +
Sbjct: 204 ALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGL 263
Query: 234 WGWGYGGEGQLG 245
+ +G GG GQLG
Sbjct: 264 FTFGAGGSGQLG 275
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 70/294 (23%), Positives = 112/294 (38%), Gaps = 76/294 (25%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG L E G++ + G + EGQ L G P P E + A G +H
Sbjct: 41 CGGK--HTLFLMEDGQVYSCG-WNGEGQ--LGHSHEGTHPAPVATLAEEHIKHIACGQSH 95
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++++ G +Y+WG G+ G + S +P R ++
Sbjct: 96 SLALSLQGNLYSWG-------------AGNDGQLGHATVEHYSRIP---------RIIKK 133
Query: 176 VVKRRKTSSAREESENPASGD--EFFTL------------------SPCLVTLNPGVKIT 215
+ +++ + + A GD + FT SP V G+ +
Sbjct: 134 LSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLA 193
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHA----ASGKD 270
+V AGG H+ LS G V+GWG GQLGL ++K P H+ P H + G++
Sbjct: 194 QVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPC-HVKPLRTHKVVYISCGEE 252
Query: 271 R-PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHS 301
+L + G + + G G S V +IACG +H+
Sbjct: 253 HTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHT 306
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC- 261
PC T + + +VA GG+HTL L + GQV+ G+ GEGQLG S P P
Sbjct: 25 PCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLG-HSHEGTHPAPVATLAE 83
Query: 262 --LEHAASGKDRPL-LVRQGSVNSSG 284
++H A G+ L L QG++ S G
Sbjct: 84 EHIKHIACGQSHSLALSLQGNLYSWG 109
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 49/246 (19%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGL 246
GQLGL
Sbjct: 219 AGQLGL 224
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ +P Q
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGA 200
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 231 GQVWGWGYGGEGQLG 245
G V+ +G G GQLG
Sbjct: 261 GGVFTFGAGSCGQLG 275
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 90/339 (26%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AGS G+ + TE + P ++ ++ + + S A+
Sbjct: 110 -------AGS-----DGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGLGS--------RIKMVPTPHLIPCLEHAASGKDR-PLLVRQGSV-----NSS 283
GQLGL +K++ T ++ + + G++ +L + G V S
Sbjct: 216 MNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 284 GKAGR-----------------SYVKEIACGGRHSAVVT 305
G+ G S V +IACG +H+ +
Sbjct: 272 GQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALV 310
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 49/246 (19%)
Query: 25 WGY----LPGTSPEKSPILS-PIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSA 78
WGY PG S I++ P R S K+V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 159 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGL 246
GQLGL
Sbjct: 219 AGQLGL 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 84 QHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ +P Q
Sbjct: 144 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGA 200
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 231 GQVWGWGYGGEGQLG 245
G V+ +G G GQLG
Sbjct: 261 GGVFTFGAGSCGQLG 275
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136
>gi|326680006|ref|XP_003201431.1| PREDICTED: RCC1 domain-containing protein 1 [Danio rerio]
Length = 410
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 42/198 (21%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 195 GSEHALLLTADGTLYSWGSGSHGQLGHGALTSL---EDPQAVEALWGVPIKAVAAGNWHS 251
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 252 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 280
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDM 230
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT ++
Sbjct: 281 EKRRGNGSGNDDQPMNTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSA 340
Query: 231 GQVWGWGYGGEGQLGLGS 248
G ++ WG+G GQLG G+
Sbjct: 341 GDLYTWGWGQYGQLGHGT 358
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 28/112 (25%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE------H 264
GV I VAAG H+ +S G ++ WG+ GQLGL SR LE +
Sbjct: 238 GVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSR-----------GLEEEKRRGN 286
Query: 265 AASGKDRPLLVRQGSVNS-----------SGKAGRSYVKEIACGGRHSAVVT 305
+ D+P+ + S A S + I+CG RH+A VT
Sbjct: 287 GSGNDDQPMNTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVT 338
>gi|431920246|gb|ELK18281.1| RCC1 domain-containing protein 1 [Pteropus alecto]
Length = 181
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 29/142 (20%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V V+E G++Y WGW E Q ALPT
Sbjct: 5 AAGGW-HSVCVSETGDIYIWGWNE----------------------SGQLALPTRSLVED 41
Query: 169 DKRAGEEVVKRRKTSSARE---ESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRH 223
K + ++ K S E+E+ A F ++ P L+ L G K + G RH
Sbjct: 42 KKAVAGQAIRLNKDGSEENRIVEAEDGAPA-AFISVQPFPALLDLPLGSDAVKASCGSRH 100
Query: 224 TLILSDMGQVWGWGYGGEGQLG 245
T +++ G+++ WG+G GQLG
Sbjct: 101 TAVVTRTGELYTWGWGKYGQLG 122
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + VKA+ G H VT GE+YTWGW
Sbjct: 77 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGW 115
>gi|293356015|ref|XP_218819.5| PREDICTED: RCC1 domain-containing protein 1-like [Rattus
norvegicus]
Length = 378
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 44/199 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA + +
Sbjct: 169 GAEHALLLCEAGQVFSWGG-----------GRHGQLGHGSLEAELEPRLLEALQGLRMAE 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A TR + ++++T
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELND---------- 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRHTLI 226
D GEE +A + PA F + P L+ L G K + G RHT +
Sbjct: 268 DGLRGEE--------AALADVGAPA---HFIAIQPFPALLDLPLGSDAVKASCGSRHTAV 316
Query: 227 LSDMGQVWGWGYGGEGQLG 245
++ G+++ WG+G GQLG
Sbjct: 317 VTRTGELYTWGWGKYGQLG 335
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FGSA 146
+G+H P PL V + +A W++ VT G V G C +A RD + S
Sbjct: 25 NGQHA-VHSPEPLHAADDVCQVSASWSYTALVTRGGRVELSGSVSC--AADGCRDVWASE 81
Query: 147 GSF--QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN-PASGDEFFTLS- 202
G Q++ +G + L + P GE + + S A+ + E+ P S TL
Sbjct: 82 GLLVVQRNKSGSGTEL--QAWVPGSALQGEPLWVQNLASGAKAQGEDEPGSEPRMGTLPL 139
Query: 203 -PCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P +++ ++ G H L+L + GQV+ WG G GQLG GS +
Sbjct: 140 LPCARAYMTPQPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGS-L 198
Query: 251 KMVPTPHLIPCLE 263
+ P L+ L+
Sbjct: 199 EAELEPRLLEALQ 211
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
L P L+ G+++ +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR 250
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + S G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVSCGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFSWGQNKYGQLGLGIDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|326680004|ref|XP_003201430.1| PREDICTED: RCC1 domain-containing protein 1-like [Danio rerio]
Length = 409
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 42/198 (21%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 194 GSEHALLLTADGTLYSWGSGSHGQLGHGVLTSL---EDPQAVEALWGVPIKAVAAGNWHS 250
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 251 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 279
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDM 230
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT ++
Sbjct: 280 EKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSA 339
Query: 231 GQVWGWGYGGEGQLGLGS 248
G ++ WG+G GQLG G+
Sbjct: 340 GDLYTWGWGQYGQLGHGT 357
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 42/119 (35%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE------H 264
GV I VAAG H+ +S G ++ WG+ GQLGL SR LE +
Sbjct: 237 GVPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSR-----------GLEEEKRRGN 285
Query: 265 AASGKDRPLLVRQGSVNSSGK------------------AGRSYVKEIACGGRHSAVVT 305
+ D+P +N+ GK A S + I+CG RH+A VT
Sbjct: 286 GSGNDDQP-------INTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVT 337
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 100/246 (40%), Gaps = 49/246 (19%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P SP L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-V 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGA-------- 110
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G G + + P ++ ++ + + S A+ +F
Sbjct: 111 -----GSDGQL-----GLMTIEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQF 158
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +V AGG H+ LS G V+GWG
Sbjct: 159 FTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNN 218
Query: 241 EGQLGL 246
GQLGL
Sbjct: 219 AGQLGL 224
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 5/195 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T P + ++++ +
Sbjct: 84 QHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVS 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG R + ++F S S Q+ +P Q
Sbjct: 144 CGNWHCLALAADGQFFTWG-RNSHGQLGLGKEFPSQASPQR--VRSLEGIPLAQVVAGGA 200
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 260
Query: 231 GQVWGWGYGGEGQLG 245
G V+ +G G GQLG
Sbjct: 261 GGVFTFGAGSCGQLG 275
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQ 136
>gi|301112376|ref|XP_002905267.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262095597|gb|EEY53649.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 233
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 40/205 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G AL ++SG+++ WG + GQ S + +TP P +V AAG H ++
Sbjct: 47 GSNHALVLTDSGRVVAWG-WNSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLA 105
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V G V+ WG G K T ALP + V
Sbjct: 106 VDSCGRVWAWG-------CNTYGQLGIGCEMDKLHTPSLVALPAD-------------VH 145
Query: 179 RRKTSSAREESENPASGDEFFT-----------------LSPCLVTLNPGV--KITKVAA 219
++ ++ S + E FT L P +V G+ I +VA
Sbjct: 146 AQRIAAGWAHSAVILTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVAC 205
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQL 244
G HT L++ G ++ WG+G +GQL
Sbjct: 206 GNWHTAALTESGDLYTWGWGKDGQL 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 30/157 (19%)
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
R + S A+ + +P +V V+I VAAGG H+L + G+VW WG
Sbjct: 59 RVVAWGWNSSGQVAAASKEMVQTPTIVEFPKAVEIVAVAAGGMHSLAVDSCGRVWAWGCN 118
Query: 240 GEGQLGLGSRIKMVPTPHLI--PCLEH----AASGKDRPLLVRQGSVNSSG--------- 284
GQLG+G + + TP L+ P H AA +++ G + + G
Sbjct: 119 TYGQLGIGCEMDKLHTPSLVALPADVHAQRIAAGWAHSAVILTSGEIFTFGWGLYNQLGH 178
Query: 285 ---------------KAGRSYVKEIACGGRHSAVVTD 306
+ S + ++ACG H+A +T+
Sbjct: 179 STTQSELQPVIVDALQGLDSNIVQVACGNWHTAALTE 215
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + FT+ C VA G H L+L+D G+V WG+ GQ+ S+ +MV
Sbjct: 32 GGDTFTIGRC----------KAVACGSNHALVLTDSGRVVAWGWNSSGQVAAASK-EMVQ 80
Query: 255 TPHLI 259
TP ++
Sbjct: 81 TPTIV 85
>gi|432862269|ref|XP_004069771.1| PREDICTED: RCC1 domain-containing protein 1-like [Oryzias latipes]
Length = 385
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 36/197 (18%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVK 108
K + GG L T+ +G + TWG S+ G G PE P EA +
Sbjct: 164 KSLALGGEHVILLTA-TGAVYTWGQG-----SHGQLGHGGLLPEEEPRTVEALWGMKMSS 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+AG H V +++AG++Y WGW E Q LP+++ +
Sbjct: 218 VSAGGWHSVCISDAGDLYVWGWNE----------------------SGQLGLPSQRLRKT 255
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
++ ++ +S+ + E S F P L + P ++ V+ G RHT ++
Sbjct: 256 SEKKTDQQEGELSQNSSTHQEEVFISIQAF----PALFDVTPLCEVKTVSCGSRHTAAVT 311
Query: 229 DMGQVWGWGYGGEGQLG 245
G ++ WG+G GQLG
Sbjct: 312 TSGDLYTWGWGEYGQLG 328
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIP----CLEHA 265
G+K++ V+AGG H++ +SD G ++ WG+ GQLGL S R++ +++
Sbjct: 212 GMKMSSVSAGGWHSVCISDAGDLYVWGWNESGQLGLPSQRLRKTSEKKTDQQEGELSQNS 271
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ ++ + Q VK ++CG RH+A VT
Sbjct: 272 STHQEEVFISIQAFPALFDVTPLCEVKTVSCGSRHTAAVT 311
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
P +L+P ++ +A GG H ++L+ G V+ WG G GQLG G
Sbjct: 152 PFFHSLSPHMQAKSLALGGEHVILLTATGAVYTWGQGSHGQLGHG 196
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P ++ G + + GG F+LA G + WG G L G + P +
Sbjct: 177 PVQVAGLNDVTAIAAGGY-FSLALKSDGTVWAWGV---NGDGELGDGTTTDRYVPVQVAG 232
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V+ AAG +H ++VT+ G V+ WG +G+ G + + + +
Sbjct: 233 LTDVMAIAAGGSHSLAVTQDGTVWAWG----------KNTYGTLGDGTRTNRTRPVQIKN 282
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGVK-ITKV 217
Q + G + +T + +N G +L P V+ G++ + ++
Sbjct: 283 LQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVS---GIEHVREI 339
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
AAGG H++ + G VWGWG+ G GQLG G+
Sbjct: 340 AAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT 370
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 104/276 (37%), Gaps = 47/276 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +A G + TWGS ++ GQ + + P + V G+ H ++
Sbjct: 91 GVRSTMALRSDGTVWTWGS-NENGQLGIGTVTDMNVPGQVSGLSGIKAVSGGLGY-HSMA 148
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------ 172
++E G V+TWG D G G + T Q P + A +D A
Sbjct: 149 LSEDGSVWTWG----------KNDNGELG----NGTTLQQNTPVQVAGLNDVTAIAAGGY 194
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+K T A + + GD T V + + +AAGG H+L ++ G
Sbjct: 195 FSLALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTDVMAIAAGGSHSLAVTQDGT 254
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGKDRPLLVRQGSVNSSGK--- 285
VW WG G LG G+R P I L+H A G L R G+V S G
Sbjct: 255 VWAWGKNTYGTLGDGTRTNRT-RPVQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQ 313
Query: 286 -----------------AGRSYVKEIACGGRHSAVV 304
+G +V+EIA GG HS +
Sbjct: 314 RQLGVGSNASSLIPVPVSGIEHVREIAAGGFHSVAM 349
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 90/233 (38%), Gaps = 54/233 (23%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG+ H S+ +GEVY+WG+ D G G+ G SA T
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYG----------DRGQLGN------GTWSARTTPVMAK 80
Query: 168 SDKRAGEEVVKRRKTSSAREE--------SENPASGDEFFT--LSPCLVTLNPGVKITKV 217
+ R T + R + +EN G T P V+ G+K V
Sbjct: 81 GLNHVIDVHTGVRSTMALRSDGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIK--AV 138
Query: 218 AAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGKDRP 272
+ G G H++ LS+ G VW WG G+LG G+ ++ TP + L AA G
Sbjct: 139 SGGLGYHSMALSEDGSVWTWGKNDNGELGNGTTLQQ-NTPVQVAGLNDVTAIAAGGYFSL 197
Query: 273 LLVRQGS-----VNSSGK---------------AGRSYVKEIACGGRHSAVVT 305
L G+ VN G+ AG + V IA GG HS VT
Sbjct: 198 ALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTDVMAIAAGGSHSLAVT 250
>gi|126631716|gb|AAI33847.1| Wu:fc44f06 protein [Danio rerio]
Length = 389
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 43/207 (20%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 174 GSEHALLLTADGTLYSWGSGSHGQLGHGALTSL---EDPQAVEALWGVPIKAVAAGNWHS 230
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 231 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 259
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDM 230
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT ++
Sbjct: 260 EKRRGNGSGNDDQPINTDEKSQTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSA 319
Query: 231 GQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G ++ WG+G GQLG G+ PTP
Sbjct: 320 GDLYTWGWGQYGQLGHGTEHSTDEPTP 346
>gi|89130650|gb|AAI14321.1| Wu:fc44f06 protein [Danio rerio]
Length = 388
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 43/207 (20%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL + G L +WGS G LTS E P+ + AAG H
Sbjct: 173 GSEHALLLTADGTLYSWGSGSHGQLGHGVLTSL---EDPQAVEALWGVPIKAVAAGNWHS 229
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V+ G++Y WGW E Q LP+ G E
Sbjct: 230 AAVSSGGDLYMWGWNE----------------------SGQLGLPSR---------GLEE 258
Query: 177 VKRRKTSSAREE----SENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDM 230
KRR S ++ ++ + D F ++ P LV + +I++++ G RHT ++
Sbjct: 259 EKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPALVDIANMSEISRISCGSRHTAAVTSA 318
Query: 231 GQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G ++ WG+G GQLG G+ PTP
Sbjct: 319 GDLYTWGWGQYGQLGHGTEHSTDEPTP 345
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 108/309 (34%), Gaps = 84/309 (27%)
Query: 53 KDVCG--GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
++VC G +LA E GKL TWG + K P A +V+AA
Sbjct: 39 QNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAA 98
Query: 111 AGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRDFGSAGSFQKDST------------- 154
G HC++V + G Y WG + +C + D G ++D T
Sbjct: 99 IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGR--PLRRDITIPQRCASKLSVRQ 156
Query: 155 ----GKQSALPTEQA---------PPSDKRAGEEVVKRRKTSSAR--------------- 186
G S + T + PP D + V+ + R
Sbjct: 157 VAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLED 216
Query: 187 --------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
E +GD P V + + +AAGG H+ L+D G V+GWG
Sbjct: 217 GILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGR 276
Query: 239 GGEGQLGLGS--RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G G+LG G KMVP + LLV + V +I+C
Sbjct: 277 GEHGRLGFGDDKSSKMVP--------------QKVQLLVEENIV------------QISC 310
Query: 297 GGRHSAVVT 305
GG HS +T
Sbjct: 311 GGTHSVALT 319
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L I +++ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 287 DKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKV-TTGH 345
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P +P A+ +++ SG G K +ACGGRH+ + +
Sbjct: 346 PMEVPINLPPAT-----------NLSGSGAGGHWCSKLVACGGRHTLAIVE 385
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 101/275 (36%), Gaps = 84/275 (30%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+T+ S L+ WG +D GQ S P LP +V AAG H +++T AG
Sbjct: 50 STAVSEFLLAWGK-NDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTSAGT 108
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
V WG T FG G D T ++ R
Sbjct: 109 VLAWG----------TNHFGQLG----DGT---------------------LIDRS---- 129
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
+P V+L PG +T VAAGG H++ L+ +G V WG G GQL
Sbjct: 130 -----------------APVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNGVGQL 172
Query: 245 GLGSRI-KMVPTPHLIP---CLEHAASGKDRPLLVRQG------SVNSSGKAG------R 288
G GS + P ++P + A+ + L V +N +G+ G R
Sbjct: 173 GDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGSTINR 232
Query: 289 SY-----------VKEIACGGRHSAVVTDMSYPIA 312
S V IA G HS VT + +A
Sbjct: 233 STPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALA 267
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 14/215 (6%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
PI L G + V G +LA + +G ++ WG+ + GQ + P L
Sbjct: 79 PIAVSLPLGTTVTAVAAGRF-HSLALTSAGTVLAWGT-NHFGQLGDGTLIDRSAPVEVSL 136
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V AAG H +++T G V WG G GS + +T ++ L
Sbjct: 137 PPGTTVTAVAAGGVHSMALTSVGTVLAWGGNGV-------GQLGD-GSTTRRTTPVEAIL 188
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESEN----PASGDEFFTLSPCLVTLNPGVKITK 216
P+ + A + +A N G +P V L G ++T
Sbjct: 189 PSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGSTINRSTPVSVALPLGTEVTA 248
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+AAG H+L ++ +G WGY G GQLG G+ I
Sbjct: 249 IAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTIN 283
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 78/205 (38%), Gaps = 14/205 (6%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + V GG ++A + G ++ WG + GQ S TP
Sbjct: 130 APVEVSLPPGTTVTAVAAGGV-HSMALTSVGTVLAWG-GNGVGQLGDGSTTRRTTPVEAI 187
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP+ +V AA +H ++VT AG WG T G GS ST A
Sbjct: 188 LPSGVTVTAVAAAESHSLAVTSAGAALAWGLNG-------TGQLGD-GSTINRSTPVSVA 239
Query: 160 LP--TEQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKIT 215
LP TE + R V + A + G +P V L G ++T
Sbjct: 240 LPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVSVALPLGAEVT 299
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGG 240
V AG H+ L+ G WG G
Sbjct: 300 AVVAGRLHSAALTTAGTALAWGDNG 324
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 80/226 (35%), Gaps = 30/226 (13%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + +G + WG + GQ S + TP LP V AAG H ++VT
Sbjct: 204 SLAVTSAGAALAWG-LNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSV 262
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G WG+ T G D T + P A P V R +
Sbjct: 263 GAALAWGYNG-------TGQLG-------DGTTINRSTPVSVALPLGAEVTAVVAGRLHS 308
Query: 183 SSAREESENPASGDEFFTLSPCL----------VTLNPGVKITKVAA-GGRHTLILSDMG 231
++ A GD F V+L G + +A+ HT+ ++ G
Sbjct: 309 AALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLPTGTTLAAIASRDSDHTIAIAGDG 368
Query: 232 QVWGWGYGGEGQLGLGSRIK-MVPTPHLIP---CLEHAASGKDRPL 273
WG GQLG G+ P P +P L A+G D L
Sbjct: 369 TALAWGSNIFGQLGDGTTTNPSTPVPVALPTGITLLTTAAGSDHTL 414
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 103/265 (38%), Gaps = 37/265 (13%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPAR----LCGGDSWKDVCGGGCGFALAT 66
NE + + V++ G IL I R LCG G G +AT
Sbjct: 57 NEVLYSTENDEVFVLGTNCSGCLGTGDILHSIEPRRVDHLCGKKIACLSYGSGPHVVIAT 116
Query: 67 SESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPT-EASVVKAAAGWAHCVSVTEAG 123
E G++ TWG + L +G HG P V++ A G H + +T G
Sbjct: 117 DE-GEVYTWGH---NAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSLVLTSDG 172
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
EV+ WG+ ++G ST Q +P + + + + S
Sbjct: 173 EVFAWGYN-------------NSGQVGSGSTANQ-PIPRKVTGCLQNKIATTIACGQMCS 218
Query: 184 SAREESENPA----SGDEFFTL-------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A ES +G+ L +PC + G+++ K+ G HTL+L+D G
Sbjct: 219 MAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGH 278
Query: 233 VWGWGYGGEGQLGLGSRIKM-VPTP 256
++ WG GQLG G++ PTP
Sbjct: 279 LYAWGANSYGQLGTGNKSNQSYPTP 303
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L P ++ N G K+ +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 141 LVPTHISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRKV 199
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 200 TGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 259
Query: 291 VKEIACGGRHSAVVTD 306
V +I CG H+ V+TD
Sbjct: 260 VHKIVCGYAHTLVLTD 275
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 69/175 (39%), Gaps = 26/175 (14%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP ++ G K CG ++A ESG++ WG
Sbjct: 174 VFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGY- 232
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
G L G G P P + V K G+AH + +T+ G +Y WG
Sbjct: 233 --NGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWG------- 283
Query: 137 AKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S + PT + D+ TS+A+ +S
Sbjct: 284 ---------ANSYGQLGTGNKSNQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQS 329
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD ++ P V G KI ++ G G H +I +D G+V+ WG+ QLG G+
Sbjct: 81 TGDILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGT---- 136
Query: 253 VPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+P + S G V E+ACG HS V+T
Sbjct: 137 --TNHGLVP-------------------THISTNLGNRKVIEVACGSHHSLVLT 169
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 76/318 (23%), Positives = 113/318 (35%), Gaps = 76/318 (23%)
Query: 41 PIPARLCGGDSWKDVCGG-GC-GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
P+P R+ K V GC G +LA S++G++ +WG D + H E P+
Sbjct: 414 PVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHKE-PKLI 472
Query: 99 PLPTEASVVK-AAAGWAHCVSVTEAGEVYTW--------GWRECVP-------------- 135
P V++ +AG+ H +VT G++YTW G +C P
Sbjct: 473 QGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMP 532
Query: 136 ----------SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
+ +RD + SF GK T + K G K +K ++
Sbjct: 533 VGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAG 592
Query: 186 REESENPASGDEFFT----------------LSPCLVTLNPGVKITKVAAGGRHTLILSD 229
S E FT SP +V I ++ G H L L+
Sbjct: 593 IHFSVALTCTGEVFTWGQGSNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTR 652
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
V+ WG G+GQ G G H+ S RP V +N GK
Sbjct: 653 NCAVYAWGSNGKGQCGQG----------------HSTSPVSRPSKV----INLEGKQ--- 689
Query: 290 YVKEIACGGRHSAVVTDM 307
+ +I+ G HS T +
Sbjct: 690 -INQISAGTSHSVAWTTL 706
Score = 42.0 bits (97), Expect = 0.40, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
G +T VA G H L+L+ G VW WG EG LG G + V P +I L
Sbjct: 3687 GQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLP-VQKPMIIQIL 3737
Score = 42.0 bits (97), Expect = 0.41, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 94/263 (35%), Gaps = 107/263 (40%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW- 113
VCG C F L + G +++ G + Y G HG + LP +++ A G+
Sbjct: 3432 VCGQNCTFVLTSQ--GTVLSCGEGN-----YGRLG-HGHSDS---LPN-LTMISALQGFV 3479
Query: 114 -----------AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
H +++TE GEV++WG DFG G +
Sbjct: 3480 ITQVSTSIGSDGHSLALTETGEVFSWG----------DGDFGKLGHGNNE---------- 3519
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
++RK P L+ V + +VA G +
Sbjct: 3520 ---------------RQRK---------------------PKLIESLYDVVVIQVACGHK 3543
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL-LVRQGSVN 281
H+ +LS G+V+ +G G+LGLG I K RP +V +G +N
Sbjct: 3544 HSAVLSQDGEVYVFGSAEHGKLGLGGHIN-----------------KKRPTKIVHKGFLN 3586
Query: 282 SSGKAGRSYVKEIACGGRHSAVV 304
+K IACG H+ +
Sbjct: 3587 ---------IKYIACGQNHTICI 3600
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V EIACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V EIACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 33/225 (14%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTE 103
LCG G G A+AT++ G++ +WG G S L +G HG TP
Sbjct: 71 LCGKKIVSLSYGTGPHVAIATAD-GEVFSWGH---NGYSQLGNGTSTHGLTPALVSTNLL 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V++ A G H +++T GEV+ WG+ ++G ST Q P
Sbjct: 127 GKRVIEVACGSHHTIALTTDGEVFAWGYN-------------NSGQVGSGSTANQPT-PR 172
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE-----------NPASGDEFFTLSPCLVTLNPG 211
+ + + + S A +S G+ +PC + G
Sbjct: 173 RVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNGNQQTPCRIAALQG 232
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
V + +VA G HT+ L+D G V+ WG GQLG G++ + VPT
Sbjct: 233 VNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVPT 277
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N G ++ +VA G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 LTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLEH 264
CL++
Sbjct: 175 SSCLQN 180
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P R+ K V CG ++A +SG++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP +V++ A G+AH +++T+ G VY+WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+G G+ K + + + TE+ S+ A TS+A+ +S
Sbjct: 259 -ANSYGQLGTGNKCNQAVPTLINTEKERMSEVAA----CHTSHTSAAKTQS 304
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 91/237 (38%), Gaps = 61/237 (25%)
Query: 13 KMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVC-GGGCGFALATSESGK 71
KM C G+ T P K P +S RL +++ C G +LA + G+
Sbjct: 56 KMYACGNNDHGQLGHDLDTLPNKRPRMSRF-KRLTSLENYIITCISCGTAHSLALTNWGQ 114
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWG 129
+ +WGS + GQ ++G P P + + VV+ A+G HC+++T GE+Y WG
Sbjct: 115 VFSWGS-NAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 172
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ S+ + G S E+ P
Sbjct: 173 ----------------SNSYGQLGIGTTS----EKVP----------------------- 189
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
P L+ GV I +A GG H+ +S G ++GWG GQLGL
Sbjct: 190 ------------MPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGL 234
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL--EHA---ASG 268
IT ++ G H+L L++ GQV+ WG GQLG + PTP +I + +H ASG
Sbjct: 96 ITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASG 155
Query: 269 KDRPL-LVRQGSV-----NSSGKAGRSYVKE------------------IACGGRHSAVV 304
+ L L G + NS G+ G E IACGG HS V
Sbjct: 156 QYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAV 215
Query: 305 T 305
+
Sbjct: 216 S 216
Score = 45.8 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 84/208 (40%), Gaps = 51/208 (24%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAAAGWAHCV 117
LA + +G+L WGS SY G G T E P+PT + A G H
Sbjct: 160 LALTNNGELYAWGS-----NSYGQLGI-GTTSEKVPMPTLIQSLAGVPIAFIACGGNHSF 213
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+V+++G ++ GW + FG G +S + L T ++ +
Sbjct: 214 AVSKSGAIF--GWGK--------NTFGQLGLNDLNSRCYPTQLRTLRS-----------L 252
Query: 178 KRRKTSSAREESENPASGDEFFTLSP----------CLVTLNP-------GVKITKVAAG 220
R S + S + FT C + P G KIT++A G
Sbjct: 253 GVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACG 312
Query: 221 GRHTL-ILSDMGQVWGWGYGGEGQLGLG 247
RHTL + G+++G+G GG GQLG+G
Sbjct: 313 RRHTLAFVPSRGKIYGFGLGGVGQLGIG 340
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 61/229 (26%), Positives = 89/229 (38%), Gaps = 30/229 (13%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKD-VCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G E++P+ P + G K+ VCGG L G + T GS + GQ L
Sbjct: 13 GIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLL--HDGSVYTCGS-NSCGQ--LGH 67
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
K G TPE + + G AH ++V E G+V+ WG G G
Sbjct: 68 NKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWG-------------AGEEGQ 114
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------E 197
+T +P D R + + + + ++ + SG E
Sbjct: 115 LGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGE 174
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
L P + G+ + K+ AGG H+ LS G V+GWG GQLGL
Sbjct: 175 PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGL 223
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
KIT V+ G H+L +++ GQV+ WG G EGQLGLG+ V P LI
Sbjct: 84 KITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLI 130
Score = 43.9 bits (102), Expect = 0.090, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 28/121 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL--GSRIKMVPTPHL----IPCLEHAA 266
+I +V G +H + LS GQ++ WG GQLGL G K+ P P IP + A
Sbjct: 137 RIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITA 196
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRHSAVV 304
G L G+V N +G+ G + +++ I+CG H+A +
Sbjct: 197 GGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAAL 256
Query: 305 T 305
T
Sbjct: 257 T 257
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 27/246 (10%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITW 75
++T VY G + I ++ + + V CG ++ + G++ +
Sbjct: 203 QQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSC 262
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR---- 131
G +D GQ K P +V+AA G+ H + + GE+Y +G
Sbjct: 263 G-FNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQ 321
Query: 132 -------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRKT 182
+ + K ++F + + Q S G Q+ L + E PS + GE
Sbjct: 322 LGIETNGQALIQPKQIQEFLTVSNIQH-SGGNQNQLHSGQEHNQPSSQSLGE-------- 372
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
S A + A + P + L+ V I+K+A G H++ L + GQ++ +G G G
Sbjct: 373 SGAIMQG--LAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHG 430
Query: 243 QLGLGS 248
QLG G+
Sbjct: 431 QLGQGN 436
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 32/136 (23%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V + +T++AAG H +L+ G V G+ G GQLG G+ K + TP I L
Sbjct: 63 PSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHGNN-KSISTPKKIESL 121
Query: 263 EH-------AASGKDRPLLVRQG------SVNSSGKAGR-----------------SYVK 292
++ +A+G + ++ Q N+ G+ G + V
Sbjct: 122 KNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVT 181
Query: 293 EIACGGRHSAVVT-DM 307
++C HS +VT DM
Sbjct: 182 NVSCSYYHSLIVTQDM 197
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 50/236 (21%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
K + CG +LA S+ G+L WG + GQ + S P+ + +V+
Sbjct: 256 KXIIQITCGDYHSLALSKGGELFAWGQ-NLHGQLGIGSQFASIAIPQIVENLSGIPLVQI 314
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST--------------- 154
+AG AH ++++ +G +Y+WG DFG G D
Sbjct: 315 SAGKAHSMALSMSGNIYSWG----------RNDFGQLGLGHTDGKDFPSLIEALDNQKVE 364
Query: 155 -----GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
G +AL T+ AG K + ++E L P LVT
Sbjct: 365 FLACGGSHTALLTKDGLVFTFGAG----KHGQLGHNSTQNE----------LRPRLVTEL 410
Query: 210 PGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLE 263
G ++T++A G +HTL +SD+G+V+ +G G EGQLG G+ +++P P +P E
Sbjct: 411 AGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNE 466
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 195 GDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
G +F +++ P +V G+ + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 291 GSQFASIAIPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGH----- 345
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
GKD P L+ V+ +ACGG H+A++T
Sbjct: 346 ------------TDGKDFPSLIE--------ALDNQKVEFLACGGSHTALLT 377
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 116/303 (38%), Gaps = 63/303 (20%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + P+ PI A L + CG G L ++ G++ T
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPV--PIDA-LAERRIVQIACGSGHTVVL--TDEGEVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG DD L G +G P ++ + G H +VT +G++YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGM 114
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------GEEVVKRRKTSSAR 186
+G G + TG + E R V+ K
Sbjct: 115 ----------YGKLG--HGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTW 162
Query: 187 EESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ EN SG E PC V G I +++A G HT LS+ G+V+ +G G G+
Sbjct: 163 GDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGR 222
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
LG S + P + L AG+ VK++ACGG H+A
Sbjct: 223 LGHNSE-RNQPVARFVEAL-----------------------AGKR-VKQVACGGFHTAA 257
Query: 304 VTD 306
VT+
Sbjct: 258 VTE 260
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 41/210 (19%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A + SG L TWG G Y G ET P E V + A G H V +
Sbjct: 100 AVTVSGDLYTWG-----GGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLL 154
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
E +VYTWG +E + S D+ G Q LP P ++ G+ +V+
Sbjct: 155 ENKDVYTWGDKE------------NGVSGHGDTEGHQY-LPC----PVEELRGKNIVQIS 197
Query: 181 ----KTSSAREESENPASGD-EFFTL-------SPC--LVTLNPGVKITKVAAGGRHTLI 226
T++ E E G+ +F L P V G ++ +VA GG HT
Sbjct: 198 ACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAA 257
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
+++ G+V+ WG G GQLG G ++ K VPT
Sbjct: 258 VTETGEVYTWGGGEHGQLGHGDKVNKTVPT 287
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ + A G K V GG A A +E+G++ TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVARFVEA--LAGKRVKQVACGGFHTA-AVTETGEVYTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P E VV+ GW+H V++T+ GEVYTWG
Sbjct: 276 GHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWG 320
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 95/251 (37%), Gaps = 73/251 (29%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF-ALATSESGKLITWG 76
VY WG + G + P P G + + CGF A SE G++ T+G
Sbjct: 159 VYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISA--CGFHTAALSEFGEVFTFG 216
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
EG+ + G + E +P EA V + A G H +VTE GEVYTWG E
Sbjct: 217 ----EGK-FGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGE 271
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
G G G++V KT R ES
Sbjct: 272 ----------HGQLGH------------------------GDKV---NKTVPTRVES--- 291
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
L LV V+IT G HT+ L+D G+V+ WG G G+LG K
Sbjct: 292 --------LVEKLV-----VQIT---CGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTK- 334
Query: 253 VPTPHLIPCLE 263
V P L+ LE
Sbjct: 335 VTLPKLVDVLE 345
>gi|410907970|ref|XP_003967464.1| PREDICTED: RCC1 domain-containing protein 1-like [Takifugu
rubripes]
Length = 308
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 45/207 (21%)
Query: 63 ALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAGWAH 115
+ S +G + TWG S G LTS E P EA V A GW H
Sbjct: 107 VMLLSATGAVYTWGLGSHGQLGHGVLTS-------EEKPRAVEALWGMPMVCVATGGW-H 158
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V +++ G++Y WGW E +G S + LP + +P +AG
Sbjct: 159 SVCISDGGDLYVWGWNE-------------SGQLGLPSRSLRKTLPQQSSP----KAG-- 199
Query: 176 VVKRRKTSSAREESENPASGDEFFT---LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
SS+ EE++ +E F P L+ ++P +I V+ G RHT ++ G
Sbjct: 200 -------SSSTEETQEGDKHEEVFISIQAFPALLDVSPSCEIMAVSCGSRHTAAVTTTGD 252
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++ G+G GQLG +K P L+
Sbjct: 253 LYTCGWGDYGQLG-HPTLKSTDEPQLV 278
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 168 SDKRAGEEVVKRRKTSSAREESENPA-SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
SD+ ++ K KT + P G T +P +L+P +K VA H ++
Sbjct: 50 SDRLESWDLQKVEKTPTWNSPLNLPLLPGGYIATKAPLYRSLSPHLKAKSVAVSAEHVML 109
Query: 227 LSDMGQVWGWGYGGEGQLGLG 247
LS G V+ WG G GQLG G
Sbjct: 110 LSATGAVYTWGLGSHGQLGHG 130
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ + VA GG H++ +SD G ++ WG+ GQLGL SR P ++S ++
Sbjct: 146 GMPMVCVATGGWHSVCISDGGDLYVWGWNESGQLGLPSRSLRKTLPQQSSPKAGSSSTEE 205
Query: 271 RPLLVRQGSVNSSGKAGRSY--------VKEIACGGRHSAVVT 305
+ V S +A + + ++CG RH+A VT
Sbjct: 206 TQEGDKHEEVFISIQAFPALLDVSPSCEIMAVSCGSRHTAAVT 248
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 105/297 (35%), Gaps = 78/297 (26%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V E
Sbjct: 50 SLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEE 109
Query: 123 GEVYTWG---WRECV--PSAKVTRDFGSAGSFQKDST-----------------GKQSAL 160
G Y WG + +C K ++ G + +D T G S +
Sbjct: 110 GRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVRQLTAGGTHSVV 169
Query: 161 PTEQA---------PPSDKRAGEEVVKRRKTSSA-----------------------REE 188
TE+ PP D + V+ + + E
Sbjct: 170 LTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNE 229
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+GD SP V G+ + +AAGG H++ L+ G V+GWG G G+LG G
Sbjct: 230 YGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGD 289
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ ++P H +G+ V +++CGG HS T
Sbjct: 290 D----KSSKMLPQKVHLLAGEP--------------------VVQVSCGGTHSVAAT 322
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 99/252 (39%), Gaps = 35/252 (13%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
++ +E G + TWG G + P + +V A G H +++ +
Sbjct: 166 HSVVLTEEGHVWTWGQP-------WPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQ 218
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP---PSDKRAGEEVVK 178
GEV+ WG ++G G+ D+ + S +P + D AG
Sbjct: 219 HGEVWAWG----------NNEYGQLGT--GDTQPRSSPVPVKGLTGLVLVDIAAGGWHSM 266
Query: 179 RRKTSSA-----REESENPASGDEFFT-LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
A R E GD+ + + P V L G + +V+ GG H++ + G+
Sbjct: 267 ALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGR 326
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
++ +G G G+LG + P +P H S R +V + N S VK
Sbjct: 327 MFSFGRGDHGRLGYSGAVT-TGHPVEVPVSLHHYS---RHNIVSEDEANGSTGW---VVK 379
Query: 293 EIACGGRHSAVV 304
+ACGGRH+ V
Sbjct: 380 LVACGGRHALAV 391
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 91/220 (41%), Gaps = 34/220 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G + WG++ G P P+P + +V AAG AH ++
Sbjct: 40 GDSHSLAVHADGSVWAWGAS---ASGLREEGALSRRFAPVPVPGLSDIVSVAAGGAHSLA 96
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-----G 173
V G ++TWG +G G D T ALP + A S RA G
Sbjct: 97 VRADGTLWTWG----------GNPYGQLG----DGTTTARALPVQVAGLSGVRAVATGLG 142
Query: 174 EEVVKRRK-TSSAREESENPASGD----EFFTLSPCLVTLNPGVK-ITKVAAGGRHTLIL 227
+ R T A ++ GD ++ T P PG+ + VAAGG H+L++
Sbjct: 143 HSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPI-----PGLSGVRSVAAGGFHSLVV 197
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
D VW WG G+LG GS + P IP L + AS
Sbjct: 198 RDDDTVWAWGSNDYGELGDGSTSRRA-VPRAIPGLRNVAS 236
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 117/290 (40%), Gaps = 37/290 (12%)
Query: 19 ETVVYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+ ++ WG P G + + +P ++ G + V G G +LA G + WG
Sbjct: 100 DGTLWTWGGNPYGQLGDGTTTARALPVQVAGLSGVRAVATG-LGHSLALRADGTVWAWG- 157
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ GQ L G + P P+P + V AAG H + V + V+ WG
Sbjct: 158 LNQFGQ--LGDGTTSQWLTPRPIPGLSGVRSVAAGGFHSLVVRDDDTVWAWG-------- 207
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV--------VKRRKTSSAREES 189
+ D+G G D + + A+P +A P + V T SA +
Sbjct: 208 --SNDYGELG----DGSTSRRAVP--RAIPGLRNVASVAGGCYHSLAVHADGTLSAWGLN 259
Query: 190 ENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
GD F+ +P V GV+ VA H+L L G VW WG G G+ G G
Sbjct: 260 SYGQLGDGTFSNRATPRPVPGLSGVRC--VATSFFHSLALRAEGTVWAWGLNGYGEQGDG 317
Query: 248 SRIKMVPTPHLIPCLE---HAASGKDRPLLVR-QGSVNSSGKAGRSYVKE 293
+ + PTP +P L A+G L V G+V++ G G+ + +
Sbjct: 318 TASRQSPTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGD 367
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V EIACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 106/273 (38%), Gaps = 38/273 (13%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSGNEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSAPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q PT + + + V
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---PTPRKVTNCLHIKKVVGIA 187
Query: 180 RKTSSAREESEN-------------PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+S+ +N G+ L+P V V + ++ G HTL
Sbjct: 188 CGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLA 247
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+D G ++ WG GQLG G++ ++ H++
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVL 280
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V EIACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 94/273 (34%), Gaps = 88/273 (32%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAH 115
CG ++A E G+ +WGS D GQ G H + P+ +V++ A G H
Sbjct: 94 ACGLQHSMALDEWGQPFSWGS-DSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V +T G++Y WG A S+ + G +S E P +
Sbjct: 153 TVVLTNNGDLYAWG----------------ANSYGQCGLGNRSN--KETTPQA------- 187
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
LS L G+ I +A G HT LS G V+G
Sbjct: 188 -------------------------LSSIL-----GIPIALIACGSNHTFALSQSGAVFG 217
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLE----HAASGKD-RPLLVRQGSVNSSGKAGR-- 288
WG GQLGL R HL H + G+D L G V + G AG
Sbjct: 218 WGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCG-AGEYG 276
Query: 289 ---------------------SYVKEIACGGRH 300
S V ++ACG RH
Sbjct: 277 QTGHGNTKDELVPRKVMELMGSTVTQVACGRRH 309
Score = 45.4 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 28/107 (26%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVPTPHLI 259
SP LV G ++ +A G +H++ L + GQ + WG GQLG LGS
Sbjct: 78 SPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGS----------- 126
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
HA +D+P +++ + + V ++ACG H+ V+T+
Sbjct: 127 ----HA---QDKPKIIKTLATKN--------VIQVACGSYHTVVLTN 158
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 74/288 (25%), Positives = 115/288 (39%), Gaps = 66/288 (22%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKARKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG ECV +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECV---RVPRNIRSLSEIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-LSPCLVTLNPGVKITKVAAGGR 222
+ G EV S + + G E+ SP ++ G+ ++AAGG
Sbjct: 154 K--------GSEVF-----SWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGA 200
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE-----HAASGKDR-PLLV 275
H+ +L+ G ++GWG GQLGL + VPT L+ L H G+D L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT--LLKSLRSQKVVHICCGEDHTAALT 258
Query: 276 RQGSVNSSGKAGR----------------------SYVKEIACGGRHS 301
++G V + G G S V +I CG +H+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHT 306
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + V P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G Y +IA GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 39/260 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCV 117
G G A +++G + TWG GQ L G + P P+P VK+ +AG+ H V
Sbjct: 281 GAGHCAAVTDTGLVYTWGQGR-YGQ--LGHGDDVDKIIPQPVPRIKGEVKSVSAGFYHTV 337
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA-------PPSDK 170
+VT G ++TWG G G + Q +PT A P +
Sbjct: 338 AVTHHGALFTWG-------------DGKEGKLGHNDNA-QRLIPTLVAAFIEWGMPVAAA 383
Query: 171 RAG---EEVVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+AG V+ RR S +S G++ SP ++ + +AAG H++
Sbjct: 384 QAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSV 443
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-------AASGKDRPLLVR-Q 277
L+D GQ++ WG G G+LG GS V P + + H A+G+ + R +
Sbjct: 444 ALTDQGQIYTWGCGKLGRLGHGSDSDEV-LPRKLALISHDTIKAIAVAAGEAHTCIFRSE 502
Query: 278 GSVNSSGKAGRSYVKEIACG 297
GS+ + G+ + E +C
Sbjct: 503 GSLITLGRVSHGRMAEGSCA 522
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 117/296 (39%), Gaps = 82/296 (27%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G ++ + + G LA E G+L+ W
Sbjct: 167 REGHVWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALEEDGRLLAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
G+ ++ GQ L +G T P P+ + ++V AAG H ++T+ GEVY WG E
Sbjct: 221 GN-NEYGQ--LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGE- 276
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA 193
G G D + K
Sbjct: 277 ---------HGRLGLGDNDKSSK------------------------------------- 290
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM- 252
+ P V L I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 291 -------MVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTG 343
Query: 253 --VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ P IP E + + D + G+ K IACGGRH+ + +
Sbjct: 344 QPLELPIKIPPPEGSFNHTDEE------------EEGKWSAKSIACGGRHTLAIVE 387
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 79/234 (33%), Gaps = 74/234 (31%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+I WGS +D GQ + + + E SV +G + +++ + G ++TWGW
Sbjct: 7 IIAWGSGED-GQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
Q+ + G Q TE P K
Sbjct: 66 ------------------QRGTLGHQPETKTENIPSRVKALAN----------------- 90
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
VKIT+ A GG H L + D G+ + WG GQ G
Sbjct: 91 --------------------VKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG------ 124
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
E RP VR+ V A + V+++A GG HS V+T
Sbjct: 125 ----------EEPLKDEMGRP--VRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT 166
>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 469
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 95/240 (39%), Gaps = 25/240 (10%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 89 SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 148
Query: 123 GEVYTWGWRECVPSAKVT--RDFGSAG---SFQKDST-GKQSALPTEQ--APPSDKR--- 171
G Y WG P+ VT ++G G ++D T + +PT Q AP R
Sbjct: 149 GHAYAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVA 208
Query: 172 -AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
G V + + GD +P V V++ +A G H L L++
Sbjct: 209 AGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRV--IAVGAFHNLALTED 266
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLI--------PCLEHAASGKDRPLLVRQGSVNS 282
G +W WG GQLG G P H I ++ AA G L QG +NS
Sbjct: 267 GILWAWGNNEYGQLGTGD---TQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEINS 323
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 116/298 (38%), Gaps = 64/298 (21%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S P R+ G + + V G LA +E G L W
Sbjct: 219 QEGHVWTWGQPWPPGDIKQIS-----TPVRVQGLEKVR-VIAVGAFHNLALTEDGILWAW 272
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYT---W 128
G+ + Y G P P+ E S+V AAG H ++T GE+ + +
Sbjct: 273 GNNE-----YGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEINSLPCY 327
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
+R C ++ + +QK + + + R E
Sbjct: 328 LFRACFKDVQIIK-------YQKYT----------------------YYTMKVYAWGRGE 358
Query: 189 SENPASGDEFFT-LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
GD+ + + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G
Sbjct: 359 HGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG 418
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ G D L + S + G+ K +ACGGRH+ +
Sbjct: 419 RKLTT-----------GQPMGVDIDLPPPK---TRSSRDGQWQAKYVACGGRHTLAIV 462
>gi|301768835|ref|XP_002919849.1| PREDICTED: RCC1 domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 296
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 21/138 (15%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AA GW H V V+EAG++Y WGW E A TR G + K+++G
Sbjct: 136 AAGGW-HSVCVSEAGDIYIWGWNESGQLALPTRSLAEDGKTVAKEASGLN---------- 184
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E + R+T+ A + + P + F P L+ L + + G RHT ++
Sbjct: 185 ------EGGSEGRRTARAEDGAPAPFIALQPF---PALLDLPQDADAVQASCGSRHTAVV 235
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 236 TRTGELYTWGWGKYGQLG 253
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP +A V+A+ G H VT GE+YTWGW
Sbjct: 208 QPFPALLDLPQDADAVQASCGSRHTAVVTRTGELYTWGW 246
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 121 PRLLEALQGLPMAEVAAGGWHSVCVSEAGDIYIWGWNESGQLALPTR 167
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V EIACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|307190185|gb|EFN74300.1| X-linked retinitis pigmentosa GTPase regulator [Camponotus
floridanus]
Length = 807
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 101/270 (37%), Gaps = 84/270 (31%)
Query: 40 SPIPARLCG--GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
SPI CG G + G + TS+ G ++ WGS + EGQ L G G +P
Sbjct: 179 SPILIYDCGLAGPRIVQIAAGSHHSMILTSDGG-VVAWGS-NLEGQLGL-PGVSGLVNKP 235
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+P V + +AG+ H +TE+G VY G E S K+ D +F KQ
Sbjct: 236 TKVPIPEPVKEISAGYYHSAFLTESGLVYVCGESE---SGKLGIDV----NFSTQVAPKQ 288
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
LPT P + +T
Sbjct: 289 MQLPT-----------------------------------------------PAIHVT-- 299
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
GG HTL+L++ ++ G GQLG+G+ + + P +H A G R
Sbjct: 300 -CGGHHTLVLAENSNIYCSGSNASGQLGMGTNLNEIHMP------KHLARGSLR------ 346
Query: 278 GSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
+ +IACG HSA++T++
Sbjct: 347 ----------NEKIVKIACGESHSAILTEL 366
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 94/268 (35%), Gaps = 93/268 (34%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+ A CG + +C +SG+L +GS +D GQ L H P +
Sbjct: 83 PVVAIECGDEHSAVIC-----------QSGRLFVFGS-NDWGQLGLGHKNHISKPSCVKI 130
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
V A G AH + T A +++ + GS Q+ G+
Sbjct: 131 LKPEKVTHVACGRAHTLICTGAQKIF------------------ACGSNQEGQLGR---- 168
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL--NPGVKITKVA 218
EN A GD + SP L+ G +I ++A
Sbjct: 169 -----------------------------ENSAIGDS--SSSPILIYDCGLAGPRIVQIA 197
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
AG H++IL+ G V WG EGQLGL +V P +P E
Sbjct: 198 AGSHHSMILTSDGGVVAWGSNLEGQLGLPGVSGLVNKPTKVPIPE--------------- 242
Query: 279 SVNSSGKAGRSYVKEIACGGRHSAVVTD 306
VKEI+ G HSA +T+
Sbjct: 243 -----------PVKEISAGYYHSAFLTE 259
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 82/214 (38%), Gaps = 26/214 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+++G
Sbjct: 185 AVTEDGDLYGWGWGR-YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 243
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 244 LYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDSTISQISGGWRHTMA 289
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E + G+ SP V KI++VA G RHTL LS+ V+
Sbjct: 290 LTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVF 349
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
WG G GQLG G + TP LI L SG
Sbjct: 350 SWGRGTSGQLGNGEIVDR-NTPVLIDALSTDGSG 382
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 115/303 (37%), Gaps = 58/303 (19%)
Query: 19 ETVVYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E VY WG+ S + +P P + G K + CG LA + +G++
Sbjct: 85 ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA---CGDSHCLAVTMAGQVQ 141
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 142 SWGR-NQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGR- 199
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE--- 190
+G+ G ++ LP + + ++ R T + +
Sbjct: 200 ---------YGNLGLGDRND----RLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYT 246
Query: 191 -------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
GD L P + I++++ G RHT+ L+ G+++GWG+ GQ
Sbjct: 247 YGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQ 306
Query: 244 LGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
+G+G+ H P H + + ++ACG RH+
Sbjct: 307 VGVGNN-----DDHCSPVQVHFPEDQK--------------------ISQVACGWRHTLA 341
Query: 304 VTD 306
+++
Sbjct: 342 LSE 344
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 96/261 (36%), Gaps = 55/261 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G ++A L +WG +D GQ HG+ + +PT S + G
Sbjct: 22 GASHSVALLTGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAPGITSVICG 74
Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
H + +E +VY+WGW DFG G F L +Q
Sbjct: 75 ADHTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQI 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D + + S R ++ G +L P + GV + +AAG HT
Sbjct: 125 ACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTA 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G ++GWG+G G LGLG R L+P + G+ L
Sbjct: 185 AVTEDGDLYGWGWGRYGNLGLGDR-----NDRLLPEKVSSVEGEKMVL------------ 227
Query: 286 AGRSYVKEIACGGRHSAVVTD 306
+ACG RH+ V+D
Sbjct: 228 --------VACGWRHTITVSD 240
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + + + A GW H +
Sbjct: 282 GGWRHTMALTSEGKLYGWG-WNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTL 340
Query: 118 SVTEAGEVYTWG 129
+++E V++WG
Sbjct: 341 ALSEKKNVFSWG 352
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 37/274 (13%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K +P ++ G ++A +E+G+L WG G L
Sbjct: 161 PQKIQTFQGVPIKMVAA---------GAEHSVAITENGELYGWGWGR-YGNLGLGDRNDR 210
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE +V A GW H +SV+ G +YT+GW + +G G
Sbjct: 211 WIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSK----------YGQLGH---- 256
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR----------EESENPASGDEFFTLS 202
+ S +P + SDK + R + + + GD S
Sbjct: 257 GNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCS 316
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V K+ +++ G RHT+ +++ V+ WG G GQLG G + +P +I L
Sbjct: 317 PVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDR-NSPKIIEAL 375
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
+ G P + + SGK+G S + A
Sbjct: 376 --SVDGSSGPHIESSNTDLLSGKSGASLSERYAV 407
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 30/204 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA------AAG 112
G +A + +WG +D GQ HG+T + LPT S + A A G
Sbjct: 21 GASHTVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTHLSALDAQQIDSIACG 73
Query: 113 WAHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+ E+Y+WGW DFG G L +Q
Sbjct: 74 ADHTLAYSESRNELYSWGWG----------DFGRLGHGNSSDLLIPQPIIALQGLRIKQI 123
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ S R ++ G +L P + GV I VAAG H++
Sbjct: 124 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSV 183
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSR 249
+++ G+++GWG+G G LGLG R
Sbjct: 184 AITENGELYGWGWGRYGNLGLGDR 207
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD-MGQVWGWGYGGEGQL 244
R E GD L P ++ +I +A G HTL S+ +++ WG+G G+L
Sbjct: 39 RGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRL 98
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G G+ + LIP +P++ QG +K+IACG H V
Sbjct: 99 GHGNSSDL-----LIP----------QPIIALQGL----------RIKQIACGDSHCLAV 133
Query: 305 T 305
T
Sbjct: 134 T 134
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 81/218 (37%), Gaps = 65/218 (29%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSV 119
L +E G+L WG G S L +G + P + T V + + G H +++
Sbjct: 87 VLLVTEDGELYAWGH---NGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T GEV+ WG+ C G GS ST Q PT
Sbjct: 144 THEGEVFAWGYNNC----------GQVGS---GSTANQ---PTP---------------- 171
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
RK S+ + I +A G ++ ++D G+V+GWGY
Sbjct: 172 RKVSNCLQNK-----------------------VIVNIACGQTSSMAVTDNGEVYGWGYN 208
Query: 240 GEGQLGLGSRIKMVPTPHLIP----CLEHAASGKDRPL 273
G GQLGLG+ + LI C+ ASG L
Sbjct: 209 GNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSL 246
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 27/108 (25%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+SP LV+ N G ++T+V+ G H+L L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 VSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQ-PTPRKV 174
Query: 260 P-CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
CL++ + IACG S VTD
Sbjct: 175 SNCLQNKV------------------------IVNIACGQTSSMAVTD 198
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 25/113 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T++P + G K+ ++ G G H L++++ G+++ WG+ G QLG G+ +
Sbjct: 56 TGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
V P+LV S N GK V E++CG HS +T
Sbjct: 116 VS-----------------PILV---STNLQGKR----VTEVSCGSHHSLALT 144
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ K + CG ++A +++G++ WG
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWG-Y 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L + + TP V++ A+G+AH +++T+ G +Y WG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWG 258
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 57/209 (27%), Positives = 83/209 (39%), Gaps = 43/209 (20%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG L E G++ T G + +GQ L G PEP +V A G +H
Sbjct: 41 CGGNHSVFLL--EDGEVYTCG-LNTKGQ--LGHESEGSKPEPIGALAGQHIVHVACGESH 95
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V++++ G+V++WG GS G G + P K+ ++
Sbjct: 96 SVALSDQGQVFSWG-------------AGSDGQL-----GLTTIEDAVTVPRLIKKLNQQ 137
Query: 176 VVKRRKTSSAREESENPASGDEFFT------------------LSPCLVTLNPGVKITKV 217
+ + S A+ +FFT SP V G+ + +V
Sbjct: 138 TI--LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQV 195
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
AAGG H+ LS G V+GWG GQLGL
Sbjct: 196 AAGGAHSFALSLSGAVFGWGKNSSGQLGL 224
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 7/190 (3%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG ++A S+ G++ +WG+ D GQ LT+ + T P + ++++ + G H
Sbjct: 90 ACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G+ +TWG + + ++ S S Q+ +P Q +
Sbjct: 149 CLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPLAQVAAGGAHSFAL 205
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ + S DE SPC V L K+ ++ G HT +L+ G V+
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFT 265
Query: 236 WGYGGEGQLG 245
+G G GQLG
Sbjct: 266 FGAGSCGQLG 275
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 72/284 (25%), Positives = 103/284 (36%), Gaps = 76/284 (26%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ WG + GQ + S PEP + + +V + A G H V + E GEVYT G
Sbjct: 1 MLCWGYSS-FGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ G +S G + P AG+ +V A ES
Sbjct: 60 -------------LNTKGQLGHESEGSKPE-------PIGALAGQHIVH-----VACGES 94
Query: 190 ENPASGDEFFTLS--------------------PCLVTLNPGVKITKVAAGGRHTLILSD 229
+ A D+ S P L+ I +++ G H L L+
Sbjct: 95 HSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA 154
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV--- 280
GQ + WG GQLGLG +P IP + AA G L G+V
Sbjct: 155 DGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 281 --NSSGKAGRSYVKE-----------------IACGGRHSAVVT 305
NSSG+ G S ++ I+CG H+AV+T
Sbjct: 215 GKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
>gi|168058364|ref|XP_001781179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667416|gb|EDQ54047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 14/214 (6%)
Query: 43 PARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
P R+ G +S + V G G ++A + G L TWG + T + +TP+
Sbjct: 126 PQRVRGLESVEVVSARGSGVVSMAIARDGSLWTWGKSKRGQLGLGTKIMYAQTPKRVEAL 185
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
VV+ A GW H ++ T G VY+WG+ G G DS ++++
Sbjct: 186 VGQQVVQVALGWGHALARTAEGHVYSWGYAAN----------GRLGFQLSDSESAETSVK 235
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ +P + R E ++ E+ E S P + +T+++ G
Sbjct: 236 -KTSPTAIARVDNESIEEAAYRQVLEDMEKEKS--PVLAWEPVRINSLCSQHVTEISCGM 292
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
H+L L++ G++ +G GQLG + I V +
Sbjct: 293 DHSLTLNEKGELCSFGDNSLGQLGRSTAISAVQS 326
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 105/286 (36%), Gaps = 84/286 (29%)
Query: 8 REENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPAR---LCGGDSWKDVCGGGCGFAL 64
R +NE +EE V L EKSP+L+ P R LC + CG +L
Sbjct: 244 RVDNESIEEAAYRQV-----LEDMEKEKSPVLAWEPVRINSLCSQHVTEISCG--MDHSL 296
Query: 65 ATSESGKLITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+E G+L ++G +A QS + + ++ E + E V+ AG
Sbjct: 297 TLNEKGELCSFGDNSLGQLGRSTAISAVQSSIFAVENSEDHVQGLIRGE-KVLHVGAGLG 355
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H ++VT G +Y+WGW AG
Sbjct: 356 HSLAVTAQGSIYSWGW----------------------------------------NAGH 375
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
++ + + S+ GD + + G H+L L+ GQ+W
Sbjct: 376 QLGRDERQDSSLPACVEDVEGD-----------------VVALVGGRAHSLALTSQGQLW 418
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIP-----CLEHAASGKDRPLLV 275
WG G G+LGLGS P+P L+ C+ A G D L++
Sbjct: 419 VWGSGKNGRLGLGSPADE-PSPLLLESLENHCIAEVACGFDHSLIL 463
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 107/270 (39%), Gaps = 47/270 (17%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
I CG D V G + + ++ GKL GQ L ++ P+
Sbjct: 24 IHQLACGLDHTAFVAKNGYLYTMGSNALGKL-------GIGQQSL---QNSFQPQLVSAL 73
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
++ V++ + G +H ++ ++GE+++WG S++ S GS S L
Sbjct: 74 SKYKVMQVSCGHSHTCAIIDSGELFSWG-----DSSEGQLGINSNGSHYNPQLVNFSDLK 128
Query: 162 TEQAPPSDKRAGE----EVVKRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+D G V+K + S + +G++ P L LN +I K
Sbjct: 129 GINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFL--LNSLSQIIK 186
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
V G HTL L + G+V+ G EGQLG G + +P L+ LEH
Sbjct: 187 VKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEH------------ 234
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
S++K+I G HSA +TD
Sbjct: 235 ------------SFIKKIF-AGSHSAAITD 251
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|124359876|gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
Length = 444
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 105/297 (35%), Gaps = 73/297 (24%)
Query: 60 CG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
CG F G L WG D L G P P +V A G H V+
Sbjct: 108 CGLFHSCLVVDGGLWVWGKGDG---GRLGLGHESSMFVPTLNPHLENVKSVALGGLHSVA 164
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T AGEV+TWG+ FG+ G S E P K A E +K
Sbjct: 165 LTSAGEVFTWGYG----------GFGALG---------HSVYTRELFPRLVKGAWEGTIK 205
Query: 179 RRKTSSA---------------REESENPASG------DEFFTLS-PCLVTLNPGVKITK 216
TS A REE E D LS PC V P +
Sbjct: 206 HIATSGAHTAAVTESGDLYIWGREEGEGRLGLGPGRGPDHAGGLSIPCKVKELP-FPVAA 264
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-----KMVPTPHLIPCLEHAASGKDR 271
V+ GG TL L++ GQ+W WG +LG G RI + VP+ + ++ A+ G
Sbjct: 265 VSCGGFFTLALTEEGQLWNWGANSNYELGRGDRIGGWRPRPVPSLEKVRVIQIASGGYHS 324
Query: 272 PLLVRQGSVNSSGKA----------------------GRSYVKEIACGGRHSAVVTD 306
L G V S G ++ I+CGG SA VTD
Sbjct: 325 LALTDDGKVLSWGHGGQGQLGHGSVENQKIPTLVEAIAHEHIIYISCGGASSAAVTD 381
>gi|340509251|gb|EGR34803.1| nd6 protein, putative [Ichthyophthirius multifiliis]
Length = 393
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 47/223 (21%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWREC----VPSAKVTRDFGSAGSFQKDSTGKQ---S 158
+V G+ HC+ +T AGE+Y WG + + S ++ + F + + K+
Sbjct: 125 LVDIKLGFYHCIGLTNAGEIYVWGSNQYGQHGISSQQILAQYKENSRFIRHISSKELTTE 184
Query: 159 ALPT--------EQAPPSDKRAGEEV---VKRRKTSSAREESENPASGDEF---FTLSPC 204
+ PT EQ + G E ++ ++T A ++ G F F P
Sbjct: 185 SFPTLVSFFDIKEQRIVTQIACGAEYCMAIENKRTVYAWGKNTEGQLGLGFVTSFVEQPS 244
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
++ G+ + +V G H+L L+D G+++ G G+LGLG P LI +E+
Sbjct: 245 KLSTFEGLLMKQVECGENHSLFLTDSGKIYTCGSYLYGKLGLGQISNNQIIPQLIKGIEN 304
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
V++IACG HS + +
Sbjct: 305 --------------------------VEKIACGSNHSMALVRL 321
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 70/293 (23%), Positives = 116/293 (39%), Gaps = 62/293 (21%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQ 157
G AH +++ + G+VY WG EC+ +V R+ S Q + + G
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYY 147
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
+L +A + + + ++++ SP L+ G+ +V
Sbjct: 148 HSLALSKASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQV 195
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR- 271
AAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHT 254
Query: 272 PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 73/288 (25%), Positives = 115/288 (39%), Gaps = 66/288 (22%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKARKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECI---RVPRNIKSLSEIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL-SPCLVTLNPGVKITKVAAGGR 222
+ G EV S + + G E+ SP ++ G+ ++AAGG
Sbjct: 154 K--------GSEVF-----SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE-----HAASGKDR-PLLV 275
H+ +L+ G ++GWG GQLGL + VPT L+ L H G+D L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT--LLKSLRTQKVVHICCGEDHTAALT 258
Query: 276 RQGSVNSSGKAGR----------------------SYVKEIACGGRHS 301
++G V + G G S V +I CG +H+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHT 306
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G Y +IA GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
Score = 45.1 bits (105), Expect = 0.047, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 21/206 (10%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG A D GQ L + P +E +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATD-GQLGLPGTEECIRVPRNIKSLSEIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----GKQSALPT 162
A G+ H +++++ EV++WG + +G G ++K ++ +P
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK----------YGQLGLGYEYKKQNSPHVIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + D+ P L+ K+ + G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGS 248
HT L+ G V+ +G GG GQLG S
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS 278
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 73/288 (25%), Positives = 115/288 (39%), Gaps = 66/288 (22%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKARKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECI---RVPRNIKSLSEIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL-SPCLVTLNPGVKITKVAAGGR 222
+ G EV S + + G E+ SP ++ G+ ++AAGG
Sbjct: 154 K--------GSEVF-----SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE-----HAASGKDR-PLLV 275
H+ +L+ G ++GWG GQLGL + VPT L+ L H G+D L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT--LLKSLRTQKVVHICCGEDHTAALT 258
Query: 276 RQGSVNSSGKAGR----------------------SYVKEIACGGRHS 301
++G V + G G S V +I CG +H+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHT 306
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G Y +IA GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
Score = 45.1 bits (105), Expect = 0.047, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 21/206 (10%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG A D GQ L + P +E +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATD-GQLGLPGTEECIRVPRNIKSLSEIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----GKQSALPT 162
A G+ H +++++ EV++WG + +G G ++K ++ +P
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK----------YGQLGLGYEYKKQNSPHVIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + D+ P L+ K+ + G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGS 248
HT L+ G V+ +G GG GQLG S
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS 278
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 73/288 (25%), Positives = 115/288 (39%), Gaps = 66/288 (22%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKARKRPEHVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECI---RVPRNIKSLSEIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL-SPCLVTLNPGVKITKVAAGGR 222
+ G EV S + + G E+ SP ++ G+ ++AAGG
Sbjct: 154 K--------GSEVF-----SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE-----HAASGKDR-PLLV 275
H+ +L+ G ++GWG GQLGL + VPT L+ L H G+D L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPT--LLKSLRTQKVVHICCGEDHTAALT 258
Query: 276 RQGSVNSSGKAGR----------------------SYVKEIACGGRHS 301
++G V + G G S V +I CG +H+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHT 306
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G Y +IA GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
Score = 45.1 bits (105), Expect = 0.047, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 21/206 (10%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKA 109
+++ CG A LA ++ G++ WG A D GQ L + P +E +V+
Sbjct: 84 QNIVAVSCGEAHTLALNDKGQVYAWGLATD-GQLGLPGTEECIRVPRNIKSLSEIQIVQV 142
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDST----GKQSALPT 162
A G+ H +++++ EV++WG + +G G ++K ++ +P
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNK----------YGQLGLGYEYKKQNSPHVIKSLLGIPF 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + R + D+ P L+ K+ + G
Sbjct: 193 AQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGED 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGS 248
HT L+ G V+ +G GG GQLG S
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNS 278
>gi|403350318|gb|EJY74616.1| hypothetical protein OXYTRI_04126 [Oxytricha trifallax]
gi|403370253|gb|EJY84990.1| hypothetical protein OXYTRI_17158 [Oxytricha trifallax]
Length = 1116
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 47/186 (25%)
Query: 84 SYLTSGKHG----ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
++ TS K+G TP+ L V+ + GW H V+ G +TWG E
Sbjct: 109 TFQTSPKNGFEYSNTPKLVELLVNYEVISISCGWNHTACVSIDGLSFTWGQYE------- 161
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
+G G GK S+ +RR SS ++ P S EFF
Sbjct: 162 ---YGQLG------LGKISSQ-----------------QRRNESSVFQQGIFP-SIVEFF 194
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHL 258
+ +KI VA GG+HTL LS GQV+ G GQLG+G + I+ P
Sbjct: 195 QQN--------NIKIVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGIGMQDIQYKDIPTR 246
Query: 259 IPCLEH 264
+P L +
Sbjct: 247 VPSLSN 252
>gi|311260691|ref|XP_001927570.2| PREDICTED: RCC1 domain-containing protein 1 [Sus scrofa]
Length = 385
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 23/189 (12%)
Query: 59 GCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G AL +G++ +WG G L + + E A V AA GW H
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEV--AAGGW-HS 228
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V V+E G++Y WGW E A R G K TG L E+
Sbjct: 229 VCVSETGDIYIWGWNESGQLALPARSLAEDG---KTITGDAPGL------------NEDG 273
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ ++ + + P + F P L+ L G K + G RHT +++ G+++ W
Sbjct: 274 SEAKRATEGEDGGPTPFIAVQPF---PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTW 330
Query: 237 GYGGEGQLG 245
G+G GQLG
Sbjct: 331 GWGKYGQLG 339
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 89 GKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
G+ +PEP +P V + +A W++ +VT G + SA RD ++
Sbjct: 26 GRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRLELS--GSVSGSAGGCRDAWASE 83
Query: 148 SFQ---KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF----FT 200
+ + TG S + P GE + +T E ++ GDE
Sbjct: 84 ALLVVLRAGTGSDSGAELQAWAPGSSLRGEPLWA--QTVVLEVERKDGPGGDETQAGPLP 141
Query: 201 LSPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
L PC L P ++ ++ G H L+L GQV+ WG G GQLG G+
Sbjct: 142 LLPCASAYVSPQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT 200
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 70/293 (23%), Positives = 116/293 (39%), Gaps = 62/293 (21%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQ 157
G AH +++ + G+VY WG EC+ +V R+ S Q + + G
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYY 147
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
+L +A + + + ++++ SP L+ G+ +V
Sbjct: 148 HSLALSKASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQV 195
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR- 271
AAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHT 254
Query: 272 PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V EIACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 79/210 (37%), Gaps = 18/210 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG G L PE +VK A GW H +SV+ +G
Sbjct: 175 AVTEDGELYGWGWGR-YGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG 233
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + L Q + +G TS
Sbjct: 234 LYTYGWSK----------YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSD 283
Query: 185 AR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ + GD SP V K+ ++ G RHTL +++ V+ WG
Sbjct: 284 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 343
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
G GQLG G I P +I L SG
Sbjct: 344 GTNGQLGHGESIDR-NIPKMIEVLSADGSG 372
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 117/311 (37%), Gaps = 88/311 (28%)
Query: 20 TVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
T VY WG + +P P + G K + CG LA + G++ +WG
Sbjct: 88 TQVYSWG---------CDLFTPQPIKALHGLRIKQIA---CGDSHCLAVTMDGEVQSWGR 135
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ GQ L + + P+ SV AAG H +VTE GE+Y WGW
Sbjct: 136 -NQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGR----- 189
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
+G+ G ++ ++ P +K + E VK K + + + +S
Sbjct: 190 -----YGNLGLGDRN----------DRLVP-EKVSTVEGVKMVKVACGWRHTISVSSSGG 233
Query: 198 FFT-----------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+T L+P + I++++ G RHT+ L+ G+++GWG+
Sbjct: 234 LYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNK 293
Query: 241 EGQLGLGSRIK-----MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
GQ+G+G + V PH V I+
Sbjct: 294 FGQVGVGDNVDHCSPVQVKFPH------------------------------EQKVVHIS 323
Query: 296 CGGRHSAVVTD 306
CG RH+ VT+
Sbjct: 324 CGWRHTLAVTE 334
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 19/198 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + +WG +D GQ + +P VV G H +
Sbjct: 24 GASHSVALLXGNVVCSWGRGED-GQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82
Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+E+ +VY+WG F L +Q D +
Sbjct: 83 YSESFTQVYSWG----------------CDLFTPQPIKALHGLRIKQIACGDSHCLAVTM 126
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
S R ++ G +L P + GV + VAAG HT +++ G+++GWG
Sbjct: 127 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWG 186
Query: 238 YGGEGQLGLGSRI-KMVP 254
+G G LGLG R ++VP
Sbjct: 187 WGRYGNLGLGDRNDRLVP 204
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P P E VV + GW H +
Sbjct: 272 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 330
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 331 AVTERQNVFSWG 342
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 83/218 (38%), Gaps = 26/218 (11%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+P L G V G +LA + +G ++ WG +D GQ + TP
Sbjct: 80 TPLPVSLPAGTDATAVVAGDF-HSLALTSAGTVLAWGR-NDSGQLGDGTTVSSSTPVVVR 137
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG+ H +++T G V WG + FG G D T S+
Sbjct: 138 LPVGVTVTAVAAGFGHSLALTSTGVVLAWG----------SNSFGQLG----DGTTVSSS 183
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF-------FTLS---PCLVTLN 209
P P + + A G+ F T+S P V L
Sbjct: 184 TPVAVRLPVGVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGTTVSSSTPVAVRLP 243
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
G +T VA G H+L L+ G WG GQLG G
Sbjct: 244 VGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDG 281
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 85/214 (39%), Gaps = 14/214 (6%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ RL G + V G G +LA + +G ++ WGS + GQ + TP
Sbjct: 132 TPVVVRLPVGVTVTAVAAG-FGHSLALTSTGVVLAWGS-NSFGQLGDGTTVSSSTPVAVR 189
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG H +++T G WG + G G+ ST
Sbjct: 190 LPVGVTVTAVAAGSGHSLALTSVGAALAWG-------NNFSGQLGD-GTTVSSSTPVAVR 241
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAR----EESENPASGDEFFTLSPCLVTLNPGVKIT 215
LP + + +A S G + +P +V+L G +T
Sbjct: 242 LPVGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVT 301
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+A G H++ L+ G WG G+GQLG G+
Sbjct: 302 ALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTN 335
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R +S G + +P +V L GV +T VAAG H+L L+ G V WG GQLG
Sbjct: 116 RNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTGVVLAWGSNSFGQLG 175
Query: 246 LGSRIK 251
G+ +
Sbjct: 176 DGTTVS 181
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+P V+L G T V AG H+L L+ G V WG GQLG G+ +
Sbjct: 80 TPLPVSLPAGTDATAVVAGDFHSLALTSAGTVLAWGRNDSGQLGDGTTVS 129
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V EIACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|393202066|ref|YP_006463908.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
gi|327441397|dbj|BAK17762.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
Length = 797
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 116/303 (38%), Gaps = 65/303 (21%)
Query: 44 ARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPT 102
A G + +DV G + E G + WG SY G +G T P P+
Sbjct: 28 AEAYGVTNHEDVVDVGKNHFIVLKEDGSVWGWGD-----HSYGQLGANGSNTSSPIPIQK 82
Query: 103 E-----ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
++ AAG H V++ GEV+TWG + + + +A SF
Sbjct: 83 ADGNRLLNIKAIAAGSNHTVALDRNGEVWTWG-----RNNQGQLGYTTANSF-------- 129
Query: 158 SALPTEQAPPSDK----RAGEEVVKRRKTSSAREESENPASGDEFF-----TLSPCLVTL 208
S LP + + K AGE T + E + A G + +P L +
Sbjct: 130 SNLPAKVTGITSKIIAISAGE-----YHTLAVDENGQVWAWGRNDYGQIGTDCNPALAHV 184
Query: 209 NP-GVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-- 264
GV I VAAG H++ L G VW WG GQLG G + P +P L +
Sbjct: 185 QVCGVSGIIAVAAGDNHSVALKSDGTVWAWGRNTVGQLGNGETTDINTNPTAVPGLSNIV 244
Query: 265 -AASGKDRPLLVRQGS-------VNSSGKA---------------GRSYVKEIACGGRHS 301
++G + L ++Q S NSSG+ G + VK IA G HS
Sbjct: 245 DISAGANHTLALKQDSTSIYAWGFNSSGQLGDGGLESKLRPIQVEGMNKVKTIAAGNNHS 304
Query: 302 AVV 304
+
Sbjct: 305 IAI 307
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 119/314 (37%), Gaps = 82/314 (26%)
Query: 20 TVVYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
T VY WG+ S + +P P + G K + CG LA + G++ +
Sbjct: 88 TQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIA---CGDSHCLAVTMDGEVQS 144
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WG + GQ L + + P+ SV AAG H +VTE GE+Y WGW
Sbjct: 145 WGR-NQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGR-- 201
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
+G+ G ++ ++ P +K + E VK K + + + +S
Sbjct: 202 --------YGNLGLGDRN----------DRLVP-EKVSTVEGVKMVKVACGWRHTISVSS 242
Query: 195 GDEFFT-----------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+T L+P + I++++ G RHT+ L+ G+++GWG
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWG 302
Query: 238 YGGEGQLGLGSRIK-----MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
+ GQ+G+G + V PH V
Sbjct: 303 WNKFGQVGVGDNVDHCSPVQVKFPH------------------------------EQKVV 332
Query: 293 EIACGGRHSAVVTD 306
I+CG RH+ VT+
Sbjct: 333 HISCGWRHTLAVTE 346
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 79/210 (37%), Gaps = 18/210 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG G L PE +VK A GW H +SV+ +G
Sbjct: 187 AVTEDGELYGWGWGR-YGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG 245
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + L Q + +G TS
Sbjct: 246 LYTYGWSK----------YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSD 295
Query: 185 AR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ + GD SP V K+ ++ G RHTL +++ V+ WG
Sbjct: 296 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGR 355
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
G GQLG G I P +I L SG
Sbjct: 356 GTNGQLGHGESIDR-NIPKMIEVLSADGSG 384
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 80/204 (39%), Gaps = 19/204 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + +WG +D GQ + +P VV G H +
Sbjct: 24 GASHSVALLSGNVVCSWGRGED-GQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTA 82
Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKR 171
+E+ +VY+WGW DFG G F L +Q D
Sbjct: 83 YSESFTQVYSWGWG----------DFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSH 132
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ S R ++ G +L P + GV + VAAG HT +++ G
Sbjct: 133 CLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDG 192
Query: 232 QVWGWGYGGEGQLGLGSRI-KMVP 254
+++GWG+G G LGLG R ++VP
Sbjct: 193 ELYGWGWGRYGNLGLGDRNDRLVP 216
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P P E VV + GW H +
Sbjct: 284 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTL 342
Query: 118 SVTEAGEVYTWG 129
+VTE V++WG
Sbjct: 343 AVTERQNVFSWG 354
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 53/261 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A ++ G+L WG EGQ L G + P L T+ V+ A G+ H
Sbjct: 147 GADHSVALTDDGELYVWGGGS-EGQ--LGLGDIDDKSTPTLLSTDNKVISVACGYYHTAF 203
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GE 174
VT+ GEV+T+G G G + + ++ P + P ++ G
Sbjct: 204 VTDVGEVFTFGE-------------GDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGS 250
Query: 175 EVVKRRKTSSAREESE--NPASGDE---FFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
V + E N G + F+ +P V LN K+T++AAG HT ++++
Sbjct: 251 HTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETP--VWLNFKHKVTQIAAGENHTALVTE 308
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
GQ++ +G G +LGL D Q S + +
Sbjct: 309 KGQLYTFGDGRHAKLGL-----------------------DHECYSNQYFPQRSKRFSKF 345
Query: 290 YVKEIACGGRHSAVVTDMSYP 310
V +++CGG H V ++YP
Sbjct: 346 IVTQVSCGGCHMIV---LAYP 363
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 92/259 (35%), Gaps = 86/259 (33%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
GD K V G AL T ESG+L T+G +D GQ + K P V
Sbjct: 35 GDKAKSVACGDEHTALVT-ESGRLFTFG-VNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
A G H + TE+G +YT FG+ G Q L E P S
Sbjct: 93 VACGRIHTIVATESGCLYT---------------FGANGDGQ---------LGVEDIPSS 128
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ P V P + +AAG H++ L+
Sbjct: 129 N--------------------------------CPVKVECEP-RQYKALAAGADHSVALT 155
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
D G+++ WG G EGQLGLG I TP L+ +
Sbjct: 156 DDGELYVWGGGSEGQLGLGD-IDDKSTPTLL--------------------------STD 188
Query: 289 SYVKEIACGGRHSAVVTDM 307
+ V +ACG H+A VTD+
Sbjct: 189 NKVISVACGYYHTAFVTDV 207
>gi|384489724|gb|EIE80946.1| hypothetical protein RO3G_05651 [Rhizopus delemar RA 99-880]
Length = 427
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 59/205 (28%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P + + DV GG + A + G L +WG D EG G+ G+ EP +
Sbjct: 70 PVPIKSVIDIDFVDVISGGL-HSFAMTPEGSLFSWGCTD-EG----VLGREGKNDEPVKI 123
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
E + VK AG +++T+ G +YTWG G+ G+F T Q +
Sbjct: 124 EIEETFVKVVAGDCINMALTKDGNLYTWGTYR-----------GADGAFGFSPTLSQQST 172
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
P SS +E+ I + G
Sbjct: 173 PL------------------LFSSLSKET------------------------IVDITTG 190
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLG 245
H+L LS G+++ WGYG +GQLG
Sbjct: 191 TNHSLALSADGRLFTWGYGEQGQLG 215
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 16/136 (11%)
Query: 13 KMEECKETVVYMWGYLPGT------SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
M K+ +Y WG G SP S +P+ ++ D+ G +LA
Sbjct: 139 NMALTKDGNLYTWGTYRGADGAFGFSPTLSQQSTPLLFSSLSKETIVDITTG-TNHSLAL 197
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETP---EPFPLPTEASVVKAAAGWAHCVSVTEAG 123
S G+L TWG + S +H + EP L +V AG H ++VT
Sbjct: 198 SADGRLFTWGYGEQGQLGRRISSRHPKDSLRCEPLSL---KNVKLIGAGSYHSLAVTHDN 254
Query: 124 EVYTWG---WRECVPS 136
++Y WG +R+C S
Sbjct: 255 QLYAWGLNNFRQCANS 270
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 29/199 (14%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVT 120
L +E G+L WG G S L +G + P + V + A G H +++T
Sbjct: 88 LLATEDGELFAWGH---NGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALT 144
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+ GEVY WG+ C G GS ST Q + +K A V +
Sbjct: 145 DTGEVYAWGYNNC----------GQVGS---GSTANQPTPRRVSSCLQNKVAVSIVCGQT 191
Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + E G+ ++PC + G+ + ++ +G H++ L+D
Sbjct: 192 SSLAVVDNGEVYGWGYNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDE 251
Query: 231 GQVWGWGYGGEGQLGLGSR 249
G ++ WG GQLG G++
Sbjct: 252 GLLYAWGANTYGQLGTGNK 270
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P LV+ N K+T+VA G H++ L+D G+V+ WGY GQ+G GS PTP +
Sbjct: 116 VAPVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLEHAAS 267
CL++ +
Sbjct: 175 SSCLQNKVA 183
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 25/114 (21%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G K+ ++ G G H L+ ++ G+++ WG+ G QLG G+ +
Sbjct: 56 TGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
V P+LV +N V E+ACG HS +TD
Sbjct: 116 VA-----------------PVLVSANLLNKK-------VTEVACGSHHSMALTD 145
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFP 99
LCG +DVC CG F+LA S +GK+ TWG D Y G H +P+
Sbjct: 3111 LCG----RDVCRIACGAQFSLALSTTGKVWTWGKGD-----YYRLGHGNDSHYRSPQLIE 3161
Query: 100 LPTEAS-VVKAAAGWAHCVSVTEAGEVYTWG 129
P + + + A G HC++VT+ GEVY+WG
Sbjct: 3162 GPLKKKRITEIAVGALHCLAVTDTGEVYSWG 3192
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F++A +++G L TWG D + T+ H P +V AAG
Sbjct: 4017 VCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTN-DHVRRPRKVACLQGKQIVTVAAG 4075
Query: 113 WAHCVSVTEAGEVYTWG 129
HCV+ T+AGEV+TWG
Sbjct: 4076 SLHCVACTDAGEVFTWG 4092
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V GGRH+L ++ G+V+ WG G +G+LG G + +P LI LE
Sbjct: 2956 VKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRL-SPTLIEALE-------- 3006
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ EIACG HSA VT
Sbjct: 3007 ----------------SKLIVEIACGSSHSAAVT 3024
Score = 46.2 bits (108), Expect = 0.022, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G +I VAAG H + +D G+V+ WG EGQLG G+ + +P P L+ LE+
Sbjct: 4066 GKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGT-LNPIPEPTLVTVLEN 4118
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 27/107 (25%)
Query: 201 LSPCLVTLNPGVKITK--VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
++P ++ +KI K V +GGRH ++L+ +V+ WG G +G+LG G ++ TP
Sbjct: 3844 VTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS-ETPRK 3902
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
I LL +Q + I+CG HSA +T
Sbjct: 3903 I-----------EALLGKQ-------------IVHISCGSSHSAAIT 3925
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + G + TWG +D + T H P+ +V A G +HC++
Sbjct: 679 GSQFSVALGKDGTVWTWGKSDGYRLGHGTL-DHVRYPKMVEGLINYHIVDIAVGPSHCLA 737
Query: 119 VTEAGEVYTWG 129
+T+ +++TWG
Sbjct: 738 LTDNCQIFTWG 748
Score = 37.4 bits (85), Expect = 7.8, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 201 LSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L P LV G + VA +G HTL + G VW WG G G+LG G P +
Sbjct: 604 LLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGS-DCCKVPKV 662
Query: 259 IPCLEH 264
+ L+H
Sbjct: 663 VETLKH 668
Score = 37.4 bits (85), Expect = 9.6, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+IT++A G H L ++D G+V+ WG GQ G G+
Sbjct: 3168 RITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGN 3203
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 97/237 (40%), Gaps = 38/237 (16%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S I+ LCG G G L T E G++ WG G S L +G
Sbjct: 61 GTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCT-EDGEVYAWG---HNGYSQLGNG 116
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T VV+ A G H ++++ G++Y WG+ C G
Sbjct: 117 TTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNC----------GQV 166
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASG--------- 195
GS ST Q PT + S+ G+ VV +TSS + G
Sbjct: 167 GS---GSTANQ---PTPR-RVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQL 219
Query: 196 ---DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ L+PC V V + ++A G HTL L+D G ++ WG GQLG G++
Sbjct: 220 GLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNK 276
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
+Y WGY G S P P R+ K V G CG ++A +G++ WG
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGY- 213
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + TP V++ A G+AH +++T+ G +Y WG
Sbjct: 214 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWG--------- 264
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
A ++ + TG +S + +P E VV+ SA + SG +
Sbjct: 265 -------ANTYGQLGTGNKS---NQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVY 314
Query: 199 F 199
Sbjct: 315 M 315
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H++ LS G ++ WGY GQ+G GS PTP +
Sbjct: 122 ITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQ-PTPRRV 180
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL+ A G+ + +V G V N +G+ G
Sbjct: 181 SNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVC 240
Query: 291 VKEIACGGRHSAVVTD 306
V +IACG H+ +TD
Sbjct: 241 VLQIACGYAHTLALTD 256
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 115/307 (37%), Gaps = 71/307 (23%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
VY WG L TS + PIL L + + CG G L ++ GK+ T
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPILVE---ALQDRQTVQISCGSGHTVVL--TDDGKVYT 57
Query: 75 WGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG DD L G +G P + V + G H +VT +GE+YTWG
Sbjct: 58 WGRGDD---GRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWG--- 111
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--RAGEEVVKRRKTSSARE--- 187
G + K G ++ T S K + R T E
Sbjct: 112 -------------GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQD 158
Query: 188 -----ESENPASGD---EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ EN SG SP V+ + I +++A G HT LS+ GQV+ +G G
Sbjct: 159 VYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEG 218
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
G+LG S + P I L GK +K++ACGG
Sbjct: 219 KFGRLGHNSE-RNQPVAKCIDAL--------------------IGKR----IKQVACGGF 253
Query: 300 HSAVVTD 306
H+A VT+
Sbjct: 254 HTAAVTE 260
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
+G L S P+ I A + G K V GG A A +ESG + TWG + GQ
Sbjct: 220 FGRLGHNSERNQPVAKCIDALI--GKRIKQVACGGFHTA-AVTESGHVFTWGGGE-HGQL 275
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ P + ++++ GW+H V++T+ GEV+TWG
Sbjct: 276 GHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWG 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 35/207 (16%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A + SG+L TWG G Y G E P E+ V + A G H V +
Sbjct: 100 AVTVSGELYTWG-----GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLL 154
Query: 121 EAGEVYTWGWRECVPSAK-----------VTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
E +VYTWG +E S + Q + G +A +E
Sbjct: 155 ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVF- 213
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
GE R +S R + ++ C+ L G +I +VA GG HT +++
Sbjct: 214 -TFGEGKFGRLGHNSERNQP-----------VAKCIDAL-IGKRIKQVACGGFHTAAVTE 260
Query: 230 MGQVWGWGYGGEGQLGLGSRI-KMVPT 255
G V+ WG G GQLG G ++ +++PT
Sbjct: 261 SGHVFTWGGGEHGQLGHGDKVNQIIPT 287
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 25/206 (12%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
E+ + TWG ++ + + H +P E ++ + +A H +++E G+V+T
Sbjct: 155 ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFT 214
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
+G G G +S Q A KR + T++ E
Sbjct: 215 FGE-------------GKFGRLGHNSERNQPVAKCIDALIG-KRIKQVACGGFHTAAVTE 260
Query: 188 ----------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
E GD+ + P V I ++ G HT+ L+D G+V+ WG
Sbjct: 261 SGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWG 320
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLE 263
G G+LG K V P LI
Sbjct: 321 NGDHGKLGHNDTNK-VTEPKLIETFN 345
>gi|307190578|gb|EFN74560.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1036
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 32/204 (15%)
Query: 88 SGKHGETPEPFPLPTEASVVKA-----------AAGWAHCVSVTEAGEVYTWGWRECVPS 136
S K G+ P +P E++ K A G HC+++T G+VYTWG C
Sbjct: 585 SCKVGDWPHGLHIPKESTFTKVPRLEKKYILDIACGHCHCLALTSDGKVYTWGENYC--- 641
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE----VVKRRKTSSAREESENP 192
++ + G+ +F DS +Q E+ G + + K + +
Sbjct: 642 GQI--EDGNIDTF--DSVPRQVHHELEKKNVVHIACGSKFNVVITDENKIYGWGKNDKGQ 697
Query: 193 AS---GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
S ++++ ++T++ KI KV G HTL L++ G+++ WG GQ+G+ +
Sbjct: 698 ISIVQSEKYYAYPQEIITISD--KIVKVTCGYDHTLALTNKGEIYAWGDNIYGQIGVNKK 755
Query: 250 IK-----MVPTPHLIPCLEHAASG 268
+K MV P + L+ AA G
Sbjct: 756 LKRSGPIMVNVPEMGKVLDIAAFG 779
Score = 44.3 bits (103), Expect = 0.077, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 22 VYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
VY WG Y +P ++ K+V CG F + ++ K+ WG
Sbjct: 633 VYTWGENYCGQIEDGNIDTFDSVPRQVHHELEKKNVVHIACGSKFNVVITDENKIYGWGK 692
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D S + S K+ P+ + +VK G+ H +++T GE+Y WG
Sbjct: 693 NDKGQISIVQSEKYYAYPQEI-ITISDKIVKVTCGYDHTLALTNKGEIYAWG 743
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 75/291 (25%), Positives = 117/291 (40%), Gaps = 58/291 (19%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGW----RECVPSA----KVTRDFGSAGSFQ--KDSTGKQSAL 160
G AH +++ + G+VY WG + +P +V R+ S Q + + G +L
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSL 150
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAA 219
+ G EV S + + G E SP L+ G+ T+VAA
Sbjct: 151 ALSK--------GSEVF-----SWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAA 197
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PL 273
GG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 274 LVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 45.1 bits (105), Expect = 0.044, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G + ++A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
>gi|389742932|gb|EIM84118.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
Length = 471
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 81/210 (38%), Gaps = 54/210 (25%)
Query: 62 FALATSESGKLITWGSAD-DEGQSYLTSGKHG-ETPEPFPLPTEA-----SVVKAAAGWA 114
ALA G+L WG +EG T+G G ++ P+P PT A + A G
Sbjct: 131 LALALDAEGQLRQWGMFKMNEG----TTGFDGIKSSAPYPTPTPAFPKKTEISNVACGSN 186
Query: 115 HCVSVTEAGEVYTWGW------------------RECVPSAKVTRDFGSAG-----SFQK 151
H +++T +G VYTWG R VP A R+ + G SF
Sbjct: 187 HVLALTTSGHVYTWGSNREFQLGRKVLSRNRKVDRAYVPEALHLRNIVAVGASSCTSFAV 246
Query: 152 DSTGKQ---SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
D G A Q SD+R GEE V T SE
Sbjct: 247 DHQGVVFAWGANNLRQTGISDQRGGEESVISTPTIVDALASER----------------- 289
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ G K+ ++ G HTL L D GQVWG G
Sbjct: 290 HGGSKVIQIEGGSDHTLFLFDNGQVWGCGL 319
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
T P L+P VKITK+A+ GR L + G ++ WG G QLGLG
Sbjct: 379 LTFPPVSDELHP-VKITKIASSGRCNLAVDVHGHLYAWGEGNSCQLGLGD 427
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 106/291 (36%), Gaps = 60/291 (20%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCL 104
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTGKQSALPTEQAPPSDKRAGEEV 176
+V + G Y WG E +G G KD TG+ P + KR +++
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGR----PVRRDIVIPKRCAQQL 150
Query: 177 VKRR----KTSSAREESENPA--------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
R+ T S E GD P V V++ +A G H
Sbjct: 151 TVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRL--IAVGAFHN 208
Query: 225 LILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGS 279
L L + G +W WG GQLG G R +P L + ++ AA G L +G
Sbjct: 209 LALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGE 268
Query: 280 VNSSGK-------------------------AGRSYVKEIACGGRHSAVVT 305
V G+ AG + +++CGG HS +T
Sbjct: 269 VYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII-QVSCGGTHSVALT 318
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM--- 252
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 286 DKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSY 309
+ P IP E + D G+ K +ACGGRH+ + + Y
Sbjct: 346 LELPIHIPPPEGRFNHTDEE------------DDGKWIAKHVACGGRHTLAIVEWKY 390
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV VKI + A GG H L + D G+ + WG GQ G
Sbjct: 81 TPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG---------------- 124
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSY 309
E + RP VR+ V A + V+++A GG HS V+T Y
Sbjct: 125 EEPSKDETGRP--VRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGY 170
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 108/279 (38%), Gaps = 50/279 (17%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P+ ++ + +
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTNCLHVK 181
Query: 180 RKTSSAREESENPASGD--EFF-----------------TLSPCLVTLNPGVKITKVAAG 220
R A ++ + A D E + L+P V V + ++ G
Sbjct: 182 RVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCG 241
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
HTL L+D G ++ WG GQLG G++ ++ H++
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPEHIM 280
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA S+ G+L +WG+ D +T+ P + ++++ + G HC+++
Sbjct: 96 SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 155
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G+ +TWG + + ++F S S Q+ + +P Q + +
Sbjct: 156 GQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALSLSGAVF 212
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
+ DE SPC V L K+ ++ G HT +L+ G V+ +G G G
Sbjct: 213 GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272
Query: 243 QLG 245
QLG
Sbjct: 273 QLG 275
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 55/252 (21%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITW 75
+ WGY P S L I A ++CG S + V CGG ++ E G++ T
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGN--HSVFLLEDGEVYTC 58
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G + +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 59 G-LNTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG------ 109
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENP 192
S G+ + TE + P ++ ++ + + S
Sbjct: 110 ---------------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLAL 152
Query: 193 ASGDEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
A+ +FFT SP V G+ + +VAAGG H+ LS G V+
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212
Query: 235 GWGYGGEGQLGL 246
GWG GQLGL
Sbjct: 213 GWGMNNAGQLGL 224
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 85 HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 75/291 (25%), Positives = 117/291 (40%), Gaps = 58/291 (19%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGW----RECVPSA----KVTRDFGSAGSFQ--KDSTGKQSAL 160
G AH +++ + G+VY WG + +P +V R+ S Q + + G +L
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSL 150
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAA 219
+ G EV S + + G E SP L+ G+ T+VAA
Sbjct: 151 ALSK--------GSEVF-----SWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAA 197
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PL 273
GG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 274 LVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 45.1 bits (105), Expect = 0.044, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G + ++A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 612
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 28/221 (12%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAH 115
CG+ ++A + +G ++ WG D S L G + +P +P +++ + G H
Sbjct: 181 CGYQHSVAITFNGNVLVWG---DNSSSQLGLGINSPNSIYYPVQIPNIQNIINVSCGSEH 237
Query: 116 CVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+++ +VY+WG E S K+ F G S T
Sbjct: 238 TLALDNRNQVYSWGNGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALT--- 294
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN-PGVKITKVAAGGRHT 224
+ G R +++ + +F P + GV + ++AAG H+
Sbjct: 295 -----KKGHVYSWGRNEGGQLGLNQDVLKDNLYFCCLPEKICGQLEGVFVKQIAAGDAHS 349
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLE 263
L L+ GQV+GWGY GQLGLG + K V P I L+
Sbjct: 350 LALAQNGQVFGWGYNINGQLGLGQQQSDKQVSEPKQIKNLQ 390
>gi|237830541|ref|XP_002364568.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211962232|gb|EEA97427.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
Length = 862
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +++ V++ +V G +H L LSD G+V+ +G G GQLGLG ++V P +
Sbjct: 155 LQPVVISALANVRVVEVCVGEQHALFLSDAGEVFAYGQGIYGQLGLGYERQVVHLPQKV- 213
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G R V++IACG HS VT
Sbjct: 214 ----------------------EGALSRFPVRQIACGDYHSVAVT 236
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 84/212 (39%), Gaps = 50/212 (23%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ- 164
V + A G H V+VT G V+ WG +CV D +G P
Sbjct: 222 VRQIACGDYHSVAVTREGAVFAWGAADCV----------------GDGSGLCRFAPVRLS 265
Query: 165 --APPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFF-----TLSPCLVTLNPGVKITK 216
A P D A + R + ++A ES G+ FF T V P + +
Sbjct: 266 LGASPGD--ACRVIAARFQQTAAVSESGRLLVWGETFFADFHATPEVLCVFFRP---VVQ 320
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
VA G L+L+D GQV+GWG G G+L M P P + +SG+ P +V
Sbjct: 321 VAIGKHFGLVLTDDGQVYGWGDGTYGELTTAG--PMAPKTLPEPLILKDSSGQSLPPVV- 377
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVT-DM 307
EIA G RH+ ++T DM
Sbjct: 378 ----------------EIATGTRHAILLTHDM 393
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 73/288 (25%), Positives = 114/288 (39%), Gaps = 64/288 (22%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGR 222
+A EV S + + G D SP L+ G+ +VAAGG
Sbjct: 154 KA--------SEVF-----SWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGA 200
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVR 276
H+ +L+ G ++GWG GQLGL P+L+ L + G+D L +
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTK 259
Query: 277 QGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
+G V + G G S V +IACG +H++
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
Length = 392
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 14/221 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+ + SP+ + ++ + + G +I +G+ D +S G+T
Sbjct: 16 ASLFSPVASHAQDSFNYDHLLSADNNRTFMVKKDGSVI-YGTGSDANGGLGSSSVKGKTT 74
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P P+ + V+ G +H V++ + G V+TWGW +G G+ + ST
Sbjct: 75 SPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSA----------YGELGNEKAKSTE 124
Query: 156 KQSALPTEQAPPSDKRAGEEV---VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
K + RAGE +K T A ++ + GD V ++
Sbjct: 125 KTPHHVKWLSDVKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLT 184
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
I + AG +L LS+ G VW WG GQLG G+R K +
Sbjct: 185 DIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKAL 225
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 35/208 (16%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F+LA SE G + WG+ + GQ L +G + +P + V+ + G +VT
Sbjct: 195 FSLALSEDGTVWAWGN-NSVGQ--LGNGTREKALQPVQVSELTDVIAISTGEKQGYAVTS 251
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G+VY WG+ + G G D T K S P D A + ++
Sbjct: 252 NGDVYGWGYNQ-----------GKLG----DGTKKSSNSPVLIDGIYDVIAVDS--GKQH 294
Query: 182 TSSAREESENPASGDEF-----------FTLSPCLVTLN---PGVKITKVAAGGRHTLIL 227
T + +E+ A G ++++P V L P +I + AGG H+ +
Sbjct: 295 TLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAI 354
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
G VW WG+ G+LGLG S+ +M P
Sbjct: 355 KKDGTVWSWGFNSNGELGLGHSKKQMYP 382
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 79/202 (39%), Gaps = 14/202 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F LA E G + +G + GQ L G +P + +V AG ++
Sbjct: 142 GENFTLALKEDGTVWAFGK-NRSGQ--LGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLA 198
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
++E G V+ WG TR+ + + S L A + ++ G V
Sbjct: 199 LSEDGTVWAWGNNSVGQLGNGTRE-------KALQPVQVSELTDVIAISTGEKQGYAVTS 251
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWG 237
G + + SP L+ G+ + V +G +HTL L + G VW WG
Sbjct: 252 NGDVYGWGYNQGKLGDGTKKSSNSPVLI---DGIYDVIAVDSGKQHTLALKEDGTVWAWG 308
Query: 238 YGGEGQLGLGSRIKMVPTPHLI 259
GQLG G+ + TP+ +
Sbjct: 309 TNTHGQLGYGTPVNYSMTPNQV 330
>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 91/221 (41%), Gaps = 17/221 (7%)
Query: 44 ARLCGGDSWKDVCGG-GCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLP 101
AR+ ++ V G G F++ +GK+ TWG + GQ L G+ ET P P
Sbjct: 77 ARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGE-RGQ--LGLGREAMETGSRVPRP 133
Query: 102 TE----ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS--FQKDSTG 155
+ A V+ A G HC+++T G V++WG E F S S D G
Sbjct: 134 VKGLGNAFVISVACGTRHCLALTRDGRVFSWG--EGADGQLGDGQFVSRHSPEVIADLRG 191
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
K + S G + V ++S + GD P LV G ++
Sbjct: 192 KGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQ----LGVGDTTARFRPTLVRFLDGKQVC 247
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
V AG HTL + G ++ WG GQLGLGS V P
Sbjct: 248 HVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEADSVAAP 288
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 27/108 (25%)
Query: 199 FTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
+ ++P LV LN +K+ V +GGRH L LS G+V+ WG G +G+LGLG+R+ H
Sbjct: 3620 YVVTPQLVQGLNNIIKVA-VNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVT-----H 3673
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L + S K + +IACGG HSA ++
Sbjct: 3674 SKPQLVQSLSDK--------------------CIIDIACGGFHSAAIS 3701
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 111/287 (38%), Gaps = 60/287 (20%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP + P LS + S G A+A S GK+++WG +D GK
Sbjct: 2667 SSPRQIPGLSQFVIKTVAVHS-------GGKHAMALSLDGKVLSWGDGED--------GK 2711
Query: 91 --HGE-----TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
HG+ TP+ V A G AH ++T GE+YTWG + +
Sbjct: 2712 LGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQ----------Y 2761
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP--ASGDEFF-- 199
G G D + + P K + R + +SE + GD F
Sbjct: 2762 GRLG--HSDEVSQHT--PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGK 2817
Query: 200 --------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+P V G ++ ++ G + ++ L+ GQVW WG G +LGLG R +
Sbjct: 2818 LGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLG-RGE 2876
Query: 252 MVPTPHLIPCL-----EHAASGKDRPLLVR-QGSV-----NSSGKAG 287
V P L+ L +H A G + V QG V N G+ G
Sbjct: 2877 HVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQG 2923
Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A S +G L TWG D + S +H P+P +V+ + G H ++
Sbjct: 3799 GSQFSVALSANGTLYTWGKGDYFRLGH-GSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLA 3857
Query: 119 VTEAGEVYTWG 129
+T+ GEVY WG
Sbjct: 3858 LTDDGEVYAWG 3868
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 32/107 (29%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G KI + + G H L L+D G+V+ WG EGQLG G T H I +
Sbjct: 3842 GKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDG-------TAHPI--------ARP 3886
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-------AVVTDMSYP 310
RP+ +G +++++CG HS A TD S P
Sbjct: 3887 RPIAALKG----------KRIQQVSCGSAHSFAWASEEACHTDNSTP 3923
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H + LS G+V WG G +G+LG G I + TP LI L
Sbjct: 2680 IKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGD-ILTLDTPKLIDSL--------- 2729
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
A R + IACG HSA +T
Sbjct: 2730 -------------LAKRVFY--IACGSAHSAAIT 2748
Score = 42.0 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 64 LATSESGKLITWG----SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSV 119
LA ++ G++ +WG A GQ Y + TPEP ++ VV + G C +V
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSF----PTPEPIVAFSKLIVVMVSCGKDFCAAV 560
Query: 120 TEAGEVYTWG 129
TE G++Y WG
Sbjct: 561 TEDGKLYMWG 570
Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S +G++ WG DD G+ L + P+ ++ ++ A G H +++ G
Sbjct: 3646 LALSTTGEVYAWGDGDD-GKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYG 3704
Query: 124 EVYTWG 129
+YTWG
Sbjct: 3705 HLYTWG 3710
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 55/249 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 83 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 139
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 140 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 188
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AGS G+ + TE + P ++ ++ + + S A+
Sbjct: 189 -------AGS-----DGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 234
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 235 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 294
Query: 238 YGGEGQLGL 246
GQLGL
Sbjct: 295 MNNAGQLGL 303
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 165 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 215
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 75/291 (25%), Positives = 117/291 (40%), Gaps = 58/291 (19%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGW----RECVPSA----KVTRDFGSAGSFQ--KDSTGKQSAL 160
G AH +++ + G+VY WG + +P KV R+ S Q + + G +L
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSL 150
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PCLVTLNPGVKITKVAA 219
+ G EV S + + G E + S P L+ G+ +VAA
Sbjct: 151 ALSK--------GSEVF-----SWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAA 197
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PL 273
GG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 274 LVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 45.4 bits (106), Expect = 0.036, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G + ++A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 75/291 (25%), Positives = 117/291 (40%), Gaps = 58/291 (19%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGW----RECVPSA----KVTRDFGSAGSFQ--KDSTGKQSAL 160
G AH +++ + G+VY WG + +P KV R+ S Q + + G +L
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSL 150
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PCLVTLNPGVKITKVAA 219
+ G EV S + + G E + S P L+ G+ +VAA
Sbjct: 151 ALSK--------GSEVF-----SWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAA 197
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PL 273
GG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 274 LVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 45.4 bits (106), Expect = 0.036, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G + ++A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 93/256 (36%), Gaps = 84/256 (32%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E P T+ +++ +
Sbjct: 78 DLVSCGKEHSLAVCYKGRVFAWG-AGSEGQ--LGIGEFNEINLIPRKIKTLTDIKIIQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H ++++E G ++TW GS G P++ +P
Sbjct: 135 CGHHHSLALSEDGRLFTW------------------GSNSHGQLGLGKECPSQASPQR-- 174
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
V G+ +T+VAAGG H+ LS
Sbjct: 175 -----------------------------------VQFLDGIPLTQVAAGGAHSFALSLS 199
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLI-PCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G +GWG EGQL L R K VP PC SV++ G
Sbjct: 200 GASFGWGSNSEGQLAL--RKKNVPVVQSSKPC-----------------SVDALENLGVV 240
Query: 290 YVKEIACGGRHSAVVT 305
Y I+CG H+AV+T
Sbjct: 241 Y---ISCGYEHTAVLT 253
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP 254
P L TL ++ V+ G H+L + G+V+ WG G EGQLG+G + I ++P
Sbjct: 70 PALETL----RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIP 119
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 107/285 (37%), Gaps = 53/285 (18%)
Query: 22 VYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
VY WG+ + S +L P P + G + + G LA + ++++WG
Sbjct: 88 VYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDS-HCLAVTMDSQVLSWGR- 145
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-------- 130
+ G+ L + + P+ + E + AAG H V++T+ G +Y WGW
Sbjct: 146 NQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGL 205
Query: 131 ---RECVPSAKVTRD----------------FGSAGSFQKDSTGKQSAL----------P 161
+ + KVT D S+G + GK L P
Sbjct: 206 GDRNDRLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVP 265
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPG 211
+ SDK + R + + + G+ F SP V
Sbjct: 266 RKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHD 325
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
K+ ++ G RHT+ +++ V+ WG G GQLG G I + VPT
Sbjct: 326 QKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPT 370
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 110/273 (40%), Gaps = 47/273 (17%)
Query: 42 IPARLCGGDSWKDVC-GGGCGFALATSESGK-LITWGSADDEGQSYLTSGKHGETPEPFP 99
P +L D +C G +A SESG+ + +WG D L G H + P P
Sbjct: 56 FPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGD---FGRLGHGDHSDLLIPHP 112
Query: 100 LPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ ++ + A G +HC++VT +V +WG + G+A +DS Q
Sbjct: 113 IKALQGLMIQQIACGDSHCLAVTMDSQVLSWG-----RNQNGELGLGTA----EDSLLPQ 163
Query: 158 SALPTEQAPPSDKRAG-EEVVKRRKTSSARE----ESENPASGDEFFTLSPCLVTLNPGV 212
E+ P AG E V K + N GD L P VT++ G
Sbjct: 164 KIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVD-GD 222
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ VA G RHT+ +S G ++ G+G GQLG G HL+P A S K
Sbjct: 223 KMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDF-----EDHLVPRKVQALSDK--- 274
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++ +++ G RHS +T
Sbjct: 275 -----------------FISQVSGGWRHSMALT 290
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 30/204 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G ++A + +WG +D GQ HG+T + PT+ S ++ G
Sbjct: 22 GASHSVALLSGNVVCSWGRGED-GQL-----GHGDTDDRL-FPTKLSALDGQDIICVTCG 74
Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQA 165
H ++ +E+G +VY+WGW DFG G L +Q
Sbjct: 75 ADHTMARSESGRDVYSWGWG----------DFGRLGHGDHSDLLIPHPIKALQGLMIQQI 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D + + S R ++ G +L P + + + I VAAG H++
Sbjct: 125 ACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSV 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSR 249
++ G ++GWG+G G LGLG R
Sbjct: 185 AITKDGNLYGWGWGRYGNLGLGDR 208
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 110/290 (37%), Gaps = 56/290 (19%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL-TS 88
GT E+ I +P+ A L G GC LA + G + +WG +D GQ L ++
Sbjct: 532 GTFEERVIIATPVRA-LSGIAISMVAAANGCEHMLAVASDGAVFSWG-YNDRGQLGLGST 589
Query: 89 GKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
TP L + + AA + H V+ GE+ T+G +C G
Sbjct: 590 ISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC-------------G 636
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-------- 199
D T Q P S + + T +A + E + G +
Sbjct: 637 QLGLDHTQHQHT-PQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHA 695
Query: 200 --TLSPCLVTLNPG---VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
+P LV + G KI V+ G HT+ +S+ G++ WG GQLG+GS+
Sbjct: 696 RNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSK----- 750
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
EH S + PL + S +K +CG HS ++
Sbjct: 751 --------EHKNSAQFVPLPM------------SSKIKNASCGCYHSLIL 780
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
S +G+L+T+G +D GQ L +H TP+ + V KAA G H V+ T GE
Sbjct: 620 VVSSNGELLTFG-MNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGE 678
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------- 177
VY++G D+G G + K AL SD E++V
Sbjct: 679 VYSFG----------KNDYGQLGLGHARNI-KTPALVKTSLGESD----EKIVAVSCGYY 723
Query: 178 -------KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
K + + R + G + S V L KI + G H+LIL
Sbjct: 724 HTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSN 783
Query: 231 GQVWGWGYGGEGQLGLGSR 249
G+V +G +GQLG G+R
Sbjct: 784 GRVMVFGRNNKGQLGAGAR 802
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA S+ G+L +WG+ D +T+ P + ++++ + G HC+++
Sbjct: 96 SLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAAD 155
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G+ +TWG + + ++F S S Q+ + +P Q + +
Sbjct: 156 GQFFTWG-KNSHGQLGLGKEFPSQASPQRVRS--LEGIPLAQVAAGGAHSFALSLSGAVF 212
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
+ DE SPC V L K+ ++ G HT +L+ G V+ +G G G
Sbjct: 213 GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272
Query: 243 QLG 245
QLG
Sbjct: 273 QLG 275
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 55/249 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG ++ E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGN--HSVFLLEDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
S G+ + TE + P ++ ++ + + S A+
Sbjct: 110 ------------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGL 246
GQLGL
Sbjct: 216 MNNAGQLGL 224
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLN 135
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG--ETPEPFPLPTEASVVK-AAAGWA 114
G G +LA + +G++ +WG D L G H + P+ P VVK +AG+
Sbjct: 489 GSDGHSLALTTTGEVYSWGDGD---YGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYR 545
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +VTE GE+YTWG E ++ D+ S+ +F K ++ +
Sbjct: 546 HSAAVTEDGELYTWGDGEF---GRLGHDYTSSKNFPT----KVQSIESVGLVACGGSHTL 598
Query: 175 EVVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
V + KT S E+ GD L P ++ G+ I KVA G + +L ++ GQ
Sbjct: 599 AVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQ 658
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
++ WG G LG GS P L+ L+
Sbjct: 659 LYAWGCG--AILGCGSAEYTALRPRLVEDLQ 687
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLVGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 101/239 (42%), Gaps = 23/239 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G++LA G + WG G L G P P + VV AAG +H ++
Sbjct: 595 GNGYSLAVDAQGSVWAWGY---NGMGQLGDGTTTPRVTPTQAPALSGVVALAAGDSHSLA 651
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G + WG + G A + ++ + L A + A V+
Sbjct: 652 LRADGVAWAWGGND-------QGQLGDATTLERSTPAAVPGLAHVVALAAGN-AHSLVLH 703
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGWG 237
TSS+ + GD TL P V + PG K VAAGG H+L + G VW WG
Sbjct: 704 ADGTSSSWGNNAYGQLGDGTSTLHPVPVQV-PGPSAMKGVAAGGSHSLAVRSDGTVWAWG 762
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV-----NSSGKAG 287
G G+LG G+ ++ P P + L A ++G + L V+ G+V NS G+ G
Sbjct: 763 NNGSGELGDGTGLQR-PRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLG 820
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 124/323 (38%), Gaps = 66/323 (20%)
Query: 18 KETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLIT 74
+ V+ WG G + + I +P R+ DS V G+ +LA G +
Sbjct: 54 SDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDS---VVALAVGYQHSLALRSDGTVWA 110
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WG D L G ++ P + + VV AAG H +++ G V+ WG
Sbjct: 111 WG---DNFFGQLGDGSDAQSQVPIQVWSLNGVVAIAAGDHHSLALLSDGSVWAWG----- 162
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP-- 192
+ + G D+T S LP + +G + T S S+
Sbjct: 163 --------YNAHGQLGDDTT-VASPLPVQ----VQGLSGVVALSAGSTHSLAVLSDGKVK 209
Query: 193 ASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
A GD ++ +P LV+ GVK V AG H+L L G V WG G G
Sbjct: 210 AWGDNYYGQLGDGSSTERWTPVLVSSLTGVK--SVVAGTFHSLALCSDGTVRAWGENGSG 267
Query: 243 QLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV-----NSSGKAGRSYV-- 291
QLG+ S + P P ++P L + A+G L +R G+V N G+ G +
Sbjct: 268 QLGISSTTRR-PVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQ 326
Query: 292 -------------KEIACGGRHS 301
K IA GG HS
Sbjct: 327 QLTPVQVPGVGRMKSIAAGGAHS 349
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 95/251 (37%), Gaps = 46/251 (18%)
Query: 22 VYMWGY-----------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
V+ WGY P +P ++P LS + A L GDS +LA G
Sbjct: 608 VWAWGYNGMGQLGDGTTTPRVTPTQAPALSGVVA-LAAGDS----------HSLALRADG 656
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
WG +D+GQ L E P +P A VV AAG AH + + G +WG
Sbjct: 657 VAWAWG-GNDQGQ--LGDATTLERSTPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWG- 712
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSAR 186
+G G D T +P + PS + G + R +
Sbjct: 713 ---------NNAYGQLG----DGTSTLHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVW 759
Query: 187 EESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
N + GD P V + V+AG H+L + G VW WG +GQL
Sbjct: 760 AWGNNGSGELGDGTGLQRPRPVQVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQL 819
Query: 245 GLGSRI-KMVP 254
G G+ I + VP
Sbjct: 820 GDGTGITRYVP 830
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 104/277 (37%), Gaps = 56/277 (20%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+LA G + WG D L G + P +P A V ++ H ++V+
Sbjct: 448 HSLAARADGTVWAWG---DNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMHQHSLAVSR 504
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR----AGEE-- 175
G V+ WG F +G +T S L Q P AG
Sbjct: 505 DGTVWAWG-------------FNGSGRLGDGTT--LSRLTPVQVPGLSSMVAVAAGSTHS 549
Query: 176 -VVKRRKTSSAREESENPASGD--EFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMG 231
++ T A ++ N A GD LSP V PG+ + +AAG ++L + G
Sbjct: 550 LALRADGTVWAWGDNSNGALGDGTTLRRLSPVQV---PGLSGVVALAAGNGYSLAVDAQG 606
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQGSV------NS 282
VW WGY G GQLG G+ V TP P L A+G L +R V N
Sbjct: 607 SVWAWGYNGMGQLGDGTTTPRV-TPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGND 665
Query: 283 SGKAGR---------------SYVKEIACGGRHSAVV 304
G+ G ++V +A G HS V+
Sbjct: 666 QGQLGDATTLERSTPAAVPGLAHVVALAAGNAHSLVL 702
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 109/282 (38%), Gaps = 42/282 (14%)
Query: 11 NEKMEECKETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
N + + V+ WG G + + I +P R+ G + V G +LA
Sbjct: 797 NHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMAVSAGSA-HSLALRSD 855
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPE-----PFPLPTEASVVKAAAGWAHCVSVTEAGE 124
G + WG Y G+ G+ P +P VV AAG H ++V G
Sbjct: 856 GTVWAWG--------YNFYGQLGDATSTQRLVPIQVPGLTGVVSIAAGTHHSLAVRSDGT 907
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRAGEE---VVK 178
V+ WG+ +G G D T Q + P + A AG V
Sbjct: 908 VWAWGYNF----------YGQLG----DGTKIQRSPPVQVPGLAGMVSVAAGTYHSLAVH 953
Query: 179 RRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
T A + + GD T L P ++ + GV AA H+L++ G VWGW
Sbjct: 954 SNGTVWAWGYNNHGQLGDGTTTQRLLPVPISSSSGVI---AAAANWHSLVVRTDGTVWGW 1010
Query: 237 GYGGEGQLGLGSRI-KMVPTPHLIPC-LEHAASGKDRPLLVR 276
G QLG GS + +PTP +P + +SG + L +R
Sbjct: 1011 GSNNASQLGDGSTSDRKMPTPSSVPNGVRSISSGANHSLALR 1052
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 99/246 (40%), Gaps = 29/246 (11%)
Query: 18 KETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ V+ WGY G + + +P ++ G + G +LA G + WG
Sbjct: 854 SDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLTGVVSIAAG-THHSLAVRSDGTVWAWG 912
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+ GQ L G + P +P A +V AAG H ++V G V+ WG+
Sbjct: 913 Y-NFYGQ--LGDGTKIQRSPPVQVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGY------ 963
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG----EEVVKRRKTSSAREESENP 192
+ G G D T Q LP + S A +V R + S N
Sbjct: 964 ----NNHGQLG----DGTTTQRLLPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNA 1015
Query: 193 ASGDEFFTLS---PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-S 248
+ + T P ++ GV+ +++G H+L L G VW WG+G GQLG G
Sbjct: 1016 SQLGDGSTSDRKMPTPSSVPNGVR--SISSGANHSLALRSDGTVWAWGFGNSGQLGDGVM 1073
Query: 249 RIKMVP 254
+++VP
Sbjct: 1074 SMRLVP 1079
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 108/290 (37%), Gaps = 42/290 (14%)
Query: 3 MNGSKREENEKMEECKETVVYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG 61
M G + + + V+ WG G + + + P P ++ G S V G
Sbjct: 739 MKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQGLGSAVAVSAG-TN 797
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+LA G + WG + +GQ L G P + V+ +AG AH +++
Sbjct: 798 HSLAVQSDGTVWAWG-GNSQGQ--LGDGTGITRYVPVRVSGLNGVMAVSAGSAHSLALRS 854
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G V+ WG+ +G G D+T Q +P + P
Sbjct: 855 DGTVWAWGYNF----------YGQLG----DATSTQRLVPIQ--VPGLTGVVSIAAGTHH 898
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITK--------------VAAGGRHTLIL 227
+ + R + A G F+ L G KI + VAAG H+L +
Sbjct: 899 SLAVRSDGTVWAWGYNFYG------QLGDGTKIQRSPPVQVPGLAGMVSVAAGTYHSLAV 952
Query: 228 SDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVR 276
G VW WGY GQLG G+ +++P P AA+ L+VR
Sbjct: 953 HSNGTVWAWGYNNHGQLGDGTTTQRLLPVPISSSSGVIAAAANWHSLVVR 1002
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 32/260 (12%)
Query: 10 ENEKMEECKETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
++ + + V+ WGY G + + + SP+P ++ G S G +LA
Sbjct: 146 DHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG-LSGVVALSAGSTHSLAVLS 204
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
GK+ WG D L G E P + + V AG H +++ G V W
Sbjct: 205 DGKVKAWG---DNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAW 261
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G + G + + ++ L QA + A ++ T A
Sbjct: 262 G-------ENGSGQLGISSTTRRPVPVVVPGLTNVQALAAGS-AHSLALRSDGTVRAWGN 313
Query: 189 SENPASGDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+++ G+ + L+P V PGV ++ +AAGG H+L + G W WG +GQLG
Sbjct: 314 NDHGQVGNGTISQQLTPVQV---PGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLG 370
Query: 246 -------------LGSRIKM 252
LG RI+M
Sbjct: 371 DGQSSQQLRPARVLGQRIRM 390
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 62/160 (38%), Gaps = 34/160 (21%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P PL E + AAG AH + + G V+ WG +G G D TG
Sbjct: 34 PPPLGHE----QVAAGAAHSLMLRSDGTVWAWG----------DNTYGQLG----DGTGI 75
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF----------TLSPCLV 206
LP A V + + + R + A GD FF + P V
Sbjct: 76 TQRLPVRVQSLDSVVA--LAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQV 133
Query: 207 -TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+LN + +AAG H+L L G VW WGY GQLG
Sbjct: 134 WSLN---GVVAIAAGDHHSLALLSDGSVWAWGYNAHGQLG 170
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 99/285 (34%), Gaps = 72/285 (25%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+LA S G + WG G L G P +P +S+V AAG H +++
Sbjct: 498 HSLAVSRDGTVWAWGF---NGSGRLGDGTTLSRLTPVQVPGLSSMVAVAAGSTHSLALRA 554
Query: 122 AGEVYTWG------------WRECVP------SAKVTRDFGSAGSFQKDSTGKQSALPTE 163
G V+ WG R P S V G+ S D+ G A
Sbjct: 555 DGTVWAWGDNSNGALGDGTTLRRLSPVQVPGLSGVVALAAGNGYSLAVDAQGSVWAWGYN 614
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ G+ R T T +P L + +AAG H
Sbjct: 615 GM----GQLGDGTTTPRVTP----------------TQAPALS------GVVALAAGDSH 648
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQGSV 280
+L L G W WG +GQLG + ++ TP +P L H A+G L++
Sbjct: 649 SLALRADGVAWAWGGNDQGQLGDATTLER-STPAAVPGLAHVVALAAGNAHSLVLHADGT 707
Query: 281 NSS------GKAGR---------------SYVKEIACGGRHSAVV 304
+SS G+ G S +K +A GG HS V
Sbjct: 708 SSSWGNNAYGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSHSLAV 752
>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
Length = 392
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 14/221 (6%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+ + SP+ + ++ + + G +I +G+ D +S G+T
Sbjct: 16 ASLFSPVASHAQDSFNYDHLLSADNNRTFMVKKDGSVI-YGTGSDANGVLGSSSVKGKTT 74
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P P+ + V+ G +H V++ + G V+TWGW +G G+ + ST
Sbjct: 75 SPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSA----------YGELGNEKAKSTE 124
Query: 156 KQSALPTEQAPPSDKRAGEEV---VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
K + RAGE +K T A ++ + GD V ++
Sbjct: 125 KTPHHVKWLSDVKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLT 184
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
I + AG +L LS+ G VW WG GQLG G+R K +
Sbjct: 185 DIVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKAL 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 35/208 (16%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F+LA SE G + WG+ + GQ L +G + +P + V+ + G +VT
Sbjct: 195 FSLALSEDGTVWAWGN-NSVGQ--LGNGTREKALQPVQVSELTDVIAISTGEKQGYAVTS 251
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G+VY WG+ + G G D T K P D A + ++
Sbjct: 252 NGDVYGWGYNQ-----------GKLG----DGTNKSRNSPVLIDGIYDVIAVDS--GKQH 294
Query: 182 TSSAREESENPASGDEF-----------FTLSPCLVTLN---PGVKITKVAAGGRHTLIL 227
T + +E+ A G ++++P V L P +I + AGG H+ +
Sbjct: 295 TLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAI 354
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
G VW WG+ G+LGLG S+ +M P
Sbjct: 355 KKDGTVWSWGFNSNGELGLGHSKKQMYP 382
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 77/202 (38%), Gaps = 14/202 (6%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F LA E G + +G + GQ L G +P + +V AG ++
Sbjct: 142 GENFTLALKEDGTVWAFGK-NRSGQ--LGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLA 198
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
++E G V+ WG TR+ + + S L A + ++ G V
Sbjct: 199 LSEDGTVWAWGNNSVGQLGNGTRE-------KALQPVQVSELTDVIAISTGEKQGYAVTS 251
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWG 237
G SP L+ G+ + V +G +HTL L + G VW WG
Sbjct: 252 NGDVYGWGYNQGKLGDGTNKSRNSPVLI---DGIYDVIAVDSGKQHTLALKEDGTVWAWG 308
Query: 238 YGGEGQLGLGSRIKMVPTPHLI 259
GQLG G+ + TP+ +
Sbjct: 309 TNTHGQLGYGTPVNYSMTPNQV 330
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 103/287 (35%), Gaps = 52/287 (18%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA + GKL TWG + K TP +V+AA G HC+
Sbjct: 45 GGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCL 104
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-QKDSTG----KQSALPTEQAPPSDKR- 171
+V + G Y WG E +G G KD TG + +P AP R
Sbjct: 105 AVDDQGRAYAWGGNE----------YGQCGEEPSKDETGRPVRRDIVIPKRCAPQLTVRQ 154
Query: 172 ---AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
G V + + GD P V V++ +A G H L L
Sbjct: 155 VAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISIPVRVQGLENVRL--IAVGAFHNLALK 212
Query: 229 DMGQVWGWGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSS 283
+ G +W WG GQLG G R +P L + ++ AA G L +G V
Sbjct: 213 EDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGW 272
Query: 284 GK-------------------------AGRSYVKEIACGGRHSAVVT 305
G+ AG + +++CGG HS +T
Sbjct: 273 GRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDII-QVSCGGTHSVALT 318
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM--- 252
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 286 DKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSY 309
+ P IP LE + D G+ K +ACGGRH+ + + +
Sbjct: 346 LELPIDIPPLEGRFNHTDEE------------DDGKWIAKHVACGGRHTLAIVEWKF 390
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV VKI + A GG H L + D G+ + WG GQ G
Sbjct: 81 TPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG---------------- 124
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSY 309
E + RP VR+ V A + V+++A GG HS V+T Y
Sbjct: 125 EEPSKDETGRP--VRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGY 170
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 65/321 (20%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEG 82
+G L ++ +L P + +DV GCG + + G + T G +D G
Sbjct: 9 YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLG 64
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------R 131
Q L K + PE ++V A G AH +++ + G+VY WG
Sbjct: 65 Q--LGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 132 ECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+ +V R+ S Q + + G +L +A + + ++++
Sbjct: 123 ECI---RVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 180 ------------SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 250 IKMVPTPHLIPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR--------------- 288
P+L+ L + G+D L ++G V + G G
Sbjct: 228 NDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 289 -------SYVKEIACGGRHSA 302
S V ++ACG +H++
Sbjct: 287 KVFELMGSIVTQVACGRQHTS 307
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLVGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 97/291 (33%), Gaps = 96/291 (32%)
Query: 4 NGSKREENEKMEECKETVVYMWGYLP------GTSPEKSPILSPIP-------ARLCGGD 50
+ S+R ++ VY WG +P G S IP A++ GD
Sbjct: 997 SSSRRTKDGAKHTVSHLNVYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGD 1056
Query: 51 --------SWKDVCGGGCGFALATSESGKL------------ITWGSADDEGQSYLTSGK 90
S K G F SG+L G+ D + S+ T
Sbjct: 1057 YHSAVLVSSSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCT--- 1113
Query: 91 HGETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
TP+P L ++V A G H + T G VY+WG G+ G
Sbjct: 1114 --HTPQPVGLSIGLRNAIVSIACGANHTLVTTVDGCVYSWG-------------MGAYGV 1158
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
S + P + PSD
Sbjct: 1159 LGTGSVANRYN-PVKVVFPSDN-------------------------------------- 1179
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ I+K AG RH++ L G VW WGYGG G+LGLGS + TP+LI
Sbjct: 1180 ---IFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGS-TRNYYTPNLI 1226
Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 34/146 (23%)
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVK--ITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
E+ + P+ + T +P V L+ G++ I +A G HTL+ + G V+ WG G G L
Sbjct: 1104 EDKDEPS----WCTHTPQPVGLSIGLRNAIVSIACGANHTLVTTVDGCVYSWGMGAYGVL 1159
Query: 245 GLGS------RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG---------RS 289
G GS +K+V I + A + L ++G+V S G G R+
Sbjct: 1160 GTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRN 1219
Query: 290 Y-------------VKEIACGGRHSA 302
Y V +I+CG HSA
Sbjct: 1220 YYTPNLIRIFDTYEVFQISCGDSHSA 1245
Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVP--TPHLIPCL 262
KI+K+A G H+L ++ G ++ WG GQLG G R +++P P++ C+
Sbjct: 1476 KISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHVPYIENCI 1528
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 92/265 (34%), Gaps = 69/265 (26%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGE------TPEPFPLPTEASVVKAAAGWA 114
G A +E G + TWG T G+ G PE P VK A G
Sbjct: 113 GHMAAVTEDGSVWTWGRG--------TFGRLGHEVHETGIPEKVPGLDGMRFVKVACGHV 164
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++T+ G V+ WG G G + + Q D AG
Sbjct: 165 HTLALTDDGRVFAWG----------NNKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGM 214
Query: 175 EVVKRRKTSSAREESENPA---SGDEF----------FTLSPCLVTLNPGVKITKVAAGG 221
E SSA +E+ D + + P + V I ++A G
Sbjct: 215 E-------SSAALSAEHEVYTWGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQ 267
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
H L LS G+V+ WG G +GQ ++ PH+I L+
Sbjct: 268 YHMLALSAAGEVYAWGQGLQGQTANEKKVD-TNIPHVIDALK------------------ 308
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTD 306
S VK IA GG HSAVV D
Sbjct: 309 ------ESRVKMIAAGGSHSAVVDD 327
>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 563
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 23/221 (10%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L + + G G +LA + + ++ WG + GQ + + TP
Sbjct: 83 TPVTVDLPADTTITAIAAGVNGHSLAVTSASTMLAWG-FNTWGQLGDGTTTNRNTPVAVD 141
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LPT ++ AAG +H ++VT AG + WG SAG +T ++
Sbjct: 142 LPTGTTITAIAAGKSHSLAVTSAGTMLAWG-------------LNSAGQLGDGTTTNRNT 188
Query: 160 -----LPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNP 210
LPT + + + EN G +P V L
Sbjct: 189 PVAVDLPTGTTITAIAAGNGHSLALTSAGTMLAWGENTWGQLGDGTTTNRNTPVTVDLPT 248
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
G IT +A GG H+L ++ G + WG+ GQLG G+
Sbjct: 249 GTTITALAGGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTN 289
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPT 102
L G + + + CG ++A S+ G++ +WG+ D GQ LT+ + T P
Sbjct: 77 LIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD-GQLGLTTIEDAVTVPRLIKKLN 135
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ ++++ + G HC+++ G+ +TWG + + ++ S S Q+ +P
Sbjct: 136 QQTILQISCGNWHCLALAADGQFFTWG-QNSYGQLGLGKECPSQASPQR--VKSLDGIPL 192
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S DE SPC V L K+ ++ G
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEE 252
Query: 223 HTLILSDMGQVWGWGYGGEGQLG 245
HT +L+ G V+ +G G GQLG
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLG 275
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P L+ G I VA G H++ LSD GQV+ WG G +GQLGL + V P LI
Sbjct: 75 PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLI 131
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 72/284 (25%), Positives = 103/284 (36%), Gaps = 76/284 (26%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++ WG + GQ + S PEP + + +V + A G H V + E GEVYT G
Sbjct: 1 MLCWGYSS-FGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ G +S G + L AG+ +V A ES
Sbjct: 60 -------------LNTKGQLGHESEGSKPEL-------IGALAGQHIVH-----VACGES 94
Query: 190 ENPASGDEFFTLS--------------------PCLVTLNPGVKITKVAAGGRHTLILSD 229
+ A D+ S P L+ I +++ G H L L+
Sbjct: 95 HSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAA 154
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGKDRPLLVRQGSV--- 280
GQ + WG GQLGLG +P IP + AA G L G+V
Sbjct: 155 DGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 281 --NSSGKAGRSYVKE-----------------IACGGRHSAVVT 305
NSSG+ G S ++ I+CG H+AV+T
Sbjct: 215 GKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLT 258
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|156378180|ref|XP_001631022.1| predicted protein [Nematostella vectensis]
gi|156218054|gb|EDO38959.1| predicted protein [Nematostella vectensis]
Length = 133
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 26/98 (26%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLEHAASG 268
G+ I +AAGG H+ ++SD G V+GWG+ GQ+G+G I +M PTP P
Sbjct: 34 GINIKCIAAGGWHSAVISDAGDVYGWGWNESGQVGIGDGIQCQMDPTPICFP-------A 86
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
D P +V +ACG RH+A V+D
Sbjct: 87 SDEPNVV-----------------SVACGARHTAAVSD 107
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ VA G RHT +SD QVW WG+G GQLG G R
Sbjct: 91 NVVSVACGARHTAAVSDDAQVWTWGWGWYGQLGHGDR 127
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T P + +L I + W + S++G + WG ++ GQ + G
Sbjct: 24 TEPRRLEVLVGINIKCIAAGGWH---------SAVISDAGDVYGWGW-NESGQVGIGDGI 73
Query: 91 HGE---TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ TP FP E +VV A G H +V++ +V+TWGW
Sbjct: 74 QCQMDPTPICFPASDEPNVVSVACGARHTAAVSDDAQVWTWGW 116
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 55/249 (22%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQA---PPSDKRAGEEVVKRRKTSSAREESENPASG 195
AGS G+ + TE + P ++ ++ + + S A+
Sbjct: 110 -------AGS-----DGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAAD 155
Query: 196 DEFFT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+FFT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 156 GQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215
Query: 238 YGGEGQLGL 246
GQLGL
Sbjct: 216 MNNAGQLGL 224
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI L
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ 136
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA G + WG +D GQ L +G +P P P+P + VV AAG H +
Sbjct: 227 GGYMHSLALCADGTVWAWGF-NDYGQ--LGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSL 283
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG FG G A+ T++ P EVV
Sbjct: 284 ALCADGTVWAWG----------NNGFGQLG----------EAVSTQRTKPGRVEGLREVV 323
Query: 178 ----------KRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
R S N + G+ F+ S + +T VAAGG H++
Sbjct: 324 AVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSVAAGGMHSV 383
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+ G VW WG EGQLG R TP +P L+
Sbjct: 384 AVQADGTVWAWGRNEEGQLGH-ERAPERATPVRVPGLQ 420
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 17/191 (8%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++LA G + GS + GQ L +G P P+P + V AAG +H +
Sbjct: 127 GGYQYSLALHADGTVWACGS-NSAGQ--LGNGTTAARSAPRPVPGLSRAVAVAAGGSHAL 183
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ--APPSDKRAGEE 175
++ G V+ WG +G G+ +P Q +
Sbjct: 184 ALCADGTVWAWG----------NNGYGQLGNGSTAHRATPVQVPGLQGVVAVAGGYMHSL 233
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVW 234
+ T A ++ G+ SP V + PG+ ++ VAAGG H+L L G VW
Sbjct: 234 ALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPV-PGLSQVVSVAAGGFHSLALCADGTVW 292
Query: 235 GWGYGGEGQLG 245
WG G GQLG
Sbjct: 293 AWGNNGFGQLG 303
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHA 265
PG++ + VA G H+L L G VW WG+ GQLG G+ + VP P L + A
Sbjct: 217 PGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVA 276
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
A G L G+V + G G + E
Sbjct: 277 AGGFHSLALCADGTVWAWGNNGFGQLGE 304
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
PG+ + VAAGG H L L G VW WG G GQLG GS TP +P L+
Sbjct: 167 PGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRA-TPVQVPGLQ 220
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 131 QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 190
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ +P Q
Sbjct: 191 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQASPQR--VRSLEGIPLAQVAAGGA 247
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + + DE SPC V L K+ ++ G HT +L+
Sbjct: 248 HSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 307
Query: 231 GQVWGWGYGGEGQLG 245
G V+ +G G GQLG
Sbjct: 308 GGVFTFGAGSCGQLG 322
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 117/309 (37%), Gaps = 94/309 (30%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDV----CGGGCGFALATSESGKLITWGSADDEGQS 84
PG S I++ ++CG S + V CGG L E G++ T G + +GQ
Sbjct: 59 PGISTNLRGIVAE--PQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-LNTKGQ- 112
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
L + G PE + ++V A G +H +++++ G++++WG
Sbjct: 113 -LGHEREGNKPEQIGALADQNIVHVACGESHSLALSDRGQLFSWG--------------- 156
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
AGS G+ + TE D A ++++ +
Sbjct: 157 -AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------------- 185
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------ 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 186 ---------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEG 236
Query: 259 IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRS-----------------YVKEIAC 296
IP + AA G L G+V N++G+ G S V I+C
Sbjct: 237 IPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISC 296
Query: 297 GGRHSAVVT 305
G H+AV+T
Sbjct: 297 GEEHTAVLT 305
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 81/205 (39%), Gaps = 19/205 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA SGK+ +WG + GQ S H TP V + A G A +
Sbjct: 117 GSDHVLALDASGKIRSWGRGE-SGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAA 175
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-GEEVV 177
+ E G++YTWG +G G + S+ LP+ A G +
Sbjct: 176 LMEGGQLYTWGCNR----------YGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHI 225
Query: 178 KRRKTSSAREESENPASGD------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
TS N + G + L P V + G+ I ++ AG H+ +++ G
Sbjct: 226 VVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFG 285
Query: 232 QVWGWGYGGEGQLGLGS-RIKMVPT 255
++ WG G GQLG G K +PT
Sbjct: 286 DIYTWGRGDFGQLGHGDMESKDIPT 310
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 72/190 (37%), Gaps = 5/190 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+ A E G+L TWG + GQ P P V A G AH V
Sbjct: 169 GVAFSAALMEGGQLYTWG-CNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVV 227
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T + +VYTWG ++ F Q S S L +Q + +
Sbjct: 228 LTTSRDVYTWGNNSY---GQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSF 284
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ R + GD P L++ L+P + + + +G + ++ G V+ WG
Sbjct: 285 GDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWG 344
Query: 238 YGGEGQLGLG 247
GQLG G
Sbjct: 345 RNCFGQLGHG 354
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 98/266 (36%), Gaps = 52/266 (19%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
VY WG G K L P R+ G K + G + TS G + TWG
Sbjct: 234 VYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTS-FGDIYTWGR 292
Query: 78 AD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
D G + S P T+AS++ + A + +++T +G VY+WG R C
Sbjct: 293 GDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADF--IMAMTYSGAVYSWG-RNC-- 347
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---SDKRAGEE----------------- 175
FG G K + P++ P S A EE
Sbjct: 348 -------FGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVL 400
Query: 176 -VVKRRKTSSAREESENPASG----DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ +++ T A E+ G D F P V G+ + A H+++++ M
Sbjct: 401 AITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATM 460
Query: 231 --------GQVWGWGYGGEGQLGLGS 248
+V+ WG G GQLG GS
Sbjct: 461 PGSGPKGDMKVFSWGRGSFGQLGYGS 486
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 96/233 (41%), Gaps = 33/233 (14%)
Query: 40 SPIPARLCGGDSWK----DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+P+PAR+ W+ G G +LA G + +WG A+ GQ L G
Sbjct: 87 NPMPARV-----WRLFSITAIGAGELHSLALKSDGTVWSWG-ANTNGQ--LGDGTLISRS 138
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P P+P +VV AAG++H + + G V+ WG +AG D T
Sbjct: 139 VPAPVPGLTNVVAIAAGFSHSMVLKADGTVWAWG-------------LNAAGQL-GDGTP 184
Query: 156 KQSALPTEQAPPSDKR--AGEEVVKRRKTSSAREESENPASGDEFFT---LSPCLVTLNP 210
+ P + + + A V T+ R + + T + P
Sbjct: 185 TRRLTPVQVLGLTGVKDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGDLVGRSTAAALP 244
Query: 211 GVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
G+ + ++ GG H+LIL G VW WG GQLGLGS + PTP +P L
Sbjct: 245 GMTGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVS-TPTPTQVPGL 296
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 79/210 (37%), Gaps = 11/210 (5%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +L G + +WG +D GQ L G TP P +P +V G H V
Sbjct: 254 GGGSHSLILKMDGSVWSWGK-NDAGQ--LGLGSVVSTPTPTQVPGLTEMVAVTGGGQHSV 310
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG + G Q+ S + + L + + V
Sbjct: 311 ALRVDGTVWAWG-------SNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGLHSVAV 363
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
K A + GD + + T V+ V+AGG HTL L G WGWG
Sbjct: 364 KGNGEVWAWGSNSEGQVGDGTYLMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWG 423
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
+ QLG G+ P P + L A+
Sbjct: 424 LNAQSQLGDGTTTAR-PLPVQVLNLTRVAA 452
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 23/115 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHAASGKD 270
IT + AG H+L L G VW WG GQLG G+ I P P L + AA
Sbjct: 99 ITAIGAGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGLTNVVAIAAGFSH 158
Query: 271 RPLLVRQGSV-----NSSGKAGR---------------SYVKEIACGGRHSAVVT 305
+L G+V N++G+ G + VK+IA G HS +T
Sbjct: 159 SMVLKADGTVWAWGLNAAGQLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHSLALT 213
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 90/224 (40%), Gaps = 27/224 (12%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
S + +P P ++ G V GGG ++A G + WGS ++ L G +
Sbjct: 283 SVVSTPTPTQVPGLTEMVAVTGGGQ-HSVALRVDGTVWAWGS---NARAQLGDGTQTQRL 338
Query: 96 EPFPLPTEASVVK--AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
P + T + VK AA G H V+V GEV+ WG + G G D
Sbjct: 339 SPCQV-TGLTQVKGVAAGGGLHSVAVKGNGEVWAWG----------SNSEGQVG----DG 383
Query: 154 TGKQSALPT------EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
T +PT E+A S +K T+ + GD T P V
Sbjct: 384 TYLMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTTTARPLPVQ 443
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+ ++ V+AG H+L L + G VWGWG G +G G+ +
Sbjct: 444 VLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALN 487
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 21/202 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHC 116
G GF+LA G + WG G + G + P+ T+A V AAG H
Sbjct: 906 GDGFSLALKHDGTVWAWG-----GNTLGQLGDNTTLRSLVPVRTQALTGVTAVAAGRNHS 960
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G ++ WG + + G +K + + ++L A + V
Sbjct: 961 LALKGDGTLWAWG-------SNTYGELGDGTQARKLAPVQVTSLTGVSALDAGDHHSLAV 1013
Query: 177 VKRRKTSS-AREESENPASG-DEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQV 233
K R + G + L P V PG+ VA GG H+L L V
Sbjct: 1014 TSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQV---PGLTSAVAVAGGGEHSLALLSDRSV 1070
Query: 234 WGWGYGGEGQLGLG-SRIKMVP 254
W WG+G GQLG G S +++ P
Sbjct: 1071 WAWGHGDMGQLGTGMSNLRLSP 1092
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 89/238 (37%), Gaps = 28/238 (11%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHCVSVTE 121
+LA S G + WG D L G T PF +P VV AAG H +++
Sbjct: 510 SLALSVDGSVWAWG---DNSLGQLGDGTVTPTRNAPFRVPNLEGVVSLAAGGEHSLALKA 566
Query: 122 AGEVYTWGWRE-CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G V+ WG ++ C V R +Q T+ R V++
Sbjct: 567 DGTVWVWGRQDTCADPENVGRVL---------RVPEQVQGLTDAVAVRAGRCHSVVLRAD 617
Query: 181 KTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
T A + D FT ++P V GV + G TL L G W WG
Sbjct: 618 GTLWAWGRNAEGQLADGTFTDRMTPARVDGLTGV--ISFSVGSEQTLALKADGTAWAWGP 675
Query: 239 GGEGQLGLG-----SRIKMVPTPHLIPCLE----HAASGKDRPLLVRQGSVNSSGKAG 287
+GQLG G +R VPT + + HA KD L GS N+ G+ G
Sbjct: 676 NAQGQLGGGLSVPRTRPTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGS-NAEGQVG 732
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 68/170 (40%), Gaps = 23/170 (13%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P + V AAG H +++T G ++TWG V G+ G ST
Sbjct: 190 PVQVLGLTGVKDIAAGNVHSLALTADGRLWTWG-------GNVDGQLGT-GDLVGRST-- 239
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGV 212
+ALP + G + + S +N A G T +P V PG+
Sbjct: 240 AAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPTQV---PGL 296
Query: 213 -KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
++ V GG+H++ L G VW WG QLG G++ T L PC
Sbjct: 297 TEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQ-----TQRLSPC 341
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + L+P VT GV + + AG H+L ++ G+VWGWG GQ+G G +
Sbjct: 983 GTQARKLAPVQVTSLTGV--SALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQL 1040
Query: 255 TPHLIPCLEHAAS 267
P +P L A +
Sbjct: 1041 LPAQVPGLTSAVA 1053
>gi|350408000|ref|XP_003488267.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 534
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 65/274 (23%)
Query: 11 NEKMEECKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
NE + ++ +VY G GT + + LCG D K G LA
Sbjct: 34 NEALIITRDKIVYALGSNTSGCLGTGDDCNTFYPKKVEALCGKDI-KTFAYGKGPHVLAL 92
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LP-------TEASVVKAAAGWAHC 116
+E GK+ +WG HGE F +P ++ +V A G H
Sbjct: 93 TEEGKVYSWGH-----------NSHGELGNCFANNMIPMLVTRNLSDEFIVDIACGSHHS 141
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSALPTEQAP--PSDKRA 172
+++T G+VY WG ++++G+ +S E P + A
Sbjct: 142 LALTNEGKVYAWG---------------------ENTSGQVGKSVNINENTPMKVNSSLA 180
Query: 173 GEEVV--------KRRKTSSAR------EESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
G+ V+ T + + + G+ + PC VT+ GV I K+
Sbjct: 181 GKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCKVTMLAGVVIEKIV 240
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
G H L LS+ G ++ WG GQLGLG ++ +
Sbjct: 241 CGYAHVLALSNKGALYVWGGNNYGQLGLGMKMNI 274
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 26/114 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD+ T P V G I A G G H L L++ G+V+ WG+ G+LG M
Sbjct: 58 TGDDCNTFYPKKVEALCGKDIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCFANNM 117
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P L+ R S ++ +IACG HS +T+
Sbjct: 118 IPM-----------------LVTRNLS--------DEFIVDIACGSHHSLALTN 146
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 70/293 (23%), Positives = 116/293 (39%), Gaps = 62/293 (21%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQ 157
G AH +++ + G+VY WG EC+ +V R+ S Q + + G
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYY 147
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
+L +A + + + ++++ SP L+ G+ +V
Sbjct: 148 HSLALSKASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQV 195
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR- 271
AAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHT 254
Query: 272 PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 106/273 (38%), Gaps = 38/273 (13%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q PT + + + V
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---PTPRKVTNCLHIKKVVGIA 187
Query: 180 RKTSSAREESEN-------------PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+S+ +N G+ L+P V V + ++ G HTL
Sbjct: 188 CGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLA 247
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+D G ++ WG GQLG G++ ++ H++
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKNNLLNPVHIM 280
>gi|145593744|ref|YP_001158041.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303081|gb|ABP53663.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 577
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 91/259 (35%), Gaps = 50/259 (19%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+ L G D+ GGG +LA + +G L+ WG+ + GQ + TP L
Sbjct: 80 PVEVSLPAGTLLTDIAGGGK-HSLALTSTGSLLAWGN-NANGQLGDGTTTSSNTPVAVDL 137
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP---------SAKVTRDF-------- 143
P VV AAG H +++T G V WG S VT D
Sbjct: 138 PAGTEVVAIAAGNDHSLALTSTGAVLAWGDNSSGQLGDGTNDDRSTPVTVDLPTTSTTTA 197
Query: 144 ---GSAGSFQKDSTGKQSA--------LPTEQAPPSDK--------RAGEEVVKRRKTSS 184
GS S STG A L E ++K + S
Sbjct: 198 IAAGSVHSLSLTSTGSAFAWGNNDEGQLGDESTTSTNKPVNVALTTGTTLTAIAGGSAHS 257
Query: 185 AREESENPA------------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
S+N A G L+P V L G +T +AAG H++ L G
Sbjct: 258 LGITSDNTAVAWGSNSQGQLGDGTNTNALAPVNVALTTGTTVTAIAAGLLHSVALLTNGT 317
Query: 233 VWGWGYGGEGQLGLGSRIK 251
WG GQLG G+ +
Sbjct: 318 AATWGNNATGQLGNGNNVT 336
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPC 261
P V+L G +T +A GG+H+L L+ G + WG GQLG G+ P +P
Sbjct: 80 PVEVSLPAGTLLTDIAGGGKHSLALTSTGSLLAWGNNANGQLGDGTTTSSNTPVAVDLPA 139
Query: 262 ---LEHAASGKDRPL-LVRQGSV-----NSSGKAG 287
+ A+G D L L G+V NSSG+ G
Sbjct: 140 GTEVVAIAAGNDHSLALTSTGAVLAWGDNSSGQLG 174
>gi|342182230|emb|CCC91709.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 612
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 76/280 (27%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS------YL 86
P++ P+ PA G FA+A + ++ WG+ ++ GQS +
Sbjct: 234 PQRIPLFERCPAVHVAA---------GFAFAMAVTADHRVYFWGN-NNHGQSGLGREYFR 283
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
S + E P PL +V+ + G + + G +Y+WG +C+
Sbjct: 284 PSSRKVEGPTLVPLLDGKEIVQLSCGSFFTLGLGRDGTLYSWGLLDCL------------ 331
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
G ++ + + A PS +V R +S R L P +V
Sbjct: 332 ------GLGTEAEVRSSIADPS-------IVSRSLSSEER-----------VVVLEPQVV 367
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
+ K+ +V AG H+ +S G+++ WG G +G+LG G+ ++
Sbjct: 368 RVPTEHKLVRVHAGQWHSGAISSTGELFTWGIGFQGRLGHGNTEPVL------------- 414
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
RP VR G +V ++ACG H+ +TD
Sbjct: 415 ----RPKRVR-------GALADRHVVDVACGSFHTVALTD 443
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 95/284 (33%), Gaps = 92/284 (32%)
Query: 22 VYMWG-------------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
VY WG + P + + P L P+ L G + + CG F L
Sbjct: 264 VYFWGNNNHGQSGLGREYFRPSSRKVEGPTLVPL---LDGKEIVQLSCGSF--FTLGLGR 318
Query: 69 SGKLITWGSADDEGQ-------------SYLTSGKHGET------PEPFPLPTEASVVKA 109
G L +WG D G S ++ E P+ +PTE +V+
Sbjct: 319 DGTLYSWGLLDCLGLGTEAEVRSSIADPSIVSRSLSSEERVVVLEPQVVRVPTEHKLVRV 378
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
AG H +++ GE++TWG G G +T
Sbjct: 379 HAGQWHSGAISSTGELFTWG-------------IGFQGRLGHGNT--------------- 410
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
E V++ ++ A + + VA G HT+ L+D
Sbjct: 411 ----EPVLRPKRVRGALADRH-----------------------VVDVACGSFHTVALTD 443
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
G V+ WG GQ G+ + +P+ + LE A G R +
Sbjct: 444 CGSVYCWGDNTSGQCGMRWTTDTITSPNRVVNLEFIAGGVARSI 487
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 16/88 (18%)
Query: 197 EFFTLSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS------- 248
F +P LV + P G + VA G +T +L+ G ++ +G GQLGLGS
Sbjct: 164 RFDNNTPSLVRVVPFGSSVVDVALGADYTCVLTSKGDIYTFGGCDWGQLGLGSASYVEQH 223
Query: 249 ---RIKMVPTPHLIPCLE-----HAASG 268
+ +V P IP E H A+G
Sbjct: 224 PYKEVSVVRVPQRIPLFERCPAVHVAAG 251
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 97/251 (38%), Gaps = 56/251 (22%)
Query: 72 LITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
++TWGS+ + + T G+ TPE P + + G + ++TE G+VY WG
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWG 649
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV----KRRKTSSA 185
GS + + G S +Q P+ + EVV +++
Sbjct: 650 R-------------GSVKNPPLSTLGNGSL--EDQLLPTKVESLSEVVLVSIGYYHSAAL 694
Query: 186 REESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ E GD P +V +T+V G +HT+ L+ G+V+
Sbjct: 695 KSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFT 754
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WG GQLGLG K TP L+ LE + + +IA
Sbjct: 755 WGTSEYGQLGLGDTQKNC-TPMLVTSLE------------------------KYNIIQIA 789
Query: 296 CGGRHSAVVTD 306
CG H AV+T+
Sbjct: 790 CGSTHCAVLTN 800
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 66/292 (22%), Positives = 110/292 (37%), Gaps = 57/292 (19%)
Query: 54 DVCGGGCG--FALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++C CG ++ A +E+G + WG S + S L +G + P + + + VV
Sbjct: 625 EICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLV 684
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS- 168
+ G+ H ++ GE+ TWG C G G Q+ Q S
Sbjct: 685 SIGYYHSAALKSNGELLTWG---C----------GEDGQLGHGDVLNQTIPKVVQTMTSH 731
Query: 169 ---DKRAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ GE+ + K K + E GD +P LVT I ++A G
Sbjct: 732 WVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACG 791
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPLL 274
H +L++ +V +G G +GS ++ P ++P L+H + L
Sbjct: 792 STHCAVLTNAREVLVFGNGA----AMGS-ANIISVPMMVPALKHLNIERLSCGHYSTAAL 846
Query: 275 VRQGSVNSSGKAGR--------------------SYVKEIACGGRHSAVVTD 306
G V + G +++I+CGGRH A +TD
Sbjct: 847 TECGDVYTWGSGQELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTD 898
>gi|357508731|ref|XP_003624654.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|124359292|gb|ABD28429.2| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
gi|355499669|gb|AES80872.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
Length = 1099
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 96/226 (42%), Gaps = 47/226 (20%)
Query: 61 GFALATSESGKLITWGSADDEGQSY-LTSGKHGETPEPFPLPT-EASVVK-AAAGWAHCV 117
G +L +E L +WGS G +Y L +G P + + S++K +A H V
Sbjct: 162 GLSLVATE---LFSWGS----GANYQLGTGNAHIQKLPCKVDSLNGSIIKLISAAKFHSV 214
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF---QKDSTGKQSALPTEQAPPSDKRAGE 174
++T+ GEVYTWG FG G D Q+A+ T P +G
Sbjct: 215 ALTDRGEVYTWG-------------FGRGGRLGHPDFDIHSGQAAVIT----PRQVISGL 257
Query: 175 EVVKRRKTSSAREESENPASGDEFFT--------LSPCLVTLNPG--------VKITKVA 218
+ ++A+ + G E FT L V P +I VA
Sbjct: 258 GSRRVMAIAAAKHHTVVATQGGEVFTWGSNREGQLGYTSVDTQPTPRRVSTLRSRIVAVA 317
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE 263
A +HT ++SD+G+V+ WG EGQLG G S TPH++ L+
Sbjct: 318 AANKHTAVISDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLK 363
>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
variabilis]
Length = 379
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 98/246 (39%), Gaps = 42/246 (17%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA ++G+ WG ++ GQ + + P +V + AAG H +++TE G
Sbjct: 97 LALDDTGQCWAWG-GNEYGQCLPRDKR--DILAPVKCLEGIAVKQVAAGGMHSLALTETG 153
Query: 124 EVYTWG--WRE-CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
E++ WG W + + + R + G F S G L A
Sbjct: 154 EIWMWGEPWGDFSMTINRAPRRIDTTGDFVDVSCGAFHNLALNAAGEC------------ 201
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
+ + +G + P V GV I V+AGG H++ +S G+V+ WG G
Sbjct: 202 -FTWGINDFGMLGNGTTSYATCPEKVVGLEGVFIADVSAGGWHSMAISAEGEVYVWGRGE 260
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
G+LGLG R S K RP V+ + V E +CGG H
Sbjct: 261 YGRLGLGDR---------------TGSSKLRPQKVKTLEGHR--------VVEGSCGGTH 297
Query: 301 SAVVTD 306
+ VVTD
Sbjct: 298 TMVVTD 303
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 39/97 (40%), Gaps = 29/97 (29%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ-LGLGSRIKMVPTPHLIPCLEHAASGK 269
GV I + A GG H L L D GQ W WG GQ L R + P + CLE A
Sbjct: 83 GVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQCLPRDKRDILAP----VKCLEGIA--- 135
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
VK++A GG HS +T+
Sbjct: 136 ---------------------VKQVAAGGMHSLALTE 151
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 33/246 (13%)
Query: 19 ETVVYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E VY WG+ S + +P P + G K + CG LA + +G++
Sbjct: 84 ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA---CGDSHCLAVTMAGEVQ 140
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 141 SWGR-NQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR- 198
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE--- 190
+G+ G ++ LP + + ++ R T + +
Sbjct: 199 ---------YGNLGLGDRN----DRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYT 245
Query: 191 -------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
GD L P V I++++ G RHT+ L+ G+++GWG+ GQ
Sbjct: 246 YGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQ 305
Query: 244 LGLGSR 249
+G+G+
Sbjct: 306 VGVGNN 311
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 39/187 (20%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP+P + + A G +HC++VT AGEV +WG ++
Sbjct: 108 TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWG---------------------RNQ 146
Query: 154 TGKQSALPTEQAP-PSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
G+ TE + P +A E V + T++ E+ + N GD
Sbjct: 147 NGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 206
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
L P V+ G K+ VA G RHT+ +SD G ++ +G+ GQLG G + P
Sbjct: 207 RNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VP 265
Query: 257 HLIPCLE 263
H + L+
Sbjct: 266 HKVEALK 272
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 95/260 (36%), Gaps = 53/260 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
G ++A L +WG +D GQ L G + P F P SV+ A
Sbjct: 21 GASHSVALLTGNVLCSWGRGED-GQ--LGHGDAEDRLVPTVLSGFDAPAITSVICGAD-- 75
Query: 114 AHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
H + +E +VY+WGW DFG G F L +Q
Sbjct: 76 -HTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
D + S R ++ G +L P + V + +AAG HT
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+++ G ++GWG+G G LGLG R DR L + SV
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDR-------------------NDRLLPEKVSSVE----- 220
Query: 287 GRSYVKEIACGGRHSAVVTD 306
G V +ACG RH+ V+D
Sbjct: 221 GEKMVL-VACGWRHTITVSD 239
>gi|221487646|gb|EEE25878.1| UVb-resistance protein uvr8, putative [Toxoplasma gondii GT1]
Length = 578
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +++ V++ +V G +H L LSD G+V+ +G G GQLGLG ++V P +
Sbjct: 65 LQPVVISALANVRVVEVCVGEQHALFLSDAGEVFAYGQGIYGQLGLGYERQVVHLPQKV- 123
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G R V++IACG HS VT
Sbjct: 124 ----------------------EGALSRFPVRQIACGDYHSVAVT 146
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 94/242 (38%), Gaps = 64/242 (26%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ- 164
V + A G H V+VT G V+ WG +CV D +G P
Sbjct: 132 VRQIACGDYHSVAVTREGAVFAWGAADCV----------------GDGSGLCRFAPVRLS 175
Query: 165 --APPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFF-----TLSPCLVTLNPGVKITK 216
A P D A + R + ++A ES G+ FF T V P + +
Sbjct: 176 LGASPGD--ACRVIAARFQQTAAVSESGRLLVWGETFFADFHATPEVLCVFFRP---VVQ 230
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI---------PCLEHAAS 267
VA G L+L+D GQV+GWG G G+L + K +P P ++ P +E A
Sbjct: 231 VAIGKHFGLVLTDDGQVYGWGDGTYGELSPMA-PKTLPEPLILKDSSGQSLPPVVEIATG 289
Query: 268 GKDRPLLVRQGSV-----NSSGKAG-------------------RSYVKEIACGGRHSAV 303
+ LL + N +G+ G RS +IACG RHSA
Sbjct: 290 TRHAILLTHDMRLWALGDNLAGQCGVPGHQTRLSVPKMVKLGELRSRASKIACGYRHSAC 349
Query: 304 VT 305
+T
Sbjct: 350 IT 351
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 95/244 (38%), Gaps = 31/244 (12%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT +S ++ LCG K + G L ++E G + WG G S L +G
Sbjct: 55 GTGDNQSTLVPKKLEALCG-KRIKSLSYGSGPHVLLSTEDGVVYAWGH---NGYSQLGNG 110
Query: 90 KHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
+ P + T VV+ A G H +++ GE++ WG+ C G
Sbjct: 111 TTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNC----------GQV 160
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGD 196
GS ST Q K+ + + + + E G+
Sbjct: 161 GS---GSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PT 255
L+P V GV + ++ G HTL L+D G ++ WG GQLG GS+ ++ PT
Sbjct: 218 NGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPT 277
Query: 256 PHLI 259
++
Sbjct: 278 QIMV 281
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 21 VVYMWGYLPGTSPEKSPILSPI-PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGS 77
VVY WG+ + I P ++C K V CG ++A + G+L WG
Sbjct: 95 VVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGY 154
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
++ GQ + SG P P + VV A G ++V ++GEVY WG+
Sbjct: 155 -NNCGQ--VGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYN 208
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 40/220 (18%)
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD-STGKQ 157
PL E +K + GW H +T+ GE+YTWG + + G K S K+
Sbjct: 1117 PLKNEKKAIKVSCGWDHIAVITDDGELYTWG-------SNQSGQLGHGLEVNKTLSLPKR 1169
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKT-----SSAREESENPASGDEFFTLS-PCLVTLNPG 211
++P G E + S ++ G + S P ++ G
Sbjct: 1170 VDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTG 1229
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPT----PHLIPCLEHAA 266
KI +AAG H ++L G+++ +GYG GQLG GS K +PT ++ L+H
Sbjct: 1230 QKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHD 1289
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
GK + +IACG HS + ++
Sbjct: 1290 GGK---------------------ITQIACGFGHSVICSE 1308
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 101/271 (37%), Gaps = 91/271 (33%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPF 98
SPI CGG+ +A + + +WGS D GQ + T + P+
Sbjct: 1177 SPIFMVECGGEH-----------TIAVDSNYFVYSWGS-DKFGQLGHGTKAVNQSRPKVI 1224
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS--AGSFQKDSTGK 156
T + AAG+AH + + ++GE++++G+ DFG GSF +
Sbjct: 1225 EELTGQKIQAIAAGFAHNIVLKKSGELFSFGYG----------DFGQLGTGSFHSKN--- 1271
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+PT R E G + + G KIT+
Sbjct: 1272 ---IPT-----------------------RIEINAIMGG----------LQHHDGGKITQ 1295
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
+A G H++I S+ G+V+ WG G +GQLG + + P LI L
Sbjct: 1296 IACGFGHSVICSENGEVYSWGLGKQGQLG-HKVFENISKPRLIETLRG------------ 1342
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
V +I+CG H+ TD+
Sbjct: 1343 --------------VTKISCGHFHTVATTDL 1359
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA G + WG +D GQ L +G +P P P+P + VV AAG H +
Sbjct: 230 GGYMHSLALCADGTVWAWGF-NDYGQ--LGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSL 286
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V+ WG FG G A+ T++ P EVV
Sbjct: 287 ALCADGTVWAWG----------NNGFGQLG----------EAVSTQRTKPGRVEGLREVV 326
Query: 178 ----------KRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
R S N + G+ F+ S + +T VAAGG H++
Sbjct: 327 AVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGAVTSVAAGGMHSV 386
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+ G VW WG EGQLG R TP +P L+
Sbjct: 387 AVQADGTVWAWGRNEEGQLGH-ERAPERATPVRVPGLQ 423
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 17/191 (8%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG ++LA G + GS + GQ L +G P P+P + V AAG +H +
Sbjct: 130 GGYQYSLALHADGTVWACGS-NSAGQ--LGNGTTAARSAPRPVPGLSRAVAVAAGGSHAL 186
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ--APPSDKRAGEE 175
++ G V+ WG +G G+ +P Q +
Sbjct: 187 ALCADGTVWAWG----------NNGYGQLGNGSTAHRATPVQVPGLQGVVAVAGGYMHSL 236
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVW 234
+ T A ++ G+ SP V + PG+ ++ VAAGG H+L L G VW
Sbjct: 237 ALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPV-PGLSQVVSVAAGGFHSLALCADGTVW 295
Query: 235 GWGYGGEGQLG 245
WG G GQLG
Sbjct: 296 AWGNNGFGQLG 306
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHA 265
PG++ + VA G H+L L G VW WG+ GQLG G+ + VP P L + A
Sbjct: 220 PGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVA 279
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
A G L G+V + G G + E
Sbjct: 280 AGGFHSLALCADGTVWAWGNNGFGQLGE 307
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
PG+ + VAAGG H L L G VW WG G GQLG GS TP +P L+
Sbjct: 170 PGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRA-TPVQVPGLQ 223
>gi|260795414|ref|XP_002592700.1| hypothetical protein BRAFLDRAFT_118398 [Branchiostoma floridae]
gi|229277923|gb|EEN48711.1| hypothetical protein BRAFLDRAFT_118398 [Branchiostoma floridae]
Length = 392
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 57 GGGCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G G +A + G++ WG+ D+ GQ LTS + P P +P A V+K ++G +H
Sbjct: 143 GAGDSHTIALTTDGRVWCWGTFRDNNGQFGLTSDGKVQ-PRPVEIPLPARVLKISSGVSH 201
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP----PSDKR 171
+TE G++YT+G E ++ F G + S AL + S +
Sbjct: 202 VACLTEDGDLYTFGCGEQGQLGRIAECFTVRGGRKGLSLLVDPALVRMKGKRGSGKSHMK 261
Query: 172 AGEEVVKRRKTSSAREESENPASG--DEFFTLS---------PCLVTLNPGVKITKVAAG 220
+ T + ++ E+ + + ++ + P V G + T++ AG
Sbjct: 262 FADVFCGSHNTFAISDDQEDVYAFGLNNYYQMGLEGDTARYVPEHVESLSGKRWTQIEAG 321
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGL 246
HT+ LS+ G+ + WG G QLGL
Sbjct: 322 QHHTVALSEDGEAYSWGMGTNLQLGL 347
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 60/170 (35%), Gaps = 58/170 (34%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E +P + + V+ AG H V++T GEV++WG C + RD
Sbjct: 74 ERKKPGLVAIQDKVIDVCAGGMHTVALTVKGEVWSWG---CNDEGALGRD---------- 120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S + TE P + G
Sbjct: 121 ----TSEIGTETVPGK---------------------------------------VELGA 137
Query: 213 KITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIP 260
KI ++ AG HT+ L+ G+VW WG GQ GL S K+ P P IP
Sbjct: 138 KIAQLGAGDSHTIALTTDGRVWCWGTFRDNNGQFGLTSDGKVQPRPVEIP 187
>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
Length = 1271
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 116/311 (37%), Gaps = 69/311 (22%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
N+ E + +++WG P +L P L G V GG TS +G
Sbjct: 458 NDHQSEEPSSHMWVWGRPPSLEGGTPLVLRPKQVSLLNGQPIVQVACGGEHLLYLTS-TG 516
Query: 71 KLITWGSADDEGQSYLTSGKHGETPE---PFPLPTEASVVKA---------AAGWAHCVS 118
+ ++G +D+ + +T + + + + E ++ KA + G H ++
Sbjct: 517 DVYSYGDNEDKKAAAVTIATNANSADNDYTRSISKELALEKALHRTTIAMISCGAQHSLA 576
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T+AGE+YTWG E G G + A+P
Sbjct: 577 ITDAGELYTWGSGED----------GRLGH----GDMRDRAVP----------------- 605
Query: 179 RRKTSSAREESENPAS---GDEFFTLSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVW 234
RK S ES AS GD + +P + P G +I+ V G T L G ++
Sbjct: 606 -RKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIF 664
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG GEGQ GLG K P + L A+G S ++
Sbjct: 665 TWGKTGEGQCGLGYVDKDQVVPRCVEKLREVAAG--------------------SAAVDV 704
Query: 295 ACGGRHSAVVT 305
ACG H+ V+T
Sbjct: 705 ACGYTHTVVLT 715
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 104/298 (34%), Gaps = 79/298 (26%)
Query: 63 ALATSESGKLITWGSADDEGQSY----LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
+LA ++ GKL TWG + + K TP + +V+AA G HC++
Sbjct: 50 SLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLA 109
Query: 119 VTEAGEVYTWGWRE---------------------------CVPSAKVTRDFGSAGSFQK 151
V + G Y WG E C P V R + G+
Sbjct: 110 VDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKL-VVRQVAAGGTHSV 168
Query: 152 DSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAR-----------------------E 187
T + Q PP D + V+ + + R
Sbjct: 169 VLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNN 228
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
E +GD P V + + +AAGG H+ L+D G+V+GWG G G+LG G
Sbjct: 229 EYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFG 288
Query: 248 SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
K + ++P +G+D + +++CGG HS +T
Sbjct: 289 DSDK---SSKMVPQKVQLLAGED--------------------IVQVSCGGTHSVALT 323
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H++ L+ G ++ +G G G+LG G ++
Sbjct: 291 DKSSKMVPQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRKV-TTGQ 349
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKA--GRSYVKEIACGGRHSAVVTD 306
P +P D P + SG A G K +ACGGRH+ + +
Sbjct: 350 PMEVPI--------DLPP-----PQDPSGTATEGHWIAKLVACGGRHTLAIVE 389
>gi|392595634|gb|EIW84957.1| RCC1 BLIP-II [Coniophora puteana RWD-64-598 SS2]
Length = 582
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 37/224 (16%)
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD------ 152
PL V +AG H +++T +G +++ S K G G + D
Sbjct: 231 PLSWGEKFVSISAGQDHVLALTSSGRTFSYA------STKKANSHGQLGYRKFDLPASVT 284
Query: 153 STGKQSALPTEQAP--PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
T + +P E P D + R SS+ + E A D S L +
Sbjct: 285 QTKSTTRIPVELLPKLAKDPYSRASPFIRELASSSADPLE--AIDDRHIRFSDTLFEIQS 342
Query: 211 --GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM----VPTPHLI----- 259
G+K+++VAAG R + +L+D G+ G+G GQ+GLGS + + VPT ++
Sbjct: 343 LQGIKVSQVAAGSRSSFVLTDSGRALGFGANEYGQMGLGSNVTLDSIAVPTEIVLSRNVP 402
Query: 260 -----PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
CLE AA G + V + + S+GK +V + CG
Sbjct: 403 PSTSTKCLEIAAGG-NLTCFVAERTGLSTGK----FVDVLVCGN 441
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 111/308 (36%), Gaps = 62/308 (20%)
Query: 17 CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
C + ++ WG+ G PE SP P G GG LA + G+
Sbjct: 57 CDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGW-HCLAVDDKGRA 115
Query: 73 ITWGSADDEGQSYLTSGKHGETPE-----------PFPLPTEAS----VVKAAAGWAHCV 117
WG G Y G+ GE PE P P + V + AAG H V
Sbjct: 116 YAWG-----GNEY---GQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGGTHSV 167
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+T+ G V+TWG + P + + S G + + + E+ V
Sbjct: 168 VLTQEGHVWTWG--QPWPPGDIKQI-----STPVRVQGLEKVMMIAVGAFHNLALSEDAV 220
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ E GD P V G+ + +AAGG H+ L+ G+V+ WG
Sbjct: 221 L---WAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWG 277
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
G G+LG G + H++P G+D + +++CG
Sbjct: 278 RGEHGRLGFGDD----KSSHMVPLKVQLLDGED--------------------IVQVSCG 313
Query: 298 GRHSAVVT 305
G HS +T
Sbjct: 314 GTHSVALT 321
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 74/201 (36%), Gaps = 53/201 (26%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 53 SLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDK 112
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G Y WG E +G G P K G ++R
Sbjct: 113 GRAYAWGGNE----------YGQCGE-----------------EPERKEDGTRALRRDIP 145
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
+ R C + L K+ +VAAGG H+++L+ G VW W G
Sbjct: 146 TPQR-----------------CALKL----KVQQVAAGGTHSVVLTQEGHVWTW-----G 179
Query: 243 QLGLGSRIKMVPTPHLIPCLE 263
Q IK + TP + LE
Sbjct: 180 QPWPPGDIKQISTPVRVQGLE 200
>gi|221507444|gb|EEE33048.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 668
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +++ V++ +V G +H L LSD G+V+ +G G GQLGLG ++V P +
Sbjct: 155 LQPVVISALANVRVVEVCVGEQHALFLSDAGEVFAYGQGIYGQLGLGYERQVVHLPQKV- 213
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G R V++IACG HS VT
Sbjct: 214 ----------------------EGALSRFPVRQIACGDYHSVAVT 236
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 94/242 (38%), Gaps = 64/242 (26%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ- 164
V + A G H V+VT G V+ WG +CV D +G P
Sbjct: 222 VRQIACGDYHSVAVTREGAVFAWGAADCV----------------GDGSGLCRFAPVRLS 265
Query: 165 --APPSDKRAGEEVVKRRKTSSAREESENPAS-GDEFF-----TLSPCLVTLNPGVKITK 216
A P D A + R + ++A ES G+ FF T V P + +
Sbjct: 266 LGASPGD--ACRVIAARFQQTAAVSESGRLLVWGETFFADFHATPEVLCVFFRP---VVQ 320
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI---------PCLEHAAS 267
VA G L+L+D GQV+GWG G G+L + K +P P ++ P +E A
Sbjct: 321 VAIGKHFGLVLTDDGQVYGWGDGTYGELSPMAP-KTLPEPLILKDSSGQSLPPVVEIATG 379
Query: 268 GKDRPLLVRQGSV-----NSSGKAG-------------------RSYVKEIACGGRHSAV 303
+ LL + N +G+ G RS +IACG RHSA
Sbjct: 380 TRHAILLTHDMRLWALGDNLAGQCGVPGHQTRLSVPKMVKLGELRSRASKIACGYRHSAC 439
Query: 304 VT 305
+T
Sbjct: 440 IT 441
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 65/321 (20%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEG 82
+G L ++ +L P + +DV GCG + + G + T G +D G
Sbjct: 9 YGQLGLGGIDEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLG 64
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------R 131
Q L K + PE ++V + G AH +++ + G+VY WG
Sbjct: 65 Q--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 132 ECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+ +V R+ S Q + + G +L +A + + ++++
Sbjct: 123 ECI---RVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQT 179
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 180 ------------SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 250 IKMVPTPHLIPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR--------------- 288
P+L+ L + G+D L ++G V + G G
Sbjct: 228 NDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 289 -------SYVKEIACGGRHSA 302
S V +IACG +H++
Sbjct: 287 KVFELMGSIVTQIACGRQHTS 307
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 125/324 (38%), Gaps = 65/324 (20%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEG 82
+G L ++ +L P + +DV GCG + + G + T G +D G
Sbjct: 9 YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLG 64
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------R 131
Q L K + PE ++V A G AH +++ + G+VY WG
Sbjct: 65 Q--LGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 132 ECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+ +V R+ S Q + + G +L +A + + ++++
Sbjct: 123 ECI---RVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQT 179
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 180 ------------SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 250 IKMVPTPHLIPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR--------------- 288
P+L+ L + G+D L ++G V + G G
Sbjct: 228 NDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 289 -------SYVKEIACGGRHSAVVT 305
S V ++ACG +H++
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFV 310
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 81/211 (38%), Gaps = 34/211 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G + WG+ G L G P P+ VV AAG H V+
Sbjct: 1180 GAWHSLALRLDGTVWAWGA---NGFGQLGDGTTTARAVPVPVQGLRDVVAIAAGGYHSVA 1236
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V G V+TWG+ FG G D T + ALP + K G + V
Sbjct: 1237 VRSDGTVWTWGYNT----------FGQLG----DGTSESRALPVQ----VHKLEGVQAVT 1278
Query: 179 RRKTSSAREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
S ++ SG D T V L +T+V AG HT+ L
Sbjct: 1279 GGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVRAGAAHTVALG 1338
Query: 229 DMGQVWGWGYGGEGQLG---LGSRIKMVPTP 256
G VW WG GQLG G R+++VP P
Sbjct: 1339 KDGTVWTWGDNAHGQLGDGVTGPRMRLVPKP 1369
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 100/255 (39%), Gaps = 43/255 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F LA G + +WG A+ GQ L G + P +PT + + AAG H V+
Sbjct: 225 GFDFTLAVHADGAVSSWG-ANSFGQ--LGLGTFTQRLSPERIPTLSGITSVAAGTYHAVA 281
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ + G V+TWG + G G D T A+P AP V
Sbjct: 282 LGKDGTVWTWG----------SNSSGQLG----DGTWNDRAVP---APLPGVGGARAVAS 324
Query: 179 RRKTSSAREE-----------SENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLI 226
S A E S GD +P LV P + +T V G +H L
Sbjct: 325 LDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLV---PELSAVTAVVGGAQHALA 381
Query: 227 LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHL-IPCLEHAASGKDRPL-LVRQGSV--- 280
L G +W WG G GQLG GS +VP + + + A+G L + GSV
Sbjct: 382 LRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGSFHSLAALEDGSVWAW 441
Query: 281 --NSSGKAGRSYVKE 293
NS G+ G V E
Sbjct: 442 GRNSYGQLGDGTVTE 456
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA E G + WG + GQ L G E P +P SV AA H ++
Sbjct: 425 GSFHSLAALEDGSVWAWGR-NSYGQ--LGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIA 481
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GE 174
V G V+TWG R+ +AG D T + A P + + A G
Sbjct: 482 VAMDGTVWTWG-----------RN--AAGQL-GDGTTRDRARPVAVSGLTSVLAIAAGGS 527
Query: 175 EVVKRRKTS-------SAREESENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLI 226
V+ R +A + + SGD+ L+P V PG+ I VAAG ++
Sbjct: 528 HVLALRSDGDVWAWGYNALGQLGDGTSGDK---LTPVRV---PGLAPIQSVAAGTYFSMA 581
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMV 253
L++ G VW WG G EGQLG G ++ +
Sbjct: 582 LANDGTVWTWGEGFEGQLGDGGGVQRL 608
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 98/266 (36%), Gaps = 54/266 (20%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G ++ WG A++ GQ L G + P +P ++V G H +++ +
Sbjct: 329 SLALLEGGDVLAWG-ANNSGQ--LGDGDTADRSTPSLVPELSAVTAVVGGAQHALALRKD 385
Query: 123 GEVYTWGW------------RECVP---------SAKVTRDFGSAGSFQKDST---GKQS 158
G ++ WG R VP ++ T F S + + S G+ S
Sbjct: 386 GTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGSFHSLAALEDGSVWAWGRNS 445
Query: 159 -------------------ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDE 197
LP+ +A + AG + + N A GD
Sbjct: 446 YGQLGDGTVTERHVPVRVPGLPSVRAVAA---AGHHSIAVAMDGTVWTWGRNAAGQLGDG 502
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVP 254
V ++ + +AAGG H L L G VW WGY GQLG G+ ++ V
Sbjct: 503 TTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVR 562
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSV 280
P L P AA L G+V
Sbjct: 563 VPGLAPIQSVAAGTYFSMALANDGTV 588
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 108/297 (36%), Gaps = 55/297 (18%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
SPE+ P LS I + G A+A + G + TWGS + GQ L G
Sbjct: 259 SPERIPTLSGITS-----------VAAGTYHAVALGKDGTVWTWGS-NSSGQ--LGDGTW 304
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ P PLP A+ A +++ E G+V WG + G G
Sbjct: 305 NDRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWG----------ANNSGQLGDGDT 354
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA-----SGDEFFTLSPCLV 206
S +P A + + + RK + A G E + ++
Sbjct: 355 ADRSTPSLVPELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVM 414
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLE 263
L +T +A G H+L + G VW WG GQLG G+ R V P L
Sbjct: 415 GLT---NVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRA 471
Query: 264 HAASGKDRPLLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRH 300
AA+G + G+V N++G+ +G + V IA GG H
Sbjct: 472 VAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAIAAGGSH 528
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 122/318 (38%), Gaps = 58/318 (18%)
Query: 22 VYMWGYLP------GTS-----PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
V+ WGY GTS P + P L+PI + G F++A + G
Sbjct: 538 VWAWGYNALGQLGDGTSGDKLTPVRVPGLAPIQS-----------VAAGTYFSMALANDG 586
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+ TWG EGQ L G + P + + + + G AH ++V G V+ WG
Sbjct: 587 TVWTWGEGF-EGQ--LGDGGGVQRLSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWG- 642
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
G GS+ Q T S R+ + T A +
Sbjct: 643 ------DNNEGQLGD-GSWMDRFAPVQVRNLTGITAVSGGRSHSLALHADGTVRAWGSNG 695
Query: 191 NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
GD T S L ++ PG+ I + G H L L + GWGY GQLGLG+
Sbjct: 696 YGQLGDGTLT-SRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQLGLGAA 754
Query: 250 IKMVPTPHL--IPCLEHAASGKDRPLLVR-QGSV-----NSSGKAGR------------- 288
+ I +E A+G+ LLVR GSV N+SG+ G
Sbjct: 755 GWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVTVR 814
Query: 289 --SYVKEIACGGRHSAVV 304
S + +A GG+HS V+
Sbjct: 815 GVSCARSVASGGQHSLVL 832
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 78/210 (37%), Gaps = 24/210 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA G + WG + GQ L G G+ P +P A + AAG ++
Sbjct: 525 GGSHVLALRSDGDVWAWGY-NALGQ--LGDGTSGDKLTPVRVPGLAPIQSVAAGTYFSMA 581
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR------A 172
+ G V+TWG G G Q+ S P SD R A
Sbjct: 582 LANDGTVWTWG-------EGFEGQLGDGGGVQRLS-------PVAVKGLSDIRNISVGSA 627
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
V+ T A ++ GD + V + IT V+ G H+L L G
Sbjct: 628 HALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQVRNLTGITAVSGGRSHSLALHADGT 687
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V WG G GQLG G+ V P +IP L
Sbjct: 688 VRAWGSNGYGQLGDGTLTSRV-LPSVIPGL 716
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 98/246 (39%), Gaps = 23/246 (9%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +LA G + WGS G L G P +P + + G H +
Sbjct: 674 GGRSHSLALHADGTVRAWGS---NGYGQLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVL 730
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ + WG+ + SA Q G+ L +A RA VV
Sbjct: 731 ALHADKTLRGWGYNRFGQLGLGAAGW-SARPVQVRGIGRVERLAAGRAHALLVRADGSVV 789
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVWGW 236
+S + GD T VT+ GV + VA+GG+H+L+L+ G VW W
Sbjct: 790 AWGANASGQL-------GDGGTTHGARAVTVR-GVSCARSVASGGQHSLVLACDGTVWTW 841
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPLLVR-QGSV-----NSSGKAG 287
G GQLG G+ V P + LE A G D L +R G+V N+SG+ G
Sbjct: 842 GENQRGQLGDGTTSARV-APGRVEGLEGIVAVAGGGDTSLALRSDGTVWAWGANASGQVG 900
Query: 288 RSYVKE 293
V++
Sbjct: 901 DGTVED 906
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 95/238 (39%), Gaps = 23/238 (9%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP---TEASVVKAAAGWA-HCV 117
F++A + G +WGS ++ GQ L GK G P + ++A V W H V
Sbjct: 1079 FSVAVAHDGTAFSWGS-NEYGQ--LGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAV 1135
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G + WG T G + ++ S G+ + T S +
Sbjct: 1136 ALMADGTLQAWG-------DNATGQLGDGTTTRRSSPGEIRGV-TRVTAVSTGAWHSLAL 1187
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ T A + GD T V + + +AAGG H++ + G VW WG
Sbjct: 1188 RLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLRDVVAIAAGGYHSVAVRSDGTVWTWG 1247
Query: 238 YGGEGQLGLG-SRIKMVPTP-HLIPCLEHAASGKDRPL-LVRQGSV-----NSSGKAG 287
Y GQLG G S + +P H + ++ G L L G+V N+SG+ G
Sbjct: 1248 YNTFGQLGDGTSESRALPVQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASGQLG 1305
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHA---ASG 268
+ VAAG H+L+L G VW WG GQLG G ++ + P P +P LE A+G
Sbjct: 168 DVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKP--VPGLEGVVALAAG 225
Query: 269 KDRPLLVR-QGSVNSSG 284
D L V G+V+S G
Sbjct: 226 FDFTLAVHADGAVSSWG 242
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 94/238 (39%), Gaps = 19/238 (7%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P R+ G + V GGG +LA G + WG A+ GQ + G + P +
Sbjct: 860 PGRVEGLEGIVAVAGGGD-TSLALRSDGTVWAWG-ANASGQ--VGDGTVEDRLTPRRIEA 915
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V+ A G +H ++V E G V+ WG A + G G + L
Sbjct: 916 LSDVMVIALGESHALAVGEDGTVWAWG-------ANASGQLGDGGETPSLLPARVKGLEG 968
Query: 163 EQAPPSDKRAGEEVVKRRKTSSA--REESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ + RA V+ T+ A ES G P V G++ V+AG
Sbjct: 969 VGSVAA-GRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLR--AVSAG 1025
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGKDRPLLV 275
H + L + G VW WG GQLG G+ V P + L E A+G+ + V
Sbjct: 1026 AHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESVAAGEQFSVAV 1083
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
++AAG +H+L L+ G VW WG GQLG +P +P LE S
Sbjct: 70 RIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLEDIVS 121
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 75/299 (25%), Positives = 116/299 (38%), Gaps = 63/299 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECV---------PSAKVTRDFGSAGSFQKDSTGK 156
+++ + G+VY WG EC+ P K R +K ++ K
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIR----IKECKKTASRK 152
Query: 157 Q--SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG---DEFFTLSPCLVTLNPG 211
S L +E AP S +V +++ G D SP L+ G
Sbjct: 153 SWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 212
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAA 266
+ +VAAGG H+ +L+ G ++GWG GQLGL P+L+ L +
Sbjct: 213 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPYLLKSLRSQKIVYIC 271
Query: 267 SGKDR-PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G+D L ++G V + G G S V +IACG +H++
Sbjct: 272 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 330
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 106/270 (39%), Gaps = 75/270 (27%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P R+ G ++ + G LA E G+L+ WG+ ++ GQ L +G T P P+
Sbjct: 188 VPVRVQGLEN-VSIIAVGAFHNLALEEDGRLLAWGN-NEYGQ--LGTGDTQPTSHPVPVH 243
Query: 102 --TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+ ++V AAG H ++T+ GEVY WG E G G D + K
Sbjct: 244 GLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGE----------HGRLGFGDNDKSSK--- 290
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ P V L I +V+
Sbjct: 291 -----------------------------------------MVPQKVNLLAEEDIIQVSC 309
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHAASGKDRPLLVR 276
GG H++ L+ G+++ +G G G+LG G ++ + P +IP E + + D
Sbjct: 310 GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEE---- 365
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ G+ K IACGGRH+ + +
Sbjct: 366 --------EEGKWSAKWIACGGRHTLAIVE 387
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V VKIT+ A GG H L + D G+ + WG GQ G
Sbjct: 82 PSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG----------------E 125
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
E RP VR+ V A + V+++A GG HS V+T
Sbjct: 126 EPLKDEMGRP--VRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT 166
>gi|47682199|gb|AAH69844.1| Rccd1 protein [Mus musculus]
Length = 377
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCTAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+K+A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 EKKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K A QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGASTELQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCTAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLE 263
+ ++ P L+ L+
Sbjct: 197 T-LEAELEPRLLEALQ 211
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEKKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVT 305
E G L V + A + + + +CG RH+AVVT
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVT 317
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 33/246 (13%)
Query: 19 ETVVYMWGYLPGT---SPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLI 73
E VY WG+ S + +P P + G K + CG LA + +G++
Sbjct: 84 ELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA---CGDSHCLAVTMAGEVQ 140
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
+WG + GQ L + + P+ V AAG H +VTE G++Y WGW
Sbjct: 141 SWGR-NQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGR- 198
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE--- 190
+G+ G ++ LP + + ++ R T + +
Sbjct: 199 ---------YGNLGLGDRN----DRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYT 245
Query: 191 -------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
GD L P V I++++ G RHT+ L+ G+++GWG+ GQ
Sbjct: 246 YGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQ 305
Query: 244 LGLGSR 249
+G+G+
Sbjct: 306 VGVGNN 311
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 81/208 (38%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+++G
Sbjct: 184 AVTEDGDLYGWGWGR-YGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 242
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 243 LYTYGWSK----------YGQLGH----GDFEDHLVPHKVEALKDSTISQISGGWRHTMA 288
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E + G+ SP V+ KI++VA G RHTL LS+ V+
Sbjct: 289 LTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVF 348
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG G + TP LI L
Sbjct: 349 SWGRGTSGQLGNGEIVDR-NTPVLIDAL 375
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 39/187 (20%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP+P + + A G +HC++VT AGEV +WG ++
Sbjct: 108 TPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWG---------------------RNQ 146
Query: 154 TGKQSALPTEQAP-PSDKRAGEEVVKR------RKTSSAREESE----------NPASGD 196
G+ TE + P +A E V + T++ E+ + N GD
Sbjct: 147 NGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGD 206
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
L P V+ G K+ VA G RHT+ +SD G ++ +G+ GQLG G + P
Sbjct: 207 RNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VP 265
Query: 257 HLIPCLE 263
H + L+
Sbjct: 266 HKVEALK 272
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 94/260 (36%), Gaps = 53/260 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
G ++A L +WG +D GQ L G + P F P SV+ A
Sbjct: 21 GASHSVALLTGNVLCSWGRGED-GQ--LGHGDAEDRLVPTVLSGFDAPAITSVICGAD-- 75
Query: 114 AHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
H + +E +VY+WGW DFG G F L +Q
Sbjct: 76 -HTTAYSEDELQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGLKIKQIA 124
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
D + S R ++ G +L P + V + +AAG HT
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+++ G ++GWG+G G LGLG R L+P + G+ L
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDR-----NDRLLPEKVSSVEGEKMVL------------- 226
Query: 287 GRSYVKEIACGGRHSAVVTD 306
+ACG RH+ V+D
Sbjct: 227 -------VACGWRHTITVSD 239
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + + + A GW H +
Sbjct: 281 GGWRHTMALTSEGKLYGWG-WNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTL 339
Query: 118 SVTEAGEVYTWG 129
+++E V++WG
Sbjct: 340 ALSEKKNVFSWG 351
>gi|405976795|gb|EKC41279.1| Regulator of chromosome condensation [Crassostrea gigas]
Length = 443
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 19/220 (8%)
Query: 67 SESGKLITWGSADD-EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
++ GK+ WG+ D G+ LTS E P LP E +V+K A+G H + +TE GE+
Sbjct: 160 TDEGKVFAWGNFRDANGKIGLTSDGIQEKPIEM-LPGE-TVIKIASGGDHLLCLTEKGEI 217
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQ-KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
Y+ G E +V F G + D K + + + + ++V + S
Sbjct: 218 YSCGCAEQGQLGRVAECFSVRGGRKGLDYILKPAIIRCLRHKSKKRVVFDDVYAGQYMSY 277
Query: 185 AREESENPASG---DEFFTLS---------PCLV-TLNPGVKITKVAAGGRHTLILSDMG 231
ARE+ + ++ L P V ++ VK+T V AG H + L G
Sbjct: 278 AREKDTGSIYAWGLNNYYQLGTNDLENKFVPVYVKAMSEDVKVTMVDAGQHHAICLDTAG 337
Query: 232 QVWGWGYGGEGQLGLG--SRIKMVPTPHLIPCLEHAASGK 269
+V+ G G G+LG G + K VP +P + A+G+
Sbjct: 338 KVYTVGRGEYGRLGHGDSNEEKRVPAILDLPPCKQVAAGQ 377
>gi|348686412|gb|EGZ26227.1| hypothetical protein PHYSODRAFT_486876 [Phytophthora sojae]
Length = 289
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCV 117
G LA ++SG+++ WG + Q+ +++G+ P PT +V+ AAG H +
Sbjct: 86 GSNHVLALTDSGRVVAWGW-NASAQAAVSAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSL 144
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ +G V+ WG E FG G S + T+ +P + E +
Sbjct: 145 ALDSSGGVWAWGCNE----------FGQ--------LGINSEVETQHSPRRVALSAE--I 184
Query: 178 KRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV--KITKVA 218
+ R ++ S ++ E FT P +V GV + +VA
Sbjct: 185 RVRDIAAGWAHSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQGVDSEAVQVA 244
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
G HT L+ G ++ WG+G +GQL R + + LIP
Sbjct: 245 CGNWHTAALTASGDLYTWGWGKDGQLVRPWRPRHLHVRALIP 286
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 92/256 (35%), Gaps = 98/256 (38%)
Query: 58 GGCGFAL-ATSESGKLITWGSADDEGQSYLTSGKHGETPEP-------FPLPTEASVVKA 109
GG F + ++SG+++ WG A +GE P L
Sbjct: 35 GGDTFTVGVVADSGEVVGWGRA-----------FYGELPADSAVGKGVVTLQVSERCSAV 83
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H +++T++G V WGW + QA S
Sbjct: 84 ACGSNHVLALTDSGRVVAWGWN-----------------------------ASAQAAVS- 113
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
AGE+VV+ P +V V+I +VAAGG H+L L
Sbjct: 114 --AGEDVVR-----------------------VPTVVEFPTPVQIVQVAAGGMHSLALDS 148
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G VW WG GQLG+ S ++ +P + A S + R
Sbjct: 149 SGGVWAWGCNEFGQLGINSEVETQHSPRRV-----ALSAEIR------------------ 185
Query: 290 YVKEIACGGRHSAVVT 305
V++IA G HSA+V+
Sbjct: 186 -VRDIAAGWAHSALVS 200
>gi|147919953|ref|YP_686293.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
gi|110621689|emb|CAJ36967.1| predicted regulator of chromosome condensation [Methanocella
arvoryzae MRE50]
Length = 439
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 38/214 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG G+ + G + T G+ +D GQ L + +P ++V + AG H +
Sbjct: 95 GGYGYTVILRNDGTVWTSGN-NDAGQ--LGQRNRADNAVFTQIPNMSNVARIDAGEGHVL 151
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++ G V++WG FG G+ K TG+ + + Q S G
Sbjct: 152 ALKVDGTVWSWG----------DNSFGQLGNGSKALTGEPARVMGVQGIRSIAAGGRH-- 199
Query: 178 KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLIL 227
S A E A GD F + +P V +N ++T VAAG H+L L
Sbjct: 200 -----SIATYGMEAYAWGDNLFGQLGDGTYNSSNTPVKVRIN---EVTDVAAGEYHSLAL 251
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+ G VW WG GQLG G +P L+P
Sbjct: 252 LEDGTVWAWGGNDYGQLGDG-----IPNNSLVPV 280
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 72/193 (37%), Gaps = 19/193 (9%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G LA G + +WG D L +G T EP + + AAG H ++
Sbjct: 146 GEGHVLALKVDGTVWSWG---DNSFGQLGNGSKALTGEPARVMGVQGIRSIAAGGRHSIA 202
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE--- 175
T E Y WG FG G +S+ + + +D AGE
Sbjct: 203 -TYGMEAYAWG----------DNLFGQLGDGTYNSSNTPVKVRINEV--TDVAAGEYHSL 249
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ T A ++ GD S V + +AA R++L L G VW
Sbjct: 250 ALLEDGTVWAWGGNDYGQLGDGIPNNSLVPVKCGNLRNVKTIAASDRYSLALKYDGTVWA 309
Query: 236 WGYGGEGQLGLGS 248
WGY G G LG GS
Sbjct: 310 WGYNGNGVLGTGS 322
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 105/284 (36%), Gaps = 102/284 (35%)
Query: 30 GTSPEKSPILSPIPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
G PE+ P L + L CG + +LA G++ WG+A EGQ L
Sbjct: 35 GEQPERIPALETLHVALVSCGKEH-----------SLAVCHKGRVFAWGAAS-EGQ--LG 80
Query: 88 SGKHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G+ ET P+ + +++ A G H ++++E G+V++WG
Sbjct: 81 IGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWG--------------- 125
Query: 145 SAGSFQKDSTGKQSALPTE---QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
K+S G Q L E QA P R+ E
Sbjct: 126 ------KNSHG-QLGLGKEFPSQASPQRVRSLE--------------------------- 151
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
G+ + +VAAGG H+ LS G +GWG GQL L
Sbjct: 152 ---------GIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSG------------- 189
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+A + +P+LV G V I+CG H+AV+T
Sbjct: 190 -NNAPVQRYKPVLV--------GALKTLSVVFISCGYEHTAVLT 224
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLVGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 60/207 (28%)
Query: 43 PARLCGGDSWKDVC-GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
P RL +++ C G +LA + G++ +WGS + GQ ++G P P +
Sbjct: 80 PQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS-NAVGQ-LGHDAENGRQPTPRMIK 137
Query: 102 TEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+ VV+ A+G HC+++T GE+Y WG + S+ + G S
Sbjct: 138 AIGAKHVVQIASGQYHCLALTNNGELYAWG----------------SNSYGQLGIGTTS- 180
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
E+ P P L+ GV I +A
Sbjct: 181 ---EKVP-----------------------------------MPTLIQSLAGVPIAFIAC 202
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGL 246
GG H+ +S G ++GWG GQLGL
Sbjct: 203 GGNHSFAVSKSGAIFGWGKNTFGQLGL 229
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL--EHA---ASG 268
IT ++ G H+L L++ GQV+ WG GQLG + PTP +I + +H ASG
Sbjct: 91 ITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASG 150
Query: 269 KDRPL-LVRQGSV-----NSSGKAGRSYVKE------------------IACGGRHSAVV 304
+ L L G + NS G+ G E IACGG HS V
Sbjct: 151 QYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAV 210
Query: 305 T 305
+
Sbjct: 211 S 211
Score = 45.8 bits (107), Expect = 0.027, Method: Composition-based stats.
Identities = 56/208 (26%), Positives = 84/208 (40%), Gaps = 51/208 (24%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAAAGWAHCV 117
LA + +G+L WGS SY G G T E P+PT + A G H
Sbjct: 155 LALTNNGELYAWGS-----NSYGQLGI-GTTSEKVPMPTLIQSLAGVPIAFIACGGNHSF 208
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+V+++G ++ GW + FG G +S + L T ++ +
Sbjct: 209 AVSKSGAIF--GWGK--------NTFGQLGLNDLNSRCYPTQLRTLRS-----------L 247
Query: 178 KRRKTSSAREESENPASGDEFFTLSP----------CLVTLNP-------GVKITKVAAG 220
R S + S + FT C + P G KIT++A G
Sbjct: 248 GVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACG 307
Query: 221 GRHTL-ILSDMGQVWGWGYGGEGQLGLG 247
RHTL + G+++G+G GG GQLG+G
Sbjct: 308 RRHTLAFVPSRGKIYGFGLGGVGQLGIG 335
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 63/193 (32%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ + P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRAG 173
+++ G+ +TWG K+S G Q L E QA P R+
Sbjct: 150 LALAADGQFFTWG---------------------KNSHG-QLGLGKEFPSQASPQRVRSL 187
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
E G+ + +VAAGG H+ LS G V
Sbjct: 188 E------------------------------------GIPLAQVAAGGAHSFALSLSGAV 211
Query: 234 WGWGYGGEGQLGL 246
+GWG GQLGL
Sbjct: 212 FGWGMNNAGQLGL 224
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 117/313 (37%), Gaps = 90/313 (28%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADD 80
WGY P S L I A ++CG S + V CG ++ E G++ T G +
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG-LNT 62
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 63 KGQ--LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWG----------- 109
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
AGS G+ + TE E V R +++
Sbjct: 110 -----AGS-----DGQLGLMTTE----------ESVAVPRLIQKLNQQT----------- 138
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL-- 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 -------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 185
Query: 259 ----IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRS-----------------YVK 292
IP + AA G L G+V N++G+ G S V
Sbjct: 186 SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVV 245
Query: 293 EIACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 246 YISCGEEHTAVLT 258
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGLDCKKQT------------SPQLIKSLVGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|405354387|ref|ZP_11023754.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397092349|gb|EJJ23118.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 837
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 100/266 (37%), Gaps = 26/266 (9%)
Query: 40 SPIPARLCGGDSWKDVCGGG---CGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
S +P ++ G V GG F +A E G + +WG+ +Y H P
Sbjct: 576 SSVPVQVLGITGATAVAAGGDTLLAFTVALREDGTVWSWGN------NYFGMLGHPAWPS 629
Query: 97 ----PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+P V AAG H V++ + G V++WG G + Q+D
Sbjct: 630 TTQGAVQVPGLMDVTAIAAGNLHAVALRKNGSVWSWG-------RNSAGQLGDGTNIQRD 682
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S L +A + R + T A +++ GD F P +
Sbjct: 683 SPVPLRELANVKAITA-GRDFAVALHDDGTVWAWGANDSGQLGDGTFATRPLPQQVQGLT 741
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASG 268
+ V AG HTL L + G VW WG GQLG G+R PTP + AA
Sbjct: 742 GVVAVDAGDDHTLALRNDGTVWAWGNNDLGQLGDGTRTTQ-PTPVQMQGFRKVSAVAAGF 800
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEI 294
+L+ G+V G G S V I
Sbjct: 801 ISSVVLLENGTVWGWGAYGTSGVDLI 826
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 26/219 (11%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLP 101
P RL G K V G A+ + G L TWGS + L G + + P P
Sbjct: 478 PVRLAGLTEGKTVSVGSW-HAVLLRQDGSLRTWGSGYSD---VLGDGTTYSKDAAPVQAP 533
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+ V AA + H V+V G V++WG + D G+F+ S Q
Sbjct: 534 ELSGVKAVAAAYEHSVAVRGDGTVWSWGLNQ--------DDQLGDGTFRPSSVPVQVLGI 585
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL--SPCLVTLNPG-------V 212
T + G+ ++ T + RE+ + G+ +F + P + G +
Sbjct: 586 T--GATAVAAGGDTLLAF--TVALREDGTVWSWGNNYFGMLGHPAWPSTTQGAVQVPGLM 641
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+T +AAG H + L G VW WG GQLG G+ I+
Sbjct: 642 DVTAIAAGNLHAVALRKNGSVWSWGRNSAGQLGDGTNIQ 680
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 31/209 (14%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A+A ++G + +WG + GQ L G + + P PL A+V AG V++ +
Sbjct: 653 AVALRKNGSVWSWGR-NSAGQ--LGDGTNIQRDSPVPLRELANVKAITAGRDFAVALHDD 709
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---RAGEE---V 176
G V+ WG D G G D T LP + + AG++
Sbjct: 710 GTVWAWG----------ANDSGQLG----DGTFATRPLPQQVQGLTGVVAVDAGDDHTLA 755
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ T A ++ GD T P V + K++ VAAG +++L + G VWGW
Sbjct: 756 LRNDGTVWAWGNNDLGQLGDGTRTTQPTPVQMQGFRKVSAVAAGFISSVVLLENGTVWGW 815
Query: 237 G-YGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G YG G + ++P P + H
Sbjct: 816 GAYGTSG-------VDLIPRPRQVRVSSH 837
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 102/250 (40%), Gaps = 31/250 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +A + G + TWG D+ +G+ + P +P ASVV AAG + V+
Sbjct: 249 GDSHTVALLKDGSVWTWG--DNRSGQLGDAGRESQNHIPAQVPGLASVVAIAAGGSRTVA 306
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP-TEQAPPSDKRAGEEVV 177
V + G V+TWG ++ S ++D +P +D VV
Sbjct: 307 VRQDGTVWTWGTKQ---------------SNRQDFNPTPVQVPGLTDVIAADASDNHVVV 351
Query: 178 KRRKTSSAREESENPASG--DEFFTLSPCLVTLNPGVKITK-VAAGGRHTLILSDMGQVW 234
R + N G ++ T+ P V P + K ++AG HT+ L G VW
Sbjct: 352 LRTDGTVWGWGRANLLGGSTQDWLTM-PVQV---PDLADCKALSAGDEHTVALRADGTVW 407
Query: 235 GWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
WG GQLG G S K V L+ ++ A+G D + + G S G +Y
Sbjct: 408 VWGTDDFGQLGNGGVPSDAKPVQAQGLM-AVKAVAAGNDWTVAI--GEDGSVWAWGSNYY 464
Query: 292 KEIACGGRHS 301
++ G R S
Sbjct: 465 GQLGDGSRRS 474
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 106/276 (38%), Gaps = 53/276 (19%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
IPA++ G S + GG +A + G + TWG+ Q + P P +P
Sbjct: 284 IPAQVPGLASVVAIAAGGS-RTVAVRQDGTVWTWGTKQSNRQDF--------NPTPVQVP 334
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+ A A H V + G V+ WG + ST +P
Sbjct: 335 GLTDVIAADASDNHVVVLRTDGTVWGWG----------------RANLLGGSTQDWLTMP 378
Query: 162 TEQAPPSDKRA---GEEVVKRRKTSSAREESENPASG-DEFFTLSPCLVTLNPG------ 211
+ +D +A G+E T + R + G D+F L V +
Sbjct: 379 VQVPDLADCKALSAGDE-----HTVALRADGTVWVWGTDDFGQLGNGGVPSDAKPVQAQG 433
Query: 212 -VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS--- 267
+ + VAAG T+ + + G VW WG GQLG GSR + TP + L +
Sbjct: 434 LMAVKAVAAGNDWTVAIGEDGSVWAWGSNYYGQLGDGSR-RSRSTPVRLAGLTEGKTVSV 492
Query: 268 GKDRPLLVRQ-GSVNSSGKA-------GRSYVKEIA 295
G +L+RQ GS+ + G G +Y K+ A
Sbjct: 493 GSWHAVLLRQDGSLRTWGSGYSDVLGDGTTYSKDAA 528
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDR 271
T +A G HT+ L G VW WG GQLG R P +P L A+G R
Sbjct: 244 TAIAVGDSHTVALLKDGSVWTWGDNRSGQLGDAGRESQNHIPAQVPGLASVVAIAAGGSR 303
Query: 272 PLLVRQ 277
+ VRQ
Sbjct: 304 TVAVRQ 309
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 83/220 (37%), Gaps = 21/220 (9%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A E G + TWGS S TP P T A+ + A G +H V++ + G
Sbjct: 204 ALKEDGSIWTWGSNAASQLGADISAGSRVTPMQVPGLTGATAI--AVGDSHTVALLKDGS 261
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
V+TWG + G AG ++ Q +P + + G V R+ +
Sbjct: 262 VWTWG-------DNRSGQLGDAGRESQNHIPAQ--VPGLASVVAIAAGGSRTVAVRQDGT 312
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG----YGG 240
++ +F +P V + + A H ++L G VWGWG GG
Sbjct: 313 VWTWGTKQSNRQDF---NPTPVQVPGLTDVIAADASDNHVVVLRTDGTVWGWGRANLLGG 369
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
Q L +++ P L C +A + L G+V
Sbjct: 370 STQDWLTMPVQV---PDLADCKALSAGDEHTVALRADGTV 406
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 121/303 (39%), Gaps = 44/303 (14%)
Query: 10 ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLC---GGDSWKDVCG--GGCGFAL 64
EN + K+ ++ WG E + + I +LC S KDV GC +L
Sbjct: 306 ENHSLALKKDGTIWAWG-----DNEWGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSL 360
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + G + +WG+ + GQ L +G ++ P + VV A G AH +++ + G
Sbjct: 361 ALKKDGTVWSWGN-NYYGQ--LGNGNSIDSYVPVQVRGLKDVVAIATGNAHSLALKKDGT 417
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK---RAGEE---VVK 178
V+ WG +FG G + T K S +P + D AG + K
Sbjct: 418 VWAWG----------NNEFGQLG----NGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFK 463
Query: 179 RRKTSSAREESE-----NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQ 232
+ T A +E N + G + P V G+K + VAAG H+L L G
Sbjct: 464 KDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQV---KGLKDVVAVAAGSVHSLALKKDGT 520
Query: 233 VWGWGYGGEGQLGLGSRIKMVP--TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
+W WG G LG VP L + AA +L + G+V + G+
Sbjct: 521 IWAWGSNYHGLLGNDIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDL 580
Query: 291 VKE 293
+ E
Sbjct: 581 LNE 583
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 127/316 (40%), Gaps = 54/316 (17%)
Query: 18 KETVVYMWGYLPGTSPEK---SPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
K+ V+MW Y + + SP+P ++ G KDV G +LA + G +
Sbjct: 212 KDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGL---KDVVAIAAGRYHSLALKKDGTV 268
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
WG+ + GQ L +GK ++ +P + VV AAG H +++ + G ++ WG
Sbjct: 269 WAWGN-NYYGQ--LGNGKSEDSYDPVQVKNLKDVVAIAAGENHSLALKKDGTIWAWG--- 322
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG----EEVVKRRKTSSAREE 188
++G G +S ++ +P + D A E + +K +
Sbjct: 323 -------DNEWGQLG----NSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSW 371
Query: 189 SEN----PASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
N +G+ + P V G+K + +A G H+L L G VW WG GQ
Sbjct: 372 GNNYYGQLGNGNSIDSYVPVQVR---GLKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQ 428
Query: 244 LGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVRQ-GSV------------NSSGKAG 287
LG G+ K P + L+ A+G D L ++ G+V N SG G
Sbjct: 429 LGNGTN-KSSFVPVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYG 487
Query: 288 RSYVKEIACGGRHSAV 303
+ Y + G V
Sbjct: 488 QYYAVPVQVKGLKDVV 503
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 51/252 (20%)
Query: 18 KETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCG--GGCGFALATSESGK 71
K+ ++ WG L G E+S + P ++ G KDV G +L + G
Sbjct: 517 KDGTIWAWGSNYHGLLGNDIERSFV----PVQVKGL---KDVVAIAAGSNHSLVLKKDGT 569
Query: 72 LITWGSA----DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
+ WG +E + S P + VV AAG H + + + G V+
Sbjct: 570 VWAWGEVWFDLLNENSRLVYS------SVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWA 623
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA---GE---EVVKRRK 181
WG FG G+ ++ K S +P + D A GE +K+
Sbjct: 624 WG----------DNFFGQLGNSPRE---KYSLVPVQVKGLKDILAIATGEWHSLAIKKDG 670
Query: 182 TSSAREESE-----NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWG 235
T A E+ N SG + ++ P V G+K + ++AG H+L L G VWG
Sbjct: 671 TVWAWGENSTGQLGNETSGKDKYSYVPVQV---KGIKDVLAISAGSYHSLALKKDGTVWG 727
Query: 236 WGYGGEGQLGLG 247
WG GQLG G
Sbjct: 728 WGANARGQLGNG 739
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 100/272 (36%), Gaps = 86/272 (31%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + G++ +WGS + T + TP +VV+ A+G H ++
Sbjct: 97 GTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLA 156
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T +GE+++WG +G G L T GE+VV
Sbjct: 157 LTNSGELFSWG----------ANGYGQLG------------LGT---------TGEKVV- 184
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+P LV G+ I +A GG H+ +S G ++GWG
Sbjct: 185 -----------------------TPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGK 221
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKD-RPLLVRQGSVNSSGKAGR---- 288
GQLGL + P + L + + G D L ++G V + G AG
Sbjct: 222 NTFGQLGLNDLVSRC-FPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCG-AGTFGQL 279
Query: 289 -------------------SYVKEIACGGRHS 301
S + +IACG RH+
Sbjct: 280 GHGTCSNEILPRMVFELMGSKITQIACGRRHT 311
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 103/293 (35%), Gaps = 93/293 (31%)
Query: 22 VYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKL 72
VY WG L G E+ +L P C S V CG + L ++ GKL
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQ--VLLPREMDWCHSSS---VQQAACGTSHTLLLTKDGKL 57
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ G+ D + T + P+ V + G H +++T G+V++W
Sbjct: 58 FSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSW---- 113
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
GS G + L T P ++K T +
Sbjct: 114 --------------GSNSIGQLGHDTDLQTYTTP--------RMIKTIATKT-------- 143
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+ ++A+G H+L L++ G+++ WG G GQLGLG+ +
Sbjct: 144 ---------------------VVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEK 182
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
V TP L+ L AG + IACGG HS V+
Sbjct: 183 VVTPTLVKSL-----------------------AGIP-IAFIACGGNHSFAVS 211
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 49/246 (19%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG + + V CGG L E G++ T G
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLL--EDGEVYTCG-L 514
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + +V A G +H +++++ G++++WG
Sbjct: 515 NTKGQ--LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGA-------- 564
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ +F
Sbjct: 565 -----GSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADGQF 612
Query: 199 FT------------------LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
FT SP V G+ + +VAAGG H+ LS G V+GWG
Sbjct: 613 FTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 672
Query: 241 EGQLGL 246
GQLGL
Sbjct: 673 AGQLGL 678
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 5/195 (2%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+ + CG +LA S+ G+L +WG+ D +T+ P + ++++ +
Sbjct: 538 QHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVS 597
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G HC+++ G+ +TWG + + ++F S S Q+ +P Q
Sbjct: 598 CGNWHCLALAADGQFFTWG-KNSHGQLGLGKEFPSQTSPQR--VRSLEGIPLAQVAAGGA 654
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + DE SPC V L K+ ++ G HT +L+
Sbjct: 655 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKS 714
Query: 231 GQVWGWGYGGEGQLG 245
G V+ +G G GQLG
Sbjct: 715 GGVFTFGAGSCGQLG 729
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI
Sbjct: 540 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLI 585
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V ++ACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 307
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 71/277 (25%), Positives = 101/277 (36%), Gaps = 88/277 (31%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKRPEQVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG F + G Q LP
Sbjct: 97 LTLNDKGQVYAWG-------------FAADG---------QLGLP--------------- 119
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G E +T P + V+I +VA G H+L LS +V+ W
Sbjct: 120 ------------------GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG +K +P LI L + AA G L G+V N G+
Sbjct: 162 GQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVT 305
G + YV I+CG H+A +T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALT 258
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 38/256 (14%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A L ++ G++ WG A D + ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSAL--PTEQAP 166
G+ H +++++ EV++WG + G +K ++ + +S L P Q
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + R + DE P L+ KI ++ G HT
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+ G V+ +G GG GQLG S T H I R + G++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNS------TGHEI---------NPRKVFELMGNI------ 295
Query: 287 GRSYVKEIACGGRHSA 302
V +IACG +H++
Sbjct: 296 ----VTQIACGRQHTS 307
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 71/277 (25%), Positives = 101/277 (36%), Gaps = 88/277 (31%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKRPEQVGALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ + G+VY WG F + G Q LP
Sbjct: 97 LTLNDKGQVYAWG-------------FAADG---------QLGLP--------------- 119
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G E +T P + V+I +VA G H+L LS +V+ W
Sbjct: 120 ------------------GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSW 161
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQGSV-----NSSGK 285
G GQLGLG +K +P LI L + AA G L G+V N G+
Sbjct: 162 GQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQ 221
Query: 286 AGRS-----YVKE------------IACGGRHSAVVT 305
G + YV I+CG H+A +T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALT 258
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 38/256 (14%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
+++ CG A L ++ G++ WG A D + ++ P ++ +V+ A
Sbjct: 84 QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSAL--PTEQAP 166
G+ H +++++ EV++WG + G +K ++ + +S L P Q
Sbjct: 144 CGYYHSLALSKGSEVFSWGQNK-------HGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + R + DE P L+ KI ++ G HT
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+ G V+ +G GG GQLG S T H I R + G++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNS------TGHEI---------NPRKVFELMGNI------ 295
Query: 287 GRSYVKEIACGGRHSA 302
V +IACG +H++
Sbjct: 296 ----VTQIACGRQHTS 307
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V ++ACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 307
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V ++ACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 307
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|388855483|emb|CCF50929.1| uncharacterized protein [Ustilago hordei]
Length = 546
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 41/189 (21%)
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR-------------------ECVPSAK 138
P ++ +V AA G +H + +T +G VY+ G E P K
Sbjct: 123 LPSGSKGQIVFAACGRSHTLLITSSGSVYSAGLNTSGQCAHPESQTVPIFTRIETAPFIK 182
Query: 139 -----VTRDFGSAGSFQKDSTGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
+ G S ++GK + +E+ + R GE TSS R
Sbjct: 183 ERDPIIAASCGLTFSMLLTASGKVYTMGSSEKGQLGNGRTGEHF-----TSSNRLA---- 233
Query: 193 ASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
F T S P LV KIT++A G +HT+ + + G V+ WG+GG G+LGLGS+
Sbjct: 234 -----FNTFSEPFLVKQLADKKITQIACGQQHTIAMDEDGYVYVWGFGGYGRLGLGSQQD 288
Query: 252 MVPTPHLIP 260
+ TP L+P
Sbjct: 289 QL-TPTLVP 296
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 75/291 (25%), Positives = 117/291 (40%), Gaps = 58/291 (19%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K V GCG + + G + T G +D GQ L K + PE ++V +
Sbjct: 34 KKVQDVGCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVS 90
Query: 111 AGWAHCVSVTEAGEVYTWGW----RECVPSA----KVTRDFGSAGSFQ--KDSTGKQSAL 160
G AH +++ + G+VY WG + +P +V R+ S Q + + G +L
Sbjct: 91 CGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSL 150
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAA 219
+ G EV S + + G E SP L+ G+ T+VAA
Sbjct: 151 ALSK--------GSEVF-----SWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAA 197
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PL 273
GG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 274 LVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 44.3 bits (103), Expect = 0.065, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L A G
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G + ++A GG HS V+
Sbjct: 146 YYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 79/311 (25%), Positives = 118/311 (37%), Gaps = 64/311 (20%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
E++ ILSP + +S ++ CG LA +E G+L GS +D GQ G
Sbjct: 18 EENYILSP--EEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS-NDFGQL----GHD 70
Query: 92 GETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWRECVP-----------SAK 138
G + +P S+V A G AH +++ E G++YTWG C K
Sbjct: 71 GCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQYKPK 130
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
+ + S Q K T GE T + E +
Sbjct: 131 IVKTLASMLLVQISCGYKHCMALTNH--------GE-----LYTWGSNEFGQLGLGLGPG 177
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
P LV G+ I+ +A GG H+ ++S G V+GWG GQLG+ S+ + L
Sbjct: 178 NVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQL 237
Query: 259 IPC----LEHAASGKD-RPLLVRQGSVNSSGKAGR-----------------------SY 290
+++ A G+D L G V + G AG S
Sbjct: 238 KTIRTVKVKYIAGGEDFSVFLTYDGGVFTCG-AGMYGQLGHGSFSNEIVPRKVLELMGST 296
Query: 291 VKEIACGGRHS 301
V ++ CG RH+
Sbjct: 297 VTQVTCGRRHT 307
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYCHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 125/324 (38%), Gaps = 65/324 (20%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEG 82
+G L ++ +L P + +DV GCG + + G + T G +D G
Sbjct: 9 YGQLGLGGIDEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLG 64
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------R 131
Q L K + PE ++V + G AH +++ + G+VY WG
Sbjct: 65 Q--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 132 ECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
EC+ +V R+ S Q + + G +L +A + + ++++
Sbjct: 123 ECI---RVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQT 179
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 180 ------------SPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227
Query: 250 IKMVPTPHLIPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR--------------- 288
P+L+ L + G+D L ++G V + G G
Sbjct: 228 NDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 289 -------SYVKEIACGGRHSAVVT 305
S V +IACG +H++
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFV 310
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 76/283 (26%), Positives = 112/283 (39%), Gaps = 73/283 (25%)
Query: 13 KMEECKETVVYMWG----YLPGTS-PEKS--PILSPIPA--------RLCGGDS------ 51
+ + KE+ VY+WG Y G S PEK P L+P A RL GDS
Sbjct: 398 QTDHVKESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRP 457
Query: 52 ----WKDVCG--------GGCGFALATSESGKLITWGSADDEGQSYLTSGKH--GETPEP 97
++ C G G LA + G++ +WG D L G H ++P+
Sbjct: 458 KLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGD---YGKLGHGNHVTQKSPKL 514
Query: 98 FPLPTEASVVKA-AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--------- 147
P + VV+ A G+ H ++T G +YTWG D+G G
Sbjct: 515 ILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWG----------DGDYGRLGHGDNHSRSI 564
Query: 148 -SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT---SSAREESENPASGDEFFTLSP 203
+ KD TG S S + V+ + T S ++ GD P
Sbjct: 565 PTLVKDITGVGSV--------SCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRP 616
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG---GEGQ 243
+++ G+ I KV + +L L+ +GQV+ WG G G GQ
Sbjct: 617 KVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQ 659
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 25/92 (27%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I +AAG H L L+ G VW WG +GQLGLG + P PCL + GK
Sbjct: 3704 IEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTL-----PQREPCLISSLQGKG--- 3755
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+++I+ G HSA T
Sbjct: 3756 -----------------IRQISAGHNHSAAWT 3770
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 73/200 (36%), Gaps = 67/200 (33%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHC 116
G +LA +E+G++ +WG D Y G + P EA V+ A G H
Sbjct: 3502 GHSLALTETGEVFSWGDGD-----YGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHS 3556
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
VT G+++T+G D G G S+K+ +V
Sbjct: 3557 AIVTVDGKLFTFG----------ASDLGRLG----------------LGNTSNKKLPAQV 3590
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWG 235
L P +V L +A G HT++++ D VW
Sbjct: 3591 T----------------------ALQPIMVEL--------IACGANHTVVVTTDRESVWT 3620
Query: 236 WGYGGEGQLGLG-SRIKMVP 254
+G G GQLGLG + KM P
Sbjct: 3621 FGEGEYGQLGLGRTTAKMTP 3640
Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 85/229 (37%), Gaps = 47/229 (20%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
+TS K E P+ L + +++ ++ E YTWG + S ++
Sbjct: 3370 ITSTKENEILPPWKLAMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLAESGRLVLQ 3429
Query: 143 FGSAGSFQKDST---GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
SF K G S E V+ + S R N D+
Sbjct: 3430 PTLTSSFSKAKQIHCGHNSTFVIEH--------DGTVLACGEGSYGRLGQGN---SDDLP 3478
Query: 200 TLSPCLVTLNPGVKITKVAAGGR---HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
L P +T G +T++A H+L L++ G+V+ WG G G+LG G+ + P
Sbjct: 3479 RLRP--ITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRP 3535
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
I L G+D V +ACG +HSA+VT
Sbjct: 3536 RQIEALR----GED--------------------VLHVACGHKHSAIVT 3560
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 120/308 (38%), Gaps = 65/308 (21%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+L P + +DV GCG + + G + T G +D GQ L K + P
Sbjct: 22 VLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKP 75
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFG 144
E ++V + G AH +++ + G+VY WG EC+ +V R+
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIK 132
Query: 145 SAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
S Q + + G +L +A + + ++++ S
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA------------S 180
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL P+L+ L
Sbjct: 181 PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSL 239
Query: 263 E-----HAASGKDR-PLLVRQGSVNSSGKAGR----------------------SYVKEI 294
+ G+D L ++G V + G G S V +I
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQI 299
Query: 295 ACGGRHSA 302
ACG +H++
Sbjct: 300 ACGRQHTS 307
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYCHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|209875367|ref|XP_002139126.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209554732|gb|EEA04777.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 1864
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
E E + ++++SPC+V KI+++ G HTL LSD G ++ WG G G LG G
Sbjct: 141 EEEYLDKNESWYSISPCIVKFPSNTKISRICCGANHTLALSDNGHLYSWGVGQFGCLGTG 200
Query: 248 S 248
S
Sbjct: 201 S 201
Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 26/208 (12%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV----SVTEAG-EV 125
+L WG + + + P P + V + + G+ H S+TE+G +V
Sbjct: 59 QLYAWGENTNNVLGFGIDTDKVDLPTRVPFFSIYDVFQVSCGYLHTAVLIKSITESGGKV 118
Query: 126 YTWGW--RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
YT G R + + +FG + + S P PS+ + T
Sbjct: 119 YTMGLGNRGRLGYTRSDTEFGLEEEYLDKNESWYSISPCIVKFPSNTKISRICCGANHTL 178
Query: 184 SAREESE-------------NPASGDEFFTLSPCLVTL-NPGVKITKVAAGGRHTLILSD 229
+ + ++ D FF P + + N +K+ +AAG RH+L ++
Sbjct: 179 ALSDNGHLYSWGVGQFGCLGTGSTEDVFF---PTKIEISNNSLKVQHIAAGSRHSLCCTE 235
Query: 230 MGQVWGWGYGGEGQLGLG--SRIKMVPT 255
G ++ WG G+LG+G + IK+ PT
Sbjct: 236 NGNLFAWGSNANGRLGIGGVNGIKLKPT 263
Score = 40.4 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 95/288 (32%), Gaps = 106/288 (36%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+ P + PI CG W +C C + SG TWG D GQ L +G
Sbjct: 542 SEPNEVKFSGPIRRVACG--YWHTLC---CDY------SGNCFTWGRGD-YGQ--LGTGA 587
Query: 91 HGETPEPFPLPTEASVVKAAAG--WAHCVSVT-----------EAGEVYTWGWRECVPSA 137
EP + + +V+ G ++ C+ T +G+++ WG
Sbjct: 588 ICNMYEPVGIISLNNVIDVYGGESYSACIIATGITISKDLDTINSGDLWIWG-------- 639
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
DFG G D GK A P
Sbjct: 640 --NGDFGKLG-LGDDVNGKCIAAPR----------------------------------- 661
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
LN G I KV+ G HTL L+ G + WG G G+LG+G+
Sbjct: 662 ---------YLNLGYPIVKVSLGTVHTLALTANGNLITWGAGYYGRLGVGT--------- 703
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ +RP++++ G + +IA G HS V+
Sbjct: 704 --------TNNHNRPIIIK-------FPIGDVRISDIAVGTDHSMAVS 736
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|71020563|ref|XP_760512.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
gi|46100407|gb|EAK85640.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
Length = 548
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 84/190 (44%), Gaps = 45/190 (23%)
Query: 100 LPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWR----------ECVP------------ 135
LPT A+ +V AA G +H + +T +G VY+ G + VP
Sbjct: 123 LPTGANGQIVYAACGRSHTLLLTASGSVYSAGLNTSGQCGHPESQTVPIFTRIETAPFIK 182
Query: 136 --SAKVTRDFGSAGSFQKDSTGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
A V G S +GK + +E+ + R GE TSS R
Sbjct: 183 ERDAIVAASCGLTFSMLLTQSGKVYTMGSSEKGQLGNGRTGEHF-----TSSNRLA---- 233
Query: 193 ASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI- 250
F T S P LV KI +A G +HT+ L D G V+ WG+GG G+LGLGS+
Sbjct: 234 -----FNTFSEPFLVKQLADKKIVHIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQD 288
Query: 251 KMVPTPHLIP 260
++VPT L+P
Sbjct: 289 QLVPT--LVP 296
>gi|307186651|gb|EFN72134.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 815
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 82/228 (35%), Gaps = 75/228 (32%)
Query: 22 VYMWGYLPGTSPEKSPILSP--IPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGS 77
VY WGY K L+ +PA++ G D+ +LA ++SGK+ WGS
Sbjct: 397 VYSWGYNDNCRLGKLDSLATTYLPAKMDSLRGKRIIDIASNNYN-SLALTDSGKIYVWGS 455
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ T + P + + + A G + +++T G++Y+WG
Sbjct: 456 VN-------------FTKKSLPDQCQVNPCQIACGMSFVMALTNDGKLYSWG-------- 494
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
T +G G SEN
Sbjct: 495 --TNTYGQLGI---------------------------------------SSEND----- 508
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
L PCL+T V I K+ G H+L L+ G ++ WG EGQLG
Sbjct: 509 ---LYPCLITSLENVHIDKIVCGSEHSLALTSKGHIYSWGSNHEGQLG 553
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSAD 79
+Y WG + +S + +P D+ CG FA+A ++ GKL +WG +
Sbjct: 61 IYTWGNIKYSSSYYDIVSTPYQVNF-------DIIHIACGSSFAMALNKDGKLYSWG-LN 112
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ + S K P ++VK G H +++ G++Y+WG
Sbjct: 113 NYGQLGINSTKENYDPCLITSLIHVTIVKVVCGLEHSLALNSEGKIYSWG 162
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 74/211 (35%), Gaps = 66/211 (31%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
++ + RL G C LA ++SGK+ TWG+ Y
Sbjct: 30 INSLSTRLTGEHITDIACNNY--ICLALTDSGKIYTWGNIKYSSSYYDIVST-------- 79
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
P ++ A G + +++ + G++Y+WG ++G G
Sbjct: 80 PYQVNFDIIHIACGSSFAMALNKDGKLYSWG----------LNNYGQLG----------- 118
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
+S +E + PCL+T V I KV
Sbjct: 119 -----------------------INSTKENYD------------PCLITSLIHVTIVKVV 143
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G H+L L+ G+++ WG +GQLG G +
Sbjct: 144 CGLEHSLALNSEGKIYSWGSNSKGQLGHGKK 174
>gi|307167569|gb|EFN61119.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 1546
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 76/274 (27%), Positives = 114/274 (41%), Gaps = 26/274 (9%)
Query: 18 KETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITW 75
+E VY W ++ KS + P R+ G S K + CG +LA + GK+ W
Sbjct: 139 EEGEVYYWKFIN----YKSGVEESRPTRV-AGLSEKRIVDIACGSSHSLALTSDGKVYAW 193
Query: 76 GSADDEGQ--SYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
G ++ GQ + T+ +G P E +V+ A G + VT+ ++Y WG E
Sbjct: 194 GE-NNFGQVGNENTAIFNGSVPRQVKHELEKKNVIHIACGLTFNMVVTDENKLYGWGNNE 252
Query: 133 CVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
S +++ D S +F ST ++++ T S K S S
Sbjct: 253 ---SGQISSDNTSFSMTTFNGGSTDHRTSVFTHSLQNSPMFGSSSNSKNLFGCST--TSI 307
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG----- 245
N + + + KI KVA G HTL L++ +V+ WG GQLG
Sbjct: 308 NNVQSQKHYVYPREITYDMISSKIVKVACGYEHTLALTNNREVFAWGKNHIGQLGGNYNM 367
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
SR V TP + L+ AA G L V +GS
Sbjct: 368 QSSRPIKVNTPKMREVLDIAAHGN---LSVAEGS 398
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPHL 258
KI KV G HTL+L++ G V+ WG GQ+G+ K MV P +
Sbjct: 766 KIVKVVCGCMHTLVLTNKGNVYAWGNNCVGQVGVNKGRKPFGPIMVNVPQM 816
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-----VPTPHLIPCLEHAAS 267
+I K+ G +HTL+L+ G+++ WG GQ+G+ K+ V P + L+ AA
Sbjct: 1239 EIVKLVCGYQHTLVLTRNGKIYAWGNNNFGQVGVNKNRKLSSPTVVNVPEMGKVLDIAAY 1298
Query: 268 G 268
G
Sbjct: 1299 G 1299
Score = 37.7 bits (86), Expect = 7.5, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKA 109
K++ CG F +A ++ KL WG +D+GQ T + P + T +VK
Sbjct: 1186 KNIVHIACGEKFNMAVTDENKLYGWG-MNDKGQ-ISTVPLQEQYVHPHEITTFSDEIVKL 1243
Query: 110 AAGWAHCVSVTEAGEVYTWG 129
G+ H + +T G++Y WG
Sbjct: 1244 VCGYQHTLVLTRNGKIYAWG 1263
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
Length = 440
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 30/205 (14%)
Query: 64 LATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+A S+ GK+ TWG DD G+ + G+ P +P + ++V +AG +H ++++
Sbjct: 92 VALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSD 151
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA--LPTEQ------APPSDKRAG 173
G VY WG RD Q D K+ A L +E A +D A
Sbjct: 152 QGTVYAWG---------TYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAA 202
Query: 174 EEVVKRRKTSSAREESENPASGDEF----------FTLSPCLVTLNPGVKITKVAAGGRH 223
T E+ + + F + L P LV G+K V G
Sbjct: 203 LTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFA 262
Query: 224 TLILSDMG-QVWGWGYGGEGQLGLG 247
T +++ G V+ WG GQLG G
Sbjct: 263 TFVVAKTGSDVYAWGLNNYGQLGTG 287
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 50/263 (19%)
Query: 21 VVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLI 73
+VY WG GT+ ++ +P P + GG +K V G + A ++
Sbjct: 870 IVYSWGRNDHGQLGDGTTTDR---YNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVY 926
Query: 74 TWGS-ADDEGQS--YLTSGKHGETPEPFPLPTE----ASVVKAAAGWAHCVSVTEAGEVY 126
TWGS + +GQ+ Y T+ K+ P P P V+ + W+ +++ G VY
Sbjct: 927 TWGSESTGKGQTPAYSTTRKN---PTPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVY 983
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA---LPTEQAPPSDKRAGEEVVKRRKTS 183
TWG+ G G+ DST S LP++ S AG T
Sbjct: 984 TWGYNTN----------GQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTD 1033
Query: 184 --------SAREESENPASGDEFFTLSPCLVTLNP-----GVKITKVAAGGRHTLILSDM 230
+ + + ++ D++ P V NP +K T+++AG H+L++
Sbjct: 1034 GNTWTWGYNGYGQLGDGSTSDKY---KPQTVQ-NPTDTSQSLKATQISAGVDHSLVVDRD 1089
Query: 231 GQVWGWGYGGEGQLGLGSRIKMV 253
G +W WG+ GQLG+G+ +
Sbjct: 1090 GSLWAWGWNSNGQLGIGNTVNQT 1112
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 83/221 (37%), Gaps = 33/221 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV------VKAAAG 112
G G LA + G L +WGS +D GQ L G E EP P+ V V+A+AG
Sbjct: 242 GRGHILAVASDGNLYSWGS-NDHGQ--LGDGTTAERHEPVPVKKPQGVSQDFTWVQASAG 298
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ V + G++Y+WG +G G+ + + Q PS
Sbjct: 299 YLFSVGLGSDGKLYSWG----------DNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTW 348
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTL----------SPCLVTLNPGV----KITKVA 218
+E V + + GD +P V + GV +++
Sbjct: 349 KQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMS 408
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G H+L L ++GWG G++G GS TP I
Sbjct: 409 GWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRI 449
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 98/261 (37%), Gaps = 36/261 (13%)
Query: 32 SPEKSPIL-----SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYL 86
+P+K +L + P + G + V GG F++ + G WG+ + GQ
Sbjct: 769 NPDKGNVLGGQHVTITPPTINRGIRFDQVSAGGS-FSIGVASDGNAYAWGN-NKYGQLAQ 826
Query: 87 TSGK--HGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+TP PLP A + + AAG +H +++ G VY+WG + T
Sbjct: 827 KPADVSMQKTPVRIPLPDGADSSFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGT 886
Query: 141 RDFGSAGSFQKDSTGK-------QSALPTEQAPPSDKRA---GEEVVKRRKTSSAREESE 190
KD+ G+ + + A S+ R G E + +T + +
Sbjct: 887 TTDRYNPQPVKDTGGQPFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRK 946
Query: 191 NPASGDEFFTLSPCLVTLNPG--VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
NP +P NPG + +V+ + L G V+ WGY GQLG G+
Sbjct: 947 NP---------TPAADPDNPGQTLHAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGT 997
Query: 249 --RIKMVPTPHLIPCLEHAAS 267
P +P AS
Sbjct: 998 SDSTSYASNPARLPSQSFQAS 1018
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMV 253
G + T++P T+N G++ +V+AGG ++ ++ G + WG GQL + + M
Sbjct: 777 GGQHVTITPP--TINRGIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQ 834
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
TP IP + G D Q + AG S+V I G
Sbjct: 835 KTPVRIPLPD----GADSSFTYTQVA------AGDSHVLAIGSNG 869
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 49 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 105
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 106 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 162
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 163 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 210
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 211 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 269
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V ++ACG +H++
Sbjct: 270 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 316
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 146 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 205
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 206 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 265
Query: 304 VT 305
+T
Sbjct: 266 LT 267
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 92/259 (35%), Gaps = 86/259 (33%)
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ S + + PEP + + + G H V+V G V+TWG
Sbjct: 206 NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG--------- 256
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G + + S +PT+
Sbjct: 257 ----AGSEGQLGIGESKEISFMPTK----------------------------------- 277
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG+ + +P
Sbjct: 278 -------INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 330
Query: 259 IPCLE-----HAASGKDRPLLV------------RQGSVNSSGKAGRSYVKE-------- 293
+ LE A+G + R G + SG + + + +
Sbjct: 331 VKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 390
Query: 294 ------IACGGRHSAVVTD 306
I+CG H++V+T+
Sbjct: 391 TLNVVYISCGYEHTSVLTE 409
Score = 45.1 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 71/305 (23%), Positives = 116/305 (38%), Gaps = 87/305 (28%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L SP+ + PI A D+ G ++A G++ TWG A EGQ
Sbjct: 209 GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 264
Query: 86 LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWR-------- 131
+ GE+ E +PT+ + +++ + G H ++++E G+V++WG
Sbjct: 265 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 319
Query: 132 ---------------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E +P A+V G SF G + R+G+
Sbjct: 320 NNLCSQASPQKVKSLEGIPLAQVAA--GGTHSFALSLMGTSFGW-------GNNRSGQLA 370
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ +SA+E+ P S L TLN + ++ G HT +L++ GQV+ +
Sbjct: 371 L---SGNSAKEQIYKPHS-------IGALKTLN----VVYISCGYEHTSVLTEDGQVFTF 416
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G QL R SG+ P L+ G G +V +I C
Sbjct: 417 GGSSSEQLQHSPR-----------------SGRGGPQLIE-------GIGG--HVSQIEC 450
Query: 297 GGRHS 301
G H+
Sbjct: 451 GSYHT 455
>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
Length = 394
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 86/227 (37%), Gaps = 42/227 (18%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+P +PIP + D KDV G GC F++A + G + TWG D+ L +G +
Sbjct: 164 TPYKAPIPVQSL--DKVKDV-GAGCDFSVALRQDGTVWTWGKGDN---GRLGTGNNTTRE 217
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P +P A V A G H +++T G V WG G+ G DST
Sbjct: 218 TPQKVPDLADVESVAVGCEHVLALTADGVVKAWG-------------KGAEGQLGNDSTA 264
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSA--------------REESENPASGDEFFTL 201
S P D + V TS++ + G
Sbjct: 265 DSS-------RPVDVAHLDAVATVFATSASGFAVLDDGSVAGWGKNAERQLGDGTNANRT 317
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+P ++ GV+ +A G TL D G V GWG QLG GS
Sbjct: 318 TPVVLDHLKGVQ--SIAGGADFTLAALDDGSVIGWGANAAAQLGDGS 362
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 65/312 (20%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFINKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVT 140
+ PE ++V + G AH +++ + G+VY WG EC+ +V
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECI---RVP 128
Query: 141 RDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
R+ S Q + + G +L +A + + ++++
Sbjct: 129 RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQA--------- 179
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
SP L+ G+ ++AAGG H+ +L+ G ++GWG GQLGL P+L
Sbjct: 180 ---SPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNL 235
Query: 259 IPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR----------------------SY 290
+ L + G+D L ++G V + G G S
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 295
Query: 291 VKEIACGGRHSA 302
V +IACG +H++
Sbjct: 296 VTQIACGRQHTS 307
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 110/301 (36%), Gaps = 58/301 (19%)
Query: 21 VVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITW 75
VY WG + S + P P + G K + CG LA + G+++ W
Sbjct: 87 TVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIA---CGDSHCLAITTDGEVLGW 143
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G + GQ L + TP +V AAG H +VTE G++Y WGW
Sbjct: 144 GR-NQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGR--- 199
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----- 190
+G+ G ++ +P + A + + R T E
Sbjct: 200 -------YGNLGLGDRE----DRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFG 248
Query: 191 -----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
GD L P V KI + G RHT L G+++GWG+ GQ+G
Sbjct: 249 WSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVG 308
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G+ + +P L+ L+ D+ + V Q CG RH+ +T
Sbjct: 309 CGN-TEDQSSPQLVKGLQ------DQVVTVVQ------------------CGWRHTLAMT 343
Query: 306 D 306
D
Sbjct: 344 D 344
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 91/246 (36%), Gaps = 44/246 (17%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE-VY 126
SG L+ +WG +D GQ + P + + G H +++ + + VY
Sbjct: 31 SGDLVCSWGRGED-GQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVY 89
Query: 127 TWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+WGW DFG G F L +Q D
Sbjct: 90 SWGWG----------DFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGE 139
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
R ++ G L+P +T GV + +AAG HT +++ G+++GWG+G
Sbjct: 140 VLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGR 199
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRH 300
G LGLG R L+P A +G+ +K +ACG RH
Sbjct: 200 YGNLGLGDR-----EDRLVPDQVAAVAGE--------------------LMKMVACGWRH 234
Query: 301 SAVVTD 306
+ V +
Sbjct: 235 TICVAE 240
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 76/208 (36%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E+GKL WG G L + P+ + A GW H + V E+G
Sbjct: 185 AVTENGKLYGWGWGR-YGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGN 243
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G +P + K+ R T +
Sbjct: 244 MYTFGWSK----------YGQLGH----GDFADHLIPHQVQALKSKKIQAITGGWRHTFA 289
Query: 185 AREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ G F SP LV +T V G RHTL ++D G V+
Sbjct: 290 LDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVY 349
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG G + TP I L
Sbjct: 350 SWGRGTSGQLGHGDTVDR-STPKRIEIL 376
>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 566
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 118/309 (38%), Gaps = 34/309 (11%)
Query: 21 VVYMWGY---LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITW 75
V+Y WG G E+ + P+ GG K V CG+A A +++G++ TW
Sbjct: 198 VLYTWGAGQGRLGHDHERDRFI-PLEVSALGG---KKVVQAACGYAHTAAITDAGRVYTW 253
Query: 76 GSADDEGQSYLTSGKHGE-----TP-EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G +G+ + HG+ TP E L + VV V +G VY WG
Sbjct: 254 G----QGKGGVLG--HGDESACSTPREVASLALQVIVVVIVVVVVAAVVAGGSGTVYAWG 307
Query: 130 WRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
E + T A S + + + P +R + R +
Sbjct: 308 GNEKGQLGFGDRTPRMSPALLADLSSISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDG 367
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
S G E L P V V I VAAG HT L+ G+VW WG G +GQLG G
Sbjct: 368 ASGQLGHGTEEEELVPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHG 427
Query: 248 SRIKMVPTPHLIPCLEHA----ASGKDRPLLVRQGSVNSSGKAGRSY-------VKEIAC 296
+ I P LI L+ + A G R + G R+ VK +AC
Sbjct: 428 AAILRYCKPLLIESLKDSGHLYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVAC 487
Query: 297 GGRHSAVVT 305
G RH A +
Sbjct: 488 GKRHCAALV 496
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 28/202 (13%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETP-EPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A +ESGKL WG G L P E +P E + A GW H ++V +G
Sbjct: 185 AVTESGKLYGWGWGR-YGNLGLGDRNDRLVPGEVAAVPGEKMNL-VACGWRHTIAVANSG 242
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+YT+GW + +G G + +P + +K R T
Sbjct: 243 NLYTFGWSK----------YGQLGHGDFE----DHLVPHQVQALKNKTIQAVSGGWRHTV 288
Query: 184 SAREESENPASG-DEFFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+ E+ E G ++F + SP L+T K+T+V G RHT+ ++D G V
Sbjct: 289 ALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNV 348
Query: 234 WGWGYGGEGQLGLGSRI-KMVP 254
+ WG G GQLG G + + VP
Sbjct: 349 YSWGRGTSGQLGHGDAVDRCVP 370
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 94/253 (37%), Gaps = 50/253 (19%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + G++ +WG + GQ L + P +V AAG H +VTE+G
Sbjct: 132 LAITGDGEVHSWGR-NQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESG 190
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
++Y WGW +G+ G ++ +P E A ++ R T
Sbjct: 191 KLYGWGWGR----------YGNLGLGDRN----DRLVPGEVAAVPGEKMNLVACGWRHTI 236
Query: 184 SAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+ GD L P V I V+ G RHT+ L + G++
Sbjct: 237 AVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGEL 296
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+GWG+ GQ+G G+ +P LI G VN V
Sbjct: 297 YGWGWNKFGQVGCGNTDDH-NSPKLIT-----------------GIVNEK-------VTR 331
Query: 294 IACGGRHSAVVTD 306
+ CG RH+ +TD
Sbjct: 332 VTCGWRHTVAITD 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 76/195 (38%), Gaps = 20/195 (10%)
Query: 69 SGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE-VY 126
SG L+ +WG +D GQ + P + + G H + +E+ VY
Sbjct: 31 SGDLVCSWGRGED-GQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVY 89
Query: 127 TWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+WGW DFG G F + L +Q D
Sbjct: 90 SWGWG----------DFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGE 139
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
S R ++ G L P V G+ + +AAG HT +++ G+++GWG+G
Sbjct: 140 VHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGR 199
Query: 241 EGQLGLGSRI-KMVP 254
G LGLG R ++VP
Sbjct: 200 YGNLGLGDRNDRLVP 214
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A E G+L WG + GQ + +P+ V + GW H V
Sbjct: 282 GGWRHTVALDEDGELYGWG-WNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTV 340
Query: 118 SVTEAGEVYTWG 129
++T+ G VY+WG
Sbjct: 341 AITDRGNVYSWG 352
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 94/234 (40%), Gaps = 35/234 (14%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH 91
E++ ILSP + +S ++ CG LA +E G+L GS +D GQ G
Sbjct: 37 EENYILSP--EEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS-NDFGQL----GHD 89
Query: 92 GETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWGWREC-----------VPSAK 138
G + +P S+V A G AH +++ E G++YTWG C K
Sbjct: 90 GCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLETDEGIQYKPK 149
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
+ + S Q S G + + E + S+
Sbjct: 150 IVKTLASMLLVQI-SCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSK-------- 200
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
P LV G+ I+ +A GG H+ ++S G V+GWG GQLG+ S+ +
Sbjct: 201 ----PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL 250
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 52/237 (21%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVV 107
K + CG +LA S+ G+L WG + GQ L G+ TP+ + +V
Sbjct: 377 KSIIQITCGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRLFTSIPTPQLVEHLSGVPLV 433
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR-------------------ECVPSAKVTRDFGSAGS 148
+ +AG AH ++++ +G +Y+WG E + + KV +F + G
Sbjct: 434 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKV--EFLACG- 490
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G +AL T+ AG + ++N L P LVT
Sbjct: 491 ------GSHTALLTKDGLVFTFGAG------KYGQLGHNSTQN--------ELRPRLVTE 530
Query: 209 NPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHLIPCLE 263
G ++T+VA G HTL +SD+G+V+ +G G EGQLG G+ +++P P +P E
Sbjct: 531 LAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNE 587
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I ++ G H+L LS G+++ WG GQLG+G +PTP L +P ++ +A
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438
Query: 268 GKDRPLLVRQGSV-----NSSGKAGRSY-----------------VKEIACGGRHSAVVT 305
L G++ N G+ G + V+ +ACGG H+A++T
Sbjct: 439 KAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLT 498
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 34/228 (14%)
Query: 34 EKSPILSP--IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
E+ IL+P IP + DS + G L + SGK+ GS D Y G
Sbjct: 20 EEEQILTPSRIPWK---PDSAVNQIACGHRHTLFLTASGKVYACGSND-----YSQLGHE 71
Query: 92 GETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWREC-----------VPSAK 138
T P +P + + + A G H ++++E G+V++WG EC V K
Sbjct: 72 LPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPK 131
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
+ R+ S Q S T G + + SS + ++
Sbjct: 132 IVRNLVSKTVVQIACGSNHSLALT--CCGELYSWGSNLYGQLGVSSPNDLQQSN------ 183
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
+P +T G+ ++ +A GG H+ ++S V+GWG GQLGL
Sbjct: 184 ---TPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 24/111 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G E T P + IT++A G RH++ LS+ GQV+ WG GQLG S +V
Sbjct: 69 GHELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQDIVK 128
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P ++ R L+ + V +IACG HS +T
Sbjct: 129 LPKIV-----------RNLVSKT-------------VVQIACGSNHSLALT 155
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 105/282 (37%), Gaps = 76/282 (26%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG---KHGETPEPFPLPTEASVVKAAAGWAH 115
G +LA + G+L +WGS + GQ ++S + TP V A G H
Sbjct: 147 GSNHSLALTCCGELYSWGS-NLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNH 205
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++++ V+ WG C G G D T + A PT+
Sbjct: 206 SFLISKSSAVFGWGRNNC----------GQLG--LNDETNR--AYPTQ------------ 239
Query: 176 VVKRRKTSSAREESENPASGDEF----------FT-----------------LSPCLVTL 208
+K +T R A GDEF FT + P +V
Sbjct: 240 -LKTLRTLGVR----FVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMVME 294
Query: 209 NPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
G I++VA G RHTL L G+++G+G G GQLG K + P L+
Sbjct: 295 LMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGT-RNTKSLNLPQLVI------- 346
Query: 268 GKDRPLLVRQGS--VNSSGKAGRSYVKEIACGGRHSAVVTDM 307
P + GS + S+ S + +I GG S V T M
Sbjct: 347 ---GPWVSPSGSTLLQSNDAKIASVIHQIFSGGDQSIVTTSM 385
Score = 40.8 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 29/107 (27%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L+P + P + ++A G RHTL L+ G+V+ G QLG H +P
Sbjct: 25 LTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSNDYSQLG-----------HELP 73
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYV-KEIACGGRHSAVVTD 306
RPL + + + YV +IACG RHS +++
Sbjct: 74 --------TKRPLQIPE---------LQDYVITQIACGSRHSMALSE 103
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 92/259 (35%), Gaps = 86/259 (33%)
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ S + + PEP + + + G H V+V G V+TWG
Sbjct: 206 NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG--------- 256
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G + + S +PT+
Sbjct: 257 ----AGSEGQLGIGESKEISFMPTK----------------------------------- 277
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG+ + +P
Sbjct: 278 -------INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 330
Query: 259 IPCLE-----HAASGKDRPLLV------------RQGSVNSSGKAGRSYVKE-------- 293
+ LE A+G + R G + SG + + + +
Sbjct: 331 VKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 390
Query: 294 ------IACGGRHSAVVTD 306
I+CG H++V+T+
Sbjct: 391 TLNVVYISCGYEHTSVLTE 409
Score = 44.7 bits (104), Expect = 0.049, Method: Composition-based stats.
Identities = 71/305 (23%), Positives = 116/305 (38%), Gaps = 87/305 (28%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L SP+ + PI A D+ G ++A G++ TWG A EGQ
Sbjct: 209 GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 264
Query: 86 LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWR-------- 131
+ GE+ E +PT+ + +++ + G H ++++E G+V++WG
Sbjct: 265 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 319
Query: 132 ---------------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E +P A+V G SF G + R+G+
Sbjct: 320 NNLCSQASPQKVKSLEGIPLAQVAA--GGTHSFALSLMGTSFGW-------GNNRSGQLA 370
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ +SA+E+ P S L TLN + ++ G HT +L++ GQV+ +
Sbjct: 371 L---SGNSAKEQIYKPHS-------IGALKTLN----VVYISCGYEHTSVLTEDGQVFTF 416
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G QL R SG+ P L+ G G +V +I C
Sbjct: 417 GGSSSEQLQHSPR-----------------SGRGGPQLIE-------GIGG--HVSQIEC 450
Query: 297 GGRHS 301
G H+
Sbjct: 451 GSYHT 455
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 115/290 (39%), Gaps = 49/290 (16%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
PG +PE+ P L+ + A G D F LA E G + WGS G L
Sbjct: 198 PGLTPEQVPGLNGVVALAAGFD-----------FTLAVLEDGTVRAWGS---NGSGQLGD 243
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
G + P + + + + AG H +++ + G V+TWG +A
Sbjct: 244 GTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWG--------------SNASG 289
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE-----------SENPASGDE 197
D T A+P + P +R + V S A + S GD
Sbjct: 290 QLGDGTWNDRAVPMQ--VPGLERV-KAVASMDSDSLALLDTGAVFAWGANGSGQLGDGDT 346
Query: 198 FFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIKMVPT 255
+P V PG+ + V G +H L+L G +W WG G GQLG GS +VP
Sbjct: 347 TDRATPGPV---PGLNAVASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPA 403
Query: 256 PHL-IPCLEHAASGKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
P + + + A+G L + GSV + G+ + + + RH+AV
Sbjct: 404 PVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAV 453
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 79/200 (39%), Gaps = 16/200 (8%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G + WG + GQ L G + P +P SV AAG +H +++
Sbjct: 471 SLAVGMDGTVWAWGR-NAAGQ--LGDGTTLDRARPVAVPGLTSVTAVAAGGSHVLALRSD 527
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V+ WG+ G + + + + S L A + +
Sbjct: 528 GSVWAWGYNAL-------GQLGDGTTVDRLTPVRVSGLGAVVAVAAGSYFSMALQSDGTV 580
Query: 183 SSAREESENP-ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
+ E E G LSP V + IT+VAAG H L + G VW WG GE
Sbjct: 581 WTWGEGFEGQLGDGGGVQRLSP--VRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGE 638
Query: 242 GQLGLGS---RIKMVPTPHL 258
GQLG GS R + V P L
Sbjct: 639 GQLGDGSWADRFRPVQVPGL 658
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 91/237 (38%), Gaps = 50/237 (21%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA ++G + WG+ G L G + P P+P +V G H + + +
Sbjct: 321 SLALLDTGAVFAWGA---NGSGQLGDGDTTDRATPGPVPGLNAVASVVGGAQHALVLRKD 377
Query: 123 GEVYTWGW------------RECVPSAKVTRDFG----SAGSFQKDST---------GKQ 157
G ++ WG R VP A V R G + GSF + G+
Sbjct: 378 GTLWAWGGGLSGQLGHGGSERHVVP-APVMRLAGVTSMATGSFHSLAALGDGSVWAWGRN 436
Query: 158 SALPTEQAPPSDKRAG---EEVVKRRKTSSAREES-------------ENPAS--GDEFF 199
+ +++ A E + R +SA S N A GD
Sbjct: 437 TYGQLGDGSTAERHAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGT- 495
Query: 200 TLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
TL PG+ +T VAAGG H L L G VW WGY GQLG G+ + ++ P
Sbjct: 496 TLDRARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTP 552
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 83/214 (38%), Gaps = 28/214 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G + WG+ G L G P + VV +G H ++
Sbjct: 1173 GAWHSLALLSDGTVWAWGA---NGFGQLGDGTSTPRTRPVQVAGLGDVVAIGSGGYHALA 1229
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEE- 175
V G V+TWG+ FG G D T + +LPT E AG +
Sbjct: 1230 VCSDGSVWTWGYNA----------FGQLG----DGTAESRSLPTRVEGLEGVVAVAGGDH 1275
Query: 176 ---VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ T SA + + GD T V + + V AG HT+ L G
Sbjct: 1276 YSLALHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGT 1335
Query: 233 VWGWGYGGEGQLG---LGSRIKMVPTPHLIPCLE 263
VW WG GQLG G+R+++VP P +P L
Sbjct: 1336 VWTWGDNAFGQLGDGASGTRMRLVPRP--VPNLS 1367
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 101/245 (41%), Gaps = 30/245 (12%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P R+ G DS V G +LA E G + WG+ + GQ + G TPE +P
Sbjct: 152 PMRVAGLDSVVAVAAGDF-HSLALREDGTVWAWGT-NFHGQLGRGHTQPGLTPEQ--VPG 207
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-KDSTGKQSALP 161
VV AAG+ ++V E G V WG S GS Q D T Q P
Sbjct: 208 LNGVVALAAGFDFTLAVLEDGTVRAWG---------------SNGSGQLGDGTSTQRLSP 252
Query: 162 ---TEQAPPSDKRAGE-EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN-PGV-KIT 215
+E + ++ RAG + K N + T + V + PG+ ++
Sbjct: 253 VKVSELSGITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVK 312
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS---GKDRP 272
VA+ +L L D G V+ WG G GQLG G TP +P L AS G
Sbjct: 313 AVASMDSDSLALLDTGAVFAWGANGSGQLGDGDTTDRA-TPGPVPGLNAVASVVGGAQHA 371
Query: 273 LLVRQ 277
L++R+
Sbjct: 372 LVLRK 376
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 100/258 (38%), Gaps = 24/258 (9%)
Query: 11 NEKMEECKETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
+ + + V+ WG G + + + P + G S V GG LA
Sbjct: 469 HHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTSVTAVAAGGS-HVLALRSD 527
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + WG + GQ L G + P + +VV AAG +++ G V+TWG
Sbjct: 528 GSVWAWGY-NALGQ--LGDGTTVDRLTPVRVSGLGAVVAVAAGSYFSMALQSDGTVWTWG 584
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALP--TEQAPPSDKRAGEEVVKRRKTSSARE 187
G G Q+ S + L T A S A V+ T A
Sbjct: 585 -------EGFEGQLGDGGGVQRLSPVRVEGLANITRVAAGS---AHALAVRGDGTVWAWG 634
Query: 188 ESENPASGDEFFT--LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
++ GD + P V PG++ IT V+ G H++ L G V WGY G GQL
Sbjct: 635 DNGEGQLGDGSWADRFRPVQV---PGLQGITAVSGGRSHSMALQGDGTVRAWGYNGYGQL 691
Query: 245 GLGSRIKMVPTPHLIPCL 262
G G+ V P LIP L
Sbjct: 692 GDGTLTSRV-RPALIPGL 708
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSD 229
RA +V+ T A E+ + GD T V++ PGV + VA+G +H+L L+
Sbjct: 768 RAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSV-PGVPCVRSVASGIQHSLALAC 826
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV----- 280
G VW WG GQLG G+ V TP L+ L A+G D + +R GSV
Sbjct: 827 DGTVWAWGANARGQLGDGTTTPRV-TPGLVEGLRGVVALAAGGDASVALRADGSVWSWGG 885
Query: 281 NSSGKAGRSYVKEIAC 296
N+SG+ G + + A
Sbjct: 886 NASGQLGDGTLTDRAL 901
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 98/267 (36%), Gaps = 58/267 (21%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
GT+P +P+ R+ G + V G F++A + G WG+ + GQ L G
Sbjct: 945 GTAPSLTPV------RVKGLERVASVAAGRA-FSVAVRDDGTAWAWGT-NPSGQ--LGDG 994
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG-----------------WRE 132
+ P + + + +AG H V+++ G V+TWG W
Sbjct: 995 TNHARSVPNQVTSLKGIRAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPR 1054
Query: 133 CVPSAK-------------------VTRDFGSA--GSFQKDSTGKQSA-------LPTEQ 164
VP + R +GS G TG Q P +
Sbjct: 1055 QVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIR 1114
Query: 165 APPSDKRA-GEEVVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGG 221
P RA G+ V + + + +N GD T +T+ + V++G
Sbjct: 1115 PPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGA 1174
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGS 248
H+L L G VW WG G GQLG G+
Sbjct: 1175 WHSLALLSDGTVWAWGANGFGQLGDGT 1201
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 73/211 (34%), Gaps = 16/211 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G L G ++ WG + G L G P +P V A+G H ++
Sbjct: 767 GRAHTLMVRADGTVMAWG---ENGSGQLGDGTSTHRTGPVSVPGVPCVRSVASGIQHSLA 823
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G V+ WG A G + + + G L A + G+ V
Sbjct: 824 LACDGTVWAWG-------ANARGQLGDGTTTPRVTPGLVEGLRGVVALAA---GGDASVA 873
Query: 179 RRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
R S N + GD T + VA G H L + + G +W W
Sbjct: 874 LRADGSVWSWGGNASGQLGDGTLTDRALPAHVEHLSNAVAVAVGETHALAVGEDGALWAW 933
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
G G GQLG G + TP + LE AS
Sbjct: 934 GANGSGQLGDGGTAPSL-TPVRVKGLERVAS 963
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
++ V AG RHT ++ G VW WG GQLGLG
Sbjct: 1368 SVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTN 1406
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 70/295 (23%), Positives = 112/295 (37%), Gaps = 78/295 (26%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ---APPSDKRAG 173
+++ + G+VY WG DS G+ L +E+ P + K
Sbjct: 97 LALNDKGQVYAWGL---------------------DSDGQLGLLGSEECIRVPRNIKSLS 135
Query: 174 EEVVKRRKTSSAREESENPASGDEFF------------------TLSPCLVTLNPGVKIT 215
+ ++ + + S + EFF SP L+ G+
Sbjct: 136 D--IQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFM 193
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKD 270
+VAAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGED 252
Query: 271 R-PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 107/279 (38%), Gaps = 46/279 (16%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G+L TWG + K +P P S+V+AA G HC++V +
Sbjct: 56 SLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK 115
Query: 123 GEVYTWG---WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR----AGEE 175
G Y WG + +C A+ D A ++D +P AP R G
Sbjct: 116 GRAYAWGGNEYGQCGEEAERKEDGTRA--LRRDIP-----IPQRCAPKLKVRQVAAGGTH 168
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
V + + GD +P V VK+ +A G H L L++ G +W
Sbjct: 169 SVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKV--IAVGAFHNLALTEDGILWA 226
Query: 236 WGYGGEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGK----- 285
WG GQLG G R + + L + ++ AA G L ++G V + G+
Sbjct: 227 WGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGR 286
Query: 286 -------------------AGRSYVKEIACGGRHSAVVT 305
AG + +++CGG HS +T
Sbjct: 287 LGFGDDKSSHMVPQKVELLAGEDII-QVSCGGTHSVALT 324
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 123/349 (35%), Gaps = 82/349 (23%)
Query: 17 CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
C + ++ WG+ G PE SP P G S GG LA + G+
Sbjct: 60 CADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGW-HCLAVDDKGRA 118
Query: 73 ITWGSADDEGQSYLTSGKHGETPEP--------FPLPTEAS----VVKAAAGWAHCVSVT 120
WG G Y G+ E E P+P + V + AAG H V +T
Sbjct: 119 YAWG-----GNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLT 173
Query: 121 EAGEVYTWGWRECVPSAKVTR-------------DFGSAGSFQKDSTGKQSAL------- 160
+ G V W W + P + + + G+F + + L
Sbjct: 174 QDGHV--WTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNE 231
Query: 161 --------------PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG----------- 195
P SD + +++ +E E A G
Sbjct: 232 YGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGD 291
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G + V T
Sbjct: 292 DKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG---RKVTT 348
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
H + + P+ + + G+ + +ACGGRH+ +
Sbjct: 349 GHPM----------EVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAI 387
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 71/294 (24%), Positives = 116/294 (39%), Gaps = 76/294 (25%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPP-----SDK--RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+A +K + G + +++TS P L+ G+ +
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTS-------------------PQLIKSLLGIPFMQ 194
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
VAAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDH 253
Query: 272 -PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 79/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A E G L WG G L PE +V A GW H V+V+ +G+
Sbjct: 192 AILEDGDLYGWGWGQ-YGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGD 250
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D+ + R T +
Sbjct: 251 LYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDRFISQIAGGWRHTMA 296
Query: 185 AREESENPASG----------DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G D SP V K+ +VA G RHTL L++ V+
Sbjct: 297 VAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVF 356
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG G I TP +I L
Sbjct: 357 SWGRGTSGQLGHGEIIDR-NTPKMIDAL 383
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 26/208 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
G ++A S + +WG +D GQ L G + P P F +P ASVV A
Sbjct: 28 GANHSVALLSSKAVCSWGRGED-GQ--LGHGDAEDRPVPTLLSGFDVPGIASVVICGADH 84
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPP 167
S E ++Y+WGW DFG G F + +Q
Sbjct: 85 TTAYS-DEQMQLYSWGWG----------DFGRLGHGNSSDVFHPQPIEALQGIKIKQIAC 133
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
D + S R ++ G+ +L P + GV + +AAG HT +
Sbjct: 134 GDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAI 193
Query: 228 SDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
+ G ++GWG+G G LGLG R ++VP
Sbjct: 194 LEDGDLYGWGWGQYGNLGLGDRNDRLVP 221
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 113/283 (39%), Gaps = 65/283 (22%)
Query: 41 PIPARLCGGD----SWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
P+P L G D + +CG A + E +L +WG D HG + +
Sbjct: 61 PVPTLLSGFDVPGIASVVICGADHTTAY-SDEQMQLYSWGWGD------FGRLGHGNSSD 113
Query: 97 PF-PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
F P P EA + + A G +HC++VT+AG+V++WG + G + +
Sbjct: 114 VFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ-------NGQLGLGNT--E 164
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTL 201
DS Q E AG E T++ E+ + N GD L
Sbjct: 165 DSLLPQKIHAFEGVCVKMIAAGAE-----HTAAILEDGDLYGWGWGQYGNLGLGDRNDRL 219
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
P V+ G K+ VA G RHT+ +S G ++ +G+ GQLG G HL+P
Sbjct: 220 VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDF-----EDHLVPH 274
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
A KDR ++ +IA G RH+ V
Sbjct: 275 KLEAL--KDR------------------FISQIAGGWRHTMAV 297
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + +P P E V + A GW H +
Sbjct: 289 GGWRHTMAVAGDGKLYGWG-WNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTL 347
Query: 118 SVTEAGEVYTWG 129
++TE V++WG
Sbjct: 348 ALTENKNVFSWG 359
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 116/300 (38%), Gaps = 56/300 (18%)
Query: 58 GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPL---PTEASVVKAAAG 112
GGC A T++ G L WG G H P PL + SVVK + G
Sbjct: 115 GGCHSAAVTND-GTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCG 173
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G VY WG + + G ++ KD T L + +
Sbjct: 174 GTHTAALTNLGRVYVWGRGD-------SGQLGIGSAWLKD-TDDNGLLGVSRPHLVEGFN 225
Query: 173 GEEVVK----RRKTSSAREESENPASGDEFFTL----------SPCLVTLNPGVKITKVA 218
GE+VV+ +++ E+ G E + + +P V + +V+
Sbjct: 226 GEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVS 285
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL 273
GG HT++++ G + +G G G+LGLG K PHL+ L+ AA G L
Sbjct: 286 CGGWHTMVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVKALKGQTVIQAACGGSHTL 344
Query: 274 LV---------------RQG-------SVNSSGKAGRSYVKEIACGGRHSAVVTDMSYPI 311
V R G SV + G V++++ GG HS +T S PI
Sbjct: 345 FVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGAHSMALTHSSRPI 404
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 88/213 (41%), Gaps = 29/213 (13%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V + G H +++T +G VY+WGW D S QK + +Q L +
Sbjct: 55 IVAVSCGSRHTMALTASGAVYSWGWGSMGQLGH--GDLKSINVPQKIAFFEQEGLKVDYV 112
Query: 166 PPSDKRAGEEVVKRRKTSSAREES---------ENPASGDEFFTLSPCLVTLNPGVKITK 216
S V T E+ E A+ + F P L + + K
Sbjct: 113 --SCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVAD-ESVVK 169
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
V+ GG HT L+++G+V+ WG G GQLG+GS L ++ G RP LV
Sbjct: 170 VSCGGTHTAALTNLGRVYVWGRGDSGQLGIGS-------AWLKDTDDNGLLGVSRPHLVE 222
Query: 277 QGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSY 309
G G V ++ACG HSA VT+ +
Sbjct: 223 -------GFNGEKVV-QVACGAFHSAAVTEQGH 247
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 23/96 (23%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G +I V+ G RHT+ L+ G V+ WG+G GQLG G +K + P I E D
Sbjct: 52 GEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGD-LKSINVPQKIAFFEQEGLKVD 110
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
++CGG HSA VT+
Sbjct: 111 Y----------------------VSCGGCHSAAVTN 124
>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
Length = 957
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 52/217 (23%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
A + SG+L WG + GQ L G+ TP+ + + +AG AH ++++
Sbjct: 85 ARTPSGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSM 141
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST--------------------GKQSALP 161
+G +Y+WG E FG G +S G SAL
Sbjct: 142 SGNIYSWGKNE----------FGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALL 191
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
T+ AG K + ++E L PCLV ++T++A G
Sbjct: 192 TQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVEYRVTQIACGR 237
Query: 222 RHTLI-LSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 238 WHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 274
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 112 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 159
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ +G N V+ +ACGG HSA++T
Sbjct: 160 ----HTES-KDYPSLI-EGLDNQK-------VEFVACGGSHSALLT 192
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 97/240 (40%), Gaps = 59/240 (24%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--K 151
++V + G AH +++ + G+VY WG EC+ +V R+ S Q +
Sbjct: 34 NIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECI---RVPRNIKSLSDIQIVQ 90
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-LSPCLVTLNP 210
S G +L + G EV S + + G EF SP L+
Sbjct: 91 VSCGYYHSLALSK--------GSEVF-----SWGQNKYGQLGLGFEFKKQTSPQLIKSLL 137
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HA 265
G+ ++AAGG H+ +L+ G ++GWG GQLGL P+L+ L +
Sbjct: 138 GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYI 196
Query: 266 ASGKDR-PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G+D L ++G V + G G S V ++ACG +H++
Sbjct: 197 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 256
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +V+ G H+L LS +V+ WG GQLGLG K +P L IP ++ A
Sbjct: 86 IQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIA 145
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 146 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 205
Query: 304 VT 305
+T
Sbjct: 206 LT 207
Score = 44.7 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L + G
Sbjct: 35 IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCG 94
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G + +IA GG HS V+
Sbjct: 95 YYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVL 154
Query: 305 T 305
T
Sbjct: 155 T 155
>gi|301106665|ref|XP_002902415.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098289|gb|EEY56341.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 808
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 32/239 (13%)
Query: 63 ALATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEAS---VVKAAAGWAHCV 117
+LA +E G++ WG EGQ L +G +P + + V K + G +H +
Sbjct: 47 SLALNEFGQVFAWGRGR-EGQLGLGNVAGVASAVSQPRRIGGALAGQLVTKISCGESHSL 105
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQAPPSDK------ 170
++T +G+V+ WG +P AKV D + D + A L +E+ + +
Sbjct: 106 ALTVSGDVFMWG---LLPVAKVLYDENGEATDASDRAAVELAGLSSEEMREAQRARSRGD 162
Query: 171 --RAGEEVVKRRKTSSAREESENP--ASGDEF---FTLSPCLV-TLNPG----VKITKVA 218
R ++ + R + + E+ +G+ +PC+ L G + +T +A
Sbjct: 163 LRRHMDDTIMARLVRDSMQVYEDAGVVNGENVKVQTVRAPCMTPRLATGPLARLVVTNIA 222
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC----LEHAASGKDRPL 273
AG H+L ++ G V+ GY GQLGLGSR + +EH A G+ L
Sbjct: 223 AGFAHSLATTNEGAVYSCGYNDNGQLGLGSRRNSAEFQRIRALESYFIEHIACGQQHSL 281
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
I +AG RH+L L++ GQV+ WG G EGQLGLG+
Sbjct: 37 IVGFSAGERHSLALNEFGQVFAWGRGREGQLGLGN 71
>gi|21554872|gb|AAM63715.1| unknown [Arabidopsis thaliana]
Length = 553
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 76/188 (40%), Gaps = 63/188 (33%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
++ AAG AH +++T G VY+WG G F + TGK+S
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWG----------------RGMFGRLGTGKES------- 54
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+E+V R E N A G+ ++I VAAG H+L
Sbjct: 55 --------DELVP------VRVEFPNQAEGER--------------IRIIGVAAGAYHSL 86
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLVRQGSVNSSG 284
+SD G VW WGY GQLG + P L+ L E AS S+N SG
Sbjct: 87 AVSDDGSVWCWGYNIYGQLGFDGENSLAPC--LVKNLFEQEAS---------SSSLNDSG 135
Query: 285 KAGRSYVK 292
+ RS +K
Sbjct: 136 REARSDLK 143
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 25/221 (11%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P + G + + GG G +LA + +G ++ WG ++EGQ + + TP L
Sbjct: 182 PVPVNVPAGTTITAIAGG-RGHSLALTSTGTVLAWGK-NNEGQLGDGTNANSTTPVDVDL 239
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P +V A G ++ ++T AG V WG S+G +T +S
Sbjct: 240 PPGTTVTAIAGGGSNSFALTSAGTVLAWG-------------LNSSGQVGDGTTTDRSTP 286
Query: 161 PTEQAPPSDKR---AGEEVVKRRKTSSAR------EESENPASGDEFFTLSPCLVTLNPG 211
PP AG E TS+ S G + +P V L P
Sbjct: 287 VDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVNLPPD 346
Query: 212 VKITKVAA-GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
IT + A G H+L L+ G + WG G+LG G+
Sbjct: 347 TTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTTTN 387
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 91/265 (34%), Gaps = 70/265 (26%)
Query: 40 SPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
+P+ L G + + G FAL + +G ++ WG+ + G+ + TP
Sbjct: 77 TPVDVDLPAGTTITAIAGSDANSFAL--TSTGAVLAWGN-NTGGELGDGTNTDRTTPVAV 133
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
LPT +V A G H +++T G + WG FG G
Sbjct: 134 KLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNG----------FGELG----------- 172
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
T++AR E P V + G IT +A
Sbjct: 173 ---------------------DGTTTARNE--------------PVPVNVPAGTTITAIA 197
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-----VPTPHLIPCLEHAASGKDRPL 273
G H+L L+ G V WG EGQLG G+ V P A G +
Sbjct: 198 GGRGHSLALTSTGTVLAWGKNNEGQLGDGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFA 257
Query: 274 LVRQGSV-----NSSGKAGRSYVKE 293
L G+V NSSG+ G +
Sbjct: 258 LTSAGTVLAWGLNSSGQVGDGTTTD 282
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 40 SPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
+P+ L G + + GGG FAL + +G ++ WG + GQ + TP
Sbjct: 233 TPVDVDLPPGTTVTAIAGGGSNSFAL--TSAGTVLAWG-LNSSGQVGDGTTTDRSTPVDV 289
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
LP +V A G H V++T AG V WG
Sbjct: 290 DLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNS 323
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 92/259 (35%), Gaps = 86/259 (33%)
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ S + + PEP + + + G H V+V G V+TWG
Sbjct: 55 NSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG--------- 105
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G + + S +PT+
Sbjct: 106 ----AGSEGQLGIGESKEISFMPTK----------------------------------- 126
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG+ + +P
Sbjct: 127 -------INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 179
Query: 259 IPCLE-----HAASGKDRPLLV------------RQGSVNSSGKAGRSYVKE-------- 293
+ LE A+G + R G + SG + + + +
Sbjct: 180 VKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 239
Query: 294 ------IACGGRHSAVVTD 306
I+CG H++V+T+
Sbjct: 240 TLNVVYISCGYEHTSVLTE 258
Score = 44.7 bits (104), Expect = 0.056, Method: Composition-based stats.
Identities = 71/305 (23%), Positives = 116/305 (38%), Gaps = 87/305 (28%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L SP+ + PI A D+ G ++A G++ TWG A EGQ
Sbjct: 58 GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 113
Query: 86 LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWR-------- 131
+ GE+ E +PT+ + +++ + G H ++++E G+V++WG
Sbjct: 114 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 168
Query: 132 ---------------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E +P A+V G SF G + R+G+
Sbjct: 169 NNLCSQASPQKVKSLEGIPLAQVAA--GGTHSFALSLMGTSFGW-------GNNRSGQLA 219
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ +SA+E+ P S L TLN + ++ G HT +L++ GQV+ +
Sbjct: 220 L---SGNSAKEQIYKPHS-------IGALKTLN----VVYISCGYEHTSVLTEDGQVFTF 265
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G QL R SG+ P L+ G G +V +I C
Sbjct: 266 GGSSSEQLQHSPR-----------------SGRGGPQLIE-------GIGG--HVSQIEC 299
Query: 297 GGRHS 301
G H+
Sbjct: 300 GSYHT 304
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 71/294 (24%), Positives = 116/294 (39%), Gaps = 76/294 (25%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPP-----SDK--RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+A +K + G + +++TS P L+ G+ +
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTS-------------------PQLIKSLLGIPFMQ 194
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
VAAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDH 253
Query: 272 -PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|348506010|ref|XP_003440553.1| PREDICTED: RCC1 domain-containing protein 1-like [Oreochromis
niloticus]
Length = 396
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 34/195 (17%)
Query: 59 GCGFALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G A+ + +G + +WG S G LTS E P S+ + A G H
Sbjct: 175 GAEHAVLLTATGAVYSWGLGSHGQLGHGVLTSE---EEPRVVEALWGMSMTRVATGGWHS 231
Query: 117 VSVTEAGEVYTWGWREC----VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+++ G++Y WGW E +PS + + Q+ S+ + L + + P+D++
Sbjct: 232 ACISDGGDLYVWGWNESGQLGLPSRGLRKS-------QQKSSQQTGELCYDTSTPADEKL 284
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDM 230
E D F ++ P L+ ++P +I V+ G RHT ++
Sbjct: 285 ----------------KEEEEHEDVFISIQAFPALLDVSPSCEIQTVSCGSRHTAAVTTT 328
Query: 231 GQVWGWGYGGEGQLG 245
G ++ WG+G GQLG
Sbjct: 329 GDLYTWGWGEYGQLG 343
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G+ +T+VA GG H+ +SD G ++ WG+ GQLGL SR
Sbjct: 218 GMSMTRVATGGWHSACISDGGDLYVWGWNESGQLGLPSR 256
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDE---------FFTLSPCLVTLNPG-VKITKVA 218
D+ ++ KR K+ S + + A G + + L P L PG +K +A
Sbjct: 114 DRIETWDLQKREKSPSWSMDIKTHAEGSDVNLPLVPGGYIALKPPLYCTLPGHLKARSLA 173
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
G H ++L+ G V+ WG G GQLG G
Sbjct: 174 LGAEHAVLLTATGAVYSWGLGSHGQLGHG 202
>gi|343425648|emb|CBQ69182.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 544
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 45/190 (23%)
Query: 100 LPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWR---EC-VPSAKVTRDFG--SAGSFQK 151
LP AS +V AA G +H + +T AG VY+ G +C P ++ F G F K
Sbjct: 123 LPAGASGQIVSAACGRSHTLLITAAGSVYSAGLNTSGQCGHPESQTVPLFTRIETGPFIK 182
Query: 152 D------------------STGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
D +GK + +E+ + R GE + +
Sbjct: 183 DRDPVVAASCGLTFSMLLTQSGKVYTMGSSEKGQLGNGRTGEHFTTSNRLA--------- 233
Query: 193 ASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI- 250
F T S P LV I ++A G +HT+ L D G V+ WG+GG G+LGLGS+
Sbjct: 234 -----FNTFSDPFLVKQLADKTIVQIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQD 288
Query: 251 KMVPTPHLIP 260
++VPT L+P
Sbjct: 289 QLVPT--LVP 296
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 34/178 (19%)
Query: 41 PIPARLCGGDSWKD---VCGGGCG--FALATSESGKLITWGSADD-------EGQSYLTS 88
P+ R+ G KD V CG F++ ++SGK+ T GS++ G+ + TS
Sbjct: 170 PLFTRIETGPFIKDRDPVVAASCGLTFSMLLTQSGKVYTMGSSEKGQLGNGRTGEHFTTS 229
Query: 89 GK--HGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
+ +PF + A ++V+ A G H +++ + G VY WG FG
Sbjct: 230 NRLAFNTFSDPFLVKQLADKTIVQIACGQQHTIALDDQGFVYVWG-------------FG 276
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
G S +Q L P + A E VV R K+ A + G F L+
Sbjct: 277 GYGRLGLGS--QQDQLVPTLVP---QFARENVVMRAKSIYAGPTNSAVVDGQSMFWLA 329
>gi|26326847|dbj|BAC27167.1| unnamed protein product [Mus musculus]
Length = 377
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 79/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P LV L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALVDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K + QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLE 263
+ ++ P L+ L+
Sbjct: 197 T-LEAELEPRLLEALQ 211
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVT 305
E G L V + A + + + +CG RH+AVVT
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALVDLPLGSDAVMASCGSRHTAVVT 317
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 106/264 (40%), Gaps = 46/264 (17%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGW 113
CGG L +E G++ G +D GQ L ++G E E LP EA AAG
Sbjct: 49 CGGA--HTLVLTEEGRVYASG-LNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGD 105
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-----KDSTGKQSALPTEQAPPS 168
H +++E G VY WG R G + Q KD + AL E +
Sbjct: 106 FHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLAL 165
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTL-------SPCLVTLNPGVKITKVAAGG 221
+ EV+ + + R F++ +P LV VK++KVAAG
Sbjct: 166 SEEG--EVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGL 223
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
H+ L + G ++ +G G E QLGLG + + P +P + P
Sbjct: 224 THSACLDEQGSLFTFGKGRECQLGLGGD-RDISEPKRVPVIP--------P--------- 265
Query: 282 SSGKAGRSYVKEIACGGRHSAVVT 305
V+EIACGG H+ ++
Sbjct: 266 ---------VEEIACGGYHTGAIS 280
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+ P++ P++ P+ CGG A S +G+L WGS + L G
Sbjct: 255 SEPKRVPVIPPVEEIACGGYH-----------TGAISRNGQLYMWGSNE---YGCLGFGY 300
Query: 91 HGETPEPFPLPTEAS-----VVKAAAGWAHCVSVTEAGEVYTWGW 130
+ P+ E + V + GW H +++T G+V+ WGW
Sbjct: 301 KHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGW 345
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 89/221 (40%), Gaps = 42/221 (19%)
Query: 59 GCGFALATSESGKLITWGSADD----EGQSYLTSGKHG-------ETPEPFPLPTEASVV 107
G +LA SE G++++WG++ + G+ + +S TP + V
Sbjct: 158 GAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVS 217
Query: 108 KAAAGWAHCVSVTEAGEVYTWG-WRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTEQ 164
K AAG H + E G ++T+G REC RD S K+ + P E+
Sbjct: 218 KVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDI---------SEPKRVPVIPPVEE 268
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASG----DEFFTLSPCLVT-LNPGVKITKVAA 219
G + R +E G + T P LV +++T+V
Sbjct: 269 IACGGYHTG--AISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQC 326
Query: 220 GGRHTLILSDMGQVWGWGYGGE------------GQLGLGS 248
G +HT+ L+ G V+ WG+GG GQLGLG+
Sbjct: 327 GWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGN 367
>gi|47219820|emb|CAG03447.1| unnamed protein product [Tetraodon nigroviridis]
Length = 162
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 27/142 (19%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V++ AAG H V +++ G++Y WGW E G S + LP + +
Sbjct: 3 VIRVAAGGWHSVCISDGGDLYVWGWNE-------------TGQLGLPSRSLRRTLPQQSS 49
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRH 223
P +AG + +EE F ++ P L+ ++P +I V+ G RH
Sbjct: 50 P----KAGASSAEAPHAGGKQEEV--------FISIQAFPALLDVSPSCEIMAVSCGSRH 97
Query: 224 TLILSDMGQVWGWGYGGEGQLG 245
T ++ G ++ WG+G QLG
Sbjct: 98 TAAVTTTGDLYTWGWGDYSQLG 119
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ +VAAGG H++ +SD G ++ WG+ GQLGL SR P A+S +
Sbjct: 3 VIRVAAGGWHSVCISDGGDLYVWGWNETGQLGLPSRSLRRTLPQQSSPKAGASSAEAPHA 62
Query: 274 LVRQGSVNSSGKAGRSY--------VKEIACGGRHSAVVT 305
+Q V S +A + + ++CG RH+A VT
Sbjct: 63 GGKQEEVFISIQAFPALLDVSPSCEIMAVSCGSRHTAAVT 102
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ ++AAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQIAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ ++AAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQIAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ ++AAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQIAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Glycine max]
Length = 474
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 134/319 (42%), Gaps = 69/319 (21%)
Query: 18 KETVVYMWGY----LPGTSPEKSPILSP--IPARLCG-----GDSWKDVCGGGCG--FAL 64
+++ +Y+WGY G ++ + P +P L G W DV CG
Sbjct: 17 RKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARWLDV---ACGREHTA 73
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC-VSVTEAG 123
A + G L TWG A+D GQ + + + PE E+ VK+ + AHC + E
Sbjct: 74 AIASDGSLFTWG-ANDFGQLGDGTEERRKLPEKVK-QLESEFVKSVSCGAHCSACIAEPH 131
Query: 124 E---------VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--------ALPTEQAP 166
E ++ WG + + + R F G+F+ ++ ++ AL E
Sbjct: 132 ENDGTISTRRLWVWGQNQ---GSNLPRLF--WGAFKPNTIIREVSCGAVHVVALSEEGLL 186
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + R T + + +S +F +P LV KI KV+ G HT +
Sbjct: 187 QAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELV------KIAKVSCGEYHTAV 240
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+SD G+V+ WG G GQLG S L++ D+ LL R+ V G
Sbjct: 241 ISDKGEVYTWGLGNMGQLGHSS-------------LQYG----DKELLPRR-VVTLDG-- 280
Query: 287 GRSYVKEIACGGRHSAVVT 305
++K++ACGG H+ VT
Sbjct: 281 --IFIKDVACGGVHTCSVT 297
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 85/225 (37%), Gaps = 43/225 (19%)
Query: 95 PEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE F P T A + A G H ++ G ++TWG DFG G D
Sbjct: 49 PELFGCPAGTNARWLDVACGREHTAAIASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS---------GDEFFTLSP 203
T ++ LP + + ++ E EN + G + P
Sbjct: 95 GTEERRKLPEKVKQLESEFVKSVSCGAHCSACIAEPHENDGTISTRRLWVWGQNQGSNLP 154
Query: 204 CLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
L P I +V+ G H + LS+ G + WGY GQLG G + + +I
Sbjct: 155 RLFWGAFKPNTIIREVSCGAVHVVALSEEGLLQAWGYNEYGQLGRGVTCEGLQGACIIS- 213
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+A + P LV+ + +++CG H+AV++D
Sbjct: 214 -SYAKFLDEAPELVK--------------IAKVSCGEYHTAVISD 243
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 96/257 (37%), Gaps = 68/257 (26%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ + + G H V+++E G + WG+ E ++ R G Q A ++A
Sbjct: 167 IREVSCGAVHVVALSEEGLLQAWGYNE---YGQLGRGVTCEG-LQGACIISSYAKFLDEA 222
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT--------------------LSPCL 205
P E+VK K S + + E +T L P
Sbjct: 223 P--------ELVKIAKVSCGEYHTAVISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRR 274
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--------------SRIK 251
V G+ I VA GG HT ++ G ++ WG G GQLGLG + +
Sbjct: 275 VVTLDGIFIKDVACGGVHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVANDSQTFFR 334
Query: 252 MVPTPHLIPCLEHAASGKDRPLL------VRQGSVNSSGKAGR---SY------------ 290
+P + ++ A G L+ + N+ G+A +Y
Sbjct: 335 NIPVLVVPKGVQLVACGYSHTLISMSDGRIHGWGYNNYGQAANEKCTYAWYPSPIDWCVG 394
Query: 291 -VKEIACGGRHSAVVTD 306
V+++A GG HSAV+TD
Sbjct: 395 EVRKLAAGGGHSAVLTD 411
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 91/250 (36%), Gaps = 81/250 (32%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G +LA + G + WGS + EGQ L G +P + V + +AG+ H
Sbjct: 151 AAGSHHSLALTSDGGVFAWGS-NLEGQLGLPDVS-GLVNKPTKVHIPEPVKQISAGYYHS 208
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+G VY G E S K G SF KQ LP+
Sbjct: 209 TFLTESGLVYVCGESE---SGK----LGIDASFSTQVAPKQMQLPS-------------- 247
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
P V VA GG HT+IL++ G ++
Sbjct: 248 ---------------------------------PAVH---VACGGHHTVILAENGNLYCT 271
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLGLG+ + + P L+P R +L + + I+C
Sbjct: 272 GSNSSGQLGLGTNLSELHIPKLLP----------RGMLRNE------------TITRISC 309
Query: 297 GGRHSAVVTD 306
G H+AVVT+
Sbjct: 310 GESHTAVVTE 319
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 25/121 (20%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHAA 266
G KI ++AAG H+L L+ G V+ WG EGQLGL +V P + P + +A
Sbjct: 144 GSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVKQISA 203
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGR----------------SYVKEIACGGRHSAVVT 305
L G V + SGK G S +ACGG H+ ++
Sbjct: 204 GYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPAVHVACGGHHTVILA 263
Query: 306 D 306
+
Sbjct: 264 E 264
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ ++AAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQIAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 25/112 (22%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD+ + P V GV+I KVAAG H+L+LSD G V+ +G G +G LG G + + +
Sbjct: 149 GDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQL- 207
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LI L+ R V +IA G HS VV +
Sbjct: 208 VPKLISSLQ------------------------REKVVDIAAGSAHSLVVAE 235
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 112/282 (39%), Gaps = 59/282 (20%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--- 93
P+LS R+ G +L S+ G + ++G D S HG+
Sbjct: 159 PVLSLSGVRIVK-------VAAGAHHSLVLSDQGNVFSFGVGID------GSLGHGDQAR 205
Query: 94 --TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P+ VV AAG AH + V E+G+VY++G GS G+
Sbjct: 206 QLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFG-------------LGSEGALGH 252
Query: 152 DSTGKQSALPTE-----QAPPSDKRAG-EEVVKRRKTSSAREESENPASGDEFF------ 199
T S +P + Q P AG + K +E + G +
Sbjct: 253 GDT-DMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLG 311
Query: 200 -----TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
SP V + ++ AG H+L+L++ G+V+ +G GQLG G+ ++ P
Sbjct: 312 HFSRMIASPAQVQVEAAA--VEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNP 369
Query: 255 TPHLIPCLEH-----AASGKDRPLLVR-QGSVNSS--GKAGR 288
P LI LE A+G + L++ +G+V S GK GR
Sbjct: 370 EPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGR 411
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 117/287 (40%), Gaps = 68/287 (23%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVY 126
+G ++++G AD G G H + P + A V +AG H + T+ G +
Sbjct: 77 AGNVVSFGLADPSGH-----GDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLL 131
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-PSDKRAGEEVVKRR---KT 182
++G+ SA V D G G G Q T+ P P +G +VK
Sbjct: 132 SFGY----GSANVVVD-GRLGH------GDQR---TQMIPRPVLSLSGVRIVKVAAGAHH 177
Query: 183 SSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
S + N S GD+ L P L++ K+ +AAG H+L++++ G
Sbjct: 178 SLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESG 237
Query: 232 QVWGWGYGGEGQLGLG-SRIKMVP--TPHLI--PCLEHAASGKDRPLLVR------QGSV 280
V+ +G G EG LG G + + +VP H + P ++ AA G +L + +G V
Sbjct: 238 DVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRV 297
Query: 281 -----NSSGKAGRSYVK----------------EIACGGRHSAVVTD 306
NS G+ G + EI G HS V+T+
Sbjct: 298 LSFGQNSYGQLGLGHFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTN 344
>gi|387015158|gb|AFJ49698.1| Regulator of chromosome condensation-like [Crotalus adamanteus]
Length = 424
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 112/287 (39%), Gaps = 63/287 (21%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQS 84
G P K P L +P ++ ++ GG + SE+GK+ T+G +DEG
Sbjct: 43 LGLGPDVLARKRPALLQLPEKIIQAEA------GGV-HTVCLSETGKIYTFG-CNDEGAL 94
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
+ + G P + + VV+ +AG +H ++TE G V+ W
Sbjct: 95 GRDTSEEGSDAVPGLVDLKEKVVQVSAGDSHTAALTEDGHVFIW---------------- 138
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
G+F +D G L ++ EE+ SG F P
Sbjct: 139 --GAF-RDENGVIGLLAPQKG---------------------EENSQSTSGSLF----P- 169
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
V L V + K+A+G H ++S G ++ G G GQLG VP I +
Sbjct: 170 -VELQLDVPVVKIASGSHHLALVSSTGNLYTCGCGDNGQLG------RVPQ---IFVVRG 219
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSYPI 311
G +R LL + ++ G + ++++ CG + +T + +
Sbjct: 220 GRRGLERLLLPQVVTIKQRGCKTKGNIRDVFCGSYSTIAITQEGHVV 266
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 74/260 (28%), Positives = 105/260 (40%), Gaps = 30/260 (11%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWA 114
CG ALA + +G+L +WGS + EGQ L E +P + T A V A A G
Sbjct: 191 ACGMKHALALTNNGELYSWGS-NSEGQLGLGVDIRCEM-KPKLINTLAGVPIAFIACGGY 248
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT-EQAPPSDKRAG 173
H ++++++G ++ WG FG G + L T A G
Sbjct: 249 HSIAISKSGAIFGWG----------KNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACG 298
Query: 174 EE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL- 227
EE V + G + P V G +T+++ G RHTL L
Sbjct: 299 EEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 358
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
G+V+ WG GG GQLG S + TP ++ A +G +Q S + G
Sbjct: 359 PSQGRVYAWGLGGAGQLGNNS-TRSTTTPQVVRGPWVAPNGSSMMDFDKQFSSCTVGYV- 416
Query: 288 RSYVKEIACGGRH--SAVVT 305
VK I GG H + VVT
Sbjct: 417 ---VKHIFTGGDHCFATVVT 433
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 198 FFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
F SP +V TL + I ++A G +H L L++ G+++ WG EGQLGLG I+ P
Sbjct: 171 FMECSPRMVKTLGTSI-IVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKP 229
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
LI L + IACGG HS ++
Sbjct: 230 KLINTLAGVP------------------------IAFIACGGYHSIAIS 254
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 24/91 (26%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
K A G HT+ +++ GQ++ WG EGQLGL S+ M +P ++ L
Sbjct: 136 KAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTL------------- 182
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G S + +IACG +H+ +T+
Sbjct: 183 -----------GTSIIVQIACGMKHALALTN 202
Score = 44.7 bits (104), Expect = 0.058, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWA 114
CG +A +E G+L +WGS + EGQ L S E +P + +V+ A G
Sbjct: 137 AACGAYHTIAVNEWGQLFSWGS-NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMK 195
Query: 115 HCVSVTEAGEVYTWG 129
H +++T GE+Y+WG
Sbjct: 196 HALALTNNGELYSWG 210
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 22/257 (8%)
Query: 39 LSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
++P+ G S K V G ++ A + +G + TWG +++GQ L + P
Sbjct: 218 MTPVLVDF-GSKSIKIVDISAGWAYSAAVTSTGNVYTWG-FNEKGQLGLGDRWYHGNPRV 275
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSA 146
+ S+V A G H +++++G++YTWG + + KV
Sbjct: 276 IRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQ 335
Query: 147 GSFQKDSTGKQSALP-TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-PC 204
+ +TG + +E GE + + N D+ S P
Sbjct: 336 KKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPK 395
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-- 262
V VK+ KVA G HT+ ++ V+ WG+G G LG G R K P +P L
Sbjct: 396 QVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDR-KFQLVPQRVPSLSG 454
Query: 263 EHAAS---GKDRPLLVR 276
E +S G+ L+VR
Sbjct: 455 EEISSVSGGEKHTLIVR 471
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 98/257 (38%), Gaps = 58/257 (22%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
L P +L G K + G +LA +E G + +WG GK GE P
Sbjct: 23 LDPAVIQLLKGKRIKQIACGE-AHSLAVTEFGDVYSWGR-----------GKEGELGHPQ 70
Query: 99 PLPT----------EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV--------- 139
T +VK A G H +++T+ G+VY WG + + K
Sbjct: 71 KAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEIDATKSGVKSQGGLV 130
Query: 140 ----TRDFGSA---GSFQKDSTGKQSALPTEQAPPS-------------DKRAGEEVVKR 179
+ F S S G+++A E A S D + EE
Sbjct: 131 EMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNPTANGLVTDDQEEEEEFLP 190
Query: 180 RKTSSAREESENPASGDEF------FTLSPCLVTL-NPGVKITKVAAGGRHTLILSDMGQ 232
++E + SG + ++P LV + +KI ++AG ++ ++ G
Sbjct: 191 EAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGN 250
Query: 233 VWGWGYGGEGQLGLGSR 249
V+ WG+ +GQLGLG R
Sbjct: 251 VYTWGFNEKGQLGLGDR 267
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 25/106 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P ++ L G +I ++A G H+L +++ G V+ WG G EG+LG + P P LI
Sbjct: 23 LDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAP-PALIK 81
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
LEH + ++ACG HS +TD
Sbjct: 82 ALEHER------------------------IVKVACGNYHSLALTD 103
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYCHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|224118018|ref|XP_002331537.1| predicted protein [Populus trichocarpa]
gi|222873761|gb|EEF10892.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 100/281 (35%), Gaps = 43/281 (15%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P P L+P DS + + GG A TS G + TWG + G
Sbjct: 16 NPAFLPTLNPFL------DSVRSIALGGVHSAAITS-LGHIFTWGYG-----GFGALGHS 63
Query: 92 GETPEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEVYTWGWRE--CVPSAKVTRDFGS 145
E FP E S + + H +VTE+GEVYTWG E R
Sbjct: 64 VYHRELFPRLVEGSWDGKIRCISTSGTHTAAVTESGEVYTWGREEGDGRLGLGPGRGPNE 123
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
G K +P + + + + GD+ P
Sbjct: 124 GGGLSIPCKVKTLPVPVATVYCGGFFTMVLTEEGQIWNWGANSNYELGRGDKVGGWRPKP 183
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
+ +I ++A GG H L L+D G+V WG+GG GQLG S I+ P +I L
Sbjct: 184 IPSLEDARIIQIAGGGYHCLALTDEGKVLSWGFGGHGQLGH-SSIQSQKIPAVIDALA-- 240
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+V IACGG SA +TD
Sbjct: 241 ----------------------DQHVIYIACGGSSSAAITD 259
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 84/218 (38%), Gaps = 37/218 (16%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVT 120
A S++G L TWG G Y G E P P EA V + A G H ++
Sbjct: 105 AISDTGALWTWG-----GGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALL 159
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
GEVY WG RE G + LP + + +
Sbjct: 160 AGGEVYCWGDRE-------------NGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGF 206
Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
T++ ++ G+E ++PC V GV++ +VA GG H+ +++
Sbjct: 207 HTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTED 266
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
G V +G G GQLG G + T +PCL A G
Sbjct: 267 GDVLTFGGGEHGQLGHGDK-----TNRTVPCLVKALEG 299
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 100/265 (37%), Gaps = 63/265 (23%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G + +E + +WG DD G+ P T S+ + G H +
Sbjct: 47 GSGHTVVLTEDKDVWSWGRGDD-GRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAA 105
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-PSDKRAGEEVV 177
+++ G ++TWG G + K G + P AP + G EV
Sbjct: 106 ISDTGALWTWG----------------GGMYGKLGHGNEVGHP---APCRVEAFIGREVE 146
Query: 178 K----RRKTSSAREESENPASGD------------EFFTLSPCLVTLNPGVKITKVAAGG 221
+ R T++ E GD E L L L GVKIT++AA G
Sbjct: 147 QIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEAL-KGVKITQIAACG 205
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN 281
HT ++ G +W WG G G+LG G+ V PC G VR
Sbjct: 206 FHTAAITQDGALWSWGEGKFGRLGQGNEKNQVT-----PCCVEGLQG------VR----- 249
Query: 282 SSGKAGRSYVKEIACGGRHSAVVTD 306
VK++ACGG HSA VT+
Sbjct: 250 ---------VKQVACGGFHSACVTE 265
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 25/95 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ + ++A G HT++L++ VW WG G +G+LG PHL+ L
Sbjct: 39 LTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADN-HWKYVPHLVSAL--------- 88
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+GK+ +K++ CG H+A ++D
Sbjct: 89 -----------TGKS----IKQVTCGSYHTAAISD 108
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 78/210 (37%), Gaps = 25/210 (11%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G++ WG ++ + +H P+ + + AA H ++T+ G +++WG
Sbjct: 162 GEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWG 221
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
FG G + K P R + ++ E+
Sbjct: 222 ----------EGKFGRLGQGNE----KNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDG 267
Query: 190 E----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ GD+ PCLV G I +V G HT+ LS+ G+V+ +G G
Sbjct: 268 DVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNG 327
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
G+LG G+ K P L+ L + K
Sbjct: 328 DHGKLGHGANAKS-ALPKLVESLANMKVAK 356
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLADIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGLDCKKQA------------SPKLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLADIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGLDCKKQA------------SPKLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 98/261 (37%), Gaps = 53/261 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
G ++A G + +WG +D GQ L G + P P L ASVV
Sbjct: 33 GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
A S E ++Y+WGW DFG G F + Q
Sbjct: 90 ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 138
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D V S R ++ G+ +L P + GV++ +AAG HT
Sbjct: 139 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 198
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+++ G ++GWG+G G LGLG R DR + + SVN
Sbjct: 199 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 236
Query: 285 KAGRSYVKEIACGGRHSAVVT 305
G+ V +ACG RH+ V+
Sbjct: 237 --GQKMVL-VACGWRHTITVS 254
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 77/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+ +G
Sbjct: 200 AVTEDGDLYGWGWGR-YGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 258
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 259 IYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDTTISQISGGWRHTMA 304
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + GD SP V K+ +VA G RHTL L++ V+
Sbjct: 305 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVF 364
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG G + P +I L
Sbjct: 365 SWGRGTSGQLGHGEIVDR-NIPKMIDAL 391
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P E VV+ A GW H +
Sbjct: 297 GGWRHTMALAADGKLYGWG-WNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 355
Query: 118 SVTEAGEVYTWG 129
++TEA V++WG
Sbjct: 356 ALTEAKNVFSWG 367
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 111/302 (36%), Gaps = 91/302 (30%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKH 91
++ +L P + +DV GCG + + G + T G +D GQ L K
Sbjct: 18 DEEIVLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKS 71
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+ PE ++V + G AH +++ + G+VY+WG
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL--------------------- 110
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
DS G+ L +E E + R S +
Sbjct: 111 DSDGQLGLLGSE----------EYIRVPRNIKSLSD------------------------ 136
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 100/293 (34%), Gaps = 74/293 (25%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G L TWG + K P +V+AA G HC++V +
Sbjct: 50 SLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRE--------------------------CVPSAKVTRDFGSAGSFQKDSTGK 156
G Y WG E C P V R + G+ T +
Sbjct: 110 GRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKL-VVRQVAAGGTHSVVLTRE 168
Query: 157 QSALPTEQA-PPSDKRAGEEVVKRRKTSSAR-----------------------EESENP 192
Q PP D + V+ + + R E
Sbjct: 169 GHVWSWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGNNEYGQL 228
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD P V + + +AAGG H+ L+D G+V+GWG G G+LG G K
Sbjct: 229 GTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDK- 287
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ ++P + +G+D + +++CGG HS +T
Sbjct: 288 --SSKMLPQKVNLLAGED--------------------IIQVSCGGTHSVALT 318
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 112/300 (37%), Gaps = 90/300 (30%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S IP R+ G ++ + + G LA E+G L W
Sbjct: 167 REGHVWSWGQPWPPGDIKQIS-----IPVRVQGLENVRLIAVGAF-HNLALEENGTLWAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G+ Y G P P+P + ++V AAG H ++T+ GEVY WG
Sbjct: 221 GN-----NEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRG 275
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
E G G D + K
Sbjct: 276 E----------HGRLGFGDNDKSSK----------------------------------- 290
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+ P V L G I +V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 291 ---------MLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRKVT 341
Query: 252 M---VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK--AGRSYVKEIACGGRHSAVVTD 306
+ P IP E G N + + G+ K +ACGGRH+ + +
Sbjct: 342 TGQPLDVPVKIPPPE--------------GQFNDAAEDDDGKWVAKVVACGGRHTLAIVE 387
>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
Length = 1865
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 74/200 (37%), Gaps = 60/200 (30%)
Query: 54 DVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+V CG LA + +G + WGS+ GQ L TPE + ++ A A
Sbjct: 872 EVLSVSCGHCHTLAVTNNG-VYAWGSSQ-FGQLGLGKVLQCSTPELITSLAQEVIIDAVA 929
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H V++T G V+TWGW G G +T K+
Sbjct: 930 GQYHSVALTADGRVFTWGW-------------GVHGQLGHGNTDKK-------------- 962
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
++P LVT G I + AG HTL LS G
Sbjct: 963 -----------------------------MTPTLVTSLLGTVIRYITAGHAHTLALSTEG 993
Query: 232 QVWGWGYGGEGQLGLGSRIK 251
V+ +G GQLG+GS +K
Sbjct: 994 IVYAFGCNIFGQLGVGSNVK 1013
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 29/224 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G LA S G + +G + GQ L G + ++ P + + G+ H +
Sbjct: 981 AGHAHTLALSTEGIVYAFG-CNIFGQ--LGVGSNVKSSVPMKVSLSERITLITTGYFHNL 1037
Query: 118 SVTEAGEVYTWG-----WRECVPSAKVTR--------DFGSAGSFQKDSTGKQSALPTEQ 164
+V+ ++Y WG R + K TR F + F+K + E+
Sbjct: 1038 AVSYTNKLYIWGASPQVLRLQAQTQKRTRILEQRDLKQFENIDEFEKVTDSANMNDTNEE 1097
Query: 165 APPSD--------KRAGEEVVKRRKTSSAREESENPASGDEFFT-LSPCLV--TLNPGVK 213
++ K G R+K ++ +S N S +E T L P +V +L G
Sbjct: 1098 VLENNAQNRNVQSKACGISTESRKKLDNSCLKSVNVGSLEEAQTHLKPTIVDTSLVKG-D 1156
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
I +++AG H +++ G ++ WG +GQ+G GSR ++ +PTP
Sbjct: 1157 IIRISAGCHHNALITKDGSLYMWGRNLDGQIGNGSRREVPIPTP 1200
Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPT 255
+P L+T I AG H++ L+ G+V+ WG+G GQLG G + KM PT
Sbjct: 912 TPELITSLAQEVIIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKMTPT 966
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 105/275 (38%), Gaps = 38/275 (13%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G+L TWG + K +P P S+V+AA G HC++V +
Sbjct: 56 SLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDK 115
Query: 123 GEVYTWG---WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
G Y WG + +C A+ D A ++D Q P + VV
Sbjct: 116 GRAYAWGGNEYGQCGEEAERKEDGTRA--LRRDIPIPQGCAPKLKVRQVAAGGTHSVVLT 173
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+ P GD +P V VK+ +A G H L L++ G +W WG
Sbjct: 174 QDGHVWTWGQPWP-PGDIKQISTPVRVQGLENVKV--IAVGAFHNLALTEDGILWAWGNN 230
Query: 240 GEGQLGLGS---RIKMVPTPHL--IPCLEHAASGKDRPLLVRQGSVNSSGK--------- 285
GQLG G R + + L + ++ AA G L ++G V + G+
Sbjct: 231 EYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFG 290
Query: 286 ---------------AGRSYVKEIACGGRHSAVVT 305
AG + +++CGG HS +T
Sbjct: 291 DDKSSHMVPQKVELLAGEDII-QVSCGGTHSVALT 324
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H++ L+ G+++ +G G G+LG G + V T
Sbjct: 292 DKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYG---RKVTT 348
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
H + + P+ + + G+ + +ACGGRH+ +
Sbjct: 349 GHPM----------EVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAI 387
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 58/291 (19%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK-AAAGWAHC 116
G G LA +E+G + +WG D + H + PE P +K AG+ H
Sbjct: 439 GSDGHTLALAETGVVYSWGDGDYGKLGHGNCATHKQ-PERITGPFLGKTIKYIHAGYRHS 497
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA---G 173
+VT+ G++YTWG D G G DS + +PT+ A ++ + G
Sbjct: 498 AAVTDDGKLYTWG----------EGDHGRLG--HGDSNARY--VPTQVAGLAEVGSVACG 543
Query: 174 EE----VVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
V K KT S E +G+ P +V G+ I KV AG ++ L
Sbjct: 544 SSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMAL 603
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------------EHAASGKDRPLLV 275
+ G+V+ WG G LG GS +V P + L H + D +
Sbjct: 604 TTAGEVYTWGSG--AILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVF 661
Query: 276 RQGSVNSSGKAGRSY------------------VKEIACGGRHSAVVTDMS 308
G+ NS G+ G+ + +++I+ G HS T MS
Sbjct: 662 AWGT-NSMGQCGQGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWTSMS 711
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 77/199 (38%), Gaps = 59/199 (29%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G G +LA +ESG++ +WG D + + + L TE VV+ A G+ H
Sbjct: 3419 GSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTE-QVVQVACGFKHSA 3477
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
VT G+++T+G DFG G ++K+ E V+
Sbjct: 3478 VVTSDGKLFTFG----------NGDFGKLG----------------LGSVANKKLPERVM 3511
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ-VWGW 236
G +I +VA G HT +S G VW +
Sbjct: 3512 ALE------------------------------GYRIGQVACGLNHTACVSTDGMTVWTF 3541
Query: 237 GYGGEGQLGLG-SRIKMVP 254
G G G+LGLG + +K++P
Sbjct: 3542 GEGDYGKLGLGYATMKLLP 3560
Score = 43.9 bits (102), Expect = 0.098, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P ++T I +A G H L L+ G+V GWG GEGQLGL + +V P +I
Sbjct: 3610 FKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGL-PHVSLVRHPEII 3667
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 113/299 (37%), Gaps = 50/299 (16%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
L +P R+ G V GG G +LA G + WG+ + GQ L G EP
Sbjct: 49 LRRVPVRVLGLSGVVTVAAGG-GHSLAVHSDGTVWAWGN-NSSGQ--LGDGSFDNRAEPV 104
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
+ + VV AAG H ++V+ G V+ WG G G D+ +
Sbjct: 105 RVRGLSGVVAVAAGGYHSLAVSADGTVWAWG----------NNSSGQLGDGSFDNRAEPV 154
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKI 214
+ + G + R +N + EF + P V +++
Sbjct: 155 RVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQV-----LRV 209
Query: 215 T---KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASG 268
T V+AG H+L +S G VW WG GQLG+ ++ P +P + + A+G
Sbjct: 210 TGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSVAMAAG 269
Query: 269 KDRPLLVR-QGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVVTD 306
+ L VR G+V N G+ G + V +A G HS V D
Sbjct: 270 DNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRD 328
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 99/265 (37%), Gaps = 43/265 (16%)
Query: 11 NEKMEECKETVVYMWG---YLPGTSPEKSPILSPIPARLCGGDSWKDVCG-----GGCGF 62
N + + V+ WG + +P+LS IP R+ +V G G
Sbjct: 220 NHSLAVSADGTVWAWGDNSHGQLGIARTTPLLS-IPGRV------PEVRGSVAMAAGDNH 272
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G + WGS G L +G + EP +P V AAG H ++V +
Sbjct: 273 SLAVRDDGTVWAWGS---NGHGQLGNGFMVDNSEPGRVPGLEGVGAVAAGSNHSLAVRDD 329
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V+ WG + V G D T Q + PT S V
Sbjct: 330 GTVWAWG-------SNVEGQRG-------DGTTGQLSAPTRVPGVSGVVGVAANVFHSLA 375
Query: 183 SSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
SA + + GD SP V ++ ++ VAAG H+L L G V W
Sbjct: 376 VSADGSAWAWGHNSHGELGDGSTRNSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAW 435
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPC 261
G GQLG G+R H +P
Sbjct: 436 GDNTFGQLGDGTR-----ASHSVPA 455
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 105/277 (37%), Gaps = 50/277 (18%)
Query: 23 YMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCG--GGCGFALATSESGKLITWGSAD 79
+ WG+ G + S SP P R+ D K+V G +LA G ++ WG
Sbjct: 383 WAWGHNSHGELGDGSTRNSPAPVRV---DGLKEVVAVAAGSSHSLALLADGTVLAWG--- 436
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR-------- 131
D L G P + VV AAG +H +++ G V+TWG+
Sbjct: 437 DNTFGQLGDGTRASHSVPAQVRGLRGVVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDG 496
Query: 132 --------------ECVPSAKV-------TRDFGSAGSFQKDSTGK--QSALPTEQAPPS 168
E V + R G+A ++ ++ G+ L + AP
Sbjct: 497 TTTYRYEPVAVKGLEGVVAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVE 556
Query: 169 DKRAGEEVVKRRKTSSAREESENPAS---------GDEFFTLSPCLVTLNPGVKITKVAA 219
K A + V + S A P + GD T P + + ++ VAA
Sbjct: 557 VKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAGEVVAVAA 616
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPT 255
G H+L LS G VW WG GQLG G+ ++ PT
Sbjct: 617 GNGHSLALSPEGGVWAWGQNARGQLGEGTLDRRLAPT 653
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 29/231 (12%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKA 109
K V GC + ++G L G +D GQ L ++GE P P V+
Sbjct: 173 KRVADVGCSYFHTAIVMDNGDLYACG-CNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAV 231
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G + ++ G V +G D G G DST + + PT A P D
Sbjct: 232 ACGQHYTIASLRDGGVVAFG----------KNDHGQLG---LDSTSEPVSQPTRLAAPLD 278
Query: 170 KRAGEEVVKRRKTSSA-----------REESENPASGDEFFTLSPCLVTLNPGVKITKVA 218
+ ++ ++ R + G + P V ++IT+VA
Sbjct: 279 RLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVA 338
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
G HTL+LSD G+V+ +G GQLGL + + + +P LI L + K
Sbjct: 339 CGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCL-SPQLISTLRNKTVTK 388
>gi|340370446|ref|XP_003383757.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Amphimedon queenslandica]
Length = 529
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 30/210 (14%)
Query: 63 ALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFPLPTEASVV-KAAAGWAHCVSVT 120
LA +E G + WG A+ GQ ++ H P+P +V K A G H ++++
Sbjct: 87 VLALTEDGTIYAWG-ANGYGQLGRGSTSVHSNLPKPVNHALGGVIVSKVACGGFHSLALS 145
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G+VY+WG+ C G G D+T + + P D + V
Sbjct: 146 NKGDVYSWGFNNC----------GQLGC--GDTTSRYN--PNRVTGLLDGKTCIHVTCNH 191
Query: 181 KTSSA-----------REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+S A + S G L P V +N I ++ G H L LS+
Sbjct: 192 TSSFALTGEGEILSWGQNGSGQLGIGSTLQQLQPVNVQINDAF-IDQIVTGYSHALALSE 250
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
G ++ WG GQLG S+ + V +P +I
Sbjct: 251 CGSIYAWGANTHGQLGNASK-QCVSSPTII 279
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
L P+ ++ D++ D G ALA SE G + WG A+ GQ S + +P
Sbjct: 223 LQPVNVQI--NDAFIDQIVTGYSHALALSECGSIYAWG-ANTHGQLGNASKQCVSSPTII 279
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS---AKVTRDFGS 145
AS V AA +H + T +G+VY WG EC A + DF S
Sbjct: 280 NNIGRASEV-AAIHLSHISAATISGKVYIWG--ECCHQNVCAPLVTDFNS 326
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 28/99 (28%)
Query: 211 GVKITKVAAGGR-HTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLEHAAS 267
G+ I+ +A G H L L++ G ++ WG G GQLG GS +P P + HA
Sbjct: 73 GLNISSIAYGSDPHVLALTEDGTIYAWGANGYGQLGRGSTSVHSNLPKP-----VNHALG 127
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G V ++ACGG HS +++
Sbjct: 128 G--------------------VIVSKVACGGFHSLALSN 146
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 96/250 (38%), Gaps = 39/250 (15%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F++A +ESG L WG + + G+ E P+ SVV+ A G HC+++TE
Sbjct: 92 FSIAIAESGLLFGWGRSLN-GELMCKQDSLHE-PKLLDKIMHWSVVQVACGAQHCIALTE 149
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS----FQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
G + +WG + G S + +A P Q +G
Sbjct: 150 EGTILSWG-------SNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSP 202
Query: 178 KRRKTSSAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + G+ + F SP LV ++ VA G H++ + G V+ W
Sbjct: 203 SGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSW 262
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G+GG GQLG S A + + ++ G+ V +I C
Sbjct: 263 GHGGNGQLGHNSM---------------ANVTQPKKIMELMGTT----------VCQICC 297
Query: 297 GGRHSAVVTD 306
G RH+ +TD
Sbjct: 298 GRRHTISLTD 307
>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
Length = 478
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 117/314 (37%), Gaps = 84/314 (26%)
Query: 56 CGGGCGFALA-------TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
CG C A+A T + +L WG L SG F L T + +
Sbjct: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNYPRLFSG-------AFALNT--IICQ 171
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+ G H V+++E G + WG+ E ++ R G Q A ++AP
Sbjct: 172 VSCGAVHVVALSEDGLLQAWGYNE---YGQLGRGITCEG-LQGPRVINAYAKFLDEAP-- 225
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFT--------------------LSPCLVTL 208
E+VK + S + + E +T L P V
Sbjct: 226 ------ELVKITRVSCGEYHTAAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVA 279
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--------------SRIKMVP 254
G+ IT VA GG HT ++ G ++ WG GQLGLG S ++ +P
Sbjct: 280 LDGILITDVACGGVHTCAVTQKGALYAWGGSQFGQLGLGPQTGSFSFIPSDTESFLRNIP 339
Query: 255 TPHLIPCLEHAASGKDRPLL-VRQGSV-----NSSGKAGR---SY-------------VK 292
++ A G L+ +R G + NS G+A +Y V+
Sbjct: 340 ALVFPTGVQLVACGHSHTLICLRDGRIHGWGYNSYGQAANEKTTYAWYPSPVDWCVGEVR 399
Query: 293 EIACGGRHSAVVTD 306
++A GG HSAV+TD
Sbjct: 400 KLAAGGGHSAVLTD 413
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 88/233 (37%), Gaps = 57/233 (24%)
Query: 94 TPEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
+PE F P A+ + A G H +V G ++TWG E FG G +
Sbjct: 50 SPELFGCPAGANARWLDIACGREHTAAVASDGSLFTWGANE----------FGQLGDGTE 99
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRK-----TSSAREESENPAS------------ 194
+ ++ P K+ E VK T++ E EN +
Sbjct: 100 EG---------KKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWVWGQN 150
Query: 195 -GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
G + L LN I +V+ G H + LS+ G + WGY GQLG G + +
Sbjct: 151 QGSNYPRLFSGAFALN--TIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEGL 208
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P +I +A + P LV+ + ++CG H+A +++
Sbjct: 209 QGPRVINA--YAKFLDEAPELVK--------------ITRVSCGEYHTAAISE 245
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 84/214 (39%), Gaps = 40/214 (18%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
VCG CG+ ++ G ++ WG + GQ TS P + + A
Sbjct: 124 VCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSL---LPRTVSTLYNEKIRQIA 180
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G AH ++++ GE+Y+WG AG+ + GK + A P
Sbjct: 181 CGMAHTLALSVNGEIYSWG----------------AGADGQLGVGKHQEETADVATPQKV 224
Query: 171 RAGEE------VVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLN-PGVK 213
R EE R + ++ GD SP +V + ++
Sbjct: 225 RVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLR 284
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
I VAAGG HT +LSD G+++ G G GQLG G
Sbjct: 285 ICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHG 318
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 78/213 (36%), Gaps = 51/213 (23%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
+ A G H V+VTE GEV +WGW GS +F + +P
Sbjct: 73 IYVACGGHHTVAVTEDGEVVSWGWGN-------EGQLGSGNAFDQ-------TVPAVVKA 118
Query: 167 PSDKRAGEEVVKRRKTSSARE----------ESENPASGDEFFTLSPCLVTLNPGVKITK 216
S+ R T+ + S GD +L P V+ KI +
Sbjct: 119 LSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQ 178
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHAASGKDRPL 273
+A G HTL LS G+++ WG G +GQLG+G + V TP + E
Sbjct: 179 IACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDE---------- 228
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ IACG RH +TD
Sbjct: 229 --------------EEKFEFIACGSRHCMAITD 247
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 27/92 (29%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLV 275
VA GG HT+ +++ G+V WG+G EGQLG G+ P ++ L H G
Sbjct: 75 VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQT-VPAVVKALSNHRVCG------- 126
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
+ACG H+AVVTD+
Sbjct: 127 ------------------VACGYYHTAVVTDV 140
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
KI K A G HTL++S G+V+ WG +GQLG G
Sbjct: 348 KIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTG 382
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 79/200 (39%), Gaps = 12/200 (6%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVS 118
++A + G + TWG + G T E P + S + A H +
Sbjct: 95 SVALTHQGDVFTWGYG-----GFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAA 149
Query: 119 VTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+GE+Y WG E R G S K +P
Sbjct: 150 ITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALT 209
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + + + GD P V GV+IT++A GG H+L L++ G+V W
Sbjct: 210 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 269
Query: 237 GYGGEGQLGLGS-RIKMVPT 255
G+GG GQLG S R + VPT
Sbjct: 270 GHGGHGQLGSSSLRNQKVPT 289
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 108/287 (37%), Gaps = 52/287 (18%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHG 92
++S L+ P R+ DS G CG F + G L WG D G+
Sbjct: 14 DQSFSLAQTPGRI-DADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDG-GRLGFGQENSV 71
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVT 140
P PL E S+ A G H V++T G+V+TWG+ RE VP +
Sbjct: 72 FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVP--RRV 129
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
D ++G +A TE +GE + R+ R +E
Sbjct: 130 DDSWDCKISAIATSGTHTAAITE--------SGELYMWGREEGDGRLGLGPGRGPNEGGG 181
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
LS V + V+ GG T+ L+ GQ+W WG +LG G + P P +
Sbjct: 182 LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP--V 239
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE VR + +IACGG HS +T+
Sbjct: 240 PSLEG----------VR--------------ITQIACGGYHSLALTE 262
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGW 113
CGG F +A ++ G+L WG+ + L G + EP P+P+ + + A G
Sbjct: 200 CGGF--FTMALTKEGQLWNWGANSN---YELGRGDNLGGWEPMPVPSLEGVRITQIACGG 254
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++TE G+V +WG G G S Q +PTE +DK
Sbjct: 255 YHSLALTEEGKVLSWG-------------HGGHGQLGSSSLRNQK-VPTEIEALADK--- 297
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
KI +A+GG + ++D G++
Sbjct: 298 ---------------------------------------KIVFIASGGSSSAAITDGGEL 318
Query: 234 WGWGYGGEGQLGLGSRIKMVPTP 256
W WG + QLG+ ++ TP
Sbjct: 319 WMWGNAKDFQLGVPGLPEIQTTP 341
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 101/253 (39%), Gaps = 55/253 (21%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
S L+TWGS + + K + TPE P + + + G + ++TE G+VY
Sbjct: 541 SRGLMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYM 600
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV-------KRR 180
WG R V + + G+ G+F +Q P + +E+V
Sbjct: 601 WG-RGSVKNPPIA-TLGN-GTFD------------DQLLPQKVESLQEIVVISIGFYHSA 645
Query: 181 KTSSARE-------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
S E E GD F P +V +T+V G +HT+ L+ G+V
Sbjct: 646 AVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKV 705
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+ WG GQLGLG K TP L+ L+ + ++ +
Sbjct: 706 FTWGTSEYGQLGLGDTQKNC-TPMLVTSLD------------------------KYHIIQ 740
Query: 294 IACGGRHSAVVTD 306
IACG H+AV+T+
Sbjct: 741 IACGATHNAVLTN 753
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 70/301 (23%), Positives = 109/301 (36%), Gaps = 50/301 (16%)
Query: 41 PIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
P P RL + D+C CG ++ A +E+G + WG + T G +
Sbjct: 566 PTPERLPNFNI-SDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLL 624
Query: 99 PLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRE----------CVPSAKVTRDFGSA 146
P E+ +V + G+ H +V GE+ TWG E P KV + S
Sbjct: 625 PQKVESLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSH 684
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
Q K + T+ + + E GD +P LV
Sbjct: 685 WVTQVQCGEKHTICLTKNG--------------KVFTWGTSEYGQLGLGDTQKNCTPMLV 730
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE-GQLGLGSRIKMVP----------- 254
T I ++A G H +L++ +V +G G G + S MVP
Sbjct: 731 TSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLS 790
Query: 255 -----TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY----VKEIACGGRHSAVVT 305
T L C + G + L G+ + K + +++I+CGGRH A +T
Sbjct: 791 CGHYSTAALTECGDVYTWGSGQELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLT 850
Query: 306 D 306
D
Sbjct: 851 D 851
Score = 40.8 bits (94), Expect = 0.73, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 100/257 (38%), Gaps = 51/257 (19%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG + +++GK+ TWG+++ GQ L + TP + +++ A G H
Sbjct: 691 CGEKHTICLTKNGKVFTWGTSE-YGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNA 749
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF-----QKDSTGKQS-ALPTEQAPPSDKR 171
+T EV +G + SA + S ++ S G S A TE
Sbjct: 750 VLTNNREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWG 809
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+G+E+ TS A P LV I +++ GGRH L+D G
Sbjct: 810 SGQELGHGHGTSEAH----------------PKLVETLRNQSIRQISCGGRHMAFLTDSG 853
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+++ G GQLG HAA ++RP ++S K +
Sbjct: 854 KIYTSGKDPFGQLG------------------HAAGDQNRP-----KKIDSLLK---TTF 887
Query: 292 KEIACGGRHSAVVTDMS 308
I+CG H+A + D +
Sbjct: 888 MSISCGENHNAALFDTT 904
>gi|315040529|ref|XP_003169642.1| RNA transporter 2 [Arthroderma gypseum CBS 118893]
gi|311346332|gb|EFR05535.1| RNA transporter 2 [Arthroderma gypseum CBS 118893]
Length = 565
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 32/178 (17%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ VV+ AAG HCV++T G+V TWG + G+ +D+T +
Sbjct: 182 DVGVVQVAAGGMHCVALTHDGKVLTWGVND-------------QGALGRDTTWEGGLKDI 228
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ A K + E + D F + I +VAAG
Sbjct: 229 DDA----KSDCSSDSGSDSGLNPHESTPTALPSDAFPEETI----------IVQVAAGDS 274
Query: 223 HTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPLLV 275
+ L+D G V+GWG G EG LG + K+ TP LIP L+ H A G + L +
Sbjct: 275 SSFALTDDGLVYGWGTFRGNEGILGFDAETKVQATPKLIPGLKKITHIACGDNHALAI 332
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 97/267 (36%), Gaps = 61/267 (22%)
Query: 21 VVYMWGYLPG----------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSE 68
+VY WG G T + +P L P K + CG ALA
Sbjct: 284 LVYGWGTFRGNEGILGFDAETKVQATPKLIP---------GLKKITHIACGDNHALAIDS 334
Query: 69 SGKLITWGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
G + WGS G+ + K +G P F LP ++V G H +V ++G+V
Sbjct: 335 RGAVFAWGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NIVHVGCGSFHSFAVHKSGKV 392
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTEQAPPSDKRAGEEVVKRRKTS 183
Y WG + Q+ + ++ + PT +DK + T
Sbjct: 393 YGWGLNSYCETG-----------IQQGAGDDEAVILHPTVIDSLNDKSIVQICGGSHHTI 441
Query: 184 SAREESENPA--------SGDEFFTLSPCLV--------------TLNPGVKITKVAAGG 221
+ + E A SG + TLS V T PG K VAAG
Sbjct: 442 ARTADGECLAWGRIDGFQSGLKVDTLSDSAVIKDDRDRPRVLFEPTAVPGFKADYVAAGA 501
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGS 248
H++ + + G+ W WG+ Q G G+
Sbjct: 502 DHSIAIDNEGRAWTWGFSANYQTGQGT 528
>gi|443692774|gb|ELT94295.1| hypothetical protein CAPTEDRAFT_179088 [Capitella teleta]
Length = 394
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPC 261
P V G+ +T V+AGG H+ LSD+G ++ WG+ GQLG S+ +KM P I
Sbjct: 218 PQKVAALEGMSMTSVSAGGWHSAALSDIGDIYTWGWNERGQLGARSKGVKMKVEPESIES 277
Query: 262 LEHA-----------ASGKDRPLLVRQGSVNS---------SGKAGRSYVKEIACGGRHS 301
+ A ++ KD + V +V S S+ K+IACG RHS
Sbjct: 278 VRPAKIQKTQTGGIPSNYKDEEVNVETVNVQSIPSVLDVEDENHELLSF-KDIACGSRHS 336
Query: 302 AVVTD 306
A VTD
Sbjct: 337 AAVTD 341
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+A GW H ++++ G++YTWGW E G G+ K K E P+
Sbjct: 233 SAGGW-HSAALSDIGDIYTWGWNE----------RGQLGARSKGVKMKVEPESIESVRPA 281
Query: 169 DKRAGEE--VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + + K E+ N S + L + +A G RH+
Sbjct: 282 KIQKTQTGGIPSNYKDEEVNVETVNVQSIPSVLDVEDENHEL---LSFKDIACGSRHSAA 338
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRI 250
++D G ++ WG GQLGLG RI
Sbjct: 339 VTDDGSLYSWGCNDYGQLGLGDRI 362
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 24/196 (12%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+ S LTS + +P+ A++ A GW H + +++ G + + W PS
Sbjct: 41 QSHSSLTSTR---SPKHSVADKTANLQHMAIGWDHIIFLSDDGRLTSSSWN--TPSKTQF 95
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV-------KRRKTSSAREESENPA 193
+ S S + L +Q G+E++ T A E++ A
Sbjct: 96 ERYSSVAS-----SWNAVYLVNKQGQCHSANHGQELLPLPCESSTTNLTKIAAGETDVVA 150
Query: 194 SGD--EFFTL---SPCLVTL-NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
D + L +P + +P + I V+ G HT++LS +G V+ +G G GQLG G
Sbjct: 151 IDDRAQVHLLQKDAPIFKQIVSPKILIKSVSCGHEHTILLSKIGIVFTFGSGSRGQLGHG 210
Query: 248 SRIKMVPTPHLIPCLE 263
+ I+ P + LE
Sbjct: 211 T-IESQTQPQKVAALE 225
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 24/94 (25%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
IT+VA G +HTL ++ G+V+ WG GQLGL M+PTP ++ + L
Sbjct: 86 ITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMV-----------KSL 134
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
+Q V +IACG HS +T++
Sbjct: 135 ATKQ-------------VVQIACGRSHSMALTNV 155
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 67/286 (23%), Positives = 103/286 (36%), Gaps = 96/286 (33%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ GCG + + GKL ++G +D GQ L + EP ++ + A
Sbjct: 35 DIVQVGCGENHTILVMKDGKLFSFG-LNDYGQ--LGHCRSRTRAEPVDGLEAHNITQVAC 91
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H ++ E GEV+ WG S + Q ++S +PT +
Sbjct: 92 GAQHTLAQNEWGEVFAWG---------------SNSNGQLGLNVEESMMPTPK------- 129
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+VK T ++ ++A G H++ L+++G
Sbjct: 130 ----MVKSLATK-----------------------------QVVQIACGRSHSMALTNVG 156
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---------EHAASGKDRPLLVR-QGSV- 280
+++ WG GQLGLGS TP PCL H + G D V G+V
Sbjct: 157 EIYCWGSNSHGQLGLGSS----GTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVY 212
Query: 281 ----NSSGKAGR-----------------SYVKEIACGGRHSAVVT 305
NS G+ G V I CG H+A +T
Sbjct: 213 GWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALT 258
Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 77/304 (25%), Positives = 119/304 (39%), Gaps = 46/304 (15%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITW 75
V+ WG G + E+S + +P ++ + K V CG ++A + G++ W
Sbjct: 105 VFAWGSNSNGQLGLNVEESMMPTP---KMVKSLATKQVVQIACGRSHSMALTNVGEIYCW 161
Query: 76 GSADDEGQSYLTSGKHGETPEPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
GS + GQ L G G TPE P L + + G +VT +G VY WG
Sbjct: 162 GS-NSHGQ--LGLGSSG-TPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWG-- 215
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
FG G D+T + PT+ +R T++ +
Sbjct: 216 --------KNSFGQLG--LGDTTDRPQ--PTQLKSLRFQRVTYIRCGMDHTAALTRDGGV 263
Query: 192 PASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGG 240
G + + P V G +T++ G HTL + G+++ +G GG
Sbjct: 264 FTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGG 323
Query: 241 EGQLGLGSRIKMVPTPHLI--PCLEHAASGKD-RPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLG S V +P L+ P S KD + L S+ ++ R V+ I CG
Sbjct: 324 SGQLGTKSTAN-VNSPQLVIGPWETSNNSIKDVKDLATETAEALSAIQSKRVVVRNIFCG 382
Query: 298 GRHS 301
G S
Sbjct: 383 GDQS 386
>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Megachile rotundata]
Length = 864
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 90/250 (36%), Gaps = 81/250 (32%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G +LA G + WGS + EGQ L G +P + V + +AG+ H
Sbjct: 222 AAGSHHSLALISDGGVFAWGS-NLEGQLGLPDVS-GLVNKPTKVHIPEPVKQISAGYYHS 279
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+G VY G E S K+ D +F T KQ LP+
Sbjct: 280 AFLTESGLVYICGESE---SGKLGIDV----NFSTQITPKQMQLPS-------------- 318
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
P V VA GG HT++L++ G ++
Sbjct: 319 ---------------------------------PAVH---VACGGHHTVVLAENGNIYCT 342
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G GQLGLG+ + + TP L+ S G + I+C
Sbjct: 343 GSNSNGQLGLGTNVTELHTPKLL----------------------SRGMLQNETISRISC 380
Query: 297 GGRHSAVVTD 306
G H+A+VT+
Sbjct: 381 GESHTAIVTE 390
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 25/121 (20%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHAA 266
G KI ++AAG H+L L G V+ WG EGQLGL +V P + P + +A
Sbjct: 215 GSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEPVKQISA 274
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGR----------------SYVKEIACGGRHSAVVT 305
L G V + SGK G S +ACGG H+ V+
Sbjct: 275 GYYHSAFLTESGLVYICGESESGKLGIDVNFSTQITPKQMQLPSPAVHVACGGHHTVVLA 334
Query: 306 D 306
+
Sbjct: 335 E 335
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 31/224 (13%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G +AT++ G++ WG G S L +G HG TP
Sbjct: 71 LCGKKIISLSYGTGPHVVIATAD-GEVYAWGH---NGYSQLGNGTTNHGLTPALVSTNLI 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V + + G H +++T GEVY WG + ++G ST Q
Sbjct: 127 GKRVTEVSCGSHHTIALTTDGEVYAWG-------------YNNSGQVGSGSTANQPTPRR 173
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGV 212
+ +K + + + + E G+ +PC + G+
Sbjct: 174 VSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGI 233
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPT 255
I +VA G HTL L+D G V+ WG GQLG G++ + VPT
Sbjct: 234 NIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAVPT 277
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 201 LSPCLVTLN-PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N G ++T+V+ G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 LTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLEH 264
CL++
Sbjct: 175 SSCLQN 180
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WGY G S P P R+ K V CG ++A ++G+ WG
Sbjct: 149 VYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP ++++ A G+AH +++T+ G VY+WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S A+PT ++ TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKSNQAVPTLINMDKERMVEVAACHTSHTSAAKTQS 304
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + + G KI ++ G G H +I + G+V+ WG+ G QLG G+
Sbjct: 57 GDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGT----- 111
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H + P LV S N GK V E++CG H+ +T
Sbjct: 112 -TNHGLT-----------PALV---STNLIGKR----VTEVSCGSHHTIALT 144
>gi|296087557|emb|CBI34146.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 27/206 (13%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
A + A H ++TE+GE+YTWG + + + G K ALP
Sbjct: 86 NAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPV 145
Query: 163 EQAPPSDKRAGEEVVKR--RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A S V+ + + + + GD+ P + V+I ++A+G
Sbjct: 146 PVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASG 205
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
G H+L L+D G+V WGYG GQLG S I+ P +I L
Sbjct: 206 GYHSLALTDDGKVLSWGYGQHGQLG-HSSIENQKIPTVIEAL------------------ 246
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTD 306
+V IACGG SA +TD
Sbjct: 247 ------ADEHVIYIACGGSSSAAITD 266
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG F + ++ G+L WG A+ + G P+P P + +++ A+G H
Sbjct: 152 CGGF--FTMVLTQEGQLWNWG-ANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYH 208
Query: 116 CVSVTEAGEVYTWGW 130
+++T+ G+V +WG+
Sbjct: 209 SLALTDDGKVLSWGY 223
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 98/261 (37%), Gaps = 53/261 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
G ++A G + +WG +D GQ L G + P P L ASVV
Sbjct: 28 GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
A S E ++Y+WGW DFG G F + Q
Sbjct: 85 ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 133
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D V S R ++ G+ +L P + GV++ +AAG HT
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 193
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+++ G ++GWG+G G LGLG R DR + + SVN
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 231
Query: 285 KAGRSYVKEIACGGRHSAVVT 305
G+ V +ACG RH+ V+
Sbjct: 232 --GQKMVL-VACGWRHTITVS 249
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 77/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+ +G
Sbjct: 195 AVTEDGDLYGWGWGR-YGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 253
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 254 IYTYGWSK----------YGQLGH----GDFEDHLVPHKLEALKDTTISQISGGWRHTMA 299
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + GD SP V K+ +VA G RHTL L++ V+
Sbjct: 300 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVF 359
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG G + P +I L
Sbjct: 360 SWGRGTSGQLGHGEIVDR-NIPKMIDAL 386
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P E VV+ A GW H +
Sbjct: 292 GGWRHTMALAADGKLYGWG-WNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 350
Query: 118 SVTEAGEVYTWG 129
++TEA V++WG
Sbjct: 351 ALTEAKNVFSWG 362
>gi|359476350|ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 564
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 104/279 (37%), Gaps = 58/279 (20%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-----------ASVVKAAA 111
+L + G++ +WG ++ G E E FP+P + V AA
Sbjct: 27 SLVLTGDGRVYSWGRG-----TFGRLGTGSEADELFPVPIKFDSAEKSDSKGVKFVGIAA 81
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPS---------AKVTRDFGSAGSFQKDSTGKQSA--- 159
G H V++ + G V+ WG+ C+ S ++ GS GS +S K
Sbjct: 82 GAYHSVALADDGTVWCWGYNSCILSDDNCLVPHLLELFLGLGSLGSLTDESDTKNKTPLK 141
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ +A A + + + E S + + +P V G + KVA
Sbjct: 142 VNAVKAGGMMSLAIDNLGGLWMWGNVPESSPDKGEFSLVSSFTPIPVWDFHGHTVVKVAC 201
Query: 220 GGRHTLILSDMGQV--------WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
G H + L G+ + WG G GQLGLG + R
Sbjct: 202 GNEHVVALVSHGETYKGGDLICYSWGNNGHGQLGLGD-----------------TENRLR 244
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSYP 310
P +V+ ++ S + V E+ACG H+A++T P
Sbjct: 245 PEVVKTFNLESLWE-----VYEVACGAFHTALLTHKKRP 278
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDR 271
KI VAAG H+L+L+ G+V+ WG G G+LG GS ++ P P E + S +
Sbjct: 16 KIVSVAAGEAHSLVLTGDGRVYSWGRGTFGRLGTGSEADELFPVPIKFDSAEKSDSKGVK 75
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ + G+ +S A V C G +S +++D
Sbjct: 76 FVGIAAGAYHSVALADDGTV---WCWGYNSCILSD 107
>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
Length = 660
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 108/301 (35%), Gaps = 78/301 (25%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG---SADDEGQSYLTSGKHGETPEP 97
PI G ++ D CG ++A + G + TWG ++GQ L K E PE
Sbjct: 188 PIHQLTNKGVTYID-CGDF--HSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIPEQ 244
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
V+K + G H +++ + ++Y WG E G GS
Sbjct: 245 IQFFKNKKVIKVSCGQFHTMALIDDNQLYGWGAGE----------LGELGS--------- 285
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
G+ + + + + ++ P +I+ +
Sbjct: 286 ---------------GKVLYFLYLLIILILKKYITINKNNYYKKDP---------QISDI 321
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-----RIKMVPTPHLIPCLEHAASGKDRP 272
GG HTLIL ++G V+ GYG GQLGL + ++V T ++ AA
Sbjct: 322 KCGGHHTLILLNIGYVYSTGYGSYGQLGLKTTNNHCEFQLVWTLTKKKIIKIAAGWNHSL 381
Query: 273 LLVRQGSVNSSGK-----------------------AGRSYVKEIACGGRHSAVVTDMSY 309
+L V S G AG++ V EI+ GG HS + + +
Sbjct: 382 VLTDTNDVFSCGYNAWGQLGLGDEESRTLFTHISALAGKNVV-EISAGGSHSWAILEQQF 440
Query: 310 P 310
P
Sbjct: 441 P 441
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 91/254 (35%), Gaps = 73/254 (28%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG LA +E+ ++ WG G Y G+ G P P T V G H
Sbjct: 153 ACGDYHTLALTENDQVYAWG-----GTLYKKVGQRGGKPGPIHQLTNKGVTYIDCGDFHS 207
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V++T G++YTWG G FQ + + P E++
Sbjct: 208 VAITNQGDIYTWG---------------GGGQFQNKGQLGLGHMKDIEIP-------EQI 245
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+FF K+ KV+ G HT+ L D Q++GW
Sbjct: 246 --------------------QFF----------KNKKVIKVSCGQFHTMALIDDNQLYGW 275
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS-YVKEIA 295
G G G+LG G + + +L + ++N + + + +I
Sbjct: 276 GAGELGELGSGK-------------VLYFLYLLIILILKKYITINKNNYYKKDPQISDIK 322
Query: 296 CGGRHSAVVTDMSY 309
CGG H+ ++ ++ Y
Sbjct: 323 CGGHHTLILLNIGY 336
>gi|302799471|ref|XP_002981494.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
gi|300150660|gb|EFJ17309.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
Length = 420
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 43 PARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPL 100
P R+ G +S + G G ++A E G L +WGS+ GQ L G P+
Sbjct: 99 PQRVRGMESTRVRAAAGSGVVSMAICEDGSLWSWGSSK-RGQLGLGLGVTRSLLPQKIHA 157
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
SV++ + GW H ++ T GE+++WG+ D G G L
Sbjct: 158 LAGKSVLQVSLGWGHALACTMDGELFSWGY----------HDSGRLGYL----------L 197
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
P +Q PS + + + R + P LV L KI +VA G
Sbjct: 198 PQDQ--PSMIQPSKNTLDRNDVGEKMLMEQLRKEDAPILQWEPKLVELPEPCKIIQVACG 255
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLG 245
H+L LS+ G ++ +G QLG
Sbjct: 256 LDHSLALSESGLLFSFGDNSTDQLG 280
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 86/234 (36%), Gaps = 87/234 (37%)
Query: 59 GCGFALATSESGKLITWG--SADDEGQSYLTSGKHGETPEPFPLPTEA-------SVVKA 109
G +LA SESG L ++G S D G+ E E P+ + VV
Sbjct: 255 GLDHSLALSESGLLFSFGDNSTDQLGR---------EITEDSPIISRVGGDLEGKQVVAI 305
Query: 110 AAGWAHCVSVTEAGEV-YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AGW H ++V YTWGW S+G Q
Sbjct: 306 GAGWGHSLAVERCSRAAYTWGW----------------------SSGSQLG--------- 334
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
R+G V ++ EE ++P + VA G H+L L+
Sbjct: 335 --RSGPSSVPKKL-----EELDDP---------------------VVSVAGGRVHSLALT 366
Query: 229 DMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS------GKDRPLLV 275
QVW WG G G+LGLG SR + +P L+ LE A G D LL+
Sbjct: 367 SKHQVWTWGCGRNGRLGLGSSRDENLPV--LVDSLEEHAEVIDVCCGYDHSLLL 418
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
I +VA G H+L L+ G++W WG EGQLG G +
Sbjct: 54 IARVACGHYHSLALTQSGELWAWGRNNEGQLGRGEK 89
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 98/261 (37%), Gaps = 53/261 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--------ASVVKAA 110
G ++A G + +WG +D GQ L G + P P L ASVV
Sbjct: 28 GASHSVALLSGGVVCSWGRGED-GQ--LGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQ 164
A S E ++Y+WGW DFG G F + Q
Sbjct: 85 ADHTTAYSDEEL-QLYSWGWG----------DFGRLGHGNSSDVFNPQPIQALQGVRITQ 133
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
D V S R ++ G+ +L P + GV++ +AAG HT
Sbjct: 134 IACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHT 193
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+++ G ++GWG+G G LGLG R DR + + SVN
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDR-------------------DDRLIPEKVSSVN--- 231
Query: 285 KAGRSYVKEIACGGRHSAVVT 305
G+ V +ACG RH+ V+
Sbjct: 232 --GQKMVL-VACGWRHTITVS 249
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 77/211 (36%), Gaps = 17/211 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE +V A GW H ++V+ +G
Sbjct: 195 AVTEDGDLYGWGWGR-YGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 253
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP--------PSDKRAGEEV 176
+YT+GW + DF K K + + E+A R G +
Sbjct: 254 IYTYGWSKYGQLGH--GDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGI 311
Query: 177 -----VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + GD SP V K+ +VA G RHTL L++
Sbjct: 312 QWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAK 371
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V+ WG G GQLG G + P +I L
Sbjct: 372 NVFSWGRGTSGQLGHGEIVDR-NIPKMIDAL 401
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GGG +ALA GKL WG + GQ + + +P P E VV+ A GW H
Sbjct: 307 VGGGIQWALAAD--GKLYGWG-WNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRH 363
Query: 116 CVSVTEAGEVYTWG 129
+++TEA V++WG
Sbjct: 364 TLALTEAKNVFSWG 377
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 106/300 (35%), Gaps = 58/300 (19%)
Query: 22 VYMWGYLPGT-----SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
VY WG GT E+ P SP G K +C G G +A + SG++ +WG
Sbjct: 161 VYTWG--EGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGS-GHTMALAVSGEVYSWG 217
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+ TP + A H V+V + GE Y WG
Sbjct: 218 LGLGGRLGQGRE-RDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGR------ 270
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG- 195
G GS + G + PT+ KR T E E A G
Sbjct: 271 -------GIDGSLGVE--GDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGN 321
Query: 196 DEFFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
+E L P LVT P +I ++A G H + LS+ G+++ WG GQLG+
Sbjct: 322 NEHGQLGIGSNEAMSEPTLVTNLPE-RIVRIACGNSHAVALSETGRLYAWGAHSSGQLGV 380
Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G PL R V R V + ACGG H+ ++++
Sbjct: 381 GE-----------------------PLEDRLSPVRVESNVVRDDVADFACGGNHTIILSN 417
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 105/286 (36%), Gaps = 71/286 (24%)
Query: 43 PARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P RL G + D+ C ++A +++G+ WG D G + KH +P
Sbjct: 235 PLRLAGLRGF-DITHIACNENHSVAVADNGEAYVWGRGID-GSLGVEGDKH-VSPTQIHA 291
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE-------------------CVPSAKVTR 141
VV AA G A + V E+GEVY G E +P V
Sbjct: 292 LDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPTLVTNLPERIVRI 351
Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
G++ + TG+ A + GE + R S R ES N D
Sbjct: 352 ACGNSHAVALSETGRLYAWGAHSS--GQLGVGEPLEDR--LSPVRVES-NVVRDD----- 401
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIP 260
+ A GG HT+ILS+ G ++ +G G +GQLGLG K TP +P
Sbjct: 402 ------------VADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATPAALP 449
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
E GR Y I+CG SA V+D
Sbjct: 450 NPE-----------------------GRKYTA-ISCGQDISAAVSD 471
>gi|301097379|ref|XP_002897784.1| regulator of chromosome condensation (RCC1), putative [Phytophthora
infestans T30-4]
gi|262106532|gb|EEY64584.1| regulator of chromosome condensation (RCC1), putative [Phytophthora
infestans T30-4]
Length = 1396
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 77/215 (35%), Gaps = 33/215 (15%)
Query: 43 PARLCGG----DSWKDVCGGGCGFALATSESGK-LITWGSA-----DDEGQSYLTSGKHG 92
P RL G ++ FAL + G L WG D E S
Sbjct: 412 PVRLIGAFVTLNAKLRTLAASSTFALGVQDDGHSLFAWGRCLPRIYDQEAASESEVCLLQ 471
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
TP + A V + A G H + +T+ G V++WG+ D G G +
Sbjct: 472 ATPRQLHIRLAAPVTEVACGLRHALVLTQDGVVHSWGFN----------DHGQLGHGSAE 521
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+ +++ A D+R+GEE E AS + C +
Sbjct: 522 TVAARTSGRVRYASYYDQRSGEE-------------EEYLASPTKLLYFEGCAAQQADPI 568
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+ V G + + LS G V+ WG EGQLG G
Sbjct: 569 PVAHVCCGDYYCMALSRAGDVFTWGEASEGQLGHG 603
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+P + + +T+VA G RH L+L+ G V WG+ GQLG GS
Sbjct: 473 TPRQLHIRLAAPVTEVACGLRHALVLTQDGVVHSWGFNDHGQLGHGS 519
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
F CL TL GV++ +++ G H+L ++ G+V+ WG G GQLG
Sbjct: 1272 FVAQPTCLPTL-VGVEMKQLSCGDAHSLAVTKHGRVFSWGRGTRGQLG 1318
>gi|401413326|ref|XP_003886110.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
gi|325120530|emb|CBZ56084.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
Length = 717
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 76/192 (39%), Gaps = 39/192 (20%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E E F T VV+ A G +HC ++TE GEVYTWG + D+G G
Sbjct: 482 EGEEAFRERTPKKVVQVACGSSHCAALTENGEVYTWG----------SDDYGQLG----- 526
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRK-------TSSARE-------ESENPASGDEF 198
GK+S D A ++VV R T+S E +G
Sbjct: 527 -LGKESRF-VLSPRRVDTLADKKVVSVRCGHFFTCCTTSTGEVFVWGYGRDGECGNGRSD 584
Query: 199 FTLSPCLVTLNPGV--------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
L + TL P K+ AGG H ++ G +W WG G EGQLG G I
Sbjct: 585 AALPVLISTLEPQPGGRKRGRGKVVDTVAGGGHLAAWTEEGGLWMWGRGREGQLGRGDAI 644
Query: 251 KMVPTPHLIPCL 262
+ V +P L
Sbjct: 645 ESVAASRDVPQL 656
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 71/184 (38%), Gaps = 32/184 (17%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVKAAAGWAHCVSVTEA 122
+S S L +WGS D S TP+ P L + + AAG H V T
Sbjct: 174 SSGSRVLYSWGSGIDGQLGLGGSILSVSTPQRVPASALHDGECISQCAAGAFHSVCCTSL 233
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V+TWG G D P + AP S +G++ ++
Sbjct: 234 GRVFTWG-------------RGGKNRLGHD-------WPRD-APSSAVSSGDKPLRSSTL 272
Query: 183 SSAREESENPASGDEFFTLSPCLVTL-NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
SS E+ TL C+ L ++ VA G HTL L++ G+V+ WG
Sbjct: 273 SSGVAETA-------VQTLPKCVEGLWRVSARVVAVACGEDHTLALTESGEVYSWGGNAH 325
Query: 242 GQLG 245
G+ G
Sbjct: 326 GECG 329
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P +V G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4341
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P +V G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4029 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4087
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4088 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4129
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4130 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4178
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4179 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4232
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4143 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4200
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4201 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4243
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4244 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4300
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4301 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4350
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P +V G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4341
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 94/250 (37%), Gaps = 39/250 (15%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F++A +ESG L WG + + H P+ SVV+ A G HC+++TE
Sbjct: 92 FSIAIAESGLLFGWGRSLNGELMCKQDSLH--EPKLLDKIMHWSVVQVACGAQHCIALTE 149
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS----FQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
G + +WG + G S + +A P Q +G
Sbjct: 150 EGTILSWG-------SNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSP 202
Query: 178 KRRKTSSAREESENPASGD-EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + G+ + F SP LV ++ VA G H++ + G V+ W
Sbjct: 203 SGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSW 262
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIAC 296
G+GG GQLG S A + + ++ G+ V +I C
Sbjct: 263 GHGGNGQLGHNSM---------------ANVTQPKKIMELMGTT----------VCQICC 297
Query: 297 GGRHSAVVTD 306
G RH+ +TD
Sbjct: 298 GRRHTISLTD 307
>gi|427795769|gb|JAA63336.1| Putative e3 ubiquitin-protein ligase herc2, partial [Rhipicephalus
pulchellus]
Length = 561
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 30/168 (17%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V + A G H +++T G+VY WG C G GS G + PT +
Sbjct: 160 VAQVACGSHHSLALTTNGDVYAWGQNNC----------GQVGS------GSTTNQPTPRK 203
Query: 166 PPSD---KRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGV 212
S +R + + + E E G+ SPC VT GV
Sbjct: 204 VSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGV 263
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
I KV G HT+ LSD G ++ WG GQLG G++ V +P +P
Sbjct: 264 VIHKVVCGYAHTMALSDEGVLYTWGANSYGQLGTGNKANQV-SPFKMP 310
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
VY WG G S P P ++ G + G CG ++A E+G++ WG
Sbjct: 179 VYAWGQNNCGQVGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGY- 237
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
G L G + P + VV K G+AH +++++ G +YTWG
Sbjct: 238 --NGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWG 288
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
++ +VA G H+L L+ G V+ WG GQ+G GS PTP
Sbjct: 159 RVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTTNQ-PTP 201
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 99/269 (36%), Gaps = 79/269 (29%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K TP +V+AA G HC++V +
Sbjct: 52 SLAICEDGQLFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQ 111
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G+ Y WG E +G G P K G +V++R
Sbjct: 112 GQAYAWGGNE----------YGQCGE-----------------EPERKEDGSKVLRRDIA 144
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
R P +++ +VAAGG H+++L+ G VW W G
Sbjct: 145 IPQR---------------------CAPQLRVRQVAAGGTHSVVLTHNGHVWTW-----G 178
Query: 243 QLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPL-LVRQGSV-----NSSGKAG------ 287
Q IK + TP + LE+ A G L L+ +G V N G+ G
Sbjct: 179 QPWPPGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQP 238
Query: 288 RS-----------YVKEIACGGRHSAVVT 305
RS + +IA GG HS +T
Sbjct: 239 RSQPVPVQGLSGLILADIAAGGWHSTALT 267
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 43/269 (15%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
IP R + V GG ++ + +G + TWG G + P +
Sbjct: 145 IPQRCAPQLRVRQVAAGGT-HSVVLTHNGHVWTWGQP-------WPPGDIKQISTPVRVQ 196
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+V A G H +++ E GEV+ WG ++G G+ D+ + +P
Sbjct: 197 GLENVQLIAVGAFHNLALLEEGEVWAWG----------NNEYGQLGT--GDTQPRSQPVP 244
Query: 162 TEQAP---PSDKRAGEEVVKRRKTSS-----AREESENPASGDEFFT-LSPCLVTLNPGV 212
+ +D AG T + R E GD+ + + P V L G
Sbjct: 245 VQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGE 304
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
I +V+ GG H++ + G+++ +G G+LG G + V T H + + P
Sbjct: 305 TIAQVSCGGTHSVARTADGRIFSYGRADHGRLGYGRK---VTTGHPM----------EVP 351
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
+ +R N++ +G +VK +ACGGRH+
Sbjct: 352 IGIRPPK-NAAENSGCWFVKLVACGGRHT 379
>gi|26353714|dbj|BAC40487.1| unnamed protein product [Mus musculus]
Length = 377
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSLYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K + QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLE 263
+ ++ P L+ L+
Sbjct: 197 T-LEAELEPRLLEALQ 211
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVT 305
E G L V + A + + + +CG RH+AVVT
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVT 317
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ ++AAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQA------------SPQLIKSLLGIPFMQIAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V +IACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P +V G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4341
>gi|145540984|ref|XP_001456181.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423991|emb|CAK88784.1| unnamed protein product [Paramecium tetraurelia]
Length = 1005
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 57/236 (24%), Positives = 93/236 (39%), Gaps = 27/236 (11%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG+ +A S GK+ WG+ +D + K+ + P + + + G H
Sbjct: 681 ACGYKHTMAISNMGKVYCWGNNEDGKCGKQSVIKYVDYPHL--IESSFDCISIECGHDHS 738
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRAG 173
V V G VY+WG E G ++T + +P + P + G
Sbjct: 739 VYVNSKGGVYSWGCGE--------------GGLLGNNTVISTHIPQQVMIPGPCKQMKCG 784
Query: 174 ----EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+V+ R R + E + + T + VA G HT+IL+
Sbjct: 785 GLHNAAIVEDRLYVWGRGDGGQLGLPLEL-GMEIAIPTKVEVENVQAVACGDAHTIILNS 843
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPH-LIPCLEHAASGKDRPLLVRQGSVNSSG 284
QV+GWGY +GQLGL I V P LI ++ +G + ++ G++ G
Sbjct: 844 QKQVYGWGYNEQGQLGLSLDITSVVQPTLLIEDVDQIYAGSLQSYFLKDGNLYGCG 899
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP----C 261
++L V K+A G +HT+ +S+MG+V+ WG +G+ G S IK V PHLI C
Sbjct: 669 ISLKSDVMFVKMACGYKHTMAISNMGKVYCWGNNEDGKCGKQSVIKYVDYPHLIESSFDC 728
Query: 262 LEHAASGKDRPLLVR-QGSVNS-----SGKAGRSYV---------------KEIACGGRH 300
+ G D + V +G V S G G + V K++ CGG H
Sbjct: 729 IS-IECGHDHSVYVNSKGGVYSWGCGEGGLLGNNTVISTHIPQQVMIPGPCKQMKCGGLH 787
Query: 301 -SAVVTDMSYPIAR 313
+A+V D Y R
Sbjct: 788 NAAIVEDRLYVWGR 801
>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 383
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 79/200 (39%), Gaps = 12/200 (6%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVS 118
++A + G + TWG + G T E P + S + A H +
Sbjct: 95 SVALTHQGDVFTWGYG-----GFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAA 149
Query: 119 VTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+GE+Y WG E R G S K +P
Sbjct: 150 ITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALT 209
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + + + GD P V GV+IT++A GG H+L L++ G+V W
Sbjct: 210 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 269
Query: 237 GYGGEGQLGLGS-RIKMVPT 255
G+GG GQLG S R + VPT
Sbjct: 270 GHGGHGQLGSSSLRNQKVPT 289
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 108/287 (37%), Gaps = 52/287 (18%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHG 92
++S L+ P R+ DS G CG F + G L WG D G+
Sbjct: 14 DQSFSLAQTPGRI-DADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDG-GRLGFGQENSV 71
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVT 140
P PL E S+ A G H V++T G+V+TWG+ RE VP +
Sbjct: 72 FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVP--RRV 129
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
D ++G +A TE +GE + R+ R +E
Sbjct: 130 DDSWDCKISAIATSGTHTAAITE--------SGELYMWGREEGDGRLGLGPGRGPNEGGG 181
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
LS V + V+ GG T+ L+ GQ+W WG +LG G + P P +
Sbjct: 182 LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP--V 239
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE VR + +IACGG HS +T+
Sbjct: 240 PSLEG----------VR--------------ITQIACGGYHSLALTE 262
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 79/200 (39%), Gaps = 12/200 (6%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVS 118
++A + G + TWG + G T E P + S + A H +
Sbjct: 164 SVALTHQGDVFTWGYG-----GFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAA 218
Query: 119 VTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+GE+Y WG E R G S K +P
Sbjct: 219 ITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALT 278
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + + + GD P V GV+IT++A GG H+L L++ G+V W
Sbjct: 279 KEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSW 338
Query: 237 GYGGEGQLGLGS-RIKMVPT 255
G+GG GQLG S R + VPT
Sbjct: 339 GHGGHGQLGSSSLRNQKVPT 358
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 108/287 (37%), Gaps = 52/287 (18%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHG 92
++S L+ P R+ DS G CG F + G L WG D G+
Sbjct: 83 DQSFSLAQTPGRI-DADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDG-GRLGFGQENSV 140
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVT 140
P PL E S+ A G H V++T G+V+TWG+ RE VP +
Sbjct: 141 FVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVP--RRV 198
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
D ++G +A TE +GE + R+ R +E
Sbjct: 199 DDSWDCKISAIATSGTHTAAITE--------SGELYMWGREEGDGRLGLGPGRGPNEGGG 250
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI 259
LS V + V+ GG T+ L+ GQ+W WG +LG G + P P +
Sbjct: 251 LSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP--V 308
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LE VR + +IACGG HS +T+
Sbjct: 309 PSLEG----------VR--------------ITQIACGGYHSLALTE 331
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGW 113
CGG F +A ++ G+L WG+ + L G + EP P+P+ + + A G
Sbjct: 269 CGGF--FTMALTKEGQLWNWGANSNY---ELGRGDNLGGWEPMPVPSLEGVRITQIACGG 323
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++TE G+V +WG G G S Q +PTE +DK
Sbjct: 324 YHSLALTEEGKVLSWG-------------HGGHGQLGSSSLRNQK-VPTEIEALADK--- 366
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
KI +A+GG + ++D G++
Sbjct: 367 ---------------------------------------KIVFIASGGSSSAAITDGGEL 387
Query: 234 WGWGYGGEGQLGLGSRIKMVPTP 256
W WG + QLG+ ++ TP
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTP 410
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 42/244 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G +A + +WG +D GQ HG+T + LPT+ S +V G
Sbjct: 20 GASHTVALLTGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTKLSAFDGQDIVSVTCG 72
Query: 113 WAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
+ V+ +++G +VY+WGW DFG G F L +Q
Sbjct: 73 ADYTVARSKSGKDVYSWGWG----------DFGRLGHGDPSDLFIPHPIRALQGLRIKQI 122
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D ++ + S R ++ G + P + G++I VAAG H++
Sbjct: 123 SCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSV 182
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SV 280
+++ G ++GWG+G G LGLG LIP E D+ ++V G S+
Sbjct: 183 AITEDGDLYGWGWGRYGNLGLGD-----TNDRLIP--EKVNIDGDKIVMVSCGWRHTISI 235
Query: 281 NSSG 284
+SSG
Sbjct: 236 SSSG 239
>gi|302760337|ref|XP_002963591.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
gi|300168859|gb|EFJ35462.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
Length = 420
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 43 PARLCGGDSWKDVCGGGCGF-ALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPL 100
P R+ G +S + G G ++A E G L +WGS+ GQ L G P+
Sbjct: 99 PQRVRGMESTRVRAAAGSGVVSMAICEDGSLWSWGSSK-RGQLGLGLGVTSSLLPQKIHA 157
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
SV++ + GW H ++ T GE+++WG+ D G G L
Sbjct: 158 LAGKSVLQVSLGWGHALACTMDGELFSWGY----------HDSGRLGYL----------L 197
Query: 161 PTEQA----PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
P +Q P D +V ++ R+E P LV L KI +
Sbjct: 198 PQDQTLMIQPSKDSLDHNDVGEKMLMEQLRKEDA------PILQWEPKLVKLPEPSKIVQ 251
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
VA G H+L LS+ G ++ +G QLG
Sbjct: 252 VACGLDHSLALSESGLLFSFGDNSTAQLG 280
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 86/232 (37%), Gaps = 83/232 (35%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-------SVVKAAA 111
G +LA SESG L ++G D + L ET E P+ + VV A
Sbjct: 255 GLDHSLALSESGLLFSFG---DNSTAQLGR----ETTEDSPIISRVGGDLEGKQVVAIGA 307
Query: 112 GWAHCVSVTEAGEV-YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
GW H ++V YTWGW S+G Q
Sbjct: 308 GWGHSLAVERCSRAAYTWGW----------------------SSGSQLG----------- 334
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+G V ++ EE ++P + VA G H+L L+
Sbjct: 335 RSGPSSVPKQL-----EELDDP---------------------VVSVAGGRVHSLALTSK 368
Query: 231 GQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS------GKDRPLLV 275
QVW WG G G+LGLG SR + +P L+ LE A G D LL+
Sbjct: 369 HQVWTWGCGRNGRLGLGSSRDENLPV--LVESLEEHAEVIDVCCGYDHSLLL 418
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
PG+ I +VA G H+L LS G++W WG EGQLG G +
Sbjct: 48 PGLPPSIARVACGHYHSLALSRSGELWAWGRNNEGQLGRGEK 89
>gi|289666776|ref|NP_775621.2| RCC1 domain-containing protein 1 [Mus musculus]
gi|190360158|sp|Q8BTU7.2|RCCD1_MOUSE RecName: Full=RCC1 domain-containing protein 1
Length = 377
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K + QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLE 263
+ ++ P L+ L+
Sbjct: 197 T-LEAELEPRLLEALQ 211
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVT 305
E G L V + A + + + +CG RH+AVVT
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVT 317
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 100/252 (39%), Gaps = 26/252 (10%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG A A + +G+L +WGS + EGQ L T K+ P+ + A G H
Sbjct: 170 ACGMKHAFALTNNGELYSWGS-NSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYH 228
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-APPSDKRAGE 174
++++++G V+ WG FG G L T Q A GE
Sbjct: 229 SIAISKSGAVFGWG----------KNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGE 278
Query: 175 E-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL-S 228
E V + G + P V G +T+++ G RHTL L
Sbjct: 279 EFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVP 338
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+V+ WG GG GQLG S + V TP ++ A +G + +Q + + G
Sbjct: 339 SRGRVYAWGLGGAGQLGNHS-TRSVTTPQVVHGPWIAPNGSTIMDVNKQFNSRTIG---- 393
Query: 289 SYVKEIACGGRH 300
VK I GG H
Sbjct: 394 YIVKHIFTGGDH 405
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 27/104 (25%)
Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ L PG+ K A G HTL +++ GQ++ WG EGQLGL S+ M +P ++ L
Sbjct: 102 LQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTL 161
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G S V +IACG +H+ +T+
Sbjct: 162 ------------------------GTSVVVQIACGMKHAFALTN 181
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 73/192 (38%), Gaps = 59/192 (30%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWA 114
CG LA +E G+L +WGS + EGQ L S E+ P + VV+ A G
Sbjct: 116 AACGAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMK 174
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H ++T GE+Y S+ +S G Q L T
Sbjct: 175 HAFALTNNGELY---------------------SWGSNSEG-QLGLGT------------ 200
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
D + + P ++ G+ I +A GG H++ +S G V+
Sbjct: 201 ---------------------DTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVF 239
Query: 235 GWGYGGEGQLGL 246
GWG GQLGL
Sbjct: 240 GWGKNTFGQLGL 251
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 41/183 (22%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------ 148
P A + + A G + V +T+ GE+Y+ G D+G G
Sbjct: 52 PRELDFKKAAEIQQIACGENYTVVITQIGEIYSCG----------NNDYGQLGHEKGRKR 101
Query: 149 -----------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
F+K + G L + + + + E + +
Sbjct: 102 LQLIPGLDAFVFKKAACGAYHTLAINEW------------GQLFSWGSNTEGQLGLNSKN 149
Query: 198 FFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
F SP +V TL V + ++A G +H L++ G+++ WG EGQLGLG+ K P
Sbjct: 150 FMESSPRMVKTLGTSV-VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKP 208
Query: 257 HLI 259
I
Sbjct: 209 KFI 211
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 92/251 (36%), Gaps = 38/251 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVS 118
++A + G + TWG + G T E P + S + A H +
Sbjct: 164 SVALTHQGDVFTWGYG-----GFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAA 218
Query: 119 VTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+TE+GE+Y WG E R G S K +P
Sbjct: 219 ITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALT 278
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ + + + GD P V V+IT++A GG H+L L+ G+V W
Sbjct: 279 KEGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLSW 338
Query: 237 GYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
G+GG GQLG S R + +PT +E A K + IA
Sbjct: 339 GHGGHGQLGNSSLRNQKIPTE-----IEALADKK---------------------IVFIA 372
Query: 296 CGGRHSAVVTD 306
CGG SA +TD
Sbjct: 373 CGGSSSAAITD 383
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAGW 113
CGG F +A ++ G+L WG+ + L G + EP P+P+ SV + A G
Sbjct: 269 CGGF--FTMALTKEGQLWNWGANSNY---ELGRGDNLGGWEPLPVPSLDSVRITQIACGG 323
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++T+ G+V +WG G G S Q +PTE +DK
Sbjct: 324 YHSLALTKEGKVLSWG-------------HGGHGQLGNSSLRNQK-IPTEIEALADK--- 366
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
KI +A GG + ++D G++
Sbjct: 367 ---------------------------------------KIVFIACGGSSSAAITDGGEL 387
Query: 234 WGWGYGGEGQLGLGSRIKMVPTP 256
W WG + QLG+ ++ TP
Sbjct: 388 WMWGNAKDFQLGVPGLPEIQTTP 410
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G E P L L I +A GG H++ L+ G V+ WGYGG G LG V
Sbjct: 135 GQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALG-----HKVY 189
Query: 255 TPHLIP-CLE 263
T L+P C++
Sbjct: 190 TRELVPRCVD 199
>gi|443897037|dbj|GAC74379.1| hypothetical protein PANT_11d00031 [Pseudozyma antarctica T-34]
Length = 547
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 41/181 (22%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWR---EC-VPSAKVTRDFG--SAGSFQKD------- 152
VV AA G +H + +T G VY+ G +C P ++ F G+F K+
Sbjct: 134 VVAAACGRSHTLLITAGGSVYSAGLNTSGQCGHPESQTVPLFTRIETGAFIKERDPVVAA 193
Query: 153 -----------STGKQSAL-PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
+GK + +E+ + R GE + + F T
Sbjct: 194 SCGLTFSMLLTQSGKLYTMGSSEKGQLGNGRTGEHFTSNNRLA--------------FNT 239
Query: 201 LS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
S P LV IT +A G +H++ L D G V+ WG+GG G+LGLGS+ + TP L+
Sbjct: 240 FSEPFLVKQLADKNITSIACGQQHSIALDDQGYVYVWGFGGYGRLGLGSQQDQL-TPTLV 298
Query: 260 P 260
P
Sbjct: 299 P 299
>gi|388582263|gb|EIM22568.1| RCC1/BLIP-II [Wallemia sebi CBS 633.66]
Length = 581
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 87/222 (39%), Gaps = 45/222 (20%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEA---------S 105
G G + A + G + WG + Q+ ++ + G E P P +A
Sbjct: 303 VGTGSYHSFAIDKDGVVFGWG-LNKMRQTGVSDERDGYEDTIAVPTPIDALHPDNHDGSR 361
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V++ + G H + + + GEV WG C G KD + L +
Sbjct: 362 VIQISGGEHHTLFLFDNGEV--WGCGRC---------DGKELGLSKDHPAYKEILENNEK 410
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP--------------- 210
+ R EE K++ TS EE+E P + + F P + P
Sbjct: 411 TAQEAR--EEKAKKQGTSI--EETEAPKTIADEFVEQPVRIQFPPPPTEDEPNPENTPYE 466
Query: 211 ----GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
KI +++AG RH L +SD G V+ WGYG QLG G+
Sbjct: 467 SGSSKTKIKQISAGLRHNLAVSDQGYVYSWGYGNACQLGQGN 508
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 92/242 (38%), Gaps = 55/242 (22%)
Query: 39 LSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----- 92
L +P ++ G D ++ V G +LA E G++ WGS + G+ G
Sbjct: 174 LETVPMKVDGLDDFRAVNIAAGDYISLAIDEEGQMRAWGSFNSNDGLLGFDGRPGGARKQ 233
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG-------WRECVPSAKVT----- 140
P P + VV+A G H +++T +G VY WG R + K+
Sbjct: 234 VKPAVLPQLAKHRVVQAVCGADHALALTTSGIVYAWGNGQQQQLGRRVIERRKLNGLTPE 293
Query: 141 ----RDF-----GSAGSFQKDSTGKQ---SALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
R+ GS SF D G Q SD+R G E
Sbjct: 294 PLHIRNIVAVGTGSYHSFAIDKDGVVFGWGLNKMRQTGVSDERDGYE------------- 340
Query: 189 SENPASGDEFFTLSPCLVTLNP----GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
D +P + L+P G ++ +++ G HTL L D G+VWG G +L
Sbjct: 341 -------DTIAVPTP-IDALHPDNHDGSRVIQISGGEHHTLFLFDNGEVWGCGRCDGKEL 392
Query: 245 GL 246
GL
Sbjct: 393 GL 394
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 43/241 (17%)
Query: 63 ALATSESGKLI-TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAH 115
++ SG ++ +WG +D GQ HG+T + LPT+ S +V G +
Sbjct: 115 SIQNQVSGNVVCSWGRGED-GQL-----GHGDTDDRL-LPTKLSAFDGQDIVSVTCGADY 167
Query: 116 CVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPS 168
V+ +++G +VY+WGW DFG G F L +Q
Sbjct: 168 TVARSKSGKDVYSWGWG----------DFGRLGHGDPSDLFIPHPIRALQGLRIKQISCG 217
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
D ++ + S R ++ G + P + G++I VAAG H++ ++
Sbjct: 218 DCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAIT 277
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSS 283
+ G ++GWG+G G LGLG LIP E D+ ++V G S++SS
Sbjct: 278 EDGDLYGWGWGRYGNLGLGD-----TNDRLIP--EKVNIDGDKIVMVSCGWRHTISISSS 330
Query: 284 G 284
G
Sbjct: 331 G 331
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4005 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4063
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4064 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4105
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4106 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4154
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4155 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4208
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4119 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4176
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4177 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4219
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + G+
Sbjct: 4220 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGM 4276
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4277 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4326
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 463 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 517
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 518 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 561
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 562 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 621
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 622 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 657
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P + + GV I VA G HTL L+ G V+ WG EGQLGLG V P L+ L
Sbjct: 4294 PQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVL 4352
Query: 263 E 263
+
Sbjct: 4353 Q 4353
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 88/244 (36%), Gaps = 58/244 (23%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4022 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4080
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4081 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4122
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4123 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4171
Query: 203 -------PCLVTLNPGVKI----------TKVAAGGRHTLILS-DMGQVWGWGYGGEGQL 244
P VT G +I +VA G HTL +S D VW +G G G+L
Sbjct: 4172 NTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4231
Query: 245 GLGS 248
GLG+
Sbjct: 4232 GLGN 4235
>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
Length = 985
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 30/262 (11%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
S P L G + G +LA ++ G++ WGS + + E P+
Sbjct: 52 FSIYPVSLTSGVGIVQIAAGRAH-SLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRI 110
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR---ECVPSAKVTRDFGSAGSFQKDSTG 155
E VV+ A+G HC+++TE G VY WG + C+ ++
Sbjct: 111 NQLNE--VVQVASGSDHCIALTEDGRVYVWGEQADGRCIHHPELVEHL------------ 156
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+A+P + + + + S D S VT G+ +
Sbjct: 157 --NAIPIVRVEAGARHCVAISASGAVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLGVV 214
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGKD 270
+ A G HT++L+ G+ + +G GQ G G +++ P P + L A+G
Sbjct: 215 EAACGDNHTILLTHCGRTFSFGSDALGQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGAC 274
Query: 271 RPLLVRQGS-----VNSSGKAG 287
+ + +GS +NSSG+ G
Sbjct: 275 HTIAIIRGSPYPFGLNSSGQLG 296
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 17/122 (13%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
F++ P V+L GV I ++AAG H+L ++D G+V+ WG GQLG+ + I P
Sbjct: 52 FSIYP--VSLTSGVGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKR 109
Query: 259 IPCLE---HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR---HSAVVTDMS-YPI 311
I L ASG D + + + GR YV GR H +V ++ PI
Sbjct: 110 INQLNEVVQVASGSDHCIALTED--------GRVYVWGEQADGRCIHHPELVEHLNAIPI 161
Query: 312 AR 313
R
Sbjct: 162 VR 163
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 77/215 (35%), Gaps = 49/215 (22%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P L + +V+ AAG AH ++V + G V+ WG E G
Sbjct: 56 PVSLTSGVGIVQIAAGRAHSLAVADDGRVFAWGSNE------------------HGQLGM 97
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP------ASGDEFFTLSPCLVTLNP 210
++ + ++ P + E V + +E+ D P LV
Sbjct: 98 ENTITWQEMPKRINQLNEVVQVASGSDHCIALTEDGRVYVWGEQADGRCIHHPELVEHLN 157
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
+ I +V AG RH + +S G V+ WG G+LG+
Sbjct: 158 AIPIVRVEAGARHCVAISASGAVFTWGQNNSGELGMDDF--------------------- 196
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
RP Q SV+ + V E ACG H+ ++T
Sbjct: 197 RP----QTSVHHVTQMDGLGVVEAACGDNHTILLT 227
>gi|357601928|gb|EHJ63196.1| hypothetical protein KGM_14591 [Danaus plexippus]
Length = 375
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL---GSRIKMVPTPHLIPCLEHAAS 267
G+KI K+ AGG H+L LSD G ++ WG+ GQLG+ G + K + +P L
Sbjct: 236 GIKIVKIRAGGWHSLALSDCGDLYLWGWNDTGQLGMENKGGQEKKGLKNYTLPTLVDVYD 295
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
D+ + + VK+IACG RH+A++ +
Sbjct: 296 ENDQLVDLC--------------VKDIACGTRHTALLLE 320
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 59/201 (29%)
Query: 55 VCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA------SV 106
VC CG+ + ++ G++ TWG+ L G HG+ LPTE +
Sbjct: 187 VCDIVCGYEHYMLLTDEGRVYTWGNG-----RRLQLG-HGDLTN-LELPTEVEALAGIKI 239
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG-KQSALPTEQA 165
VK AG H +++++ G++Y WGW + T G ++ G K LPT
Sbjct: 240 VKIRAGGWHSLALSDCGDLYLWGWND-------TGQLGMENKGGQEKKGLKNYTLPT--- 289
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+E++ LV L + +A G RHT
Sbjct: 290 ----------------LVDVYDENDQ-------------LVDL----CVKDIACGTRHTA 316
Query: 226 ILSDMGQVWGWGYGGEGQLGL 246
+L + VW G GQLGL
Sbjct: 317 LLLEDNTVWTSGCNKYGQLGL 337
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4013 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4071
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4072 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4113
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4114 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4162
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4163 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN 4216
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4127 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4184
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4185 ACGLNHTLAVSVDGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4227
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4228 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4284
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4285 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4334
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 95/259 (36%), Gaps = 66/259 (25%)
Query: 22 VYMWG--------------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
VY+WG +P T+P S +CG + + G A
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPATAPS----FSQAQQVICGQNCTFVIQANGTVLACGEG 4052
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
G+L G++DD + S G +V + H +++TE+GEV++
Sbjct: 4053 SYGRL-GQGNSDDLHVLTVISALQGFVV--------TQLVTSCGSDGHSMALTESGEVFS 4103
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
WG D+G G D + + Q GEEVV + S +
Sbjct: 4104 WG----------DGDYGKLGHGNSDRQRRPRQIEALQ--------GEEVV---QMSCGFK 4142
Query: 188 ESENPASGDEFFTLS-----------------PCLVTLNPGVKITKVAAGGRHTLILS-D 229
S S + FT P VT G +I +VA G HTL +S D
Sbjct: 4143 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Query: 230 MGQVWGWGYGGEGQLGLGS 248
VW +G G G+LGLG+
Sbjct: 4203 GSMVWAFGDGDYGKLGLGN 4221
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4132 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4189
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4190 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4232
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4233 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4289
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4290 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4339
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 17/253 (6%)
Query: 18 KETVVYMWGYLPGTSPEKSP--ILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
K+ V++WG++ EK+ ILSP+P ++ + ++ GG + L + G + W
Sbjct: 460 KDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGG-LDYILVLRKDGNI--W 516
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
G +D T + L +V AAG+ H ++V G V++WG +
Sbjct: 517 GCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWG-DTNLD 575
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG 195
+ K +F K +G + + K+ G S +G
Sbjct: 576 NKKKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTV------WSWGYNAYGQLGNG 629
Query: 196 DEFFTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
+ P V LN + +AAG H++ L G VW WG GQLG I+
Sbjct: 630 TRETSFVPVRVKGLN---NVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGR-RNIEFST 685
Query: 255 TPHLIPCLEHAAS 267
P + L++ +
Sbjct: 686 VPLKVEKLDNVVA 698
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 89/234 (38%), Gaps = 46/234 (19%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA G + +WG A+++GQ L +G + + P + + V AG H ++
Sbjct: 401 GGSHTLAIKRDGTVWSWG-ANNKGQ--LGNGTYKSSYIPTCVKGLNNAVLVEAGSQHSLA 457
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDF----------------------------------- 143
V + G V+ WG+ E V S K T+D
Sbjct: 458 VDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWG 517
Query: 144 -GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD------ 196
G+ F+K + S++ + K + + R + + GD
Sbjct: 518 CGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNK 577
Query: 197 -EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
++ S V + + KVAAG H+L L G VW WGY GQLG G+R
Sbjct: 578 KKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTR 631
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 52/282 (18%)
Query: 18 KETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
++ V+ WGY G P + +S +P R+ G + GG ++A ++ G +
Sbjct: 209 RDGTVWSWGYNEDGELGNRPTEDYTVS-VPVRVKGLSDVIAISAGGF-HSIALNKDGAVW 266
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
WG E +GK + P + VV AAG+ H +++ + G V+ WG
Sbjct: 267 IWGGGIIE-----KNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWG---- 317
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE--- 190
+G GS + G+ S L + + A V R S A ++
Sbjct: 318 ------HNSYGVLGS----NVGEHSFLLVQVKGLKNVVA---VAAGRLHSVALTKNGTIW 364
Query: 191 ---NPASG-----DEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
N A G + F+L+ P V V +A GG HTL + G VW WG +
Sbjct: 365 AWGNNAFGQLGRENNSFSLNLPYKVKWLDNV--VAIATGGSHTLAIKRDGTVWSWGANNK 422
Query: 242 GQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
GQLG G+ + +PT C++ G + +LV GS +S
Sbjct: 423 GQLGNGTYKSSYIPT-----CVK----GLNNAVLVEAGSQHS 455
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 119/324 (36%), Gaps = 71/324 (21%)
Query: 18 KETVVYMWG-----------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
K+ V++WG Y T+P K L I A G D F+LA
Sbjct: 109 KDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWD-----------FSLAV 157
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
G + WG ++ G+ L G + P + VV +AG H +++ G V+
Sbjct: 158 GSDGSVWAWG-INNHGE--LGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLALKRDGTVW 214
Query: 127 TWGWRE--------------CVP-SAKVTRDFG--SAGSFQKDSTGKQSAL--------- 160
+WG+ E VP K D SAG F + K A+
Sbjct: 215 SWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGIIE 274
Query: 161 ----PTEQAPPSDKRAGEEVVK----RRKTSSAREESENPASGDEFFTL--------SPC 204
P R +VV R + + +++ G + + S
Sbjct: 275 KNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFL 334
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
LV + + VAAG H++ L+ G +W WG GQLG + + P+ + L++
Sbjct: 335 LVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDN 394
Query: 265 A---ASGKDRPLLV-RQGSVNSSG 284
A+G L + R G+V S G
Sbjct: 395 VVAIATGGSHTLAIKRDGTVWSWG 418
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 103/278 (37%), Gaps = 44/278 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G LA + G + WG G L +G + ++ P + VV +AG H
Sbjct: 48 GAGSLHTLAIKDDGTVWAWGY---NGFGQLGNGTYKDSCIPVRVKGLKDVVAVSAGTFHS 104
Query: 117 VSVTEAGEVYTWGWREC-VPSAKVTRDFGSAGSFQ--KDSTGKQSALPTEQAPPSDKRAG 173
+++ + G V+ WG + V RDF + + K+ + A SD
Sbjct: 105 LALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGSD---- 160
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN-PGVK-ITKVAAGGRHTLILSDMG 231
S N +L P V + G+K + V+AG H+L L G
Sbjct: 161 ---------GSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLALKRDG 211
Query: 232 QVWGWGYGGEGQLG----------LGSRIKMVPTPHLIPC--LEHAASGKDRPLLVRQGS 279
VW WGY +G+LG + R+K + I A KD + + G
Sbjct: 212 TVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGG 271
Query: 280 -VNSSGKAGRSY----------VKEIACGGRHSAVVTD 306
+ +GK SY V IA G RHS + D
Sbjct: 272 IIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKD 309
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
K+ AG HTL + D G VW WGY G GQLG G+
Sbjct: 43 KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGT 78
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 95/259 (36%), Gaps = 66/259 (25%)
Query: 22 VYMWG--------------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
VY+WG +P T+P S +CG + + G A
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPATAPS----FSQAQQVICGQNCTFVIQANGTVLACGEG 4052
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
G+L G++DD + S G +V + H +++TE+GEV++
Sbjct: 4053 SYGRL-GQGNSDDLHVLTVISALQGFVV--------TQLVTSCGSDGHSMALTESGEVFS 4103
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
WG D+G G D + + Q GEEVV + S +
Sbjct: 4104 WG----------DGDYGKLGHGNSDRQRRPRQIEALQ--------GEEVV---QMSCGFK 4142
Query: 188 ESENPASGDEFFTLS-----------------PCLVTLNPGVKITKVAAGGRHTLILS-D 229
S S + FT P VT G +I +VA G HTL +S D
Sbjct: 4143 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Query: 230 MGQVWGWGYGGEGQLGLGS 248
VW +G G G+LGLG+
Sbjct: 4203 GSMVWAFGDGDYGKLGLGN 4221
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4132 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4189
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4190 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4232
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4233 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4289
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4290 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4339
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA G + WG D L G + P + V AAG H ++V E G
Sbjct: 1167 LALRSDGTVWAWG---DNTFGQLGDGSNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDG 1223
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA--PPSDKRAGEE----VV 177
V+ WG+ FG G D T A+PT + AG E ++
Sbjct: 1224 TVWAWGYNV----------FGQLG----DGTMDARAVPTRMLGLDGAVAVAGGEYHSLML 1269
Query: 178 KRRKTSSAREESENPASGDEFFT--LSPC-LVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ T A + + G+ FT LSP +V L+ ++ V AGG H++ L + G VW
Sbjct: 1270 RFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVELD---QVRTVRAGGYHSVALREDGTVW 1326
Query: 235 GWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAAS 267
WG+ G+GQLG G+ + VP P +P L AS
Sbjct: 1327 TWGHNGQGQLGDGTVTTRRVPAP--VPGLTAIAS 1358
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 23/239 (9%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
PG SP + L+ + A G D F+LA G + WG+ G L
Sbjct: 188 PGPSPAQVVGLTGVVALAAGFD-----------FSLAVRSDGTVWAWGA---NGSGQLGD 233
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
G + + P + V AG H +++ G V+ WG + + G
Sbjct: 234 GTYIQRLAPTQVSQLQGVSAVTAGLYHALALRSDGTVWAWG-------SNSSGQMGDGTW 286
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
+ S + +++ +A + + AG V+ A + G SP V +
Sbjct: 287 TDRPSPVQVTSIARAKAVAA-QDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRV 345
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
+T +AAG +H ++L G +W WG+G GQLG GS +M+ +P ++ L + AS
Sbjct: 346 RGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERML-SPEVVTRLSNVAS 403
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 102/257 (39%), Gaps = 34/257 (13%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAH 115
GG ++A ++ G L WG G +Y G G TP +P + + A + H
Sbjct: 656 GGLYHSMALAQDGTLRAWG-----GNAYGQFGDGGVTPRVVAGAVPGLSGIKLLGASYLH 710
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------SD 169
++V E G + TWG+ FG G S+LP + S
Sbjct: 711 VLAVREDGMLLTWGYNR----------FGQLGL----GAAGWSSLPVQVRGLGQGRRLSA 756
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLIL 227
RA +V+ T A ++ + GD T SP L P + +AG +H+L+L
Sbjct: 757 GRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCAR--AASAGRQHSLVL 814
Query: 228 SDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+ G VW WG +GQLG G SR L + A G +L G+V + G
Sbjct: 815 ACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWGVVAVLAGGDSSMVLRADGTVWTWG 874
Query: 285 KAGRSYVKEIACGGRHS 301
G + + G R S
Sbjct: 875 ANGSGQLGDGTLGDRAS 891
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A G + TWG + GQ L G E P +P + VV +A H +
Sbjct: 407 GSFHSVAALSDGSVWTWGR-NTNGQ--LGDGTTTERHLPVRVPGLSGVVSVSASGHHSFA 463
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GE 174
+ G V+ WG R+ A D T K A P S +A G
Sbjct: 464 LRSDGTVWGWG-----------RN---AQGQMGDGTTKDRASPARVEGLSSVKALASGGS 509
Query: 175 EVVKRRKTSSAREESENPAS--GDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+V R + N A GD T +P VT GV T VAAG +L L
Sbjct: 510 HMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGV--TSVAAGAYFSLALRTD 567
Query: 231 GQVWGWGYGGEGQLGLGSRIK 251
G VW WG G EGQLG G+ ++
Sbjct: 568 GTVWAWGDGFEGQLGDGAGVQ 588
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 92/224 (41%), Gaps = 40/224 (17%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPF--PLPTEASVVKAAA--GW-AHCVSVTEAGEV 125
+ ++WGS + GQ L + G + EP LP+ +V A + W H ++ G V
Sbjct: 1069 RALSWGS-HEYGQ--LGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTV 1125
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
TWG G+A D T + A P A A R T +
Sbjct: 1126 QTWG--------------GNADGQLGDGTTESRATPITVAGLGAMVAVAPAA--RHTLAL 1169
Query: 186 REESENPASGDEFF-----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
R + A GD F TL +V L K+T +AAG H+L + + G VW
Sbjct: 1170 RSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLE---KVTAIAAGSYHSLAVREDGTVW 1226
Query: 235 GWGYGGEGQLGLGSR-IKMVPTPHL-IPCLEHAASGKDRPLLVR 276
WGY GQLG G+ + VPT L + A G+ L++R
Sbjct: 1227 AWGYNVFGQLGDGTMDARAVPTRMLGLDGAVAVAGGEYHSLMLR 1270
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 86/217 (39%), Gaps = 22/217 (10%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P+K P LS + A G +LA G + WGS + GQ L G
Sbjct: 141 TPQKVPGLSDVVA-----------VAAGEFHSLALRADGTVWAWGS-NFYGQ--LGRGHS 186
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P P + VV AAG+ ++V G V+ WG A + G Q+
Sbjct: 187 QPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWG-------ANGSGQLGDGTYIQR 239
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
+ + S L A + ++ T A + + GD +T P V +
Sbjct: 240 LAPTQVSQLQGVSAVTAGLYH-ALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSI 298
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+ VAA +L+L D G V+ WG +GQLG+G+
Sbjct: 299 ARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGT 335
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS----RIKMVPTPHLIPCLEHAASGKD 270
+KVAAG +H+L ++ G VW WG G GQLG GS R+ P L AA G
Sbjct: 51 SKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTDVTSIAA-GDA 109
Query: 271 RPLLVR 276
L +R
Sbjct: 110 HSLALR 115
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 90/234 (38%), Gaps = 16/234 (6%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA E G L+TWG + GQ L G G + P + + +AG AH + V G
Sbjct: 712 LAVREDGMLLTWGY-NRFGQ--LGLGAAGWSSLPVQVRGLGQGRRLSAGRAHSLLVRADG 768
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V WG + G + + S LP +A S R V+ T
Sbjct: 769 TVLAWG-------QNTSGQLGDGSTTHRASPVLARNLPCARAA-SAGRQHSLVLACDGTV 820
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ + GD T + + V AGG +++L G VW WG G GQ
Sbjct: 821 WSWGGNSQGQLGDGGVTSRAYPAKVEGLWGVVAVLAGGDSSMVLRADGTVWTWGANGSGQ 880
Query: 244 LG---LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ-GSVNSSGKAGRSYVKE 293
LG LG R + L + G+ L+V Q G+V + G GR + +
Sbjct: 881 LGDGTLGDRASPLEVKGL-AGIATGVMGEAHALVVSQDGTVWAWGANGRGQLGD 933
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---A 265
PG+ +T +AAG H+L L VW WG GQ+G G+ + PTP +P L
Sbjct: 96 PGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDR-PTPQKVPGLSDVVAV 154
Query: 266 ASGKDRPLLVR-QGSV-----NSSGKAGRSY 290
A+G+ L +R G+V N G+ GR +
Sbjct: 155 AAGEFHSLALRADGTVWAWGSNFYGQLGRGH 185
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 10 ENEKMEECKETVVYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSE 68
E + ++ V+ WG G + + S P R+ G + +V G ++LA
Sbjct: 908 EAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPVRVAGLSAAMNVSVGQA-YSLAVLP 966
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
G + +WG A+D GQ L G + P P+ A V AG H V+V G V+ W
Sbjct: 967 DGTVWSWG-ANDSGQ--LGDGTNVARTTPKPVQDLADVKAVTAGAHHVVAVRHDGTVWGW 1023
Query: 129 G 129
G
Sbjct: 1024 G 1024
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4009 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4067
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4068 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4109
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4110 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4158
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4159 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4212
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4123 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4180
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4181 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4223
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4224 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4280
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4281 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4330
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4013 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4071
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4072 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4113
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4114 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4162
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4163 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4216
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4127 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4184
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4185 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4227
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + G+
Sbjct: 4228 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGM 4284
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4285 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4334
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN 4223
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSVDGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4341
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4017 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4075
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4076 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4117
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4118 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4166
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL + SD VW +G G G+LGLG+
Sbjct: 4167 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGN 4220
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4131 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4188
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4189 ACGLNHTLAVSSDGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4231
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4232 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4288
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4289 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4338
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4128 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4185
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4186 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4228
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4229 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4285
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4286 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4335
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 87/234 (37%), Gaps = 53/234 (22%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4019 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4077
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4078 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4119
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
Q P GEEVV + S + S S + FT
Sbjct: 4120 ----------RQRRPXQ---GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4163
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4164 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4217
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 112/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V + ACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTS 307
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 463 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 517
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 518 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 561
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 562 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 621
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 622 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 657
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V + GV I VA G HTL L+ G V+ WG EGQLGLG V P L+ L
Sbjct: 3809 PQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVL 3867
Query: 263 E 263
+
Sbjct: 3868 Q 3868
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 85/223 (38%), Gaps = 37/223 (16%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 3558 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 3616
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 3617 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 3658
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP----CLVTL 208
+ + Q GEEVV + S + S S + FT L
Sbjct: 3659 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 3707
Query: 209 NPGVKIT--KVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
N K +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 3708 NTSNKKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 3750
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 95/259 (36%), Gaps = 66/259 (25%)
Query: 22 VYMWG--------------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
VY+WG +P T+P S +CG + + G A
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPATAPS----FSQAQQVICGQNCTFVIQANGTVLACGEG 4052
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
G+L G++DD + S G +V + H +++TE+GEV++
Sbjct: 4053 SYGRL-GQGNSDDLHVLTVISALQGFVV--------TQLVTSCGSDGHSMALTESGEVFS 4103
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
WG D+G G D + + Q GEEVV + S +
Sbjct: 4104 WG----------DGDYGKLGHGNSDRQRRPRQIEALQ--------GEEVV---QMSCGFK 4142
Query: 188 ESENPASGDEFFTLS-----------------PCLVTLNPGVKITKVAAGGRHTLILS-D 229
S S + FT P VT G +I +VA G HTL +S D
Sbjct: 4143 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Query: 230 MGQVWGWGYGGEGQLGLGS 248
VW +G G G+LGLG+
Sbjct: 4203 GSMVWAFGDGDYGKLGLGN 4221
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4132 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4189
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4190 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4232
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4233 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4289
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4290 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4339
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 95/259 (36%), Gaps = 66/259 (25%)
Query: 22 VYMWG--------------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
VY+WG +P T+P S +CG + + G A
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVPATAPS----FSQAQQVICGQNCTFVIQANGTVLACGEG 4063
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
G+L G++DD + S G +V + H +++TE+GEV++
Sbjct: 4064 SYGRL-GQGNSDDLHVLTVISALQGFVV--------TQLVTSCGSDGHSMALTESGEVFS 4114
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
WG D+G G D + + Q GEEVV + S +
Sbjct: 4115 WG----------DGDYGKLGHGNSDRQRRPRQIEALQ--------GEEVV---QMSCGFK 4153
Query: 188 ESENPASGDEFFTLS-----------------PCLVTLNPGVKITKVAAGGRHTLILS-D 229
S S + FT P VT G +I +VA G HTL +S D
Sbjct: 4154 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4213
Query: 230 MGQVWGWGYGGEGQLGLGS 248
VW +G G G+LGLG+
Sbjct: 4214 GSMVWAFGDGDYGKLGLGN 4232
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4143 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4200
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4201 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4243
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4244 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4300
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4301 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4350
>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 608
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 55/183 (30%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A S G L TWG + S + S +H LP+ +S K A GW H + +T+ GE
Sbjct: 438 ALSAEGHLYTWGRGF-KSTSDVYSPQH--------LPSPSSFSKVALGWNHALVLTDEGE 488
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+Y G + + L + ++ P D R
Sbjct: 489 LYMLGGK------------------HHGALSDSEMLNSMKSLPGDSR------------- 517
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
++ F P L G+K+ +AAG H++I+++ G V WG+G GQL
Sbjct: 518 -----------EDNFQAVPAL----SGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQL 562
Query: 245 GLG 247
GLG
Sbjct: 563 GLG 565
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 99/276 (35%), Gaps = 86/276 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG +A + G ++TWG + GQ L P+P + +AGW+H
Sbjct: 271 CGGA--HVIALTAGGGVLTWGRGN-SGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSH 327
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG--KQSALPTEQAPPSDKRAG 173
V++ G++YT G GSF + G + P E SDK
Sbjct: 328 SGFVSDEGKLYTCG----------------DGSFGQLGHGDYQLRCFPEEVLFFSDKH-- 369
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL---SDM 230
+ K+A G RH+L L S
Sbjct: 370 ----------------------------------------VDKIACGMRHSLALVKGSSG 389
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPLLVRQGSVNSSG 284
QV+G+G G GQLG+ +I+ V P L LE AA G L +G + + G
Sbjct: 390 EQVYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWG 449
Query: 285 KAGRSY--------------VKEIACGGRHSAVVTD 306
+ +S ++A G H+ V+TD
Sbjct: 450 RGFKSTSDVYSPQHLPSPSSFSKVALGWNHALVLTD 485
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + G+
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGM 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4341
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4019 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4077
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4078 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4119
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4120 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4169 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4222
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4133 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4190
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4191 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4233
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P V + GV
Sbjct: 4234 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGV 4290
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4291 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4340
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4018 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4076
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4077 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4118
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4119 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4168 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4221
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4132 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4189
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4190 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4232
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4233 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4289
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4290 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4339
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4019 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4077
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4078 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4119
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4120 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4169 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4222
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4133 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4190
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4191 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4233
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P V + GV
Sbjct: 4234 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGV 4290
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4291 VIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4340
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 70/291 (24%), Positives = 111/291 (38%), Gaps = 70/291 (24%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLHDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPP----SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+A + G+ + A SP L+ G+ +VAA
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDYKKQA----------------SPQLIKSLLGIPFMQVAA 197
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PL 273
GG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-FPNLLKSLRTQKIVYICCGEDHTAA 256
Query: 274 LVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 70/291 (24%), Positives = 111/291 (38%), Gaps = 70/291 (24%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLHDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPP----SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
+A + G+ + A SP L+ G+ +VAA
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDYKKQA----------------SPQLIKSLLGIPFMQVAA 197
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PL 273
GG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-FPNLLKSLRTQKIVYICCGEDHTAA 256
Query: 274 LVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4341
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + G+
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGM 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4341
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4015 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4073
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4074 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4115
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4116 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4164
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4165 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4218
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4129 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4186
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4187 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4229
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4230 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4286
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4287 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4336
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4012 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4070
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4071 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4112
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4113 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4161
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4162 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4215
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4126 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4183
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4184 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4226
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + G+
Sbjct: 4227 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGM 4283
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4284 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4333
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4023 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4081
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4082 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4123
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4124 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4172
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4173 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4226
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4137 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4194
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4195 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4237
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + L GV
Sbjct: 4238 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLAGV 4294
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4295 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4344
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 95/259 (36%), Gaps = 66/259 (25%)
Query: 22 VYMWG--------------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
VY+WG +P T+P S +CG + + G A
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPATAPS----FSQAQQVICGQNCTFVIQANGTVLACGEG 4052
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
G+L G++DD + S G +V + H +++TE+GEV++
Sbjct: 4053 SYGRL-GQGNSDDLHVLTVISALQGFVV--------TQLVTSCGSDGHSMALTESGEVFS 4103
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
WG D+G G D + + Q GEEVV + S +
Sbjct: 4104 WG----------DGDYGKLGHGNSDRQRRPRQIEALQ--------GEEVV---QMSCGFK 4142
Query: 188 ESENPASGDEFFTLS-----------------PCLVTLNPGVKITKVAAGGRHTLILS-D 229
S S + FT P VT G +I +VA G HTL +S D
Sbjct: 4143 HSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSAD 4202
Query: 230 MGQVWGWGYGGEGQLGLGS 248
VW +G G G+LGLG+
Sbjct: 4203 GSMVWAFGDGDYGKLGLGN 4221
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4132 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4189
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4190 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4232
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4233 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4289
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4290 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4339
>gi|255074853|ref|XP_002501101.1| predicted protein [Micromonas sp. RCC299]
gi|226516364|gb|ACO62359.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 402
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 110/306 (35%), Gaps = 52/306 (16%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPE 96
IL P G S VCGG +A + G++ TWG ++ GQ L + P
Sbjct: 35 ILEPTRIATLKGVSIAKVCGGSAATHCMAIAADGRVFTWGR-NETGQLGLGDVDNRAAPT 93
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR------------------------- 131
VV + G +H V VT G Y WG
Sbjct: 94 EVKALAGIKVVDGSCGKSHTVVVTADGNAYAWGSNKHGQLGVGSIARTKPKEDDNRLVPV 153
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-GEEVVKRRKTSSAREESE 190
+C SA V G+ F G L + P + G + TSS + E
Sbjct: 154 QCSVSACVAVACGA--EFSMWICGDDGKLLSAGLPQYGQLGHGTDGEYNMATSSVKLAYE 211
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
P + G KITKVA+G HT+ + D G+ WG+GG G+LG +
Sbjct: 212 AQPQ--------PLPIAALAGRKITKVASGHNHTIAVDDQGKFHTWGFGGYGRLGHKVQ- 262
Query: 251 KMVPTPHLIPCLEHAASGKDRPL-----LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
K TP ++ G DR L +V G S A + ++ C GR
Sbjct: 263 KDEWTPKMVE-----IQGGDRNLCPPDCVVAAGQTTSWVTA---LMGQMYCFGRLKTTGD 314
Query: 306 DMSYPI 311
+ YP+
Sbjct: 315 NTMYPV 320
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + G+
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGM 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4341
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 29/206 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G G +LA +E+G++ +WG D + S + + L E VV+ A G+ H
Sbjct: 3952 GSDGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGE-EVVQLACGFKHSA 4010
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
VT G+++T+G G +G + ST + +P G+ ++
Sbjct: 4011 VVTADGKLFTFG-------------SGDSGRLGQRSTSNK-MIPERVTALDGHHIGQRLI 4056
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
A ++ N P ++ GV I +A G H L LS+ G V+ WG
Sbjct: 4057 G---LPDAMLKNHN----------RPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWG 4103
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLE 263
E QLGLG V P L+ L+
Sbjct: 4104 CNCEAQLGLGHS-NPVKEPILVTTLQ 4128
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 82/218 (37%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + +P + VV +AG
Sbjct: 463 GSDGHTLAVTAEGEVFSWGDGD-----YGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAG 517
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VT GE+YTWG DFG G DS + +PT S
Sbjct: 518 YRHSAAVTNDGELYTWG----------EGDFGRLG--HSDSHSRN--VPTLVKDISG--V 561
Query: 173 GEEVVKRRKTSSAREESE-----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
G+ T + ++ GD P ++ G I KV AG
Sbjct: 562 GQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGS 621
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 622 QSSLALTSAGQVFAWGCG--SCLGCGSSETTSLRPRLI 657
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 30/115 (26%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ D+ +T P +++ G +T++ H+L L++ G+V+ WG G G+LG G+
Sbjct: 3926 NSDDLYT--PTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGHGN-- 3981
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ + RP + G G V ++ACG +HSAVVT
Sbjct: 3982 ---------------SERQRRPKQIE-------GLQGEEVV-QLACGFKHSAVVT 4013
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 3983 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4041
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4042 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4083
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4084 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4132
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4133 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4186
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4097 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4154
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4155 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4197
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + G+
Sbjct: 4198 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGM 4254
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4255 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4304
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAG-EVY 126
+WG +D GQ HG+T + LPT+ S +V G + V+ +++G +VY
Sbjct: 72 SWGRGED-GQL-----GHGDTDDRL-LPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVY 124
Query: 127 TWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+WGW DFG G F L +Q D ++ +
Sbjct: 125 SWGWG----------DFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENK 174
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
S R ++ G + P + G++I VAAG H++ +++ G ++GWG+G
Sbjct: 175 VLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGR 234
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG-----SVNSSG 284
G LGLG LIP E D+ ++V G S++SSG
Sbjct: 235 YGNLGLGD-----TNDRLIP--EKVNIDGDKIVMVSCGWRHTISISSSG 276
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 3661 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 3719
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 3720 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 3761
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 3762 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 3810
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 3811 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 3864
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 85/215 (39%), Gaps = 42/215 (19%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 3775 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 3832
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 3833 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 3875
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 3876 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 3932
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
I VA G HTL L+ G V+ WG EGQLGLG
Sbjct: 3933 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 3967
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 59/205 (28%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAA 110
+K + G C LA +E G+L +WG + +GQ L S E TP + +V+ A
Sbjct: 86 FKKIACGSC-HTLAVNEWGQLFSWG-CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++T GE+Y+WG S ++ G S TE P
Sbjct: 144 CGIEHSIALTNDGELYSWG------------------SNREGQLGIGSHTVTEIKP---- 181
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
KR ++TL V I +A GG HT+++S
Sbjct: 182 -------KR-------------------------IITL-AAVPIAFIACGGYHTVVISKS 208
Query: 231 GQVWGWGYGGEGQLGLG-SRIKMVP 254
G V+ WG GQLGL ++ ++VP
Sbjct: 209 GVVFAWGRNTFGQLGLNDTQQRIVP 233
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP-EPFPLPTEASVVKA--AAGW 113
CG ++A + G+L +WGS + EGQ L G H T +P + T A+V A A G
Sbjct: 143 ACGIEHSIALTNDGELYSWGS-NREGQ--LGIGSHTVTEIKPKRIITLAAVPIAFIACGG 199
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA- 172
H V ++++G V+ WG FG G + +Q +P + + +
Sbjct: 200 YHTVVISKSGVVFAWG----------RNTFGQLGL----NDTQQRIVPCQLRTLRNAKVC 245
Query: 173 ----GEE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
GEE + + G+ + P V G +T+++ G RH
Sbjct: 246 YAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRH 305
Query: 224 TLIL-SDMGQVWGWGYGGEGQLG-LGSRIKMVPTPHLIP 260
TL L G+V+ WG GG GQLG SR P L P
Sbjct: 306 TLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVVLGP 344
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 27/104 (25%)
Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ L PG+ K+A G HTL +++ GQ++ WG +GQLGL S TP ++ L
Sbjct: 75 LQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKAL 134
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G S + +IACG HS +T+
Sbjct: 135 ------------------------GTSVIVQIACGIEHSIALTN 154
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 64/198 (32%), Gaps = 79/198 (39%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K A G H ++V E G++++WG K G S TE+ P
Sbjct: 88 KIACGSCHTLAVNEWGQLFSWGCN------------------MKGQLGLNSVDCTERTPR 129
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
K G V I ++A G H++ L
Sbjct: 130 MVKALGTSV-------------------------------------IVQIACGIEHSIAL 152
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
++ G+++ WG EGQLG+GS P I L
Sbjct: 153 TNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAVP--------------------- 191
Query: 288 RSYVKEIACGGRHSAVVT 305
+ IACGG H+ V++
Sbjct: 192 ---IAFIACGGYHTVVIS 206
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-----ASVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4063 EEVIQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4120
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4121 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4163
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4164 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4220
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I +A G HTL L+ G V+ WG EGQLGLG V P LI L+
Sbjct: 4221 VIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLITILQ 4270
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 3949 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4007
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4008 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4049
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEV+ + S + S S + FT
Sbjct: 4050 RQRRPRQIEALQ--------GEEVI---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4098
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4099 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4152
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 112/311 (36%), Gaps = 68/311 (21%)
Query: 17 CKETVVYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
C + ++ WG+ G PE SP G GG LA + G+
Sbjct: 57 CDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGW-HCLAVDDKGRA 115
Query: 73 ITWGSADDEGQSYLTSGKHGETPE-----------PFPLPTEAS----VVKAAAGWAHCV 117
WG G Y G+ GE PE P+P + V + AAG H V
Sbjct: 116 YAWG-----GNEY---GQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSV 167
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV- 176
+T+ G V+TWG + P + K+ + EQ A +
Sbjct: 168 VLTQEGHVWTWG--QPWPPGDI-----------KNISTPVRVQGLEQVSMIAVGAFHNLA 214
Query: 177 --VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
V R + E GD P V + + +AAGG H+ L+ G+V+
Sbjct: 215 LSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVY 274
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG G G+LG G + H++P +G+D + ++
Sbjct: 275 AWGRGEHGRLGFGDD----KSSHMVPLQVQLLAGED--------------------IVQV 310
Query: 295 ACGGRHSAVVT 305
+CGG HS V+T
Sbjct: 311 SCGGTHSVVLT 321
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
D+ + P V L G I +V+ GG H+++L+ G+++ +G G G+LG G ++
Sbjct: 289 DKSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVT-TGH 347
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV---TDM 307
P +P L + S +S G +YV ACGGRH+ + TDM
Sbjct: 348 PMEVPI----------NLPPPKTSTSSEGLWQANYV---ACGGRHTLAIVTWTDM 389
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4341
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ T++ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4133 EEVVQMSCGFKHSAVVTAD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4190
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H V+V+ G + W FG G + K G +A + Q D
Sbjct: 4191 ACGLNHTVAVSTDGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4233
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P V + GV
Sbjct: 4234 ILCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGV 4290
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I +A G HTL LS G V+ WG EGQLGLG V P LI L+
Sbjct: 4291 FIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLITVLQ 4340
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4019 PVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4077
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4078 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4119
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S + + FT
Sbjct: 4120 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4168
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HT+ +S D VW +G G G+LGLG+
Sbjct: 4169 NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN 4222
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4019 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4077
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4078 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4119
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4120 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4169 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN 4222
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4133 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4190
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G V W FG G + K G +A + Q D
Sbjct: 4191 ACGLNHTLAVSADGSV-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4233
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4234 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4290
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4291 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4340
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ T++ GKL T+G+ D G+ L + + + PE + +
Sbjct: 3607 EEVVQMSCGFKHSAVVTAD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 3664
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H V+V+ G + W FG G + K G +A + Q D
Sbjct: 3665 ACGLNHTVAVSMDGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 3707
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P V + GV
Sbjct: 3708 ILCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGV 3764
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I +A G HTL LS G V+ WG EGQLGLG V P LI L+
Sbjct: 3765 FIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLITVLQ 3814
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 3493 PVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 3551
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 3552 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 3593
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S + + FT
Sbjct: 3594 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 3642
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HT+ +S D VW +G G G+LGLG+
Sbjct: 3643 NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGN 3696
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 3957 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4015
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4016 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4057
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4058 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4106
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4107 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN 4160
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P + + GV I VA G HTL L+ G V+ WG EGQLGLG V P L+ L
Sbjct: 4219 PQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGL 4277
Query: 263 E 263
+
Sbjct: 4278 Q 4278
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 3987 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4045
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4046 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4087
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4088 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4136
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4137 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4190
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4101 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4158
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4159 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4201
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4202 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4258
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4259 VIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4308
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 111/278 (39%), Gaps = 75/278 (26%)
Query: 53 KDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASV 106
+D+ CG G A+A++ G+L TWG + Y G HG+T P+ V
Sbjct: 3064 RDIACGSGHSAAIASN--GELYTWGLGE-----YGRLG-HGDTTTHLKPKLVDALVGQRV 3115
Query: 107 VKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
++ A G A +++TE G VY+WG DFG G + S G S LP
Sbjct: 3116 IQVACGSRDAQTMALTEDGSVYSWG----------DGDFGKLG--RGGSDGCYSPLPV-- 3161
Query: 165 APPSDKRAGEEVVKRR---KTSSA-----------REESENPASGDEFFTLSPCLVTLNP 210
D+ G VV+ + S A + + G++ P LV
Sbjct: 3162 ----DRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLR 3217
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G K+ VA G H L ++D GQV+ WG GQ G GS + + P L+ LE A
Sbjct: 3218 GKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTM-VNRKPSLVHNLEDAK---- 3272
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA--VVTD 306
V +ACG HS V+TD
Sbjct: 3273 --------------------VNRVACGSSHSIAWVLTD 3290
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 27/108 (25%)
Query: 200 TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
+ P L+ V I KVA +GG+H L LS G V+ WG G +G+LG G+RI
Sbjct: 3967 VMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITY----- 4021
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
DRP L+ G V +IACGG HSA ++
Sbjct: 4022 ------------DRPKLIE-------ALLGTEIV-DIACGGHHSAAIS 4049
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 40 SPIPA-RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
SP+P RL G + CG F+LA ++ G++ TWG D Y G +
Sbjct: 3157 SPLPVDRLNGLGVVQVECGAQ--FSLALTKYGEVWTWGKGD-----YFRLGHGNDHHVRR 3209
Query: 99 PLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
P E VV A G HC++VT+AG+VY WG
Sbjct: 3210 PTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWG 3244
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 85/250 (34%), Gaps = 90/250 (36%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ VVK
Sbjct: 4092 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESLAGLGVVKVEC 4146
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4147 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4174
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK S+ + G KI +A G H + SD G
Sbjct: 4175 TDDHVRRPRKVSALQ------------------------GKKIVSIATGSLHCVACSDKG 4210
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+V+ WG EGQLG G+ +P L+ HA GK+ +
Sbjct: 4211 EVYTWGDNDEGQLGDGT-THAQQSPRLV----HALQGKN--------------------I 4245
Query: 292 KEIACGGRHS 301
+ACG H+
Sbjct: 4246 TRVACGSAHT 4255
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 25/93 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+R+ + D+
Sbjct: 3009 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSL-----------------DK 3051
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
P L+ + K+ R +++IACG HSA +
Sbjct: 3052 PRLIE------ALKSKR--IRDIACGSGHSAAI 3076
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 101/260 (38%), Gaps = 59/260 (22%)
Query: 18 KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
+ VY+WG L G S K P+ S + ++L K + GG S+
Sbjct: 2920 QNAAVYVWGLNDKDQLGGLKG-SKIKLPVHSEVLSKL------KPIHIAGGSKTLFVVSQ 2972
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
GKL G + G+ L + P+P P ++ + K A +G H +++T+ G+V+
Sbjct: 2973 EGKLYACGEGTN-GRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVF 3031
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
+WG E G G + S K P KR R +
Sbjct: 3032 SWGEGE----------DGKLGHGNRVSLDK----PRLIEALKSKRI-------RDIACGS 3070
Query: 187 EESENPASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGGR--HTLIL 227
S AS E +T L P LV G ++ +VA G R T+ L
Sbjct: 3071 GHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMAL 3130
Query: 228 SDMGQVWGWGYGGEGQLGLG 247
++ G V+ WG G G+LG G
Sbjct: 3131 TEDGSVYSWGDGDFGKLGRG 3150
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
GD L P +VT G K+ VA +G TL ++D VW WG G G+LG G
Sbjct: 4068 GDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG 4122
>gi|336467535|gb|EGO55699.1| hypothetical protein NEUTE1DRAFT_67580 [Neurospora tetrasperma FGSC
2508]
gi|350287815|gb|EGZ69051.1| RCC1/BLIP-II [Neurospora tetrasperma FGSC 2509]
Length = 609
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 119/303 (39%), Gaps = 66/303 (21%)
Query: 22 VYMWGYLPG--TSPEKSPILSPIPARLCGGDS--WKDVCGGGCGFALATSESGKLITWGS 77
VY WG G +P+ + ++ P R+ D +D+ F A E G L+ WG
Sbjct: 119 VYAWGSNVGKVVAPDSNELVIKTPRRIAYFDDQVLRDL-KLDSNFGAAIDEKGNLVQWGV 177
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
D+ T G+ +VK + + GEVY+ +P A
Sbjct: 178 GFDKDHYKPTVTLKGK-----------DLVKLDVSRDRIIGLASNGEVYS------IPVA 220
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAP-------PSDKRAGEEVVKRRK--------T 182
+ G QK++T S+L + QAP P + R GE++V R T
Sbjct: 221 AADQRAG-----QKETTASPSSLWSSQAPVNYRPLTPKNLRWGEKIVDVRSGLEHCLMLT 275
Query: 183 SSAREESENPASGDEFFTL-------------------SPCLVTLNPGVKITKVAAGGRH 223
S+ R S AS ++F + P VT G KI ++AAG H
Sbjct: 276 SNGRVFSA-AASSEDFPSKGQLGVPGLTWTNRPAGPYDQPHEVTGLSGSKIKEIAAGDYH 334
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIK--MVPTPHLIPC--LEHAASGKDRPLLVRQGS 279
+L L G+V+ +G GQLG + + V +P +P L H + + + + G
Sbjct: 335 SLALDTEGRVYAFGDNSFGQLGFENDTEHPYVDSPRPVPINKLYHGTNLRPKVTYIAAGG 394
Query: 280 VNS 282
NS
Sbjct: 395 PNS 397
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 104/279 (37%), Gaps = 85/279 (30%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA-- 111
+ G F+ A +G++ +WG +Y G+ +P PT+AS++ A
Sbjct: 224 NTLAAGGYFSAAIKPNGQVWSWGD-----NTYGQLGRATTSPSD-STPTQASLINDAVSI 277
Query: 112 --GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
G H +++T G V T G R+ D+G G DS+G +A
Sbjct: 278 SLGEYHAIALTNDGRVVTLG-RD---------DYGQLGDGPGDSSGTHTA---------- 317
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
P D L G+K V AG H+L L+
Sbjct: 318 ----------------------PNLRDNI---------LPAGIKAVAVQAGRYHSLALTS 346
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR-QGSV----- 280
G V+ WG GQLGLG+ +P LIP L A+G D L ++ GSV
Sbjct: 347 EGTVYAWGRNDVGQLGLGTITAPQESPALIPGLSDVIALAAGDDHTLALKADGSVWAWGD 406
Query: 281 NSSGKAGRSY---------------VKEIACGGRHSAVV 304
N +G+ G VK IA GG HS +
Sbjct: 407 NPNGELGTGDITPYSVPTAVSNLPGVKAIAAGGNHSVAL 445
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 63 ALATSESGKLITWGSADDEGQ----SYLTSGKH-GETPEPFPLPTEASVVKAAAGWAHCV 117
A+A + G+++T G DD GQ +SG H LP V AG H +
Sbjct: 284 AIALTNDGRVVTLGR-DDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYHSL 342
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE-V 176
++T G VY WG D G G + + AL + AG++
Sbjct: 343 ALTSEGTVYAWG----------RNDVGQLGLGTITAPQESPALIPGLSDVIALAAGDDHT 392
Query: 177 VKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ + S +NP +GD P V+ PGVK +AAGG H++ L G
Sbjct: 393 LALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPGVK--AIAAGGNHSVALLADGT 450
Query: 233 VWGWGYGGEGQLGLGSRIK-MVPTP 256
V WGY GQLG GS VP P
Sbjct: 451 VRTWGYNNHGQLGNGSNTNSNVPVP 475
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 467 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 521
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 522 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 565
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 566 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 625
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 626 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 661
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 88/237 (37%), Gaps = 48/237 (20%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
SP SP +CG + + G A G+L G++DD + S
Sbjct: 4108 AVSPPPSPSFCQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISA 4166
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
G +V + H +++TE+GEV++WG D+G G
Sbjct: 4167 LQGFVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHG 4208
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS------- 202
D + + Q GEEVV + S + S + + FT
Sbjct: 4209 NSDRQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTADGKLFTFGNGDYGRL 4257
Query: 203 ----------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P V G +I +VA G HTL++S D VW +G G G+LGLG+
Sbjct: 4258 GLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGN 4314
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
GV + +A G HTL LS G V+ WG EGQLGLG V P L+ L+
Sbjct: 4381 GVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLG-HTNHVREPTLVTSLQ 4432
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA----HCVSVTEAGEVYTW 128
+WG +D T+ G +P P VV A G H +VTE G+VYTW
Sbjct: 1 FSWGFNNDGALGLGTTDAVG-SPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTW 59
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G S ++ + G QS E A S A VV + A
Sbjct: 60 G---SGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGS---AHTVVVSKAGLVFAWGW 113
Query: 189 SE--NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
G + P VT GVK+ KVA G HT ++++ G V+ WG+G GQLG
Sbjct: 114 GHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173
Query: 247 GSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G + + RP+ V+ K YV +ACG H+ VV++
Sbjct: 174 GDD-----------------ASQSRPMYVK--------KLHGIYVSTLACGLAHTVVVSE 208
Query: 307 MSYPI 311
+ +
Sbjct: 209 VDRAV 213
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 90/258 (34%), Gaps = 36/258 (13%)
Query: 5 GSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA- 63
G EE ++ VY WG + + RL G + CG A
Sbjct: 39 GGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAH 98
Query: 64 -LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+ S++G + WG GQ + S + P V K A G AH VTE+
Sbjct: 99 TVVVSKAGLVFAWGWGH-FGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTES 157
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS-----------ALPTEQAPPSDKR 171
G VYTWGW G G QS + T +
Sbjct: 158 GHVYTWGW-------------GVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTV 204
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFF----TLSPCLVTLNPGVKITKVAAGGRHTLIL 227
EV + + E + G + F SP P + ++A G +TL L
Sbjct: 205 VVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNRSP-----RPIKDLQQIACGSSYTLAL 259
Query: 228 SDMGQVWGWGYGGEGQLG 245
S G V+ +G+G +GQLG
Sbjct: 260 SSRGDVYAFGWGKDGQLG 277
>gi|118375248|ref|XP_001020809.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila]
gi|89302576|gb|EAS00564.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila
SB210]
Length = 4058
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 53/220 (24%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRE-----CVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+V G H +++T AGE+Y WG + C+ S + +++ S +K+ Q+ +
Sbjct: 583 IVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCI-SNIIRQEYDE--SNEKNINIIQNDI 639
Query: 161 PTEQAPP--------SDKR-----AGEEVV-----KRRKTSSAREESENPASGD-EFFTL 201
E P ++R AG E KR + R G +++
Sbjct: 640 SKETLPSVVSFFNIKENRRITYIAAGYEYCMAIENKRLVYAWGRNTDGQLGIGKTQYYVE 699
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
SP +V G + +A G HTL L+D GQV+ G +G+LGLG+R P LI
Sbjct: 700 SPQMVLGLEGNLMKAIACGENHTLFLTDTGQVYSCGSSKDGKLGLGNRTNTQLQPQLITN 759
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
L S V++I+CG HS
Sbjct: 760 L--------------------------SKVEQISCGQSHS 773
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 38/187 (20%)
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+ V G H +++T AGE+Y WG E S L E
Sbjct: 2651 SEFVDVQLGTFHSMALTNAGELYIWGSNE-------------------SSQHAVDDLQIE 2691
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
QA ++ + + K + + + S FF + +++ +A G +
Sbjct: 2692 QA------YVDQAISKIKINVQTLVTSSLPSLVNFFDI-------KENRRVSFIACGAEY 2738
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPL-LVRQ 277
+ + + +V+GWG +GQLG+G+ +V P + LE A G+ L L +
Sbjct: 2739 CMAIENRRKVYGWGKNDQGQLGIGAISTIVHKPTEVQGLEGLLMKQVACGQVHTLFLSEE 2798
Query: 278 GSVNSSG 284
G V S G
Sbjct: 2799 GCVYSCG 2805
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
>gi|296819631|ref|XP_002849878.1| RNA transport protein 2 [Arthroderma otae CBS 113480]
gi|238840331|gb|EEQ29993.1| RNA transport protein 2 [Arthroderma otae CBS 113480]
Length = 565
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 34/184 (18%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ VV+ AAG HCV++T G+V TWG + + RD G +
Sbjct: 183 DVGVVQVAAGGMHCVALTHDGKVLTWGVND---QGALGRDTAWEGGLKD----------- 228
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
D ++ T ES A + F G I +VAAG
Sbjct: 229 -----IDAKSDCSSDSGSDTGLNPHESTPTAIPSDAFP---------EGTVIVQVAAGDS 274
Query: 223 HTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRPL-LVR 276
+ L+D G V+GWG G EG +G + K+ TP LIP L+ H A G + L L
Sbjct: 275 SSFALTDDGLVYGWGTFRGNEGIIGFDADTKIQATPKLIPGLKKITHLACGDNHTLALDS 334
Query: 277 QGSV 280
+G+V
Sbjct: 335 RGAV 338
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 94/280 (33%), Gaps = 87/280 (31%)
Query: 21 VVYMWGYLPGT--------------SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALAT 66
+VY WG G +P+ P L I CG + LA
Sbjct: 284 LVYGWGTFRGNEGIIGFDADTKIQATPKLIPGLKKITHLACGDN-----------HTLAL 332
Query: 67 SESGKLITWGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
G + WGS G+ + K +G P F LP ++V G H +V ++G
Sbjct: 333 DSRGAVFAWGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NIVHVGCGSFHSFAVHKSG 390
Query: 124 EVYTWGWR------------------------ECVPSAKVTRDFG-SAGSFQKDSTGK-- 156
+VY WG + + +T+ G S S + + G+
Sbjct: 391 KVYGWGLNSYCETGIQQGAGDDEAVVLHPTVIDSLKDKNITQICGGSHHSLARTAEGECL 450
Query: 157 --------QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
QS L E P S V + + AR P V
Sbjct: 451 VWGRLDGFQSGLKVENLPDS-------AVIKDDRNRAR------------VLFQPTAV-- 489
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
PG K VAAG H++ + + G+ W WG+ Q G G+
Sbjct: 490 -PGFKAEYVAAGADHSIAIDNDGRAWTWGFSANYQTGQGT 528
>gi|166240446|ref|XP_001733000.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|165988602|gb|EDR41072.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 883
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 110/275 (40%), Gaps = 34/275 (12%)
Query: 59 GCGFALATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEAS------VVKAA 110
G +LA + G + +WG+ + G G+ P + T AS VV+ +
Sbjct: 251 GSHHSLALDDLGLVYSWGNGSNGRLGLELHILGEKKIVSTPTLISTIASNTLDPVVVQIS 310
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
AG+ + +T G VY++G S K+ D G+ +Q +S P +Q S+
Sbjct: 311 AGFDNSFLITSNGSVYSFG---SAISEKLGYD-GTVLGYQALPRKIESIPPMKQVSASNL 366
Query: 171 RA------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG----VKITKVAAG 220
G T+ N D P +V+ G I K+A G
Sbjct: 367 HTVLLDTCGNVYAFGSPTNGRLGRPSNGPRND----YKPTMVSFGSGGGDGTVIKKIATG 422
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM---VPTPHLIPCLEHAASGKDRPLLVRQ 277
T++LSD G+++GWG GQLG+ + +P LI CL + GK + +
Sbjct: 423 TNFTIVLSDSGELFGWGGNSNGQLGVEPICNVSDSFDSPTLIKCLSNLNCGK---ITIHD 479
Query: 278 GSVNSSGKAGRSYVKEIACGG--RHSAVVTDMSYP 310
+V S V E+ C G R + +SYP
Sbjct: 480 FAVGDQHVVILSDVGEVFCFGEDRKAQCGIGISYP 514
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 14/88 (15%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI----KMVPTPHLI--------- 259
+I ++ G H+L L D+G V+ WG G G+LGL I K+V TP LI
Sbjct: 244 RIKSISCGSHHSLALDDLGLVYSWGNGSNGRLGLELHILGEKKIVSTPTLISTIASNTLD 303
Query: 260 PCLEHAASGKDRPLLV-RQGSVNSSGKA 286
P + ++G D L+ GSV S G A
Sbjct: 304 PVVVQISAGFDNSFLITSNGSVYSFGSA 331
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-----ASVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 103/275 (37%), Gaps = 41/275 (14%)
Query: 8 REENEKMEECKETVVY-----MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
+ NE + K+ +VY +G L GT S I LCG S K G
Sbjct: 34 KAANETLIVTKDDMVYGIGNNTYGCL-GTGDTHSTIYPKKIEALCG-KSVKTFAYGKGPH 91
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVS 118
LA +E GK+ +WG D + G S G TP P L E VV A G H ++
Sbjct: 92 VLALTEEGKVYSWGYNDYCELGNR---STNEGLTPTLIPSALNNEF-VVDIACGGHHSLA 147
Query: 119 VTEAGEVYTWGWR------------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
+T GEVY WG P K+ + S G S++
Sbjct: 148 LTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNG 207
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
G V + + ++E P V + I KV G HTL
Sbjct: 208 EV-YSWGHNGVGQLGIGNCTSQAE------------PQKVATFAKIVIEKVVCGYMHTLA 254
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLIP 260
LSD G ++ WG GQLGL + + +PT +P
Sbjct: 255 LSDEGDLYVWGANSYGQLGLNTDSNVWIPTKLQVP 289
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 27/109 (24%)
Query: 201 LSPCLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTPH 257
L+P L+ LN + +A GG H+L L++ G+V+ WG+ GQ+G G+ + V P P
Sbjct: 121 LTPTLIPSALNNEF-VVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPK 179
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L L +GK V I+CG S VTD
Sbjct: 180 L---LHIVLNGKK--------------------VVHISCGDSSSVAVTD 205
>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1073
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G F+LA G L +WG+ + +GQ T + P +P ++ +AG +
Sbjct: 79 AGKDFSLALDSLGVLYSWGN-NSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGDDY 137
Query: 116 CVSVTEAGEVYTWGWRE------------CVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
V++ +Y+WG E +P +V + SF + STG L
Sbjct: 138 AVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVL--- 194
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
A SD V SS + E + + +P V+L GVKIT+V AGG+
Sbjct: 195 -AVCSDG----TVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGKA 249
Query: 224 TLILSDMGQVWGWGYGGEGQLG 245
+L L+ G V+ WG GQLG
Sbjct: 250 SLALASDGSVYSWGDNSSGQLG 271
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 74/191 (38%), Gaps = 17/191 (8%)
Query: 59 GCGFALATSESGKLITWG--SADDEGQSYLTSGKH--GETPEPFPLPTEASVVKAAAGWA 114
G + LA G + +WG S+ G+ + H P P LP + + AG
Sbjct: 189 GPNYVLAVCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGK 248
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
+++ G VY+WG S+G + + + A + +D
Sbjct: 249 ASLALASDGSVYSWG-------------DNSSGQLGRTPSASEPANRAYKMTTADGMNFS 295
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
++ + A + N S T P V L G++ ++AG ++L+ + G ++
Sbjct: 296 QISAGYRHILAVDSDGNTYSWGYGGTSQPSKVALPDGIRTRLISAGHDYSLVTASDGNIY 355
Query: 235 GWGYGGEGQLG 245
WG GQLG
Sbjct: 356 SWGDNSSGQLG 366
Score = 42.0 bits (97), Expect = 0.38, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 28/258 (10%)
Query: 21 VVYMWG-----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
V+Y WG L T + P P + G + + G +A+A + L +W
Sbjct: 92 VLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD-DYAVAIDINHHLYSW 150
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPT---EASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
G+ +++GQ+ P +P+ S V+ + G + ++V G VY+WG
Sbjct: 151 GN-NEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLAVCSDGTVYSWGDNS 209
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALP--------TEQAPPSDKRAGEEVVKRRKTSS 184
S ++ R+ G + +LP T S A + V +S
Sbjct: 210 ---SGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGKASLALASDGSVYSWGDNS 266
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ- 243
+ + P++ + +T G+ ++++AG RH L + G + WGYGG Q
Sbjct: 267 SGQLGRTPSASEP--ANRAYKMTTADGMNFSQISAGYRHILAVDSDGNTYSWGYGGTSQP 324
Query: 244 ----LGLGSRIKMVPTPH 257
L G R +++ H
Sbjct: 325 SKVALPDGIRTRLISAGH 342
Score = 41.2 bits (95), Expect = 0.57, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 90/263 (34%), Gaps = 46/263 (17%)
Query: 22 VYMWG----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+Y WG Y G + P++ PA G + G FALA G + TWG+
Sbjct: 624 LYSWGINYDYQLGHTTSDKPVVVETPA----GVRYTQAAAGQ-KFALALGSDGYVYTWGN 678
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
+ T G + P+ P + AG +++ G +Y WG
Sbjct: 679 NTYDQLGRSTFGNNHNAPDKVTPPAGIHYTRVYAGDCFALALGSDGNLYAWG-------- 730
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPS--------DKRAGEEVVKRRKTSS----- 184
SAG+ + G S P P + + V+ +
Sbjct: 731 -----DNSAGALGQGRIGATSRNPLRVVAPEGITFTQVFTGPSSKHVLALGSDGNLYSWG 785
Query: 185 -------AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
R+ + A GD P V G+ T+ + G +L L ++ WG
Sbjct: 786 YDDSFQLGRQRNALTALGDPL----PGKVQAPAGITFTQASTGLNFSLALGSDNNLYSWG 841
Query: 238 YGGEGQLGLGSRIKMVPTPHLIP 260
G + QLG I M P+ ++P
Sbjct: 842 NGLKSQLGNAQMISMYPSNVIMP 864
Score = 40.4 bits (93), Expect = 0.95, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 9/107 (8%)
Query: 23 YMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEG 82
Y WGY + P K + I RL G ++L T+ G + +WG
Sbjct: 314 YSWGYGGTSQPSKVALPDGIRTRLISA---------GHDYSLVTASDGNIYSWGDNSSGQ 364
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T G+ P P + +A AG+ H +++ G +Y WG
Sbjct: 365 LGQDTGGETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWG 411
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 47/200 (23%), Positives = 68/200 (34%), Gaps = 30/200 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA G L +WG D + TS K P P +AAAG ++
Sbjct: 611 GADFSLALGSDGNLYSWGINYDYQLGHTTSDK----PVVVETPAGVRYTQAAAGQKFALA 666
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G VYTWG + + + G P + PP+
Sbjct: 667 LGSDGYVYTWG-------------NNTYDQLGRSTFGNNHNAPDKVTPPAGIHYTRVYAG 713
Query: 179 RRKTSSAREESENPASGDE-----------FFTLSPCLVTLNPGVKITKVAAG--GRHTL 225
+ + A GD + +P V G+ T+V G +H L
Sbjct: 714 DCFALALGSDGNLYAWGDNSAGALGQGRIGATSRNPLRVVAPEGITFTQVFTGPSSKHVL 773
Query: 226 ILSDMGQVWGWGYGGEGQLG 245
L G ++ WGY QLG
Sbjct: 774 ALGSDGNLYSWGYDDSFQLG 793
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 72/298 (24%), Positives = 109/298 (36%), Gaps = 91/298 (30%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+L P + +DV GCG + + G + T G +D GQ L K + P
Sbjct: 22 VLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKP 75
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
E ++V + G AH +++ + G+VY+WG DS G
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL---------------------DSDG 114
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+ L +E E + R S + ++I
Sbjct: 115 QLGLLGSE----------EYIRVPRNIKSLSD------------------------IQIV 140
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGK 269
+VA G H+L LS +V+ WG GQLGLG K +P L IP ++ AA G
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 270 DRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAVVT 305
+L G++ N G+ G + YV I CG H+A +T
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 72/298 (24%), Positives = 109/298 (36%), Gaps = 91/298 (30%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+L P + +DV GCG + + G + T G +D GQ L K + P
Sbjct: 22 VLEPRKSDFFANKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKP 75
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
E ++V + G AH +++ + G+VY+WG DS G
Sbjct: 76 EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGL---------------------DSDG 114
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+ L +E E + R S + ++I
Sbjct: 115 QLGLLGSE----------EYIRVPRNIKSLSD------------------------IQIV 140
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAASGK 269
+VA G H+L LS +V+ WG GQLGLG K +P L IP ++ AA G
Sbjct: 141 QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGA 200
Query: 270 DRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAVVT 305
+L G++ N G+ G + YV I CG H+A +T
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
>gi|224031923|gb|ACN35037.1| unknown [Zea mays]
Length = 220
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 79/205 (38%), Gaps = 60/205 (29%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ + S+SG L T+G + GQ + P ++++ + + GW H +
Sbjct: 6 CGWRHTITVSDSGNLYTYGWSK-YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTM 64
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++T G++Y WGW + FG G D + P + + P D+
Sbjct: 65 ALTSEGKLYGWGWNK----------FGQVGVGNND----DHSSPGQVSFPEDQ------- 103
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
KI++VA G RHTL LS+ V+ WG
Sbjct: 104 -----------------------------------KISQVACGWRHTLALSEKKNVFSWG 128
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCL 262
G GQLG G + TP LI L
Sbjct: 129 RGTSGQLGNGEIVDR-NTPVLIDAL 152
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + + + A GW H +
Sbjct: 58 GGWRHTMALTSEGKLYGWG-WNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTL 116
Query: 118 SVTEAGEVYTWG 129
+++E V++WG
Sbjct: 117 ALSEKKNVFSWG 128
>gi|45198474|ref|NP_985503.1| AFL045Cp [Ashbya gossypii ATCC 10895]
gi|44984425|gb|AAS53327.1| AFL045Cp [Ashbya gossypii ATCC 10895]
gi|374108732|gb|AEY97638.1| FAFL045Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 93/255 (36%), Gaps = 65/255 (25%)
Query: 21 VVYMWG----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGG-GCGFALATSESGKLITW 75
VVY WG Y G + L + R G D K + G FALA + G+L W
Sbjct: 244 VVYAWGNGQQYQLGRKIMERSRLRTLDPRAFGLDGVKYIASGENHSFALA--DDGRLFAW 301
Query: 76 GSADDEGQ----SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G + GQ + + G P LP + V AAG H + +T+ G++YT+G
Sbjct: 302 G-LNQFGQCGISNEVEDGAMVTVPTEVLLPPDVKVESIAAGEHHSIVLTQDGDLYTFGRL 360
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
+ D+ S KD GK ++P
Sbjct: 361 DMFEVGISAEDYPE--STYKDVHGKARSVPV----------------------------- 389
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---- 247
P + P K +AAG H+L ++ G ++ WG+G +GLG
Sbjct: 390 -----------PTKLKGLP--KFKAIAAGSHHSLAVARNGIIYSWGFGETYAVGLGPAGE 436
Query: 248 -----SRIKMVPTPH 257
+RIK T H
Sbjct: 437 DVEVPTRIKNTATQH 451
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+ PL T+ V AA CV + E G+VY WG C + G G +Q
Sbjct: 161 DSLPLDTQKVVQLAATDNLSCV-LFENGDVYAWGTFRC--------NEGILGFYQDAIES 211
Query: 156 KQS--ALPT-------EQAPPSDKRAGEE---VVKRRKTSSAREESENPASGDEFFTLSP 203
++S LP+ + AP D + VV + TL P
Sbjct: 212 QRSPWKLPSFSGSRIVQMAPGKDHILFLDEHGVVYAWGNGQQYQLGRKIMERSRLRTLDP 271
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPHL 258
L+ GVK +A+G H+ L+D G+++ WG GQ G+ + ++ VPT L
Sbjct: 272 RAFGLD-GVKY--IASGENHSFALADDGRLFAWGLNQFGQCGISNEVEDGAMVTVPTEVL 328
Query: 259 IP---CLEHAASGKDRPLLVRQ 277
+P +E A+G+ +++ Q
Sbjct: 329 LPPDVKVESIAAGEHHSIVLTQ 350
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 112/298 (37%), Gaps = 65/298 (21%)
Query: 72 LITWGSAD--DEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHCVSVTEAGEVYT 127
+ WG+ + G L K + P PL +A +V A G HC+++ V++
Sbjct: 53 IFVWGTGSMCELGLGPLAKNKEVKRPRLNPLLQREKAGIVSFAVGGMHCLALDSDNNVWS 112
Query: 128 WGW-------RECVPSAKVTRDFGSAGSFQKDSTGKQ-------SALPTEQAPPSDKRAG 173
WG R+ +A+ RD +A S D G + LP + P ++
Sbjct: 113 WGTNDSGALGRDTSGAAEQLRDMDAAES-SDDEDGDLNELEATPTMLPRDSLPLDTQKVV 171
Query: 174 EEVVKRRKTSSAREESENPASGDE--------FF------TLSPCLVTLNPGVKITKVAA 219
+ + E + A G F+ SP + G +I ++A
Sbjct: 172 QLAATDNLSCVLFENGDVYAWGTFRCNEGILGFYQDAIESQRSPWKLPSFSGSRIVQMAP 231
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLG----SRIKMV-PTPHLIPCLEHAASGKDRPL- 273
G H L L + G V+ WG G + QLG SR++ + P + +++ ASG++
Sbjct: 232 GKDHILFLDEHGVVYAWGNGQQYQLGRKIMERSRLRTLDPRAFGLDGVKYIASGENHSFA 291
Query: 274 LVRQGS-----VNSSGKAGRSY---------------------VKEIACGGRHSAVVT 305
L G +N G+ G S V+ IA G HS V+T
Sbjct: 292 LADDGRLFAWGLNQFGQCGISNEVEDGAMVTVPTEVLLPPDVKVESIAAGEHHSIVLT 349
>gi|340054997|emb|CCC49305.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 622
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 124/320 (38%), Gaps = 68/320 (21%)
Query: 25 WGYLPGTSPEKS------PILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGS 77
WG L ++P + +++ +P R+ + V G +A+A + + WG+
Sbjct: 236 WGQLGLSNPRNTVELSGDTVVATVPKRIPLFERQPAVHIAAGYAYAMALTADHHVYFWGN 295
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWR 131
++ GQS L G PT + +V+ + G ++++ G +Y+WG
Sbjct: 296 -NNHGQSGLGPLSFGCELRIVEEPTLVTTLEGKRIVQLSCGSFFTLALSNDGTLYSWGLL 354
Query: 132 ECVPSAKVTRDFGSAG---SFQKDSTGKQSALPTEQ----APPSDKRAGEEVVKRRKTSS 184
EC+ GSA S +DS +L E+ P R + K + ++
Sbjct: 355 ECL-------GLGSADEVRSMVRDSAIMGESLSAERRTVVLEPQVVRVPTQH-KLVRINA 406
Query: 185 AREESENPASGDEFFT-----------------LSPCLVT-LNPGVKITKVAAGGRHTLI 226
+ S + E FT L P V G + VA G HT+
Sbjct: 407 GQWHSGAISVAGELFTWGVGFQWRLGHGSNEPGLRPQRVLGALVGEHVVDVACGSFHTVA 466
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+D G+V+ WG Q G + + +V P+ + LE ASG
Sbjct: 467 LTDKGKVYCWGDNASRQCGANAIVDVVKAPYHVANLEFIASG------------------ 508
Query: 287 GRSYVKEIACGGRHSAVVTD 306
VK I+CG +H+ VV +
Sbjct: 509 ---IVKAISCGRQHTVVVVE 525
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 107/281 (38%), Gaps = 59/281 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKH-----GET-----PEPFPLPTEASVVK 108
G ++ A SE G + T+G+ D GQ L++ ++ G+T P+ PL V
Sbjct: 215 GASYSCALSEDGNVYTFGNG-DWGQLGLSNPRNTVELSGDTVVATVPKRIPLFERQPAVH 273
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG-----------------------S 145
AAG+A+ +++T VY WG S FG S
Sbjct: 274 IAAGYAYAMALTADHHVYFWGNNNHGQSGLGPLSFGCELRIVEEPTLVTTLEGKRIVQLS 333
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
GSF + L + + V+ SA E+ ++ L P +
Sbjct: 334 CGSFFTLALSNDGTLYSWGLLECLGLGSADEVRSMVRDSAI-MGESLSAERRTVVLEPQV 392
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
V + K+ ++ AG H+ +S G+++ WG G + +LG GS P L P
Sbjct: 393 VRVPTQHKLVRINAGQWHSGAISVAGELFTWGVGFQWRLGHGSN-----EPGLRP----- 442
Query: 266 ASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
R L G +V ++ACG H+ +TD
Sbjct: 443 ----QRVL----------GALVGEHVVDVACGSFHTVALTD 469
>gi|161830865|ref|YP_001597067.1| hypothetical protein COXBURSA331_A1358 [Coxiella burnetii RSA 331]
gi|161762732|gb|ABX78374.1| hypothetical protein COXBURSA331_A1358 [Coxiella burnetii RSA 331]
Length = 375
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 43/231 (18%)
Query: 62 FALATSESGKLITWGSA--------DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
+ +A + G + WG D++ + + PE P + +++ G
Sbjct: 126 YLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHP---DDYIIQVVVGD 182
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++T+ G +Y WG +G G + + + LP + P +R
Sbjct: 183 RHTLALTQLGYIYAWG----------KNSYGQLGFRDQQDRNRPALLPWNRFPGLLERND 232
Query: 174 E--EVVKRRKTSSAREESENP---------ASGDEFFTLSPCLVTLN--PGVK-----IT 215
E++ S AR E GD F P L+T N PG++ +
Sbjct: 233 RIIELIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLV 292
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPT---PHLIPCL 262
++ AG HTL ++ G ++ WG GQLGLG RI+ P P+ IP L
Sbjct: 293 ELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPNAIPPL 343
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 40/142 (28%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-----VPTPHLIPCLEH- 264
V I ++ + RH IL++ G ++GWG+ G+LGLG R + +P LE
Sbjct: 55 NVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERG 114
Query: 265 ----AASGKDRPLLVR--QGSV-----NSSGKAG-----------------------RSY 290
+ DR L+ R QG V N G+ G Y
Sbjct: 115 DRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDY 174
Query: 291 VKEIACGGRHSAVVTDMSYPIA 312
+ ++ G RH+ +T + Y A
Sbjct: 175 IIQVVVGDRHTLALTQLGYIYA 196
>gi|328874090|gb|EGG22456.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 464
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 121/319 (37%), Gaps = 61/319 (19%)
Query: 18 KETVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDV--CGGGCGFALATSE 68
++ ++MWG LPG + P S + L D+ G F L ++
Sbjct: 121 NDSKIFMWGTNNHGQMGLPGNQVYRYPTESEMFKGL-------DIERVALGRSFLLILTK 173
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
GK+++ GS ++ GQ ++S + + + VV AG+ H +VT++G + W
Sbjct: 174 QGKVLSIGS-NEFGQLGISSQEQRGSQTLQVVQNLKDVVSMHAGFDHSFAVTKSGHAFGW 232
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-----GEEVVKRRKTS 183
G+ + ++ + ++ L P ++ G E +K K
Sbjct: 233 GYNVEGQLGQKIVEYERVEATGEEKQQDMHDLHKTMHPDAEYNTPTLVPGMEAIKVAKVF 292
Query: 184 ---------SAR--------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
SAR E+ G++ + KI ++ G H++
Sbjct: 293 CGYDCTFLLSARGNVYAMGNNETGTLGLGEDAIGRIAKATKVQLPEKIKSISCGATHSMF 352
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
LS+ +V+ G+G EG+LGLG+ P LIP
Sbjct: 353 LSESNKVYVCGWGAEGRLGLGNNTINRYVPTLIPFFAE---------------------- 390
Query: 287 GRSYVKEIACGGRHSAVVT 305
R V +++CGG HS ++T
Sbjct: 391 NRIKVDQVSCGGAHSLLLT 409
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K+ +V+ GG H+L+L+ G+V+ WG G +G+LG G ++ P LI E+ +
Sbjct: 393 IKVDQVSCGGAHSLLLTTDGRVYSWGCGEDGKLGHGDE-ELSNDPKLIQFFENK-----K 446
Query: 272 PLLVRQG 278
P+ + G
Sbjct: 447 PIFISAG 453
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 88/245 (35%), Gaps = 86/245 (35%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E PEP + V + G H V+V G+V+ WG GS G
Sbjct: 63 ERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG-------------AGSEGQLGIG 109
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+ S +PT+ + G+
Sbjct: 110 EFKEISFMPTK------------------------------------------IKALAGI 127
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP----TPHLIPCLEHAA 266
KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P + IP + AA
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187
Query: 267 SGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------------IACGGRHS 301
G L G+ N SG+ S VKE I+CG H+
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 302 AVVTD 306
AV+T+
Sbjct: 248 AVLTE 252
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 47/263 (17%)
Query: 40 SPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
SP+ R + +++ G CG +LA + G + WGS D GQ + K+ + P
Sbjct: 152 SPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSD-GQIGDGTLKNRQNPRQ 210
Query: 98 ---FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
F P A V AAG+AH ++++ G V+ WG +FG G D +
Sbjct: 211 VMRFGKPL-AGVKAVAAGFAHSLALSVDGTVWAWG----------DNEFGQLG----DCS 255
Query: 155 GKQSALPTEQAPPSDKRAGEEVVK----RRKTSSAREESENPASGD-----------EFF 199
P Q S R + VV R + + + E A G+ F
Sbjct: 256 DYDRKAPV-QVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNNGVGQLGMGPHNGF 314
Query: 200 TLSPCLVTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK----M 252
P V GV + + A GRH+L L + G V WG G GQLG G++
Sbjct: 315 VRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQLGQGAQNHEDHPT 374
Query: 253 VPTPHLIPCLEHAASGKDRPLLV 275
+ + H + CL A+G+ L V
Sbjct: 375 LASLHSVICL---AAGRYHSLAV 394
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 16/110 (14%)
Query: 200 TLSPCLVTLNPGVKIT---KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--------S 248
+LSP V G + KVAAG RH+L L+ G+VW WG +GQLG G
Sbjct: 95 SLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPV 154
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE 293
+++ + T L + A GK + G+V NS G+ G +K
Sbjct: 155 KVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKN 204
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 69/197 (35%), Gaps = 57/197 (28%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAA 111
+ GG +L G + WG + GQ + + K +P + A V+K AA
Sbjct: 59 IAAGGGYHSLVVKNDGTVWAWGD-NSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAA 117
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +++T GEV+TWG +S G+
Sbjct: 118 GERHSLALTAKGEVWTWG---------------------DNSKGQL-------------- 142
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+RR R NP I A GG+H+L ++ G
Sbjct: 143 GDGFFYERRSPVKVRHIRTNPLE------------------NIVGAACGGKHSLAVASDG 184
Query: 232 QVWGWGYGGEGQLGLGS 248
VW WG +GQ+G G+
Sbjct: 185 TVWAWGSNSDGQIGDGT 201
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDV--CGGGCGFALATSESGKLITW 75
V+ WG G P + P+P R G K V +LA G ++ W
Sbjct: 295 VWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAW 354
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G A D GQ + H + P L + SV+ AAG H ++V E G V WG
Sbjct: 355 G-AGDRGQLGQGAQNHEDHPT---LASLHSVICLAAGRYHSLAVAENGAVLAWG 404
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 34/123 (27%)
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPTPHLIPCLEHAASGK 269
A GG H+L++ + G VW WG GQLG+G+ R+ L L+ AA +
Sbjct: 61 AGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGER 120
Query: 270 DRPLLVRQGSV-----NSSGKAGRSYVKE--------------------IACGGRHS-AV 303
L +G V NS G+ G + E ACGG+HS AV
Sbjct: 121 HSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAV 180
Query: 304 VTD 306
+D
Sbjct: 181 ASD 183
>gi|429850121|gb|ELA25421.1| ran exchange factor prp20 pim1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 430
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 103/255 (40%), Gaps = 59/255 (23%)
Query: 60 CGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHC 116
GFAL + +GK+ WGS A +G K +T E P +P + + A G H
Sbjct: 158 AGFAL--TAAGKVYGWGSFAGGDGNFGFLREKPPKTTERLPVLIPGLTDIKELAGGSDHI 215
Query: 117 VSVTEAGEVYTWG----------------------WRECVPSAKVTRDF-GSAGSFQKDS 153
+++T G V+ WG R +P K + F GS SF D+
Sbjct: 216 LALTNDGNVFAWGSGEQNELGRRILARRRFETLVPQRVGLPKNKTAKIFAGSHHSFAIDT 275
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT--LSPCLVTLNPG 211
TGK A G+ + R+ D FT +SP ++ G
Sbjct: 276 TGKVWAFGLNNF-------GQCGISTRE--------------DTGFTTVISPTVIKSLEG 314
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
K+ + G HT+ ++ G+V WG +GQ+G+ ++ +P H+I +DR
Sbjct: 315 YKVRHIGCGLHHTVACTEEGEVLVWGRADDGQMGMP--LETLPEDHII------FDSRDR 366
Query: 272 PLLVRQGSVNSSGKA 286
P ++ +V KA
Sbjct: 367 PRVLNVPAVVPDLKA 381
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 65/244 (26%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHG----------------ETPEPFPLPTEASVV 107
+A + GK++TWG DD + S TPE E VV
Sbjct: 91 VALTHDGKVLTWGVNDDGALGRVKSTSKSEAEAEEDEEDILNPFESTPEAVNFEEEIDVV 150
Query: 108 KAAAGWAHCVSVTEAGEVYTWG-----------WRE-----------CVPSAKVTRDF-- 143
+ AA + ++T AG+VY WG RE +P ++
Sbjct: 151 QVAATNSAGFALTAAGKVYGWGSFAGGDGNFGFLREKPPKTTERLPVLIPGLTDIKELAG 210
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
GS + G A + + G ++ RR+ F TL P
Sbjct: 211 GSDHILALTNDGNVFAWGSGE----QNELGRRILARRR----------------FETLVP 250
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR----IKMVPTPHLI 259
V L P K K+ AG H+ + G+VW +G GQ G+ +R V +P +I
Sbjct: 251 QRVGL-PKNKTAKIFAGSHHSFAIDTTGKVWAFGLNNFGQCGISTREDTGFTTVISPTVI 309
Query: 260 PCLE 263
LE
Sbjct: 310 KSLE 313
>gi|356526548|ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 474
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 134/319 (42%), Gaps = 69/319 (21%)
Query: 18 KETVVYMWGY----LPGTSPEKSPILSP--IPARLCG-----GDSWKDVCGGGCG--FAL 64
+++ +Y+WGY G ++ + P +P L G W DV CG
Sbjct: 17 RKSAIYVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNACWLDV---ACGREHTA 73
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC-VSVTEAG 123
A + G L TWG A+D GQ + + + PE E+ VK+ + AHC + E
Sbjct: 74 AIASDGSLFTWG-ANDFGQLGDGTEERRKHPEKVK-QLESEFVKSVSCGAHCSACIAEPR 131
Query: 124 E---------VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ-SALPTEQAPPSDKRAG 173
E ++ WG + + + R F G+F+ ++ ++ S SD+
Sbjct: 132 ENDGSISTRRLWVWGQNQ---GSNLPRLF--WGAFKPNTIIREVSCGAVHVVALSDEGLL 186
Query: 174 EE-------VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + R T + + +S +F +P LV KI KV+ G HT
Sbjct: 187 QAWGYNECGQLGRGVTCEGLQGAHIISSYAKFLDEAPELV------KIAKVSCGEYHTAA 240
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+SD G+V+ WG G GQLG S L++ D+ LL R+ V G
Sbjct: 241 ISDKGEVYTWGLGNMGQLGHSS-------------LQYG----DKELLPRR-VVTLDG-- 280
Query: 287 GRSYVKEIACGGRHSAVVT 305
++K++ACGG H+ +T
Sbjct: 281 --IFIKDVACGGVHTCALT 297
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 88/230 (38%), Gaps = 53/230 (23%)
Query: 95 PEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
PE F P T A + A G H ++ G ++TWG DFG G D
Sbjct: 49 PELFGCPAGTNACWLDVACGREHTAAIASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKR-----RKTSSAREESENPAS---------GDEF 198
T ++ + P K+ E VK ++ E EN S G
Sbjct: 95 GTEER-----RKHPEKVKQLESEFVKSVSCGAHCSACIAEPRENDGSISTRRLWVWGQNQ 149
Query: 199 FTLSPCLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+ P L P I +V+ G H + LSD G + WGY GQLG G + +
Sbjct: 150 GSNLPRLFWGAFKPNTIIREVSCGAVHVVALSDEGLLQAWGYNECGQLGRGVTCEGLQGA 209
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
H+I +A + P LV+ + +++CG H+A ++D
Sbjct: 210 HIIS--SYAKFLDEAPELVK--------------IAKVSCGEYHTAAISD 243
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 10/190 (5%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A +E G + TWG + S + P P + +V +AG +H +VTE+G
Sbjct: 148 IALTEVGNVYTWGYGAFGALGH-GSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESG 206
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
E+YTWG E + G+ + + + + + P + G S
Sbjct: 207 ELYTWGRDE----GEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKS 262
Query: 184 SAR-----EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ G P +V V + +VA GG H L+ G+V WGY
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGY 322
Query: 239 GGEGQLGLGS 248
GG GQLG G+
Sbjct: 323 GGNGQLGHGT 332
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 85/223 (38%), Gaps = 48/223 (21%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRDF 143
+P+ P V A+AG H +++TE G VYTWG+ RE +P ++
Sbjct: 127 KPYVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP--RLLEGP 184
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
+ G SA TE +GE R R NP DE P
Sbjct: 185 WKDRIVHVSAGGSHSAAVTE--------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRP 236
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V V I V GG T+ L+ GQ+W WG +LG G+R P ++ LE
Sbjct: 237 TKVQALD-VPIASVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNW-KPKVVAALE 294
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
D L+ ++ACGG H+A +T
Sbjct: 295 ------DVTLV------------------QVACGGFHAAALTQ 313
>gi|164685942|ref|ZP_01946867.2| hypothetical protein A35_A1226 [Coxiella burnetii 'MSU Goat Q177']
gi|164601463|gb|EAX32495.2| hypothetical protein A35_A1226 [Coxiella burnetii 'MSU Goat Q177']
Length = 375
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 43/231 (18%)
Query: 62 FALATSESGKLITWGSA--------DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
+ +A + G + WG D++ + + PE P + +++ G
Sbjct: 126 YLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHP---DDYIIQVVVGD 182
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++T+ G +Y WG +G G + + + LP + P +R
Sbjct: 183 RHTLALTQLGYIYAWG----------KNSYGQLGFRDQQDRNRPALLPWNRFPGLLERND 232
Query: 174 E--EVVKRRKTSSAREESENP---------ASGDEFFTLSPCLVTLN--PGVK-----IT 215
E++ S AR E GD F P L+T N PG++ +
Sbjct: 233 RIIELIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLV 292
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPT---PHLIPCL 262
++ AG HTL ++ G ++ WG GQLGLG RI+ P P+ IP L
Sbjct: 293 ELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPNAIPPL 343
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 40/142 (28%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-----VPTPHLIPCLEH- 264
V I ++ + RH IL++ G ++GWG+ G+LGLG R + +P LE
Sbjct: 55 NVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGYRFERSQPTELPQNFFPYLLERG 114
Query: 265 ----AASGKDRPLLVR--QGSV-----NSSGKAG-----------------------RSY 290
+ DR L+ R QG V N G+ G Y
Sbjct: 115 DRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDY 174
Query: 291 VKEIACGGRHSAVVTDMSYPIA 312
+ ++ G RH+ +T + Y A
Sbjct: 175 IIQVVVGDRHTLALTQLGYIYA 196
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 91/223 (40%), Gaps = 35/223 (15%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTEAGEVY 126
S ++ WG +D GQ L G ++ EP LPT +V AAG H V++T AG V
Sbjct: 53 SDAILAWG-GNDGGQ--LGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVL 109
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR------AGEEVVKRR 180
WG G G+ S+G+ P + PS R + +
Sbjct: 110 AWGRNT----------EGQLGNGTTTSSGE----PVAVSLPSGIRIVAVAVGADHSLALT 155
Query: 181 KTSSAREESENPAS--GDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDMG--QVW 234
T S N GD T S P V L P + +AAG H L+L+ G +
Sbjct: 156 STGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALL 215
Query: 235 GWGYGGEGQLGLGSRI-KMVPTPHLIP---CLEHAASGKDRPL 273
WG EGQLG G+ + + P P +P + A G+D L
Sbjct: 216 AWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSL 258
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 23/231 (9%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP- 99
PI RL G + V G ++A + +G ++ WG + EGQ L +G + EP
Sbjct: 78 PIAVRLPTGTTVAAVAAGDR-HSVALTSAGTVLAWGR-NTEGQ--LGNGTTTSSGEPVAV 133
Query: 100 -LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
LP+ +V A G H +++T G + WG + T G GS ST
Sbjct: 134 SLPSGIRIVAVAVGADHSLALTSTGSLLAWGSND-------TGQLGD-GSVTSSSTPVAV 185
Query: 159 ALP--TEQAPPSDKRAGEEVVKRRKTSS-----AREESENPASGDEFFTLSPCLVTLNPG 211
LP T A + R V+ ++ A E + G P V L G
Sbjct: 186 RLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQ-LGDGTVVDRSRPVPVNLPTG 244
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPC 261
+ +T +A G H+L L+ V WG GQLG G+ ++P ++P
Sbjct: 245 LTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLPV 295
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 76/207 (36%), Gaps = 37/207 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + +G L+ WGS +D GQ S TP LP +V AAG H +
Sbjct: 147 GADHSLALTSTGSLLAWGS-NDTGQLGDGSVTSSSTPVAVRLPPNTTVAAIAAGRDHNLV 205
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T G W G+ ++ G + + + P + G V
Sbjct: 206 LTATGPAALLAW----------------GANREGQLGDGTVVDRSRPVPVNLPTGLTVTA 249
Query: 179 RRKTSSAREESENPASGDEFF-----------------TLSPCLVTLNPGVKITKVAAGG 221
+ R+ S S D +L P V L G + T +AAG
Sbjct: 250 ---IAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTVVLPVGAEATAIAAGR 306
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGS 248
H+L L+ G WG GQLG GS
Sbjct: 307 LHSLALTSDGTALAWGGNHWGQLGNGS 333
>gi|85094575|ref|XP_959911.1| hypothetical protein NCU02267 [Neurospora crassa OR74A]
gi|28921368|gb|EAA30675.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|40804620|emb|CAF05880.1| conserved hypothetical protein [Neurospora crassa]
Length = 606
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 119/303 (39%), Gaps = 66/303 (21%)
Query: 22 VYMWGYLPG--TSPEKSPILSPIPARLCGGDS--WKDVCGGGCGFALATSESGKLITWGS 77
VY WG G +P+ + ++ P R+ D +D+ F A E G L+ WG
Sbjct: 119 VYAWGSNVGKVVAPDSNELVIKTPRRIAYFDDQVLRDL-KLDSNFGAAIDEKGNLVQWGV 177
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
D+ T G+ +VK + + GEVY+ +P A
Sbjct: 178 GFDKDHYKPTVTLKGK-----------DLVKLDLSRDRIIGLASNGEVYS------IPVA 220
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAP-------PSDKRAGEEVVKRRK--------T 182
+ G QK++T S+L + QAP P + R GE++V R T
Sbjct: 221 AADQRAG-----QKETTASPSSLWSSQAPVNYRPLTPKNLRWGEKIVDVRSGLEHCLMLT 275
Query: 183 SSAREESENPASGDEFFTL-------------------SPCLVTLNPGVKITKVAAGGRH 223
S+ R S AS ++F + P VT G KI ++AAG H
Sbjct: 276 SNGRVFSA-AASSEDFPSKGQLGVPGLTWTNRPAGPYDQPHEVTGLSGSKIKEIAAGDYH 334
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIK--MVPTPHLIPC--LEHAASGKDRPLLVRQGS 279
+L L G+V+ +G GQLG + + V +P +P L H + + + + G
Sbjct: 335 SLALDTEGRVYAFGDNSFGQLGFENDTEHPYVDSPRPVPINKLYHGTNLRPKVTYIAAGG 394
Query: 280 VNS 282
NS
Sbjct: 395 PNS 397
>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
Length = 821
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSV 119
++ A + +G + TWGS + Y+ K P+P L T V + + G+ H ++
Sbjct: 312 YSAALTSNGNVYTWGSGEFGRLGYMDIKKQ---PQPKVLKELTGFQVTRISLGYYHGAAI 368
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE---- 175
TE G+V++WG + G +D SAL + D GE
Sbjct: 369 TEQGQVFSWG-------RGINGQLGHGSVLNEDQVRPVSAL--QNIHIIDISCGESHTLA 419
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ + + S +F S + N I +++AG RH+ L+D G+++
Sbjct: 420 LTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALTDDGKLFT 479
Query: 236 WGYGGEGQLG 245
WG GQLG
Sbjct: 480 WGSNEYGQLG 489
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 25/96 (26%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G ++T+++ G H +++ GQV+ WG G GQLG GS + +
Sbjct: 352 GFQVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLN---------------EDQV 396
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
RP+ Q ++ +I+CG H+ +T+
Sbjct: 397 RPVSALQN----------IHIIDISCGESHTLALTN 422
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 113/301 (37%), Gaps = 68/301 (22%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE 81
+Y WG L E +L P L G G A A G + WG
Sbjct: 56 MYCWGLLG--LGETLDVLYPQKVNLEG----VTCVSAGHRHAAAIVGGGDVFVWGRGFS- 108
Query: 82 GQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
GQ L + K TP+P FP+P +A + G +H + +TE G +Y G
Sbjct: 109 GQLGLGTNKSHFTPQPLSFPMPVKA----LSCGGSHSLFITEDGRLYATGR--------- 155
Query: 140 TRDFGSAGSFQKDSTGKQSAL--PTE-QAPPSDKRAGEEVVKRRKTSSAREESENPASG- 195
G G TG Q ++ P E Q P R + + A E + G
Sbjct: 156 ----GKEGQL---GTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGS 208
Query: 196 DEF----------FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
D++ + ++P V + G + +AAG H ++ G+++ WGYG GQLG
Sbjct: 209 DDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLG 268
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G+ + + P+LVR+ V+ +ACG H+ V
Sbjct: 269 NGNTVDV-----------------SLPVLVRE--------LQNLRVQSVACGCDHTVAVI 303
Query: 306 D 306
D
Sbjct: 304 D 304
>gi|29654520|ref|NP_820212.1| hypothetical protein CBU_1217 [Coxiella burnetii RSA 493]
gi|29541787|gb|AAO90726.1| hypothetical membrane spanning protein [Coxiella burnetii RSA 493]
Length = 497
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 43/231 (18%)
Query: 62 FALATSESGKLITWGSA--------DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
+ +A + G + WG D++ + + PE P + +++ G
Sbjct: 248 YLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHP---DDYIIQVVVGD 304
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++T+ G +Y WG +G G + + + LP + P +R
Sbjct: 305 RHTLALTQLGYIYAWG----------KNSYGQLGFRDQQDRNRPALLPWNRFPGLLERND 354
Query: 174 E--EVVKRRKTSSAREESENP---------ASGDEFFTLSPCLVTLN--PGVK-----IT 215
E++ S AR E GD F P L+T N PG++ +
Sbjct: 355 RIIELIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLV 414
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPT---PHLIPCL 262
++ AG HTL ++ G ++ WG GQLGLG RI+ P P+ IP L
Sbjct: 415 ELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPNAIPPL 465
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 40/142 (28%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-----VPTPHLIPCLEH- 264
V I ++ + RH IL++ G ++GWG+ G+LGLG R + +P LE
Sbjct: 177 NVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERG 236
Query: 265 ----AASGKDRPLLVR--QGSV-----NSSGKAG-----------------------RSY 290
+ DR L+ R QG V N G+ G Y
Sbjct: 237 DRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDY 296
Query: 291 VKEIACGGRHSAVVTDMSYPIA 312
+ ++ G RH+ +T + Y A
Sbjct: 297 IIQVVVGDRHTLALTQLGYIYA 318
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 93/254 (36%), Gaps = 47/254 (18%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P PA GD LA G + WG G L +G + P +
Sbjct: 145 PAPAVSAAGD-----------HTLALRRDGTVWAWGF---NGSGQLGNGTATDRATPVQV 190
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P SV+ AA AH +++ G V+ WG +G G D T Q
Sbjct: 191 PGLTSVMAVAASEAHSLALRSDGTVWAWG----------DNGYGQLG----DGTKAQRTT 236
Query: 161 PTEQAPPSDKRA------GEEVVKRRKTSSAREES------ENPAS--GDEFFTLSPCLV 206
P + + A G V + + R + +N A GD T V
Sbjct: 237 PVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPV 296
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-- 264
+ +T +AAG H+L L D G VW WG GQLG G+ PTP +P L
Sbjct: 297 QVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTAR-PTPVQVPGLTSVI 355
Query: 265 --AASGKDRPLLVR 276
AA G D L +R
Sbjct: 356 AVAAGGGDDSLGMR 369
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 100/253 (39%), Gaps = 38/253 (15%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P ++ L+ I A L GDS +LA +G + TWGS + GQ L G
Sbjct: 504 PVQATGLASISA-LAAGDS----------HSLALRGNGSVWTWGS-NAYGQ--LGDGTAI 549
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+ +P + AAG H +++ G V+ WG + DFG G D
Sbjct: 550 DRATAAQVPGLTDITALAAGNHHSLALRNDGTVWVWG----------SNDFGQLG----D 595
Query: 153 STGKQSALPTEQAPPSDKRAGEE------VVKRRKTSSAREESENPASGDEFFTLSPCLV 206
T P + + S RA E V T ++ GD T V
Sbjct: 596 GTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPV 655
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA- 265
++ +T VA G H+L L + G +W WGY GQLG G+ + TP +P L
Sbjct: 656 QVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTS-GIQSTPAQVPGLTGVI 714
Query: 266 --ASGKDRPLLVR 276
A+G L +R
Sbjct: 715 ALAAGNGHSLALR 727
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 79/204 (38%), Gaps = 24/204 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G L WG ++ GQ L +G G P +P V+ AAG H ++
Sbjct: 669 GVYHSLALRNDGTLWAWGY-NNVGQ--LGNGTSGIQSTPAQVPGLTGVIALAAGNGHSLA 725
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE--- 175
+ G V+ WG FG G D T + PT+ ++ A
Sbjct: 726 LRTDGTVWGWG----------ANSFGQLG----DGTTTPRSTPTQVPGLTNVIALNAGAF 771
Query: 176 -VVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
V R S E A GD T V ++ +T +AAG H L L
Sbjct: 772 YTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTDVTALAAGNAHALALRTDRT 831
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTP 256
VW WG GQ+G G+ ++P P
Sbjct: 832 VWAWGGNQRGQIGDGTA-SIMPAP 854
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 84/213 (39%), Gaps = 34/213 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G + WGS +D GQ L G P + +++ AG AH V+V
Sbjct: 573 SLALRNDGTVWVWGS-NDFGQ--LGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLN 629
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V+ WG DFG G D T A+P + + + A V +
Sbjct: 630 GTVWVWG----------NNDFGQLG----DGTVTSRAMPVQVSGLTGVTA--VAVGVYHS 673
Query: 183 SSAREESE----------NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMG 231
+ R + +G +P V PG+ + +AAG H+L L G
Sbjct: 674 LALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQV---PGLTGVIALAAGNGHSLALRTDG 730
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
VWGWG GQLG G+ TP +P L +
Sbjct: 731 TVWGWGANSFGQLGDGTTTPR-STPTQVPGLTN 762
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPL 273
V+A G HTL L G VW WG+ G GQLG G+ R V P L + AAS
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMAVAASEAHSLA 208
Query: 274 LVRQGSVNSSGKAG 287
L G+V + G G
Sbjct: 209 LRSDGTVWAWGDNG 222
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 25/235 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA---- 114
G +LA + G + WG+ + GQ L G P P +P SV+ AAG
Sbjct: 310 GAFHSLALRDDGTVWAWGN-NSSGQ--LGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSL 366
Query: 115 -----HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS- 168
H +++ G V+ WG+ ++R FG + + + S L A +
Sbjct: 367 GMRGDHSLALKSDGTVWAWGY-------NLSRQFGDGMPATRTTPVQVSELTGGTALVAG 419
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
D A V+K T A ++ + G+ + + ++ IT +A G H++ +
Sbjct: 420 DLHA--VVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVG 477
Query: 229 DMGQVWGWGYGGEGQLGLG-SRIKMVPTPHL-IPCLEHAASGKDRPLLVR-QGSV 280
G +W WG GQLG+G + + +P + + A+G L +R GSV
Sbjct: 478 SDGGIWAWGDNRRGQLGIGITATREIPVQATGLASISALAAGDSHSLALRGNGSV 532
>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
Length = 1038
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 103/265 (38%), Gaps = 34/265 (12%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P L GG + + G +A ++ G+L WGS + GQ L S T P + +
Sbjct: 114 PVLLSGGVNIVQIAAGR-AHNMAVADDGRLFAWGS-NSHGQLALPSNI-TSTDIPKRVVS 170
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V+ A G H +++ E+G ++ WG + P +V F ALP
Sbjct: 171 LTETVQVACGTDHTIAIVESGRIFVWGLQ---PDGRVLYAPKEIEFFM--------ALPV 219
Query: 163 EQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFFTLSPCLVTLNPGVKITKV 217
Q AG + S A E + D +P VT + + V
Sbjct: 220 VQV-----NAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHV 274
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPHLIPCLEHAASGKDRP 272
A G HT+ L+ G+++ G GQLG G ++ + T L + A G+
Sbjct: 275 ACGHSHTVALTHEGRLFVCGSDSCGQLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHT 334
Query: 273 LLVRQGS-----VNSSGKAGRSYVK 292
L + G +NSSG+ G V+
Sbjct: 335 LALAGGKMYAFGLNSSGQLGSGNVR 359
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
FT+ P L L+ GV I ++AAG H + ++D G+++ WG GQL L S I P
Sbjct: 110 FTIYPVL--LSGGVNIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKR 167
Query: 259 IPCLE---HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
+ L A G D + + + +GR +V + GR
Sbjct: 168 VVSLTETVQVACGTDHTIAIVE--------SGRIFVWGLQPDGR 203
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA 266
T + GV + +A G RHTL L+D G+VW G G+LG G C E
Sbjct: 63 TSHDGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGG------------CQE--G 108
Query: 267 SGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
S P+L+ G AGR++ +A GR
Sbjct: 109 SFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGR 141
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 100/252 (39%), Gaps = 26/252 (10%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG A A + +G+L +WGS + EGQ L T K+ P+ + A G H
Sbjct: 170 ACGMKHAFALTNNGELYSWGS-NSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYH 228
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-APPSDKRAGE 174
++++++G V+ WG FG G L T Q A GE
Sbjct: 229 SIAISKSGAVFGWG----------KNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGE 278
Query: 175 E-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL-S 228
E V + G + P V G +T+++ G RHTL L
Sbjct: 279 EFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVP 338
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+V+ WG GG GQLG S + V TP ++ A +G + +Q + + G
Sbjct: 339 SRGRVYAWGLGGAGQLGNHS-TRSVTTPQVVHGPWIAPNGSTIMDVNKQFNSRTIG---- 393
Query: 289 SYVKEIACGGRH 300
VK I GG H
Sbjct: 394 YIVKHIFTGGDH 405
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 27/104 (25%)
Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ L PG+ K A G HTL +++ GQ++ WG EGQLGL S+ M +P ++ L
Sbjct: 102 LQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTL 161
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G S V +IACG +H+ +T+
Sbjct: 162 ------------------------GTSVVVQIACGMKHAFALTN 181
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 73/192 (38%), Gaps = 59/192 (30%)
Query: 58 GGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWA 114
CG LA +E G+L +WGS + EGQ L S E+ P + VV+ A G
Sbjct: 116 AACGAYHTLAINEWGQLFSWGS-NTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMK 174
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H ++T GE+Y S+ +S G Q L T
Sbjct: 175 HAFALTNNGELY---------------------SWGSNSEG-QLGLGT------------ 200
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
D + + P ++ G+ I +A GG H++ +S G V+
Sbjct: 201 ---------------------DIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVF 239
Query: 235 GWGYGGEGQLGL 246
GWG GQLGL
Sbjct: 240 GWGKNTFGQLGL 251
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 41/183 (22%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS------ 148
P A + + A G + V +T+ GE+Y+ G D+G G
Sbjct: 52 PRELDFKKAAEIQQIACGENYTVVITQIGEIYSCG----------NNDYGQLGHEKGRKR 101
Query: 149 -----------FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
F+K + G L + + + + E + +
Sbjct: 102 LQLIPGLDAFVFKKAACGAYHTLAINEW------------GQLFSWGSNTEGQLGLNSKN 149
Query: 198 FFTLSPCLV-TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
F SP +V TL V + ++A G +H L++ G+++ WG EGQLGLG+ IK P
Sbjct: 150 FMESSPRMVKTLGTSV-VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKP 208
Query: 257 HLI 259
I
Sbjct: 209 KFI 211
>gi|356560879|ref|XP_003548714.1| PREDICTED: uncharacterized protein LOC100814063 [Glycine max]
Length = 1080
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 73/174 (41%), Gaps = 37/174 (21%)
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF---QKDSTGKQSALPTEQAP 166
+AG H V++T GEVYTWG FG G D Q+A+ T
Sbjct: 193 SAGKFHSVALTARGEVYTWG-------------FGRGGRLGHPDFDIHSGQAAVIT---- 235
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT--------LSPCLVTLNPG------- 211
P +G + ++A+ + G E FT L V P
Sbjct: 236 PRQVTSGLGSRRVMAIAAAKHHTVISTQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSL 295
Query: 212 -VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLE 263
+I VAA +HT ++SD+G+V+ WG EGQLG G S TPH++ L+
Sbjct: 296 RSRIVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLK 349
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 33/147 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG-----LGS 248
+G+ PC V G I ++AG H++ L+ G+V+ WG+G G+LG + S
Sbjct: 169 TGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHS 228
Query: 249 RIKMVPTPHLIPC------LEHAASGKDRPLLVRQG------SVNSSGKAG--------- 287
V TP + + A+ K ++ QG N G+ G
Sbjct: 229 GQAAVITPRQVTSGLGSRRVMAIAAAKHHTVISTQGGEVFTWGSNREGQLGYPSVDTQPT 288
Query: 288 -------RSYVKEIACGGRHSAVVTDM 307
RS + +A +H+AVV+D+
Sbjct: 289 PRRVSSLRSRIVAVAAANKHTAVVSDL 315
>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
Length = 942
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 100/249 (40%), Gaps = 39/249 (15%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP----LPTEASVVKAAAGWAHCVSV 119
LA S+ G + WG ++ GQ + EP P L V + +AG H +++
Sbjct: 356 LALSDRGTMFAWG-GNEYGQCGSVLPGQRDITEPMPVDLGLGPSQRVRQVSAGGMHSLAL 414
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE----- 174
E G V+ WG + DF S + T + A+ ++ + G
Sbjct: 415 LEDGMVWQWG--------ENWGDF----SMRPVRTPRPVAVHPDEGGVAAVSCGAFHNLA 462
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ R S + +G + +P V GV + +AAGG H+ LS G+VW
Sbjct: 463 LTAQGRVLSWGMNDYGQLGNGSTTYATTPRPVLDMEGVVVADIAAGGWHSCALSSAGEVW 522
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVR--QGSVNSSGKAGRSYVK 292
WG G G+LGLG R + S K RP VR + V G+ + +
Sbjct: 523 VWGRGEYGRLGLGDR---------------SGSSKLRPQKVRGLESHVVVQGRWVMAEGQ 567
Query: 293 EIACGGRHS 301
E GGRHS
Sbjct: 568 EERGGGRHS 576
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 42/218 (19%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P+ P +V+ A G HC+++++ G ++ WG E +G GS
Sbjct: 334 PKRIPALKGIRIVQVAIGGWHCLALSDRGTMFAWGGNE----------YGQCGSVLPGQR 383
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTLSPCL----VTL 208
+P + +R + + + E+ G+ + F++ P V +
Sbjct: 384 DITEPMPVDLGLGPSQRVRQVSAGGMHSLALLEDGMVWQWGENWGDFSMRPVRTPRPVAV 443
Query: 209 NPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
+P + V+ G H L L+ G+V WG GQLG GS TP
Sbjct: 444 HPDEGGVAAVSCGAFHNLALTAQGRVLSWGMNDYGQLGNGS-TTYATTP----------- 491
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
RP+L +G V V +IA GG HS ++
Sbjct: 492 ---RPVLDMEGVV----------VADIAAGGWHSCALS 516
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 12 EKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGK 71
+ ++ +V+ WG G + P+ +P P + + G LA + G+
Sbjct: 410 HSLALLEDGMVWQWGENWGDFSMR-PVRTPRPVAVHPDEGGVAAVSCGAFHNLALTAQGR 468
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK--AAAGWAHCVSVTEAGEVYTWG 129
+++WG +D GQ S + TP P L E VV AA GW C +++ AGEV+ WG
Sbjct: 469 VLSWG-MNDYGQLGNGSTTYATTPRPV-LDMEGVVVADIAAGGWHSC-ALSSAGEVWVWG 525
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 84/199 (42%), Gaps = 29/199 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA S G + WG D G L G P +P A VV AAG H ++
Sbjct: 810 GALFSLALSCDGGVWAWG---DNGSGQLGDGAVTARTAPARVPGLAHVVAIAAGSDHALA 866
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ-KDSTGKQSALPTEQAPPSDKRA----- 172
V G V+ WG + GS Q D T A+P + D A
Sbjct: 867 VRADGTVWAWG---------------ANGSGQLGDGTTTSRAVPMQVKELVDVVAVAGGS 911
Query: 173 GEEV-VKRRKTSSAREESENPASGDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSD 229
G + V+ T A + + GD T P V+ GV+ +A+G +H+L L++
Sbjct: 912 GHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQ--AIASGAQHSLALAE 969
Query: 230 MGQVWGWGYGGEGQLGLGS 248
G VW WG G GQLG G+
Sbjct: 970 GGVVWAWGANGSGQLGDGT 988
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 87/223 (39%), Gaps = 13/223 (5%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFP 99
P PA++ G ++ G +LA G + TWG D L +G P P
Sbjct: 491 PSPAQVPGVAGATEIAAG-TYHSLALRSDGTVWTWG---DNSYGQLGAGATPRGPRAPAV 546
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+P A + AAG H +++ +G+V+ WG V G + ++ G+ S
Sbjct: 547 VPGLAVITHVAAGLFHSLALDSSGQVWAWG-------DNVYGQLGDGSTTSRNVPGRVSG 599
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
LP + + + E+ N GD T P ++ + ++
Sbjct: 600 LPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPATLVALST 659
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
G HT+ L G +W WG GQLG G+ + TP +P
Sbjct: 660 RGSHTVALDTTGMLWAWGRNVSGQLGNGTLVSE-STPRRVPSF 701
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 103/277 (37%), Gaps = 30/277 (10%)
Query: 11 NEKMEECKETVVYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
N + V+ WG G E S + P ++ G V G ++A E
Sbjct: 58 NHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAVAAGNT-HSMALREE 116
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEV 125
G + TWG+ D G+ G+ +P + + V AAG H +++ G V
Sbjct: 117 GTVWTWGTNTD--------GQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLALIN-GAV 167
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
+ WG T G S + + K + L TE + +KR T A
Sbjct: 168 WAWG-------NNTTGQLGDGSSTSRSTPAKVAGL-TEVVAIAAGDFHSLALKRDGTVWA 219
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM---GQVWGWGYGGEG 242
+ + GD V ++ I +A GG H++ S G+VW WG G
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYG 279
Query: 243 QLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPLLVR 276
QLG G + + P +P L ASG L +R
Sbjct: 280 QLGNGGDVSSL-LPLEVPGLTQVVALASGTSHSLALR 315
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 84/229 (36%), Gaps = 63/229 (27%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG G + + + P P RL + +LA G + WG +
Sbjct: 420 VWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAWGD-NA 478
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ TSG G P P +P A + AAG H +++ G V+TWG
Sbjct: 479 YGQLGDTSG--GRRPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWG----------- 525
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
+S G+ A T + P RA
Sbjct: 526 ----------DNSYGQLGAGATPRGP----RA---------------------------- 543
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
P +V PG+ IT VAAG H+L L GQVW WG GQLG GS
Sbjct: 544 --PAVV---PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGS 587
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 101/266 (37%), Gaps = 57/266 (21%)
Query: 42 IPARLCG-GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
+P R+ G D+ CG F+L + WG A+ GQ L +G P +
Sbjct: 341 VPVRVSGVSDAQALACG--NAFSLVGRGDNVTLGWG-ANGSGQ--LGNGSSSVRALPGRV 395
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P+ + AAG H G V+ WG D+T Q
Sbjct: 396 PSLTAGASLAAGDHHVFLRQADGSVWAWG----------------------DNTYGQLGD 433
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSA-------REESENPASGDEFFTL----------SP 203
T + P+ R + R S++ R + A GD + SP
Sbjct: 434 GTLVSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSP 493
Query: 204 CLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V PGV T++AAG H+L L G VW WG GQLG G+ + P ++P L
Sbjct: 494 AQV---PGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGL 550
Query: 263 E---HAASGKDRPLLVRQGSVNSSGK 285
H A+G L +++SSG+
Sbjct: 551 AVITHVAAGLFHSL-----ALDSSGQ 571
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL-IPCLEHAASGKDRP 272
+T VAAG H++ L + G VW WG +GQLG G + VP + + A+G
Sbjct: 100 VTAVAAGNTHSMALREEGTVWTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHS 159
Query: 273 LLVRQGSV-----NSSGK---------------AGRSYVKEIACGGRHS 301
L + G+V N++G+ AG + V IA G HS
Sbjct: 160 LALINGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHS 208
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 103/258 (39%), Gaps = 30/258 (11%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG + G + S +P R+ G + G +++A G + TWG +
Sbjct: 572 VWAWGDNVYGQLGDGSTTSRNVPGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGE-NS 630
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ L G P P + A++V + +H V++ G ++ WG V+
Sbjct: 631 NGQ--LGDGTTTARPVPARVSLPATLVALSTRGSHTVALDTTGMLWAWG-------RNVS 681
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF- 199
G+ G+ +ST ++ PS R R T + R + A GD
Sbjct: 682 GQLGN-GTLVSESTPRR--------VPSFARVQGFASGLRTTFALRADGTVWAWGDNSLG 732
Query: 200 -------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSRIK 251
+ SP V + +A+G +H L +S G V+ +G GQLG GS +
Sbjct: 733 QLGNGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQ 792
Query: 252 MVPTPHLIP-CLEHAASG 268
P P C+E A+G
Sbjct: 793 TSPRWLTGPECIEAVAAG 810
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHL-IPCLEHAASGKDRPL 273
++AAG H+L ++ G VW WG +GQLG GS ++ PT + + + A+G +
Sbjct: 52 RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAVAAGNTHSM 111
Query: 274 LVR-QGSV-----NSSGK--------------AGRSYVKEIACGGRHSAVVTD 306
+R +G+V N+ G+ AG + V IA G HS + +
Sbjct: 112 ALREEGTVWTWGTNTDGQLGDGVSQRSVPAQVAGLTGVTAIAAGNLHSLALIN 164
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 99/259 (38%), Gaps = 58/259 (22%)
Query: 65 ATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A + GKL WG + GQ L +GK TP +A V A G H ++ TE
Sbjct: 139 AVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEE 197
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEV +WG G G K S S +E P K +KR
Sbjct: 198 GEVLSWG----------AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAA 247
Query: 183 S----------------SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ E SGDE L P +V P + +VA GG HT +
Sbjct: 248 GMLHSACIDEKGTLFIFGQKTEKGFGRSGDE---LRPTVVEEVPFSE--EVACGGYHTCV 302
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
++D G ++ WG G LGLG MV +P ++ +S P
Sbjct: 303 VTDSGDLYSWGSNENGCLGLGG-TDMVRSPEVLK-----SSLFKFP-------------- 342
Query: 287 GRSYVKEIACGGRHSAVVT 305
V +++CG +H+AV++
Sbjct: 343 ----VSKVSCGWKHTAVIS 357
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 109/285 (38%), Gaps = 93/285 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWA 114
CGG L +ESG++ G +D GQ + S + EP + + VV+ +AG
Sbjct: 80 CGGA--HTLFLTESGRVFAAG-LNDFGQLGIGSSVT-HSLEPIEVSGFDEKVVEVSAGNH 135
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +VT G+++ WG ++S+G+ KRAG+
Sbjct: 136 HSCAVTADGKLFAWG---------------------RNSSGQLGL---------GKRAGK 165
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
V RK CL ++ VA G H++ ++ G+V
Sbjct: 166 VVSTPRKVD--------------------CLAD----ARVKMVALGSEHSIATTEEGEVL 201
Query: 235 GWGYGGEGQLGLGSRIKMV--------PTPHLIPCLE------------HAASGKDRPLL 274
WG G G+LG G + ++ TP LI L+ H+A ++ L
Sbjct: 202 SWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTL 261
Query: 275 VRQGSVNSSGKAGRS-------------YVKEIACGGRHSAVVTD 306
G G GRS + +E+ACGG H+ VVTD
Sbjct: 262 FIFGQKTEKG-FGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTD 305
>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
Length = 533
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 27/194 (13%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEASVVKAAAGWAHCVSVTE 121
LA S++G++ +WG + GQ L S G P + +VV+ A G H V+VT+
Sbjct: 87 VLALSQNGEVFSWGH-NAFGQLGLGSTTVGIAPSLVGDTLSGHNVVQIACGSHHSVAVTD 145
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
GE++ WG C G + +D LP + R VV +
Sbjct: 146 RGEIFAWGRNSC-------GQVGIGSNVNQD-------LPRQVTGHLLNRFVRSVVCGQN 191
Query: 182 TSSAREE-----------SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
++ A + + +G+ SP LV V I ++A G H+L L+D
Sbjct: 192 STMALTDGGEVFAWGFNGNGQLGAGNLSNQHSPALVIGLHNVVIEQIACGFAHSLALTDE 251
Query: 231 GQVWGWGYGGEGQL 244
GQ++ WG GQL
Sbjct: 252 GQLFAWGSNTCGQL 265
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 46/108 (42%), Gaps = 25/108 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
TL P + G I +A G G H L LS G+V+ WG+ GQLGLGS + P L
Sbjct: 62 TLEPSRIDTLSGRAIVSLAYGSGPHVLALSQNGEVFSWGHNAFGQLGLGSTTVGIA-PSL 120
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ SG + V +IACG HS VTD
Sbjct: 121 VG---DTLSGHN--------------------VVQIACGSHHSVAVTD 145
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLV--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VP--- 254
++P LV TL+ G + ++A G H++ ++D G+++ WG GQ+G+GS + +P
Sbjct: 116 IAPSLVGDTLS-GHNVVQIACGSHHSVAVTDRGEIFAWGRNSCGQVGIGSNVNQDLPRQV 174
Query: 255 TPHLIP-CLEHAASGKDRPLLVRQG------SVNSSGKAG-----------------RSY 290
T HL+ + G++ + + G N +G+ G
Sbjct: 175 TGHLLNRFVRSVVCGQNSTMALTDGGEVFAWGFNGNGQLGAGNLSNQHSPALVIGLHNVV 234
Query: 291 VKEIACGGRHSAVVTD 306
+++IACG HS +TD
Sbjct: 235 IEQIACGFAHSLALTD 250
>gi|299117183|emb|CBN75147.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1991
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 94/252 (37%), Gaps = 53/252 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEP----FPLPTEASVVKAAAGW 113
CG +LA S++G+L +G +D + G P P E VV AA G
Sbjct: 1709 CGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVVAAAGGQ 1768
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H V +G+V+TWG STG E P +G
Sbjct: 1769 MHSSCVCASGKVFTWG---------------------HGSTGALGHGVAEDEPTPRMVSG 1807
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+ R E ++P + + T VA G HTL+L+ G+V
Sbjct: 1808 FGRDEARSAPQGAGEQDDP----------------DADILATSVACGAWHTLVLTKAGKV 1851
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKE 293
+G G GQLGL R + L P R + + + + G G YV E
Sbjct: 1852 HAFGDGFTGQLGLEDRGGEKESRALSP----------RVVRIERNAGGGGGSPGDVYVTE 1901
Query: 294 IACGGRHSAVVT 305
+ACG SAVV+
Sbjct: 1902 VACGSFSSAVVS 1913
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM--VPTPHLI--PCL 262
N GV+IT+V+ G H+L +SD G+++ +G G+LG + + V P ++ PCL
Sbjct: 1699 NLGVRITRVSCGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCL 1756
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 125/323 (38%), Gaps = 68/323 (21%)
Query: 22 VYMWGYLPGTSPEKSP-------------ILSPIPARLCGGDSWKDVCGGGCGF---ALA 65
+Y+ G + G SPE L +P R+ W+ V CGF AL
Sbjct: 1553 LYVDGQVTGLSPEDEAKKRTQDQESDADGALKLLPLRIP--TEWQ-VVQVACGFRHSALV 1609
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVKAAAGWAHCVSVTE 121
T+ SG ++T G + L G + EP + T+ +VV A G H +
Sbjct: 1610 TA-SGLVLTLGHGE---TGRLGHGDEEDALEPKVVRALADTKQAVVWAGCGREHTLVALA 1665
Query: 122 AGEVYTWGWR----------ECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQA----- 165
+G VY+WGW + V S + +F + G + S G++ +L A
Sbjct: 1666 SGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHSLAVSDAGRLYA 1725
Query: 166 -PPSD--KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
PSD + + VV S+ R +PCL ++ A G
Sbjct: 1726 FGPSDGGRLGFKAVVGTGGVSAPR------------IVRAPCLAE----ERVVAAAGGQM 1769
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ + G+V+ WG+G G LG G + PTP ++ + G+D QG+
Sbjct: 1770 HSSCVCASGKVFTWGHGSTGALGHGV-AEDEPTPRMV-----SGFGRDEARSAPQGAGEQ 1823
Query: 283 SGKAGRSYVKEIACGGRHSAVVT 305
+ACG H+ V+T
Sbjct: 1824 DDPDADILATSVACGAWHTLVLT 1846
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 100/253 (39%), Gaps = 38/253 (15%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P ++ L+ I A L GDS +LA +G + TWGS + GQ L G
Sbjct: 503 PVQATGLASISA-LAAGDS----------HSLALRGNGSVWTWGS-NAYGQ--LGDGTAI 548
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+ +P + AAG H +++ G V+ WG + DFG G D
Sbjct: 549 DRATAAQVPGLTDITALAAGNHHSLALRNDGTVWVWG----------SNDFGQLG----D 594
Query: 153 STGKQSALPTEQAPPSDKRAGEE------VVKRRKTSSAREESENPASGDEFFTLSPCLV 206
T P + + S RA E V T ++ GD T V
Sbjct: 595 GTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPV 654
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA- 265
++ +T VA G H+L L + G +W WGY GQLG G+ + TP +P L
Sbjct: 655 QVSGLTGVTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTS-GIQSTPAQVPGLTGVI 713
Query: 266 --ASGKDRPLLVR 276
A+G L +R
Sbjct: 714 ALAAGNGHSLALR 726
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 92/253 (36%), Gaps = 45/253 (17%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P PA GD LA G + WG G L +G + P +
Sbjct: 144 PAPAVSAAGD-----------HTLALRRDGTVWAWGF---NGSGQLGNGTATDRATPVQV 189
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P SV+ AA AH +++ G V+ WG +G G D T Q
Sbjct: 190 PGLTSVMAVAASEAHSLALRSDGTVWAWG----------DNGYGQLG----DGTKAQRTT 235
Query: 161 PTEQAPPSDKRA------GEEVVKRRKTSSAREES------ENPAS--GDEFFTLSPCLV 206
P + + A G V + + R + +N A GD T V
Sbjct: 236 PVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPV 295
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLE 263
+ +T +AAG H+L L D G VW WG GQLG G+ R V P L +
Sbjct: 296 QVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIA 355
Query: 264 HAASGKDRPLLVR 276
AA G D L +R
Sbjct: 356 VAAGGGDDSLGMR 368
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 79/204 (38%), Gaps = 24/204 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G L WG ++ GQ L +G G P +P V+ AAG H ++
Sbjct: 668 GVYHSLALRNDGTLWAWGY-NNVGQ--LGNGTSGIQSTPAQVPGLTGVIALAAGNGHSLA 724
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE--- 175
+ G V+ WG FG G D T + PT+ ++ A
Sbjct: 725 LRTDGTVWGWG----------ANSFGQLG----DGTTTPRSTPTQVPGLTNVIALNAGAF 770
Query: 176 -VVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
V R S E A GD T V ++ +T +AAG H L L
Sbjct: 771 YTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTDVTALAAGNAHALALRTDRT 830
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTP 256
VW WG GQ+G G+ ++P P
Sbjct: 831 VWAWGGNQRGQIGDGTA-SIMPAP 853
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 85/217 (39%), Gaps = 34/217 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G + WGS +D GQ L G P + +++ AG AH V+
Sbjct: 568 GNHHSLALRNDGTVWVWGS-NDFGQ--LGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVA 624
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V G V+ WG DFG G D T A+P + + + A V
Sbjct: 625 VHLNGTVWVWG----------NNDFGQLG----DGTVTSRAMPVQVSGLTGVTA--VAVG 668
Query: 179 RRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLIL 227
+ + R + +G +P V PG+ + +AAG H+L L
Sbjct: 669 VYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQV---PGLTGVIALAAGNGHSLAL 725
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G VWGWG GQLG G+ TP +P L +
Sbjct: 726 RTDGTVWGWGANSFGQLGDGTTTPR-STPTQVPGLTN 761
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPL 273
V+A G HTL L G VW WG+ G GQLG G+ R V P L + AAS
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMAVAASEAHSLA 207
Query: 274 LVRQGSVNSSGKAG 287
L G+V + G G
Sbjct: 208 LRSDGTVWAWGDNG 221
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 25/235 (10%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA---- 114
G +LA + G + WG+ + GQ L G P P +P SV+ AAG
Sbjct: 309 GAFHSLALRDDGTVWAWGN-NSSGQ--LGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSL 365
Query: 115 -----HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS- 168
H +++ G V+ WG+ ++R FG + + + S L A +
Sbjct: 366 GMRGDHSLALKSDGTVWAWGY-------NLSRQFGDGMPATRTTPVQVSELTGGTALVAG 418
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
D A V+K T A ++ + G+ + + ++ IT +A G H++ +
Sbjct: 419 DLHA--VVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVG 476
Query: 229 DMGQVWGWGYGGEGQLGLG-SRIKMVPTPHL-IPCLEHAASGKDRPLLVR-QGSV 280
G +W WG GQLG+G + + +P + + A+G L +R GSV
Sbjct: 477 SDGGIWAWGDNRRGQLGIGITATREIPVQATGLASISALAAGDSHSLALRGNGSV 531
>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
Length = 400
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 83/213 (38%), Gaps = 35/213 (16%)
Query: 65 ATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A + GKL WG + GQ L +GK TP +A V A G H ++ TE
Sbjct: 114 AVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEE 172
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEV +WG G G K S S +E P K +KR
Sbjct: 173 GEVLSWG----------AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAA 222
Query: 183 S----------------SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ E SGDE L P +V P + +VA GG HT +
Sbjct: 223 GMLHSACIDEKGTLFIFGQKTEKGFGRSGDE---LRPTVVEEVPFSE--EVACGGYHTCV 277
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++D G ++ WG G LGLG MV +P ++
Sbjct: 278 VTDSGDLYSWGSNENGCLGLGG-TDMVRSPEVL 309
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 105/274 (38%), Gaps = 91/274 (33%)
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEV 125
+ESG++ G +D GQ + S + EP + + VV+ +AG H +VT G++
Sbjct: 64 TESGRVFAAG-LNDFGQLGIGSSVT-HSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKL 121
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
+ WG ++S+G+ KRAG+ V RK
Sbjct: 122 FAWG---------------------RNSSGQLGL---------GKRAGKVVSTPRKVD-- 149
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
CL ++ VA G H++ ++ G+V WG G G+LG
Sbjct: 150 ------------------CLAD----ARVKMVALGSEHSIATTEEGEVLSWGAAGAGRLG 187
Query: 246 LGSRIKMV--------PTPHLIPCLE------------HAASGKDRPLLVRQGSVNSSGK 285
G + ++ TP LI L+ H+A ++ L G G
Sbjct: 188 HGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKG- 246
Query: 286 AGRS-------------YVKEIACGGRHSAVVTD 306
GRS + +E+ACGG H+ VVTD
Sbjct: 247 FGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTD 280
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 27/115 (23%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
S D T +P G+ + K+A +GG+H L ++ G+++ WG G +G+LGLG+ +
Sbjct: 3903 SSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVN 3962
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
M PHLI L+ +V + CG HSA +TD
Sbjct: 3963 M-NVPHLIESLK------------------------SKHVIDAGCGSSHSACITD 3992
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 78/188 (41%), Gaps = 30/188 (15%)
Query: 85 YLTSGKHGE-TPEPFPLPTEASVVKAAAGWA--HCVSVTEAGEVYTWGWRECVPSAKVTR 141
Y+ G+ T E P + +++ + H +++T+ G+VY+WG
Sbjct: 486 YVMDASMGDFTVEQLFFPGDEEIIQIDHNPSGNHILALTKDGKVYSWGQ----------- 534
Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------N 191
GS G +T Q+A PT A S R +++ E+
Sbjct: 535 --GSNGVLGIGNTESQTA-PTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGR 591
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKV--AAGGRHTLILSDMGQVWGWGYGGEGQLGL-GS 248
G+ L P +V GVKI +V +G HTL L D GQVW WG G G+LG GS
Sbjct: 592 LGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGS 651
Query: 249 RIKMVPTP 256
VP P
Sbjct: 652 DQNKVPKP 659
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWA 114
G F++ ++ GK+ TWG + Y G + +P P + ++ + A G
Sbjct: 3177 GMHFSVLLTKEGKVYTWGKGE-----YYRLGNDSTSVQPIPTLVDGLASKTITQVAVGAL 3231
Query: 115 HCVSVTEAGEVYTWGWRE 132
HC+++T +GEVY+WG E
Sbjct: 3232 HCLALTSSGEVYSWGDNE 3249
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 40 SPIPAR---LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK----HG 92
S +P + L G K +CG F++A + +G + TWG D Y G H
Sbjct: 4069 SKVPKKIDSLTGKHVIKLLCGSQ--FSMALTTAGHVYTWGKGD-----YYRLGHGDDSHQ 4121
Query: 93 ETPE-PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
TP L +V+ G HC+ TE+G+V++WG
Sbjct: 4122 RTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWG 4159
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
PG+ K P PI K +CG AL ++ GKL +WG D + +
Sbjct: 649 PGSDQNKVP--KPISGIGSTSPVVKIICGNQISMAL--TKDGKLYSWGCGDTYQLGH-GN 703
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+H P+ +E V + G HCV++T +VY WG
Sbjct: 704 QEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
V+ V+ GRH L ++ G+V+ WG G GQLG GS DR
Sbjct: 3012 VRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGS-----------------LQSYDR 3054
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P ++ +++E++CG HSA V+
Sbjct: 3055 PKMIEIFQAK--------HIREVSCGTGHSAAVS 3080
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 110/303 (36%), Gaps = 72/303 (23%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGG-CGFALATSESGKLITWG 76
V++WG GT ++ + SPI +R GG C F + S+ GK+ G
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVV--SDDGKVFACG 2983
Query: 77 SADDEGQS-YLTSGKHGETPEPFPLPTEASVV--KAAAGWA--HCVSVTEAGEVYTWGWR 131
EG S L G P + + + V K A A H ++VT G+V++WG
Sbjct: 2984 ----EGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWG-- 3037
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
+G G S + + QA R+ S S
Sbjct: 3038 --------DGQYGQLGHGSLQSYDRPKMIEIFQAK-----------HIREVSCGTGHSAA 3078
Query: 192 PASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQ 232
+ E FT P LV V+I+ VA G R HTL D
Sbjct: 3079 VSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGD-NS 3137
Query: 233 VWGWGYGGEGQLGL--GSRIKMVPTPHL--------IPCLEHAASGKDRPLLVRQGSVNS 282
+W WG G G+LGL GS VP + I C H + LL ++G V +
Sbjct: 3138 LWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSV-----LLTKEGKVYT 3192
Query: 283 SGK 285
GK
Sbjct: 3193 WGK 3195
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 18/204 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG G L P+ +V A GW H +SV+ G
Sbjct: 179 AVTEDGELFGWGWGR-YGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG 237
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + L + + +G T+
Sbjct: 238 LYTYGWSK----------YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD 287
Query: 185 AR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ + +GD SP + K+ +++ G RHTL ++D V+ WG
Sbjct: 288 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGR 347
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCL 262
G GQLG G + TP ++ L
Sbjct: 348 GTNGQLGHGESVDR-NTPMILEAL 370
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 93/256 (36%), Gaps = 43/256 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A + +WG +D GQ + +P +V G H +
Sbjct: 16 GASHSVALLSGNIVCSWGRGED-GQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTA 74
Query: 119 VTEA-GEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQAPPSDKR 171
+ A EVY+WGW DFG G L Q D
Sbjct: 75 YSVARTEVYSWGWG----------DFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSH 124
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
++ S R ++ G +L P + G+ I VAAG HT +++ G
Sbjct: 125 CLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDG 184
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+++GWG+G G LGLG R L+P + G D+ ++V
Sbjct: 185 ELFGWGWGRYGNLGLGDR-----NDRLVPQKVSSVDG-DKMVMV---------------- 222
Query: 292 KEIACGGRHSAVVTDM 307
ACG RH+ V+ +
Sbjct: 223 ---ACGWRHTISVSSL 235
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 96/252 (38%), Gaps = 55/252 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
TP+P + + A G +HC++VT GEV +WG + G G +D
Sbjct: 103 TPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQN----------GQLGLGTTED 152
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q E AG E T++ E+ E N GD L
Sbjct: 153 SLVPQKIQAFEGISIKMVAAGAE-----HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV 207
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V+ G K+ VA G RHT+ +S +G ++ +G+ GQLG G + PH + L
Sbjct: 208 PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD-FEDRLVPHRLEAL 266
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAG-----------------RSYVKEI 294
+ + + L G + N G+ G V +I
Sbjct: 267 RGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQI 326
Query: 295 ACGGRHSAVVTD 306
+CG RH+ VTD
Sbjct: 327 SCGWRHTLAVTD 338
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 42 IPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P RL GD+ + GG +A + GKL WG + GQ +P
Sbjct: 259 VPHRLEALRGDNISQISGG-WRHTMALTTDGKLYGWG-WNKFGQVGAGDNIDHCSPIQIK 316
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + V++ + GW H ++VT+ V++WG
Sbjct: 317 FPQDQKVIQISCGWRHTLAVTDKQNVFSWG 346
>gi|47214873|emb|CAG00921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 79/212 (37%), Gaps = 66/212 (31%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP-----LPTEASVVKAAAGW 113
GC +LA SG + +WG+A+D GQ L P P +P VV+ A G
Sbjct: 85 GCNHSLAVDASGHVFSWGAAED-GQLGLNPNPLSGRPRRVPTGMVTIPLRVPVVQVACGK 143
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
+H V++T G+V +WG + +G G G
Sbjct: 144 SHSVALTTGGDVLSWG----------SNSYGQLG------------------------LG 169
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
EV + +P LV GV +++++AG HT+ L+ G V
Sbjct: 170 TEVPSQE---------------------TPALVAGLVGVPVSQISAGATHTMFLTLAGLV 208
Query: 234 WGWGYGGEGQLGLGS-----RIKMVPTPHLIP 260
+ G GQLGL R + P L P
Sbjct: 209 YCCGANQSGQLGLNRVDEKGRFDVCMVPRLRP 240
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 30/131 (22%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------ 258
+VT+ V + +VA G H++ L+ G V WG GQLGLG+ + TP L
Sbjct: 127 MVTIPLRVPVVQVACGKSHSVALTTGGDVLSWGSNSYGQLGLGTEVPSQETPALVAGLVG 186
Query: 259 IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------------I 294
+P + +A L G V N SG+ G + V E I
Sbjct: 187 VPVSQISAGATHTMFLTLAGLVYCCGANQSGQLGLNRVDEKGRFDVCMVPRLRPLGVCFI 246
Query: 295 ACGGRHSAVVT 305
+CG H+A +T
Sbjct: 247 SCGEAHTAALT 257
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 101/251 (40%), Gaps = 34/251 (13%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVKAAAGWAH 115
CGF +A +E+G L +WG D+ GQ SG G P + + AAG H
Sbjct: 94 CGFKHTVAVTETGALASWG-GDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYH 152
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++T +G+VY++G D S S K G L Q + +
Sbjct: 153 TLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWG----LGVTQIACGENHSAAL 208
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
V + + R + G P V + ++A GG HTL ++ G+++
Sbjct: 209 TVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFS 268
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
WG+G GQ G G++ + V +P + LE GR V +++
Sbjct: 269 WGHGLWGQTGHGTK-EDVLSPKQVHQLE-----------------------GRVLV-QVS 303
Query: 296 CGGRHSAVVTD 306
G RH+ V+ D
Sbjct: 304 AGARHTVVLLD 314
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 92/241 (38%), Gaps = 57/241 (23%)
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
D GQ L G + + P P L T +V AA H +T+ GEVYT G
Sbjct: 11 DLGQ--LGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG-------- 60
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--G 195
+ D G G G + + + D + K + A E+ AS G
Sbjct: 61 --SNDAGQLG-----VRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGG 113
Query: 196 DEFFTL-----------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
DE+ L P +V + + ++VAAGG HTL L+ G V+ +G G G L
Sbjct: 114 DEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGAL 173
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G G+ + TP L+ L V +IACG HSA +
Sbjct: 174 GHGN-LDGCSTPSLVKSLWGLG------------------------VTQIACGENHSAAL 208
Query: 305 T 305
T
Sbjct: 209 T 209
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 88/253 (34%), Gaps = 70/253 (27%)
Query: 80 DEGQSYLTS-------GKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTW 128
DEG+ Y T G G + P+ A V A G+ H V+VTE G + +W
Sbjct: 52 DEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASW 111
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G E +G G S + P + ++ R +
Sbjct: 112 GGDE----------YGQLGF--------DSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHT 153
Query: 189 SENPASGDEFF----------------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
SGD + +P LV G+ +T++A G H+ L+ G+
Sbjct: 154 LALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGK 213
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
V+ WG G GQLG GS + + ++H V
Sbjct: 214 VFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHD-------------------------VI 248
Query: 293 EIACGGRHSAVVT 305
+IACGG H+ +T
Sbjct: 249 QIACGGDHTLAIT 261
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 62/167 (37%), Gaps = 24/167 (14%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V + A G H ++T G+V+TWG G G ST + LP
Sbjct: 195 VTQIACGENHSAALTVDGKVFTWGR-------------GKYGQLGHGST-QNIKLPVAVK 240
Query: 166 PPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKIT 215
D + T + + G + LSP V G +
Sbjct: 241 ALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLV 300
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+V+AG RHT++L D G+V+GWG + QLG R H+ L
Sbjct: 301 QVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDFSTYGHICVSL 347
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAG 112
G G LA + G++ +WG D Y G + + +P + + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P +V G+ KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LV + G+ I +A G HTL LS G+V+ WG EGQLGLG V P L+ L
Sbjct: 4263 PQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLG-HTNHVREPTLVTAL 4321
Query: 263 E 263
+
Sbjct: 4322 Q 4322
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 84/221 (38%), Gaps = 57/221 (25%)
Query: 55 VCGGGCGFALATS---------ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
+CG C F + + G+L G++DD + S G
Sbjct: 4014 ICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQGFVV--------TQ 4064
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V + H +++TE+GEV++WG D+G G D + + Q
Sbjct: 4065 LVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSDRQRRPRQIEALQ- 4113
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-----------------PCLVTL 208
GEEVV + S + S + + FT P VT
Sbjct: 4114 -------GEEVV---QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4163
Query: 209 NPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
G+ I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4164 LEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGN 4204
>gi|212218636|ref|YP_002305423.1| hypothetical membrane spanning protein [Coxiella burnetii
CbuK_Q154]
gi|212012898|gb|ACJ20278.1| hypothetical membrane spanning protein [Coxiella burnetii
CbuK_Q154]
Length = 479
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 43/233 (18%)
Query: 62 FALATSESGKLITWGSA--------DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
+ +A + G + WG D++ + + PE P + +++ G
Sbjct: 230 YLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHP---DDYIIQVVVGD 286
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++T+ G +Y WG +G G + + + LP + P +R
Sbjct: 287 RHTLALTQLGYIYAWG----------KNSYGQLGFRDQQDRNRPALLPWNRFPGLLERND 336
Query: 174 E--EVVKRRKTSSAREESENP---------ASGDEFFTLSPCLVTLN--PGVK-----IT 215
E++ S AR E GD F P L+T N PG++ +
Sbjct: 337 RIIELIAGGARSLARTEQGFIYIWGARWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHLV 396
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPT---PHLIPCLEH 264
++ AG HTL ++ G ++ WG GQLGLG RI+ P P+ IP L
Sbjct: 397 ELIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDRRIQRQPALLDPNAIPPLNQ 449
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 40/142 (28%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-----VPTPHLIPCLEH- 264
V I ++ + RH IL++ G ++GWG+ G+LGLG R + +P LE
Sbjct: 159 NVTIVQLLSDYRHAFILTEEGGIYGWGFNISGELGLGYRFERSQPTELPQNFFPYLLERG 218
Query: 265 ----AASGKDRPLLVR--QGSV-----NSSGKAG-----------------------RSY 290
+ DR L+ R QG V N G+ G Y
Sbjct: 219 DRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDY 278
Query: 291 VKEIACGGRHSAVVTDMSYPIA 312
+ ++ G RH+ +T + Y A
Sbjct: 279 IIQVVVGDRHTLALTQLGYIYA 300
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P L+
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLV 659
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4019 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4077
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4078 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4119
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4120 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4169 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN 4222
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4133 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4190
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4191 ACGLNHTLAVSTDGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4233
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4234 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4290
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4291 VIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4340
>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 985
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 25/95 (26%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ + +++AGG H+ +LS G V+GWG GQLGLG T +P + + SGK
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD-----TTDRFVPTIVKSLSGKK 224
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
I+CGG H+A ++
Sbjct: 225 --------------------TVSISCGGEHTATLS 239
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 44/224 (19%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAH 115
CG ++A S G+L WG + GQ L + ++P+ V + +AG H
Sbjct: 124 ACGDQHSVALSNDGQLFVWGE-NAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNH 182
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++ +G V+ WG SAG T + +PT S K
Sbjct: 183 SFVLSLSGVVFGWG-------------SNSAGQLGLGDTTDR-FVPTIVKSLSGK----- 223
Query: 176 VVKRRKTSSAREESENPASGDEFFTLS-----------------PCLVTLNPGVKITKVA 218
K S E + + G FT P LV G K+++V
Sbjct: 224 --KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVT 281
Query: 219 AGGRHTLILSDM-GQVWGWGYGGEGQLGLGSRIKM-VPTPHLIP 260
G HTL+L + +++ +G G +GQLG G ++K VP P L+P
Sbjct: 282 CGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLP 325
>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
Length = 233
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEG 82
+G L ++ +L P + +DV GCG + + G + T G +D G
Sbjct: 9 YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLG 64
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q L K + PE ++V A G AH +++ + G+VY WG
Sbjct: 65 Q--LGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG------------- 109
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF--- 199
S G + + +P SD + + + + + SE G +
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 200 --------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 170 GLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSVNSSGK 285
A G +L G++ G+
Sbjct: 197 AGGAHSFVLTLSGAIFGWGR 216
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
I VA G HTL L+D GQV+ WG +GQLGL + + P I L
Sbjct: 85 NIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 30/123 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
KI +++ G H+L LS+ G+V+ WG GQLGLGS+I TP L IP ++ A
Sbjct: 138 KIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTA 197
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRSY-------------------VKEIACGGRHSA 302
G L G+V N++G+ G V I+CG H+A
Sbjct: 198 GGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTA 257
Query: 303 VVT 305
V++
Sbjct: 258 VLS 260
Score = 40.4 bits (93), Expect = 0.93, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
I ++ G H++ +SD G ++ WG G EGQLG G+ TP I L
Sbjct: 86 IVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGL 134
>gi|348680650|gb|EGZ20466.1| hypothetical protein PHYSODRAFT_493908 [Phytophthora sojae]
Length = 1453
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 81/219 (36%), Gaps = 38/219 (17%)
Query: 43 PARLCGG----DSWKDVCGGGCGFALATSESGK-LITWG------SADDE---GQSYLTS 88
P RL G ++ FAL + G+ + WG AD + S +
Sbjct: 430 PVRLIGAFVTLNAKLTTLAASSTFALGVQDDGRSIFAWGRCLPRLHADQDSSNNASQMVC 489
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
H TP + A VV+ A G H +++TE G V++WG+ D G G
Sbjct: 490 LTHA-TPRRLQVRLPARVVEVACGLRHALALTEDGMVFSWGFN----------DHGQLGH 538
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
++ +++ D+R GE+ + AS C
Sbjct: 539 GSAETLAARTSGRVRYTSYYDERTGED-------------EDYLASPTRLLYFEGCAAQQ 585
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+ + V +G + + LS G V+ WG EGQLG G
Sbjct: 586 AEPIPVAHVCSGDYYCMALSRAGDVFTWGEASEGQLGHG 624
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 185 AREESENPASGDEFFT-LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
A ++S N AS T +P + + ++ +VA G RH L L++ G V+ WG+ GQ
Sbjct: 476 ADQDSSNNASQMVCLTHATPRRLQVRLPARVVEVACGLRHALALTEDGMVFSWGFNDHGQ 535
Query: 244 LGLGS 248
LG GS
Sbjct: 536 LGHGS 540
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
F P + GV++ +A G H+L ++ G+V+ WG G GQLG
Sbjct: 1326 FVAHPTRIPALAGVELKLLACGSAHSLAVTQRGKVFSWGRGARGQLG 1372
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 460 GSDGHTLAFTSEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 514
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +V+E GE+YTWG DFG G DS + +PT S+
Sbjct: 515 YRHSAAVSEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 558
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P +V G+ I KV AG
Sbjct: 559 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGS 618
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 619 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 654
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
GV I VA G HTL LS G V+ WG EGQLGLG V P LI L+
Sbjct: 4275 GVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLISALQ 4326
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 84/221 (38%), Gaps = 57/221 (25%)
Query: 55 VCGGGCGFALATS---------ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
VCG C F + + G+L G++DD + S G
Sbjct: 4018 VCGQNCTFVIQANGTVSACGEGSYGRL-GQGNSDDLHVLTVISALQGFVV--------TQ 4068
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+V + H +++TE+GEV++WG D+G G D + + Q
Sbjct: 4069 MVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSDRQRRPRQIEALQ- 4117
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-----------------PCLVTL 208
GEEVV + S + S S + F+ P V+
Sbjct: 4118 -------GEEVV---QMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSA 4167
Query: 209 NPGVKITKVAAGGRHTLILSDMGQ-VWGWGYGGEGQLGLGS 248
G ++ +VA G HTL +S G VW +G G G+LGLG+
Sbjct: 4168 LEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGN 4208
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 80/217 (36%), Gaps = 26/217 (11%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE L +V A GW H ++V+ +G
Sbjct: 192 AVTEDGDLYGWGWGR-YGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGI 250
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + P + D + R T +
Sbjct: 251 LYTYGWSK----------YGQLGH----GDFEDHLFPHKVEALKDSSTSQISGGWRHTMA 296
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + +GD SP V K+ +VA G RHTL ++ V+
Sbjct: 297 LTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVF 356
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
WG G GQLG G + P +I + SG +
Sbjct: 357 AWGRGTSGQLGHGEIVDR-NKPLMIDAISPDGSGSKK 392
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 82/209 (39%), Gaps = 29/209 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-----FPLPTEASVVKAAAGW 113
G ++A E L +WG +D GQ L G + P F P SV+ A
Sbjct: 29 GASHSVALLEGNVLCSWGRGED-GQ--LGHGDAEDRLVPTVISGFDAPRITSVICGAD-- 83
Query: 114 AHCVSVTEA-GEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQAP 166
H + +E +VY+WGW DFG G F + +Q
Sbjct: 84 -HTTAYSEEEQQVYSWGWG----------DFGRLGHGNSSDVFTPQPVRALQGIKIKQMA 132
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
D + S R ++ G +L P + G+ + +AAG HT
Sbjct: 133 CGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAA 192
Query: 227 LSDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
+++ G ++GWG+G G LGLG R + VP
Sbjct: 193 VTEDGDLYGWGWGRYGNLGLGDRNDRFVP 221
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ +P P E V + A GW H +
Sbjct: 289 GGWRHTMALTSDGKLYGWG-WNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTL 347
Query: 118 SVTEAGEVYTWG 129
+ TE V+ WG
Sbjct: 348 AYTEKKNVFAWG 359
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 88/220 (40%), Gaps = 54/220 (24%)
Query: 53 KDV--CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEA--S 105
+DV GG ++A + +G++ +G EG++ + E P T A
Sbjct: 208 RDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPR 267
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V A G HC +VT +G + +WG E FG G Q
Sbjct: 268 VATVACGQRHCAAVTTSGVLLSWGNEE----------FGQLG----------------QG 301
Query: 166 PPSD---KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
PP D K + +++RR +S + P LV + VK T VA G
Sbjct: 302 PPRDSSSKGDAKSLIRRRADAS----------------MMPRLVG-SGHVKFTSVACGAG 344
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
HTL L+ G+V+ +G G G LG G R+ P L+ L
Sbjct: 345 HTLALTANGRVFSFGRGAFGALGHGDRLN-CDVPRLVDAL 383
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 47 CGGDSWKDVCGGGCGFALA--TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
CGGD + GGG G LA SG T +AD + + G+
Sbjct: 447 CGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDE---------- 496
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
V + +AG H V+VTE G VYTWG R ++ + G AG+
Sbjct: 497 KVFQISAGSKHSVAVTEGGCVYTWGART---QGQLGHELGDAGT 537
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 71/196 (36%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE--PFPLP------TEASVVKAA 110
G +LA + G+L +WGS +G+ G + +P P +VV+ +
Sbjct: 97 GLSHSLALTNWGQLFSWGSN--------ATGQLGHDLDMVSYPAPRMIKSIATKTVVQIS 148
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G +HC+++T +GE++ WG E +G G +TGK+ +PT
Sbjct: 149 CGHSHCLALTNSGELFAWGANE----------YGQLG---LGTTGKK--VPTAT------ 187
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
LV G+ I +A GG H+ +S
Sbjct: 188 ----------------------------------LVKSLAGIPIAFIACGGNHSFAVSKS 213
Query: 231 GQVWGWGYGGEGQLGL 246
G ++GWG GQLGL
Sbjct: 214 GAIFGWGKNTFGQLGL 229
Score = 45.4 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 24/92 (26%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ +++ G H L L++ G+++ WG GQLGLG+ K VPT L+ L
Sbjct: 144 VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSL----------- 192
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
AG + IACGG HS V+
Sbjct: 193 ------------AGIP-IAFIACGGNHSFAVS 211
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+T+V+ G H+L L++ GQ++ WG GQLG + P P +I
Sbjct: 91 VTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMI 136
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 103/262 (39%), Gaps = 40/262 (15%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPAR----LCGGDSWKDVCGGGCGFALAT 66
NE + K+ V+ +G ++S + R LC + G G +A
Sbjct: 36 NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSG-PHVVAA 94
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSVTEAG 123
+E+G++ +WG G L +G + P + + + A G H + +T+ G
Sbjct: 95 TENGEIYSWGH---NGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRG 151
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---DKRAGEEVVKRR 180
EV+ WG+ C G GS G + + T + S KR +
Sbjct: 152 EVFAWGYNNC----------GQVGS------GATANISTPRKVVSVLGGKRVVSIACGQT 195
Query: 181 KTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + + E G+ SPC V+ G+ I++ A G H++ LSD
Sbjct: 196 SSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDE 255
Query: 231 GQVWGWGYGGEGQLGLGSRIKM 252
G ++ WG GQLG G++ +
Sbjct: 256 GNIYTWGANSYGQLGTGNKANL 277
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 25/153 (16%)
Query: 115 HCVSVTEAGEVYTWGWR-----------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
H V+ TE GE+Y+WG + + ++T + GS Q S + T+
Sbjct: 90 HVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTD 149
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ EV + + S A+ + +V++ G ++ +A G
Sbjct: 150 RG---------EVFAWGYNNCGQVGSGATAN----ISTPRKVVSVLGGKRVVSIACGQTS 196
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+L + D G+V+GWGY G GQLGLG+ + P+P
Sbjct: 197 SLAVVDSGEVYGWGYNGNGQLGLGNNVNQ-PSP 228
>gi|260826876|ref|XP_002608391.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
gi|229293742|gb|EEN64401.1| hypothetical protein BRAFLDRAFT_95399 [Branchiostoma floridae]
Length = 448
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 76/206 (36%), Gaps = 58/206 (28%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAAG 112
D G F LA +E G+L +WGS + GQ + K H P P +V AAG
Sbjct: 107 DTVACGWDFTLAVTEDGQLFSWGS-NAFGQLGVPEVKGHTSVPTPVQTLQGVRIVGVAAG 165
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H V++ + G V+TWG AG G+ L + P K+
Sbjct: 166 LRHAVALDDTGSVWTWG----------------AG-----KRGQLGRLEEGRCPTVSKQT 204
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
G+ V L+ I V AG H+L L++ +
Sbjct: 205 GK-------------------------------VQLDVESSIVAVKAGSYHSLALTEDKR 233
Query: 233 VWGWGYGGEGQLG-LGSRIKMVPTPH 257
VW WG GQLG G R M PH
Sbjct: 234 VWTWGRADYGQLGRFGDRTVM---PH 256
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 59 GCGFALATSESGKLITWGSAD-------DEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
G A+A ++G + TWG+ +EG+ S + G+ L E+S+V A
Sbjct: 165 GLRHAVALDDTGSVWTWGAGKRGQLGRLEEGRCPTVSKQTGKVQ----LDVESSIVAVKA 220
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
G H +++TE V+TWG D+G G F G ++ +P + P++
Sbjct: 221 GSYHSLALTEDKRVWTWG----------RADYGQLGRF-----GDRTVMPHSCSQPAE 263
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGW-RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+V AA H +V+ G VYTWG + A V + S+ +F K + G AL
Sbjct: 212 IVGTAANGDHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKVALGWNHALAM-- 269
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV---KITKVAAGG 221
GE + + +N F L + PG+ KIT +AAG
Sbjct: 270 -----SGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGA 324
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP-TPHLIPCLEHAAS 267
H++I+++ G++ WG+G GQLGLG +R + P T L L AAS
Sbjct: 325 EHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAAS 372
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMV 253
GD SP V+ + + +VA G RH+L+L QV+G+G G GQLG+ + R+K V
Sbjct: 139 GDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSV 198
Query: 254 PTPHLIPCLE------HAASGKDRPLLVRQGSVNSSGKAGRSY 290
P ++ E AA+G + G V + G+ + +
Sbjct: 199 NVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGF 241
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 52/137 (37%), Gaps = 31/137 (22%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
DE F P L+ I+ +A GG H + L+ G+ WG G GQLG G +
Sbjct: 38 DEHF---PQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLY 94
Query: 256 PHLIPCLE-----HAASGKDRPLLVR---------QGSVNSSGKAGRS------------ 289
P + L+ H ++G V GS G +
Sbjct: 95 PKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFV 154
Query: 290 --YVKEIACGGRHSAVV 304
+V ++ACG RHS V+
Sbjct: 155 DLHVAQVACGMRHSLVL 171
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 91/237 (38%), Gaps = 42/237 (17%)
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
A + +AA+G H + + G V+ G C G G + G AL T
Sbjct: 21 AELRQAASGERHSLLLLSDGTVHACGDNSC-------GQLGRRGVPHRKRPGLIQALETL 73
Query: 164 QAP--PSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTLSPCLVTLNPGVKITKVAA 219
K V + + + SE EF +P V G+KI +V+
Sbjct: 74 NVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSC 133
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH------AASGKDRPL 273
G H+L LS GQV+ WG GQLGLG +P + LE AA G
Sbjct: 134 GHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFA 193
Query: 274 LVRQGS-----VNSSGKAG--------RSY-------VKE-----IACGGRHSAVVT 305
L G+ N++G+ +SY +KE I+CG H+AV+T
Sbjct: 194 LSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLT 250
>gi|260831025|ref|XP_002610460.1| hypothetical protein BRAFLDRAFT_85599 [Branchiostoma floridae]
gi|229295826|gb|EEN66470.1| hypothetical protein BRAFLDRAFT_85599 [Branchiostoma floridae]
Length = 652
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 57 GGGCGFALATSESGKLITWGS-ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G G +A + G++ WG+ D+ GQ LTS + P P +P A V+K ++G +H
Sbjct: 351 GAGDSHTIALTTDGRVWCWGTFRDNNGQFGLTSDGKVQ-PRPVEIPLSARVLKISSGESH 409
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP--------- 166
+TE G++YT+G E ++ F G K +L + AP
Sbjct: 410 VACLTEDGDLYTFGCGEQGELGRIAECFTVRGGR------KGRSLLLDPAPVRMKGKMGS 463
Query: 167 -PSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFTLS---------PCLVTLNPGVKI 214
S + + T + ++ E+ + + ++ + P V G +
Sbjct: 464 RKSHMKFADVFCGSHNTFAISDDKEDVYAFGMNNYYQMGLDGDAARYVPEKVESLSGKRW 523
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
T++ G HT+ LS G+V+ G G G+LGLG
Sbjct: 524 TQIVGGQHHTVALSADGEVYVMGRGQYGRLGLG 556
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
P LV + K+ V AGG HT++L+ G+VW WG EG LG
Sbjct: 286 PGLVAIQD--KVIDVCAGGMHTVVLTVKGEVWSWGCNDEGALG 326
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 60/170 (35%), Gaps = 58/170 (34%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E +P + + V+ AG H V +T GEV++WG C + RD
Sbjct: 282 ERKKPGLVAIQDKVIDVCAGGMHTVVLTVKGEVWSWG---CNDEGALGRD---------- 328
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
S + TE P V L+
Sbjct: 329 ----TSEIGTETVPGK-------------------------------------VELSS-- 345
Query: 213 KITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIP 260
KI ++ AG HT+ L+ G+VW WG GQ GL S K+ P P IP
Sbjct: 346 KIAQLGAGDSHTIALTTDGRVWCWGTFRDNNGQFGLTSDGKVQPRPVEIP 395
>gi|195168454|ref|XP_002025046.1| GL26838 [Drosophila persimilis]
gi|194108491|gb|EDW30534.1| GL26838 [Drosophila persimilis]
Length = 828
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 83/217 (38%), Gaps = 31/217 (14%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P ++ D GC ++ A + SG L TWG +Y G +P P
Sbjct: 236 VPTKINSLDRCVKAVFCGCSYSAAITCSGNLYTWGRG-----TYARLGHGNSDDQPLPTV 290
Query: 102 ----TEASVVKAA--AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
TE ++ A +G AH + +T G VY WG D+G G+ + G
Sbjct: 291 VMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWG----------DADYGKLGN--GNLNG 338
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVT 207
S + E P + T+ + S AS G + S P L++
Sbjct: 339 SMSPVLVESLPKVQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSIPRLIS 398
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
+I VA G H L LS G+V+GWG Q+
Sbjct: 399 GLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQI 435
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 31/126 (24%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEH 264
G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG +P IP +
Sbjct: 98 GIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQV 157
Query: 265 AASGKDRPLLVRQGSV-----NSSGKAG--------RSY------------VKEIACGGR 299
AA G L G+ NS+G+ +SY V I+CG
Sbjct: 158 AAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYE 217
Query: 300 HSAVVT 305
H+AV+T
Sbjct: 218 HTAVLT 223
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
++S EE++NP TL +++ V+ G H+L + G+V+ WG G E
Sbjct: 27 SNSPLEETKNPEPIRTLETL-----------RVSLVSCGQEHSLAVCHRGRVFAWGAGSE 75
Query: 242 GQLGLGSRIKMVPTPHLIPCL 262
GQLG G + TP I L
Sbjct: 76 GQLGTGEVKGINFTPKKIKTL 96
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 99/294 (33%), Gaps = 76/294 (25%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA E G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 53 SLAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDN 112
Query: 123 GEVYTWGWRE---------------------------CVPSAKVTRDFGSAGSFQKDSTG 155
G Y WG E C P KV R + G+ T
Sbjct: 113 GHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKV-RQVAAGGTHSVVLTQ 171
Query: 156 KQSALPTEQA-PPSDKRAGEEVVKRRKTSSAR-----------------------EESEN 191
+ Q PP D + V+ + R E
Sbjct: 172 EGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQ 231
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+GD P V + + +AAGG H+ L+ G+V+ WG G G+LG G
Sbjct: 232 LGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDD-- 289
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ ++P +G+D + +++CGG HS +T
Sbjct: 290 --KSSRMVPLKVELLAGED--------------------IVQVSCGGTHSVALT 321
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 108/294 (36%), Gaps = 86/294 (29%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S P R+ G + + V G LA +E G L W
Sbjct: 171 QEGHVWTWGQPWPPGDIKQIS-----TPVRVQGLEKVR-VIAVGAFHNLALTEDGILWAW 224
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
G+ + Y G P P+ E S+V AAG H ++T GEVY WG
Sbjct: 225 GNNE-----YGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRG 279
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
E G G F D + + L E AGE++V
Sbjct: 280 E----------HGRLG-FGDDKSSRMVPLKVELL------AGEDIV-------------- 308
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
+V+ GG H++ L+ G+++ +G G G+LG G ++
Sbjct: 309 ------------------------QVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLT 344
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G D L + S + G+ K +ACGGRH+ +
Sbjct: 345 T-----------GQPMGVDIDLPPPK---TRSSRDGQWQAKYVACGGRHTLAIV 384
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P L+
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLV 659
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V + GV I VA G HTL ++ G V+ WG EGQLGLG V P LI L
Sbjct: 4287 PQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLG-HTNHVREPTLITVL 4345
Query: 263 E 263
+
Sbjct: 4346 Q 4346
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4025 PAGAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4083
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4084 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4125
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S + + FT
Sbjct: 4126 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTADGKMFTFGNGDYGRLGLG 4174
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4175 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN 4228
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4233 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4280
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A VV A G H +++T G+VY WG
Sbjct: 4281 ARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWG 4321
>gi|407399996|gb|EKF28499.1| hypothetical protein MOQ_007751 [Trypanosoma cruzi marinkellei]
Length = 644
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 124/333 (37%), Gaps = 83/333 (24%)
Query: 5 GSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
GS RE +E ++ K VV T P++ P+ PA G FA+
Sbjct: 217 GSARELDEHPDD-KSAVV--------TVPQRIPLFEQNPAVHLAA---------GYAFAM 258
Query: 65 ATSESGKLITWGSADDEGQSYL------TSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
A + + WG+ ++ GQS L S + E P +V+ G ++
Sbjct: 259 ALTAGHHVYFWGN-NNHGQSGLGPRYFDYSLRKVEEPTLVETLEGKRIVQLGCGSFFSLA 317
Query: 119 VTEAGEVYTWGWRECV-------PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP--PSD 169
+ + G +Y+WG EC+ A + F + S ST K++ + Q P++
Sbjct: 318 LGDDGTLYSWGLLECLGLGTTEEVRAAIDDPFIISESL---STEKRTVVLVPQIVHVPTE 374
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-------------SPCLVTLN-----PG 211
K + + + S + E FT P LV G
Sbjct: 375 H-------KLIRVHAGQWHSGVINTAGELFTWGVGYQGRLGHGDKEPALVPTKVRGALTG 427
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
++ VA G HT+ L++ G V+ WG GQ G S I V +P+ + LE A G
Sbjct: 428 QRVIDVACGSFHTVALTERGAVYCWGDNASGQCGAKSSIDAVTSPYRVVNLEFVAGG--- 484
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
K I+CG +H+ VV
Sbjct: 485 ------------------VAKAISCGRQHTVVV 499
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 131/358 (36%), Gaps = 94/358 (26%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWG-----------YLPGTSPEKSPILSPIPARLCGG 49
+ + G R+ + + K ++Y WG +L ++P + I +P R+
Sbjct: 130 LNLQGVMRQLAPERHK-KRQLLYSWGSGASGELGTQRFLDCSTPTLAQI-TPFGVRVV-- 185
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-----------TPEPF 98
DV G ++ A SE G + T+G+ D GQ L S + + P+
Sbjct: 186 ----DVALGA-NYSCALSEDGNIYTFGNGD-WGQLGLGSARELDEHPDDKSAVVTVPQRI 239
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
PL + V AAG+A +++T VY WG S R F D + ++
Sbjct: 240 PLFEQNPAVHLAAGYAFAMALTAGHHVYFWGNNNHGQSGLGPRYF--------DYSLRKV 291
Query: 159 ALPTEQAPPSDKRAGE-----------------------EVVKRRKTSSAREESENPASG 195
PT KR + E + T R ++P
Sbjct: 292 EEPTLVETLEGKRIVQLGCGSFFSLALGDDGTLYSWGLLECLGLGTTEEVRAAIDDPFII 351
Query: 196 DEFFTLSPCLVTLNPGV-------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
E + V L P + K+ +V AG H+ +++ G+++ WG G +G+LG G
Sbjct: 352 SESLSTEKRTVVLVPQIVHVPTEHKLIRVHAGQWHSGVINTAGELFTWGVGYQGRLGHGD 411
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ P L+P A R V ++ACG H+ +T+
Sbjct: 412 K-----EPALVPTKVRGALTGQR-------------------VIDVACGSFHTVALTE 445
>gi|302829689|ref|XP_002946411.1| hypothetical protein VOLCADRAFT_86667 [Volvox carteri f.
nagariensis]
gi|300268157|gb|EFJ52338.1| hypothetical protein VOLCADRAFT_86667 [Volvox carteri f.
nagariensis]
Length = 3723
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 94/249 (37%), Gaps = 34/249 (13%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
PG P++ + RL G + + V G L E G ++ WG + GQ+ +
Sbjct: 758 PGEMPQQLQVY-----RLKIGVTVRAVACGAL-HTLVALEGGGVMGWGD-NASGQA---T 807
Query: 89 GKHGE------TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW----RECVPSAK 138
G+ G TP P + VV +AG H +VT G V+ WG R + +A
Sbjct: 808 GRPGSPAVRISTPTRIPDFEQLEVVCISAGLLHSAAVTSTGSVWCWGSNRHGRLGIGAAT 867
Query: 139 VTRDF---GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG 195
T A +FQ G+ T P D + S ++ G
Sbjct: 868 ATSLLDHPAFAAAFQAKPPGR-----TYHHPDRDPLPNTAAMLAHAHHSPDGLHDDVKQG 922
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKM 252
T P L+PGV VA G RHTL + G VW WG LG+ R
Sbjct: 923 ---LTFPPTPAKLHPGVTALAVACGYRHTLAVDAEGGVWAWGSNATQTLGVPDFVDRAAP 979
Query: 253 VPTPHLIPC 261
V P L PC
Sbjct: 980 VRVPGLPPC 988
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 10/190 (5%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A +E G + TWG + S + P P + +V +AG +H +VTE+G
Sbjct: 148 IALTEVGNVYTWGYGAFGALGH-GSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESG 206
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
E+YTWG E + G+ + + + + + P + G S
Sbjct: 207 ELYTWGRDE----GEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKS 262
Query: 184 SAR-----EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ G P +V V + +VA GG H L+ G+V WGY
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGY 322
Query: 239 GGEGQLGLGS 248
GG GQLG G+
Sbjct: 323 GGNGQLGHGT 332
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 83/223 (37%), Gaps = 48/223 (21%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVPSAKVTRDF 143
+P+ P V A+AG H +++TE G VYTWG+ RE +P ++
Sbjct: 127 KPYVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP--RLLEGP 184
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
+ G +A TE +GE R R NP DE P
Sbjct: 185 WKDRIVHVSAGGSHTAAVTE--------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRP 236
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V V I V GG T+ L+ GQ+W WG +LG G+R P ++ LE
Sbjct: 237 TKVQ-ALDVPIALVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNW-KPKVVAALE 294
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ ++ACGG H+A +T
Sbjct: 295 DVT------------------------LVQVACGGFHAAALTQ 313
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKD----VCGGGCGFALATSESGKLITWGS 77
VY WGY + + RL G WKD V GG A A +ESG+L TWG
Sbjct: 156 VYTWGYGAFGALGHGSYERELLPRLLEG-PWKDRIVHVSAGGSHTA-AVTESGELYTWGR 213
Query: 78 ADDEGQSYLTSGKHGETPE-PFPLPTEASVVKAAAGWAHC-----VSVTEAGEVYTWG 129
DEG+ L G E PT+ + +C +++T++G++++WG
Sbjct: 214 --DEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQLWSWG 269
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 18/204 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG G L P+ +V A GW H +SV+ G
Sbjct: 43 AVTEDGELFGWGWGR-YGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG 101
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + L + + +G T+
Sbjct: 102 LYTYGWSK----------YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD 151
Query: 185 AR------EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ + +GD SP + K+ +++ G RHTL ++D V+ WG
Sbjct: 152 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGR 211
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCL 262
G GQLG G + TP ++ L
Sbjct: 212 GTNGQLGHGESVDR-NTPMILEAL 234
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+L P + G+ I VAAG HT +++ G+++GWG+G G LGLG R L+
Sbjct: 17 SLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDR-----NDRLV 71
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
P + G D+ ++V ACG RH+ V+ +
Sbjct: 72 PQKVSSVDG-DKMVMV-------------------ACGWRHTISVSSL 99
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 42 IPARL--CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P RL GD+ + GG +A + GKL WG + GQ +P
Sbjct: 123 VPHRLEALRGDNISQISGG-WRHTMALTTDGKLYGWG-WNKFGQVGAGDNIDHCSPIQIK 180
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P + V++ + GW H ++VT+ V++WG
Sbjct: 181 FPQDQKVIQISCGWRHTLAVTDKQNVFSWG 210
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 92/249 (36%), Gaps = 84/249 (33%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G + A + G L WGS EGQ L + ETP+ L +SV + G+ H
Sbjct: 147 GTDHSAALTTDGTLYMWGSGS-EGQLGLGNTDSVETPKE--LKFHSSVSWVSCGYYHTAI 203
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
VT+ G++YT+G +E FG G L +Q E+
Sbjct: 204 VTDDGKLYTFGEKE----------FGKLG------------LTEDQL--------EDTTT 233
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
+ S E KI VA GG HT ++SD+G ++ +G
Sbjct: 234 PKHVESITE-------------------------KIKLVACGGAHTAVISDVGNLYTFGD 268
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCL-EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
G GQLG G + + P + L EH K ++CG
Sbjct: 269 GMHGQLGNGPSLLQLSLPQKVARLSEHKC-------------------------KYVSCG 303
Query: 298 GRHSAVVTD 306
H+AV+T+
Sbjct: 304 DNHTAVITE 312
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 91/234 (38%), Gaps = 45/234 (19%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
+ + G H +TE+G +YT+G + D+G G T K + + +
Sbjct: 39 MHISCGDEHSAIITESGRLYTFG----------SNDWGQLGLGHMKPTTKPGCVKSLKQE 88
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAAG 220
+ A T + R S S GD SP L+ L P K ++AG
Sbjct: 89 GVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINL-PEQKYKLLSAG 147
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGS--------RIKMVPTPHLIPC-LEHAASGKDR 271
H+ L+ G ++ WG G EGQLGLG+ +K + + C H A D
Sbjct: 148 TDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDD 207
Query: 272 PLLVRQGSVNSSGKAGRS------------------YVKEIACGGRHSAVVTDM 307
L G GK G + +K +ACGG H+AV++D+
Sbjct: 208 GKLYTFGE-KEFGKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDV 260
>gi|294816128|ref|ZP_06774771.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
gi|326444463|ref|ZP_08219197.1| regulator of chromosome condensation-like protein [Streptomyces
clavuligerus ATCC 27064]
gi|294328727|gb|EFG10370.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
Length = 406
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P R+ G K V G C F+LA ESG++ +WG GQ L +G + + P +
Sbjct: 173 LPDRVQGLPKVKQVSAG-CDFSLALLESGEVYSWGRG-MYGQ--LGNGDYAVSSVPVQVT 228
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWR---ECVPSAKVTRDFGSAGSFQKDSTGKQS 158
++V AG H ++ T A V +WG+ + S V+ ++ KD + ++
Sbjct: 229 DLTNIVSIDAGCHHALAQTNANTVKSWGYNLYGQLGNSTNVSSSKAVDVAWLKDVSEIEA 288
Query: 159 ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK-- 216
A SD VV + + E DE F L+ V N V I +
Sbjct: 289 GAFHNYAKGSD-----SVVWGWGNNQYGQLLEK----DETFELNVSRVNHNAPVTIERLK 339
Query: 217 ----VAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+AAG RH + ++ D V+ WG+ EGQLG G+ + + +++
Sbjct: 340 GVQHLAAGLRHGVAVIGDT--VFTWGFNSEGQLGNGTTVARFESVNIL 385
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI---KMVPT-PHLIPCLEH 264
PG+ KI VAAGGRH L L GQV+ WG GQLG +R +++P +P ++
Sbjct: 127 PGLQKIKDVAAGGRHALALDTDGQVYSWGDNSYGQLG-NNRTGDDRILPDRVQGLPKVKQ 185
Query: 265 AASGKDRPL-LVRQGSVNSSGK 285
++G D L L+ G V S G+
Sbjct: 186 VSAGCDFSLALLESGEVYSWGR 207
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 74/199 (37%), Gaps = 31/199 (15%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FALA + L +WG D L +G + P +P + AAG H +++
Sbjct: 92 FALALVGT-TLKSWG---DNASGQLGNGGRADQTVPAVVPGLQKIKDVAAGGRHALALDT 147
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE-QAPPSDKRAGEEVVKRR 180
G+VY+WG S G + TG LP Q P K +V
Sbjct: 148 DGQVYSWG-------------DNSYGQLGNNRTGDDRILPDRVQGLPKVK----QVSAGC 190
Query: 181 KTSSAREESENPAS---------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
S A ES S G+ + +S V + I + AG H L ++
Sbjct: 191 DFSLALLESGEVYSWGRGMYGQLGNGDYAVSSVPVQVTDLTNIVSIDAGCHHALAQTNAN 250
Query: 232 QVWGWGYGGEGQLGLGSRI 250
V WGY GQLG + +
Sbjct: 251 TVKSWGYNLYGQLGNSTNV 269
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 18/208 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G LA + +GKL +WGS D T K+ P+ + G H ++
Sbjct: 222 GINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMA 281
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-APPSDKRAGEE-- 175
++++G V+ WG FG G + L T Q A GEE
Sbjct: 282 ISKSGAVFGWG----------KNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFS 331
Query: 176 ---VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMG 231
V + G+ + P V G +T+++ G RHTL ++ G
Sbjct: 332 VFLTVDGGVFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRG 391
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+V+ WG GG GQLG + + V TP ++
Sbjct: 392 RVYAWGLGGAGQLG-NNITRSVATPQVV 418
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 27/104 (25%)
Query: 206 VTLNPGVK---ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ L PG+ KVA G HTL +++ GQ++ WG EGQLGL S+ +LI C+
Sbjct: 152 LQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSK-------NLIECV 204
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
H +VR G S V ++ACG H +T+
Sbjct: 205 PH---------MVR--------ALGTSVVVQVACGINHVLALTN 231
Score = 45.1 bits (105), Expect = 0.039, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ +VA G H L L++ G+++ WG +GQLGLG+ +K P LI L
Sbjct: 216 VVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSL 264
Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCV 117
G LA +E G+L +WGS + EGQ L S E P + VV+ A G H +
Sbjct: 169 GAHHTLAVNEWGQLFSWGS-NAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227
Query: 118 SVTEAGEVYTWG 129
++T G++Y+WG
Sbjct: 228 ALTNNGKLYSWG 239
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 472 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 526
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +V+E GE+YTWG DFG G DS + +PT S+
Sbjct: 527 YRHSAAVSEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 570
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P +V G+ I KV AG
Sbjct: 571 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGS 630
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 631 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 666
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G+ I VA G HTL+LS G V+ WG EGQLGLG V P L+ L+
Sbjct: 4365 GIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLG-HTNHVREPTLVTTLQ 4416
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 84/220 (38%), Gaps = 55/220 (25%)
Query: 55 VCGGGCGFA-------LATSE-SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV 106
VCG C F LA E S + G++DD + S G +
Sbjct: 4108 VCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVV--------TQL 4159
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
V + H +++TE+GEV++WG D+G G D + + Q
Sbjct: 4160 VTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSDRQRRPRQIEALQ-- 4207
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS-----------------PCLVTLN 209
GEEVV + S + S + + FT P VT
Sbjct: 4208 ------GEEVV---QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTAL 4258
Query: 210 PGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
G + +VA G HTL++S D VW +G G G+LGLG+
Sbjct: 4259 EGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGN 4298
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ GK+ T+G G +
Sbjct: 4303 SSPQKVDVL-------CGIGIKKVACG--TQFSVALTKDGKVFTFGQDRLIGLPEGRARN 4353
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
H P+ P + + A G H + ++ G+VYTWG
Sbjct: 4354 HNR-PQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWG 4391
>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 732
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G F+LA S GK+ WG+ + + +Y + TP+ + + VVK AAG A
Sbjct: 151 IAAGLEFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQI--VNNLSGVVKIAAGSAW 208
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
C+++ G V+TWG + VP +D G + Q ++ S +
Sbjct: 209 CLALKNDGTVWTWG-AQKVPMGNDDQD----GEVTNITNLTQINGISDVISVSAGYSHSL 263
Query: 176 VVKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
+K T E S D+ + SP V ++P +T V+AG T+ L++ G V
Sbjct: 264 ALKGDGTVWGWGSNELLQLGSHDQQWFDSP--VQISPLKNVTTVSAGAYLTMALTNDGTV 321
Query: 234 WGWGYGGEGQLGLGSRIKMVP 254
W G GQLG G + +P
Sbjct: 322 WTLGGNIYGQLGNGIKADSLP 342
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 80/210 (38%), Gaps = 27/210 (12%)
Query: 36 SPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+P+L+ AR S G F LA G + WG + EGQ L G P
Sbjct: 32 TPVLASTDARPAAASS---QLAAGANFGLAVDAQGNVWAWGD-NSEGQ--LGQGVADTNP 85
Query: 96 EPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
P+ + +V+ +AG H +++ G V+ WG E + ++ D S + +
Sbjct: 86 VATPIQVKDLTNVISVSAGGVHALALKADGTVWAWGNNE---TDQLGVDQASPIAIPRQV 142
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTS------SAREESENPASGDEFFTLSPCLVT 207
G Q+ + AG E + A E + D +P +V
Sbjct: 143 EGLQNIVAIA--------AGLEFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVN 194
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
GV K+AAG L L + G VW WG
Sbjct: 195 NLSGV--VKIAAGSAWCLALKNDGTVWTWG 222
>gi|145334859|ref|NP_001078775.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|62320260|dbj|BAD94537.1| UVB-resistance protein UVR8 - like [Arabidopsis thaliana]
gi|332010007|gb|AED97390.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 276
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 3/144 (2%)
Query: 115 HCVSVTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++TE+GE+Y WG E R G S K +P
Sbjct: 46 HTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFT 105
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
+ + + + GD P V GV+IT++A GG H+L L++ G+
Sbjct: 106 MALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGK 165
Query: 233 VWGWGYGGEGQLGLGS-RIKMVPT 255
V WG+GG GQLG S R + VPT
Sbjct: 166 VLSWGHGGHGQLGSSSLRNQKVPT 189
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGW 113
CGG F +A ++ G+L WG+ + L G + EP P+P+ + + A G
Sbjct: 100 CGGF--FTMALTKEGQLWNWGANSN---YELGRGDNLGGWEPMPVPSLEGVRITQIACGG 154
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++TE G+V +WG G G S Q +PTE +DK
Sbjct: 155 YHSLALTEEGKVLSWG-------------HGGHGQLGSSSLRNQK-VPTEIEALADK--- 197
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
KI +A+GG + ++D G++
Sbjct: 198 ---------------------------------------KIVFIASGGSSSAAITDGGEL 218
Query: 234 WGWGYGGEGQLGLGSRIKMVPTP 256
W WG + QLG+ ++ TP
Sbjct: 219 WMWGNAKDFQLGVPGLPEIQTTP 241
>gi|440792449|gb|ELR13671.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 297
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 65/219 (29%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF--QK 151
TP+ LP +VV+ AAGW+H +++ +G+V WG + F G ++
Sbjct: 15 TPQRVVLPE--TVVQVAAGWSHSLALAASGKVLCWG----------SSGFNQMGCLYEEE 62
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
D+ G + E+A R+ +++VKRR + P +G L+
Sbjct: 63 DAAGTE-----EEA----ARSQQQLVKRRLVPA-------PMAG------------LHSS 94
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ +T +AAG RH+ +++ G + G+G G+LG G + TP L+ H A + R
Sbjct: 95 IVVTCIAAGMRHSALVTQEGHLLTLGHGKFGELGHGD-LATRSTPTLV---AHLAESRLR 150
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSYP 310
V ++ACG +H+ +T P
Sbjct: 151 -------------------VAQVACGQKHTVCLTAGGVP 170
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 102/282 (36%), Gaps = 98/282 (34%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG 89
G PE L +P D+ G +LA GK+ WG D GQ L +G
Sbjct: 69 GKQPEPIQALVNLPV---------DLVSCGKEHSLAVCHKGKVFAWGVGSD-GQ--LGTG 116
Query: 90 KHGET---PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
K E P+ T +++ + G+ H +++++ G+V++WG
Sbjct: 117 KFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWG----------------- 159
Query: 147 GSFQKDSTGKQSALPTE---QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
K+S G Q L E QA P R+ E
Sbjct: 160 ----KNSHG-QLGLGQEFPSQASPQRVRSLE----------------------------- 185
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G+ + +VAAGG H+ LS G +GWG GQL
Sbjct: 186 -------GIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQL------------------- 219
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
A SG + +LV+ S G V I+CG H+AV+T
Sbjct: 220 -AFSGNN--VLVQSYKPRSVGALKNLGVVYISCGYEHTAVLT 258
>gi|340503755|gb|EGR30283.1| hypothetical protein IMG5_135970 [Ichthyophthirius multifiliis]
Length = 361
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 10/202 (4%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSVTE 121
ATS++G++ TWG + GQ L G +P + + +++ G H V T
Sbjct: 91 ATSKTGQVFTWGLGN-FGQ--LGKGNLANFNQPDLVRGDLEGKNILATVCGGYHNVCFTN 147
Query: 122 AGEVYTWGWREC----VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
G Y+WG E + S+ + F K+ + + T A +D E
Sbjct: 148 EGYTYSWGCLEVDQQNIKSSNIPYPMMLNSEFIKEENNPFNMIITYIAAGADYCMAIEQK 207
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ +E + G F P V G + +A G H+L L++ G+++ G
Sbjct: 208 RIIYAWGRNKEGQLGIGGISNFVDQPSKVQGLDGNLMKSIACGEEHSLFLTESGRIFACG 267
Query: 238 YGGEGQLGLGSRIKMVPTPHLI 259
+G+LGLG R ++ TP I
Sbjct: 268 SSKDGKLGLGIRNTILMTPQEI 289
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 26/109 (23%)
Query: 203 PCLVTL--NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LV N +KI ++ G H+ S GQV+ WG G GQLG G+
Sbjct: 66 PQLVRFLDNDNIKIQHISCGQYHSAATSKTGQVFTWGLGNFGQLGKGN------------ 113
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSY 309
+ ++P LVR G + CGG H+ T+ Y
Sbjct: 114 -----LANFNQPDLVR-------GDLEGKNILATVCGGYHNVCFTNEGY 150
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 83/217 (38%), Gaps = 31/217 (14%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P ++ D GC ++ A + SG L TWG +Y G +P P
Sbjct: 662 VPTKITLLDRCVKAVFCGCSYSAAITCSGNLYTWGRG-----TYARLGHGNSDDQPLPTV 716
Query: 102 ----TEASVVKAA--AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
TE ++ A +G AH + +T G VY WG D+G G+ + G
Sbjct: 717 VMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWG----------DADYGKLGN--GNLNG 764
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVT 207
S + E P + T+ + S AS G + S P L++
Sbjct: 765 SMSPVLVESLPKVQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLIS 824
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
+I VA G H L LS G+V+GWG Q+
Sbjct: 825 GLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQI 861
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3348 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3402
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3403 HCLAVTDAGQVYAWG 3417
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4323 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4365
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P LV +N V +IACG HSA +T
Sbjct: 4366 PKLVEH--LNGMN------VADIACGSAHSAAIT 4391
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4424 LLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4478
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4479 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHGS----- 4517
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4518 ------------VDHVRRPKKVAALQ-----------------------GKKIISIATGS 4542
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4543 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4583
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 31/199 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA + GK+ +WG +D L G +P + T S + A G +H +++
Sbjct: 3194 ALALTLDGKVFSWGEGED---GKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAIS 3250
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
GE+YTWG E +G G + K P A + +R + R
Sbjct: 3251 SQGELYTWGLGE----------YGRLGHGDNSTQLK----PKLVAALAGRRVIQVACGSR 3296
Query: 181 --KTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+T + E+ + GD F + +P + G+ + ++ G + +L L+
Sbjct: 3297 DAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALT 3356
Query: 229 DMGQVWGWGYGGEGQLGLG 247
G+VW WG G +LG G
Sbjct: 3357 RAGEVWTWGKGDYYRLGHG 3375
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 3182 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3224
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P LV ++ S ++++ACG HSA ++
Sbjct: 3225 PRLVE--TLRSKK------IRDVACGSSHSAAIS 3250
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 33/207 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG ++GK+ G + L G P P LP VVK A G
Sbjct: 3134 AGGSKSLFIVGQNGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3190
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + T ++ K+
Sbjct: 3191 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVETLRS----KKI 3236
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LV G ++ +VA G R
Sbjct: 3237 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSR 3296
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLG 247
TL L++ G V+ WG G G+LG G
Sbjct: 3297 DAQTLALTEDGAVFSWGDGDFGKLGRG 3323
>gi|296134345|ref|YP_003641592.1| Ig domain-containing protein group 2 domain-containing protein
[Thermincola potens JR]
gi|296032923|gb|ADG83691.1| Ig domain protein group 2 domain protein [Thermincola potens JR]
Length = 4140
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 91/232 (39%), Gaps = 39/232 (16%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
P +PE+ P L+ + A GG +A G + TWG +D GQ L
Sbjct: 2484 PHKNPEQVPGLTGVTALAPGGYH-----------VVALKNDGTVWTWGK-NDSGQ--LGD 2529
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
G + P +P V AAG H V + G V+ WG +G G+
Sbjct: 2530 GTYTSRFSPGQVPGLTGVKAVAAGANHTVVLKTDGTVWAWG----------NNMYGQLGT 2579
Query: 149 FQKDSTGKQSALPTEQAPPSDK----RAG-EEVVKRRKTSS----AREESENPASGDEFF 199
S ++ P Q P D AG + RR + R +G
Sbjct: 2580 --SPSVLAKTYSPV-QIPGIDSVVEIGAGIWHTLARRADGTVWAWGRNIEGQVGNGSASA 2636
Query: 200 TL-SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ SP V+ GV TKVAAGG H L L G VW WG +GQLG G+ +
Sbjct: 2637 VVDSPAQVSGLTGV--TKVAAGGYHNLALRSDGTVWAWGRNDKGQLGTGNTV 2686
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 66/240 (27%), Positives = 95/240 (39%), Gaps = 29/240 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHC 116
G G++LA G + WG +D+GQ L +G P P +P V A G H
Sbjct: 2451 GTGYSLALKPDGTVWAWG-INDQGQ--LGNGGQDLNPHKNPEQVPGLTGVTALAPGGYHV 2507
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
V++ G V+TWG + + G + S G+ L +A AG
Sbjct: 2508 VALKNDGTVWTWGKND-------SGQLGDGTYTSRFSPGQVPGLTGVKAVA----AGANH 2556
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLN------PGV-KITKVAAGGRHTLILSD 229
KT N G SP ++ PG+ + ++ AG HTL
Sbjct: 2557 TVVLKTDGTVWAWGNNMYGQ--LGTSPSVLAKTYSPVQIPGIDSVVEIGAGIWHTLARRA 2614
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL----EHAASGKDRPLLVRQGSVNSSGK 285
G VW WG EGQ+G GS +V +P + L + AA G L G+V + G+
Sbjct: 2615 DGTVWAWGRNIEGQVGNGSASAVVDSPAQVSGLTGVTKVAAGGYHNLALRSDGTVWAWGR 2674
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 210 PGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHLIPCLEHA 265
PG+ +T +A GG H + L + G VW WG GQLG G SR P L A
Sbjct: 2492 PGLTGVTALAPGGYHVVALKNDGTVWTWGKNDSGQLGDGTYTSRFSPGQVPGLTGVKAVA 2551
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS 289
A +L G+V N G+ G S
Sbjct: 2552 AGANHTVVLKTDGTVWAWGNNMYGQLGTS 2580
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 475 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 529
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +V+E GE+YTWG DFG G DS + +PT S+
Sbjct: 530 YRHSAAVSEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 573
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P +V G+ I KV AG
Sbjct: 574 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGS 633
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 634 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 669
>gi|392305396|emb|CCI71759.1| putative E3 ubiquitin-protein ligase HERC4 [Paenibacillus polymyxa
M1]
Length = 394
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 129/323 (39%), Gaps = 54/323 (16%)
Query: 18 KETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
K+ ++ WG+ GT ++ P+ + D+ K+V GG F LA G +
Sbjct: 99 KDGTIWSWGFASYGELGTGNKRDTARVPVKNKYI--DNVKEVRAGGQ-FTLALKNDGTVW 155
Query: 74 TWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+G ++ GQ + T G + +P + +V AG + ++ + +++ WG
Sbjct: 156 AYGE-NNFGQLGIGTKGVSAFSVKPVQVQGLEDIVAIDAGDSFGAALDKNNQLWVWG--- 211
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGEEVVKRRKTS-----S 184
G G+ +D K++ L Q D + AG + + S S
Sbjct: 212 ----------RGYDGALGQDD--KENQLTPVQYRIDDIKTFTAGADRIYVLTNSGEVYAS 259
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
S G F SP L+ ++ + ++ AG T L + G +WGWG EGQ+
Sbjct: 260 GSNTSGKLGDGTSTFRRSPVLINISD---VNRLKAGKTQTFALKNDGTLWGWGTNNEGQV 316
Query: 245 GLGSRIKMVPTPH---------LIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSY 290
G G+ + V P L + +A+G L G+V N +G+ G
Sbjct: 317 GDGTDVFSVKVPSQVVDDTNTPLTDVVAFSAAGTHSHALTADGTVWSWGFNRNGELGIGN 376
Query: 291 VKEIACGGRHSAVVTDMSYPIAR 313
K+ +++A T+ P ++
Sbjct: 377 TKQ-----QNAATKTNFPNPFSK 394
>gi|196004750|ref|XP_002112242.1| hypothetical protein TRIADDRAFT_56074 [Trichoplax adhaerens]
gi|190586141|gb|EDV26209.1| hypothetical protein TRIADDRAFT_56074 [Trichoplax adhaerens]
Length = 417
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 59/187 (31%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTE 121
LA ++ + WG + + K P+ L + +V+ AAG + C++ TE
Sbjct: 250 VLALADDSSVYGWGDTEYSQLQFDDDAKQICLPKRISLDCIKEKIVQVAAGGSFCLACTE 309
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G V+ WG FG+ G G E++ R+
Sbjct: 310 TGNVFVWG-------------FGALG------------------------VGNEIMDCRE 332
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
P L+ G K+ K+A H + LSD G+V+ WG G
Sbjct: 333 ---------------------PRLIRFPDGAKVKKIACSINHAVALSDTGKVYTWGRGSF 371
Query: 242 GQLGLGS 248
G+LG+G+
Sbjct: 372 GKLGIGN 378
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 42 IPARL---CGGDSWKDVCGGGCGFALATSESGKLITWG-SADDEGQSYLTSGKHGETPEP 97
+P R+ C + V GG F LA +E+G + WG A G + P
Sbjct: 281 LPKRISLDCIKEKIVQVAAGG-SFCLACTETGNVFVWGFGALGVGNEIMDC----REPRL 335
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
P A V K A H V++++ G+VYTWG
Sbjct: 336 IRFPDGAKVKKIACSINHAVALSDTGKVYTWG 367
>gi|26351011|dbj|BAC39142.1| unnamed protein product [Mus musculus]
Length = 163
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 28/144 (19%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+ K AAG H V ++E G++Y WGW E Q ALPT
Sbjct: 1 MAKVAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG 38
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGG 221
++ +A E +EE +G F + P L+ L G + G
Sbjct: 39 --TENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGS 96
Query: 222 RHTLILSDMGQVWGWGYGGEGQLG 245
RHT +++ G+++ WG+G GQLG
Sbjct: 97 RHTAVVTRTGELYTWGWGKYGQLG 120
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ KVAAGG H++ LS+ G ++ WG+ GQL L +R E G L
Sbjct: 1 MAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEEL 60
Query: 274 LVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVT 305
V + A + + + +CG RH+AVVT
Sbjct: 61 AVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVT 103
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 73/305 (23%), Positives = 106/305 (34%), Gaps = 89/305 (29%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKD-VCGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G E++ + P + G K+ VCGG L G + T GS G L
Sbjct: 13 GIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLL--HDGSVYTCGS---NGCGQLGH 67
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
K G +PE + + G AH ++V E G+V+ WG AG
Sbjct: 68 NKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWG----------------AGD 111
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTL 208
G Q L T +A R + + R
Sbjct: 112 ------GGQLGLGTTEAAVRIPRLIKRLCDHR---------------------------- 137
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL--GSRIKMVPTP----HLIPCL 262
I +V G +H + LS GQ++ WG GQLGL G K+ P P IP
Sbjct: 138 -----IAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLA 192
Query: 263 EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRH 300
+ A G L G+V N +G+ G + +++ I+CG H
Sbjct: 193 KITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEH 252
Query: 301 SAVVT 305
+A +T
Sbjct: 253 TAALT 257
Score = 43.1 bits (100), Expect = 0.18, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA--LATSESGKLITWGSADDEGQSYL 86
PGTSPE L G + + CG A +A +E G++ WG+ D
Sbjct: 70 PGTSPE-----------LVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLG 118
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
T+ P + + + G HC+++++ G+++TWG
Sbjct: 119 TTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWG 161
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 22 VYMWGYLPGT-----SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
V+ WG G + E + + + RLC + +CG +A S+ G+L TWG
Sbjct: 104 VFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQ--HCIALSKDGQLFTWG 161
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAAGWAHCVSVTEAGEVYTWG 129
+ GQ L GK GE + FP P ++ + K AG H +++ +G V+ WG
Sbjct: 162 Q-NTSGQ--LGLGK-GEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWG 214
>gi|392564985|gb|EIW58162.1| RCC1/BLIP-II [Trametes versicolor FP-101664 SS1]
Length = 547
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 45/155 (29%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV+AAAG V +TE+G+V+ +G E +
Sbjct: 185 VVQAAAGITFSVVLTESGKVFAFGSEE-------------------------------KG 213
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
++ +AGE +V K++ E P LV KI K+A G +H +
Sbjct: 214 QLANGQAGERIVSAGKSAFDYETE-------------PILVRGLVERKIVKIACGSQHAI 260
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L G+V+GWGY G +LGLG++ + P LIP
Sbjct: 261 ALDSEGRVYGWGYNGYCRLGLGNQQDAL-VPKLIP 294
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 59 GCGFALATSESGKLITWGSAD-------DEGQSYLTSGKHGETPEPFPLPT----EASVV 107
G F++ +ESGK+ +GS + G+ +++GK E P+ E +V
Sbjct: 191 GITFSVVLTESGKVFAFGSEEKGQLANGQAGERIVSAGKSAFDYETEPILVRGLVERKIV 250
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR 131
K A G H +++ G VY WG+
Sbjct: 251 KIACGSQHAIALDSEGRVYGWGYN 274
>gi|397627901|gb|EJK68660.1| hypothetical protein THAOC_10141, partial [Thalassiosira oceanica]
Length = 447
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 25/112 (22%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--------- 93
P L G D+ + GG F+LA S+ G + WG ++EGQ G GE
Sbjct: 267 PVELIGNDNISQIAGGSA-FSLALSQEGVIYGWGR-NNEGQLGTGMGMSGECQPSLLVPR 324
Query: 94 ---------TPEPFPLPTEA-----SVVKAAAGWAHCVSVTEAGEVYTWGWR 131
E PLP E +VVK +AG AH +VT GE++TWG
Sbjct: 325 VCCCSNSVYAMEALPLPVEGNLEGKTVVKISAGKAHSAAVTSEGELFTWGMN 376
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 117/289 (40%), Gaps = 58/289 (20%)
Query: 40 SPIPARL-CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
SP R+ CG + G FA+ ++++G+L G D K P
Sbjct: 112 SPHITRIDCGASGSAFILSDGRSFAVGSNKNGQL---GVGSDT--------KETSKPVLL 160
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-------RECV--------PSAKVTRDF 143
LP V KAA G +TE G++YT G+ C+ P+ +
Sbjct: 161 DLP---PVAKAALGNNFSALLTEGGDIYTCGFGGSRMNGMGCLGHGDDTARPAPTLVNSL 217
Query: 144 GSAGSFQKD-STGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
G + KD G+ S AL TE EV+ S R N + D+ +
Sbjct: 218 VEDGCYAKDVHVGEYSMTALTTEG----------EVLTCGSGSYGR--LGNLETVDQLY- 264
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P V L I+++A G +L LS G ++GWG EGQLG G + P L+
Sbjct: 265 LEP--VELIGNDNISQIAGGSAFSLALSQEGVIYGWGRNNEGQLGTGMGMSGECQPSLLV 322
Query: 261 ----CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
C ++ + L +G++ G++ VK I+ G HSA VT
Sbjct: 323 PRVCCCSNSVYAMEALPLPVEGNLE-----GKTVVK-ISAGKAHSAAVT 365
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 30/172 (17%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR-------------ECVPSAKVTRD 142
EP L ++ + A G A +++++ G +Y WG EC PS V R
Sbjct: 266 EPVELIGNDNISQIAGGSAFSLALSQEGVIYGWGRNNEGQLGTGMGMSGECQPSLLVPRV 325
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-- 200
+ S ALP P G+ VV K S+ + S S E FT
Sbjct: 326 CCCSNSVY-----AMEALPL---PVEGNLEGKTVV---KISAGKAHSAAVTSEGELFTWG 374
Query: 201 ----LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
L P L + KI VA G +T++L + G+++ G G G LGL S
Sbjct: 375 MNLSLDPKLESSLLHTKIVDVACGEYYTMVLDEAGRLYSLGRGKTGVLGLAS 426
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 95/259 (36%), Gaps = 29/259 (11%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
D K V GG ++A + G++ TWG + + P + +
Sbjct: 156 DPAKCVALGGV-HSVALTSLGQVFTWGYGGFGALGHCVYHRE-LLPRLVQGISNEKIRHI 213
Query: 110 AAGWAHCVSVTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A H ++TE GEVYTWG E R G S K +P
Sbjct: 214 ATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFC 273
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ + + + G++ P + GV++ ++A+GG H+L L
Sbjct: 274 GGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLAL 333
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
+D G+V WG+GG GQLG S I+ P +I L
Sbjct: 334 TDEGKVLSWGFGGHGQLGHPS-IQNQKIPMVIDAL------------------------A 368
Query: 288 RSYVKEIACGGRHSAVVTD 306
V IACGG SA +TD
Sbjct: 369 DQRVVYIACGGSTSAAITD 387
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 31/109 (28%)
Query: 202 SPCLV-TLNPGVKITK-VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P V TLNP + K VA GG H++ L+ +GQV+ WGYGG G LG
Sbjct: 144 NPVFVPTLNPNLDPAKCVALGGVHSVALTSLGQVFTWGYGGFGALG-------------- 189
Query: 260 PCLEHAASGKDRPLLVR--QGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
C+ H R LL R QG N ++ IA G H+A +T+
Sbjct: 190 HCVYH------RELLPRLVQGISNEK-------IRHIATSGTHTAAITE 225
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 91/251 (36%), Gaps = 74/251 (29%)
Query: 33 PEKSPILS-PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE--GQSYLTSG 89
P K L+ P+ A CGG F +E G++ WG+ + G+ T G
Sbjct: 258 PSKVKALTVPVAAVFCGGF-----------FTAVLTEEGQIWNWGANSNYELGRGNKTGG 306
Query: 90 KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
P+P P V++ A+G H +++T+ G+V +WG FG G
Sbjct: 307 WQ---PKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWG-------------FGGHGQL 350
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
S Q +P +D+R
Sbjct: 351 GHPSIQNQK-IPMVIDALADQR-------------------------------------- 371
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HLIPCLEHAASG 268
+ +A GG + ++D G+++ WG + QLG+ ++ P P ++ +E G
Sbjct: 372 ----VVYIACGGSTSAAITDEGKLYMWGNAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLG 427
Query: 269 KDRPLLVRQGS 279
+ L V G+
Sbjct: 428 PHKVLSVAVGA 438
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 46/268 (17%)
Query: 18 KETVVYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
K+ VY WG G TS ++ P L I A L G D CGG ++ A S +G
Sbjct: 532 KDYEVYSWGNGDGGRLGHGDTSTKEEPTL--IQA-LKGKDIIDVECGGT--YSAAISANG 586
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG--WAHCVSVTEAGEVYTW 128
L TWG + G+ + + TP ++ ++K A G +AH + +T G+VY+W
Sbjct: 587 ALYTWGRGN-YGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSW 645
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G D+G G D S LP + + + + + + E+
Sbjct: 646 G----------DGDYGKLGRGGSDG----SKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 189 SE-------------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+P + F P +V + K+ V+ G H L L+D G+V+G
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRF---PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYG 748
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
WG Q+ S + V P LI L+
Sbjct: 749 WGKNENKQICDSSEL-FVQQPRLIEALK 775
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 95/244 (38%), Gaps = 35/244 (14%)
Query: 22 VYMWGY-----LPGT--SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
V++WG L G S K P+ S ++L W GG S GKL
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL-----WPIHIAGGSKSLFIVSHEGKLYA 2950
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTWGWRE 132
G + G+ L + P P P ++ + K A +G H +++T G+V++WG E
Sbjct: 2951 CGEGTN-GRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 3009
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE----- 187
G D AL +++ D G +S+ E
Sbjct: 3010 -------DGKLGHGNRLNLDKPKMIEALRSKKI--RDIACGSS--HSAAITSSGELYTWG 3058
Query: 188 --ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQ 243
E GD L P L+ G +I +VA G R TL L+D G V+ WG G G+
Sbjct: 3059 LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGK 3118
Query: 244 LGLG 247
LG G
Sbjct: 3119 LGRG 3122
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA +++G++ TWG D + S +H P + V+ A G HC++
Sbjct: 3147 GAQFSLALTKTGEVWTWGKGDYFRLGH-GSDQHVRKPTVIESLKDKKVIHVAVGALHCLA 3205
Query: 119 VTEAGEVYTWG 129
VT+ G+VY WG
Sbjct: 3206 VTDTGQVYAWG 3216
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 27/108 (25%)
Query: 200 TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
L P L+ V I K+A +GG+H L LS V+ WG G +G+LG G+R+ TP
Sbjct: 3943 VLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPK 4001
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
LI L+ + +IACGG HSA +T
Sbjct: 4002 LIEALQGYE------------------------IIDIACGGAHSAAIT 4025
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T G+H P+ ++ A G HCV+
Sbjct: 4123 GSQFSVALTRSGSVYTWGKGDYHRLGHGT-GEHVRRPKKVAALQGKKIISIATGSLHCVA 4181
Query: 119 VTEAGEVYTWG 129
++ GEV+TWG
Sbjct: 4182 CSDEGEVFTWG 4192
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 27/95 (28%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H + L+ G+V+ WG G +G+LG G+R+ + D+
Sbjct: 2981 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNL-----------------DK 3023
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVT 305
P ++ +A RS +++IACG HSA +T
Sbjct: 3024 PKMI---------EALRSKKIRDIACGSSHSAAIT 3049
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 73/212 (34%), Gaps = 66/212 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P E+ V+K
Sbjct: 4068 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPKKIESLAGLGVIKVEC 4122
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4123 GSQFSVALTRSGSVYTWG----------------KGDYHRLGHG---------------- 4150
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
GE V + +K ++ + G KI +A G H + SD G
Sbjct: 4151 TGEHVRRPKKVAALQ------------------------GKKIISIATGSLHCVACSDEG 4186
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+V+ WG EGQLG + P L+ L+
Sbjct: 4187 EVFTWGDNDEGQLG-DDTTNAIQRPRLVSALQ 4217
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 25/89 (28%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ VA G H L ++D GQV+ WG GQ G G+ I + P L+ LE
Sbjct: 3192 KVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI-VNRKPALVHGLEDV------- 3243
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
++ +ACG HS
Sbjct: 3244 -----------------HINRVACGSSHS 3255
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 15/84 (17%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-------ETPEPFPLPTEAS 105
K G LA S + +WG DD GK G ETP+
Sbjct: 3959 KIAVNSGGKHCLALSADNDVYSWGEGDD--------GKLGHGNRLACETPKLIEALQGYE 4010
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
++ A G AH ++T G++YTWG
Sbjct: 4011 IIDIACGGAHSAAITSTGQLYTWG 4034
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 89/220 (40%), Gaps = 36/220 (16%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSG--KHGETPEPFPLPTE 103
LCG G G +AT++ G++ WG G S L +G HG TP
Sbjct: 71 LCGKKIVSLSYGTGPHVVIATAD-GEVFAWGH---NGYSQLGNGTTNHGLTPALVSTNLL 126
Query: 104 AS-VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V + A G H +++T GEV+ WG+ ++G ST Q PT
Sbjct: 127 GKRVTEVACGSHHTIALTADGEVFAWGYN-------------NSGQVGSGSTANQ---PT 170
Query: 163 EQAPPSDKRAGEEV---VKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLN 209
+ S ++ V + + + + E G+ +PC +
Sbjct: 171 PRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRIAAL 230
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
GV + +VA G HTL L+D G V+ WG GQLG G++
Sbjct: 231 QGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNK 270
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P R+ K V GCG ++A ++G++ WG
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGY- 207
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ GQ L + + +TP +VV+ A G+AH +++T+ G VY WG
Sbjct: 208 NCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWG--------- 258
Query: 139 VTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
A S+ + TG +S ALPT ++ TS+A+ +S
Sbjct: 259 -------ANSYGQLGTGNKSNQALPTLINTDKERMVEVAACHTSHTSAAKTQS 304
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 201 LSPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+P LV+ N G ++T+VA G HT+ L+ G+V+ WGY GQ+G GS PTP +
Sbjct: 116 LTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQ-PTPRRV 174
Query: 260 -PCLE 263
CL+
Sbjct: 175 SSCLQ 179
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + + G KI ++ G G H +I + G+V+ WG+ G QLG G+
Sbjct: 57 GDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLGNGT----- 111
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H + P LV S N GK V E+ACG H+ +T
Sbjct: 112 -TNHGLT-----------PALV---STNLLGKR----VTEVACGSHHTIALT 144
>gi|335306961|ref|XP_003360648.1| PREDICTED: alsin [Sus scrofa]
Length = 1737
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 93/223 (41%), Gaps = 47/223 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVTRDFGSA 146
TPE P T +V++AA G H V +TE GEVY++G WR E PS+ + +
Sbjct: 31 TPERLPGWTGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSEPAELCPSSPILENALVG 90
Query: 147 GSFQKDSTGK-QSALPTEQAPPS---DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
+TG S TE + AG+ V ++ NP S + T S
Sbjct: 91 QYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVP----EPNPVSISDSET-S 145
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L V+I ++A G HTL LS ++W WG G QLGL + V P +
Sbjct: 146 PLL-----AVRILQLACGEEHTLALSISREIWAWGTG--CQLGLITTTFPVTKPQKV--- 195
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
EH AGR V ++ACG HS +
Sbjct: 196 EHL--------------------AGR-VVLQVACGAFHSLALV 217
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P V G ++ + AGG H+L L+ QV+ WG GQLG VP
Sbjct: 536 GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVP 595
>gi|444722116|gb|ELW62819.1| RCC1 domain-containing protein 1 [Tupaia chinensis]
Length = 309
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 27/141 (19%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRE----CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
AA GW H V V+ G++Y WGW E +P+ + D+ +++TG +E+
Sbjct: 149 AAGGW-HSVCVSATGDIYIWGWNESGQLALPARSLMEDWNMVA---EEATGL-----SEE 199
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
A AG+E + P + F P LV L G + + + G RHT
Sbjct: 200 ASTLKTVAGDEA-----------GAPTPFIAIQPF---PALVDLPLGSEAVQASCGSRHT 245
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 246 AVVTRTGELYTWGWGKYGQLG 266
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM----VPTP 256
L P L+ GV + +VAAGG H++ +S G ++ WG+ GQL L +R M +
Sbjct: 132 LEPRLLEALQGVPMAEVAAGGWHSVCVSATGDIYIWGWNESGQLALPARSLMEDWNMVAE 191
Query: 257 HLIPCLEHAAS---------GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
E A++ G P + Q S + +CG RH+AVVT
Sbjct: 192 EATGLSEEASTLKTVAGDEAGAPTPFIAIQPFPALVDLPLGSEAVQASCGSRHTAVVT 249
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+PFP LP + V+A+ G H VT GE+YTWGW
Sbjct: 221 QPFPALVDLPLGSEAVQASCGSRHTAVVTRTGELYTWGW 259
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 17/231 (7%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A GK++TWG + GQ L +G + P + + + + G H +++ G
Sbjct: 155 AVLSDGKVLTWGY-NAYGQ--LGNGSTTDQSSPVEVSALSDIKGVSVGKYHMLALRSGGT 211
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
V+ WG+ + S + +T +Q+A+ A S + ++ T
Sbjct: 212 VWAWGFNGSGQLGLGSG------SNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVW 265
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
A ++ G FT P V + + +VAAG H L L G VW WG+ G GQL
Sbjct: 266 AWGQNNQGQLGIGSFTDRPSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQL 325
Query: 245 GLG---SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG 287
G G SR V P L + AA ++ G V NS+G+ G
Sbjct: 326 GDGTTLSRSSPVQVPGLTGVVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLG 376
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 85/220 (38%), Gaps = 47/220 (21%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL-----PTE----ASVVKAAAGW 113
+L +GK+ WG Y G+ G+ P P PTE S++ AAG
Sbjct: 576 SLVVLSNGKVSAWG--------YNGYGQIGDGCSPVPTFYCSSPTEPTNLFSILGVAAGQ 627
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++ G V+ WG + G G D + P + A R
Sbjct: 628 NHSLALRSDGTVWAWG----------RNNSGQLG----DGSLVDRTRPVQVARL--NRVV 671
Query: 174 EEVVKRRKTSSAREESENPASGDE----------FFTLSPCLVTLNPGVK-ITKVAAGGR 222
V + + R + A GD F + P V PG+ + VAAGGR
Sbjct: 672 SVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQV---PGLSGVVAVAAGGR 728
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
H+L L G VW WGY GQ+G GS ++ P + L
Sbjct: 729 HSLALRADGTVWAWGYNSNGQIGDGSDASIIYRPSPVKVL 768
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 102/276 (36%), Gaps = 46/276 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F L GKL WG + GQ S + TP + V AAG H ++
Sbjct: 468 GAKFTLFQKNDGKLWAWGH-NFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLA 526
Query: 119 VTEAGEVYTWGWRECVPSAKVTRD-FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE-- 175
+ G++++WG + V+RD GS S AL + + AGE
Sbjct: 527 LGSDGKLWSWG-SNSLSQLGVSRDTLGSRAS---------PALVSGVSGVVAVAAGETHS 576
Query: 176 -VVKRRKTSSAREESENPASGD------EFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
VV SA + GD F+ SP T I VAAG H+L L
Sbjct: 577 LVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPT--NLFSILGVAAGQNHSLALR 634
Query: 229 DMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV----- 280
G VW WG GQLG GS R + V L + A L G+V
Sbjct: 635 SDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRVVSVVAGLYHSLALRSDGTVWAWGD 694
Query: 281 NSSGKAGR---------------SYVKEIACGGRHS 301
N SG+ G S V +A GGRHS
Sbjct: 695 NGSGQLGDGTYFGQMLPVQVPGLSGVVAVAAGGRHS 730
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 114/289 (39%), Gaps = 41/289 (14%)
Query: 22 VYMWGY-LPGTSPEKSPI--LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSA 78
++ WG+ G + S + L+P+ K+V GG +LA GKL +WGS
Sbjct: 481 LWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGF-HSLALGSDGKLWSWGS- 538
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ Q ++ G P + + VV AAG H + V G+V WG+
Sbjct: 539 NSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYN------- 591
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-----------RE 187
+G G + PTE P++ + V + S A R
Sbjct: 592 ---GYGQIGDGCSPVPTFYCSSPTE---PTNLFSILGVAAGQNHSLALRSDGTVWAWGRN 645
Query: 188 ESENPASGDEFFTLSPCLVT-LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
S G P V LN ++ V AG H+L L G VW WG G GQLG
Sbjct: 646 NSGQLGDGSLVDRTRPVQVARLN---RVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGD 702
Query: 247 GSRI-KMVP--TPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG 287
G+ +M+P P L + AA G+ L G+V NS+G+ G
Sbjct: 703 GTYFGQMLPVQVPGLSGVVAVAAGGRHSLALRADGTVWAWGYNSNGQIG 751
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRIK-- 251
G + L+ V + G+ + +VAAGG H L +LSD +W WG G+GQLG+GS
Sbjct: 72 GTTAYRLASAPVDFSNGMVVKRVAAGGSHALAVLSDK-TLWAWGRNGDGQLGVGSTTSSF 130
Query: 252 ---MVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
VP + + AAS + ++ G V
Sbjct: 131 SPVKVPGRTGVEVVAMAASTFNSAAVLSDGKV 162
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVK-AAAG 112
G G LA + G++ +WG D Y G + + +P P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +V+E GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVSEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4138 EEVIQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4195
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4196 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4238
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4239 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4295
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P LI L+
Sbjct: 4296 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLITVLQ 4345
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4024 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4082
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4083 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4124
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEV+ + S + S S + FT
Sbjct: 4125 RQRRPRQIEALQ--------GEEVI---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4173
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4174 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4227
>gi|310644744|ref|YP_003949503.1| copper amine oxidase domain-containing protein [Paenibacillus
polymyxa SC2]
gi|309249695|gb|ADO59262.1| Copper amine oxidase domain protein [Paenibacillus polymyxa SC2]
Length = 394
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 129/323 (39%), Gaps = 54/323 (16%)
Query: 18 KETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
K+ ++ WG+ GT ++ P+ + D+ K+V GG F LA G +
Sbjct: 99 KDGTIWSWGFASYGELGTGNKRDTAKVPVKNKYI--DNVKEVRAGGQ-FTLALKNDGTVW 155
Query: 74 TWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+G ++ GQ + T G + +P + +V AG + ++ + +++ WG
Sbjct: 156 AYGE-NNFGQLGIGTKGVSAFSVKPVQVQGLEDIVAIDAGDSFGAALDKNNQLWVWG--- 211
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR---AGEEVVKRRKTS-----S 184
G G+ +D K++ L Q D + AG + + S S
Sbjct: 212 ----------RGYDGALGQDD--KENQLTPVQYRIDDIKTFTAGADRIYVLTNSGEVYAS 259
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
S G F SP L+ ++ + ++ AG T L + G +WGWG EGQ+
Sbjct: 260 GSNTSGKLGDGTSTFRRSPVLINISD---VNRLKAGKTQTFALKNDGTLWGWGTNNEGQV 316
Query: 245 GLGSRIKMVPTPH---------LIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSY 290
G G+ + V P L + +A+G L G+V N +G+ G
Sbjct: 317 GDGTDVFSVKVPSQVVDDTNTPLTDVVAFSAAGTHSHALTADGTVWSWGFNRNGELGIGN 376
Query: 291 VKEIACGGRHSAVVTDMSYPIAR 313
K+ +++A T+ P ++
Sbjct: 377 TKQ-----QNAATKTNFPNPFSK 394
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 51/200 (25%)
Query: 70 GKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVY 126
G+L WG + GQ L G+ TP+ +V+ +AG AH ++++ G VY
Sbjct: 913 GELFAWGQ-NSHGQ--LGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVY 969
Query: 127 TWGWRECVPSAKVTRDFGSAG---SFQKDST-----------------GKQSALPTEQAP 166
+WG DFG G + KDS G +AL T+
Sbjct: 970 SWG----------KNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGL 1019
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL- 225
AG+ + SS R+E L PCLVT G ++T++A G HTL
Sbjct: 1020 VFTFGAGK--YGQLGHSSTRDE------------LRPCLVTELLGNRVTQIACGRWHTLA 1065
Query: 226 ILSDMGQVWGWGYGGEGQLG 245
+S++G+V+ +G G GQLG
Sbjct: 1066 YVSELGKVFAFGSGKNGQLG 1085
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 31/137 (22%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P + G+KI +V+ G H+L LS+ GQV+ WG GQLGLG + +P
Sbjct: 138 SFTPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRV 197
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRSYVKE--------------- 293
IP + AA G L G+ NS+G+ S K
Sbjct: 198 RSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKT 257
Query: 294 -----IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 258 LGVVYISCGSEHTAVLT 274
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 25/104 (24%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P +V GV + +++AG H++ LS G V+ WG GQLGLG
Sbjct: 937 TPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFGQLGLG-------------- 982
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+R +++S V +ACGG H+A++T
Sbjct: 983 --HTES-KDSPSLLR--ALDSQK------VDFLACGGSHTALLT 1015
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 82/218 (37%), Gaps = 52/218 (23%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E TP+ +++ +
Sbjct: 100 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKERSFTPQKIKALAGIKIIQVS 156
Query: 111 AGWAHCVSVTEAGEVYTWGWR-----------------------ECVPSAKVTRDFGSAG 147
G+ H ++++E G+V++WG E +P A+V G A
Sbjct: 157 CGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAA--GGAH 214
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
SF +G + A + V+R K P S TL
Sbjct: 215 SFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYK----------PLSVGALKTLG----- 259
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ ++ G HT +L+ G V+ +G GQLG
Sbjct: 260 ------VVYISCGSEHTAVLTQNGAVYTFGANSSGQLG 291
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+++ V+ G H+L + G+V+ WG G EGQLG+G + TP I L
Sbjct: 97 LRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKAL 147
>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1271
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 27/277 (9%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS------ADDEGQS 84
T+ ++P+ + PA ++ + G +LA G L WG+ D ++
Sbjct: 241 TTLRQTPVKTNKPANASDQFTFTTIAAGDHS-SLAIGSDGNLYAWGNNTRGQLGDGTTEN 299
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
LT K P+P + E + + +A W H +++ +Y WGW + G
Sbjct: 300 KLTPVK---VPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTG 356
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA----------S 194
S D+ S+ P + P+ + R + + + + A
Sbjct: 357 S------DNPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGD 410
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G + +P V GV ++ +AG +S G ++ WG+ G G+LG GS +
Sbjct: 411 GTDIQRFTPVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDRR 470
Query: 255 TPHLIPCLEHAASGKD-RPLLVRQGSVNSSGKAGRSY 290
TP LI + A++G ++VR V + G G Y
Sbjct: 471 TPTLISPPDGASAGFTWARVMVRDDHVLAIGSDGNLY 507
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 117/297 (39%), Gaps = 63/297 (21%)
Query: 10 ENEKMEECKETVVYMWG------YLPGTSPEK-SPILSPIPARLCGGDSWKDVCGGGCGF 62
++ + + VY WG GT+ ++ +P+ P P G + + V G GF
Sbjct: 770 DDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKP---TGVNRFTQVSAG-TGF 825
Query: 63 ALATSESGKLITWGSADDEGQ----SYLTSGKHGETPEPFPL-------PTEASVVKAAA 111
+LA G + WG + GQ + T+G + P + T ++ +A
Sbjct: 826 SLALDGQGHVWAWG-LNSSGQLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISA 884
Query: 112 GWAHCVSVTEAGEVYTWGWREC----VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
G H ++V G + WG E VP++ V +T + P + A P
Sbjct: 885 GITHVLAVDGQGRAWGWGSNEFGKLGVPASTV-------------ATTGITTRPVQVATP 931
Query: 168 SDKRAG---EEVVKRRKTSSARE---------ESENPASGD------EFFTLSPCLVT-- 207
+ G +V S A + ++N A G+ +T +P
Sbjct: 932 QGETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPG 991
Query: 208 LNP--GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPC 261
NP G ++ AG H+L L D+G++W WG G+LGLG + + P+ +P
Sbjct: 992 TNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPA 1048
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 189 SENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
++ P SG TL P G++ ++V+AG H+L L G V+ WG GQLG G+
Sbjct: 741 NQGPDSGQTKVTLVPPAAR---GIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGT 797
Query: 249 RIK-----MVPTPHLIPCLEHAASGKDRPL-LVRQGSV-----NSSGKAGRSYV 291
+P P + ++G L L QG V NSSG+ G + +
Sbjct: 798 ATDRLTPVQIPKPTGVNRFTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAI 851
>gi|321452330|gb|EFX63739.1| hypothetical protein DAPPUDRAFT_267802 [Daphnia pulex]
Length = 727
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 20/113 (17%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGK 269
IT+VA G +HTL ++ G+++ WG GQLGL M+PTP ++ L + K
Sbjct: 37 NITQVACGAQHTLAQNEWGEIFAWGSNSNGQLGLNVEESMIPTPKMVKSLATKQMIVKSK 96
Query: 270 DRPLLVRQGSVNSSGKAGR-----------------SYVKEIACGGRHSAVVT 305
+R G NS G+ G V I CG H+A +T
Sbjct: 97 LFRSCLRLGPKNSFGQLGLGDTVDRPQPTQLKSLRFQRVTYIRCGMDHTAALT 149
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 211 GVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI--PCLEHAAS 267
G +T++ G HTL + +++ +G GG GQLG S V +PHL+ P S
Sbjct: 184 GTTVTQICCGRCHTLAFVPSKDRIYAFGLGGSGQLGTKSTAN-VNSPHLVIGPWETSNNS 242
Query: 268 GKD-RPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
KD + L S+ ++ R V+ I CGG S
Sbjct: 243 IKDVKDLATETADALSAIQSKRVVVRNIFCGGDQS 277
>gi|405373375|ref|ZP_11028148.1| hypothetical protein A176_4709 [Chondromyces apiculatus DSM 436]
gi|397087634|gb|EJJ18664.1| hypothetical protein A176_4709 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 966
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 102/279 (36%), Gaps = 66/279 (23%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPE--PFPLPTEASVVKAAAGWA 114
G ++A G++ WG D GQ L G TPE P P+ + AAG
Sbjct: 57 AAGAYHSVALRSDGEVWAWGRNSD-GQ--LGRGAVSATPEASPHPVALPGPMTAVAAGAG 113
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++ G V+ WG + G AGS TG P + P+
Sbjct: 114 HSLAIDALGHVWAWG----------RNNRGQAGS---ALTGGPVLTPVQVTLPA---PAV 157
Query: 175 EVVKRRKTSSAREESEN-------------PASGDEFFTLSPCLVTLNPGV--------- 212
+ R S A + + + + D +P V L
Sbjct: 158 SIAARADYSLAVDANGDVWAWGQNIDGELGQHAADTLAHHTPVKVQLPQATAQGNCTPVD 217
Query: 213 -----KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL----- 262
+I +AAGG H L L+ G VW WG Q+G G+ TP L+P L
Sbjct: 218 PLDLYRIADIAAGGHHVLALTRTGCVWAWGRNDAAQIGTGTE---SSTPVLVPTLVRNIP 274
Query: 263 --EHAASGKDRPLL--------VRQGSVNSSGKAGRSYV 291
+ A+G+ LL V +N+SG+ GR Y+
Sbjct: 275 RAKAVAAGESHSLLYDDEMNRIVWTWGLNTSGQVGRDYI 313
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+++T+VAAG H++ L G+VW WG +GQLG G+
Sbjct: 51 LEVTRVAAGAYHSVALRSDGEVWAWGRNSDGQLGRGA 87
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 98/257 (38%), Gaps = 40/257 (15%)
Query: 10 ENEKMEECKETVVYMWGYLP------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA 63
E+ + + V+ WG GT+ + +P+ + DS V G +
Sbjct: 129 ESHSLALTDDGRVFAWGLNSSGQLGDGTTADSR---TPVQVQGLATDSTIKVVAAGGNHS 185
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE---ASVVKAAAGWAHCVSVT 120
LA + G++ WG + GQ G + P+ + A+V AAG H +++T
Sbjct: 186 LALTSDGRVFAWGK-NSSGQL----GNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLALT 240
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA--PPSDKRAGEEVVK 178
G +Y WG S+G D T S+ P A P K K
Sbjct: 241 SDGRIYAWG-------------LNSSGQL-GDGTTSNSSTPVLVAGLPAGSKPVAVSAGK 286
Query: 179 RRKTSSAREESENPASGDEF-------FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ ++ + G+ + T S V + +T V+AGG +L L+ G
Sbjct: 287 DHSLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQVTGLANVTAVSAGGSDSLALTSDG 346
Query: 232 QVWGWGYGGEGQLGLGS 248
V+ WG GQLG G+
Sbjct: 347 YVYAWGLNSSGQLGDGT 363
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 110/285 (38%), Gaps = 93/285 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVKAAAGWAH 115
G +LA ++ G++ WG + GQ L G ++ P L T++++ AAG H
Sbjct: 128 GESHSLALTDDGRVFAWG-LNSSGQ--LGDGTTADSRTPVQVQGLATDSTIKVVAAGGNH 184
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE-QAPPSDKRAGE 174
+++T G V+ WG S+G +ST S++P + Q P++
Sbjct: 185 SLALTSDGRVFAWGKN-------------SSGQLGNNST-VDSSIPVQVQGLPAN----- 225
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+T VAAGG H+L L+ G+++
Sbjct: 226 ---------------------------------------VTAVAAGGNHSLALTSDGRIY 246
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLE------HAASGKDRPL-LVRQGSV-----NS 282
WG GQLG G+ TP L+ L ++GKD L L++ G+V NS
Sbjct: 247 AWGLNSSGQLGDGTTSNS-STPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNS 305
Query: 283 SGKAGR---------------SYVKEIACGGRHSAVVTDMSYPIA 312
G+ G + V ++ GG S +T Y A
Sbjct: 306 YGQLGNGTTTASEMPVQVTGLANVTAVSAGGSDSLALTSDGYVYA 350
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 26/115 (22%)
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP-HLIPCLEHAASGKDRPL- 273
V+AGG H+L+L+ VW WG GQLG G+ + PTP +P + ++G+ L
Sbjct: 75 VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPSVAQVSAGESHSLA 134
Query: 274 LVRQGSV-----NSSGKAGR------------------SYVKEIACGGRHSAVVT 305
L G V NSSG+ G S +K +A GG HS +T
Sbjct: 135 LTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALT 189
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 92/247 (37%), Gaps = 85/247 (34%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+LA G++ WG A EGQ + K TP+ T +++ + G H ++++E
Sbjct: 85 SLAVCHKGRVFAWG-AGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSE 143
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRAGEEVVK 178
G+VY+WG K+S G Q L E QA P R+ E
Sbjct: 144 DGQVYSWG---------------------KNSQG-QLGLGKEFPSQASPQRVRSLE---- 177
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
G+ + +VAAGG H+ LS G +GWG
Sbjct: 178 --------------------------------GIPLAQVAAGGAHSFALSLSGTSFGWGS 205
Query: 239 GGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
GQL L SG + P V++ +S G V I+CG
Sbjct: 206 NNTGQLAL--------------------SGNNTP--VQRYKPHSIGALKSLDVIYISCGY 243
Query: 299 RHSAVVT 305
H+AV+T
Sbjct: 244 EHTAVLT 250
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GG +A G + WG+ ++ GQ L G + P + V+ A G+AH
Sbjct: 199 AGGAYHTIALKSDGTVWAWGN-NEGGQ--LGDGSTTDRSTPVQVSGLTDVIAIAGGYAHT 255
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD------K 170
+++ G V+ WG E G D + ++P + SD
Sbjct: 256 IALKSDGTVWAWGDNE--------------GGRLGDGSTTNRSIPVKVGGLSDVIAIAGG 301
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
A +K T A ++E GD T V ++ + +A G HT++L
Sbjct: 302 NAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVLRSD 361
Query: 231 GQVWGWGYGGEGQLGLGS 248
G VW WG+ GQLG GS
Sbjct: 362 GTVWTWGHNEGGQLGDGS 379
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 82/213 (38%), Gaps = 24/213 (11%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
IP ++ GG S GG +A G + WG D+EG L G P +
Sbjct: 285 IPVKV-GGLSDVIAIAGGNAHTIALKSDGTVWAWG--DNEG-GQLGDGSTTNRSTPVKVS 340
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
A V+ A G++H + + G V+TWG E G ST +S P
Sbjct: 341 GLADVIAIAGGYSHTIVLRSDGTVWTWGHNE-------------GGQLGDGSTTNRST-P 386
Query: 162 TEQAPPSDKRA------GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+ + +D A VK T A + GD S V +N +
Sbjct: 387 VQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTDVI 446
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+A G HT+ + G VW WG+ GQLG GS
Sbjct: 447 AIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGS 479
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 48/194 (24%), Positives = 75/194 (38%), Gaps = 11/194 (5%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GG +A G + WG D+EG L G P + + V+ A G AH
Sbjct: 249 AGGYAHTIALKSDGTVWAWG--DNEG-GRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHT 305
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G V+ WG E G + + + K S L + + + V
Sbjct: 306 IALKSDGTVWAWGDNE-------GGQLGDGSTTNRSTPVKVSGL-ADVIAIAGGYSHTIV 357
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ T +E GD T V ++ + +A G HT+ + G +W W
Sbjct: 358 LRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLADVIAIAGGVYHTIAVKSDGTMWAW 417
Query: 237 GYGGEGQLGLGSRI 250
GY GQLG G+ I
Sbjct: 418 GYNWYGQLGDGTTI 431
Score = 45.4 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 23/200 (11%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GG +A + WGS + GQ L G P P+ +++ A G+ H
Sbjct: 1095 AGGDYHTIALKSDNTVWAWGS-NSYGQ--LGDGTITNRSIPTPVTYLTNIIAIAGGYVHT 1151
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD--KRAGE 174
+++ G V+ WG+ +G G D + + P + + +D AGE
Sbjct: 1152 IALKSDGTVWAWGYN----------GYGQLG----DGSTTNRSTPVQVSGLTDVIAIAGE 1197
Query: 175 EV----VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
V +K T A + GD T V ++ + +A G HT+ L
Sbjct: 1198 YVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSD 1257
Query: 231 GQVWGWGYGGEGQLGLGSRI 250
G VW WG+ GQLG G+ I
Sbjct: 1258 GTVWTWGWNNSGQLGDGTTI 1277
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 68/195 (34%), Gaps = 23/195 (11%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GG ++A G + WG G L G + P + ++ A G+ H
Sbjct: 747 AGGYVHSIALKSDGTVWAWGY---NGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHT 803
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE- 175
+++ G V+ WG E G D T S+ P + + +D A
Sbjct: 804 IALKSDGTVWAWGHNE--------------GGQLGDGTTTNSSTPVQVSGLTDVIAVTAR 849
Query: 176 -----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+K T + GD T V + + +A G HT+ L
Sbjct: 850 LYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTDVIAIAGGYYHTIALKSD 909
Query: 231 GQVWGWGYGGEGQLG 245
G VW WGY G QLG
Sbjct: 910 GAVWAWGYNGNNQLG 924
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 76/198 (38%), Gaps = 23/198 (11%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GG +A G + TWG + GQ L G P + A ++ A G+ H
Sbjct: 697 AGGDYHTIALKSDGTVWTWG-FNYYGQ--LGGGATTNRSTPVQVKGLADIIAIAGGYVHS 753
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD--KRAGE 174
+++ G V+ WG+ +G G D + P + + +D AG
Sbjct: 754 IALKSDGTVWAWGYN----------GYGQLG----DGSTTDHLTPVQVSGLTDIIAIAGG 799
Query: 175 EV----VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ +K T A +E GD T S V ++ + V A HT+ L
Sbjct: 800 YIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTDVIAVTARLYHTIALKSD 859
Query: 231 GQVWGWGYGGEGQLGLGS 248
G VW WG GQLG GS
Sbjct: 860 GTVWTWGRNIYGQLGDGS 877
Score = 40.8 bits (94), Expect = 0.78, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 64/177 (36%), Gaps = 13/177 (7%)
Query: 84 SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
S L G ++ P + + A G H +++ G V+TWGW +
Sbjct: 621 SQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNN-------SGQL 673
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
G + + ST Q T+ + +K T + G T
Sbjct: 674 GDGTTINR-STPVQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS 732
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
V + I +A G H++ L G VW WGY G GQLG GS T HL P
Sbjct: 733 TPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGS-----TTDHLTP 784
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 32/130 (24%)
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IP 260
TLN +KI +V+ G H+L LS+ GQV+ WG +GQLGLG + +P IP
Sbjct: 124 TLN-DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIP 182
Query: 261 CLEHAASGKDRPLLVRQGSV-----NSSGK--------AGRSY------------VKEIA 295
+ AA G L G+ N++G+ +G+SY V I+
Sbjct: 183 LAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYIS 242
Query: 296 CGGRHSAVVT 305
CG H+ V+T
Sbjct: 243 CGYEHTVVLT 252
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 72/196 (36%), Gaps = 61/196 (31%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L +G+ ET P + + + +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGTGEFKETNLIPMKIKTLNDIKIKQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H ++++E G+V++WG S G P+ QA P
Sbjct: 135 CGHYHSLALSEGGQVFSWG------------------SNSDGQLGLGKKFPS-QASPQRV 175
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+ + G+ + +VAAGG H+ LS
Sbjct: 176 RSLD------------------------------------GIPLAQVAAGGAHSFALSLS 199
Query: 231 GQVWGWGYGGEGQLGL 246
G +GWG GQL L
Sbjct: 200 GTSFGWGRNNAGQLAL 215
Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 40/130 (30%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--------SRIKMVPTPH--LIP 260
GV++ + A+G RH+L+L GQV G G GQLG RI+ + T H L+
Sbjct: 22 GVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVS 81
Query: 261 CLEHAASGKDRPLLV-RQGSV-----NSSGKAGRS------------------YVKEIAC 296
C GK+ L V +G V S G+ G +K+++C
Sbjct: 82 C------GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSC 135
Query: 297 GGRHSAVVTD 306
G HS +++
Sbjct: 136 GHYHSLALSE 145
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 24/92 (26%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ ++A G +HTL L++ G+++ WG +GQLGLG +K+ P LI L
Sbjct: 166 VVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIP------- 218
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ IACGG HS VV+
Sbjct: 219 -----------------IAFIACGGYHSIVVS 233
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 24/91 (26%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+ A G H++ +++ GQ++ WG +GQLGLG+ + + TP ++ L
Sbjct: 115 QAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKAL------------- 161
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G S V +IACG +H+ +T+
Sbjct: 162 -----------GTSIVVQIACGKKHTLALTN 181
Score = 45.4 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 87/243 (35%), Gaps = 73/243 (30%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
+AA G +H V+V G+++ WG S G + L P
Sbjct: 115 QAACGASHSVAVNNWGQLFCWG------------------SNADGQLGLGTPLTIAHTPR 156
Query: 168 SDKRAGEEVV-----KRRKTSSAREESENPASG-----------DEFFTLSPCLVTLNPG 211
K G +V ++ T + E A G D P L+T
Sbjct: 157 MVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLAT 216
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL--------- 262
+ I +A GG H++++S G V+GWG GQLG+ + +PCL
Sbjct: 217 IPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMND-----ISDKYVPCLLKTLRNAKV 271
Query: 263 EHAASGKD-RPLLVRQGSVNSSGKAGR-----------------------SYVKEIACGG 298
++ A G++ L G V + G AG S V +I+CG
Sbjct: 272 KYVACGEEFSVFLTMDGGVFTCG-AGMYGQLGHGANSNEILPRQIIELMGSVVTQISCGK 330
Query: 299 RHS 301
RH+
Sbjct: 331 RHT 333
>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
Length = 1440
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 48/210 (22%)
Query: 52 WKD-VCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV 107
WK V CGF L TSE K+ + G + GQ + + P P + +V+
Sbjct: 72 WKRRVVSVSCGFNHTLLLTSEY-KIFSMG-FNQVGQLGIENVVDSAVPLPVDTLQKCNVI 129
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
K AG ++T+ G++Y WG T FG G+ + + Q +PT P
Sbjct: 130 KIKAGNNISAAITDKGDLYIWG----------TSSFGQLGNGKMNPKSNQ-FIPTTILEP 178
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
+ +E +NP + ++ + V G +HT+ +
Sbjct: 179 F---------------ISEQEKDNP---------------IYQNIQYSNVCFGAQHTIAV 208
Query: 228 SDMGQVWGWGYGGEGQLGLG-SRIKMVPTP 256
S G ++ WG GQLGLG K+VP P
Sbjct: 209 STTGTIFSWGSNQYGQLGLGHCNTKLVPVP 238
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 75 WGSADDE-GQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
W ++ GQ + K + P P VV + G H +++ + G +Y+WG
Sbjct: 59 WSCGNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWG---- 114
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA 193
GS G Q ++P A S + + + + ++ + +
Sbjct: 115 ---------SGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFS 165
Query: 194 SGDEFF-----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
GD SP V G+ + +VAAGG H+ LS G +GWG EG
Sbjct: 166 WGDNDHGQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRNKEG 225
Query: 243 QLGLGSR 249
QL L +
Sbjct: 226 QLALSGK 232
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HA 265
G +I + A G RH+L+L G VW G GQLG IK P I LE
Sbjct: 36 GQQIVQAACGERHSLLLLADGTVWSCGNNSYGQLGR-KNIKKSKRPAPIQALETQVVVSV 94
Query: 266 ASGKDRPLLV-RQGSVNS--SGKAGRSYVKEI 294
+ GK+ L + + G + S SG G+ +KE+
Sbjct: 95 SCGKEHSLAICKTGRIYSWGSGSRGQLGIKEV 126
>gi|332819953|ref|XP_517337.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Pan
troglodytes]
Length = 976
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 35/227 (15%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
GS G +T A+P ++ ++ + + S A+ E
Sbjct: 110 ----AGSDGQLGLMTTEDSVAVPR-----LIQKLNQQTI--LQVSCGNWHCLALAADRE- 157
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
SPC V L K+ ++ G HT +L+ G V+ +G G GQLG
Sbjct: 158 ---SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 201
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 48/108 (44%), Gaps = 25/108 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP------------- 260
I VA G H+L LSD GQ++ WG G +GQLGL + V P LI
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 261 ---CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
CL AA ++ P V+ V I+CG H+AV+T
Sbjct: 146 NWHCLALAAD-RESPCHVKLLRTQK--------VVYISCGEEHTAVLT 184
>gi|326533910|dbj|BAJ93728.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 80/242 (33%), Gaps = 76/242 (31%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + SG + TWG + + P P E +V A AH ++TE+GE
Sbjct: 156 ALTASGDVFTWGYGGFGALGHYVYHRE-LLPRKVNCPWEGKIVHIATSGAHTAAITESGE 214
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YTWG E + G + K SALP
Sbjct: 215 LYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVSALP----------------------- 251
Query: 185 AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
V + VA GG TL L+ GQ+W WG +L
Sbjct: 252 ---------------------------VPVAAVACGGFFTLALTSDGQLWSWGANSNFEL 284
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G GS P ++P L++ +V ++ACGG HS +
Sbjct: 285 GRGSNSSDW-RPQIVPSLKNV------------------------HVIQVACGGYHSLAL 319
Query: 305 TD 306
TD
Sbjct: 320 TD 321
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 25 WGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEG 82
+G L ++ +L P + +DV GCG + + G + T G +D G
Sbjct: 9 YGQLGLGGIDEEIVLEPRKSDFFVNKKVRDV---GCGLRHTVFVLDDGTVYTCG-CNDLG 64
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q L K + PE ++V + G AH +++ + G+VY WG
Sbjct: 65 Q--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG------------- 109
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF--- 199
S G + + +P SD + + + + + SE G +
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 200 --------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
SP L+ G+ +VAAGG H+ +L+ G ++GWG GQLGL
Sbjct: 170 GLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSVNSSGK 285
A G +L G++ G+
Sbjct: 197 AGGAHSFVLTLSGAIFGWGR 216
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
I V+ G HTL L+D GQV+ WG +GQLGL + + P I L
Sbjct: 85 NIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL 134
>gi|18416604|ref|NP_568250.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|16604485|gb|AAL24248.1| AT5g11580/F15N18_170 [Arabidopsis thaliana]
gi|18958034|gb|AAL79590.1| AT5g11580/F15N18_170 [Arabidopsis thaliana]
gi|332004314|gb|AED91697.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 553
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 71/183 (38%), Gaps = 64/183 (34%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
++ AAG AH +++T G VY+WG G F + TGK+S
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWG----------------RGMFGRLGTGKES------- 54
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+E+V E N A GD ++I VAAG H+L
Sbjct: 55 --------DELVP------VLVEFPNQAEGDR--------------IRIVGVAAGAYHSL 86
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+SD G VW WGY GQLG L PCL + L R+ S +S
Sbjct: 87 AVSDDGSVWCWGYNIYGQLGFDGE------NSLAPCLI-------KNLFERETSSSSLND 133
Query: 286 AGR 288
+GR
Sbjct: 134 SGR 136
>gi|348688712|gb|EGZ28526.1| hypothetical protein PHYSODRAFT_260366 [Phytophthora sojae]
Length = 409
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG----WRECVPSAKVTRDFGSAGSF 149
TP P P T V + + GWAH VT G+ Y +G +R+ + S + R +
Sbjct: 54 TPTPLPSTTGLPVKEISVGWAHAGFVTNDGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWW 113
Query: 150 QKDST---GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGD 196
+ T G + +P P ++ + V T E + G+
Sbjct: 114 MNNFTRARGVDTLVPALLELPEGEKVKKIVCSTALTFLLTESGKLFTLGANGYGQCGVGE 173
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
E ++ P G +I +AAG +H L ++ G V+ WG G GQLG G+
Sbjct: 174 ESVSVQPPTHVDIDGDEIVDIAAGYQHGLAVTKNGTVFTWGKGERGQLGFGT 225
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 7/193 (3%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
GD D+ G LA +++G + TWG + GQ +G + + P+ +
Sbjct: 188 GDEIVDIAAG-YQHGLAVTKNGTVFTWGKGE-RGQLGFGTG-NADAPQELIALKGKKIAH 244
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AG+ H +V+E GE+Y WG + P K+ + ++ Q +
Sbjct: 245 VGAGFNHSCAVSEDGELYLWG-KLLNPKGKMESNGDQITPRLVRTSDAVKLFKCSQFHTT 303
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK---ITKVAAGGRHTL 225
A +E+ +T S R+E + A +P +T + V+ I K+ G +
Sbjct: 304 FITADDEIWLAGRTPSGRQEKNDFAHVGSQMHTAPLQITNDQVVRAKDIVKIGKGVDKSS 363
Query: 226 ILSDMGQVWGWGY 238
++ G+ + W +
Sbjct: 364 FVTADGRAYEWNF 376
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 104/277 (37%), Gaps = 52/277 (18%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILS---PIPARLCGGDSWKDVCGGGCGFALATS 67
N + + +Y WGY + IL+ P+ G ++ V G +LA
Sbjct: 59 NHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAG-ADHSLAVG 117
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPF-----PLPTEASVVKAAAGWAHCVSVTEA 122
G WG D L +G + P +P+ ++ + AG H ++V
Sbjct: 118 SDGNAYAWGRNTD---GRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSN 174
Query: 123 GEVYTWGWR------------ECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPS- 168
G++Y+WG+ VP KV+ AG +F + S G + +L +
Sbjct: 175 GDIYSWGYNRSGQLGDGTTLASSVP-LKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTY 233
Query: 169 ---DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ R G+ + S PA P LV+ GV T+V+AG H+L
Sbjct: 234 AWGEARGGQLGIG--------SISRTPA---------PALVSAPAGVSFTQVSAGDLHSL 276
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ G+ + WG GQLG T L P L
Sbjct: 277 AVGSDGKAYAWGNNDSGQLG-----NATTTSSLAPVL 308
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 101/252 (40%), Gaps = 37/252 (14%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGD-----SWKDVCGGGCGFALATSESGKLITW 75
+Y WGY G + + + S +P ++ G ++ V G +LA +GK W
Sbjct: 177 IYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDR-HSLAIGSNGKTYAW 235
Query: 76 GSADDEGQSYLTSGKHGETPEP--FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
G A GQ L G TP P P S + +AG H ++V G+ Y WG
Sbjct: 236 GEARG-GQ--LGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWG---- 288
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP-----PSDKRAGEE---VVKRRKTSSA 185
D G G ++T S P +P + AG + + + A
Sbjct: 289 ------NNDSGQLG----NATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYA 338
Query: 186 REESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ N G+ T S P +VT GV T++ AGG H+L + + WG GQ
Sbjct: 339 WGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQ 398
Query: 244 LGLG-SRIKMVP 254
LG G S +VP
Sbjct: 399 LGNGTSDGSLVP 410
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-----MVPTPHLIPCLEH 264
PGV T+V+AG H+L + G ++ WGY GQLG S + +V TP +
Sbjct: 47 PGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGV-TFTQ 105
Query: 265 AASGKDRPLLV 275
++G D L V
Sbjct: 106 VSAGADHSLAV 116
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 82/215 (38%), Gaps = 59/215 (27%)
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWREC------------VPSAKVTRDFGSAGSFQKDSTG 155
+ +AG H +++ G +Y WG+ VP T D +F + S G
Sbjct: 53 QVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPD---GVTFTQVSAG 109
Query: 156 KQSALPTEQAPPSDKRA---GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP-- 210
+L A SD A G R ++ S P LV+
Sbjct: 110 ADHSL----AVGSDGNAYAWGRNTDGRLGNGTSTGSSV------------PLLVSAGAVP 153
Query: 211 -GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
GV I++V AGG H+L + G ++ WGY GQLG G+ +
Sbjct: 154 SGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLA-----------------S 196
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
PL V G+V AG ++ +++ G RHS +
Sbjct: 197 SVPLKVSAGAV----PAGVTF-SQVSAGDRHSLAI 226
>gi|159036732|ref|YP_001535985.1| cell wall anchor domain-containing protein [Salinispora arenicola
CNS-205]
gi|157915567|gb|ABV96994.1| LPXTG-motif cell wall anchor domain [Salinispora arenicola CNS-205]
Length = 566
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 78/207 (37%), Gaps = 23/207 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GG G +LA + +G ++ WG D GQ + TP LPT V AAG H
Sbjct: 94 IAGGDGHSLALTSTGSVLAWGDNSD-GQLGDGTTTDTTTPVAVDLPTGTEVTAIAAGNDH 152
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-----LPTEQAPPSDK 170
+++T G V WG S G +T S LPT +
Sbjct: 153 SLALTSTGSVLAWGDN-------------SDGQLGDGTTTDTSTPVTVDLPTTTTATAIS 199
Query: 171 RAGEEVVKRRKTSSAREESENPAS--GDE--FFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ + T A N GDE T +P V L PG + VA G H+L
Sbjct: 200 AGADYSLSLSSTGGAFAWGNNDQGQLGDETTLSTSTPVNVALQPGTTLLAVAGGSGHSLA 259
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMV 253
++ WG +GQLG G+ +
Sbjct: 260 ITSDNAAIAWGDNSQGQLGDGTTTDAL 286
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 82/205 (40%), Gaps = 33/205 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA + +G ++ WG D GQ + TP LPT + +AG + +S
Sbjct: 149 GNDHSLALTSTGSVLAWGDNSD-GQLGDGTTTDTSTPVTVDLPTTTTATAISAGADYSLS 207
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
++ G + WG D G G D T ++ P A + G ++
Sbjct: 208 LSSTGGAFAWG----------NNDQGQLG----DETTLSTSTPVNVA----LQPGTTLLA 249
Query: 179 RRKTS--SAREESENPA------------SGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
S S S+N A G L+P V L PG +IT VAAG H+
Sbjct: 250 VAGGSGHSLAITSDNAAIAWGDNSQGQLGDGTTTDALAPVNVALAPGTEITAVAAGRLHS 309
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSR 249
+ L+ G + WG GQLG G+
Sbjct: 310 VALTSAGTAFTWGNNASGQLGNGTN 334
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF- 98
+P+ L G + V GG G +LA + I WG D Q L G + P
Sbjct: 235 TPVNVALQPGTTLLAVAGG-SGHSLAITSDNAAIAWG---DNSQGQLGDGTTTDALAPVN 290
Query: 99 -PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
L + AAG H V++T AG +TWG
Sbjct: 291 VALAPGTEITAVAAGRLHSVALTSAGTAFTWG 322
>gi|336368615|gb|EGN96958.1| hypothetical protein SERLA73DRAFT_185217 [Serpula lacrymans var.
lacrymans S7.3]
Length = 550
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 45/164 (27%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
PF V+KAAAG V +TE+G+V+T+G +G+
Sbjct: 179 PFHNGARERVIKAAAGITFSVVLTESGKVFTFG------------------------SGE 214
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ L + R GE +V KT+ E + P V KI +
Sbjct: 215 KGQL-------GNGRTGEHIVTGNKTAYDIE-------------VEPIRVRGLDDKKIVQ 254
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
++ G +HT+ L G V+ WGY G +LGLG++ + V P ++P
Sbjct: 255 ISCGQQHTVALDSQGLVYVWGYNGYCRLGLGNQ-QDVLIPKIVP 297
>gi|324502737|gb|ADY41202.1| Serine/threonine-protein kinase Nek9 [Ascaris suum]
Length = 1038
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 69/184 (37%), Gaps = 46/184 (25%)
Query: 167 PSDKRAGEEVVKRRKTSSARE---ESENPASGDEF--------------FTLSPCLVTLN 209
PS + A + V K R R E E P G TLSP + T
Sbjct: 426 PSARNALDMVRKNRNNGMKRRNVTEDEQPNEGISHNFARSAVYKFDVANITLSP-ITTFA 484
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-----PCLEH 264
++I + A RH ++++ V+ WG GQLGLG R K P L+ C+
Sbjct: 485 ANIRIKQAALSERHQVVVTAERTVYAWGDNRHGQLGLGDR-KFRAEPALVESLTSKCVTK 543
Query: 265 AASG-------KDRPLLVRQGSVNSSGKAGRS---------------YVKEIACGGRHSA 302
A G DR + G+ SG GR V +IACG H+
Sbjct: 544 VAVGATFSLFCTDRGTALFCGNGKYSGDGGRDDDVLKPILIDSLLRVDVIDIACGDEHAV 603
Query: 303 VVTD 306
VV D
Sbjct: 604 VVAD 607
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
L P L+ V + +A G H ++++D G+V+ WG G G+LG G+
Sbjct: 579 LKPILIDSLLRVDVIDIACGDEHAVVVADGGKVFVWGSGLNGRLGTGN 626
>gi|223996509|ref|XP_002287928.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977044|gb|EED95371.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2256
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 93/246 (37%), Gaps = 47/246 (19%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
L WGS +SG+ PL T + + A+AG + V + G Y+ G+
Sbjct: 579 DLCVWGSPK-------SSGQDATDNILVPLETGSKAIDASAGTKYSVMIDVNGVAYSSGF 631
Query: 131 RECVPS-------------------AKVTRDFGSAGS-------FQKDSTGKQSALPTEQ 164
E + S +VTR F A F+K G +S+L T
Sbjct: 632 VEDMDSYHGHLGLRPEDMSSGMNEFTEVTRVFDDAQGGVTDPPVFEKVFAGVESSLGTAS 691
Query: 165 APPS--DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
D+R R ++ D+ L P L+ G +I VA GG
Sbjct: 692 IHTIFLDRRG-------RVWATGSNSKGQLCLNDDVDRLIPELIPFE-GRRIVDVAIGGE 743
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS----GKDRPLLVRQG 278
HTL+L + G V+G G GQLGL S P + L+ + S G+D L +
Sbjct: 744 HTLLLDEFGNVYGCGSNEMGQLGLTSSTVATGIPLKLYLLQSSVSSISAGRDHSLFTAED 803
Query: 279 SVNSSG 284
+ SG
Sbjct: 804 GIYVSG 809
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 30/234 (12%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A T ES WG+ D GQ+ PL + +V ++AG + + +
Sbjct: 1408 AAPTQESLNFFFWGAPDSVGQTASIDVLE-------PLFVDTGLVYSSAGSKYSLIILSD 1460
Query: 123 GEVYTWGWRECVPSAKVTRDFGSA-----GSFQKDSTGKQSALPTE-QAPPSDK-RAGEE 175
G + G+ E + + G F+ S + + TE +AP DK AG E
Sbjct: 1461 GSALSAGFIESINDYQGHLGMGDTVTEGINEFKLISVKDEGSDQTEIEAPRFDKVFAGVE 1520
Query: 176 -------VVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
+ + + N A GDE ++P + ++ V+I VA GG HT
Sbjct: 1521 STAGVIHTILLDQNGNVYATGSNSAGQLCLGDEEDRMAPVKIPVD--VRIVDVAIGGEHT 1578
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS---GKDRPLLV 275
L+L + G V G GQLGLG + TP ++ ++ S G + L V
Sbjct: 1579 LLLDEDGNVHSCGSNAVGQLGLGDGTQQTNTPVMVDGVQSVTSISAGAEHSLFV 1632
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 94/231 (40%), Gaps = 30/231 (12%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
T ES L WGS++ + G+ + PL V ++AG + V V + G V
Sbjct: 998 TGESLTLFFWGSSE-------SVGEESDEDVAQPLNVGGDTVHSSAGSRYTVIVLKDGSV 1050
Query: 126 YTWGWRECVPSAK----VTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDK-------RA 172
+ G E + + + +D G FQ S+ S P +K A
Sbjct: 1051 LSAGLVESINDYQGHLGIDQDAVVEGMNKFQPVSSFYDSGGELMDTPRFNKVFAGVESTA 1110
Query: 173 GE-EVVKRRKTSSAREESENPAS----GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
G+ + + + N A GDE ++P + ++ V+I VA GG HTL+L
Sbjct: 1111 GDIHTILLDQNGNVYATGSNSAGQLCLGDEEDRMAPVKIPVD--VRIVDVAIGGEHTLLL 1168
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS---GKDRPLLV 275
+ G V G GQLGLG + TP ++ ++ S G + L V
Sbjct: 1169 DEDGNVHSCGSNAVGQLGLGDGTQQTNTPVMVDGVQSVTSISAGAEHSLFV 1219
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----HAASG 268
+I VA G HTL+L + G V+ G GQ GLG + +P I ++ ++G
Sbjct: 2032 RIIDVAIGAEHTLLLHEDGSVYSCGSNENGQAGLGESVSNANSPTKIDEIQSPVTSVSAG 2091
Query: 269 KDRPLLVRQGSVNSSGK 285
+ L V + + +GK
Sbjct: 2092 LEHSLFVAEDGIYVTGK 2108
>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 310
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 85/245 (34%), Gaps = 54/245 (22%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G + TWG + K P + +AA G HC++V +
Sbjct: 50 SLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQ 109
Query: 123 GEVYTWGWRE--------------------------CVPSAKVTRDFGSAGSFQKDSTGK 156
G Y WG E C P V R + G+ T +
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTV-RQVAAGGTHSVVLTRE 168
Query: 157 QSALPTEQA-PPSD--------KRAGEEVVKR---------------RKTSSAREESENP 192
Q PP D + G E V+ R + E
Sbjct: 169 GHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQL 228
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--- 249
+GD T P V + + +AAGG H+ L+D G+V+GWG G G+LGLG
Sbjct: 229 GTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKS 288
Query: 250 IKMVP 254
KMVP
Sbjct: 289 SKMVP 293
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 13/116 (11%)
Query: 18 KETVVYMWG--YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
+E V+ WG + PG + S +P R+ G ++ + + G LA E G+L+ W
Sbjct: 167 REGHVWTWGQPWPPGDIKQIS-----VPVRVQGLENVRLIAVGAF-HNLALEEDGRLLAW 220
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G+ ++ GQ L +G T P P+ + ++V AAG H ++T+ GEVY WG
Sbjct: 221 GN-NEYGQ--LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG 273
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 79/234 (33%), Gaps = 74/234 (31%)
Query: 72 LITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+I WGS +D GQ + + + E SV +G + +++ + G ++TWGW
Sbjct: 7 IIAWGSGED-GQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWN 65
Query: 132 ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
Q+ + G Q TE P K
Sbjct: 66 ------------------QRGTLGHQPETKTENIPSRVKALAN----------------- 90
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
VKIT+ A GG H L + D G+ + WG GQ G
Sbjct: 91 --------------------VKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG------ 124
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
E RP VR+ V A + V+++A GG HS V+T
Sbjct: 125 ----------EEPLKDEMGRP--VRRDIVIPKRCAPKLTVRQVAAGGTHSVVLT 166
>gi|403350728|gb|EJY74833.1| hypothetical protein OXYTRI_03788 [Oxytricha trifallax]
Length = 1271
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 208 LNPGV-------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
LNP V +I ++A G H+L+L+D V+ WG G EGQLGL I++ TP I
Sbjct: 488 LNPTVLKPLRDKRIVQIACGENHSLVLTDKADVFAWGRGFEGQLGLSKSIEIASTPQYIK 547
Query: 261 C-----LEHAASGKDRPL-LVRQGSVNSSGKA 286
+ + A+G L + + GSV G+A
Sbjct: 548 SFYGKPVSYIAAGSQYSLAITKDGSVWGWGEA 579
Score = 43.1 bits (100), Expect = 0.18, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG--KQSALPTE 163
++ ++G H + +T G+V+++G +G+F G K PT
Sbjct: 449 LLSVSSGRNHSLHLTRDGDVFSYG----------------SGTFSAVGHGGSKGQLNPTV 492
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF-----------FTLSPCLVTLNPGV 212
P DKR + + ++++ A G F +P + G
Sbjct: 493 LKPLRDKRIVQIACGENHSLVLTDKADVFAWGRGFEGQLGLSKSIEIASTPQYIKSFYGK 552
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
++ +AAG +++L ++ G VWGWG GQLG+G +
Sbjct: 553 PVSYIAAGSQYSLAITKDGSVWGWGEAKLGQLGMGKQ 589
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV---------V 107
G ++LA ++ G + WG A GQ L GK E LPT+ S +
Sbjct: 558 AAGSQYSLAITKDGSVWGWGEAK-LGQ--LGMGKQREVR----LPTKISFGDDENAKNFI 610
Query: 108 KAAAGWAHCVSVTEAGEVYTWGW 130
+ +AG+ H ++T+ G +YTWG+
Sbjct: 611 QCSAGYGHSAALTQEGHLYTWGF 633
>gi|336381401|gb|EGO22553.1| hypothetical protein SERLADRAFT_473539 [Serpula lacrymans var.
lacrymans S7.9]
Length = 553
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 45/164 (27%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
PF V+KAAAG V +TE+G+V+T+G +G+
Sbjct: 179 PFHNGARERVIKAAAGITFSVVLTESGKVFTFG------------------------SGE 214
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+ L + R GE +V KT+ E + P V KI +
Sbjct: 215 KGQL-------GNGRTGEHIVTGNKTAYDIE-------------VEPIRVRGLDDKKIVQ 254
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
++ G +HT+ L G V+ WGY G +LGLG++ + V P ++P
Sbjct: 255 ISCGQQHTVALDSQGLVYVWGYNGYCRLGLGNQ-QDVLIPKIVP 297
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 85/218 (38%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPT--LVKDIINV 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ T++ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4137 EEVVQMSCGFKHSAVVTAD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4194
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H V+V+ G + W FG G + K G +A + Q D
Sbjct: 4195 ACGLNHTVAVSTDGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--VD 4237
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P V L GV
Sbjct: 4238 ILCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGV 4294
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I +A G HTL LS G V+ WG EGQLGLG V P L+ L+
Sbjct: 4295 FIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLVTVLQ 4344
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 89/234 (38%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P SP +CG + + G A G+L G++DD + S G
Sbjct: 4023 PAAAPSFSPAQQVVCGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4081
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4082 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4123
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S + + FT
Sbjct: 4124 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4172
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HT+ +S D VW +G G G+LGLG+
Sbjct: 4173 NTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN 4226
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 115/293 (39%), Gaps = 27/293 (9%)
Query: 29 PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYL 86
P + P K L + A + S ++ G G+ +LA +++GK+ +WGS G+ +
Sbjct: 167 PVSEPSKQKSLDKLQAII---QSLNNIVGIAAGYYHSLALNDTGKIFSWGSGS-WGKLGI 222
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG--WRECVPSAKVTRDFG 144
S + E+P + VV A G H ++T G+V+TWG R + V +F
Sbjct: 223 GSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFS 282
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC 204
+ G Q + R+G+ S GD + P
Sbjct: 283 PRLNASLRKCGAQKIRCGDDHTLVILRSGQ------LYSMGANTHGQLGLGDATDRIIPT 336
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLE 263
LVT K+ + A G ++ L++ G+V+ +G E L R + +P LI +
Sbjct: 337 LVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVA 396
Query: 264 HAA----SGKDRPLLVRQGSVNSSGKAGRSY--------VKEIACGGRHSAVV 304
A + D L R +S ++ R V + CG H AV+
Sbjct: 397 RTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVI 449
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 28/114 (24%)
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
P+ L + +LN I +AAG H+L L+D G+++ WG G G+LG+GS
Sbjct: 171 PSKQKSLDKLQAIIQSLN---NIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDAN 227
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+P + L++ S V IACG H+A +T
Sbjct: 228 -AESPRFVASLQN------------------------SKVVHIACGAHHTAAIT 256
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP----HLIP 260
G I +VAAG +H+L LS G+VW WG GQLG + K+ PTP H IP
Sbjct: 1429 GKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIP 1483
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 32/126 (25%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCL-------- 262
+ + +A G T L+D G+V+ WG +G+LGLGS + + P L+ L
Sbjct: 553 MSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQI 612
Query: 263 ----EHAASGKDRPLLVRQGSVNSSGKAG----RSY--------------VKEIACGGRH 300
HAA D GS N+ G+ G SY ++ IACGG H
Sbjct: 613 SLGRNHAACSTDMHKFFVWGS-NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWH 671
Query: 301 SAVVTD 306
+ + T+
Sbjct: 672 TLISTN 677
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 53 KDVCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVK 108
+ + CG A A S+ G LITWG+ + GQ L +G + P LP + +VK
Sbjct: 1853 RQIVSASCGAAHTAAVSQYGDLITWGNGRN-GQLGLKAGLSKDIENPVQLPAICNDPMVK 1911
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECV 134
G + V+E GE+Y G+ +
Sbjct: 1912 VVCGQEVTIVVSEKGELYMAGYESTI 1937
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 85/244 (34%), Gaps = 54/244 (22%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
G Y S + + P+ + SVV A G ++T+ G+VYTWG SA+
Sbjct: 530 HGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWG-----KSAQGK 584
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
GS GK A+ P + VV + S R + +FF
Sbjct: 585 LGLGS---------GKPLAIVV---PQLVQDLSSHVVC--QISLGRNHAACSTDMHKFFV 630
Query: 201 L------------------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
P +T I +A GG HTLI ++ G V G G G
Sbjct: 631 WGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHG 690
Query: 243 QLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
QLG G + +P + G G S++ +++ G SA
Sbjct: 691 QLGHGDYESLTALSKTLPYFKKIVEG-----------------FGDSFIVKVSAGKESSA 733
Query: 303 VVTD 306
+T+
Sbjct: 734 AITN 737
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 25/97 (25%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I V AGG H+ LS G ++ WG GQLGLG+ +P I L+
Sbjct: 1749 IIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLD---------- 1798
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSYP 310
V +++ G HSAV+ ++ P
Sbjct: 1799 ---------------GVVMDVSLGANHSAVLMQVTSP 1820
>gi|408500685|ref|YP_006864604.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465509|gb|AFU71038.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1231
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 31/247 (12%)
Query: 28 LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLT 87
+P T+P K+P +P G + G +LA G L +WG D+ T
Sbjct: 219 IPATAPSKAPEGTPGLVTPPTGVHFTQTSAG-MSLSLAMGSDGNLYSWGLNDNGQLGRST 277
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
+ + P PT + AG++ +++ G +Y+WG ++ RD GSA
Sbjct: 278 TITPADRPGLVTPPTGVHFTQFTAGYSQSLAIGSDGNLYSWGDNS---RGQLGRDTGSA- 333
Query: 148 SFQKDSTGKQSALPT-------------EQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
D+T + ++PT A SD + +SENP +
Sbjct: 334 --TYDATPGRVSMPTGITCTQISGGTFYSMALGSDGNIYSWGDNTQGELGRNTDSENPGT 391
Query: 195 GDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
P V L GV K T +AA G +L + G ++ WGY GQ+G R
Sbjct: 392 -------LPNKVILPKGVTKYTAIAAQGWCSLAMGSDGNLYSWGYNSYGQMG---RDTDT 441
Query: 254 PTPHLIP 260
PT ++ P
Sbjct: 442 PTQNIDP 448
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 93/255 (36%), Gaps = 75/255 (29%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK--------A 109
GG +++A G + +WG D Q L G++ ++ P LP + + K A
Sbjct: 355 GGTFYSMALGSDGNIYSWG---DNTQGEL--GRNTDSENPGTLPNKVILPKGVTKYTAIA 409
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A GW +++ G +Y+WG+ +G G + + PT+
Sbjct: 410 AQGWC-SLAMGSDGNLYSWGYNS----------YGQMG--------RDTDTPTQN----- 445
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILS 228
+ P VTL PGV + T+ AG +HTL +
Sbjct: 446 -------------------------------IDPGKVTLPPGVTRFTQFGAGNQHTLAVG 474
Query: 229 DMGQVWGWGYGGEGQLGLGSRI------KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
G ++ WG GQLG + V P I C++ A +L G++ S
Sbjct: 475 SDGNLYSWGSNKFGQLGRDANSLRNATPGKVSLPAGISCIQINAENTSSLILGSDGNLYS 534
Query: 283 SGKAGRSYVKEIACG 297
G RS + G
Sbjct: 535 WGDNSRSQLGRTTTG 549
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 179 RRKTSSAREESENPASG-DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ K S R+ +E PA+ + +P LVT GV T+ +AG +L + G ++ WG
Sbjct: 207 QNKASLGRDTNEIPATAPSKAPEGTPGLVTPPTGVHFTQTSAGMSLSLAMGSDGNLYSWG 266
Query: 238 YGGEGQLGLGSRIKMVPTPHLI 259
GQLG + I P L+
Sbjct: 267 LNDNGQLGRSTTITPADRPGLV 288
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 76/198 (38%), Gaps = 15/198 (7%)
Query: 60 CGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASV----VKAAAGW 113
GF++ + G WG D GQ T+ P PLP A+ + AAG
Sbjct: 745 AGFSIGVTSDGNAYAWGGNDYGQLGQDPSTTATQ-YAPTKVPLPDGAATGFTYTQVAAGG 803
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H +++ VY+WG + +R S K G+ A +D A
Sbjct: 804 THVLAIGSDQTVYSWGQNQYGQLGDGSRQDHSKPQPVKGPDGQPFKATQVTAGFTDS-AA 862
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVT----LNPGVKITKVAAGGRHTLILSD 229
++ R + + ++ S + L+P L + G+K +V+A + L
Sbjct: 863 IDLNGRVYVWGSETKDQDTYSAPK---LTPALAKDPSGSDKGLKAVQVSARYSFLMALDA 919
Query: 230 MGQVWGWGYGGEGQLGLG 247
G V+ WGY GQ G G
Sbjct: 920 DGNVYTWGYNNHGQFGNG 937
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G T+VAAGG H L + V+ WG GQLG GSR
Sbjct: 793 GFTYTQVAAGGTHVLAIGSDQTVYSWGQNQYGQLGDGSR 831
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 117/311 (37%), Gaps = 57/311 (18%)
Query: 30 GTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTS 88
G EK+P+ P + G K+V CGG L G + T GS + GQ L
Sbjct: 13 GIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLM--HDGSVYTCGS-NSCGQ--LGH 67
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGS 148
K G +PE + + G H ++V E G+++ WG G G
Sbjct: 68 DKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGA-------------GDGGQ 114
Query: 149 FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-----NPASGD------E 197
+T +P D R + + + + + + SG E
Sbjct: 115 LGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGE 174
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-------- 249
L P + G+ + ++ AGG H+ LS G V+GWG GQLGL +
Sbjct: 175 PSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCH 234
Query: 250 IKMVPTPHL--IPC-LEH-AASGKDRPLL---------VRQGSVNSSGKAGR------SY 290
IK + + + I C EH AA KD L + GS NS R +
Sbjct: 235 IKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTE 294
Query: 291 VKEIACGGRHS 301
V +IACG H+
Sbjct: 295 VSQIACGRHHT 305
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 28/121 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS--RIKMVPTPHL----IPCLEHAA 266
+I++V G +H + LS GQ++ WG GQLGLG K+ P P IP + A
Sbjct: 137 RISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITA 196
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRS-----------------YVKEIACGGRHSAVV 304
G L G+V N +G+ G + V I+CG H+A +
Sbjct: 197 GGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAAL 256
Query: 305 T 305
T
Sbjct: 257 T 257
>gi|342181804|emb|CCC91283.1| putative regulator of chromosome condensation [Trypanosoma
congolense IL3000]
Length = 1149
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 82/210 (39%), Gaps = 35/210 (16%)
Query: 52 WKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK- 108
++DVC CGF A+A SG L +WG + GQ L G E E P E SVVK
Sbjct: 804 FEDVCAVDCGFSFAIAIGSSGALYSWG-WNTHGQ--LGHGLAVELGESVFTPKEISVVKT 860
Query: 109 ------AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
A G V++T+ GEVYTWG +F G +
Sbjct: 861 LSQVIQVACGGTFVVALTQCGEVYTWG----------------EAAFCGHGNGVEKFFLC 904
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPA-------SGDEFFTLSPCLVTLNPGVKIT 215
+ S + R ++ + A +G + P V LN +
Sbjct: 905 PKRLASLQDISAVAAGDRHAAALSYDHTIYAWGNGPVGNGGAAGVMVPTPVALNFVHPVR 964
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
++ G +T +++D+G ++ WG GQ G
Sbjct: 965 QLFCGQVNTFVITDVGDLYVWGLNTSGQCG 994
>gi|449297034|gb|EMC93053.1| hypothetical protein BAUCODRAFT_76837 [Baudoinia compniacensis UAMH
10762]
Length = 510
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 93/258 (36%), Gaps = 68/258 (26%)
Query: 24 MWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE-- 81
++G+ P T P+L P ++ G ALA + +G + WGS
Sbjct: 231 IFGFNPTTITANRPVLVPELKKITH-------IAAGANHALALASNGAVFAWGSGQQNQL 283
Query: 82 GQSYLTSGK-HGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
G+ + K G P F LP A +V G H ++ +AG V+ WG
Sbjct: 284 GRRVVERTKTEGLKPREFGLPKGAKNGIVAIETGSYHSFAIDKAGNVHAWGLN------- 336
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
++G G +P + A DE
Sbjct: 337 ---NYGETG------------IP-----------------------------DNAGADEA 352
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPH 257
F L P ++ G K+ + GG H+L ++ G WG GQ+G+ IK +P
Sbjct: 353 FVLKPRIIEALQGKKVISIKGGGHHSLCATEDGDCLIWGRIDGGQIGISEDTIKAMPEDK 412
Query: 258 LIPCLEHAASGKDRPLLV 275
++ SG+ R LLV
Sbjct: 413 ----VKSDESGRPRILLV 426
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 97/273 (35%), Gaps = 88/273 (32%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHC 116
CG A LA ++ G++ +WG A GQ L+ + + P + +V+ A G H
Sbjct: 75 CGEAHTLALNDKGQVFSWGHAA-HGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHS 133
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++++ ++Y+WG Q G S + E AP
Sbjct: 134 LALSKESDIYSWGQN------------------QYGQLGLGSEIKKESAP---------- 165
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
R S A G+ +AAGG H+ L+ G ++GW
Sbjct: 166 --RHIKSLA-------------------------GIPFAHIAAGGGHSFALTMSGAIFGW 198
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQGSVNSSGKAGR-- 288
G GQLGL P L+ L H G+D L ++G V + G G
Sbjct: 199 GRNKFGQLGLNDETDR-SAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQ 257
Query: 289 --------------------SYVKEIACGGRHS 301
S V +IACG +H+
Sbjct: 258 LGHNSTNHEVNPRKVFELMGSIVTQIACGRQHT 290
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HL-----IPCLEHA 265
++I +VA G H+L LS ++ WG GQLGLGS IK P H+ IP A
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIA 180
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAG----------------RSY-VKEIACGGRHSAV 303
A G L G++ N G+ G RS + I CG H+A
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAA 240
Query: 304 VT 305
+T
Sbjct: 241 LT 242
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
I V+ G HTL L+D GQV+ WG+ GQ+GL + P I L
Sbjct: 70 IVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSL 118
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 82/236 (34%), Gaps = 63/236 (26%)
Query: 18 KETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
KE+ +Y WG G E +P + G + + GG G + A + SG +
Sbjct: 138 KESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGG-GHSFALTMSGAIF 196
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC 133
WG + GQ L P ++ G H ++T+ G V+T+G
Sbjct: 197 GWGR-NKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFG---- 251
Query: 134 VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPA 193
G G +ST + V RK
Sbjct: 252 ---------AGGYGQLGHNSTNHE-------------------VNPRKV----------- 272
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGS 248
F L G +T++A G +HTL + G+++ +G GG GQLG GS
Sbjct: 273 -----FELM--------GSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGS 315
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 99/259 (38%), Gaps = 58/259 (22%)
Query: 65 ATSESGKLITWGSADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A + GKL WG + GQ L +GK TP ++ V A G H ++ TE
Sbjct: 139 AVTADGKLFAWGR-NSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEE 197
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEV +WG G G K S S +E P K +KR
Sbjct: 198 GEVLSWG----------AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAA 247
Query: 183 S----------------SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ E SGDE L P +V P + +VA GG HT +
Sbjct: 248 GMLHSACIDEKGTLFIFGQKTEKGFGRSGDE---LRPTVVEEVPFSE--EVACGGYHTCV 302
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
++D G ++ WG G LGLG MV +P ++ +S P
Sbjct: 303 VTDSGDLYSWGSNENGCLGLGG-TDMVRSPEVLK-----SSLFKFP-------------- 342
Query: 287 GRSYVKEIACGGRHSAVVT 305
V +++CG +H+AV++
Sbjct: 343 ----VSKVSCGWKHTAVIS 357
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 109/285 (38%), Gaps = 93/285 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWA 114
CGG L +ESG++ G +D GQ + S + EP + + VV+ +AG
Sbjct: 80 CGGA--HTLFLTESGRVFAAG-LNDFGQLGIGSSVT-HSLEPIEVSGFDEKVVEVSAGNH 135
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +VT G+++ WG ++S+G+ KRAG+
Sbjct: 136 HSCAVTADGKLFAWG---------------------RNSSGQLGL---------GKRAGK 165
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
V RK CL ++ VA G H++ ++ G+V
Sbjct: 166 VVSTPRKVD--------------------CLAD----SRVKMVALGSEHSIATTEEGEVL 201
Query: 235 GWGYGGEGQLGLGSRIKMV--------PTPHLIPCLE------------HAASGKDRPLL 274
WG G G+LG G + ++ TP LI L+ H+A ++ L
Sbjct: 202 SWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTL 261
Query: 275 VRQGSVNSSGKAGRS-------------YVKEIACGGRHSAVVTD 306
G G GRS + +E+ACGG H+ VVTD
Sbjct: 262 FIFGQKTEKG-FGRSGDELRPTVVEEVPFSEEVACGGYHTCVVTD 305
>gi|328872836|gb|EGG21203.1| hypothetical protein DFA_01078 [Dictyostelium fasciculatum]
Length = 413
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 75/195 (38%), Gaps = 65/195 (33%)
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H + + GE+YTWGW SF
Sbjct: 120 GHYHSMIINNKGELYTWGWS----------------SF---------------------- 141
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
AG E K K ++ E S P DE+ + ++ + KVAAG H+L L G
Sbjct: 142 AGGE--KENKETNYNEWS--PRLVDEYVLDNDSIL---QSRDVVKVAAGWGHSLALDSEG 194
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+WGWG+ EGQL + PT H P+L R V SS + V
Sbjct: 195 SIWGWGWNAEGQLFVD------PTRH--------------PVLHRPTKVFSSTSSSSLVV 234
Query: 292 KEIACGGRHSAVVTD 306
++I CG +SA +TD
Sbjct: 235 RDIICGSDYSAFITD 249
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 52/260 (20%)
Query: 53 KDVCGGGCGF--ALATSESGKLITWG-SADDEGQSYLTSGKHGE----TPEPFPLPTEA- 104
D+ CG ++ + G+L TWG S+ G+ + E + + L ++
Sbjct: 112 NDIKSLHCGHYHSMIINNKGELYTWGWSSFAGGEKENKETNYNEWSPRLVDEYVLDNDSI 171
Query: 105 ----SVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPS--AKVTRDFGSAG 147
VVK AAGW H +++ G ++ WGW R V KV S+
Sbjct: 172 LQSRDVVKVAAGWGHSLALDSEGSIWGWGWNAEGQLFVDPTRHPVLHRPTKVFSSTSSSS 231
Query: 148 SFQKDST--GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL 205
+D SA T++ +GE R + A + P +
Sbjct: 232 LVVRDIICGSDYSAFITDKGHVYMVGSGEHGQLGRGNTEA--------------SAYPQI 277
Query: 206 VTLNPGVKITKVAAGGRHTLILSDM-GQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLE 263
V G +I KVA G H+L+L + GQ++ G+ G GQLG+G + ++V TP +P
Sbjct: 278 VQGLQGQRIDKVACGFGHSLLLDEQQGQLFSLGWNGNGQLGVGDTLNRLVATPVSMP--- 334
Query: 264 HAASGKDRPLLVRQGSVNSS 283
DR +L+ G +S+
Sbjct: 335 ------DRVVLIGAGRAHSA 348
>gi|326427987|gb|EGD73557.1| hypothetical protein PTSG_05264 [Salpingoeca sp. ATCC 50818]
Length = 441
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 45/173 (26%)
Query: 96 EPFPLPTEA-----SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
EP P P EA + AA GW H + ++ +G+VY++GW +
Sbjct: 286 EPTPRPVEALQGMCMSMIAAGGW-HSLVLSSSGDVYSFGW-------------NNHHQLG 331
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP 210
+D+T A+P +++ ++S + ++E S L
Sbjct: 332 RDTTDTPPAVPG-------------LIELEESSDSTADNEQTHS-------------LRH 365
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + VA G H+ ++ +GQV+GWG+ GQ G ++ V P +IP L+
Sbjct: 366 GEDVVSVACGSAHSYAVTSVGQVFGWGWAEHGQFGPNTKESHVIKPTVIPFLQ 418
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 25/93 (26%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
KI ++A G H+++L G VW WG GG GQLG GS I PTP RP
Sbjct: 247 KIKQLACGKTHSMVLDTHGDVWAWGRGGFGQLGHGS-IHDEPTP--------------RP 291
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ QG S IA GG HS V++
Sbjct: 292 VEALQGMCMSM----------IAAGGWHSLVLS 314
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G+ ++ +AAGG H+L+LS G V+ +G+ QLG + P LI E + S D
Sbjct: 297 GMCMSMIAAGGWHSLVLSSSGDVYSFGWNNHHQLGRDTTDTPPAVPGLIELEESSDSTAD 356
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
S + G V +ACG HS VT +
Sbjct: 357 -------NEQTHSLRHGEDVVS-VACGSAHSYAVTSV 385
>gi|108756969|ref|YP_633591.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108460849|gb|ABF86034.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 669
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 15/192 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G +LA G + WG L G P P +P V+ AAG H V+
Sbjct: 478 GTGHSLALGADGTVWAWGL---NFHGELGDGTTVSRPLPVQVPGLTGVIAVAAGMYHSVA 534
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ G V+ WGW + + G + Q++S + +P + G +
Sbjct: 535 LRNDGTVWAWGW-------NLKGELGDGTTTQRESPVQ---VPGVTGAIAVAAGGYHSLA 584
Query: 179 RRKTSSARE--ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
++ R ++E+ GD T V ++ +T V AGG H+LIL + VW +
Sbjct: 585 LLSDNTLRAWGKNEDRQLGDGTNTDRHTAVQVSGLTGVTSVFAGGGHSLILRNDQAVWAF 644
Query: 237 GYGGEGQLGLGS 248
G GQLG G+
Sbjct: 645 GSDVSGQLGDGN 656
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 200 TLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPT 255
T+S L PG+ + VAAG H++ L + G VW WG+ +G+LG G+ R V
Sbjct: 507 TVSRPLPVQVPGLTGVIAVAAGMYHSVALRNDGTVWAWGWNLKGELGDGTTTQRESPVQV 566
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
P + + AA G L+ ++ + GK + + RH+AV
Sbjct: 567 PGVTGAIAVAAGGYHSLALLSDNTLRAWGKNEDRQLGDGTNTDRHTAV 614
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
IT +AAG H+L L G VW WG G+LG G+ + P P +P L
Sbjct: 471 NITALAAGTGHSLALGADGTVWAWGLNFHGELGDGTTVSR-PLPVQVPGL 519
>gi|291401444|ref|XP_002717009.1| PREDICTED: hect domain and RLD 3-like [Oryctolagus cuniculus]
Length = 974
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 28/120 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAAS 267
I ++ G H+L LS G+++ WG GQLG+G VPTP + +P ++ +A
Sbjct: 130 IIQITCGDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQIVEHLAGVPLVQISAG 189
Query: 268 GKDRPLLVRQGSVNSSGK-------AGRSYVKE---------------IACGGRHSAVVT 305
L G+V S GK G + K+ +ACGG H+A++T
Sbjct: 190 EAHSMTLSMSGNVYSWGKNDLGQLGLGHTENKDSPCLIEALDNQKVEFVACGGSHTALLT 249
Score = 44.3 bits (103), Expect = 0.080, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRE-----------CVPSAKVTRDFGSAGSFQK 151
E ++++ G H +++++ GE++ WG VP+ ++
Sbjct: 127 EKTIIQITCGDYHSLALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQIVEHL-------- 178
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
+ +P Q + + + S + + G SPCL+
Sbjct: 179 ------AGVPLVQISAGEAHSMTLSMSGNVYSWGKNDLGQLGLGHTENKDSPCLIEALDN 232
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
K+ VA GG HT +L+ GQ++ +G G GQLG S+
Sbjct: 233 QKVEFVACGGSHTALLTQDGQLFTFGAGKYGQLGHKSK 270
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 67/281 (23%), Positives = 104/281 (37%), Gaps = 62/281 (22%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGK----------HGETPEPFPLPTEASV 106
GG G +A G + +WG A GQ L S K + TP L V
Sbjct: 29 AGGDGHTVAVDIKGNVYSWG-ASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVKV 87
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
++ A G AH V++T+ G++Y+W + KD G P + P
Sbjct: 88 IQIACGDAHTVALTQDGKLYSW-----GGGGCGQLGHPDTSAMPKDEDG----CPYQPKP 138
Query: 167 PSDKRAGEEVVKRRKTSSAR------------------------EESENPASGD--EFFT 200
VK+ A + S PA D +
Sbjct: 139 KLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQP 198
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-------- 252
+ C+ L P K+ + G HT++L+D G+++ +G G GQLG G+ +M
Sbjct: 199 IPRCVTALKP-FKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCP 257
Query: 253 -VPTPHLIPCLE-----HAASGKDRPL-LVRQGSVNSSGKA 286
+P P I L+ + G + L R+G V + G+A
Sbjct: 258 FMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEA 298
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 87/226 (38%), Gaps = 36/226 (15%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSV 119
L ++ G+L WG G S L +G P + V + + G H +++
Sbjct: 207 VLLATDDGQLFAWG---HNGYSQLGNGSTNPGLSPVLITANLQNKKVKEVSCGSHHSMAL 263
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T GEV+ WG+ C G GS ST Q K A +
Sbjct: 264 TLDGEVFAWGYNNC----------GQIGS---GSTANQPYPRKVTGCLQGKNASGITCGQ 310
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + + E G+ L+PC V G+ I ++ +G H L L+D
Sbjct: 311 TSSMALVDNGEVYGWGYNGNGQLGIGNNGNQLTPCRVAALQGMCIQQIVSGYGHCLALTD 370
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
G ++ WG GQLG G++ + HL P H + K+R + V
Sbjct: 371 KGLLYAWGANTYGQLGTGTK-----SNHLSPV--HIMADKERVVEV 409
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 25/113 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD T+ P + G K+ ++ G G H L+ +D GQ++ WG+ G QLG GS
Sbjct: 176 TGDGLSTVMPKKLDFLRGKKVASLSYGSGPHVLLATDDGQLFAWGHNGYSQLGNGS---- 231
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L P L A N K VKE++CG HS +T
Sbjct: 232 -TNPGLSPVLITA---------------NLQNKK----VKEVSCGSHHSMALT 264
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S P P ++ G K+ G CG ++A ++G++ WG
Sbjct: 269 VFAWGYNNCGQIGSGSTANQPYPRKVTGCLQGKNASGITCGQTSSMALVDNGEVYGWGY- 327
Query: 79 DDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G +G TP + + +G+ HC+++T+ G +Y WG
Sbjct: 328 --NGNGQLGIGNNGNQLTPCRVAALQGMCIQQIVSGYGHCLALTDKGLLYAWG 378
>gi|192361760|ref|YP_001982981.1| IPT/TIG domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190687925|gb|ACE85603.1| IPT/TIG domain protein [Cellvibrio japonicus Ueda107]
Length = 12743
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETP---EPFPLPTEASVVKAAAGWA 114
G G +LA G++ WGS + GQ + + P + PL V A +
Sbjct: 12315 AGYGHSLALDSLGRVWAWGS-NSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYF 12373
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTR-DFGSAGSFQKDSTGK-QSALPTEQAPPSDKRA 172
+ +++ E+G+++ WG + R GS+GS+ T QSAL + + D A
Sbjct: 12374 N-MALDESGQLWAWG------DNRYGRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGA 12426
Query: 173 GEEVVKRRKTSSAREESENP----ASGDEFFTLSPCLVTLNP--GVKITKVAAGGRHTLI 226
V+ N +G +L P V L+ GV + V G R++++
Sbjct: 12427 -YHVLALDDAGQVWAWGNNSYGQLGNGSTANSLVPVKVNLSALEGVGVQSVEVGNRYSML 12485
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L +G++W WGY G LG G+R + TP LI
Sbjct: 12486 LDKLGRIWTWGYNDYGSLGTGNRQSLY-TPTLI 12517
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 40/221 (18%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAH 115
F +A ESG+L WG D L +G G P T+ S VV G H
Sbjct: 12373 FNMALDESGQLWAWG---DNRYGRLGNGSSGSYLY-LPTATDQSALSSNKVVDFDIGAYH 12428
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++ +AG+V+ WG +G G + + S +P + + + G +
Sbjct: 12429 VLALDDAGQVWAWG----------NNSYGQLG----NGSTANSLVPVKVNLSALEGVGVQ 12474
Query: 176 VVK------------RRKTSSAREESENPASGDEFFTLSPCLVTLNP--GVKITKVAAGG 221
V+ R + + + +G+ +P L+ + G I + AG
Sbjct: 12475 SVEVGNRYSMLLDKLGRIWTWGYNDYGSLGTGNRQSLYTPTLIDQSAFNGAVIHSIDAGN 12534
Query: 222 R-HTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIP 260
H L + + VW WGYGG G++G GS ++P P IP
Sbjct: 12535 SFHNLAMDESNNVWTWGYGGYGEMGNGSYSNSLLPIPVRIP 12575
Score = 43.1 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 61 GFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--------VVKAAAG 112
GF+LA + G+L WG +D GQ + S + T P+P + S ++AA
Sbjct: 11787 GFSLALDDKGQLWAWG-INDRGQLGVASTIYRST---IPVPADMSALGGTRIKTLQAAGD 11842
Query: 113 WAHCVSVTEAGEVYTWGWR--------ECVPSAKVTRDFG--SAGSFQKDSTGKQSALPT 162
+ + E G ++ WG R A V D S G + S G L
Sbjct: 11843 QGYLLD--ELGRLWAWGARVGDWTGMDSESAYAPVQVDLAEVSGGKALQMSAGNNYLLML 11900
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
++ +++ SS+ + EN + D F L +L I+ ++AG
Sbjct: 11901 DE---NNQVWVLGNANNYSASSSSADGEN--NSDNPFLNRVDLSSLGDKSAIS-ISAGSH 11954
Query: 223 HTLILSDMGQVWGWGYGGEGQLGL 246
H L+L D G +W WGY G+LG+
Sbjct: 11955 HDLLLDDEGGIWSWGYNYNGELGV 11978
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G I +AAG +L L D G++W WG GQLG+GS
Sbjct: 10987 GASINALAAGDAFSLALDDRGRLWSWGLNNYGQLGIGS 11024
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
V + VA G + ++ + ++G VW WG+ G+LG G VP P
Sbjct: 11398 VGLASVAVGEQFSIAIDNLGDVWSWGFNNSGELGQGHSDWAVPIP 11442
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
L+ ++ GVKI + H L L G+VW WG GQLG G+ TP ++ ++
Sbjct: 11716 LLPIDEGVKIESFVSSNDHYLALDHKGRVWAWGENYGGQLGNGT----YDTPQVLQPIDP 11771
Query: 265 AA 266
AA
Sbjct: 11772 AA 11773
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
L ++ I ++AG H+L L +G+VW WG GQLG
Sbjct: 12301 LRSMEDSADIIAISAGYGHSLALDSLGRVWAWGSNSSGQLG 12341
Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
GV +++VA H L + G++W WG GQLG GS
Sbjct: 11343 GVALSRVATNTAHNLAIDGQGKLWSWGKNTYGQLGNGS 11380
Score = 37.4 bits (85), Expect = 9.5, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTP 256
+L L D GQ+W WG GQLG+ S I +P P
Sbjct: 11789 SLALDDKGQLWAWGINDRGQLGVASTIYRSTIPVP 11823
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G + WG G L PE +V A GW H ++V+ +G
Sbjct: 185 AVTEDGDIYGWGWGR-YGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGS 243
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + D + R T +
Sbjct: 244 LYTYGWSK----------YGQLGH----GDFEDHLVPHKVEALKDSSTSQISGGWRHTMA 289
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + +GD SP V K+ +VA G RHTL ++ V+
Sbjct: 290 LTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVF 349
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG G + TP +I L
Sbjct: 350 AWGRGTSGQLGHGEIVDR-NTPVIIDAL 376
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 31/210 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G ++A L TWG +D GQ HG+ + +PT S + G
Sbjct: 22 GASHSVALLAGNVLCTWGRGED-GQL-----GHGDAEDRL-VPTVISGFDAPGITSVICG 74
Query: 113 WAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
H + +E +VY+WGW DFG G F + +Q
Sbjct: 75 ADHTTAYSEDEHQVYSWGWG----------DFGRLGHGNSTDVFTPQPVKALQGIKIKQL 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D + S R ++ G +L P + G+ + +AAG HT
Sbjct: 125 ACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTA 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
+++ G ++GWG+G G LGLG R + VP
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRFVP 214
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKD 152
TP+P + + A G +HC++VT AGEV +WG + G G +D
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQN----------GQLGLGTTED 158
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLS 202
S Q+ E AG E T++ E+ + N GD
Sbjct: 159 SLLPQTIQAFEGISVKMIAAGAE-----HTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFV 213
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P V+ G K+ VA G RHT+ +S G ++ +G+ GQLG G + PH + L
Sbjct: 214 PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKVEAL 272
Query: 263 EHAASGK 269
+ +++ +
Sbjct: 273 KDSSTSQ 279
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ +P V G+KI ++A G H L ++ G+V WG GQLGLG+ +
Sbjct: 102 GNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSL- 160
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P I E + VK IA G H+A VT+
Sbjct: 161 LPQTIQAFEGIS------------------------VKMIAAGAEHTAAVTE 188
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ +P P E V + A GW H +
Sbjct: 282 GGWRHTMALTSDGKLYGWG-WNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTL 340
Query: 118 SVTEAGEVYTWG 129
+ TE V+ WG
Sbjct: 341 AFTEKKNVFAWG 352
>gi|110637510|ref|YP_677717.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
gi|110280191|gb|ABG58377.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
Length = 911
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 19/190 (10%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+ +G L TWG ++ G+ L G + E P + + + + A AG H V++ G
Sbjct: 232 IGIKANGTLWTWG-FNNGGE--LGIGNNDEKHTPVQVGADQNWLYAVAGSNHIVALKVDG 288
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDS---TGKQSALPTEQAPPSDKRAGEEVVKRR 180
++ WG E + G+ + Q+DS G + T A + A +K
Sbjct: 289 SLWGWGLNEA-------GEIGNGNTVQQDSPVRVGTDNDWTTLAAGSNHTLA----IKSN 337
Query: 181 KTSSAREESENPASGDEFFTLSPCLVTLNPGVKI--TKVAAGGRHTLILSDMGQVWGWGY 238
T A + G+ TL P + + G +V+AG H++ L G +W WGY
Sbjct: 338 GTLWAWGHNVRGNLGNGTATLDPATLPVQVGTDADWIRVSAGLDHSVALKANGTLWAWGY 397
Query: 239 GGEGQLGLGS 248
GQLG GS
Sbjct: 398 NVRGQLGYGS 407
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 93/246 (37%), Gaps = 35/246 (14%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
++ WGY + G S +P ++ +W + G + G L TWG D
Sbjct: 392 LWAWGYNVRGQLGYGSGTDKHLPVQIGTAHTWVAI-NAGTYHTIGVKADGSLWTWG---D 447
Query: 81 EGQSYLTSGKHGETPEPFPLPTE-ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
+ L G + P P + T + AA A + + G ++TWG
Sbjct: 448 NTNAQLGDGGTADQPVPHSIRTAPDDWISIAASNAFSMGLKANGTIWTWG---------- 497
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
F+ D K S+ P + SD+ + + + A GD F
Sbjct: 498 ------LNPFETDGQYKNSS-PVQTG--SDQNWKSIATGSNYILALKADGTLWAWGDNFS 548
Query: 200 ------TLSPCLVTLNPGVKITKV---AAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
T P ++ G T V AA G + + G +W WG+ +G+LGLG+ +
Sbjct: 549 GQLGDGTEQPRMLPKQIGTATTWVSIAAASGVQSFGIQADGSLWSWGHNYDGELGLGTNL 608
Query: 251 K-MVPT 255
K +VPT
Sbjct: 609 KTLVPT 614
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 24/92 (26%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I V+ G HTL L+D GQ++ WG G +GQLGL + + V P I CL
Sbjct: 86 IVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQ------- 138
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ ++ACG RHS ++
Sbjct: 139 -----------------IAQVACGYRHSHALS 153
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 67/308 (21%), Positives = 117/308 (37%), Gaps = 58/308 (18%)
Query: 42 IPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
I R C K VC GCG + + G + T G +D GQ L K + PE
Sbjct: 23 IEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCG-CNDLGQ--LGHEKPRKKPEHVV 79
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+V + G +H +++ + G++++WG GS G ++ +
Sbjct: 80 ALDAQIIVAVSGGESHTLALNDKGQIFSWG-------------LGSDGQLGLNNFEECVR 126
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF-----------TLSPCLVTL 208
+P SD + + R + + + + + G F +P ++
Sbjct: 127 VPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQS 186
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
G+ +++AGG H+ ++ G V+GWG GQLGL P L+ L
Sbjct: 187 LQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRW-FPALLKSLRSQRVI 245
Query: 264 HAASGKDR-PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRH 300
+ + G+D L ++G V + G G + V +I+CG +H
Sbjct: 246 YVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQH 305
Query: 301 SAVVTDMS 308
+ T S
Sbjct: 306 TLAFTPSS 313
>gi|299116189|emb|CBN74538.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 117/301 (38%), Gaps = 78/301 (25%)
Query: 15 EECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
EE ++ V + LPG S + + A CGG + A +ESG++ T
Sbjct: 128 EEMRDMDVKVPRLLPGLSKHR------VTAVTCGGIA-----------TAALTESGRVFT 170
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTE-----ASVVKAAAGWAHCVSVTEAGEVYTWG 129
WGS+DD G L+ + PE FP + A+++ A+G +++ +G+VY WG
Sbjct: 171 WGSSDDGGIGRLSG---PDAPEQFPGEVKEGLEGATIIGLASGDCQTIALDLSGKVYGWG 227
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK--RAGEEVVKRRKTSSARE 187
C KD GKQ P+DK +A + KR
Sbjct: 228 ---CF----------------KDKEGKQWF-----QAPADKGSKACKGAAKR-------- 255
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
P +++ P + + G L L+ G+V WG G G+LG
Sbjct: 256 ---------------PIVISGLP-PHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGRE 299
Query: 248 -SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS--GKAGRSYVKEIACGGRHSAVV 304
+K+ P P + G R L G ++ G A VK I CG HS +V
Sbjct: 300 VCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLLV 359
Query: 305 T 305
T
Sbjct: 360 T 360
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 17/198 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
++SG+L +G +D GQ L +H TP+ + A G H + T G
Sbjct: 476 VITDSGELYAFG-MNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGG 534
Query: 125 VYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR--- 179
++ G D+G G ++ +LP E VV
Sbjct: 535 LFACG----------KNDYGQLGLGHNRQIKVASLVSLPNEMVSYVASGYYHSVVVTNSG 584
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
R S R + G++ P +V L+ ++ + G HT++LS+ GQV+ +G
Sbjct: 585 RTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGRN 644
Query: 240 GEGQLG-LGSRIKMVPTP 256
+GQLG GS ++P P
Sbjct: 645 NKGQLGNRGSADALLPVP 662
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 82/251 (32%), Gaps = 86/251 (34%)
Query: 58 GGCGFALATSESGKLITWGSAD--DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
GC +A ++SG +WG D G LT+ H P+ + + A+ + H
Sbjct: 416 NGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVH--VPKLIESLKDKKLRYASVSYHH 473
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+T++GE+Y +G +C G D T QS
Sbjct: 474 SAVITDSGELYAFGMNDC-------------GQLGLDHTQHQS----------------- 503
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+P LV G +I+ VA G HT+I + G ++
Sbjct: 504 --------------------------TPQLVKGFEGTEISMVACGLYHTIICTATGGLFA 537
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIA 295
G GQLGLG RQ V S V +A
Sbjct: 538 CGKNDYGQLGLGHN--------------------------RQIKVASLVSLPNEMVSYVA 571
Query: 296 CGGRHSAVVTD 306
G HS VVT+
Sbjct: 572 SGYYHSVVVTN 582
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 24/111 (21%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
+ L P + VK + G H + L+D G + WGY GQLG + V
Sbjct: 393 ERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHV 452
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LI L KD+ L R SV SY HSAV+TD
Sbjct: 453 PKLIESL------KDKKL--RYASV--------SY--------HHSAVITD 479
>gi|148234769|ref|NP_001090058.1| uncharacterized protein LOC735132 [Xenopus laevis]
gi|66911611|gb|AAH97888.1| MGC115671 protein [Xenopus laevis]
Length = 449
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 50/184 (27%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA SE G+L WG+++ + +T P P V + A G C++V E G
Sbjct: 281 LAVSEEGQLFGWGNSEYMQLACVTDSTQVNVPRYLPFQHVGRVKQVACGGTGCIAVNEDG 340
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG+ G K ++ P E PPS
Sbjct: 341 SVFVWGY----------------GILGKGPNFLEAQQP-EMIPPS--------------- 368
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
F LS NP +++T+V +G H +++ G+++ WG G
Sbjct: 369 --------------LFGLS----DFNPDIRVTRVFSGLGHFAAMNNRGELFVWGKNLRGC 410
Query: 244 LGLG 247
LG G
Sbjct: 411 LGTG 414
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 62/247 (25%), Positives = 94/247 (38%), Gaps = 39/247 (15%)
Query: 20 TVVYMWGY-------LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESG 70
T +Y WG L G E+ IL+P + K V CG L + SG
Sbjct: 5 TELYCWGNTSHGQLGLGGIEDEQ--ILTPSQVPWTPDSAIKQV---ACGHRHTLFLTSSG 59
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ GS D S L + P P + VV+ A G H ++++E G+V +WG
Sbjct: 60 RVYACGSND---HSQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGD 116
Query: 131 REC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
+C V K+ R S Q S T G + +
Sbjct: 117 NDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYS--WGSNIYGQ 174
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
++ +E + + P +T G+ + +A GG H+ I+S V+GWG
Sbjct: 175 LGVNTPKEVTHSN---------QPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRN 225
Query: 240 GEGQLGL 246
GQLGL
Sbjct: 226 NCGQLGL 232
Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 75/288 (26%), Positives = 106/288 (36%), Gaps = 74/288 (25%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK---HGETPEPFPLPTEASVV 107
K V CG +LA + G+L +WGS + GQ + + K H P V
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGS-NIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVA 201
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP 167
A G H ++++ V+ WG C G G D T + + PT+
Sbjct: 202 AIACGGNHSFIISKSSAVFGWGRNNC----------GQLG--LNDETSR--SYPTQ---- 243
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEF----------FT----------------- 200
+K +T R A GDEF FT
Sbjct: 244 ---------LKTLRTLGVR----FVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANE 290
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ P +V G IT+VA G RHTL L G+V+G+G G GQLG S K + P ++
Sbjct: 291 MLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRS-TKSLTLPQVV 349
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
+ SG + SS + +I GG S V T +
Sbjct: 350 IGPWVSPSG--------SALLQSSDAKVSVVIHQIFSGGDQSFVTTTL 389
Score = 45.1 bits (105), Expect = 0.048, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 85/231 (36%), Gaps = 55/231 (23%)
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T E+Y WG S G + L Q P + A ++V
Sbjct: 1 MTAGTELYCWG-------------NTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVAC 47
Query: 179 RRK-----TSSAR----EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ TSS R +++ G + T P L+ + ++A G RH++ LS+
Sbjct: 48 GHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSE 107
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLI-----PCLEHAASGKDRPL-------LVRQ 277
GQV WG GQLG + +V P ++ + A G + L L
Sbjct: 108 WGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSW 167
Query: 278 GSVNSSGKAGRSYVKE--------------------IACGGRHSAVVTDMS 308
GS N G+ G + KE IACGG HS +++ S
Sbjct: 168 GS-NIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSS 217
>gi|344268675|ref|XP_003406182.1| PREDICTED: alsin [Loxodonta africana]
Length = 1658
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 94/223 (42%), Gaps = 47/223 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVTRDFGSA 146
TPE P +V++AA G H + +TE GEVY++G WR E PS+ V + +
Sbjct: 31 TPERLPGWGGKTVLQAALGMKHGILLTEDGEVYSFGTLPWRRDPAEVSPSSPVLENALAG 90
Query: 147 GSFQKDSTGK-QSALPTEQAPPS---DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
+TG S TE + AG+ V ++ + NP S + T S
Sbjct: 91 QYVVTVATGSFHSGAVTESGTVYMWGENSAGQCAVANQQYVA----EPNPVSISDSET-S 145
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L V+I ++A G HTL LS ++W WG G QLGL + V P +
Sbjct: 146 PLL-----AVRILQLACGEEHTLALSISREIWAWGTG--CQLGLITTTFPVTRPQKV--- 195
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
EH AGR V ++ACG HS +
Sbjct: 196 EHL--------------------AGR-VVLQVACGAFHSLALV 217
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P V G ++ + AGG H+L L+ QV+ WG GQLG VP
Sbjct: 543 GDVLPRLQPLCVKFLDGKEVIYLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVP 602
>gi|148263849|ref|YP_001230555.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
gi|146397349|gb|ABQ25982.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
Length = 417
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP---TPHLIPCLEHAASG 268
IT++AAGG H+L L G VW WGY G GQLG GS + K +P T +P + AA G
Sbjct: 198 SITRIAAGGSHSLALDSSGAVWAWGYNGYGQLGDGSLVDKKLPVKLTGITVPVVAIAAGG 257
Query: 269 KDRPLLVRQGSV 280
+ G+V
Sbjct: 258 AFSVAVDNNGAV 269
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 66/176 (37%), Gaps = 15/176 (8%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
S+ + AAG +H +++ +G V+ WG+ G K K + +
Sbjct: 198 SITRIAAGGSHSLALDSSGAVWAWGYNGY-------GQLGDGSLVDKKLPVKLTGITVPV 250
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGV---KITKVAA 219
+ A V A + G++ T S P V L G I +AA
Sbjct: 251 VAIAAGGAFSVAVDNNGAVWAWGYNGFGQLGNKSTTDSNVPVQVVLEDGTPLPNIKAIAA 310
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
G H L L G +W WGY G GQLG + I TP +P A D P V
Sbjct: 311 GLDHVLALDSNGAIWAWGYNGLGQLGNNTTINS-STPVQVPAFTAAL--IDSPFTV 363
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 20/88 (22%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+T VAAGG H+L L + G VW WG GQLG PL
Sbjct: 142 VTAVAAGGFHSLALKN-GTVWSWGENTNGQLGRNVT-------------------DTSPL 181
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHS 301
+ Q + G + + IA GG HS
Sbjct: 182 IAGQVMTDPPNGIGLTSITRIAAGGSHS 209
>gi|67541629|ref|XP_664582.1| hypothetical protein AN6978.2 [Aspergillus nidulans FGSC A4]
gi|40742434|gb|EAA61624.1| hypothetical protein AN6978.2 [Aspergillus nidulans FGSC A4]
gi|259483716|tpe|CBF79334.1| TPA: RCC1 Chromatin-associated guanine nucleotide exchange factor
for Ran (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 533
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 51/246 (20%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDE--GQSYLTS 88
T+P+ P L I +CG + LA ++ G +++WGS G+ +
Sbjct: 275 TTPKLLPDLKKIKHLVCGDN-----------HVLALNDKGAVLSWGSGQQNQLGRRIIER 323
Query: 89 GK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
K +G P F LP +V AG H +V ++G+V+ WG FG G
Sbjct: 324 NKLNGLQPREFGLPK--GIVHIGAGAFHSFAVHQSGKVFAWGLNS----------FGETG 371
Query: 148 SFQKDSTGKQSAL--PTEQAPPSDKRAGEEVVKRRKTSSAREESE--------NPASGDE 197
++++ ++A+ PT S K + + +A ++ E +G +
Sbjct: 372 -IRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLK 430
Query: 198 FFTLSPCLV--------------TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
TL V T PG+K VAAG H++ + G+ W WG+ Q
Sbjct: 431 IDTLPDDAVIKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQ 490
Query: 244 LGLGSR 249
G G++
Sbjct: 491 TGQGTQ 496
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 47/203 (23%)
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
P LP + VV+ A G HCV++T +V TWG G+ +D+T
Sbjct: 140 NPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWG-------------VNDQGALGRDTTW 186
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNP--- 210
+ + + + S + +NP L+P C T P
Sbjct: 187 EGGYKDMDN-------------RDSDSDSDSDSDDNP-------DLNPHECTPTAIPSSA 226
Query: 211 ---GVKITKVAAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCL--- 262
G I +VAAG + L+D GQV+GWG +G LG ++ K+ TP L+P L
Sbjct: 227 FPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKI 286
Query: 263 EHAASGKDRPL-LVRQGSVNSSG 284
+H G + L L +G+V S G
Sbjct: 287 KHLVCGDNHVLALNDKGAVLSWG 309
>gi|293344154|ref|XP_001066157.2| PREDICTED: RCC1 domain-containing protein 1-like [Rattus
norvegicus]
Length = 330
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 44/193 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL E+G++ +WG G+HG+ E P EA + +
Sbjct: 169 GAEHALLLCEAGQVFSWGG-----------GRHGQLGHGSLEAELEPRLLEALQGLRMAE 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E G++Y WGW E A TR + ++++T
Sbjct: 218 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELN----------D 267
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLNPGVKITKVAAGGRHTLI 226
D GEE +A + PA F + P L+ L G K + G RHT +
Sbjct: 268 DGLRGEE--------AALADVGAPA---HFIAIQPFPALLDLPLGSDAVKASCGSRHTAV 316
Query: 227 LSDMGQVWGWGYG 239
++ G+++ WG+G
Sbjct: 317 VTRTGELYTWGWG 329
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FGSA 146
+G+H P PL V + +A W++ VT G V G C +A RD + S
Sbjct: 25 NGQHA-VHSPEPLHAADDVCQVSASWSYTALVTRGGRVELSGSVSC--AADGCRDVWASE 81
Query: 147 GSF--QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN-PASGDEFFTLS- 202
G Q++ +G + L + P GE + + S A+ + E+ P S TL
Sbjct: 82 GLLVVQRNKSGSGTEL--QAWVPGSALQGEPLWVQNLASGAKAQGEDEPGSEPRMGTLPL 139
Query: 203 -PCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P +++ ++ G H L+L + GQV+ WG G GQLG GS +
Sbjct: 140 LPCARAYMTPQPPFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGS-L 198
Query: 251 KMVPTPHLIPCLE 263
+ P L+ L+
Sbjct: 199 EAELEPRLLEALQ 211
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
L P L+ G+++ +VAAGG H++ +S+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR 250
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 96 EPFP----LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+PFP LP + VKA+ G H VT GE+YTWGW E
Sbjct: 290 QPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGE 330
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 36/231 (15%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
++ G S G +A G + +WG + +L G + P +
Sbjct: 29 KVVAGTSGYIAVSAGNTTTIALKNDGTVWSWGFNQN---GHLGDGTTSNSNSPVQVKGLN 85
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+ +AGWAH V++ G V+TWG G +G + ++L T
Sbjct: 86 GITAISAGWAHFVALKSDGTVWTWG-------------VGYSGELGDGT----NSLRTTP 128
Query: 165 APPSDKRAGEEV---------VKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPG-V 212
AP + + +K T S + + +G+ + P V PG +
Sbjct: 129 APINGLTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQV---PGQI 185
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
IT +++GG H+L++ + G VW WG GQLG G+ PTPH I L
Sbjct: 186 GITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNN-PTPHQISGLN 235
>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
magnipapillata]
Length = 441
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 78/198 (39%), Gaps = 56/198 (28%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAGW 113
CGG + SE G++ +WG DD T G GE P LP VV A+AG
Sbjct: 79 CGGM--HTIGVSEHGEVYSWGCNDDGALGRPTEGTDGEEFIPRKVLLPQGIRVVYASAGD 136
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
+H ++T+ G V+ WG RD S GK++
Sbjct: 137 SHSAALTDDGRVFAWG---------AYRDASGQIGLTAASIGKKN--------------- 172
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
EV+ K ++ ++PA KV +G HT+IL+ G +
Sbjct: 173 -EVI---KIYPKGDQIDDPA---------------------VKVVSGNDHTVILTSEGLI 207
Query: 234 WGWGYGGEGQLGLGSRIK 251
+ G G +GQLG RIK
Sbjct: 208 YTSGTGEQGQLG---RIK 222
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 76/212 (35%), Gaps = 57/212 (26%)
Query: 65 ATSESGKLITWGSADD-EGQSYLTS---GKHGETPEPFPLPTEAS--VVKAAAGWAHCVS 118
A ++ G++ WG+ D GQ LT+ GK E + +P + VK +G H V
Sbjct: 141 ALTDDGRVFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQIDDPAVKVVSGNDHTVI 200
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+T G +YT G E ++ FG G R G E++
Sbjct: 201 LTSEGLIYTSGTGEQGQLGRIKECFGHRGG----------------------RRGLEII- 237
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWG 237
LSP +V + + AG T LS D V+ WG
Sbjct: 238 ----------------------LSPQVVRFRKKQFFSDIFAGSFCTFALSRDTNDVYAWG 275
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCL----EHA 265
GQLG G+ P +I L EHA
Sbjct: 276 LNNYGQLGSGTTENFF-NPEVIQSLSEIREHA 306
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 72/193 (37%), Gaps = 65/193 (33%)
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
+ ++ G H + V+E GEVY+WG C D G+ G
Sbjct: 72 VNFIQVTCGGMHTIGVSEHGEVYSWG---C-------NDDGALGR--------------- 106
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
P++ GEE + R+ V L G+++ +AG H
Sbjct: 107 ---PTEGTDGEEFIPRK-------------------------VLLPQGIRVVYASAGDSH 138
Query: 224 TLILSDMGQVWGWG--YGGEGQLGL--------GSRIKMVPTPHLI--PCLEHAASGKDR 271
+ L+D G+V+ WG GQ+GL IK+ P I P ++ +
Sbjct: 139 SAALTDDGRVFAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGDQIDDPAVKVVSGNDHT 198
Query: 272 PLLVRQGSVNSSG 284
+L +G + +SG
Sbjct: 199 VILTSEGLIYTSG 211
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
RL G D K CG F+LA S G + TWG D + S +H P+ E
Sbjct: 670 RLSGQDVVKIECGAQ--FSLALSRCGLVWTWGKGDYFRLGH-GSDQHVRRPQVVEGLREH 726
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWG 129
VV A G HC++VTE G+V+ WG
Sbjct: 727 KVVDVAVGALHCLAVTEGGQVFAWG 751
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K + CG F+LA S++G + TWG D + S +H P+ VV+ +
Sbjct: 1656 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH-GSDEHVRRPKLIESLRGMKVVEVS 1714
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G HC++ + G+VYTWG
Sbjct: 1715 VGSLHCIAAVDNGDVYTWG 1733
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P L+ V IT+V+ AGG+H L LS+ G+V+ WG G +G+LG G+R + P +I
Sbjct: 1483 PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSL-DHPRIIE 1541
Query: 261 CL 262
L
Sbjct: 1542 SL 1543
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 25/93 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GGRH + L+ G V+ WG G EG+LG GSR + TP I
Sbjct: 516 IKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL-TPRKIETFPEKC----- 569
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+++I+CG HSA +
Sbjct: 570 -------------------IRDISCGSSHSAAI 583
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 117/328 (35%), Gaps = 71/328 (21%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G + G+ + +L P P + K G A+A + G + +WG + EG+
Sbjct: 498 GPVTGSVSRLTQVLFPQPIK-------KLAVHSGGRHAMALTYDGHVYSWGDGE-EGKLG 549
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
S TP E + + G +H ++ +G +YTWG
Sbjct: 550 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWG---------------- 593
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGDEFF 199
G + + G L + P +G++VV + +T ++ + GD F
Sbjct: 594 HGMYGRLGHGNNHTLL--KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDF 651
Query: 200 ----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P V G + K+ G + +L LS G VW WG G +LG GS
Sbjct: 652 GKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSD 711
Query: 250 IKMVPTPHLIPCL-EH----AASGKDRPLLVRQGSV------NSSGKAGRS--------- 289
+ V P ++ L EH A G L V +G N G+ G
Sbjct: 712 -QHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPM 770
Query: 290 --------YVKEIACGGRHSAVVTDMSY 309
+ ++ACG HS D S+
Sbjct: 771 KVQGLEGVKITKLACGSSHSIAFADTSH 798
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+K+ +V+ G H + D G V+ WG EGQ+G G+ + P L+ L
Sbjct: 1699 PKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGT-TQATQIPRLVAAL 1757
Query: 263 E 263
+
Sbjct: 1758 Q 1758
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
RL G D K CG F+LA S G + TWG D + S +H P+ E
Sbjct: 669 RLSGQDVVKIECGAQ--FSLALSRCGLVWTWGKGDYFRLGH-GSDQHVRRPQVVEGLREH 725
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWG 129
VV A G HC++VTE G+V+ WG
Sbjct: 726 KVVDVAVGALHCLAVTEGGQVFAWG 750
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K + CG F+LA S++G + TWG D + S +H P+ VV+ +
Sbjct: 1655 KHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGH-GSDEHVRRPKLIESLRGMKVVEVS 1713
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G HC++ + G+VYTWG
Sbjct: 1714 VGSLHCIAAVDNGDVYTWG 1732
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P L+ V IT+V+ AGG+H L LS+ G+V+ WG G +G+LG G+R + P +I
Sbjct: 1482 PTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSL-DHPRIIE 1540
Query: 261 CL 262
L
Sbjct: 1541 SL 1542
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 25/93 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GGRH + L+ G V+ WG G EG+LG GSR + TP I
Sbjct: 515 IKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADAL-TPRKIETFPEKC----- 568
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+++I+CG HSA +
Sbjct: 569 -------------------IRDISCGSSHSAAI 582
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 117/328 (35%), Gaps = 71/328 (21%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G + G+ + +L P P + K G A+A + G + +WG + EG+
Sbjct: 497 GPVTGSVSRLTQVLFPQPIK-------KLAVHSGGRHAMALTYDGHVYSWGDGE-EGKLG 548
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
S TP E + + G +H ++ +G +YTWG
Sbjct: 549 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWG---------------- 592
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGDEFF 199
G + + G L + P +G++VV + +T ++ + GD F
Sbjct: 593 HGMYGRLGHGNNHTLL--KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDF 650
Query: 200 ----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P V G + K+ G + +L LS G VW WG G +LG GS
Sbjct: 651 GKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSD 710
Query: 250 IKMVPTPHLIPCL-EH----AASGKDRPLLVRQGSV------NSSGKAGRS--------- 289
+ V P ++ L EH A G L V +G N G+ G
Sbjct: 711 -QHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPM 769
Query: 290 --------YVKEIACGGRHSAVVTDMSY 309
+ ++ACG HS D S+
Sbjct: 770 KVQGLEGVKITKLACGSSHSIAFADTSH 797
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ G+K+ +V+ G H + D G V+ WG EGQ+G G+ + P L+ L
Sbjct: 1698 PKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGT-TQATQIPRLVAAL 1756
Query: 263 E 263
+
Sbjct: 1757 Q 1757
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 82/203 (40%), Gaps = 31/203 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK-HGETPEPFPLPTEASV--VKAAAGWAH 115
GC ++A + SG L WG D L GK H EP P+ + V + +AG AH
Sbjct: 148 GCNHSMALTISGHLFCWG---DNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAH 204
Query: 116 CVSVTEAGEVYTWGWREC----------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
+++ +G ++ WG E P + + S G K +A+ T
Sbjct: 205 SFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDG 264
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
G TS + N +P V G +T++A G HTL
Sbjct: 265 GVFTFGCG--------TSGQLGHNSN------HHEYTPRKVFELMGSVVTQIACGRAHTL 310
Query: 226 IL-SDMGQVWGWGYGGEGQLGLG 247
L G+V+ +G GG+GQLGLG
Sbjct: 311 ALVPSSGRVYTFGRGGDGQLGLG 333
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 96/251 (38%), Gaps = 86/251 (34%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSG---KHGETPEPFPLPTEASVVKAAAGWA 114
CG A +A S+ G + WG + GQ L S K P+ + SVV+ A G
Sbjct: 92 CGKAHTVAVSDQGLVFAWGD-NSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCN 150
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++T +G ++ WG S+G GK + +E AP
Sbjct: 151 HSMALTISGHLFCWG-------------DNSSGQL---GIGKTHSSMSEPAP-------- 186
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+++LN GV ++AGG H+ LS G ++
Sbjct: 187 ------------------------------VLSLN-GVPFMLISAGGAHSFALSSSGALF 215
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
GWG GQLG+ H + DRPL S+ S G V +
Sbjct: 216 GWGKNEYGQLGV-----------------HDTT--DRPLPTLLKSLRSQG------VCYV 250
Query: 295 ACGGRHSAVVT 305
+CG +H+AV+T
Sbjct: 251 SCGEKHTAVLT 261
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 26/94 (27%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI--KMVPTPHLIPCLEHAASGKDR 271
ITKV G HT+ +SD G V+ WG GQ+GLGS++ K+ P ++ L
Sbjct: 87 ITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGL--------- 137
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ V +IACG HS +T
Sbjct: 138 ---------------AKMSVVQIACGCNHSMALT 156
>gi|428175673|gb|EKX44562.1| hypothetical protein GUITHDRAFT_49614, partial [Guillardia theta
CCMP2712]
Length = 311
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 113/310 (36%), Gaps = 80/310 (25%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCV 117
LA SESG+++ WG + +P LP + V K A H +
Sbjct: 11 LAVSESGEVMAWGDNALGRLGLAAAAAAARSPSKVFLPVPVAGLRGIVVSKVACSDQHSL 70
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++T+ GEV WG C +G G K + + LP P +
Sbjct: 71 ALTDDGEVLAWG---CAA-------YGVLGIADVSKLAVDAELNLPFSPTPRKVEGLHGP 120
Query: 176 VVKRRKT--SSAREESENPASGDEFFT------------------------------LSP 203
+++ R T S R + + G F+ +P
Sbjct: 121 LLRHRVTDISCGRHFNVAASEGGRVFSWGSASLGCLGVGETSALPSSNMNRSRSRWSATP 180
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP---HLI- 259
L+ G KI +++ G HTL LS+ G+VW WG G+LG+G + +P H+
Sbjct: 181 LLLEGLKGQKICRISCGVSHTLALSEGGEVWAWGSAEYGKLGVGD-VSSLPADAEGHVFS 239
Query: 260 PCLEHAASGKDRPLLV-RQGSVNSSGKA-----------------------GRSYVKEIA 295
P H ++G + V RQG V + G A GR V ++A
Sbjct: 240 PIPLHVSAGSSHSMAVTRQGIVYAWGSAEHGKLGQGENKQQQQQHFDRLCRGR-LVDQVA 298
Query: 296 CGGRHSAVVT 305
CG HS T
Sbjct: 299 CGEFHSMAAT 308
>gi|403353979|gb|EJY76535.1| hypothetical protein OXYTRI_01950 [Oxytricha trifallax]
Length = 761
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 94/242 (38%), Gaps = 49/242 (20%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TE 103
L G K VCGG AL S +G++ TWG +DEG G+ G+ P + +
Sbjct: 39 LVGNKILKIVCGGMHTVAL--SSAGRVYTWG-CNDEG----ALGRPGQENTPIEVADTMK 91
Query: 104 ASVVKAAAGWAHCVSVTEA-GEVYTWGW-------RECVPSAKVTR------DFGSAGSF 149
+ AG H V+ + +V+ WG R P + TR + +
Sbjct: 92 IPITDITAGDCHTVAYNQNLNQVFLWGLYRNAMTGRTYEPVKEPTRIGQELFNKQTKNFI 151
Query: 150 QKDSTGKQS--ALPTEQ-----APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
QK +G AL T+ P + G + R K A + A
Sbjct: 152 QKIKSGSHHTLALTTDGEVYGWGDPESGKIGRMLKTRNKNEQALRIEKIHAK-------- 203
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
K+ V G H+ ++D GQV+ WG GQLG+G + + TP IP L
Sbjct: 204 ----------KVRDVFCGNHHSFYVNDKGQVYSWGLNNHGQLGIGHK-ENTATPTHIPEL 252
Query: 263 EH 264
++
Sbjct: 253 DN 254
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 58/218 (26%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
++K G H V+++ AG VYTWG C D G+ G +++T + A T +
Sbjct: 44 ILKIVCGGMHTVALSSAGRVYTWG---C-------NDEGALGRPGQENTPIEVA-DTMKI 92
Query: 166 PPSDKRAGE----------------EVVKRRKTSSAREESENPAS-GDEFFTLSPCLVTL 208
P +D AG+ + + T E + P G E F T
Sbjct: 93 PITDITAGDCHTVAYNQNLNQVFLWGLYRNAMTGRTYEPVKEPTRIGQELFNKQ----TK 148
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N I K+ +G HTL L+ G+V+GWG G++G +M+ T +
Sbjct: 149 NF---IQKIKSGSHHTLALTTDGEVYGWGDPESGKIG-----RMLKT----------RNK 190
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
++ L + K V+++ CG HS V D
Sbjct: 191 NEQALRIE--------KIHAKKVRDVFCGNHHSFYVND 220
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 53 KDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+DV CG F + ++ G++ +WG ++ GQ + ++ TP P V A
Sbjct: 206 RDVFCGNHHSFYV--NDKGQVYSWG-LNNHGQLGIGHKENTATPTHIPELDNQHVSVIAG 262
Query: 112 GWAHCVSVTEAGEVYTWG 129
G H ++VT G+VY WG
Sbjct: 263 GEHHSIAVTAEGKVYCWG 280
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 109/268 (40%), Gaps = 46/268 (17%)
Query: 18 KETVVYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESG 70
K+ VY WG G TS ++ P L I A L G D CGG ++ A S +G
Sbjct: 532 KDYEVYSWGNGDGGRLGHGDTSTKEEPTL--IQA-LKGKDIIDVECGGT--YSAAISANG 586
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG--WAHCVSVTEAGEVYTW 128
L TWG + G+ + + TP ++ ++K A G +AH + +T G+VY+W
Sbjct: 587 ALYTWGRGN-YGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSW 645
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G D+G G D S LP + + + + + + E+
Sbjct: 646 G----------DGDYGKLGRGGSDG----SKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 189 SE-------------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+P + F P +V + K+ V+ G H L L+D G+V+G
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRF---PEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYG 748
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
WG Q+ S + V P LI L+
Sbjct: 749 WGKNENKQICDSSEL-FVQQPRLIEALK 775
>gi|405975788|gb|EKC40334.1| Alsin [Crassostrea gigas]
Length = 1341
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 95/248 (38%), Gaps = 60/248 (24%)
Query: 18 KETVVYMW-GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
K+ ++YMW GY K P L IP R G ++ + G+L + G
Sbjct: 45 KDGLLYMWQGYHGDVEVVKFPALFGIPIR---------KVAIGTDHSVFLTLDGRLFSCG 95
Query: 77 SADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
S + GQ + +G + +P + ++ + A G H +V+ G+VY WG
Sbjct: 96 S-NVHGQLGVITGDKDQAYDPVQVSGLSDVQIKDVACGCNHSAAVSRLGQVYCWG----- 149
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
+ FQ ST K +P Q P RE S++
Sbjct: 150 ----------DSREFQCASTEKTVTVP--QLVPV----------------HRETSDHCQH 181
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G V + V I +V+ G HT+ LS +VW WG G GLG + K
Sbjct: 182 G----------VPIEDQVDIVEVSCGKSHTVALSGAREVWVWGSGE----GLGIKQKYTA 227
Query: 255 TPHLIPCL 262
+P L+ L
Sbjct: 228 SPVLLERL 235
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
GDE P +V + G K+ KV GG H+L L+ +V+ WG GQL
Sbjct: 597 GDEIDRERPEVVRMLIGTKVVKVCGGGFHSLALTADSKVYSWGLNASGQLA 647
>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
Length = 1679
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 93/246 (37%), Gaps = 33/246 (13%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
++ WG G +P IP ++ ++WK G G +A G L WG
Sbjct: 40 LWTWGNNDEGQLGNSTPAAINIPTKMGTANNWK-TAAAGWGHTVALKTDGTLWAWGYGR- 97
Query: 81 EGQSYLTSGKHGETPEPFPLP----TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
L +G F LP TE AAG H V++ G ++ WG
Sbjct: 98 -----LGQLGNGNYNTNFNLPQQIGTENDWQTIAAGHGHTVALKNDGTLWAWG------- 145
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSAREESENP 192
+ G+ SF +++ PT+ S+ A G + +K + +N
Sbjct: 146 NNFSGQLGNGTSFDRNT-------PTKIGSDSNWLAISAGGLYTIALKKDGTLWAWGKNT 198
Query: 193 AS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
GD T + + +AAG HT+ + + G +W WG G LG + I
Sbjct: 199 YGTLGDGTTTNNRVPKQIGTDTDWKTIAAGSDHTIAIKNDGSLWIWGKNTYGALGDNTTI 258
Query: 251 -KMVPT 255
K+VPT
Sbjct: 259 DKIVPT 264
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 33/224 (14%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP--L 100
P ++ +W + GG + +A + G L WG +Y T G T P +
Sbjct: 163 PTKIGSDSNWLAISAGGL-YTIALKKDGTLWAWGK-----NTYGTLGDGTTTNNRVPKQI 216
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
T+ AAG H +++ G ++ WG +G+ G D+T +
Sbjct: 217 GTDTDWKTIAAGSDHTIAIKNDGSLWIWG----------KNTYGALG----DNTTIDKIV 262
Query: 161 PTEQAPPSDKRAGEE------VVKRRKTSSAREESENP--ASGDEFFTLSPCLVTLNPGV 212
PT+ +D ++ E +K T A + + +G + +L P +
Sbjct: 263 PTKIGTDTDWKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGNGSKINSLIPVQIGTEKNW 322
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
++ V+ G HT+ + +W WG GQLG G+ I K +PT
Sbjct: 323 QM--VSGGSVHTVAVKTDESLWSWGNNSYGQLGDGTSIEKNIPT 364
Score = 44.7 bits (104), Expect = 0.051, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P ++ + W+ + G G +A G L WG+ + GQ L +G + P +
Sbjct: 112 LPQQIGTENDWQTIAAGH-GHTVALKNDGTLWAWGN-NFSGQ--LGNGTSFDRNTPTKIG 167
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
++++ + +AG + +++ + G ++ WG +G+ G D T + +P
Sbjct: 168 SDSNWLAISAGGLYTIALKKDGTLWAWG----------KNTYGTLG----DGTTTNNRVP 213
Query: 162 TEQAPPSDKR---AGEE---VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+ +D + AG + +K + ++ A GD T +V G
Sbjct: 214 KQIGTDTDWKTIAAGSDHTIAIKNDGSLWIWGKNTYGALGDN--TTIDKIVPTKIGTDTD 271
Query: 216 -KVAAGG-RHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVP 254
K A GG +T+ + G +W WGY +G G GS+I ++P
Sbjct: 272 WKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGNGSKINSLIP 313
>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 883
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 32/207 (15%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
A + SG+L WG + GQ L G+ TP+ + + +AG AH ++++
Sbjct: 85 ARTPSGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSM 141
Query: 122 AGEVYTWGWREC------VPSAKVTRDFGSAGSFQKDST----GKQSALPTEQAPPSDKR 171
+G +Y+WG E +K + A QK G SAL T+
Sbjct: 142 SGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFG 201
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL-ILSDM 230
AG K + ++E L PCLV G ++T++A G HTL +SD
Sbjct: 202 AG----KHGQLGHNSTQNE----------LRPCLVAELVGNRVTQIACGRWHTLAYVSDF 247
Query: 231 GQVWGWGYGGEGQLGLGSRI-KMVPTP 256
G+V+ +G G +GQLG G + +++P P
Sbjct: 248 GKVFSFGSGKDGQLGNGGTLDQLIPLP 274
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 112 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 159
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ V+ +ACGG HSA++T
Sbjct: 160 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLT 192
>gi|336367150|gb|EGN95495.1| hypothetical protein SERLA73DRAFT_186528 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379869|gb|EGO21023.1| hypothetical protein SERLADRAFT_475639 [Serpula lacrymans var.
lacrymans S7.9]
Length = 609
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 87/225 (38%), Gaps = 49/225 (21%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD--------STGKQ 157
V AAG H +++T G Y P K G G + D
Sbjct: 254 FVSIAAGRDHLLALTSTGRTY------AHPINKNANSHGQLGFRKFDIPIPSSSTVMSPS 307
Query: 158 SALPTEQAPPS--DKRAGEEVVKRRKTSSA---------REESENPASGDEFFTLSPCLV 206
S L E P S D A R T SA + + +N D F +
Sbjct: 308 SRLAVELVPKSIADPFANSTPFSRADTPSAGPTVSDNLQQLDDQNIGFSDTLFEIQAL-- 365
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM----VPTPHLI--- 259
G+ ++++AAGGR + +L+D G+ GWG GQ+GLGS + + VPT ++
Sbjct: 366 ---KGINVSQIAAGGRSSYVLTDSGRALGWGANEFGQVGLGSNVTLDTITVPTEIVLSRN 422
Query: 260 -------PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
CL+ AA G D V + SG ++V + CG
Sbjct: 423 VPGSLRTSCLDIAAGG-DLACFVAE----RSGGNTAAFVDLLMCG 462
>gi|332017444|gb|EGI58167.1| RCC1 and BTB domain-containing protein 1 [Acromyrmex echinatior]
Length = 550
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 37/251 (14%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
+K L P + G K G LA ++ G++ +WG ++ GQ K
Sbjct: 60 DKDATLEPQKVEVLCGKDIKTFAYGNGPHVLALTKEGEVYSWG-FNNRGQLAQRVNKKS- 117
Query: 94 TPEPFPLPTEAS------------VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTR 141
+ + +PT ++ A G H V++TE GEVY G
Sbjct: 118 SLQVISIPTLVQLRTPEGSLGMKRIMNIACGSNHSVAITEDGEVYICG----------DN 167
Query: 142 DFGSAGSFQKDSTGKQSAL-PTEQAPPSDKRAGEEV-VKRRKTSSAREESENPASGDEFF 199
+ G+ +S + P SD++ V T + E G+ F
Sbjct: 168 RYNQLGNVYFNSPDNEYLFRPQLVNDNSDRKKIVHVSCGGAFTMAITTSYEVYGWGNNSF 227
Query: 200 -----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+P V L G+ + KV G HTL L++ +++ WG +GQLG+GS
Sbjct: 228 GQLGIRENCETKYTPQRVDLKEGLAVVKVVCGIEHTLALTNEKKIYAWGRNDDGQLGIGS 287
Query: 249 RIKMVPTPHLI 259
+ P +I
Sbjct: 288 KEFTFRRPIMI 298
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 19/171 (11%)
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++T+ GEVY+WG+ ++ + S Q S L T + KR
Sbjct: 88 HVLALTKEGEVYSWGFNN---RGQLAQRVNKKSSLQVISIPTLVQLRTPEGSLGMKRIMN 144
Query: 175 EVVKRRKTSSAREESENPASGDEFFT---------------LSPCLVTLNPG-VKITKVA 218
+ + E+ E GD + P LV N KI V+
Sbjct: 145 IACGSNHSVAITEDGEVYICGDNRYNQLGNVYFNSPDNEYLFRPQLVNDNSDRKKIVHVS 204
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
GG T+ ++ +V+GWG GQLG+ + TP + E A K
Sbjct: 205 CGGAFTMAITTSYEVYGWGNNSFGQLGIRENCETKYTPQRVDLKEGLAVVK 255
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD+ TL P V + G I A G G H L L+ G+V+ WG+ GQ L R+
Sbjct: 59 GDKDATLEPQKVEVLCGKDIKTFAYGNGPHVLALTKEGEVYSWGFNNRGQ--LAQRVNKK 116
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ +I P LV+ + G G + IACG HS +T+
Sbjct: 117 SSLQVISI----------PTLVQLRT--PEGSLGMKRIMNIACGSNHSVAITE 157
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 129/356 (36%), Gaps = 73/356 (20%)
Query: 18 KETVVYMWG-YLPGTSPEKSP------ILSPIPARLCGGDSWKDVCGGGCG--FALATSE 68
KE VY+WG L ++S P+ + G K + CG +LA +
Sbjct: 188 KEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQI---DCGDFHSLALDD 244
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
+G L +WG + +G+ + ETP+ + + AG H +++T +VY W
Sbjct: 245 NGTLYSWGVGE-KGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAW 303
Query: 129 G---WREC---------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR-AGEE 175
G + +C +P G+ S+ DS +Q L + PP K+ A E
Sbjct: 304 GDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSV-QQEILEFFKDPPKIKQIAAGE 362
Query: 176 VVKRRKTSSAREES----------ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ TSS + S N P LV K +VAAG H+L
Sbjct: 363 MHTLVLTSSGQIFSFGYNQQGQLGHNTVDN----YCRPKLVEGMLNHKTVQVAAGRNHSL 418
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL----------------------- 262
L++ V+ G GQ GL R H++ L
Sbjct: 419 CLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVLSLLSVNSFKLYAGGFHSWVVLDEMMP 478
Query: 263 ---EHAAS---GKDRPLLVRQGSVNSSGKAGRSYVKE---IACGGRHSAVVTDMSY 309
E A G D LL Q N+ AG+SY+ +HS V ++Y
Sbjct: 479 KKDEFQALKGPGSDDSLLNSQDGENNYDMAGKSYISNSNFFHDQMKHSKYVVQLNY 534
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 126/318 (39%), Gaps = 50/318 (15%)
Query: 14 MEECKETVVYMWGYLPGTSPE-----KSPILSPIPARLCGGDSWKDVC--GGGCGFALAT 66
+++ K+ Y+W + T E + +L +P R+ G K + GG L T
Sbjct: 76 LDQIKKYHAYVWSFGQNTKGELGTGHYNEVL--MPERVRGLPKLKVIFLSSGGKHSGLVT 133
Query: 67 SESGKLITWGSA--DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
E GKL GS D G +T+G +T +P L T+ + + A G H +++++ G+
Sbjct: 134 -EDGKLWMCGSNLHDKLGLEGITTGSK-KTFKPVELLTQIFIKQVACGDYHTLALSKEGQ 191
Query: 125 VYTWG----------WRECVPSAK----VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
VY WG +E +AK + + F Q D S +
Sbjct: 192 VYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSW 251
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
GE K E+ E P + G IT++ AG HTL ++
Sbjct: 252 GVGE---KGECGHGKFEDQETPQR-----------IKFFDGKIITQIEAGNHHTLAITAD 297
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLL---VRQGSVNSSGKAG 287
QV+ WG G GQ G G + P L+ + G + L V+Q +
Sbjct: 298 NQVYAWGDGRYGQCGFGE-FENTAIPQLV---NFPSQGNNTSYLDDSVQQEILEFFKDPP 353
Query: 288 RSYVKEIACGGRHSAVVT 305
+ +K+IA G H+ V+T
Sbjct: 354 K--IKQIAAGEMHTLVLT 369
>gi|428184753|gb|EKX53607.1| hypothetical protein GUITHDRAFT_160884 [Guillardia theta CCMP2712]
Length = 308
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 62/222 (27%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P + PI P+ CG F + +ESGK+ + G + +G
Sbjct: 128 PTEIPIPEPVIDVSCGKK-----------FTVFVTESGKVYSMGDNKNGELGNPNAGSSS 176
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW-RECVPSAKVTRDFGSAGSFQK 151
P +VK AAG H +++++ GEVY+WGW P A V G+ G
Sbjct: 177 YEPTIVHGLDGIKIVKIAAGQYHVLALSDIGEVYSWGWGGSGTPGAGV----GALGH--- 229
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
G +++LP + R E N G
Sbjct: 230 ---GDKASLPVPK---------------------RIERLN-------------------G 246
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
KIT ++ G +H++ LS G ++ WG+G +G+LG G+ +
Sbjct: 247 EKITNISCGAKHSVALSQDGTMFTWGHGEQGRLGHGNNTDFL 288
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 28/218 (12%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP E +V + G H +++T +G VY+WGW D QK + +Q
Sbjct: 46 LPDE-DIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGH--GDLKIINEPQKIAFFEQER 102
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG--DEFFTLSPCLVTLNP------G 211
L + S V + T ES G E+ L P G
Sbjct: 103 LEVDYI--SCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAG 160
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
I KV+ GG HT L+ G+V+ WG G GQLG+GS P + G R
Sbjct: 161 ETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPE-------NESLMGASR 213
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSY 309
P L++ + N V ++ACG HSA VT+ +
Sbjct: 214 PHLLK--AFNG------EKVVQVACGAFHSAAVTEQGH 243
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 119/344 (34%), Gaps = 113/344 (32%)
Query: 18 KETVVYMWGY-------LPG---TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATS 67
K+ +Y+WG LP + E P+ P+P G K CGG AL +
Sbjct: 120 KDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSF 179
Query: 68 ESGKLITWGSADD-------------EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
G++ WG D E +S + + + P VV+ A G
Sbjct: 180 --GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASR----PHLLKAFNGEKVVQVACGAF 233
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +VTE G VY WG D+G G Q +
Sbjct: 234 HSAAVTEQGHVYVWG----------KEDYGMLGVGQSSD--------------------Q 263
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
++ KR E+F P L +V+ GG HT++++ G +
Sbjct: 264 QIPKRL----------------EYFDDIPVL----------RVSCGGWHTVVVAKSGDCY 297
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLV-RQGSVNSSGK--- 285
+G G G+LGLG K PHL+ L+ AA G L V G+ +G+
Sbjct: 298 AFGRGEYGRLGLGD-TKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDH 356
Query: 286 ------------------AGRSYVKEIACGGRHSAVVTDMSYPI 311
G V++ + GG HS + S PI
Sbjct: 357 GRLGLADMKALGVPTRLDLGPIPVRQFSAGGAHSVALMHSSRPI 400
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 36/231 (15%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA 104
++ G S G +A G + +WG + +L G + P +
Sbjct: 29 KVVAGTSGYIAVSAGNTTTIALKNDGTVWSWGFNQN---GHLGDGTTSNSNSPVQVKGLN 85
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+ +AGWAH V++ G V+TWG G +G + ++L T
Sbjct: 86 GITAISAGWAHFVALKSDGTVWTWG-------------VGYSGELGDGT----NSLRTTP 128
Query: 165 APPSDKRAGEEV---------VKRRKT--SSAREESENPASGDEFFTLSPCLVTLNPG-V 212
AP + + +K T S + + +G+ + P V PG +
Sbjct: 129 APINGLTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQV---PGQI 185
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
IT +++GG H+L++ + G VW WG GQLG G+ PTPH I L
Sbjct: 186 GITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNN-PTPHQISGLN 235
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 98/242 (40%), Gaps = 36/242 (14%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-----VVKAAAGWAHCVSV 119
A + SG ++ WG +D GQ L G TP P S V AAG H ++
Sbjct: 67 ALTGSGGVMCWG-GNDFGQ--LGDG----TPTTRSTPGAVSGLPSGVTAIAAGNYHTCAL 119
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T +G V WG A + G+ +F + + G S LP+ + G+
Sbjct: 120 TGSGGVRCWG-------ANYSGQLGNGLTFGRSTPGAVSGLPS--GVTAIAAGGDHTCAL 170
Query: 180 RKTSSAREESENPAS--GDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ +N GD T +P V+ P +T +AAGG HT L+ G+VW
Sbjct: 171 MSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLP-SGVTAIAAGGLHTCALTGSGEVWC 229
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AASGKDRPLLVRQGSV-----NSSGK 285
WGY GQLG G+ TP + L AA G L+ G V N SG+
Sbjct: 230 WGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQ 289
Query: 286 AG 287
G
Sbjct: 290 LG 291
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 109/266 (40%), Gaps = 32/266 (12%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WGY L G + + P + G S V G A + SG + WG A+
Sbjct: 534 VWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWG-ANF 592
Query: 81 EGQSYLTSGKHGETPEPFP-LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
+GQ + + TP LP+ + + AA GW H ++T +GEV+ WG
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLPSGVTAI-AAGGW-HTCALTSSGEVWCWG-------DNY 643
Query: 140 TRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF 199
G + + + G S LP+ + AG E T + E GD ++
Sbjct: 644 YGQLGDGTTTNRSTPGAVSGLPSGVTAIA---AGWE-----HTCALTSSGEVWCWGDNYY 695
Query: 200 TLSPCLVTLN---PGV------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
T N PG +T +AAG HT L+ G V WG G+GQLG G R
Sbjct: 696 GQLGDGTTTNRSTPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDG-RP 754
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVR 276
TP + + A+ G P+++R
Sbjct: 755 LYRTTP--VDVVTSASWGVYLPMIIR 778
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 89/236 (37%), Gaps = 25/236 (10%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA-AAGWAHCVSVTEAG 123
A SG + WG +D GQ L G ++ P + S V A AAG H ++T +G
Sbjct: 272 ALMSSGGVWCWGR-NDSGQ--LGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSG 328
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT--EQAPPSDKRAGEEVVKRRK 181
EV+ WG G + + + S LP+ E D +
Sbjct: 329 EVWCWG-------GNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGV 381
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
R S G +P V+ P +T +AAGG HT L G VW WG
Sbjct: 382 WCWGRNNSGQLGDGTTTARSTPAAVSGLP-SGVTAIAAGGLHTCALMSSGGVWCWGLNNS 440
Query: 242 GQLGLGSRIKMVPTPHLIPCLEH-----AASGKDRPLLVRQGSV-----NSSGKAG 287
GQLG GS TP + L AA G L G V N+SG+ G
Sbjct: 441 GQLGDGSDTDS-STPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLG 495
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R S G + ++P V+ P +T +AAG HT L+ G VW WGY GQLG
Sbjct: 488 RNNSGQLGDGSTIYHITPVAVSGLP-SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLG 546
Query: 246 LGS 248
G+
Sbjct: 547 DGT 549
>gi|327292499|ref|XP_003230948.1| ran exchange factor Prp20/Pim1 [Trichophyton rubrum CBS 118892]
gi|326466885|gb|EGD92338.1| ran exchange factor Prp20/Pim1 [Trichophyton rubrum CBS 118892]
Length = 565
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 38/183 (20%)
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P + VV+ AAG HCV++T G V TWG + Q AL
Sbjct: 180 PEDVGVVQVAAGGMHCVALTHDGRVLTWGVND------------------------QGAL 215
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV---TLNPGVKITKV 217
+ + ++ + S + NP + +P + G I +V
Sbjct: 216 GRDTTWEGGLKDIDDAKSDDSSDSGSDSGLNP------YESTPTAIPSDAFPEGTVIVQV 269
Query: 218 AAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRP 272
AAG + L+D G V+GWG G EG +G + K+ TP LI L+ H A G +
Sbjct: 270 AAGDSSSFALTDDGLVYGWGTFRGNEGIIGFDADTKIQTTPKLISGLKKIIHVACGDNHA 329
Query: 273 LLV 275
L +
Sbjct: 330 LAI 332
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 74/207 (35%), Gaps = 60/207 (28%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPT----- 102
K++ GCG + A +SGK+ WG SY +G G+ PT
Sbjct: 371 KNIIHVGCGSFHSFAVHKSGKVYGWGL-----NSYCETGIQQGAGDDEAVILHPTVVDSL 425
Query: 103 -EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+ ++V+ G H ++ T G+ WG + G QS L
Sbjct: 426 KDKNIVQICGGSHHTLARTIDGDCLVWGRLD----------------------GFQSGLK 463
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ P E V + + AR P V PG K VAAG
Sbjct: 464 VDTLP-------ESAVIKDDRNRAR------------VLFEPTAV---PGFKAEYVAAGA 501
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGS 248
H++ + + G+ W WG+ Q G G+
Sbjct: 502 DHSIAIDNEGRAWTWGFSANYQTGQGT 528
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 21 VVYMWGYLPGTSP----EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
+VY WG G + + P + G K + CG ALA G +
Sbjct: 284 LVYGWGTFRGNEGIIGFDADTKIQTTPKLISG---LKKIIHVACGDNHALAIDNRGAVFA 340
Query: 75 WGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WGS G+ + K +G P F LP +++ G H +V ++G+VY WG
Sbjct: 341 WGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NIIHVGCGSFHSFAVHKSGKVYGWG 396
>gi|58271668|ref|XP_572990.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229249|gb|AAW45683.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 518
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 91/236 (38%), Gaps = 59/236 (25%)
Query: 23 YMWGYLP------GTSPEKSPI-LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
Y++G P G E +P+ +SP G W + G F L S W
Sbjct: 75 YLFGRPPAMVQSNGVISENTPLKISPSSVGSPKGTKWVNGAAGRSHFLLVDSNGD---VW 131
Query: 76 GSADDE-GQ----SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
G ++ GQ + K + P+ EA VV+ AG + +T G+VY G
Sbjct: 132 GCGNNVVGQIGVPVAMVVEKLTKVAGPWVRDPEAKVVQVTAGHTFSLFLTFTGQVYASG- 190
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
+ +FG G + + GE +VK K + E S+
Sbjct: 191 ---------SSEFGQLG---------------------NGKTGERLVKAGKIAYDIELSQ 220
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
G E VKIT++A+G +H+L L D G V+ WG+ G +LGL
Sbjct: 221 GLVQGLE-------------NVKITEIASGNQHSLALDDNGYVYSWGFAGYSRLGL 263
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 32/239 (13%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
S +G+L+ +G +D GQ L +H TP+ + + + A G H +++T GE
Sbjct: 625 VVSSNGELLMFG-MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGE 683
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------- 177
VY++G D+G G + +PT S + E++V
Sbjct: 684 VYSFG----------KNDYGQLGL----GHARNMKVPT-LVKTSLGESDEKIVAVSCGYY 728
Query: 178 -------KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
K + + R + G + S V L KI + G HTLIL
Sbjct: 729 HTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSN 788
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRS 289
G+V +G +GQLG GSR +P+ L + + D + + G +S GRS
Sbjct: 789 GRVMVFGRNNKGQLGAGSRT--LPSADLPLPVPSNSLANDEVVRIAAGFYSSYILTGRS 845
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Query: 41 PIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF 98
P + G+S + + CG+ + SE GKLITWG +D GQ + S H + +
Sbjct: 706 PTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGR-NDYGQLGIGSKDHKNSAQYV 764
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS 158
PLP + + A+ G H + + G V +G + G G+ +
Sbjct: 765 PLPLSSKIKTASCGCYHTLILMSNGRVMVFG----------RNNKGQLGAGSRTLPSADL 814
Query: 159 ALPTEQAPPSDKRAGEEVVK 178
LP PS+ A +EVV+
Sbjct: 815 PLPV----PSNSLANDEVVR 830
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 211 GVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------ 262
G+ I VAA G H L ++ G V+ WGY GQLGLGS I TP +I L
Sbjct: 554 GIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHI 613
Query: 263 -------EHAASGKDRPLLVRQGSVNSSGKAGRSY-----------------VKEIACGG 298
H+A L+ G +N G+ G + + E+ACG
Sbjct: 614 TTAAVSYHHSAVVSSNGELLMFG-MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGL 672
Query: 299 RHSAVVT 305
H+ +T
Sbjct: 673 YHTIAIT 679
>gi|342880692|gb|EGU81718.1| hypothetical protein FOXB_07768 [Fusarium oxysporum Fo5176]
Length = 605
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 108/286 (37%), Gaps = 57/286 (19%)
Query: 22 VYMWGYLPG--TSPEKSPILSPIPARLCGGDS--WKDVCGGGCGFALATSESGKLITWGS 77
VY WG G P S +P R+ D +D+ F A +E G L+ WG
Sbjct: 126 VYAWGSNVGKVIDPNSSEKYVKVPRRISFFDDKVLRDLKLTSV-FGAAVTEKGDLVQWGL 184
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
G + + P P P T +VK ++++ G VY+ +P+A
Sbjct: 185 -----------GYNQQDPSPVPTLTGKDLVKIDVSLDRIIALSRNGNVYS------IPAA 227
Query: 138 KVTRDFGSAGSFQKDS------TGKQSALPTEQAPPSDKRAGEEV--------------V 177
+ ++ G +K S G + + PS GE V
Sbjct: 228 RNDQEGGLKEERKKSSWSIWGSGGARENIHFRNLTPSGLSYGETVKDISSGQEHCLMLTS 287
Query: 178 KRRKTSSAREESENPASGDEFFT------------LSPCLVTLNPGVKITKVAAGGRHTL 225
K R S+A E P+ G P +T G + ++A G H+
Sbjct: 288 KGRVFSAAASALEFPSKGQMGIAGLNWHNRPKGPYDQPHEITTLKGFDVAQIATGDYHSA 347
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSR--IKMVPTPHLIPC-LEHAASG 268
+L G+++G+G GQLG+ + + + TP ++P L +A +G
Sbjct: 348 VLDKTGRIFGFGDNSFGQLGIDTDFGLSVSDTPVMVPTNLSYAGTG 393
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 102/278 (36%), Gaps = 88/278 (31%)
Query: 33 PEKSPILSPIPARLCGGDSW---KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLT 87
P + ++ +P ++ W K++ CG L + GK+ + G+ D +
Sbjct: 328 PSLAKVMVMVPRKM----DWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDV 383
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG 147
+ P+ + +A G AH +++T G+VY+WG
Sbjct: 384 ESLPNKRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWG------------------ 425
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
++ G+ G+E T + R+ + P L+
Sbjct: 426 ---SNAVGQ---------------LGQE------TDTTRQ-------------IIPRLIR 448
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
++ ++AAG H L L++ G+++ WG GQLGLG + V TP L+ L
Sbjct: 449 SIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSL----- 503
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
AG + IACGG HS V+
Sbjct: 504 ------------------AGVP-IAFIACGGNHSFAVS 522
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 98/253 (38%), Gaps = 54/253 (21%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVC--GGGCGFALATSESGKLITWGSA 78
VY WG G +++ I RL + K V G LA + SG+L WGS
Sbjct: 421 VYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGS- 479
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ GQ L G T E PT + A G H +V+++G ++ WG
Sbjct: 480 NAYGQLGL-----GMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWG--- 531
Query: 133 CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
FG G +S + L T ++ + R S + S
Sbjct: 532 -------KNTFGQLGLNDLNSRQFPTQLRTLRS-----------LGVRYVSCGDDFSVFL 573
Query: 193 ASGDEFFT-----------------LSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVW 234
+G FT + P +V G KIT++A G RHTL + G+++
Sbjct: 574 TAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 633
Query: 235 GWGYGGEGQLGLG 247
G+G G GQLG+G
Sbjct: 634 GFGLSGVGQLGIG 646
>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 438
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 106/280 (37%), Gaps = 53/280 (18%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G G ++A ++G + TWG + G Y S + P+ P+ SV +A +
Sbjct: 49 GHGLSVALLDNGTVWTWGHSWHGGLGY-ESVQDQYVPKRVPIYNVTSVDSC---FASVAA 104
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
+ + G V+TWGW E +G G D T P + RA +
Sbjct: 105 LKDDGTVWTWGWNE----------YGQLG----DGTTMDHNTPGMVGGLGNVRAVAVGIS 150
Query: 179 RRKT--------SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + G +++P V+ P +I ++AG H L + D
Sbjct: 151 HMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLP--RIVAISAGYNHNLAIDDA 208
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRPLLVR-QGSV-----N 281
G VW WG GQLG G+ I P P + L + A G L ++ G++ N
Sbjct: 209 GNVWTWGLNDCGQLGDGTNISS-PNPKKVKGLANVTAVAGGSSFSLALKDDGTIWAWGSN 267
Query: 282 SSGKAGRSYVKE---------------IACGGRHSAVVTD 306
G+ G K+ IA GG SA +T+
Sbjct: 268 VQGELGVGTTKDCPLPVKVQGLTNVIRIAAGGETSAAITN 307
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 22 VYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG G + + I SP P ++ G + V GG F+LA + G + WGS
Sbjct: 211 VWTWGLNDCGQLGDGTNISSPNPKKVKGLANVTAVAGGSS-FSLALKDDGTIWAWGS--- 266
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
Q L G + P P + +V++ AAG ++T G ++ WG E
Sbjct: 267 NVQGELGVGTTKDCPLPVKVQGLTNVIRIAAGGETSAAITNDGSLWVWGHNE 318
>gi|242045582|ref|XP_002460662.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
gi|241924039|gb|EER97183.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
Length = 432
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 110/296 (37%), Gaps = 68/296 (22%)
Query: 33 PEKSPILSPIPARL-CGGDSWKDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGK 90
PE P L+P P RL G++ G CG F A G + WG D G
Sbjct: 65 PESDPRLAPTPGRLPSAGETSGVEVGISCGLFHSALLVEGSVWVWGKGDGGRL---GLGD 121
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVP--- 135
P P P + A G H ++T +G+V+TWG+ RE +P
Sbjct: 122 ESSAFVPRPNPNLRDLRLLALGGIHSAALTTSGDVFTWGYGGFGALGHYVYHRELLPRQV 181
Query: 136 ----SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
K+T ++G +A T+ +GE R R +
Sbjct: 182 NGPWEGKIT---------HISTSGAHTAAITD--------SGELYTWGRDEGDGRLGLGS 224
Query: 192 PASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
E +LS P V P V + VA GG T+ L+ GQ+W WG +LG GS
Sbjct: 225 GGGPGEAGSLSVPSKVNALP-VPVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSNF 283
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P L+P L+ +R V ++ACGG HS +TD
Sbjct: 284 SDW-RPQLVPSLKS----------IR--------------VIQVACGGYHSLALTD 314
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 11/178 (6%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + SG + TWG + + P P E + + AH ++T++GE
Sbjct: 149 ALTTSGDVFTWGYGGFGALGHYVYHRE-LLPRQVNGPWEGKITHISTSGAHTAAITDSGE 207
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YTWG E + G + K +ALP P A TS
Sbjct: 208 LYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALPV----PVAAVACGGFFTMALTSD 263
Query: 185 AREESENPAS------GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ S S G F P LV +++ +VA GG H+L L+D G+V W
Sbjct: 264 GQLWSWGANSNFELGRGSNFSDWRPQLVPSLKSIRVIQVACGGYHSLALTDEGEVLSW 321
>gi|358060080|dbj|GAA94139.1| hypothetical protein E5Q_00787 [Mixia osmundae IAM 14324]
Length = 624
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 48/231 (20%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG--SFQKDSTGKQSALPT 162
++V ++G H +++T AG + VP++ G G + Q +T +++ P
Sbjct: 246 NIVTVSSGSDHVLALTTAGRAF------AVPASSRGNSNGQLGVRAVQLFTTTRKTDQPG 299
Query: 163 EQAPPS-----------------DKRAGEEVVKRRKTSS----AREESENPASGDEFFTL 201
+ PP D+ G+ + K ++ ++S++ + F T+
Sbjct: 300 DMPPPQQIQMIPDGFDVEFDKSYDRLLGDSIGKLANYNAEAIKTSDKSDSAQADIRFCTV 359
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM--VPTPHLI 259
L +L GV I ++ AG RH++ + G++ WG GQLGLG ++ +PTP +
Sbjct: 360 LHELPSLR-GVAIDQLVAGARHSVAKTKEGRILTWGANSYGQLGLGPQMAFPTIPTPTEL 418
Query: 260 P------------CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGG 298
P C + AA G L+V + + + G ++ +ACG
Sbjct: 419 PLTKSFPASVAVKCDKVAAGGDTTYLVVTRNEI----RTGNVSIEVLACGN 465
>gi|403349696|gb|EJY74288.1| hypothetical protein OXYTRI_04456 [Oxytricha trifallax]
Length = 1387
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
V+I+K+A +H+LI ++ G V+ WG GQLG G R +SG+
Sbjct: 403 VRISKIACSNKHSLICTNTGSVYSWGENDAGQLGYGCR--------------KESSGQLN 448
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMS 308
+ + + + ++ ++ACG HSAV+T+ S
Sbjct: 449 QVNQFFATPQKVEQLSKMFIVDVACGDFHSAVITNQS 485
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---SRIKMVPTPHLI 259
P + I V ++L L++ GQ++ WG G G LGLG SRI TP LI
Sbjct: 229 PQISIKDVKIANNYSLALTEEGQLYSWGSGMNGHLGLGDENSRI----TPELI 277
>gi|351711669|gb|EHB14588.1| Putative E3 ubiquitin-protein ligase HERC6 [Heterocephalus glaber]
Length = 895
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 77/195 (39%), Gaps = 59/195 (30%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+A S SG + +WG +D GQ L K+ ++P +P V A G AH +T+ G
Sbjct: 1 MALSMSGNVYSWG-GNDCGQLGLGHTKNTDSPSLVEVPDNQKVECVACGGAHTALLTQDG 59
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
++T+G G G +ST +
Sbjct: 60 LMFTFGA-------------GKHGQLGHNSTKNE-------------------------- 80
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL-SDMGQVWGWGYGGEG 242
L PCLVT G ++T++A G HTL SD+ +G+G EG
Sbjct: 81 -----------------LRPCLVTELSGNRVTQIACGRWHTLAYASDLDVFSSFGFGEEG 123
Query: 243 QLGLGSRI-KMVPTP 256
QLG G + +++P P
Sbjct: 124 QLGNGGKHNQLIPLP 138
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T SP LV + K+ VA GG HT +L+ G ++ +G G GQLG
Sbjct: 28 TDSPSLVEVPDNQKVECVACGGAHTALLTQDGLMFTFGAGKHGQLG-------------- 73
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTDM 307
++ + RP LV + S N V +IACG H+ A +D+
Sbjct: 74 ---HNSTKNELRPCLVTELSGNR--------VTQIACGRWHTLAYASDL 111
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+ +L G D + CG F++A ++SG + TWG D+ + T H P+
Sbjct: 770 VIEKLMGQDVVRVYCGNQ--FSMALTKSGAVYTWGKGDNYRLGHGTE-DHARHPKQIEAL 826
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ V A G HC+++TE GE+Y WG E
Sbjct: 827 SSKKVKDIAIGSLHCMAITEDGELYGWGRNE 857
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 113/294 (38%), Gaps = 67/294 (22%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + GK+ +WG DD G+ S + + P V A G +H ++T
Sbjct: 3564 SLALTTDGKVFSWGEGDD-GKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSN 3622
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV----- 177
G++YTWG E +G G D+T T+ P K E V
Sbjct: 3623 GDLYTWGLGE----------YGRLG--HGDNT-------TQLKPKQVKALAHERVVQVAC 3663
Query: 178 --KRRKTSSAREESENPASGD-EFFTL---------SPCLVTLNPGVKITKVAAGGRHTL 225
+ +T + +E + + GD +F L P V K+ ++ G + +L
Sbjct: 3664 GSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSL 3723
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLVRQ-GS 279
L+ GQVW WG G +LG G+ V P ++ L+ H A G L V G
Sbjct: 3724 ALTKSGQVWTWGKGDYFRLGHGTDAH-VRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQ 3782
Query: 280 V-----NSSGKAGRSY----------------VKEIACGGRHSA--VVTDMSYP 310
V N G+ G + ++ACG HS TDMS P
Sbjct: 3783 VFAWGDNDHGQQGNGTTTVNRKPALVVLEGYKISKVACGSSHSIAWATTDMSVP 3836
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASV 106
+ VC CG F+LA ++SG++ TWG D Y G H P+ +
Sbjct: 3710 QKVCQIECGAQFSLALTKSGQVWTWGKGD-----YFRLGHGTDAHVRKPQIVEGLKGKKI 3764
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
V A G HC++VT++G+V+ WG
Sbjct: 3765 VHVAVGALHCLAVTDSGQVFAWG 3787
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GGRH+L L+ G+V+ WG G +G+LG SR D+
Sbjct: 3552 IKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNC-----------------DK 3594
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ + K+ R V++IACG HSA +T
Sbjct: 3595 PRLIE------ALKSKR--VRDIACGSSHSAAIT 3620
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L LS G+V+ WG G +G+LG G+R PC DR
Sbjct: 4548 IKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNR---------SPC--------DR 4590
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P ++ + GK V +IA GG HSA +T
Sbjct: 4591 PRVID----SLRGKE----VVDIAAGGAHSACIT 4616
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 75/211 (35%), Gaps = 66/211 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E V+K
Sbjct: 4659 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIETLQGQGVMKVEC 4713
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T++G VYTWG G + + G
Sbjct: 4714 GSQFSVALTKSGSVYTWG----------------KGDYHRLGHG---------------- 4741
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + V + RK S+ + + K+ VA G H + +D G
Sbjct: 4742 SDDHVRRPRKVSALQNK------------------------KVIDVACGSLHCVACTDTG 4777
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+V+ WG EGQLG G+ + P L+ L
Sbjct: 4778 EVFSWGDNDEGQLGDGT-TNAIQRPRLVASL 4807
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 38/236 (16%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE 103
L G S K V CG +++A + +G++ +WG + G+ S + TP
Sbjct: 664 LITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGN-FGRLGHGSSEDQTTPMLLKFFKG 722
Query: 104 ASVVKAA--AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+V A +G A ++VT++G VY+WG D+G G D +
Sbjct: 723 HRIVDVACGSGDAQTLAVTDSGAVYSWG----------DGDYGKLGRGGNDGCKTPKVI- 771
Query: 162 TEQAPPSDKRAGEEVVKR---RKTSSA-----------REESENPASGDEFFTLSPCLVT 207
+K G++VV+ + S A + ++ G E P +
Sbjct: 772 -------EKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIE 824
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
K+ +A G H + +++ G+++GWG +GQLG S I P LI +E
Sbjct: 825 ALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPS-ISNFTEPTLIGGME 879
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
P L+T G ++ K+ G +++ L+ G+V+ WG G G+LG GS
Sbjct: 662 PALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGS 707
>gi|391347935|ref|XP_003748209.1| PREDICTED: regulator of chromosome condensation-like [Metaseiulus
occidentalis]
Length = 405
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 105/271 (38%), Gaps = 45/271 (16%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAAAGWAHCVSVTE 121
++A + + WGS D ++ S K+ E EP L S+ A G H + +++
Sbjct: 107 SVALTTDCHVFIWGSYRDNSGAFGISPKNPEFISEPMKLSLPDSITDIACGADHTLMLSQ 166
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR-- 179
G +YT G E ++ + + +++ +Q+ L P +R + V+
Sbjct: 167 EGVIYTMGIAEQGRLGRIRK----SHCCRENRRARQTMLTP--LPMRVRRYRKPVLFDGI 220
Query: 180 ---RKTSSAREESE-----------------NPASGDEFFTLSPC-LVTLNPGVKITKVA 218
R + AR S+ NP ++ F P L +P + T++
Sbjct: 221 WAGRFSGFARSVSDGRIWGWGLNNYHQLGEINPDDHEDNFVYQPVELAAFDPKKRWTQIC 280
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLG-------SRIKMVPTPHLIPCLEHAASGKDR 271
G +HTL L G V+ G G+LGLG K+ P P L C+ A+G +
Sbjct: 281 GGEQHTLALDSEGTVYSMGRPLYGRLGLGPADANDPDVTKLTPVPGLEECVVSIAAGDNC 340
Query: 272 PLLVRQG--------SVNSSGKAGRSYVKEI 294
+ + N G+ R K+I
Sbjct: 341 SFAIHKSGQLLSWGQGTNMLGQGDREIAKDI 371
>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
Length = 1185
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 42/240 (17%)
Query: 72 LITWGSADDEGQS-YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
L WG+ DD + + +P+P +P ++ A G+ H + + GEVY+ G
Sbjct: 9 LFGWGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNADGEVYSCGG 68
Query: 131 RECVPSAKVTRDFGSAG-----SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
E FG G S + T ++ T+ A + A R T
Sbjct: 69 NE----------FGQLGRSDSPSDFRRITALENHTITDIACGAYHNAAISYTGRLFTWGC 118
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ GD+ S ++ ++ +V+ G H+L+L+D +++ +G GQLG
Sbjct: 119 NSNGQLGREGDDS---SVKMIRSLAEHRVVQVSLGLEHSLVLTDTSRLFVFGSNIWGQLG 175
Query: 246 LGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
LG R D P+++ Q + +G R I+ GG HSAV+T
Sbjct: 176 LGFR-------------------SDLPIVIPQQLMCLAGLPIRC----ISAGGVHSAVLT 212
>gi|302507508|ref|XP_003015715.1| mitochondrial protein Fmp25, putative [Arthroderma benhamiae CBS
112371]
gi|291179283|gb|EFE35070.1| mitochondrial protein Fmp25, putative [Arthroderma benhamiae CBS
112371]
Length = 565
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 38/183 (20%)
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P + VV+ AAG HCV++T G V TWG + Q AL
Sbjct: 180 PEDVGVVQVAAGGMHCVALTHDGRVLTWGVND------------------------QGAL 215
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV---TLNPGVKITKV 217
+ + ++ + S + NP + +P + G I +V
Sbjct: 216 GRDTTWEGGLKDIDDAKSDDSSDSGSDSGLNP------YESTPTAIPSDAFPEGTVIVQV 269
Query: 218 AAGGRHTLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLE---HAASGKDRP 272
AAG + L+D G V+GWG G EG +G + K+ TP LI L+ H A G +
Sbjct: 270 AAGDSSSFALTDDGLVYGWGTFRGNEGIIGFDADTKIQTTPKLISGLKKITHVACGDNHA 329
Query: 273 LLV 275
L +
Sbjct: 330 LAI 332
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 74/207 (35%), Gaps = 60/207 (28%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPT----- 102
K++ GCG + A +SGK+ WG SY +G G+ PT
Sbjct: 371 KNIVHVGCGSFHSFAVHKSGKVYGWGL-----NSYCETGIQQGAGDDEAVILHPTIVDSL 425
Query: 103 -EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
+ S+V+ G H ++ T G+ WG + G QS L
Sbjct: 426 KDKSIVQICGGSHHTLARTTDGDCLVWGRLD----------------------GFQSGLK 463
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ P S V + + AR P V PG K VAAG
Sbjct: 464 VDTLPDS-------AVIKDDRNRAR------------VLFEPTAV---PGFKADYVAAGA 501
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGS 248
H++ + + G+ W WG+ Q G G+
Sbjct: 502 DHSIAIDNEGRAWTWGFSANYQTGQGT 528
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 21 VVYMWGYLPGTSP----EKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLIT 74
+VY WG G + + P + G K + CG ALA G +
Sbjct: 284 LVYGWGTFRGNEGIIGFDADTKIQTTPKLISG---LKKITHVACGDNHALAIDNRGAVFA 340
Query: 75 WGSADDE--GQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
WGS G+ + K +G P F LP ++V G H +V ++G+VY WG
Sbjct: 341 WGSGQQNQLGRRIVERNKLNGLQPREFGLPK--NIVHVGCGSFHSFAVHKSGKVYGWG 396
>gi|212275634|ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea mays]
gi|194690372|gb|ACF79270.1| unknown [Zea mays]
gi|219884485|gb|ACL52617.1| unknown [Zea mays]
gi|219885259|gb|ACL53004.1| unknown [Zea mays]
gi|219885461|gb|ACL53105.1| unknown [Zea mays]
gi|238010394|gb|ACR36232.1| unknown [Zea mays]
gi|414880676|tpg|DAA57807.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 556
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 58/149 (38%), Gaps = 50/149 (33%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV AAG AH +++T G+VY+WG FG G+ ++D +PT A
Sbjct: 5 VVAVAAGEAHTLALTGDGQVYSWG----------RGPFGRLGNGRED----DKLVPTAVA 50
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P ASG P + VAAG H+L
Sbjct: 51 PAVS-----------------------ASG-------------TPRPRFVAVAAGAYHSL 74
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
L D G +W WGY GQLG G + + P
Sbjct: 75 ALDDEGSLWSWGYNLYGQLGYGDQNSLFP 103
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDR 271
K+ VAAG HTL L+ GQV+ WG G G+LG G K+VPT + P + +ASG R
Sbjct: 4 KVVAVAAGEAHTLALTGDGQVYSWGRGPFGRLGNGREDDKLVPTA-VAPAV--SASGTPR 60
Query: 272 PLLV 275
P V
Sbjct: 61 PRFV 64
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 103/272 (37%), Gaps = 47/272 (17%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT----EASVVKAAAGWAHCV 117
+LA G L WGS + + G+ + PLP +VVK A G H V
Sbjct: 142 MSLAIDSLGSLWMWGSCPQQTDA----GEFCISSSSIPLPVWDFHGHTVVKVACGNEHVV 197
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL----------------- 160
+ AGE YT G + V A + G G K+S + +
Sbjct: 198 AAVSAGETYTGG--DLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEGSSWEVYEIACG 255
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT-LNPGVKITKVAA 219
+ A ++K++ +++ R T ++ + G SP V L G + +
Sbjct: 256 ASHTAVLANKKSTDQIESRCWTFGLGDKGQ-LGHGTTATICSPQPVDGLPTGSFLISLDC 314
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGS 279
G HT ++S G+VW WG E LGL C + + SG D +
Sbjct: 315 GLFHTTVVSSDGEVWCWGM--ERGLGL--------------CPDASFSGVDEGDALYPIR 358
Query: 280 VNSSGKAGRSYV--KEIACGGRHSAVVTDMSY 309
V S G ++ +IACG H+ +V Y
Sbjct: 359 VQSPETNGFKFLGPVQIACGAAHTVLVAGDGY 390
>gi|134114942|ref|XP_773769.1| hypothetical protein CNBH2220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256397|gb|EAL19122.1| hypothetical protein CNBH2220 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 560
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 97/246 (39%), Gaps = 60/246 (24%)
Query: 23 YMWGYLP------GTSPEKSPI-LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
Y++G P G E +P+ +SP G W + G F L S W
Sbjct: 75 YLFGRPPAMVQSNGVISENTPLKISPSSVGSPKGTKWVNGAAGRSHFLLVDSNGD---VW 131
Query: 76 GSADDE-GQ----SYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
G ++ GQ + K + P+ EA VV+ AG + +T G+VY G
Sbjct: 132 GCGNNVVGQIGVPVAMVVEKLTKVAGPWVRDPEAKVVQVTAGHTFSLFLTFTGQVYASG- 190
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
+ +FG G + + GE +VK K + E
Sbjct: 191 ---------SSEFGQLG---------------------NGKTGERLVKAGKIAYDIE--- 217
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-GSR 249
+ P LV VKIT++A+G +H+L L D G V+ WG+ G +LGL +
Sbjct: 218 ----------VPPRLVQGLENVKITEIASGNQHSLALDDNGYVYSWGFAGYSRLGLQDQK 267
Query: 250 IKMVPT 255
+++PT
Sbjct: 268 DRLLPT 273
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 25/190 (13%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
S ++ WG D G+ + TP LP ++ AAG H ++VT AG W
Sbjct: 71 SDTVLAWGDNKD-GELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAW 129
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR-----AGEE---VVKRR 180
G FG G D + S+ P P+ AG++ V
Sbjct: 130 GNNL----------FGQLG----DGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSA 175
Query: 181 KTSSAREESENPASGDEFFTL--SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
T+ A +++ GD T +P V L G +T +AAG H+L L+ G V WG
Sbjct: 176 GTALAWGDNDRGELGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGL 235
Query: 239 GGEGQLGLGS 248
+GQLG G+
Sbjct: 236 NSDGQLGDGT 245
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 26/219 (11%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P+ L G + + G G +LA + +G ++TWG + +GQ + TP
Sbjct: 199 TPVDVDLPAGTTVTAIAAG-IGHSLALTSAGTVLTWG-LNSDGQLGDGTTTDSSTPIAVD 256
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP +V AAG H ++VT AG + WG S G D T S+
Sbjct: 257 LPAGTTVTAIAAGSLHSLAVTTAGTILAWGNN-------------SDGQL-GDGTTTNSS 302
Query: 160 LPTEQAPPSDK--------RAGEEVVKRRKTSSAREESENPASGDEFFTLS--PCLVTLN 209
P P+ R V ++ A ++++ GD T S P V L
Sbjct: 303 TPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLP 362
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+T AG H+L ++ G + WG +G+LG G+
Sbjct: 363 ADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGT 401
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
T+ +PI +PA GG +LA + +G + WG DD GQ +
Sbjct: 298 TTNSSTPIAVNLPASTT-----ITAIDGGRDHSLAVTSAGSALAWGDNDD-GQLGDGTTT 351
Query: 91 HGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
+ TP LP + +V AG H ++VT AG + WG
Sbjct: 352 NSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWG 390
>gi|237835893|ref|XP_002367244.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964908|gb|EEB00104.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506080|gb|EEE31715.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 725
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 80/206 (38%), Gaps = 50/206 (24%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E+ E T VV+ A G +HC ++TE GE+YTWG + D+G G
Sbjct: 490 ESEETSQDRTPKKVVQVACGSSHCAALTEDGEIYTWG----------SDDYGQLG----- 534
Query: 153 STGKQS---ALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFF 199
GK+S LP +DKR T E +G
Sbjct: 535 -LGKESRFVLLPRRVDALADKRVVSVRCGHFFTCCTTSTGEVFVWGYGRDGECGNGRSDA 593
Query: 200 TLSPCLVTL--NPGVK------ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
L P L++L PG K + AGG H + G +W WG G EGQLG G I+
Sbjct: 594 AL-PVLISLEAQPGGKKHASGTVLDTVAGGGHLAARTQEGGLWMWGRGREGQLGRGDAIE 652
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQ 277
V A+ +D P LV +
Sbjct: 653 SV------------AASRDSPQLVEE 666
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 70/185 (37%), Gaps = 30/185 (16%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVKAAAGWAHCVSVTE 121
+T S L +WG D S TP+P P L +++ AAG H V T
Sbjct: 178 STDRSRILYSWGCGIDGQLGLGGSALSVSTPQPVPASALHDGEFILQCAAGAFHSVCCTS 237
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G V+TWG G D P E P S G R
Sbjct: 238 LGRVFTWG-------------RGGKNRLGHD-------WPRE-TPASASPGG-----RPY 271
Query: 182 TSSAREESENPASGDEFFTLSPCLVTL-NPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
SS + S + + TL C+ L ++ VA G HTL+L+D G+V+ WG
Sbjct: 272 RSSTKHLSASGIAETAVQTLPKCVEGLCRLSARVDAVACGEDHTLVLTDSGEVYSWGGNA 331
Query: 241 EGQLG 245
G+ G
Sbjct: 332 HGECG 336
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 107/300 (35%), Gaps = 93/300 (31%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETP 95
+ P P R G +++ CG LA +++G+L ++G + GQ L + P
Sbjct: 107 VFIPQPIRALAG---RNIVKVACGDTHTLAVTDTGELFSFGR-NQNGQLGLGTTSDAILP 162
Query: 96 EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTG 155
+P V A G H ++ T AG+V+ WGW +G+ G
Sbjct: 163 QPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGR----------YGNLGV------- 205
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
PP D+ P V GVK+T
Sbjct: 206 ---------GPPEDRHL------------------------------PSQVHGLEGVKVT 226
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE------------ 263
VA G RH++ + G V+ +G+ GQLG G I + P + L+
Sbjct: 227 SVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQL-VPKAVESLKDSRIVLIAGGWR 285
Query: 264 HAASGKDRPLLVRQGSVNSSGKAG-----------------RSYVKEIACGGRHSAVVTD 306
H ++ D L G N G+ G S VK ++CG RH+ VT+
Sbjct: 286 HTSAADDSGKLYSWG-WNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTE 344
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
DS + GG A +SGKL +WG + GQ + S P P + V
Sbjct: 274 DSRIVLIAGGWRHTSAADDSGKLYSWG-WNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLL 332
Query: 110 AAGWAHCVSVTEAGEVYTWGW---------RECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+ GW H +VTEAG+V++WG +A V S GS + + G ++
Sbjct: 333 SCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGVSASP 392
Query: 161 PTEQAPPSDKRA 172
T PP+D+ A
Sbjct: 393 LTTYVPPADRYA 404
>gi|221484866|gb|EEE23156.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 725
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 80/206 (38%), Gaps = 50/206 (24%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E+ E T VV+ A G +HC ++TE GE+YTWG + D+G G
Sbjct: 490 ESEETSQDRTPKKVVQVACGSSHCAALTEDGEIYTWG----------SDDYGQLG----- 534
Query: 153 STGKQS---ALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFF 199
GK+S LP +DKR T E +G
Sbjct: 535 -LGKESRFVLLPRRVDALADKRVVSVRCGHFFTCCTTSTGEVFVWGYGRDGECGNGRSDA 593
Query: 200 TLSPCLVTL--NPGVK------ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
L P L++L PG K + AGG H + G +W WG G EGQLG G I+
Sbjct: 594 AL-PVLISLEAQPGGKKHASGTVLDTVAGGGHLAARTQEGGLWMWGRGREGQLGRGDAIE 652
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVRQ 277
V A+ +D P LV +
Sbjct: 653 SV------------AASRDSPQLVEE 666
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 71/187 (37%), Gaps = 30/187 (16%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP---LPTEASVVKAAAGWAHCVSV 119
A ++ S L +WG D S TP+P P L +++ AAG H V
Sbjct: 176 ASSSDRSRILYSWGCGIDGQLGLGGSALSVSTPQPVPASALHDGEFILQCAAGAFHSVCC 235
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T G V+TWG G ++ L E P + A R
Sbjct: 236 TSLGRVFTWG------------------------RGGKNRLGHEW--PRETPASASPGGR 269
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTL-NPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
SS + S + + TL C+ L + VA G HTL+L+D G+V+ WG
Sbjct: 270 PYRSSTKHLSASGIAETAVQTLPKCVEGLCRLSARADAVACGEDHTLVLTDSGEVYSWGG 329
Query: 239 GGEGQLG 245
G+ G
Sbjct: 330 NAHGECG 336
>gi|308068118|ref|YP_003869723.1| alpha-tubulin suppressor and related RCC1 domain-containing protein
[Paenibacillus polymyxa E681]
gi|305857397|gb|ADM69185.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Paenibacillus polymyxa E681]
Length = 491
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 36/236 (15%)
Query: 95 PEPFPLPTEAS----VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
PE LPT+ + V+ AG V++T+ G V+TWG D G G+
Sbjct: 110 PEASNLPTKITSLTDVIAIQAGRDFNVALTKDGFVWTWG----------VNDRGQLGTGD 159
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL----SPCLV 206
S + +P + G+ V +K + NP F+ + S
Sbjct: 160 TKSRTEPIQVPNLKDVVEVAVKGDTTVALKKDGTVWGWGSNP-----FYRIGEGDSDVPT 214
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP-HLIPCLEH 264
LN VK+ + G + ++ D VW WG GQLG G+++ K VPT + ++
Sbjct: 215 QLNIPVKVKHIYIGASYAAVIDDQSNVWTWGANSVGQLGDGTKVSKSVPTKIDTLKSVKQ 274
Query: 265 AASGKDRPLLVRQ-GSVNSSGKA----------GRSYVKEIACGGRHSAVVTDMSY 309
A G L +++ G+V + G + S + IA GG S V++ S+
Sbjct: 275 LALGNSFGLALKENGTVVAWGGSIYGIIPKQIESLSGISSIAAGGSTSMAVSNSSH 330
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 92/240 (38%), Gaps = 35/240 (14%)
Query: 22 VYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
+Y WG P G E + + L G D CG LA S +G++ +WG
Sbjct: 375 IYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTE--HTLAVSVNGEMFSWGC 432
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------- 130
G+ L + P ++ + H SVTE+GE+YT+G
Sbjct: 433 GRG-GKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFGRSGPHLGY 491
Query: 131 -----RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
++ VP KV DF +A + S G + + GE S
Sbjct: 492 TTEDRKQAVPR-KV--DFSTANKIKAVSCGLEFTIALNSE-------GE------LYSFG 535
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ + +G P L+ GV+I+KV+ G +H ++ G VW WG GQLG
Sbjct: 536 KNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLG 595
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 52/257 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--TEASVVKAAAGWAHC 116
G F +A + G+L ++G +D GQ L +G + EP+ + + K + G H
Sbjct: 518 GLEFTIALNSEGELYSFGK-NDCGQ--LGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHV 574
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--QAPPSDKRAGE 174
+VT G+V+ WG + +FG G+ + ++ P+ D + G
Sbjct: 575 GAVTVNGDVWLWG----------SNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGG 624
Query: 175 EVVKRRKTSSAREESENPASGD--------EFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ N SG + +PC++++ KI KV G HT
Sbjct: 625 SHTVVLSCTGVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAA 684
Query: 227 LSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
+++ G ++ WG G G+LG G + + VPT L+ L +
Sbjct: 685 VTESGCLYTWGNGSRGRLGHGDHQDRYVPT--LVESLAYKQ------------------- 723
Query: 286 AGRSYVKEIACGGRHSA 302
V+ IACG H+A
Sbjct: 724 -----VQSIACGAYHTA 735
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 47 CGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV 106
CGG + G + +SG+L G A ++ Y+T+ P +P +
Sbjct: 622 CGGSHTVVLSCTGVVYVFGNGQSGQL---GVAVNQTSPYITN------PCILSMPNNTKI 672
Query: 107 VKAAAGWAHCVSVTEAGEVYTWG 129
K G H +VTE+G +YTWG
Sbjct: 673 AKVDCGIEHTAAVTESGCLYTWG 695
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 77/203 (37%), Gaps = 63/203 (31%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA S G + WGS++ GQ L G+ + P L TE + +AG H
Sbjct: 155 GADHSLALSAKGIVYLWGSSE-HGQ--LGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAY 211
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK 178
V G +Y +F + GK L T AP K
Sbjct: 212 VNTDGVLY---------------------TFGETEHGK---LGTNLAPK----------K 237
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK--ITKVAAGGRHTLILSDMGQVWGW 236
RK S P ++ +T VA GG HT+ L+ G+ + +
Sbjct: 238 CRKPSKV------------------------PDIQGLVTSVACGGSHTVALTCDGRAYSF 273
Query: 237 GYGGEGQLGLGSRIKMVPTPHLI 259
G G +GQLGLG R+ PHLI
Sbjct: 274 GDGSQGQLGLGQRVTHAGRPHLI 296
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 30/168 (17%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P F + +A V+ A G H V +T +G +++G + D+G G
Sbjct: 34 PGTFWVKNDA-VISVACGDQHSVFITASGRTFSFG----------SNDYGQLGH------ 76
Query: 155 GKQSAL--PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG-----------DEFFTL 201
G AL P DKRA R T A ++ + A G +
Sbjct: 77 GHTKALVNPRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHA 136
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P LV GV++ + AG H+L LS G V+ WG GQLGLG +
Sbjct: 137 DPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRK 184
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 74/196 (37%), Gaps = 58/196 (29%)
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPFPLPTEASVVKAA 110
++ + G C LA +E G+L +WG + GQ L S E P + +V+ A
Sbjct: 86 FRKIACGNC-HTLAVNEWGQLFSWG-CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIA 143
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++T GE+Y WG S ++ G S TE P
Sbjct: 144 CGTEHSIALTNDGELYAWG------------------SNREGQLGLGSYTTTEIKP---- 181
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
KR T +A V I +A GG HT+++S
Sbjct: 182 -------KRISTLAA--------------------------VPIAFIACGGYHTIVISKS 208
Query: 231 GQVWGWGYGGEGQLGL 246
G V+ WG GQLGL
Sbjct: 209 GAVFSWGRNTFGQLGL 224
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G ++A + G+L WGS + EGQ L S E +P + T A+V A A G H
Sbjct: 145 GTEHSIALTNDGELYAWGS-NREGQLGLGSYTTTEI-KPKRISTLAAVPIAFIACGGYHT 202
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE-----QAPPSDKR 171
+ ++++G V++WG FG G + +Q LP + A
Sbjct: 203 IVISKSGAVFSWG----------RNTFGQLGL----NDVQQRNLPCQLRTLRNAKVCYAT 248
Query: 172 AGEE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLI 226
GEE + + G+ + P V G +T+++ G RHTL
Sbjct: 249 CGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLA 308
Query: 227 L-SDMGQVWGWGYGGEGQLG 245
L G+V+ WG GG GQLG
Sbjct: 309 LVPSRGRVYAWGLGGAGQLG 328
Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 66/235 (28%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG + +A ++ GK+ + G+ +D GQ L K + + P K A G H
Sbjct: 40 ACGENYTVAITKEGKVYSCGN-NDYGQ--LGHEKARKRLQLIPGLDAFVFRKIACGNCHT 96
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
++V E G++++WG C + ++ G S TE+ P K G V
Sbjct: 97 LAVNEWGQLFSWG---CNMNGQL---------------GLNSVDCTERVPRMIKVLGTNV 138
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
I ++A G H++ L++ G+++ W
Sbjct: 139 -------------------------------------IVQIACGTEHSIALTNDGELYAW 161
Query: 237 GYGGEGQLGLGS------RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
G EGQLGLGS + K + T +P A G ++ + G+V S G+
Sbjct: 162 GSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGR 216
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 24/91 (26%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
K+A G HTL +++ GQ++ WG GQLGL S P +I L
Sbjct: 88 KIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVL------------- 134
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G + + +IACG HS +T+
Sbjct: 135 -----------GTNVIVQIACGTEHSIALTN 154
>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
Length = 854
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 86/249 (34%), Gaps = 81/249 (32%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G +LA + G + WGS + EGQ L G +P + V + G+ H +
Sbjct: 215 AGSHHSLALTSDGNVFAWGS-NLEGQLGLPDIS-GLVNKPTKVHIPEPVKRINTGYYHSI 272
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+TE G VY G E S K+ D +F KQ LP
Sbjct: 273 FLTENGLVYVCGESE---SGKLGIDI----NFSTQIMPKQMQLP---------------- 309
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
NP + VA GG HT+ L++ ++ G
Sbjct: 310 -------------------------------NP---VIYVACGGHHTMFLTENNNLYCTG 335
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLGLG+ + + TP L+ S G + I+CG
Sbjct: 336 SNSSGQLGLGTNVTELHTPKLL----------------------SQGALKNERISRISCG 373
Query: 298 GRHSAVVTD 306
H+A++T+
Sbjct: 374 ESHTAILTE 382
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 25/121 (20%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP---HLIPCLEHAAS 267
G KI ++ AG H+L L+ G V+ WG EGQLGL +V P H+ ++ +
Sbjct: 207 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKRINT 266
Query: 268 GKDRPLLVRQGSV------NSSGKAGRSY----------------VKEIACGGRHSAVVT 305
G + + + + + SGK G V +ACGG H+ +T
Sbjct: 267 GYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIMPKQMQLPNPVIYVACGGHHTMFLT 326
Query: 306 D 306
+
Sbjct: 327 E 327
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 86/249 (34%), Gaps = 81/249 (32%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G +LA + G + WGS + EGQ L G +P + V + G+ H +
Sbjct: 141 AGSHHSLALTSDGNVFAWGS-NLEGQLGLPDIS-GLVNKPTKVHIPEPVKQINTGYYHSI 198
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
+TE G VY G E S K+ D +F KQ LP
Sbjct: 199 FLTENGLVYVCGESE---SGKLGIDI----NFSTQIVPKQMQLP---------------- 235
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
SP + VA GG HT+IL++ ++ G
Sbjct: 236 ------------------------SP----------VIHVACGGHHTVILTEKDNLYCTG 261
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
GQLGLG+ + + P L+P G + I+CG
Sbjct: 262 SNSSGQLGLGTNVTELHIPKLLP----------------------RGALKNEKISHISCG 299
Query: 298 GRHSAVVTD 306
H+A++T+
Sbjct: 300 ESHTAILTE 308
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 25/121 (20%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP---HLIPCLEHAAS 267
G KI ++ AG H+L L+ G V+ WG EGQLGL +V P H+ ++ +
Sbjct: 133 GSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKQINT 192
Query: 268 GKDRPLLVRQGSV------NSSGKAGR----------------SYVKEIACGGRHSAVVT 305
G + + + + + SGK G S V +ACGG H+ ++T
Sbjct: 193 GYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLPSPVIHVACGGHHTVILT 252
Query: 306 D 306
+
Sbjct: 253 E 253
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 100/258 (38%), Gaps = 56/258 (21%)
Query: 65 ATSESGKLITWGSADDEGQSYLT--SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
A + GKL WG + GQ L +GK TP T+ V A G H ++VTE
Sbjct: 130 AVTADGKLFVWGR-NSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEE 188
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEV +WG G G ++ S S TE P K + +K +K
Sbjct: 189 GEVLSWG----------AAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNF--DGIKIKKI 236
Query: 183 SSAREESENPASGDEFFTLS---------------PCLVTLNPGVKITKVAAGGRHTLIL 227
++ S F P +V P + +VA GG HT ++
Sbjct: 237 AAGMLHSACIDEKGTLFIFGQKTEKGFGRPNEEFRPNIVEEIPFSE--EVACGGYHTCVV 294
Query: 228 SDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAG 287
+D G ++ WG G LGLG MV +P ++ +S P
Sbjct: 295 TDSGDLYSWGSNENGCLGLGG-TDMVRSPEILK-----SSLFKLP--------------- 333
Query: 288 RSYVKEIACGGRHSAVVT 305
V +++CG +H+AVV+
Sbjct: 334 ---VSKVSCGWKHTAVVS 348
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 34/138 (24%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-------- 253
+P V +++ VA G H++ +++ G+V WG G G+LG G + ++
Sbjct: 160 TPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTE 219
Query: 254 PTPHLIPCLE------------HAASGKDRPLLVRQGSVNSSGKAGR------------- 288
TP LI + H+A ++ L G G GR
Sbjct: 220 YTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKTEKG-FGRPNEEFRPNIVEEI 278
Query: 289 SYVKEIACGGRHSAVVTD 306
+ +E+ACGG H+ VVTD
Sbjct: 279 PFSEEVACGGYHTCVVTD 296
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCL-----EHAA 266
++ +V+AG H+ ++ G+++ WG GQLGLG K+V TP + CL + A
Sbjct: 117 RVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVA 176
Query: 267 SGKDRPLLV-RQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G + + V +G V S G AG + GR S+++
Sbjct: 177 LGSEHSIAVTEEGEVLSWGAAGSGRLGH----GRQSSIL 211
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 25/107 (23%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+T P +T GV + +VA GG H+ L+ G V+GWG GQLGLG++
Sbjct: 522 YTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNK--------- 572
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
K P L+R VK IACG H+A++T
Sbjct: 573 --------ENKSYPTLLRN--------MRSQMVKHIACGQDHTAMLT 603
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 67/251 (26%), Positives = 91/251 (36%), Gaps = 84/251 (33%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWA 114
CG LA S+ G+++ WG +D GQ L +G P P L AS VK G
Sbjct: 93 ACGDDHTLAVSDRGQVLGWGR-NDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSL 151
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H S +TRD G S+ D+T Q + T +D+
Sbjct: 152 H--------------------SMALTRD-GRLFSW-GDNTYGQLGIGTLVTNYTDR---- 185
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
P +T GV + +VA GG H+ L+ G V+
Sbjct: 186 ----------------------------PTELTSLRGVPLVRVACGGFHSFALTISGSVF 217
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
GWG GQLGLG++ K P L+R VK I
Sbjct: 218 GWGKNDVGQLGLGNK-----------------ENKAYPTLLRN--------MRSQMVKHI 252
Query: 295 ACGGRHSAVVT 305
ACG H+A++T
Sbjct: 253 ACGQDHTAMLT 263
Score = 45.4 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPC 261
P V+ V I VA G HTL +SD GQV GWG GQ GL + I+ P P +
Sbjct: 78 PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRI--- 134
Query: 262 LEHAAS 267
L+H AS
Sbjct: 135 LKHLAS 140
Score = 40.8 bits (94), Expect = 0.91, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-RIKMVPTPHLIPCLEHAAS 267
V I VA G HTL +SD QV GWG GQ GL + I+ P P + L H AS
Sbjct: 427 VVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRI---LRHLAS 480
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 82/231 (35%), Gaps = 85/231 (36%)
Query: 105 SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
SVV A G HC++V+ +G V++WG E G+ LPT
Sbjct: 1762 SVVAMACGQDHCLAVSASGHVFSWGAGE---------------------DGQLGLLPT-- 1798
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
P S R P V + + I +VA G H+
Sbjct: 1799 -PSSSHR-------------------------------PSKVPIPLPIPIIQVACGNSHS 1826
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL------EHAASGKDRPLLVRQG 278
L L+ G V+ WG GQLGLG + + TP +I L + AA G L
Sbjct: 1827 LALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLAD 1886
Query: 279 SV-----NSSGKAGRSYVKE-------------------IACGGRHSAVVT 305
V N G+ G + V E I+CG HSAV+T
Sbjct: 1887 LVYCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLT 1937
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWAH 115
G +LA ++ G + +WG + GQ L GK TP +V + AAG H
Sbjct: 1822 GNSHSLALTKGGDVFSWG-LNSHGQ--LGLGKEVPVQHTPVIICALAGVAVTQIAAGGTH 1878
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP---SDKRA 172
+ +T A VY G +C G G + D G+ + P S
Sbjct: 1879 SLFLTLADLVYCCGANKC----------GQLGVNRVDEKGRFNICMVPALRPLSVSFISC 1928
Query: 173 GEE----VVKRRKTSSAREESE----NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
GE + K K + + S+ + S +E + P LV G +++A G HT
Sbjct: 1929 GESHSAVLTKDGKVYTFGDGSQGQLGHSTSANE---VKPKLVAGLDG-PASQIACGRHHT 1984
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L+L GQ+W +G G +GQ G G + TP L+
Sbjct: 1985 LVLGSSGQLWAFGSGAKGQTGNGHNDSCL-TPTLV 2018
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
PGV ITK+ G RHTL L+ G V G+ +GQLG
Sbjct: 1710 PGV-ITKICCGDRHTLFLNADGNVLSCGHNSQGQLG 1744
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 94/242 (38%), Gaps = 54/242 (22%)
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
A+D GQ L + G P + + + G H ++VT+ G+V WG
Sbjct: 64 ANDRGQ--LGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWG-------- 113
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
D G G DS K+ P S + + + + + A GD
Sbjct: 114 --RNDRGQCGLSTGDSEDKRK--PRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDN 169
Query: 198 FF----------TL---SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
F TL P ++ PGV I ++A GG H+ LS G V+GWG GQL
Sbjct: 170 SFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQL 229
Query: 245 GLG-SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
GLG + ++ PTP + L +Q VK IACG ++A+
Sbjct: 230 GLGTTEDRVSPTPL-------------KNLKTKQ-------------VKYIACGQNYTAI 263
Query: 304 VT 305
+T
Sbjct: 264 LT 265
>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
Length = 1878
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
R T E +N + + ++T PC+V KI++++ G H+L LSD G V+ WG
Sbjct: 134 RGHTEFGNEHDKNDLN-ESWYTPIPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGI 192
Query: 239 GGEGQLGLG------SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG 287
G G LG G S +K+ P L AA + G V NS+G+ G
Sbjct: 193 GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLG 252
Query: 288 ------------------RSYVKEIACGGRHSAVVTDMSY 309
+ ++ +A G HS + Y
Sbjct: 253 TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGY 292
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 63/195 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFPL---PTEASVVKAAAGWA 114
G +LA S+SG + WG GQ L +G+ + P + PT+ V+ AAG
Sbjct: 174 GANHSLALSDSGLVFAWGI----GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGAR 229
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H + E G+V+ WG + G+ GS+ +PT+ S
Sbjct: 230 HSLCCNEDGQVFAWG-------SNSNGRLGTGGSY------GMKTVPTQIKSLSQ----- 271
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
IT VAAG H+ + G ++
Sbjct: 272 -------------------------------------YHITLVAAGESHSGCIDSFGYIY 294
Query: 235 GWGYGGEGQLGLGSR 249
WG GG G+LG G++
Sbjct: 295 TWGNGGSGKLGHGTQ 309
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHCV 117
G LA + SG+LITWG A G+ S K P P + +V A G H +
Sbjct: 673 GSSHTLALTASGELITWG-AGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSM 731
Query: 118 SVTEAGEVYTWGWRECVPSAK 138
+V+ G+++ WG E V S K
Sbjct: 732 AVSSLGDLWVWGKAENVLSEK 752
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
LN G I KVA G HTL L+ G++ WG G G+LG S
Sbjct: 661 LNLGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNS 701
>gi|408399778|gb|EKJ78871.1| hypothetical protein FPSE_01014 [Fusarium pseudograminearum CS3096]
Length = 605
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 52/242 (21%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F A +E G L+ WG G + + P P T +VK ++++
Sbjct: 169 FGAAVTEKGDLVQWGL-----------GYNQKDPSPVSTLTGKDIVKIDVSLDRIIALSR 217
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQAPPSDKRAGEE 175
G VY+ +P+++ ++ G QK S G + + PS GE
Sbjct: 218 KGNVYS------IPASRNDQEGGLKEEQQKSSWSIWGSGGSRENIHFRNLTPSSLAYGET 271
Query: 176 V--------------VKRRKTSSAREESENPASGDEFFT-LS-----------PCLVTLN 209
V K R S+A E P+ G LS P VT
Sbjct: 272 VKDISTGQEHCLMLTSKGRVFSAAASALEFPSKGQMGVAGLSWHNRPKGPYDQPHEVTTL 331
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--IKMVPTPHLIPC-LEHAA 266
G ++T++AAG H+ +L G+++G+G GQLG+ + + + TP ++P L +A
Sbjct: 332 QGFEVTQIAAGDYHSAVLDKTGRIFGFGDNSYGQLGIDTDYGLSVSDTPVMVPTNLSYAN 391
Query: 267 SG 268
+G
Sbjct: 392 TG 393
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 27/100 (27%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P P +I EH
Sbjct: 249 PGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVI---EHIKD 304
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
K + I CG H+A++TD+
Sbjct: 305 LK---------------------ISSIFCGENHTALITDL 323
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + + HLI
Sbjct: 90 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDER-NSFHLISFFT 147
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G + I+C
Sbjct: 148 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISC 207
Query: 297 GGRHSAVVT 305
G HSA VT
Sbjct: 208 GYYHSAFVT 216
>gi|254570104|ref|XP_002492162.1| Putative protein of unknown function [Komagataella pastoris GS115]
gi|238031959|emb|CAY69882.1| Putative protein of unknown function [Komagataella pastoris GS115]
gi|328351351|emb|CCA37750.1| Protein FMP25, mitochondrial [Komagataella pastoris CBS 7435]
Length = 641
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 40/198 (20%)
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
D+G+ YL + + T+ SV A G H V +++ G+V+T + K
Sbjct: 270 DKGRKYLGLKSYDKKYRKL---TDFSVKDIACGIDHIVILSQDGQVFTSATGTVRDTNKS 326
Query: 140 TRDFGSAGSFQKD---STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
+G Q D + + + +D+R G V+K+RK
Sbjct: 327 YGQYGIPTLTQFDEPPAPHEIHDVVLLNKYKTDERDGNPVIKKRK--------------- 371
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG--LGSRIKMVP 254
ITK+AAG HTL L D+G VW +G G+L + ++VP
Sbjct: 372 -----------------ITKIAAGDYHTLALDDLGYVWSFGKNTHGELAKHVSYETEIVP 414
Query: 255 TPHLIPCLEHAASGKDRP 272
P I +++ + + P
Sbjct: 415 VPKRIELIQNHFAKNEFP 432
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 30/122 (24%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHAA 266
KI +++ G H++ L++ G+V+ WG GQLGLGS+I TP L IP ++ A
Sbjct: 138 KIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTA 197
Query: 267 SGKDRPLLVRQGSV-----NSSGKAG----------RSY---------VKEIACGGRHSA 302
G L G+V N++G+ G + Y V I+CG H+A
Sbjct: 198 GGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTA 257
Query: 303 VV 304
V+
Sbjct: 258 VL 259
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
I V+ G H++ + D G ++ WG G EGQLG G
Sbjct: 86 IVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTG 119
>gi|115767093|ref|XP_787316.2| PREDICTED: RCC1 domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 371
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 90/246 (36%), Gaps = 68/246 (27%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASV--VKAAAGWAHCVSVT 120
AL + G + ++G GQ L G G+ P L A V V +AG H ++
Sbjct: 182 ALLLTAQGLVYSYGMGS-RGQ--LGHGDIGKEDVPKLLDAIACVPMVTISAGGWHSACIS 238
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G++Y WGW E Q LP +
Sbjct: 239 AIGDMYIWGWNE----------------------SGQLGLPPDLE--------------- 261
Query: 181 KTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
SS EE + D F + P ++ L GV ++KV+ G RHT +S +++ WG+G
Sbjct: 262 --SSRTEEGSSHVMADRISFQMVPAVLDLPGGVNVSKVSCGSRHTAAVSYDKRLYTWGWG 319
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
GQLG G +D P LV N R V ++ CG
Sbjct: 320 KYGQLGHGD-----------------VQSRDSPKLVDFFLQN------RLDVLDVTCGDW 356
Query: 300 HSAVVT 305
SAV T
Sbjct: 357 SSAVYT 362
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+ TLN G+KI +V+ G H+L LS QV+ WG GQLGLG P+P + LE
Sbjct: 122 ITTLN-GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLE 179
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 22/104 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
SP V G+ + +VAAGG H+ LS G +GWG GQL L R V +
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQS------ 224
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++PL + G++ + G V I+CG H+AV++
Sbjct: 225 --------NKPLSI--GALKNLG------VIYISCGDEHTAVLS 252
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+K V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 75 LKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL 125
>gi|392567364|gb|EIW60539.1| RCC1/BLIP-II [Trametes versicolor FP-101664 SS1]
Length = 604
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 47/228 (20%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYT------------WGWREC-VPSAKVTRDFGSAGSFQK- 151
V+ +AG H ++VT G + G+R+C VPS F +
Sbjct: 239 FVQISAGTDHMLAVTSEGRTFAHPITLNANSHGQLGFRKCDVPSPIDLEHFHLPHKHPRI 298
Query: 152 --DSTGKQSALPTEQAPPSDK------RAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
+ T K A P +A P+ + R+ E +V + ++ +++ N D+ F + P
Sbjct: 299 PLELTPKSIADPYAKASPAIRPSSSLARSSEALVGKEAVAAGLDDA-NIRFSDKLFEV-P 356
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM----VPTPHLI 259
L GV + +VA GGR + + + G+V GWG GQ+GLG + + VPT ++
Sbjct: 357 AL----KGVNVDRVATGGRSSFVKTAAGKVLGWGANEFGQIGLGGNVTLETITVPTEVIL 412
Query: 260 ----------PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
C++ A G + V S +G Y+ +ACG
Sbjct: 413 WRATPATMRTTCVDVFAGGD-----LTMFEVERSDGSGMPYIDVLACG 455
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+ TLN G+KI +V+ G H+L LS QV+ WG GQLGLG P+P + LE
Sbjct: 122 ITTLN-GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLE 179
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 22/104 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
SP V G+ + +VAAGG H+ LS G +GWG GQL L R V +
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQS------ 224
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
++PL + G++ + G V I+CG H+AV++
Sbjct: 225 --------NKPLSI--GALKNLG------VIYISCGDEHTAVLS 252
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+K V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 75 LKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL 125
>gi|383865068|ref|XP_003707997.1| PREDICTED: LOW QUALITY PROTEIN: regulator of chromosome
condensation-like [Megachile rotundata]
Length = 469
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 88/226 (38%), Gaps = 64/226 (28%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
PA + G V GG + ++G+++T+G +DEG + K G EP P+
Sbjct: 106 PATIPGYQDVVAVAAGGM-HNVCIRKTGEVLTFG-CNDEGALGRDTSKDGSETEPGPVDL 163
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
V+ AG +H ++ E G V+ WG SF +DS G
Sbjct: 164 PGKAVQVTAGDSHSAALLEDGRVFAWG------------------SF-RDSHGSMGL--- 201
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
G+E F + + P VKI K+A+G
Sbjct: 202 -----------------------------TLKGNERFP-----IEILPNVKIVKIASGAD 227
Query: 223 HTLILSDMGQVWGWGYGGEGQLG-LGSRIKMVPTPH-----LIPCL 262
H ++L++ G V+ G G +GQLG + +R T H LIP L
Sbjct: 228 HLVLLNENGHVYTCGCGEQGQLGRVAARAASRNTRHGIGPLLIPAL 273
>gi|307214730|gb|EFN89650.1| RCC1 and BTB domain-containing protein 1 [Harpegnathos saltator]
Length = 225
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 62/203 (30%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGWAHCVSV 119
LA ++ G++ +WG G L +G + P + + +V A G H +++
Sbjct: 65 VLALTDKGEVFSWG---HNGYCELGNGSTNQGLIPTMVNINLNGKHIVDIACGNHHSLAL 121
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
T+ GEVY WG C G GS + T Q P
Sbjct: 122 TDDGEVYAWGQNNC----------GQVGS----------GISTNQGAP------------ 149
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
R + N A G K+ + G ++ +++ G+V+GWGY
Sbjct: 150 ------RLVNSNLA-----------------GKKVICITCGQASSMAVTETGEVYGWGYN 186
Query: 240 GEGQLGLGSRIKMVPTPHLIPCL 262
G GQLG+G+ + V P +P L
Sbjct: 187 GVGQLGIGNYVNQV-NPVKVPGL 208
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 176 VVKRRKTSSA--REESENPASGDEFFTLSPCLV--TLNPGVKITKVAAGGRHTLILSDMG 231
+V + KT A S +GD TL P + + G+K T G H L L+D G
Sbjct: 14 IVTKDKTVYALGSNTSGCLGTGDMHSTLYPKKIEALCDKGIK-TFAYGSGPHVLALTDKG 72
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+V+ WG+ G +LG GS LIP + ++N +GK ++
Sbjct: 73 EVFSWGHNGYCELGNGS-----TNQGLIPTMV---------------NINLNGK----HI 108
Query: 292 KEIACGGRHSAVVTD 306
+IACG HS +TD
Sbjct: 109 VDIACGNHHSLALTD 123
>gi|407838156|gb|EKF99968.1| hypothetical protein TCSYLVIO_009110 [Trypanosoma cruzi]
Length = 644
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 114/331 (34%), Gaps = 79/331 (23%)
Query: 5 GSKREENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFAL 64
GS RE +E ++ K VV T P++ P+ PA G FA+
Sbjct: 217 GSARELDEHPDD-KSAVV--------TVPQRIPLFEQNPAVHLAA---------GYAFAM 258
Query: 65 ATSESGKLITWGSADDEGQSYL------TSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
A + + WG+ ++ GQS L S + E P +V+ G ++
Sbjct: 259 ALTAGHHVYFWGN-NNHGQSGLGPRYFDYSLRKVEEPTLVDTLEGKRIVQLGCGSFFSLA 317
Query: 119 VTEAGEVYTWGWRECV-------PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
+ + G +Y+WG EC+ A + F S + P K
Sbjct: 318 LGDDGTLYSWGLLECLGLGTTEEVRAAIDDPFIITESLSTEKRTVVLVPQVVHVPTEHKL 377
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTL-------------SPCLVTLN-----PGVK 213
+ + + S + E FT P LV G
Sbjct: 378 I--------RVHAGQWHSGVINTAGELFTWGVGYQGRLGHGDKEPALVPTKVRGALTGQH 429
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ VA G HT+ L++ G V+ WG GQ G S I V +P+ + LE A G
Sbjct: 430 VIDVACGSFHTVALTERGAVYCWGDNASGQCGAKSTIDAVTSPYRVVNLEFVAGG----- 484
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
K I+CG +H+ VV
Sbjct: 485 ----------------VAKAISCGRQHTVVV 499
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 202 SPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS----------RI 250
+P L + P GV++ VA G ++ LS+ G ++ +G G GQLGLGS +
Sbjct: 171 TPTLAQITPFGVRVVDVALGANYSSALSEDGNIYTFGNGDWGQLGLGSARELDEHPDDKS 230
Query: 251 KMVPTPHLIPCLE-----HAASG 268
+V P IP E H A+G
Sbjct: 231 AVVTVPQRIPLFEQNPAVHLAAG 253
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 32/151 (21%)
Query: 1 MEMNGSKREENEKMEECKETVVYMWG-----------YLPGTSPEKSPILSPIPARLCGG 49
+ + G R+ + ++ K ++Y WG +L ++P + I +P R+
Sbjct: 130 LNLQGVIRQLAPERQK-KRQLLYSWGSGASGELGTQRFLDCSTPTLAQI-TPFGVRVV-- 185
Query: 50 DSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE-----------TPEPF 98
DV G ++ A SE G + T+G+ D GQ L S + + P+
Sbjct: 186 ----DVALGA-NYSSALSEDGNIYTFGNGD-WGQLGLGSARELDEHPDDKSAVVTVPQRI 239
Query: 99 PLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
PL + V AAG+A +++T VY WG
Sbjct: 240 PLFEQNPAVHLAAGYAFAMALTAGHHVYFWG 270
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%), Gaps = 31/137 (22%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
L P + G+KI +V+ G H+L LS+ GQV+ WG GQLGLG +P
Sbjct: 116 NLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDR------------------PLLVRQGSVNSSGKAGRSY----- 290
IP + AA G L +RQ +V RS
Sbjct: 176 RSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKN 235
Query: 291 --VKEIACGGRHSAVVT 305
V I+CG H+AV+T
Sbjct: 236 LGVIYISCGYEHTAVLT 252
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVPT 255
+++ V+ G H+L + G+V+ WG G EGQLG+G I ++PT
Sbjct: 74 NLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPT 120
>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
Length = 1878
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
R T E +N + + ++T PC+V KI++++ G H+L LSD G V+ WG
Sbjct: 134 RGYTEFGNEHDKNDLN-ESWYTPVPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGI 192
Query: 239 GGEGQLGLG------SRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG 287
G G LG G S +K+ P L AA + G V NS+G+ G
Sbjct: 193 GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLG 252
Query: 288 ------------------RSYVKEIACGGRHSAVVTDMSY 309
+ ++ +A G HS + Y
Sbjct: 253 TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGY 292
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 63/195 (32%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ-SYLTSGKHGETPEPFPL---PTEASVVKAAAGWA 114
G +LA S+SG + WG GQ L +G+ + P + PT+ V+ AAG
Sbjct: 174 GANHSLALSDSGLVFAWGI----GQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGAR 229
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H + E G+V+ WG + G+ GS+ +PT+ S
Sbjct: 230 HSLCCNEDGQVFAWG-------SNSNGRLGTGGSY------GMKTVPTQIKSLSQ----- 271
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
IT VAAG H+ + G ++
Sbjct: 272 -------------------------------------YHITLVAAGESHSGCIDSFGYIY 294
Query: 235 GWGYGGEGQLGLGSR 249
WG GG G+LG G++
Sbjct: 295 TWGNGGSGKLGHGTQ 309
Score = 41.2 bits (95), Expect = 0.61, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
LN G I KVA G HTL+L+ G++ WG G G+LG S
Sbjct: 661 LNLGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNS 701
Score = 40.8 bits (94), Expect = 0.87, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-SVVKAAAGWAHCV 117
G L + SG+LITWG A G+ S K P P + +V A G H +
Sbjct: 673 GSSHTLVLTASGELITWG-AGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSM 731
Query: 118 SVTEAGEVYTWGWRECVPSAK 138
+V+ G+++ WG E V S K
Sbjct: 732 AVSSLGDLWVWGKAENVLSEK 752
>gi|402573744|ref|YP_006623087.1| cell wall binding protein [Desulfosporosinus meridiei DSM 13257]
gi|402254941|gb|AFQ45216.1| putative cell wall binding protein [Desulfosporosinus meridiei DSM
13257]
Length = 955
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 23/186 (12%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG LA + G + WG + GQ + G P + A V A+G H V
Sbjct: 28 GGSQSMLALNSDGTVWGWG-INQNGQ--IGDGTTNTKPYRVKVTGLADVKAIASGTTHSV 84
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE-- 175
++ + G+V+TWG + + + G + T K+S LP + SD +A
Sbjct: 85 ALQKDGDVFTWG-------SNFSGELG-------NGTLKESFLPVQVTGLSDVKAVSAGT 130
Query: 176 ----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+K T A ++ + G+ S V + V I+ V+A G HTL L+D G
Sbjct: 131 LFTVALKNDGTVWAWGDNSSGELGNSTGKSSITPVQIPGLVNISAVSAQGTHTLALTDDG 190
Query: 232 QVWGWG 237
VW WG
Sbjct: 191 TVWKWG 196
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVKAAAGWA 114
G F+LA S++GK+ TWG D Y G H P+ + +V++ + G
Sbjct: 2905 GAQFSLALSKNGKVWTWGKGD-----YFRLGHGSDSHVRWPQVVEELADKNVIQVSVGAL 2959
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ GEVY WG
Sbjct: 2960 HCIAVTDRGEVYAWG 2974
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 205 LVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
L L+P +K V +GGRH L L+ G+V+ WG G +G+LG G++I
Sbjct: 2731 LTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISY----------- 2779
Query: 264 HAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
DRP LV S K R ++++ACG HSA VT
Sbjct: 2780 ------DRPKLVE------SLKCKR--IRDVACGSSHSAAVT 2807
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 27/106 (25%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V +T+VA +GG+H L L+ G V+ WG G +G+LG GS+ + P LI
Sbjct: 3694 TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSK-ALCERPKLI 3752
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
L +D+ +V +ACGG HSA +T
Sbjct: 3753 ESL------RDK------------------HVVSVACGGAHSACIT 3774
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAAGWAHCV 117
G F++A + +G + TWG D + S H P+ + V++ A G HCV
Sbjct: 3872 GSQFSVALTAAGVVYTWGKGDYHRLGH-GSEDHVRRPQAVQGALQGKRVIQVAVGSLHCV 3930
Query: 118 SVTEAGEVYTWG 129
+ T++GEV+TWG
Sbjct: 3931 ACTDSGEVFTWG 3942
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA + SG + +WG DD G+ S E P+ + VV A G AH +T +G
Sbjct: 3719 LALTSSGDVFSWGEGDD-GKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASG 3777
Query: 124 EVYTWG 129
E+YTWG
Sbjct: 3778 ELYTWG 3783
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G ++ +VA G H + +D G+V+ WG EGQLG GS + P L+ L+
Sbjct: 3916 GKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGS-TNAIQRPKLVASLK 3967
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE-- 103
L G + CG G L S G + +WG D Y G+ G FP +
Sbjct: 3807 LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGD-----YGKLGRGGSDGCKFPQKIDSL 3861
Query: 104 --ASVVKAAAGWAHCVSVTEAGEVYTWG 129
A V+K G V++T AG VYTWG
Sbjct: 3862 QNAGVIKVECGSQFSVALTAAGVVYTWG 3889
>gi|408500679|ref|YP_006864598.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465503|gb|AFU71032.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1226
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 31/260 (11%)
Query: 23 YMWGYL------PGTSPEKS-PILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
Y WGY GT+ ++ P++ PA + ++ V GG +LA G W
Sbjct: 739 YAWGYNGFGQIGDGTTANRTMPVMVKKPAGVPTDFTYVQVAAGGY-HSLAIGSDGYTYAW 797
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLP----TEASVVKAAAGWAHCVSVTEAGEVYTWGW- 130
G+ +D GQ + + P P T ++ + G +++ G VYTWG
Sbjct: 798 GN-NDFGQLGNNTTANSSVPVRVHSPNGSGTGLKAIQVSTGMRSSMALGADGTVYTWGSL 856
Query: 131 ---------RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA---GEEVVK 178
++ VP+A V ++G F G Q + A D G
Sbjct: 857 SAGNGQYTSQQTVPAA-VMDPADASGVFHALQIGTQWSF--NLAIGQDHYVYAWGYNNYG 913
Query: 179 RRKTSSAREESENPA--SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ +++ + N A + F+ S P +K TKV+AGG H L + + G W W
Sbjct: 914 QLGNNTSDGLNTNTAHPTPKRVFSSSQSTAAAGPWLKATKVSAGGWHALAIDEDGNTWAW 973
Query: 237 GYGGEGQLGLGSRIKMVPTP 256
G GQLG GS P P
Sbjct: 974 GRNIAGQLGNGSNSGDDPNP 993
>gi|442755761|gb|JAA70040.1| Putative e3 ubiquitin protein ligase [Ixodes ricinus]
Length = 221
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTPHL 258
L PCLVT G ++T++A G HTL +SD+G+V+ +G G EGQLG G+ +++P P
Sbjct: 55 LKPCLVTELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK 114
Query: 259 IP 260
+P
Sbjct: 115 LP 116
>gi|241121413|ref|XP_002403206.1| regulator of chromosome condensation, putative [Ixodes scapularis]
gi|215493385|gb|EEC03026.1| regulator of chromosome condensation, putative [Ixodes scapularis]
Length = 309
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
EF P L+ G++I ++AAG H++ L+D G + WG G EGQLGLG+R VP
Sbjct: 95 QEFQHTEPALIRSLTGLQIKQLAAGAEHSIALTDKGVAFVWGCGKEGQLGLGTR-PSVPE 153
Query: 256 P 256
P
Sbjct: 154 P 154
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L ++I V+AG HT I+S G+V+ +G G GQLGLG++ P IP
Sbjct: 157 LKVDIRIMSVSAGYYHTAIVSAEGKVYAFGDGRNGQLGLGNKTTQSSKPQPIP 209
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G ++A ++ G WG EGQ L G PEP L + ++ +AG+ H
Sbjct: 119 GAEHSIALTDKGVAFVWGCGK-EGQ--LGLGTRPSVPEPLELKVDIRIMSVSAGYYHTAI 175
Query: 119 VTEAGEVYTWG 129
V+ G+VY +G
Sbjct: 176 VSAEGKVYAFG 186
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 24/94 (25%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
++ VA G HTL+ +D +V+G+G E QLGL S+ H P L + +G
Sbjct: 59 RVVLVACGRAHTLVATDDLKVYGFGMNTEHQLGLDSQ----EFQHTEPALIRSLTGLQ-- 112
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+K++A G HS +TD
Sbjct: 113 ------------------IKQLAAGAEHSIALTD 128
>gi|307204787|gb|EFN83345.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Harpegnathos saltator]
Length = 1665
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 32/231 (13%)
Query: 55 VCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC G+A LA S G + +G + GQ + S P LP ++ + G
Sbjct: 746 VCHISAGYAHTLALSVDGFVYAFG-CNVLGQLGVGSNNKSSIPMKVSLPEGIKLI--STG 802
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ--SALPTEQAPPS-- 168
+ H + V+ ++YTWG + S Q+D++ K+ ++ E+ P S
Sbjct: 803 YFHNLVVSNTNKLYTWGASPQALRLQAQAQKKSRILEQQDASEKRNRTSEDLEKMPNSSL 862
Query: 169 --DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV-------------- 212
D+ E + +T SA+ E+ + + + + L LN G
Sbjct: 863 NLDEEMKEFLENNIQTKSAQTETTSNIEIQKKLSENSNLKNLNTGFIEEDQTHLKPSVVD 922
Query: 213 ------KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
+IT+++AG H +++ G ++ WG +GQ+G G+R + +PTP
Sbjct: 923 TSLVKGQITQISAGCHHNALITKDGSLYTWGRNFDGQIGNGTRRDVPIPTP 973
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 70/196 (35%), Gaps = 63/196 (32%)
Query: 62 FALATSESGKLIT------WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
+ +S G L+T WG A GQ L +PE + +V A AG H
Sbjct: 645 YTWGSSVQGCLVTNNGIYVWG-ASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYH 703
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V++T G V+TWGW G G +T ++S
Sbjct: 704 SVALTADGRVFTWGW-------------GVHGQLGHGNTDEKSI---------------- 734
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
P LVT GV + ++AG HTL LS G V+
Sbjct: 735 ---------------------------PTLVTSLLGVVVCHISAGYAHTLALSVDGFVYA 767
Query: 236 WGYGGEGQLGLGSRIK 251
+G GQLG+GS K
Sbjct: 768 FGCNVLGQLGVGSNNK 783
Score = 38.1 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPT 255
SP LVT I AG H++ L+ G+V+ WG+G GQLG G + K +PT
Sbjct: 682 SPELVTSLAQEIIVDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDEKSIPT 736
>gi|298714248|emb|CBJ27384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 635
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 104 ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE 163
A V AAG+ +VTE +V +WG + T G+F D L E
Sbjct: 133 AGVSFVAAGYDISFAVTEDHDVLSWGAK----GIGATGHRLGTGAFDDDD----EDLYME 184
Query: 164 QAPPSDKRAGEEVVKRRKTSS--------------AREESENPASGDEFFTLSPCLVTLN 209
P D GEE+ + + SS R ES GD P L
Sbjct: 185 PRPIRD-LVGEEICQVQAGSSHCLAGSMGGDLYVWGRGESGQLGLGDRESKQIPVLNAGF 243
Query: 210 P-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---------SRIKMVPTPHLI 259
P G ++++VA G H+L+L+ G V+ WG+G G+LG+G S + PTP L+
Sbjct: 244 PEGTEVSQVAVGENHSLVLTKAGGVYSWGHGDRGRLGVGACWRVGVPQSEKNIFPTPMLL 303
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 110/301 (36%), Gaps = 71/301 (23%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
++ + P P R G+ V G LA S G L WG + GQ L + +
Sbjct: 178 DEDLYMEPRPIRDLVGEEICQV-QAGSSHCLAGSMGGDLYVWGRGES-GQLGLGDRESKQ 235
Query: 94 TP---EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG------------WRECVPSAK 138
P FP TE S V A G H + +T+AG VY+WG WR VP ++
Sbjct: 236 IPVLNAGFPEGTEVSQV--AVGENHSLVLTKAGGVYSWGHGDRGRLGVGACWRVGVPQSE 293
Query: 139 --------VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
+ F S ++ S G L A AGE V
Sbjct: 294 KNIFPTPMLLHTF-SKEVVRQVSCGPSFCLAVTAANVWSWGAGEGCVL------------ 340
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH--TLIL----SDMGQVWGWGYGGEGQL 244
GD +P + G + + G H L+L D G ++ WG G GQL
Sbjct: 341 --GHGDTLTRETPVQIEAFKGSVVLQAECGTWHCAALVLVPPCKDGGYLYTWGSGYHGQL 398
Query: 245 GLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
LG+R ++ PTP ++ L A + ++++ CG H A V
Sbjct: 399 ALGTR-QVQPTPAIVAKL----------------------LATQQLLRKVWCGSHHCAAV 435
Query: 305 T 305
T
Sbjct: 436 T 436
>gi|312379826|gb|EFR25987.1| hypothetical protein AND_08222 [Anopheles darlingi]
Length = 398
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 102/277 (36%), Gaps = 91/277 (32%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P+K I PI A CG D +L +E G++ + G +DD GQ+ G++G
Sbjct: 157 PQK--IDDPIKAIACGQDH-----------SLLVTEGGRVFSCGWSDD-GQT--GQGRYG 200
Query: 93 ETPEPFPLPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSF 149
P+ + +VK A+ +++ + GE++ WG E +G G
Sbjct: 201 LIDTVGPVEGDIKNERIVKVASTCDTVLAINDKGELFGWGNSE----------YGQLGEV 250
Query: 150 QKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN 209
D+ P P RR T S
Sbjct: 251 ADDN-------PQINTP------------RRLTFSKHCG--------------------- 270
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
K+ +AA G + L L++ G V+ WGY G LG G ++ P P LIP
Sbjct: 271 ---KLIDIAAAGSYCLALNENGDVFAWGY---GILGFGPNVQHQPAPTLIP--------- 315
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P L + A + V IACG HSA + D
Sbjct: 316 --PTLFGRNEF-----APNTRVVAIACGVTHSAAIND 345
>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Acromyrmex echinatior]
Length = 2956
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 55 VCGGGCGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC G+A LA S G L +G + GQ L +G + ++ P + + + G
Sbjct: 2050 VCCISAGYAHTLALSIDGVLYAFG-CNILGQ--LGTGDNIKSSVPIKVSLPDRITLISTG 2106
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS-ALPTEQAPPSDKR 171
+ H ++V+ ++Y WG V + S Q+D+ K++ AL + PSD
Sbjct: 2107 YFHNLAVSNTNKLYIWGASPQVLRLQAQAQKKIRISEQQDANEKRNKALGELEKIPSDAT 2166
Query: 172 ----AGEEVVKRR---KTSSAREESENPASGDEFFT-------------------LSPCL 205
+E + ++ +T S+ E+ + + +F T L PC+
Sbjct: 2167 NLNGKIKEFLNKKDGVQTKSSHTETSDIETQKKFETKNAHLKDFNFDLIEESQTHLKPCI 2226
Query: 206 V--TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTP 256
V +L G +I +++ G H +++ G ++ WG +GQ+G G+R + ++PTP
Sbjct: 2227 VDTSLVKG-QINQISVGCHHNALITKDGSLYTWGRNLDGQIGNGTRREVLIPTP 2279
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 90/245 (36%), Gaps = 64/245 (26%)
Query: 22 VYMWGY-LPGTSPEKSPILS-PIPARLCGGDSWK-DVCGGGCGF--ALATSESGKLITWG 76
+Y WG + G S +L P +C S K +V CG LA + +G + WG
Sbjct: 1911 IYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTLAVTNNG-IYAWG 1969
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
A GQ L +PE + +V A AG H V++T G ++TWGW
Sbjct: 1970 -ASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGW------ 2022
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
G G +T E+A PS
Sbjct: 2023 -------GVHGQLGHGNT-------DEKAIPS---------------------------- 2040
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPT 255
LV G+ + ++AG HTL LS G ++ +G GQLG G IK VP
Sbjct: 2041 --------LVKALLGIVVCCISAGYAHTLALSIDGVLYAFGCNILGQLGTGDNIKSSVPI 2092
Query: 256 PHLIP 260
+P
Sbjct: 2093 KVSLP 2097
>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 88/223 (39%), Gaps = 60/223 (26%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +ESGKL WG + EGQ L GK P P + A V + G+ H VT AG
Sbjct: 145 ALTESGKLFMWGD-NTEGQIGL--GKESHAPWPQEVSVGAPVSWVSCGYYHSALVTAAGA 201
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVK------ 178
+YT+G RD G G T +Q LP + P + GE V +
Sbjct: 202 LYTFG----------ERDSGKLG-----LTTEQ--LPRHRVPQPVRSIGEPVRQVACGGG 244
Query: 179 -----------RRKTSSAREESENPA-----SGDEFFTLS------------------PC 204
RR+ R + + A S D FT P
Sbjct: 245 HTVALTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPR 304
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
LV ++ +VA G H+ +++D G ++ +G G G+LGLG
Sbjct: 305 LVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLG 347
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 31/137 (22%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
L P + G+KI +V+ G H+L LS+ GQV+ WG GQLGLG + +P
Sbjct: 127 NLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRV 186
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGKAG--------RSY---------- 290
IP + AA G L G+ N++G+ +SY
Sbjct: 187 RSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKT 246
Query: 291 --VKEIACGGRHSAVVT 305
V I+CG H+AV+T
Sbjct: 247 LGVVYISCGHEHTAVLT 263
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP 254
+++ V+ G H+L + G+V+ WG G EGQLG+G I ++P
Sbjct: 86 LRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIP 130
>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
Length = 994
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+ + +++AGG H+ +LS G V+GWG GQLGLG T IP + + SGK
Sbjct: 169 IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD-----TTDRFIPTIVKSLSGKK- 222
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
I+CGG H+A ++
Sbjct: 223 -------------------TVSISCGGEHTATLS 237
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 80/215 (37%), Gaps = 52/215 (24%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE-- 163
V++ A G H ++++ G ++ WG G G +K+ G QS +
Sbjct: 118 VIQIACGDQHSMALSNDGLLFVWG----------ENALGQLG-LRKEQAGTQSPQHLQSL 166
Query: 164 -QAPPSDKRAG---------EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
+ P + AG VV ++SA + GD P +V G K
Sbjct: 167 CEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQL----GLGDTTDRFIPTIVKSLSGKK 222
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
++ GG HT LS G V+ +G GG GQLG S +K P L+
Sbjct: 223 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNS-LKDEHHPRLV-------------- 267
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMS 308
+ S V ++ CG H+ V D S
Sbjct: 268 ----------AELWGSKVSQVTCGRHHTLVFEDSS 292
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 4379 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMY-----------------DR 4421
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ + G V +IACGG HSA +T
Sbjct: 4422 PKLIEE-------LLGTEIV-DIACGGHHSAAIT 4447
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 109/292 (37%), Gaps = 70/292 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + + S + A G H ++T
Sbjct: 3358 ALALTQDGKIFSWGEGED---GKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3414
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
+GE+YTWG G G T Q Q+ G+ V+
Sbjct: 3415 SSGELYTWG-------------LGEYGRLGHGDTATQMKPKLVQS-----LVGQRVIQVA 3456
Query: 178 ---KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHT 224
+ +T + + + GD F +P L+ G+ + ++ G + +
Sbjct: 3457 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3516
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLVRQ-G 278
L L+ G+VW WG G +LG G+ V P L+ L H A G L V G
Sbjct: 3517 LALTKYGEVWTWGKGDYFRLGHGND-HHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTG 3575
Query: 279 SV-----NSSGKAGR-----------------SYVKEIACGGRHSA--VVTD 306
V N G+ G + V ++CG HS V+TD
Sbjct: 3576 QVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTD 3627
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
GD+ P L+ I K+A +GG+H L L+ G+++ WG G +G+LG G+ + +
Sbjct: 3327 GDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL 3386
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
D+P L+ S K+ R +++IACG HSA +T
Sbjct: 3387 -----------------DKPRLIE------SLKSKR--IRDIACGSGHSAAIT 3414
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGW 113
G G + A + SG+L TWG + Y G HG+T P+ V++ A G
Sbjct: 3406 GSGHSAAITSSGELYTWGLGE-----YGRLG-HGDTATQMKPKLVQSLVGQRVIQVACGS 3459
Query: 114 --AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
A +++T G VY+WG + K+ R GS G + + + L Q +
Sbjct: 3460 RDAQTMALTADGSVYSWGDGDF---GKLGRG-GSDGCYTPLLIDRLNGLGVVQIECGAQF 3515
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + + + G++ P LV G K+ VA G H L ++D G
Sbjct: 3516 SLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTG 3575
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
QV+ WG GQ G GS I + P L+ L+ A
Sbjct: 3576 QVYAWGDNDHGQQGNGSTI-VNKKPSLVHELDDA 3608
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4545 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4603
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4604 CTDKGEVFTWG 4614
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ V+K
Sbjct: 4490 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4544
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4545 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4572
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + +D G
Sbjct: 4573 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4608
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4609 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4641
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 58/141 (41%), Gaps = 31/141 (21%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD + P LV IT +A G ++ +LS G+++ WG G G+LG G+ V
Sbjct: 540 GDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNS-DNVL 598
Query: 255 TPHLIPCLE-----HAA--SGKDRPLLVRQGSVNSS------GKAGRS------------ 289
P L+ L H A SG + L V + S GK GR
Sbjct: 599 IPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVD 658
Query: 290 -----YVKEIACGGRHSAVVT 305
V ++ CGG+ SA +T
Sbjct: 659 KLLDINVAKVYCGGQFSAALT 679
>gi|329927260|ref|ZP_08281541.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
gi|328938563|gb|EGG34947.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
Length = 1058
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 74/199 (37%), Gaps = 57/199 (28%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEAS----VVKAAAG 112
G + LA E G L++WG + GQ S G + P+P VV +AG
Sbjct: 250 GNDYTLALKEDGTLLSWG-VNGYGQLGSDTLQGTYSNYPKPVLDKASGDAFGHVVDISAG 308
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
AH ++ E G V+TWG SA +T G
Sbjct: 309 IAHVAAIREDGSVWTWGGNTIWGSADITGQLGR--------------------------- 341
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG-VKITKVAAGGRHTLILSDMG 231
G++ ++ R P VT PG K+ + GG HT+I+ D G
Sbjct: 342 GDDRLEER----------------------PGRVTRLPGNAKVLQAETGGHHTVIMLDNG 379
Query: 232 QVWGWGYGGEGQLGLGSRI 250
+W G E QLG G ++
Sbjct: 380 TLWSMGSNREKQLGGGYKM 398
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 91/227 (40%), Gaps = 11/227 (4%)
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
++ +WG A EGQ + P+ P+ +S+ A G AH +++T AG+V +WG
Sbjct: 19 RVWSWG-AGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGR 77
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
S ++ + S + +G +
Sbjct: 78 GN---SGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFG 134
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS-R 249
GD SP V+ + +VA G RH+L+L QV+G+G G GQLG+ + R
Sbjct: 135 QLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDR 194
Query: 250 IKMVPTPHLIPCLEH------AASGKDRPLLVRQGSVNSSGKAGRSY 290
+K V P ++ E AA+G + G V + G+ + +
Sbjct: 195 VKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRGFKGF 241
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGW-RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
+ AA H +V+ G VYTWG + A+V + S+ +F K + G AL
Sbjct: 212 IAGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSG 271
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
G + + P + P L G KIT +A G H+
Sbjct: 272 EGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPGL----DGTKITDIATGAEHS 327
Query: 225 LILSDMGQVWGWGYGGEGQLGLG-SRIKMVPT 255
+I+++ G++ WG+G GQLGLG +R ++ P
Sbjct: 328 VIVTEHGEIKTWGWGEHGQLGLGDTRDRISPV 359
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 100/265 (37%), Gaps = 58/265 (21%)
Query: 7 KREENEKMEECKETVVYMWGYLPGTSPE---------------KSPILSPIPARLCGGDS 51
K+ ENE ++ E V+ WG GT + P LS I + CGG
Sbjct: 5 KKTENEDDKDESEQRVWSWG--AGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGG-- 60
Query: 52 WKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+A + +GK+++WG + + + P+ + +A
Sbjct: 61 ---------AHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSA 111
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL--PTEQAPPSD 169
GW H V++ G V+T G GSF + G ++ P + + D
Sbjct: 112 GWGHSGFVSDNGCVFTCG----------------DGSFGQLGHGDHASHCSPVKVSCFVD 155
Query: 170 KRAGEEVVKRRKT-----------SSAREESENPASGDEFFTLS-PCLVTLNPGVKITKV 217
+ + R + + + + S D +++ P +V+ GV+I +
Sbjct: 156 QHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAGI 215
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEG 242
AA G H+ +S G V+ WG G +G
Sbjct: 216 AANGDHSAAVSVDGHVYTWGRGFKG 240
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 31/137 (22%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
DE F P L+ I+ +A GG H + L+ G+V WG G GQLG G +
Sbjct: 38 DEHF---PQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLY 94
Query: 256 PHLIPCLE-----HAASGKDRPLLVR---------QGSVNSSGKAGRS------------ 289
P + L+ H ++G V GS G +
Sbjct: 95 PKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFV 154
Query: 290 --YVKEIACGGRHSAVV 304
+V+++ACG RHS V+
Sbjct: 155 DQHVEQVACGMRHSLVL 171
>gi|408501717|ref|YP_006865636.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
gi|408466541|gb|AFU72070.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
Length = 1828
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 97/246 (39%), Gaps = 48/246 (19%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKD----VCGGGCGFALATSESGKLITWG 76
VY WG G + + I P R+ ++ K G F++A + G + TWG
Sbjct: 239 VYAWGDNSKGELGDSTTINKNTPVRITENEAIKGKTFISVSAGTTFSMALASDGTVYTWG 298
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE---- 132
D + L +G + P A++ +AG+ H ++++ +G +YTWG E
Sbjct: 299 ---DNSRGELGNGSTTNSSVPVKANLNATITAISAGYWHAMALSSSGTIYTWGDNEYGQL 355
Query: 133 --------------CVPSAKVTRDFGSAG-SFQK--DSTGKQSALPTEQAPPSDKRAGEE 175
V S+ VT SAG FQ DS G A Q G+
Sbjct: 356 GNGHTGVNVNASPAAVSSSGVTFTTISAGYDFQTALDSQGHAYAWGRNQ-------GGQL 408
Query: 176 VVKRRKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKI-TKVAAGGRHTLILSDMGQ 232
+ +S+ P+ GD T NP + T + AG H L LS+ G+
Sbjct: 409 SIGTMDGTSSGSNVYTPSRIYGDS---------TGNPDSTVYTDIDAGYLHVLALSNSGK 459
Query: 233 VWGWGY 238
V+ WGY
Sbjct: 460 VYYWGY 465
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 99/283 (34%), Gaps = 90/283 (31%)
Query: 34 EKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE 93
K+P+ P+ G D G GF+LA G WG D G+ L G G
Sbjct: 1366 SKTPVQVKKPSD-AGTDFAYTQVSAGYGFSLALGSDGNAYAWG---DNGRGQLGKGAAGG 1421
Query: 94 T-------PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
T +P T+ + + +AG H ++V + + Y WG
Sbjct: 1422 TNTTPVQVKKPSGAGTDFAYTQVSAGGYHSLAVGKDHQAYAWG----------------- 1464
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV 206
D+ G +V T +A P V
Sbjct: 1465 ----------------------DRSNGGQVGDGNTTGNA-----------------PAPV 1485
Query: 207 TLN-----PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+N PG ++ +V+AG +H+LI+ GQ + WGYG G+LG ++ TP +
Sbjct: 1486 AVNASATSPGFQVRQVSAGYQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQA-TPVSVSS 1544
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
P+ GS+ + +++ GG HS +
Sbjct: 1545 ----------PVKYEDGSIG-------FFATQVSAGGSHSLAI 1570
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 22 VYMWGYLP--GTSPEKSPILSPIPARLCGGDSWKD----VCGGGCGFALATSESGKLITW 75
VY WG G K+ + P R+ D+ K G +++A + G + TW
Sbjct: 799 VYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGKIFIAVSAGDAYSMALASDGTVYTW 858
Query: 76 GSADDEGQSYLTSGKHGE-TPEPFPLPTE-ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + G+ L +G G + EP T+ A + +AG A+ +++ G VYTWG
Sbjct: 859 G---NNGKGQLGNGTTGSYSSEPVKAQTDNAKITAISAGRAYAMALASDGTVYTWG 911
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 38/253 (15%)
Query: 14 MEECKETVVYMWG-----------YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
M + VY WG Y ++P K LS I A G S G
Sbjct: 899 MALASDGTVYTWGDNTQGQLGIGNYDSHSTPTKVTALSNITAISAGFTS---------GT 949
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL-------PTEASVVKAAAGWAH 115
AL G TWG +D+GQ L +G +P P + P + +AG+ H
Sbjct: 950 AL--DSQGHAWTWGQ-NDKGQ--LGNGAPNRSPTPTRVQDLDTGQPDTRFYIAISAGYQH 1004
Query: 116 CVSVTEAGEVYTWGWRECVPSA---KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+++ ++Y WG + S V++ +A SF + + + + +
Sbjct: 1005 VLALDTDHDLYGWGSGTAIGSTTDTNVSKRGSTAISFGDEPVNITAISAGDDGSEAIDDS 1064
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
G+ ++ A + N + + ++P +TL VK V+ H + G
Sbjct: 1065 GKIYTWGKE---AYGQLGNGVYDNTAWQINPKTITLAQSVKACTVSTSSHHQTAIGSDGL 1121
Query: 233 VWGWGYGGEGQLG 245
++ WGY QLG
Sbjct: 1122 LYTWGYSYYNQLG 1134
>gi|325185526|emb|CCA20008.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
gi|325188743|emb|CCA23274.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 992
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 85/237 (35%), Gaps = 69/237 (29%)
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + T G AD + +L TP+ P+ + K +A H V++ G+ +TWG
Sbjct: 169 GLVYTCGRADYQLGYHLPRALIQSTPKIVLFPSACPITKISASKFHTVALNADGQCFTWG 228
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREES 189
FG G R G E
Sbjct: 229 -------------FGKGG-----------------------RLGLET------------- 239
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ L P LV V + KVAAG HTL LS GQ++ WG GQLG S+
Sbjct: 240 -------QCDHLEPALVKKLAHVFLVKVAAGENHTLALSQNGQLYSWGSNSFGQLGHSSK 292
Query: 250 IKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ L P A G L+VR+ + A RS+ I C SA ++D
Sbjct: 293 CTL--ESRLFPKRIDALRG----LIVREIA------ASRSHSAAI-CESHKSANISD 336
>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
siliculosus]
Length = 983
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 99/273 (36%), Gaps = 62/273 (22%)
Query: 11 NEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWK--DVCGGGCG--FALAT 66
N + E ++ WG G + P P +C +VC CG +A
Sbjct: 60 NHSILRTSEGKLFRWGVEDGD-------VHPFPTGVCTQIPLPCIEVC---CGRKHTVAL 109
Query: 67 SESGKLITWGSADDEGQSYLTSGKHGET-----PEPF----PLPTEASVVKAAAGWAHCV 117
+ G +++WG+ Y HG+ P P VV+ A G H
Sbjct: 110 MKGGFVMSWGTG------YFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSA 163
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
T+AG V+TWG+ +G G+ KD+T + +L + + + GE
Sbjct: 164 VATDAGRVFTWGFNR----------YGQCGNGSKDNTVPEPSL-VDLSRVTPGAVGEVP- 211
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCL------------------VTLNPGVKITKVAA 219
K R S G +T C VT + + AA
Sbjct: 212 ---KVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAA 268
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
G H + LS +V+ WGYG EGQ G GS + M
Sbjct: 269 GDFHMVALSRKREVFSWGYGAEGQGGHGSLLHM 301
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 22/104 (21%)
Query: 205 LVTLNP---GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
L L+P G ++ +VA GG H+ + +D G+V+ WG+ GQ G GS+ VP P L+
Sbjct: 140 LRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDL 199
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
V G+V V ++ CG HSA+VT
Sbjct: 200 SR-----------VTPGAVGE--------VPKVLCGRHHSALVT 224
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 38/91 (41%), Gaps = 21/91 (23%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+V G +HT+ L G V WG G GQLG G P L+
Sbjct: 98 EVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASY-----------------RHPRLL 140
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
R+ G+ V ++ACGG HSAV TD
Sbjct: 141 RRLDPQRLGE----RVVQVACGGYHSAVATD 167
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 4040 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 4082
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ + G V +IACGG HSA +T
Sbjct: 4083 PKLIEE-------LLGTEIV-DIACGGHHSAAIT 4108
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 110/292 (37%), Gaps = 70/292 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + + S + A G H ++T
Sbjct: 3033 ALALTQDGKVFSWGEGED---GKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAIT 3089
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
+GE+YTWG G G T QS Q+ G+ ++
Sbjct: 3090 SSGELYTWG-------------LGEYGRLGHGDTATQSKPKLVQS-----LVGQRIIQIA 3131
Query: 178 ---KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHT 224
+ +T + + + GD F +P L+ G+ + ++ G + +
Sbjct: 3132 CGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3191
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLVRQ-G 278
L L+ G+VW WG G +LG G+ V P L+ L H A G L V G
Sbjct: 3192 LALTKYGEVWTWGKGDYFRLGHGND-HHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIG 3250
Query: 279 SV-----NSSGKAGR-----------------SYVKEIACGGRHSA--VVTD 306
V N G+ G + V ++CG HS V+TD
Sbjct: 3251 QVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTD 3302
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+ I + D+
Sbjct: 3021 IKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL-----------------DK 3063
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ S K+ R +++IACG HSA +T
Sbjct: 3064 PRLIE------SLKSKR--IRDIACGSGHSAAIT 3089
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4206 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4264
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4265 CTDKGEVFTWG 4275
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 18/218 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGW 113
G G + A + SG+L TWG + Y G HG+T P+ +++ A G
Sbjct: 3081 GSGHSAAITSSGELYTWGLGE-----YGRLG-HGDTATQSKPKLVQSLVGQRIIQIACGS 3134
Query: 114 --AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
A +++T G VY+WG + K+ R GS G + + + L Q +
Sbjct: 3135 RDAQTMALTADGLVYSWGDGDF---GKLGRG-GSDGCYTPLLIDRLNGLGVVQIECGAQF 3190
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + + + G++ P LV G K+ VA G H L ++D+G
Sbjct: 3191 SLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIG 3250
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
QV+ WG GQ G G+ I + P L+ L+ A +
Sbjct: 3251 QVYAWGDNDHGQQGNGTTI-VNKKPSLVHELDDARVNR 3287
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ VVK
Sbjct: 4151 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVVKVEC 4205
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4206 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4233
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + +D G
Sbjct: 4234 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4269
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4270 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4302
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 37/249 (14%)
Query: 18 KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
+ + VY+WG L G S K P+ S + ++L K V GG S+
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPVHIAGGSKTLFVVSQ 2984
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
GKL G + G+ L + P+P P ++ + K + +G H +++T+ G+V+
Sbjct: 2985 EGKLYACGEGTN-GRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVF 3043
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
+WG E G S D +L +++ +G TSS
Sbjct: 3044 SWGEGE-------DGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAA---ITSSGE 3093
Query: 187 E------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
E GD P LV G +I ++A G R T+ L+ G V+ WG
Sbjct: 3094 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGD 3153
Query: 239 GGEGQLGLG 247
G G+LG G
Sbjct: 3154 GDFGKLGRG 3162
>gi|296424151|ref|XP_002841613.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637858|emb|CAZ85804.1| unnamed protein product [Tuber melanosporum]
Length = 465
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 45/211 (21%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
LP + +V A G H ++++ G+VY+WG + + + G++
Sbjct: 72 LPEKVGIVAVAIGGMHGLALSHEGKVYSWGVND------------------QYALGRE-- 111
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNP-GVKITKVA 218
T+ PP +V + S EE NP P L+T P G IT +A
Sbjct: 112 --TKYTPPVG-----DVGSDEDSDSDDEEPLNPLES------MPMLITAFPEGTVITNIA 158
Query: 219 AGGRHTLILSDMGQVWGWGYG--GEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRPL 273
AG ++ ++D G+V+GWG +G LG + ++ P L+P L++ + G D L
Sbjct: 159 AGDSVSIAVTDTGKVYGWGTFRCSDGILGFNEKTRIQSVPVLLPTLKNIVQVSVGTDHVL 218
Query: 274 -LVRQGSVNSSG-----KAGRSYVKEIACGG 298
L R+G+V + G + GR V+ G
Sbjct: 219 GLTREGNVFAWGNGQQFQLGRRVVERTRLNG 249
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 77/196 (39%), Gaps = 52/196 (26%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKH-GETPEPFPLP------TEASVVKAAA 111
G + A +E GK+ WG + GQ + KH GE P+P E +V+ +A
Sbjct: 268 GSYHSFAITEDGKVWAWG-LNQFGQCGIYDPKHAGEDNTVVPVPTVVQGLIEHKIVQISA 326
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +VTE GE+ WG + G Q L E P
Sbjct: 327 GEHHSAAVTEDGELLVWGRLD----------------------GGQLGLDPETLP----- 359
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
E+VV+ SG + +P V P +K + + G H + +S G
Sbjct: 360 -AEDVVRD-------------VSGKPRYLSTPRAV---PDIKFSFIGCGTHHNIAISREG 402
Query: 232 QVWGWGYGGEGQLGLG 247
Q + WG+GG Q GLG
Sbjct: 403 QAYSWGFGGSYQTGLG 418
>gi|170101426|ref|XP_001881930.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643285|gb|EDR07538.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 533
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 45/155 (29%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV+AAAG + +TE+G+V++ FGSA E+
Sbjct: 167 VVQAAAGITFSIVLTESGKVFS---------------FGSA----------------EKG 195
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
+ GE ++ KT E + P + G KI ++A+G +HTL
Sbjct: 196 QLGNGTTGERIITGNKTGYDIE-------------VQPVYLKELDGKKIVQIASGQQHTL 242
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L G V+ WGY G +LGLG+++ + P ++P
Sbjct: 243 ALDSTGLVYVWGYNGYCRLGLGNQVDAL-KPKVVP 276
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 59 GCGFALATSESGKLITWGSADD-------EGQSYLTSGKHGETPEPFPLPTE----ASVV 107
G F++ +ESGK+ ++GSA+ G+ +T K G E P+ + +V
Sbjct: 173 GITFSIVLTESGKVFSFGSAEKGQLGNGTTGERIITGNKTGYDIEVQPVYLKELDGKKIV 232
Query: 108 KAAAGWAHCVSVTEAGEVYTWGWR 131
+ A+G H +++ G VY WG+
Sbjct: 233 QIASGQQHTLALDSTGLVYVWGYN 256
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP-- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 71 ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 130
Query: 255 --TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------ 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 131 VKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 190
Query: 294 ------IACGGRHSAVVTD 306
I+CG H+AV+T+
Sbjct: 191 NLSVIYISCGYEHTAVLTE 209
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 4346 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMY-----------------DR 4388
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ + G V +IACGG HSA +T
Sbjct: 4389 PKLIEE-------LLGTEIV-DIACGGHHSAAIT 4414
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 109/292 (37%), Gaps = 70/292 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ GK+ +WG +D L G +P + + S + A G H ++T
Sbjct: 3353 ALALTQDGKIFSWGEGED---GKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3409
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
+GE+YTWG G G T Q Q+ G+ V+
Sbjct: 3410 SSGELYTWG-------------LGEYGRLGHGDTATQMKPKLVQS-----LVGQRVIQVA 3451
Query: 178 ---KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHT 224
+ +T + + + GD F +P L+ G+ + ++ G + +
Sbjct: 3452 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3511
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLVRQ-G 278
L L+ G+VW WG G +LG G+ V P L+ L H A G L V G
Sbjct: 3512 LALTKYGEVWTWGKGDYFRLGHGND-HHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTG 3570
Query: 279 SV-----NSSGKAGR-----------------SYVKEIACGGRHSA--VVTD 306
V N G+ G + V ++CG HS V+TD
Sbjct: 3571 QVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTD 3622
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
GD+ P L+ I KVA +GG+H L L+ G+++ WG G +G+LG G+ + +
Sbjct: 3322 GDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSL 3381
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
D+P L+ S K+ R +++IACG HSA +T
Sbjct: 3382 -----------------DKPRLIE------SLKSKR--IRDIACGSGHSAAIT 3409
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGW 113
G G + A + SG+L TWG + Y G HG+T P+ V++ A G
Sbjct: 3401 GSGHSAAITSSGELYTWGLGE-----YGRLG-HGDTATQMKPKLVQSLVGQRVIQVACGS 3454
Query: 114 --AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
A +++T G VY+WG + K+ R GS G + + + L Q +
Sbjct: 3455 RDAQTMALTADGSVYSWGDGDF---GKLGRG-GSDGCYTPLLIDRLNGLGVVQIECGAQF 3510
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + + + G++ P LV G K+ VA G H L ++D G
Sbjct: 3511 SLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTG 3570
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
QV+ WG GQ G GS I + P L+ L+ A
Sbjct: 3571 QVYAWGDNDHGQQGNGSTI-VNKKPSLVHELDDA 3603
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4512 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4570
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4571 CTDKGEVFTWG 4581
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ V+K
Sbjct: 4457 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4511
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4512 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4539
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + +D G
Sbjct: 4540 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4575
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4576 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4608
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD + P LV IT +A G ++ +LS G+++ WG G G+LG G+ +
Sbjct: 532 GDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNV-- 589
Query: 255 TPHLIPCLEHAASG 268
LIP L A +G
Sbjct: 590 ---LIPTLVTALNG 600
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 3871 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 3913
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ + G V +IACGG HSA +T
Sbjct: 3914 PKLIEE-------LLGTEIV-DIACGGHHSAAIT 3939
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+ I + D+
Sbjct: 2877 IKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISL-----------------DK 2919
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ S K+ R +++IACG HSA +T
Sbjct: 2920 PRLIE------SLKSKR--IRDIACGSGHSAAIT 2945
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 18/218 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGW 113
G G + A + SG+L TWG + Y G HG+T P+ V++ A G
Sbjct: 2937 GSGHSAAITSSGELYTWGLGE-----YGRLG-HGDTATQSKPKLVQSLVGQRVIQIACGS 2990
Query: 114 --AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
A +++T G VY+WG + K+ R GS G + + + L Q +
Sbjct: 2991 RDAQTMALTADGLVYSWGDGDF---GKLGRG-GSDGCYTPLLIDRLNGLGVVQIECGAQF 3046
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + + + G++ P LV G KI VA G H L ++D+G
Sbjct: 3047 SLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIG 3106
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
QV+ WG GQ G G+ I + P L+ L+ A +
Sbjct: 3107 QVYAWGDNDHGQQGNGTTI-VNKKPSLVHELDDARVNR 3143
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A + SG + TWG D + T H P ++ A G HCV+
Sbjct: 4037 GSQFSVALTRSGAIYTWGKGDYHRLGHGTD-DHVRRPRKVAALQGKKIISIATGSLHCVA 4095
Query: 119 VTEAGEVYTWG 129
T+ GEV+TWG
Sbjct: 4096 CTDKGEVFTWG 4106
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ V+K
Sbjct: 3982 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVIKVEC 4036
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4037 GSQFSVALTRSGAIYTWG----------------KGDYHRLGHG---------------- 4064
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + +D G
Sbjct: 4065 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACTDKG 4100
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4101 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4133
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 100/249 (40%), Gaps = 37/249 (14%)
Query: 18 KETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSE 68
+ + VY+WG L G S K P+ S + ++L K V GG S+
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSEVLSKL------KPVHIAGGSKTLFVVSQ 2840
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVY 126
GKL G + G+ L + P+P P ++ + K A +G H +++T+ G+V+
Sbjct: 2841 EGKLYACGEGTN-GRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899
Query: 127 TWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
+WG E G S D +L +++ +G TSS
Sbjct: 2900 SWGEGE-------DGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAA---ITSSGE 2949
Query: 187 E------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGY 238
E GD P LV G ++ ++A G R T+ L+ G V+ WG
Sbjct: 2950 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGD 3009
Query: 239 GGEGQLGLG 247
G G+LG G
Sbjct: 3010 GDFGKLGRG 3018
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 99/269 (36%), Gaps = 46/269 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG---ETPEPFPLPTEASVVK----AAA 111
G ++A S G+L +WG T G+ G E P P A V K A
Sbjct: 192 GAQHSMALSNYGELYSWGCG--------TGGRTGHGSEAPSLSPQVVSALVGKQITSMAG 243
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H + G VYTWGW + +G G ++T K+ P +
Sbjct: 244 GMLHSAATDLRGSVYTWGWNK----------YGQLG----NNTAKKHLSPNKLRDMEKHH 289
Query: 172 AGEEVVKRRKTSSAREESENPASGDEF--------FTLSPCLVTLNPGVKITKVAAGGRH 223
+ + T E + G + S ++ + +G H
Sbjct: 290 VVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVDLPEHAVDIVSGYYH 349
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
TL L++ G V+ WGY +G LGLG P LIP L H + S+ S
Sbjct: 350 TLCLTNKGNVYSWGYMSDGALGLGDIAGHQSKPKLIP-LSHIRHNYSDS-MDSYNSIYES 407
Query: 284 GKAGRS--YVK-----EIACGGRHSAVVT 305
G G + Y K +IA G +SA++T
Sbjct: 408 GGEGTNPRYAKGDVAEKIAAGAWNSAIIT 436
>gi|449447436|ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 85/231 (36%), Gaps = 55/231 (23%)
Query: 95 PEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ F P E + + A G H +V G ++TWG DFG G D
Sbjct: 49 PDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV------ 206
T ++S LP + + T++ E EN TLS C +
Sbjct: 95 GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDG------TLSTCRLWIWGQN 148
Query: 207 -----------TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
P I +V+ G H + LSD GQ+ WGY GQLG G + +
Sbjct: 149 QGSNFPRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQG 208
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+I A + P LV + +++CG HSA +++
Sbjct: 209 ARIINAF--AKFLDEAPELVT--------------ITKVSCGEYHSAAISE 243
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 125/322 (38%), Gaps = 75/322 (23%)
Query: 18 KETVVYMWGY-LPGTSPEK------------SPILSPIPARLCGGDSWKDVCGGGCG--F 62
+++ +Y+WGY G + K P L P + W D+ CG
Sbjct: 17 RKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEI--NSRWLDI---ACGREH 71
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL-PTEASVVKAAAGWAHCVS-VT 120
A + G L TWG A+D GQ L G ++ P + + VK+ + AHC + +
Sbjct: 72 TAAVASDGSLFTWG-ANDFGQ--LGDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIA 128
Query: 121 EAGE---------VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ-SALPTEQAPPSDK 170
E E ++ WG + + R F G+F + +Q S SD
Sbjct: 129 EPRENDGTLSTCRLWIWGQNQ---GSNFPRLF--WGAFTPQTIIRQVSCGAVHVVALSDD 183
Query: 171 RAGEE-------VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ + R TS + + + +F +P LVT ITKV+ G H
Sbjct: 184 GQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVT------ITKVSCGEYH 237
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+ +S+ G+V+ WG G GQLG S LIP R ++ G
Sbjct: 238 SAAISENGEVYTWGLGSMGQLGHCSL--QSADKELIP----------RRVVALDGIC--- 282
Query: 284 GKAGRSYVKEIACGGRHSAVVT 305
VK+IACGG H+ +T
Sbjct: 283 -------VKDIACGGVHTCAIT 297
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 107/288 (37%), Gaps = 97/288 (33%)
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHG-ETPEPFP-----LPTEASVVKAAAGWA 114
+A S+ G+L WG + G+ + G G F P ++ K + G
Sbjct: 177 VVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEY 236
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++E GEVYTWG GS G S + A +
Sbjct: 237 HSAAISENGEVYTWG-------------LGSMGQL---------------GHCSLQSADK 268
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E++ RR +V L+ G+ + +A GG HT ++ G ++
Sbjct: 269 ELIPRR------------------------VVALD-GICVKDIACGGVHTCAITQNGSLY 303
Query: 235 GWGYGGEG------QLGLGSRI--------KMVPTPHLIPCLEHAASGKDRPLL-VRQGS 279
WG G G Q G S I + +P + ++H A G L+ + G
Sbjct: 304 AWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGR 363
Query: 280 V-----NSSGKAGR---SY-------------VKEIACGGRHSAVVTD 306
+ NS G+A +Y V+++A GG HSAV+TD
Sbjct: 364 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 411
>gi|146185478|ref|XP_001031903.2| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|146143053|gb|EAR84240.2| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1349
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 23/104 (22%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L + + I +V G +H++ LS GQV+ WG G EGQLG + ++ + TP +I
Sbjct: 1007 PILANIPQTIPIVQVVCGWQHSMALSSSGQVYSWGLGEEGQLG-HNDMETLNTPKMIEYF 1065
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
A +K I+CG HSA +++
Sbjct: 1066 SQQA----------------------KQIKYISCGHSHSAAISE 1087
Score = 43.5 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
++G+L WG + GQ +S + P +P +V+ GW H ++++ +G+VY+
Sbjct: 981 QTGELYLWGKGN-SGQLGNSSFNSSKVPILANIPQTIPIVQVVCGWQHSMALSSSGQVYS 1039
Query: 128 WGWRE 132
WG E
Sbjct: 1040 WGLGE 1044
Score = 40.8 bits (94), Expect = 0.70, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 22 VYMWGYLPGTSPE---------KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKL 72
+Y+WG G S + K PIL+ IP + + VCG ++A S SG++
Sbjct: 985 LYLWG--KGNSGQLGNSSFNSSKVPILANIPQTI---PIVQVVCG--WQHSMALSSSGQV 1037
Query: 73 ITWGSADDEGQSYLTSGKHGETPEPFP-LPTEASVVK-AAAGWAHCVSVTEAGEVYTWG 129
+WG + EGQ + TP+ +A +K + G +H +++E G++YTWG
Sbjct: 1038 YSWGLGE-EGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEGDLYTWG 1095
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 31/138 (22%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP--- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 115 SFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKV 174
Query: 255 -TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------- 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKN 234
Query: 294 -----IACGGRHSAVVTD 306
I+CG H+AV+T+
Sbjct: 235 LSVIYISCGYEHTAVLTE 252
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 79/207 (38%), Gaps = 33/207 (15%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
G +A G + WG +D GQ L G P + + VV AAG H
Sbjct: 231 IAAGAYHTVALKNDGTVWAWG-WNDCGQ--LGDGTTTNRTIPVQVKGISDVVAIAAGMYH 287
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS------ALPTEQAPPSD 169
V++ G V+ WG E D G ++ + P + SD
Sbjct: 288 TVALKNDGTVWAWGDNE------------------HDQLGNETTKEEYHSTPVQVKGISD 329
Query: 170 KRAGEE------VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A V+K T A +E GD S V +N + +AAG H
Sbjct: 330 VKAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYH 389
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRI 250
T++L + G VW WGY G+LG G+ +
Sbjct: 390 TVVLKNDGTVWTWGYNHYGELGNGTTV 416
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 82/211 (38%), Gaps = 54/211 (25%)
Query: 107 VKA-AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VKA AAG H V++ G V+ WGW +C G G D T +P +
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDC----------GQLG----DGTTTNRTIPVQVK 273
Query: 166 PPSDKRA------GEEVVKRRKTSSAREESENPASGDEF----FTLSPCLVTLNPGVKIT 215
SD A +K T A ++E+ G+E + +P V VK
Sbjct: 274 GISDVVAIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVK-- 331
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+AAG +T++L + G VW WG G+LG G+ + P+ V
Sbjct: 332 AIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGT-----------------TNNSFTPVQV 374
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G S VK IA G H+ V+ +
Sbjct: 375 N----------GISNVKAIAAGAYHTVVLKN 395
>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 33/223 (14%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP 101
+P R+ G K + G C F+LA E+GK+ WG GQ L +G + P +
Sbjct: 175 VPDRVQGMPKVKQISAG-CDFSLALLENGKVYAWGRG-IHGQ--LGTGNRATSSVPRQVQ 230
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
++V+ AG H +++T V +WG+ +G G +S+ K S LP
Sbjct: 231 GLENIVEIDAGCYHALALTADDTVKSWGYNL----------YGQLG----NSSTKSSTLP 276
Query: 162 TEQ---APPSDKRAG--EEVVKRRKTSS---AREESENPASGDEFFTLSPCLVTLNPGVK 213
+ SD AG VK + + DE F + V+
Sbjct: 277 VDVDWIEGVSDIEAGAFHNYVKTSDSHVWGWGNNQYGQLLESDEAFDANVSRTNRTAPVE 336
Query: 214 ITK------VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
I + +AAG RH + ++ V+ WG+ GEGQLG G+ +
Sbjct: 337 IPRLEGVQHLAAGARHGVAVT-ADDVFTWGHNGEGQLGNGTTV 378
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI---PCLEHAASGKD 270
I VAAGG+H L L GQV+ WG GQLG P + P ++ ++G D
Sbjct: 134 IKDVAAGGKHALALDTSGQVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMPKVKQISAGCD 193
Query: 271 RPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
L L+ G V + GR ++ G R ++ V
Sbjct: 194 FSLALLENGKVYA---WGRGIHGQLGTGNRATSSV 225
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP-- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 41 ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 100
Query: 255 --TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------ 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 101 VKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 160
Query: 294 ------IACGGRHSAVVTD 306
I+CG H+AV+T+
Sbjct: 161 NLSVIYISCGYEHTAVLTE 179
>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 388
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECV-PSAKVTRDFGSAGSFQKDSTGKQSALP 161
+ V + +A H +++ G+ ++WG C P + + S+ SF+K + G AL
Sbjct: 205 DVEVTRISANGDHSAAISADGQFFSWGRGFCAGPDVQTPQCLPSSLSFRKVAVGWNHALL 264
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
EV K T + + E + L+ V+ GVK+ ++AAG
Sbjct: 265 L--------TVDGEVFKLGNTLNKQPEKQQLQIDSSEALLAK--VSDFDGVKVLQIAAGA 314
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
H+ +++ G+V WG+G GQLGLG+ +P L+
Sbjct: 315 EHSAAVTENGKVKTWGWGEHGQLGLGNTNDQT-SPQLV 351
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 31/133 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L++L I+ +A GG H + L+ G+V+ WG G GQLG G I + P L+
Sbjct: 37 LLPQLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRGSSGQLGHGD-ILNITLPKLVS 95
Query: 261 CLE------------HAASGKDRPLLVRQGSVNSSGKAGR------------SY-----V 291
+ H+ D L G+ S G+ G SY V
Sbjct: 96 FFDGYVITQAAAGWSHSGFVSDSGCLFTCGN-GSFGQLGHGDNMSLRTPAKVSYFSNESV 154
Query: 292 KEIACGGRHSAVV 304
K +ACG RHS V+
Sbjct: 155 KMVACGMRHSLVL 167
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 77/207 (37%), Gaps = 26/207 (12%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
E ++ +WG+ D GQ + P+ L + S+ A G AH +++T G+V+T
Sbjct: 13 EEQQVWSWGAGTD-GQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGKVFT 71
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP----------TEQAPPSDKRAGEEVV 177
WG GS+G LP QA +G
Sbjct: 72 WGR-------------GSSGQLGHGDI-LNITLPKLVSFFDGYVITQAAAGWSHSGFVSD 117
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
+ GD +P V+ + VA G RH+L+L QV G+G
Sbjct: 118 SGCLFTCGNGSFGQLGHGDNMSLRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFG 177
Query: 238 YGGEGQLGLGSR-IKMVPTPHLIPCLE 263
G GQLG S K V P ++ L+
Sbjct: 178 SGKRGQLGFTSDGTKSVNLPCVVSGLK 204
>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 411
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 92/250 (36%), Gaps = 41/250 (16%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAH 115
GG +L G + WG + GQ G P F + + VV AAGW H
Sbjct: 43 GGGSHSLVLKPDGTVWAWG-GNHAGQL----GDGTTNPRKFAIQVKGLEDVVSIAAGWEH 97
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
++V G V+ WG FG G D T + P + D +
Sbjct: 98 NLAVKSDGTVWAWG----------NNRFGQLG----DGTNENRNTPVKVKTIKDVTEIDA 143
Query: 176 VVKRRKTSSA--------REESENPASGDEFFTLSPCLVT-LNPGVKITKVAAGGRHTLI 226
+ E + G + P V LN + V+ G H L+
Sbjct: 144 GFYHSIALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLN---NVVAVSGGNHHNLV 200
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIK-MVPTP-HLIPCLEHAASGKDRPLLVR-QGSV--- 280
L G +WGWG G GQLG G+ + +PTP + ASG + + V+ GS+
Sbjct: 201 LKADGTIWGWGANGYGQLGDGTMTESSIPTPVYDFNGAVFIASGNNYNVAVKADGSIWGW 260
Query: 281 --NSSGKAGR 288
N+ G+ G
Sbjct: 261 GMNTYGQLGN 270
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 34/236 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG L G + WG+ G L G E+ P P+ V A+G + V
Sbjct: 193 GGNHHNLVLKADGTIWGWGA---NGYGQLGDGTMTESSIPTPVYDFNGAVFIASGNNYNV 249
Query: 118 SVTEAGEVYTWGWRE-------CVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
+V G ++ WG ++K+ + +TG AL +Q
Sbjct: 250 AVKADGSIWGWGMNTYGQLGNGTQTNSKIPIRINGLNNSVSIATGGYHALILQQ------ 303
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ V + + S ++ TL ++ + +AAG H+L L
Sbjct: 304 ---DGTVLSMGYNRTGQLGTGATSNYQYTTLKVHGLS-----DVVSIAAGYYHSLALKKD 355
Query: 231 GQVWGWGYGGEGQLGLG----------SRIKMVPTPHLIPCLEHAASGKDRPLLVR 276
G +W WG GQLG G S+IK+ T P + A++ P LV+
Sbjct: 356 GTIWAWGNNEYGQLGDGTLNYKKLPILSQIKLDQTITPAPKEDSASANTPIPTLVK 411
>gi|444911273|ref|ZP_21231448.1| hypothetical protein D187_02792 [Cystobacter fuscus DSM 2262]
gi|444718031|gb|ELW58847.1| hypothetical protein D187_02792 [Cystobacter fuscus DSM 2262]
Length = 476
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 93/229 (40%), Gaps = 27/229 (11%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A G+L TWG +D GQ L G TP P P+P A V AG + + + E G
Sbjct: 134 AALRDGQLFTWG-GNDAGQ--LGRPDAGNTPHPLPVPGLAPVRAVVAGPSSTLVLLEEGG 190
Query: 125 VYTWGW--RECVPSAK---VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
+ WG R VP+ K S G + G AL + V
Sbjct: 191 AWAWGTLPRGLVPARKEPSTPTRVESPGPVVDVALGASHAL---------LLLADGTVLA 241
Query: 180 RKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
+++ + + E T P L I +VA G H++ L G V+ WG
Sbjct: 242 VGSNTKGQLGLGSTAPVEAPTRVPGLS------DIVRVAVGTAHSVALRRDGTVFTWGDN 295
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGR 288
G+GQLG G ++ TPH P LE A G+ + +G V + G GR
Sbjct: 296 GDGQLGNG---ELDATPHPEP-LEVAHLGQVVDIATGRGHVLALGADGR 340
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 78/217 (35%), Gaps = 31/217 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
G ++A G + TWG D G L +G+ TP P PL VV A G H
Sbjct: 276 GTAHSVALRRDGTVFTWG---DNGDGQLGNGELDATPHPEPLEVAHLGQVVDIATGRGHV 332
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK--QSALPTEQAPPSDKRAGE 174
+++ G V WG G +G +G A P + +D A
Sbjct: 333 LALGADGRVRAWG-------------LGMSGQLGHGKSGMLGSRAQPVDVLDVTDAVAVS 379
Query: 175 EV------VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + T A ++ N GD P + + + VAAG HTL +
Sbjct: 380 ALNNVGFALSASGTLWAWGQNSNAQLGDGSLAERPRPIQVQGLGPVRAVAAGSLHTLACT 439
Query: 229 DMGQVWGWGYGGEGQLGL-----GSRIKMVPTPHLIP 260
G WG +GQLG GS P P + P
Sbjct: 440 RDGDCLAWGANHDGQLGASTPSEGSPRSPTPLPVVFP 476
>gi|308505000|ref|XP_003114683.1| hypothetical protein CRE_28429 [Caenorhabditis remanei]
gi|308258865|gb|EFP02818.1| hypothetical protein CRE_28429 [Caenorhabditis remanei]
Length = 174
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
F++ P V+L GV+I ++AAG H++ ++D G+V+ WG GQLG+ S + TP
Sbjct: 83 FSIYP--VSLTSGVEIVQIAAGRAHSVAVADDGRVFAWGSNEHGQLGMESSVVWQETPKR 140
Query: 259 IPCLE---HAASGKDRPLLVRQGSVNSSGKAGRSY 290
I L ASG D + + AGR +
Sbjct: 141 IKELNEVVQVASGSDHCIALTD-DFQEKAAAGRDF 174
>gi|46123841|ref|XP_386474.1| hypothetical protein FG06298.1 [Gibberella zeae PH-1]
Length = 605
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 52/242 (21%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
F A +E G L+ WG G + + P P T ++K ++++
Sbjct: 169 FGAAVTEKGDLVQWGL-----------GYNQKDPSPVSTLTGKDIIKIDVSLDRIIALSR 217
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS------TGKQSALPTEQAPPSDKRAGEE 175
G VY+ +P+++ ++ G QK S G + + PS GE
Sbjct: 218 KGNVYS------IPASRNDQEGGLKEEQQKSSWSIWGSGGSRENIHFRNLTPSSLAYGET 271
Query: 176 V--------------VKRRKTSSAREESENPASGDEFFT-LS-----------PCLVTLN 209
V K R S+A E P+ G LS P VT
Sbjct: 272 VKDISTGQEHCLMLTSKGRVFSAAASALEFPSKGQMGVAGLSWHNRPKGPYDQPHEVTTL 331
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--IKMVPTPHLIPC-LEHAA 266
G ++T++AAG H+ +L G+++G+G GQLG+ + + + TP ++P L +A
Sbjct: 332 QGFEVTQIAAGDYHSAVLDKTGRIFGFGDNSYGQLGIDTDYGLSVSDTPVMVPTNLSYAN 391
Query: 267 SG 268
+G
Sbjct: 392 TG 393
>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
niloticus]
Length = 1384
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 25/93 (26%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+T+V GG HT++L++ V+ +G G GQLG G+ + V HL L+H + K
Sbjct: 246 VTRVCCGGEHTVVLTEKN-VYTFGRGQYGQLGHGTFLFEV---HLPKALQHFCNSK---- 297
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
V+ IACG H+AVVTD
Sbjct: 298 -----------------VRHIACGENHTAVVTD 313
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA 114
+ GC + A +E G+L WG D + G G EP + +V+ + G+
Sbjct: 145 MLSAGCNTSAALTEDGRLFMWG---DNSVGQIAFGDEGFAAEPREVHVGEAVIWVSCGYK 201
Query: 115 HCVSVTEAGEVYTWG 129
H VT G +YT+G
Sbjct: 202 HSAFVTVYGRLYTFG 216
>gi|258577767|ref|XP_002543065.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903331|gb|EEP77732.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 577
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 42/208 (20%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST--GKQSALPTE 163
VV+ A G HCV++T ++ TWG + G+ +D+T GK +
Sbjct: 175 VVQIATGGMHCVALTHDNKILTWGVND-------------QGALGRDTTWEGKLKDIDAG 221
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ + +++ +++ G F +VAAG
Sbjct: 222 SDDDDSDADSDSGLNPKESIPTEIPTDSFPEGTVFV----------------EVAAGDSS 265
Query: 224 TLILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGKDRPL-LVRQ 277
+ L+D G+V+GWG G EG LG + ++ TP LIP L +H A G + L L +
Sbjct: 266 SFALTDDGRVYGWGTFRGNEGILGFDATNRVQATPALIPSLKKIQHIACGDNHALALDVK 325
Query: 278 GSVNSSG-----KAGRSYVKEIACGGRH 300
G+V + G + GR V+ G H
Sbjct: 326 GAVFAWGSGQQNQLGRRIVERTKLNGLH 353
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 52/203 (25%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-----TPEPFPLPTEAS 105
K++ GCG + A +SGK+ +WG + G++ + G + PE ++
Sbjct: 361 KNITHIGCGAFHSFAIHQSGKVYSWG-LNSYGETGIPQGAGSDEAVVLRPEVVKSLSDKD 419
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V++ G H ++VT GE WG + G Q+ L E
Sbjct: 420 VIQLCGGSHHSLAVTREGECLAWGRVD----------------------GFQTGLNVETL 457
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P EE V + AR S +P + P +K VAAG H++
Sbjct: 458 P-------EESVIKDDRGRARILS------------TPTAI---PDIKAKFVAAGADHSI 495
Query: 226 ILSDMGQVWGWGYGGEGQLGLGS 248
++ G+ W WG+ Q G G+
Sbjct: 496 AIAQDGRAWSWGFSANYQTGQGT 518
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP-- 254
+ P + G+KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P
Sbjct: 114 ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 173
Query: 255 --TPHLIPCLEHAASGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------ 293
+ IP + AA G L G+ N SG+ S VKE
Sbjct: 174 VKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK 233
Query: 294 ------IACGGRHSAVVTD 306
I+CG H+AV+T+
Sbjct: 234 NLSVIYISCGYEHTAVLTE 252
>gi|449447434|ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 85/231 (36%), Gaps = 55/231 (23%)
Query: 95 PEPFPLPTEASV--VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P+ F P E + + A G H +V G ++TWG DFG G D
Sbjct: 49 PDLFGCPGEINSRWLDIACGREHTAAVASDGSLFTWG----------ANDFGQLG----D 94
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLV------ 206
T ++S LP + + T++ E EN TLS C +
Sbjct: 95 GTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDG------TLSTCRLWIWGQN 148
Query: 207 -----------TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
P I +V+ G H + LSD GQ+ WGY GQLG G + +
Sbjct: 149 QGSNFPRLFWGAFTPQTIIRQVSCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQG 208
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+I A + P LV + +++CG HSA +++
Sbjct: 209 ARIINAF--AKFLDEAPELVT--------------ITKVSCGEYHSAAISE 243
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 125/322 (38%), Gaps = 75/322 (23%)
Query: 18 KETVVYMWGY-LPGTSPEK------------SPILSPIPARLCGGDSWKDVCGGGCG--F 62
+++ +Y+WGY G + K P L P + W D+ CG
Sbjct: 17 RKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEI--NSRWLDI---ACGREH 71
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL-PTEASVVKAAAGWAHCVS-VT 120
A + G L TWG A+D GQ L G ++ P + + VK+ + AHC + +
Sbjct: 72 TAAVASDGSLFTWG-ANDFGQ--LGDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIA 128
Query: 121 EAGE---------VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ-SALPTEQAPPSDK 170
E E ++ WG + + R F G+F + +Q S SD
Sbjct: 129 EPRENDGTLSTCRLWIWGQNQ---GSNFPRLF--WGAFTPQTIIRQVSCGAVHVVALSDD 183
Query: 171 RAGEE-------VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+ + R TS + + + +F +P LVT ITKV+ G H
Sbjct: 184 GQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVT------ITKVSCGEYH 237
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+ +S+ G+V+ WG G GQLG S LIP R ++ G
Sbjct: 238 SAAISENGEVYTWGLGSMGQLGHCSL--QSADKELIP----------RRVVALDGIC--- 282
Query: 284 GKAGRSYVKEIACGGRHSAVVT 305
VK+IACGG H+ +T
Sbjct: 283 -------VKDIACGGVHTCAIT 297
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 107/288 (37%), Gaps = 97/288 (33%)
Query: 63 ALATSESGKLITWGSAD--DEGQSYLTSGKHG-ETPEPFP-----LPTEASVVKAAAGWA 114
+A S+ G+L WG + G+ + G G F P ++ K + G
Sbjct: 177 VVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEY 236
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++E GEVYTWG GS G S + A +
Sbjct: 237 HSAAISENGEVYTWG-------------LGSMGQL---------------GHCSLQSADK 268
Query: 175 EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
E++ RR +V L+ G+ + +A GG HT ++ G ++
Sbjct: 269 ELIPRR------------------------VVALD-GICVKDIACGGVHTCAITQNGSLY 303
Query: 235 GWGYGGEG------QLGLGSRI--------KMVPTPHLIPCLEHAASGKDRPLL-VRQGS 279
WG G G Q G S I + +P + ++H A G L+ + G
Sbjct: 304 AWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGR 363
Query: 280 V-----NSSGKAGR---SY-------------VKEIACGGRHSAVVTD 306
+ NS G+A +Y V+++A GG HSAV+TD
Sbjct: 364 IHGWGYNSYGQAANEKSTYAWYPSPVDWCVGEVRKLAAGGGHSAVLTD 411
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 25/112 (22%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD + + P L+T + ++ G HTL L++ GQV+ WG+G GQLGLG+ +
Sbjct: 911 GDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGN----ID 966
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L C+ H KD+ +K+IA G HS V++D
Sbjct: 967 DQRLPVCVNHL---KDQ------------------VIKDIAAGHGHSLVLSD 997
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 18/92 (19%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I +AAG H+L+LSD GQ++ +G G GQLG G+ K +P L S ++ +
Sbjct: 982 IKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSS-----VPVLIQGIS--EKII 1034
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
L+ G Y I+CG HSA++T
Sbjct: 1035 LIATG-----------YFHSISCGCHHSALLT 1055
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 28/140 (20%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
SG E +T P + ++I +VA G H+L LS +V+ WG GQLGLG K
Sbjct: 119 SGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQ 178
Query: 254 PTPHL------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE---- 293
+P + IP + AA G +L G+V N G+ G + YV
Sbjct: 179 ASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 294 --------IACGGRHSAVVT 305
I+CG H+A +T
Sbjct: 239 LRSQKIVYISCGEDHTAALT 258
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASG 268
I V+ G HTL L+D GQV+ WG+ +GQLGL + P I L A G
Sbjct: 86 IVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACG 145
Query: 269 KDRPLLVRQGS------VNSSGKAGRSY------------------VKEIACGGRHSAVV 304
L + +GS N G+ G Y +IA GG HS V+
Sbjct: 146 YFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVL 205
Query: 305 T 305
T
Sbjct: 206 T 206
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 44/252 (17%)
Query: 60 CGFA--LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG A LA ++ G++ WG A D + ++ P ++ +V+ A G+ H +
Sbjct: 91 CGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSL 150
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAG---SFQKDSTGK--QSAL--PTEQAPPSDK 170
++++ EV++WG + +G G ++K ++ + +S L P Q
Sbjct: 151 ALSKGSEVFSWGQNK----------YGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGA 200
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ + R + DE P L+ KI ++ G HT L+
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G V+ +G GG GQLG S T H I R + G++
Sbjct: 261 GGVFTFGAGGYGQLGHNS------TAHEI---------NPRKVFELMGNI---------- 295
Query: 291 VKEIACGGRHSA 302
V +IACG +H++
Sbjct: 296 VTQIACGRQHTS 307
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 27/107 (25%)
Query: 201 LSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P L+ + I KVA +GG+H L LS G+V+ WG G +G+LG G++
Sbjct: 4042 LTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNK--------- 4092
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+G D P L+ G+ V +IACGG HSA VT
Sbjct: 4093 --------NGCDHPQLI-------DALQGKEIV-DIACGGAHSAAVT 4123
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVK 108
VC CG F+LA ++ G++ TWG D Y G +H P +E +V
Sbjct: 3232 VCMIECGAQFSLALTKFGQVYTWGKGD-----YFRLGHGSDQHVRKPTLVESLSEKKIVH 3286
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC+ T+ G+VY WG
Sbjct: 3287 VAVGALHCLCATDQGQVYAWG 3307
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 87/250 (34%), Gaps = 90/250 (36%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ VVK
Sbjct: 4166 CGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESLAGLGVVKVEC 4220
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4221 GSQFSVALTRSGSVYTWG----------------KGDYHRLGHG---------------- 4248
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+E V+ K +A + G KI +A G H + SD+G
Sbjct: 4249 -SDEHVRHPKKIAALQ-----------------------GKKIICIATGSLHCVACSDLG 4284
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
+V+ WG EGQLG G+ + + P L+ L+ GK+ +
Sbjct: 4285 EVFTWGDNDEGQLGDGT-MNAIHRPRLVVTLQ----GKN--------------------I 4319
Query: 292 KEIACGGRHS 301
+ACG HS
Sbjct: 4320 NRVACGSAHS 4329
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 29/107 (27%)
Query: 202 SPC-LVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+PC L +LN V I KVA +GG+H + L+ G+V+ WG G +G+LG +R+ +
Sbjct: 3060 TPCQLTSLNQYV-IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSL------ 3112
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
DRP ++ + K+ R +++IACG HSA ++
Sbjct: 3113 -----------DRPKMIE------ALKSKR--IRDIACGSSHSAAIS 3140
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 85/215 (39%), Gaps = 10/215 (4%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA 110
K+V CG ++ A + SG++ TWG + + TS H P + +V A
Sbjct: 573 KNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDH-TVPTLVVGLKDYFIVDIA 631
Query: 111 --AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
+G A ++VT G V++WG D GS K + +
Sbjct: 632 CGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSD----GSKTPKLIEKLQDIEVARVYCG 687
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
+ + + + ++ G E P LV G I KVA G H L L+
Sbjct: 688 SQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALT 747
Query: 229 DMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
D G+V+GWG GQ+G S V P L+ L+
Sbjct: 748 DDGEVYGWGRNDNGQVGETSETN-VSEPTLLTLLQ 781
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
LA S GK+ +WG DD + K+G + P+ +V A G AH +VT
Sbjct: 4068 LALSTDGKVYSWGEGDDGKLGH--GNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAG 4125
Query: 123 GEVYTWG 129
GE+YTWG
Sbjct: 4126 GEIYTWG 4132
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LV KI VA G H L +D GQV+ WG GQ G G+ I + P L+ L
Sbjct: 3273 PTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGT-ILVNRKPSLVLNL 3331
Query: 263 E 263
E
Sbjct: 3332 E 3332
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 59/154 (38%), Gaps = 28/154 (18%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ-- 164
V +G HC++++ G+VY+WG D G G K+ + Q
Sbjct: 4058 VAVNSGGKHCLALSTDGKVYSWG----------EGDDGKLGHGNKNGCDHPQLIDALQGK 4107
Query: 165 ---------APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
A + AG E+ K R GD + P LV G K+
Sbjct: 4108 EIVDIACGGAHSAAVTAGGEIYTWGKGRYGR-----LGHGDSEDQMKPKLVETLIGFKVI 4162
Query: 216 KVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+A +G TL ++D VW WG G G+LG G
Sbjct: 4163 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4196
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLG 247
GD L P LV G I +VA G R TL LS G V+ WG G G+LG G
Sbjct: 3159 GDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG 3213
>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
Length = 1812
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 203 PCLVTLNP--GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV-PTP 256
P LV L K+T VAAG H L+L D ++W WG+ G+GQLG G+R + P P
Sbjct: 1527 PVLVDLASLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLP 1583
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 195 GDEFFTLSPCLVTLNP--GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G + P LV L P G K+ V+AG HT+ L + G +W WG G+LG GS
Sbjct: 1629 GTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGS 1684
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 203 PCLVTLNP--GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
P V L P G K+ V+AG + ++ D G++W WG GQLG G++ +
Sbjct: 1745 PVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLGDGTKTR 1795
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 203 PCLVTLNP--GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
P V L P G +T V AG H++IL D+G++W WG G+LG G+
Sbjct: 1583 PIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGT 1630
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 27/110 (24%)
Query: 203 PCLVTLNP--GVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
P L L P G + ++ +G + + D G++W WGY G LG G+ I
Sbjct: 1471 PVLTDLTPLGGSTVVSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGID------- 1523
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMS 308
++RP+LV S+ G S V +A G H+ V+ D S
Sbjct: 1524 ----------RNRPVLVDLASL------GSSKVTAVAAGRYHNLVLDDQS 1557
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
++AAG H+LIL + ++W WG+ +G LG G+
Sbjct: 1431 NRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTN 1465
>gi|170072879|ref|XP_001870278.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869335|gb|EDS32718.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1203
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+I +AAGG + L L++ G V+ WGY G LG G + P P LIP
Sbjct: 1027 RIVDIAAGGSYCLALNEAGDVFAWGY---GILGFGPEVVHQPRPRLIPA----------- 1072
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L + N + S V+ I CG HS +TD
Sbjct: 1073 TLFGRNDFNPT-----SRVRAIYCGLTHSGAITD 1101
>gi|405977937|gb|EKC42361.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 950
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 22 VYMWGYLPGTSPEKSPILSP--IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSAD 79
V+MWGY G + ILSP +P + + GG +LA S SG + WGS
Sbjct: 234 VFMWGYGKGCGNKNKDILSPEKVPLKRKVVE-----VSGGATHSLALSGSGNIYVWGSGL 288
Query: 80 DEGQSYLTSGKHGETPEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWG 129
D S P+ P SVVK AG + ++TE+G ++ WG
Sbjct: 289 DGQLGLGNSNTFQSFPKKLKHPELRRSVVKIQAGEYYSTAITESGSLFIWG 339
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCL 262
L + PG ++ VA G HT++++D +++ WG G GQLG + ++ P
Sbjct: 42 LLKEILPG-QVKFVACGASHTILVNDSNEIYSWGNGNSGQLGTNVKELQWQP-------- 92
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
+R L V AG +ACGGRHS V
Sbjct: 93 -------ERVHLYDNNPVTLPDVAG------VACGGRHSMV 120
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
LSP V L K+ +V+ G H+L LS G ++ WG G +GQLGLG+
Sbjct: 251 LSPEKVPLK--RKVVEVSGGATHSLALSGSGNIYVWGSGLDGQLGLGN 296
>gi|157129109|ref|XP_001661612.1| hypothetical protein AaeL_AAEL011344 [Aedes aegypti]
gi|108872360|gb|EAT36585.1| AAEL011344-PA [Aedes aegypti]
Length = 803
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 82/224 (36%), Gaps = 54/224 (24%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG--------------WRECVPSAKVTRD 142
P LP + + A AH V+V G V+TWG WR +
Sbjct: 411 PLQLPPTGKIRQIATNGAHFVAVMYDGSVFTWGEGNKGQLGHNALETWRHYPTKVDAIQR 470
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
+ G +TG L VV S S G++ L
Sbjct: 471 YNVVGV----ATGNGFTLFWTNLG---------VV----LSCGDNSSGCLGHGNQISLLV 513
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P +V ++I +VA G +H + LSD G ++ WG +G LGLG ++ + P
Sbjct: 514 PKIVQKLNNIRIRQVACGSQHVVALSDGGHLYTWGSSNDGALGLGKQMLVSTEP------ 567
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
R L++ Q N ++EI CG + ++T+
Sbjct: 568 --------RRLIISQMIQN---------IREIYCGPDCTVILTE 594
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 114/339 (33%), Gaps = 99/339 (29%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA + G+L TWG + K +P P +V+AA G HC++V +
Sbjct: 53 SLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDK 112
Query: 123 GEVYTWG---WRECVPSAKVTRDFGSAGSFQKD-----------------STGKQSALPT 162
G Y WG + +C + D A ++D + G S + T
Sbjct: 113 GRAYAWGGNEYGQCGEEPERKEDGTRA--LRRDIPIPQRCALKLKVRQVAAGGTHSVVLT 170
Query: 163 EQA---------PPSDKRAGEEVVKRRKTSSAR-----------------------EESE 190
++ PP D + V+ + R E
Sbjct: 171 QEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDVILWAWGNNEYG 230
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+GD P V + + +AAGG H+ L+ G+V+ WG G G+LG G
Sbjct: 231 QLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGFGDD- 289
Query: 251 KMVPTPHLIPCLEHAASGKD----------RPLLVRQGSVNSSGKA-------------- 286
+ H++P +G+D L R G + S G+
Sbjct: 290 ---KSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKVTTG 346
Query: 287 -----------------GRSYVKEIACGGRHSAVVTDMS 308
GR K +ACGGRH+ + + +
Sbjct: 347 HPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIAEWT 385
>gi|219128407|ref|XP_002184405.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404206|gb|EEC44154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 643
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 30/256 (11%)
Query: 22 VYMWGYLPGTSPEK-SPILSPIPARLCGGDSWKDVCGGGC--GFALATSESGKLITWGSA 78
VY G L G + P+ PIP + + + C G G A+ + +G G
Sbjct: 86 VYQTGTLHGVVYKTPVPVTIPIPRKCVEIAAGRHFCLGRMEGGLAVVSWGAGHFGQLGLG 145
Query: 79 DDEGQSYLTSGKHGETPEP------FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG--- 129
EG S +T TP P P + V++ A G H ++++ +G V+ WG
Sbjct: 146 HAEGNSQITF-----TPYPIVMQRLLPRVIGSPVLQVACGSWHGLALSASGRVWAWGSNR 200
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE--QAPPSDKRAGEEVVKRRKT----S 183
++C +T AGS + +P E + R+ + R + S
Sbjct: 201 TQQCGRKPTLT-----AGSNHAPTVLVPLPVPLEVMATQIAAGRSHSVAIARDQVYCWGS 255
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+A + N S +P LV + + VAA G HTL L++ G+V+ WG EGQ
Sbjct: 256 TAHGQCGN--SARRGGVTAPRLVEGLANLTVEHVAANGNHTLALTNGGRVFAWGSNAEGQ 313
Query: 244 LGLGSRIKMVPTPHLI 259
LG G P P +
Sbjct: 314 LGTGPACAAQPKPRHV 329
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 11 NEKMEECKETVVYMWGYLP---------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG 61
N + ++ +++WG G P S IL + A G D
Sbjct: 515 NRSLAVKEDNTLWVWGSSSLGDLGDGSTGAHPVPSSILDDVKAVAAGND----------- 563
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
++LA +G L WGS + GQ L G P P+ +VV AAA ++ +++
Sbjct: 564 YSLAVRNNGSLWAWGS-NSIGQ--LGDGSTTNRLTPVPVNGLENVVGAAASFSVSLALRS 620
Query: 122 AGEVYTWGWREC--------------------VPSAKVTRDFGSAGSFQKDST------- 154
G V+ WG V V G + + + D T
Sbjct: 621 DGTVWAWGLNSVGQLGDGSTINRSTPGPVGGLVHIVGVATSGGHSLALRNDGTVWAWGGN 680
Query: 155 --GKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-----REESENPASGDEFF-------- 199
G+ T P + +G VK + R+ A GD +
Sbjct: 681 HDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTT 740
Query: 200 --TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
L+P LV+ GVK +A+G H L L + G VW WG QLG G+R + TP
Sbjct: 741 TDRLTPVLVSGLSGVK--ALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQR-STPV 797
Query: 258 LIPCLEHA---ASGKDRPLLVRQ-GSV-----NSSGKAGRSYVK 292
+ L A+G++ + VR+ G+V N+SG+ G +
Sbjct: 798 QVRGLSDVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLD 841
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIK 251
GD T P V + I VAA H+L + D G VW WG GQLG G+ R+
Sbjct: 173 GDGTTTNRPVPVQVGGLSGIRAVAASSDHSLAVRDDGTVWAWGINSSGQLGDGTTNDRLT 232
Query: 252 MVPTPHLIPCLEHAASGKDRPLLVR-QGSV-----NSSGKAGRSYVKEIACGGR 299
V L ++ A+G L V G+V NSSG+ G + GR
Sbjct: 233 PVQVAGL-SSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGR 285
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWA 114
CG ++A + +G+L WGS D GQ L S E +P + + A+V A A G
Sbjct: 143 ACGLKHSIALTNNGELYAWGSNSD-GQLGLGSDTKMEL-KPKLVHSLAAVPIAFVACGGY 200
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-- 172
H + ++++G V+ WG FG G S + +P + + R
Sbjct: 201 HTIVISKSGAVFAWG----------RNTFGQLGL----SDIQNRNVPCQLRTLRNSRVCY 246
Query: 173 ---GEE-----VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
GEE + + G++ + P + G +T+++ G RHT
Sbjct: 247 AACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHT 306
Query: 225 LIL-SDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLI--PCLEHAASGKDRPLLVRQGSV 280
L L G+V+ WG GG GQ LG+RI + TP ++ P + + S ++ S
Sbjct: 307 LALVPSRGRVYAWGLGGAGQ--LGNRIAQNSTTPQVVFGPWVSPSGSS-----MINHDS- 358
Query: 281 NSSGKAGRSYVKEIACGGRHS-AVVT 305
+ S K VK I GG H A+VT
Sbjct: 359 HDSPKPTDCVVKHIFSGGDHCFAIVT 384
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 24/92 (26%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
I ++A G +H++ L++ G+++ WG +GQLGLGS KM P L+ L
Sbjct: 139 IVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVP------- 191
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ +ACGG H+ V++
Sbjct: 192 -----------------IAFVACGGYHTIVIS 206
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 74/296 (25%), Positives = 112/296 (37%), Gaps = 82/296 (27%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKH------GETPEPFPLPTEASVVKAA 110
CG + +A ++ G++ + G+ +D GQ G+ G P F KAA
Sbjct: 40 ACGDNYTIAVTKEGQVYSCGN-NDHGQLGQEKGRKRLQLISGIDPLAFR--------KAA 90
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G +H + V E G++++WG S + G T + P K
Sbjct: 91 CGSSHTLVVNEWGQLFSWG------------------SNVEGQLGLDRVSATIREPRMVK 132
Query: 171 RAGEEVVKR-----RKTSSAREESENPASG-----------DEFFTLSPCLVTLNPGVKI 214
G +++ + + + + E A G D L P LV V I
Sbjct: 133 TLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPI 192
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGK 269
VA GG HT+++S G V+ WG GQLGL S I+ P + L +AA G+
Sbjct: 193 AFVACGGYHTIVISKSGAVFAWGRNTFGQLGL-SDIQNRNVPCQLRTLRNSRVCYAACGE 251
Query: 270 D-RPLLVRQGSVNSSGKAGR-----------------------SYVKEIACGGRHS 301
+ L G V + G AG S V +I+CG RH+
Sbjct: 252 EFSVFLTMDGGVFTCG-AGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHT 306
Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 24/91 (26%)
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
K A G HTL++++ GQ++ WG EGQLGL + P ++ L
Sbjct: 88 KAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTL------------- 134
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
G + +IACG +HS +T+
Sbjct: 135 -----------GTKIIVQIACGLKHSIALTN 154
>gi|348676752|gb|EGZ16569.1| hypothetical protein PHYSODRAFT_498697 [Phytophthora sojae]
Length = 664
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 63/178 (35%), Gaps = 56/178 (31%)
Query: 68 ESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYT 127
+ G + T+G D + +L + TP LP + +V+ +A H +++ AGE +
Sbjct: 152 DGGLVYTFGKRDYQLGYHLPNADVQVTPRLVELPAASPIVQLSASKYHTIALNAAGECFV 211
Query: 128 WGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE 187
WG FG G
Sbjct: 212 WG-------------FGKGGRL-------------------------------------- 220
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+G+EF + P + + KVAAG HTL LS GQV+ WG GQLG
Sbjct: 221 -----GTGNEFDRIEPTRLVSLETTPMKKVAAGENHTLALSRSGQVFSWGSNSFGQLG 273
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 31/135 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
++P LV L I +++A HT+ L+ G+ + WG+G G+LG G+ + L+
Sbjct: 177 VTPRLVELPAASPIVQLSASKYHTIALNAAGECFVWGFGKGGRLGTGNEFDRIEPTRLVS 236
Query: 261 C----LEHAASGKDRPL-LVRQGSV-----NSSGKAGR---------------------S 289
++ A+G++ L L R G V NS G+ G
Sbjct: 237 LETTPMKKVAAGENHTLALSRSGQVFSWGSNSFGQLGHPGKSSSSQSRLTPKRVDAFRFH 296
Query: 290 YVKEIACGGRHSAVV 304
+K+IA G HSA +
Sbjct: 297 EMKDIAASGCHSAAI 311
>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
Length = 1060
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 58/122 (47%), Gaps = 28/122 (22%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---- 266
GV++ VAA G HTL L D G+V+ WG G EGQLG G+ + VP P I L +
Sbjct: 117 GVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGHGA-FEAVPHPRRIARLPTSVVAVG 175
Query: 267 SGKDRPL-LVRQGSVNS-----SGKAGR------------SYVK-----EIACGGRHSAV 303
+G+ L L G+V S G G + K ++CG RH+AV
Sbjct: 176 AGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAV 235
Query: 304 VT 305
VT
Sbjct: 236 VT 237
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEP---FPLPTEASVVKAAAGWAHCVSVT 120
LA + G++ +WG D EGQ L G P P LPT SVV AG H +++
Sbjct: 131 LALDDRGRVYSWGRGD-EGQ--LGHGAFEAVPHPRRIARLPT--SVVAVGAGRTHSLALD 185
Query: 121 EAGEVYTWG 129
G VY+WG
Sbjct: 186 ADGAVYSWG 194
>gi|213409582|ref|XP_002175561.1| RCC1 domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212003608|gb|EEB09268.1| RCC1 domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 537
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 68/201 (33%), Gaps = 70/201 (34%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPF--------PLPTEAS---- 105
GG A+ T + G+++TWG DD LT + E EP P P E
Sbjct: 126 GGMHTAVVTHD-GRVLTWGVNDDFALGRLTKNQVDEDGEPIDNDTLEGTPYPVEGELLNK 184
Query: 106 -VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
VVK V++T+ GE Y WG C S G +T K S PT+
Sbjct: 185 HVVKVVCSDNLTVAITDEGECYAWGTFRC-----------SDGILGFSATQKHSPSPTKI 233
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
P ++ VA G H
Sbjct: 234 DIP---------------------------------------------EVADVAVGTDHV 248
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
L L+ GQV+ WG G + QLG
Sbjct: 249 LALTTAGQVYAWGNGQQCQLG 269
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 31/139 (22%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ P + G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG+ + +P
Sbjct: 113 ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 172
Query: 259 IPCLE-----HAASGKDRPLLV------------RQGSVNSSGKAGRSYVKE-------- 293
+ LE A+G + R G + SG + + + +
Sbjct: 173 VKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALK 232
Query: 294 ------IACGGRHSAVVTD 306
I+CG H++V+T+
Sbjct: 233 TLNVVYISCGYEHTSVLTE 251
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 61/248 (24%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G L SP+ + PI A D+ G ++A G++ TWG A EGQ
Sbjct: 51 GQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGRVFTWG-AGSEGQLG 106
Query: 86 LTSGKHGETPEPFPLPTEAS------VVKAAAGWAHCVSVTEAGEVYTWGWR-------- 131
+ GE+ E +PT+ + +++ + G H ++++E G+V++WG
Sbjct: 107 I-----GESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 161
Query: 132 ---------------ECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
E +P A+V G SF G + R+G+
Sbjct: 162 NNLCSQASPQKVKSLEGIPLAQVAA--GGTHSFALSLMGTSFGW-------GNNRSGQLA 212
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+ +SA+E+ P S L TLN + ++ G HT +L++ GQV+ +
Sbjct: 213 L---SGNSAKEQIYKPHS-------IGALKTLN----VVYISCGYEHTSVLTEDGQVFTF 258
Query: 237 GYGGEGQL 244
G QL
Sbjct: 259 GGSSSEQL 266
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVPT 255
V I V+ G H++ + G+V+ WG G EGQLG+G I +PT
Sbjct: 73 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPT 118
>gi|222642086|gb|EEE70218.1| hypothetical protein OsJ_30332 [Oryza sativa Japonica Group]
Length = 607
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 108/293 (36%), Gaps = 58/293 (19%)
Query: 33 PEKSPILSPIPARLCGGDSWKDV-----CGGGCG-FALATSESGKLITWGSADDEGQSYL 86
P+ +P+LSP P RL + G CG F A G WG D
Sbjct: 66 PDPAPVLSPTPGRLPDAAAAGTAAGGVEVGISCGLFHSAVVVDGGAWVWGKGDGGRLGLG 125
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
P P +E V+ A G H ++T +GEV+TWG+ FG+
Sbjct: 126 DESS-AFVPRHNPNLSELRVL--ALGGIHSAALTASGEVFTWGY----------GGFGAL 172
Query: 147 GSFQKDS-----------TGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPAS 194
G + GK S + T A + +GE R R +
Sbjct: 173 GHYVYHRELLPRKVNGPWEGKISHIATSGAHTAAITDSGELYTWGRDEGDGRLGLGSGGG 232
Query: 195 GDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
E +LS P V P V + VA GG T+ L+ GQ+W WG +LG GS
Sbjct: 233 PGEAGSLSVPSKVNALP-VSVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSN-SSD 290
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LIP L++ +V ++ACGG HS +TD
Sbjct: 291 WRPQLIPSLKNL------------------------HVIQVACGGYHSLALTD 319
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL-- 258
+P +T G+KI +V+ G H+L LS QV+ WG GQLGLG + +P
Sbjct: 117 FTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVR 176
Query: 259 ----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY---------------- 290
IP + AA G L G+ NS+G+ +GR+
Sbjct: 177 SLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNL 236
Query: 291 -VKEIACGGRHSAVVT 305
V I+CG H+AV++
Sbjct: 237 GVIYISCGDEHTAVLS 252
>gi|162450118|ref|YP_001612485.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
gi|161160700|emb|CAN92005.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
Length = 1462
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
TLSP LV + +IT + G H+L L G VW WG G GQLG+G+ K P I
Sbjct: 900 TLSPALVPMLD--RITAIVTGEEHSLALRQDGTVWAWGNNGNGQLGVGT-AKASQVPVKI 956
Query: 260 PCLEHA---ASGKDRPLLVR 276
P L A+G + L VR
Sbjct: 957 PTLNGVTAIAAGANHSLAVR 976
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 24/115 (20%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKD 270
+T +AAG H+L + G VW WG GQLG G+ R + V L L A
Sbjct: 962 VTAIAAGANHSLAVRGDGTVWAWGNNAHGQLGDGTTSQRSEPVQVSELGQVLRVAGGTGH 1021
Query: 271 RPLLVRQGSV-----NSSGK----------------AGRSYVKEIACGGRHSAVV 304
L G+V NS G+ +G S+ +ACGG SAV+
Sbjct: 1022 SLALKADGTVWAFGSNSHGQLGVSTSTSQRSIAAPVSGISHASAVACGGNSSAVL 1076
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 27/108 (25%)
Query: 200 TLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
+ P L+ V I KVA +GG+H L LS G V+ WG G +G+LG G+R+
Sbjct: 4005 VMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY----- 4059
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
DRP LV G V +IACGG HSA +T
Sbjct: 4060 ------------DRPKLVED-------LLGIEIV-DIACGGHHSAAIT 4087
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 53 KDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASV 106
+D+ CG G A+A++ G+L TWG + Y G HG+T P+ + V
Sbjct: 3093 RDIACGSGHSAAIASN--GELYTWGLGE-----YGRLG-HGDTATQMKPKLVQALSGQRV 3144
Query: 107 VKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
V+ A G A +S+T G VYTWG + K+ R GS G + + + L Q
Sbjct: 3145 VQVACGSRDAQTMSLTADGCVYTWGDGDF---GKLGRG-GSDGCYTPLLVDRLNGLGVVQ 3200
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT 224
+ + + + + G++ P LV G KI VA G H
Sbjct: 3201 VECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHC 3260
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRI 250
L ++D GQV+ WG GQ G G+ I
Sbjct: 3261 LAVTDTGQVYAWGDNDHGQQGNGTTI 3286
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 27/112 (24%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
GD++ P L+ I KVA +GG+H L L+ G+V+ WG G +G+LG G+
Sbjct: 3019 GDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN---- 3074
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ D+P L+ S K+ R +++IACG HSA +
Sbjct: 3075 -------------CTTLDKPRLIE------SLKSKR--IRDIACGSGHSAAI 3105
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 77/218 (35%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G PL ++ V+K
Sbjct: 4130 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPLKIDSLAGLGVIKVEC 4184
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G VYTWG G + + G
Sbjct: 4185 GSQFSVALTRSGAVYTWG----------------KGDYHRLGHG---------------- 4212
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + SD G
Sbjct: 4213 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4248
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L+ HA GK
Sbjct: 4249 EVFTWGDNDEGQLGDGT-TSALQRPRLV----HALQGK 4281
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L + SG + +WG D Y G+ G +TP+ + +VV+
Sbjct: 620 CGSGDSQTLCVTASGIVFSWGDGD-----YGKLGRGGSDGSKTPKIVDKLLDINVVRVFC 674
Query: 112 GWAHCVSVTEAGEVYTWG 129
G ++T GEVYTWG
Sbjct: 675 GGQFSAALTARGEVYTWG 692
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 29/133 (21%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
SP V + + +V+AGG H+ LS G V+GWG GQLGLG TP L+
Sbjct: 166 SPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDR-ETPTLVHY 224
Query: 262 LE-----HAASGKDR-PLLVRQGSVNS--SGKAGR--------------------SYVKE 293
L AA GKD +L G+V + SG G+ + V +
Sbjct: 225 LNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTK 284
Query: 294 IACGGRHSAVVTD 306
IACG H+ V+TD
Sbjct: 285 IACGRYHTLVLTD 297
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 29/124 (23%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-------SRIKMVPTPHLIPCLE 263
G+ +T+VA G +HT++LS GQV+ WG GQLGLG S + V + +P ++
Sbjct: 121 GITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQ 180
Query: 264 HAASGKDRPLLVRQGSV-----NSSGKAGR---------SYVKEI--------ACGGRHS 301
+A G L GSV N G+ G + V + ACG H+
Sbjct: 181 VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHT 240
Query: 302 AVVT 305
AV+T
Sbjct: 241 AVLT 244
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 31/201 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAAGWA 114
G + S+ G++ TWG + GQ L GK G +P+ + VV+ +AG
Sbjct: 130 GSQHTVVLSKDGQVYTWGQ-NSRGQ--LGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGD 186
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++ +G V+ WG +C G G D+T +++ PT + K+
Sbjct: 187 HSFALSVSGSVFGWGRNDC----------GQLGL--GDTTDRET--PTLVHYLNMKKTVF 232
Query: 175 EVVKRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHT 224
+ T+ + G + L P LV G K+TK+A G HT
Sbjct: 233 AACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHT 292
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
L+L+D +V+ +G GQLG
Sbjct: 293 LVLTDHMKVYSFGCNEHGQLG 313
>gi|401411681|ref|XP_003885288.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
gi|325119707|emb|CBZ55260.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
Length = 699
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 23/105 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +V+ V+I V G +H L L+D G V+ +G G GQLGLG ++V P +
Sbjct: 129 LQPVVVSSLAYVRIVDVCVGEQHALFLADSGDVYAYGEGVYGQLGLGYERQIVNHPQKV- 187
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
G + V++IACG HS +T
Sbjct: 188 ----------------------EGSLSQLAVQQIACGDYHSVALT 210
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 93/250 (37%), Gaps = 63/250 (25%)
Query: 102 TEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
++ +V + A G H V++T G V+ WG +CV D +G P
Sbjct: 192 SQLAVQQIACGDYHSVALTTEGLVFAWGAADCV----------------GDGSGLCRFSP 235
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPAS--------GDEFFT---LSPCLVTLNP 210
P G V + +AR + + GD FF +P ++ L P
Sbjct: 236 VRIRLPLPLGCGHFPVDACRVIAARFQQTMAVTEAGHLLVWGDTFFANFHATPEVLCLFP 295
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH-----------LI 259
+ + ++A G L L+D GQV+GWG G G+L + + P L
Sbjct: 296 -IPVVQIAIGKHFGLALTDDGQVYGWGDGTYGELTAACPMAPMTLPEPLNLKDSTGQSLP 354
Query: 260 PCLEHAASGKDRPLLVRQGSV-----NSSGKAG-------------------RSYVKEIA 295
P + A + LL + N +G+ G RS +IA
Sbjct: 355 PVVAIATGTRHAILLTHDMRLWALGDNLAGQCGVPGHQTRLSVPKMVKLGELRSRASKIA 414
Query: 296 CGGRHSAVVT 305
CG RHSA +T
Sbjct: 415 CGYRHSACIT 424
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 27/100 (27%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P P +I EH
Sbjct: 229 PGIPEKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETPVPKVI---EHIKD 284
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
K + I CG H+A++TD+
Sbjct: 285 LK---------------------ISSIFCGENHTALITDL 303
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + + HLI
Sbjct: 70 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDER-NSFHLISFFT 127
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G + I+C
Sbjct: 128 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWISC 187
Query: 297 GGRHSAVVT 305
G HSA VT
Sbjct: 188 GYYHSAFVT 196
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 31/210 (14%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVKAAAG 112
G ++A L TWG +D GQ HG+ + +PT S + G
Sbjct: 22 GASHSVALLAGNVLCTWGRGED-GQL-----GHGDAEDRL-VPTVISGFDAPGITSVICG 74
Query: 113 WAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTEQA 165
H + +E +VY+WGW DFG G F + +Q
Sbjct: 75 ADHTTAYSEDEHQVYSWGWG----------DFGRLGHGNSTDVFTPQPVKALQGIKIKQL 124
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
D + S R ++ G +L P + G+ + +AAG HT
Sbjct: 125 ACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTA 184
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
+++ G ++GWG+G G LGLG R + VP
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRFVP 214
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
TP+P + + A G +HC++VT AGEV +WG + T + DS
Sbjct: 109 TPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTE---------DS 159
Query: 154 TGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSP 203
Q+ E AG E T++ E+ + N GD P
Sbjct: 160 LLPQTIQAFEGISVKMIAAGAE-----HTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP 214
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V+ G K+ VA G RHT+ +S G ++ +G+ GQLG G + PH + L+
Sbjct: 215 EKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKVEALK 273
Query: 264 HAASGK 269
+++ +
Sbjct: 274 DSSTSQ 279
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 25/112 (22%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
G+ +P V G+KI ++A G H L ++ G+V WG GQLGLG+ +
Sbjct: 102 GNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSL- 160
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P I E + VK IA G H+A VT+
Sbjct: 161 LPQTIQAFEGIS------------------------VKMIAAGAEHTAAVTE 188
>gi|307176968|gb|EFN66274.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Camponotus floridanus]
Length = 1719
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
G LA S G + +GS + GQ + P LP ++ G+ H +
Sbjct: 977 AGYAHTLALSVDGIVYAFGS-NVLGQLGIGGNAKSSIPTKISLPD--GIILINTGYFHNL 1033
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV- 176
++++ ++Y WG V + + Q+D ++ +E+ P E++
Sbjct: 1034 ALSDTNKLYVWGASPQVLRLQAQAQKRTRILEQQDERKNKTLEESEKMPSGVINLNEDLL 1093
Query: 177 ------VKRRKTSSAREESENPASGDEFFT----------LSPCLV--TLNPGVKITKVA 218
V+ + +S+ E + P+ L P +V +L G +IT+++
Sbjct: 1094 EDSVQTVETERITSSVETRKKPSGSANLRNIELIDESQAHLKPSIVDTSLIRG-QITQIS 1152
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
AG H +++ G ++ WG +GQLG G+R ++ +PTP
Sbjct: 1153 AGCHHNALITKDGSLYTWGRNLDGQLGNGTRKEVPIPTP 1191
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 92/245 (37%), Gaps = 64/245 (26%)
Query: 22 VYMWGY-LPGTSPEKSPILS-PIPARLCGGDSWK-DVCGGGCGF--ALATSESGKLITWG 76
+Y WG + G S +L P +C S + +V CG LA + +G + WG
Sbjct: 833 IYTWGSSVQGCLGTGSSVLRYGAPHAICFFRSMEVEVFSVSCGHCHTLAVTNNG-IYAWG 891
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
S+ GQ L +PE + ++ A AG H V++T G V+TWGW
Sbjct: 892 SSQ-FGQLGLGKVLQCSSPELIISLAQEIIIDAVAGQYHSVALTADGRVFTWGW------ 944
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
G G +T E+ PS
Sbjct: 945 -------GIHGQLGHGNT-------DEKITPS---------------------------- 962
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPT 255
LVT GV + ++AG HTL LS G V+ +G GQLG+G K +PT
Sbjct: 963 --------LVTALLGVVVRCISAGYAHTLALSVDGIVYAFGSNVLGQLGIGGNAKSSIPT 1014
Query: 256 PHLIP 260
+P
Sbjct: 1015 KISLP 1019
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
D+ CG F++A ++ G++ +WG D++ + T +H P+ VV A
Sbjct: 658 DIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTE-EHVRYPKIMNGLQGKKVVDVAV 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE+GEVY+WG
Sbjct: 717 GSTHCLALTESGEVYSWG 734
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 38/236 (16%)
Query: 46 LCGGDSWKDVCGGGCG--FALATSESGKLITWG----------SADDEGQSYLTSGKHGE 93
L G + K V CG ++ A + G+L TWG S++D+ L +G G
Sbjct: 544 LSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKG- 602
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDS 153
+ V +G A +SVTE G+V++WG D+G G D
Sbjct: 603 --------LKVVDVSCGSGDAQTLSVTENGQVWSWG----------DGDYGKLGRGGSDG 644
Query: 154 TGKQSALPTEQAPPSDK-RAGEE----VVKRRKTSS-AREESENPASGDEFFTLSPCLVT 207
+ Q K R G + + K + S + +++ G E P ++
Sbjct: 645 CKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMN 704
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ VA G H L L++ G+V+ WG + Q RI P P ++P L+
Sbjct: 705 GLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTLRIAK-PVPSVLPGLD 759
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4218 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4276
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4277 CTEDGEVYTWG 4287
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 25/97 (25%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASG 268
N VK V +GGRH L+ G+V+ WG G +G+LG SR+
Sbjct: 3048 NYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC---------------- 3091
Query: 269 KDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
D+P L+ + K R +++IACG HSA +T
Sbjct: 3092 -DKPRLIE------ALKTKR--IRDIACGSSHSAAIT 3119
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 27/106 (25%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4040 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4090
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
PC DRP ++ + V +IA GG HSA +T
Sbjct: 4091 PC--------DRPRVIE--------SLRGTEVVDIAAGGAHSACIT 4120
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL P LV I K+AA G+H L LS +++ WG G G+LG G + + P
Sbjct: 481 TLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVSL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
L+ L SGK V IACG +SA +T
Sbjct: 540 LVSAL--------------------SGKQTGKQVIHIACGSTYSAAIT 567
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEAS-----VVKA 109
GG A + GK+ G A T+G+ G + P+P + + VVK
Sbjct: 3002 AGGSKSLFAVTAEGKVYACGEA--------TNGRLGLGISSGTVPIPRQITALSNYVVKK 3053
Query: 110 AA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
A G H ++T G+V++WG D G G F + + K + +
Sbjct: 3054 VAVHSGGRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 167 PSDKRAGEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
A TSS E GD L P +V + G ++ +VA G
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163
Query: 221 GR--HTLILSDMGQVWGWGYGGEGQLGLG 247
R TL L+D G V+ WG G G+LG G
Sbjct: 3164 SRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4065 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHS 4116
Query: 117 VSVTEAGEVYTWG 129
+T AGE+YTWG
Sbjct: 4117 ACITAAGELYTWG 4129
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ ++ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3038 PIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3096
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRE 132
+ A G +H ++T +GE+YTWG E
Sbjct: 3097 IEALKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 203 PCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P LVT G+K+ V+ +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 PMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLIE 652
Query: 261 CLEHAASGKDR 271
L+ K R
Sbjct: 653 KLQDLDIVKVR 663
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 60/160 (37%), Gaps = 40/160 (25%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP 166
V +G HC++++ GEVY+WG E G + P ++
Sbjct: 4055 VAVNSGGKHCLALSSEGEVYSWGEAE------------------DGKLGHGNRSPCDRPR 4096
Query: 167 PSDKRAGEEVVKRRKTSSAREESENPASGDEFFT-----------------LSPCLVTLN 209
+ G EVV ++ S + E +T L P LV
Sbjct: 4097 VIESLRGTEVVD---IAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEAL 4153
Query: 210 PGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
G ++ +A +G TL L+D VW WG G G+LG G
Sbjct: 4154 QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4193
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 25/96 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G+V+ WG G +G+LG G++ +PC DR
Sbjct: 3701 VKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNK---------LPC--------DR 3743
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
P ++ + GK V ++ACGG HSA +T +
Sbjct: 3744 PRIIE----SLRGKD----VVDVACGGAHSAAITAL 3771
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 63 ALATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
ALA + G++ +WG DD G +TS +TP V AAG H +VT
Sbjct: 2797 ALALTADGRVFSWGEGDDGKLGHGDVTSL---DTPRCIEALNGFRVRDVAAGSNHSAAVT 2853
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
+GE+YTWG E +G G D+ + + E G+ VV
Sbjct: 2854 SSGELYTWGLGE----------YGRLG--HGDNLTQLTPKRVESL------VGQRVVQVS 2895
Query: 178 ---KRRKTSSAREESENPASGD-EFFTL---------SPCLVTLNPGVKITKVAAGGRHT 224
+ +T + E + GD +F L SPCLV G+ + V G + +
Sbjct: 2896 CGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFS 2955
Query: 225 LILSDMGQVWGWGYGGEGQLGLGS 248
+ L+ G V+ WG G +LG GS
Sbjct: 2956 VALTCNGHVYTWGKGDYFRLGHGS 2979
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVK 108
VC CG F++A + +G + TWG D Y G + +P E V+
Sbjct: 2945 VCHVECGAQFSVALTCNGHVYTWGKGD-----YFRLGHGSDQHVRWPTLVEGLRGKKVIG 2999
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
+ G HC++VT+AG+V+ WG
Sbjct: 3000 VSVGALHCLAVTDAGQVFAWG 3020
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
V+ V +GGRH L L+ G+V+ WG G +G+LG G + + TP C+E A +G
Sbjct: 2785 VRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGD-VTSLDTPR---CIE-ALNG--- 2836
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
V+++A G HSA VT
Sbjct: 2837 -----------------FRVRDVAAGSNHSAAVT 2853
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
G K+ ++ G H ++ +D G+V+ WG EGQLG G+ + P L+ L++
Sbjct: 3912 GKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTG-IQKPRLVAALQN 3964
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
P LV G K+ V+ G H L ++D GQV+ WG GQ G GS
Sbjct: 2986 PTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGS 3031
>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
Length = 256
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA------- 111
G ++A L +WG +D GQ HG+ + +PT S AAA
Sbjct: 30 GASHSVALLAGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAAAPGITSVI 82
Query: 112 -GWAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTE 163
G H + +E +VY+WGW DFG G F + +
Sbjct: 83 CGADHTTAYSEDEQQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGIKIK 132
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q D + S R ++ G +L P + GV + +AAG H
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEH 192
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSR-IKMVP 254
T +++ G ++GWG+G G LGLG R ++VP
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP 224
>gi|156403119|ref|XP_001639937.1| predicted protein [Nematostella vectensis]
gi|156227068|gb|EDO47874.1| predicted protein [Nematostella vectensis]
Length = 487
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 88/229 (38%), Gaps = 46/229 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL----PTEASVVKAAAGWA 114
G G L +++G + +G D + G T P PL PT+ V K G
Sbjct: 173 GRGHTLILTDAGLVFGFG---DNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAE 229
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
+ + E G+++++G E +G G +T Q + S+K +
Sbjct: 230 FSMLLDENGDIFSFGSPE----------YGQLGH----NTDGQYIVS------SNKMGFQ 269
Query: 175 -EVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
EV+ RR + V GVKI V G HT+ L + G+V
Sbjct: 270 CEVLPRRLVVFVERNKDG-------------FVNHIEGVKIKDVVCGNNHTMALDEQGRV 316
Query: 234 WGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
+ WG+GG G+LG P +P L + K P ++ GS S
Sbjct: 317 FTWGFGGYGRLG-----HQQPKDEHVPRLLTFFNTKGNPSVIFAGSTYS 360
>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 992
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 27/95 (28%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGK 269
G+ + +++AGG H+ +LS G V+GWG GQLGLG + VPT
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPT-------------- 215
Query: 270 DRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
VNS R + I+CGG H+A +
Sbjct: 216 ---------VVNS---LKRKKIVSISCGGEHTAAL 238
Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 20/177 (11%)
Query: 80 DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKV 139
D+G L K E P V++ A G H +++T G+++ WG
Sbjct: 95 DDGGKVLIMDKSTEC-SPLKGLENRQVIQIACGDQHSMALTNDGQLFVWG---------- 143
Query: 140 TRDFGSAGSFQKDSTGKQS--------ALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
G G +K+ G QS +P Q + + +
Sbjct: 144 ENALGQLG-LRKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQ 202
Query: 192 PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
GD P +V KI ++ GG HT L+ G V+ +G GG GQLG S
Sbjct: 203 LGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNS 259
>gi|403369334|gb|EJY84511.1| hypothetical protein OXYTRI_17643 [Oxytricha trifallax]
Length = 1141
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 203 PCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
PCLV G++ I +VA G +HT+ L+ G+++ WG G G LGLG +M P +I
Sbjct: 94 PCLVE---GIQDIVQVACGSQHTMALNRKGEIYAWGGGFYGALGLGD-ARMCDKPQIIQA 149
Query: 262 LEH------AASGKDRPLLVRQGSVNSSG--KAGRSYVKEIACGGRHSAVVTDMS 308
L+H AA + L V G KAG+ + + G +H +++ S
Sbjct: 150 LQHERIVDIAAGNRHSLFLAENQRVYGCGESKAGQLGLGQ---GNQHDRILSPQS 201
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 22/111 (19%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD P ++ +I +AAG RH+L L++ +V+G G GQLGLG
Sbjct: 136 GDARMCDKPQIIQALQHERIVDIAAGNRHSLFLAENQRVYGCGESKAGQLGLGQ------ 189
Query: 255 TPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ DR +L Q SG+ VK++ CG HS +T
Sbjct: 190 -----------GNQHDR-ILSPQSITALSGQG----VKKVCCGKFHSLFLT 224
>gi|340725486|ref|XP_003401100.1| PREDICTED: RCC1 domain-containing protein 1-like isoform 1 [Bombus
terrestris]
gi|340725488|ref|XP_003401101.1| PREDICTED: RCC1 domain-containing protein 1-like isoform 2 [Bombus
terrestris]
Length = 347
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIP 260
+P +V G+++T+++A G HT +++D G ++ WG+ G+LGL + K+V TP LI
Sbjct: 205 NPRIVDALAGIRVTQISAAGWHTAVVTDQGDLYMWGWNTNGELGLTKQESKVVATPTLI- 263
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ +D + V VK++ CG + +TD
Sbjct: 264 ---DFTNDQDENIEVS--------------VKKVQCGNTFTICMTD 292
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 25/104 (24%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L+ + V+ +A G HT++L++ G V+ G G GQLG + ++ P ++ L
Sbjct: 154 PILIDIPKRVRFIDIAGGFDHTILLAENGDVYSMGMGTRGQLG-HNDLEDCDNPRIVDAL 212
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
AG V +I+ G H+AVVTD
Sbjct: 213 -----------------------AGIR-VTQISAAGWHTAVVTD 232
>gi|356507929|ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 559
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 106/296 (35%), Gaps = 61/296 (20%)
Query: 40 SPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
S P ++C V GG +LA G L WG+ + + + TP P
Sbjct: 153 SKTPLKICA------VKAGGM-MSLAIDNHGTLWMWGNCPRQSKEGGLALVSSFTPTPVW 205
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVY--------TWGW----------RECVPSAKVTR 141
+VVK A G H V++ AGE Y +WG+ RE +V R
Sbjct: 206 DFQGHTVVKVACGNEHVVALVSAGETYNGEDLVCYSWGYNSRGQLGLGDRESRLHPEVVR 265
Query: 142 DFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL 201
F ++ +AL T + PSD V+ + ++ G TL
Sbjct: 266 TFDEESPYEVACGAFHTALLTRKKKPSD------TVESTCWTFGLGDNGQLGHGTTQSTL 319
Query: 202 SPCLVTLNP-GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL-------GSRIKMV 253
P V P V + V G HT ++S G VW WG E LGL G+
Sbjct: 320 FPTPVKELPQNVSLICVDCGLFHTSVVSSDGDVWSWGM--EKGLGLCPDASRAGTDSGDA 377
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSY 309
+P L+ C H D P+ ++ACG H+ +V Y
Sbjct: 378 LSPRLMSCQPHQLKFPD-PV-------------------KVACGAAHTVIVARKGY 413
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 48/141 (34%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
VV AAG AH + +T G VY WG G F + TG + ++
Sbjct: 18 VVDVAAGEAHTLLLTGDGSVYCWG----------------KGMFGRLGTGAEK----DEL 57
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
P G NP + F KI +AAG H+L
Sbjct: 58 LPVQLNFG---------------YPNPNGTEGTF-------------KIVGIAAGAYHSL 89
Query: 226 ILSDMGQVWGWGYGGEGQLGL 246
L++ G VW WGY GQLG+
Sbjct: 90 ALAEDGAVWCWGYNFYGQLGI 110
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 92/254 (36%), Gaps = 69/254 (27%)
Query: 97 PFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P P TE + +V AAG H +++ E G V+ WG+ +G G ++S
Sbjct: 67 PNPNGTEGTFKIVGIAAGAYHSLALAEDGAVWCWGYNF----------YGQLGINGEESH 116
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
+ A+ P E+ +SS E+E+ +KI
Sbjct: 117 DNEYAVGDNSLVPRILNKFLELHPPDSSSSGVSEAESKTP-----------------LKI 159
Query: 215 TKVAAGGRHTLILSDMGQVWGWG----YGGEGQLGLGSRIKMVPTP-------------- 256
V AGG +L + + G +W WG EG L L S PTP
Sbjct: 160 CAVKAGGMMSLAIDNHGTLWMWGNCPRQSKEGGLALVS--SFTPTPVWDFQGHTVVKVAC 217
Query: 257 ---HLIPCLEHAASGKDRPLLVRQGSVNSSGKAG-------------RSYVK----EIAC 296
H++ + + L+ NS G+ G R++ + E+AC
Sbjct: 218 GNEHVVALVSAGETYNGEDLVCYSWGYNSRGQLGLGDRESRLHPEVVRTFDEESPYEVAC 277
Query: 297 GGRHSAVVTDMSYP 310
G H+A++T P
Sbjct: 278 GAFHTALLTRKKKP 291
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 17/94 (18%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ VAAG HTL+L+ G V+ WG G G+LG G A + P
Sbjct: 17 KVVDVAAGEAHTLLLTGDGSVYCWGKGMFGRLGTG-----------------AEKDELLP 59
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ + G N +G G + IA G HS + +
Sbjct: 60 VQLNFGYPNPNGTEGTFKIVGIAAGAYHSLALAE 93
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 96/262 (36%), Gaps = 57/262 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA------- 111
G ++A L +WG +D GQ HG+ + +PT S AAA
Sbjct: 30 GASHSVALLAGNVLCSWGRGED-GQL-----GHGDAEDRL-VPTVLSGFDAAAPGITSVI 82
Query: 112 -GWAHCVSVTE-AGEVYTWGWRECVPSAKVTRDFGSAGS------FQKDSTGKQSALPTE 163
G H + +E +VY+WGW DFG G F + +
Sbjct: 83 CGADHTTAYSEDEQQVYSWGWG----------DFGRLGHGNSSDVFTPQPVKALQGIKIK 132
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
Q D + S R ++ G +L P + GV + +AAG H
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEH 192
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
T +++ G ++GWG+G G LGLG R L+P + G+ L
Sbjct: 193 TAAVTEDGDLYGWGWGRYGNLGLGDR-----NDRLVPEKVSSVEGEKMVL---------- 237
Query: 284 GKAGRSYVKEIACGGRHSAVVT 305
IACG RH+ V+
Sbjct: 238 ----------IACGWRHTITVS 249
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 69/193 (35%), Gaps = 59/193 (30%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
CG+ + S SG L T+G + GQ + P ++S+ + + GW H +
Sbjct: 240 CGWRHTITVSSSGSLYTYGWSK-YGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTM 298
Query: 118 SVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV 177
++T G++Y WGW + FG G D P + P D+
Sbjct: 299 ALTSDGKLYGWGWNK----------FGQVGVGDTD----DHCFPVQVKFPEDQ------- 337
Query: 178 KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
K+ +VA G RHTL ++ V+ WG
Sbjct: 338 -----------------------------------KVAQVACGWRHTLAFTEKKNVFSWG 362
Query: 238 YGGEGQLGLGSRI 250
G GQLG G +
Sbjct: 363 RGTSGQLGHGEIV 375
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 88/219 (40%), Gaps = 37/219 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE--TPEPFPLPTEASVVKAAAG 112
+CG A + E ++ +WG D L G + TP+P + + A G
Sbjct: 82 ICGADHTTAYSEDEQ-QVYSWGWGD---FGRLGHGNSSDVFTPQPVKALQGIKIKQIACG 137
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKR 171
+HC++VT AGEV +WG + G G +DS Q E
Sbjct: 138 DSHCLAVTMAGEVQSWGRNQN----------GQLGLGTTEDSLLPQKIQSFEGVCVKMIA 187
Query: 172 AGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
AG E T++ E+ + N GD L P V+ G K+ +A G
Sbjct: 188 AGAE-----HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGW 242
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
RHT+ +S G ++ +G+ GQLG G HL+P
Sbjct: 243 RHTITVSSSGSLYTYGWSKYGQLGHGDF-----EDHLVP 276
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + P P + V + A GW H +
Sbjct: 292 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTL 350
Query: 118 SVTEAGEVYTWG 129
+ TE V++WG
Sbjct: 351 AFTEKKNVFSWG 362
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 38/225 (16%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAH 115
CG +A + G + TWG + GQ L G+ GE E P E V+K AAG H
Sbjct: 116 CGEYHTIALKKDGTVWTWG-YNSYGQ--LGLGEAGEI-ERIPKKIEGLEDVIKVAAGSRH 171
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS---DKRA 172
+++ + G V+ WG+ +G G D + + P + + D A
Sbjct: 172 SLALKKDGTVWAWGYNY----------YGQLG----DESNIRRNTPVQVKGLTGVKDIDA 217
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV--------KITKVAAGGRHT 224
G+ + + R++ G + C +N V IT+++AG H
Sbjct: 218 GDFF-----SVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISAGDEHV 272
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
L L VWGWG G +GQLG G+ + P + S K
Sbjct: 273 LALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTEVKSVK 317
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 23/236 (9%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG + G + + S IP+ + G + + G A+ S+ G L TWG +
Sbjct: 381 VWTWGKNINGILGLGTALDSQIPSVVSGTGDVEVISCGKTHMAIIKSD-GTLWTWG-YNI 438
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
GQ L +G EP + +++ K + G H +++ E ++ WG + + ++
Sbjct: 439 YGQ--LGNGNVDYITEPVTINGISNISKISCGGKHVLAIDENKTLWAWGNNDYL---QLI 493
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE-------NPA 193
D G +S +P A S+K + V +T E+ E N
Sbjct: 494 DDVG----LSAESGSNDYCIPF--AVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAKNTV 547
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+GDE P + GV T V+ G H L L D G V+ G GQLG GS+
Sbjct: 548 AGDEQSVYLPYKIEGLEGV--TDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQ 601
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 35/168 (20%)
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
FP + V+ A G H +++ + G V+TWG+ G AG ++
Sbjct: 103 FPKKSMEGFVQVACGEYHTIALKKDGTVWTWGYNSYGQLG-----LGEAGEIER------ 151
Query: 158 SALPTEQAPPSDKRAGEEVVK----RRKTSSAREESENPASGDEFF----------TLSP 203
P E+V+K R + + +++ A G ++ +P
Sbjct: 152 --------IPKKIEGLEDVIKVAAGSRHSLALKKDGTVWAWGYNYYGQLGDESNIRRNTP 203
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
V GVK + AG ++ L D G VWGWGY +GQ+G G+ I
Sbjct: 204 VQVKGLTGVK--DIDAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGIN 249
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----AASGK 269
+VA G HT+ L G VW WGY GQLGLG ++ P I LE AA +
Sbjct: 111 FVQVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEGLEDVIKVAAGSR 170
Query: 270 DRPLLVRQGSV 280
L + G+V
Sbjct: 171 HSLALKKDGTV 181
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 103/284 (36%), Gaps = 40/284 (14%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WGY G + I S +P + G + + G LA + + WG+ D
Sbjct: 231 VWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISAGD-EHVLALDKDKNVWGWGAGDK 289
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
T+ PE TE VKA G ++ E G ++ WG +
Sbjct: 290 GQLGNGTAASFLRIPEKLSSFTEVKSVKA--GTMVSAAIKEDGTLWIWG-DNTYGIMGNS 346
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
R+ S+ +KD +G ++ + + K G + + G +
Sbjct: 347 RNINSSPVQRKDISGIKAVELNQYCAAALKNDGTVWTWGKNINGIL------GLGTALDS 400
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P +V+ V++ ++ G H I+ G +W WGY GQLG G+ + + P I
Sbjct: 401 QIPSVVSGTGDVEV--ISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGN-VDYITEPVTIN 457
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
G S + +I+CGG+H +
Sbjct: 458 --------------------------GISNISKISCGGKHVLAI 475
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 193 ASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK 251
A G++ F+L P G++ I ++AG + L L + G VW WG GQLG GS K
Sbjct: 653 AHGNDTFSLEPMQA---EGLENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYK 709
Query: 252 MVPTPHLIPCLEHAA---SGKDRPL-LVRQGSVNSSGK 285
P + LE+ +G+D + + G V + GK
Sbjct: 710 -TNVPVQVDGLENIVKIIAGRDSSFAITKDGDVWAWGK 746
>gi|350415154|ref|XP_003490550.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus
impatiens]
Length = 347
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 19/106 (17%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIP 260
+P +V G+K+T+++A G HT +++D G ++ WG+ G+LGL + K+V TP L+
Sbjct: 205 NPRIVDALAGIKVTQISAAGWHTAVVTDQGDLYMWGWNTHGELGLTKQESKVVATPTLVD 264
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ +D + V VK++ CG + +TD
Sbjct: 265 ----FTNDQDENIEVS--------------VKKVQCGNTFTICMTD 292
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3165 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3219
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3220 HCLAVTDAGQVYAWG 3234
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4323 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4381
Query: 119 VTEAGEVYTWG 129
++AGEVYTWG
Sbjct: 4382 CSDAGEVYTWG 4392
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4258 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4312
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4313 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHGS----- 4351
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4352 ------------VDHVRRPKKVAALQ-----------------------GKKIISIATGS 4376
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4377 LHCVACSDAGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4417
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4157 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSY-----------------DR 4199
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ + S V +IACG HSA +T
Sbjct: 4200 PKLLEHLNGMS--------VADIACGSAHSAAIT 4225
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 27/95 (28%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 2999 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3041
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVT 305
P LV +A R+ +++IACG HSA ++
Sbjct: 3042 PRLV---------EALRAKKIRDIACGSSHSAAIS 3067
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA + G+L +WG A G + G P +V A G HC
Sbjct: 803 AGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHC 862
Query: 117 VSVTEAGEVYTWG 129
++++ AGE++ WG
Sbjct: 863 LALSSAGEIFGWG 875
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 80/207 (38%), Gaps = 33/207 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 2951 AGGSKSLFVVSQDGKVFACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3007
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 3008 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3053
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LVT G ++ +VA G R
Sbjct: 3054 RDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSR 3113
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLG 247
TL L++ G V+ WG G G+LG G
Sbjct: 3114 DAQTLALTEDGAVFSWGDGDFGKLGRG 3140
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
LCG + CG LA +E G + +WG D G+ + TP +
Sbjct: 3100 LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGD-FGKLGRGGSEGSATPHEIERLSGIG 3158
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV+ G +++T AGEV+TWG
Sbjct: 3159 VVQIECGAQFSLALTRAGEVWTWG 3182
>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
Length = 1386
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 23/95 (24%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
++I +V+ G +H++ LS G+++ WGYG +GQLG G +L+P
Sbjct: 1018 IQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLGHGD-----TNDYLLP---------KE 1063
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
R+ S+N V IACG HS +TD
Sbjct: 1064 IDFFRKNSIN---------VGMIACGHSHSGCITD 1089
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 60 CGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPE-PFPLPTEA----SVVKAAAG 112
CG+ + A + G +++WG + HG+T P P EA +++ + G
Sbjct: 973 CGYHHSAAVTSDGMILSWG------RGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCG 1026
Query: 113 WAHCVSVTEAGEVYTWGWRE 132
W H ++++ G +++WG+ E
Sbjct: 1027 WQHSMALSSQGRIFSWGYGE 1046
Score = 40.8 bits (94), Expect = 0.72, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
L +L+ K+ +++AG RH ++D G+++ WG+ QLGLG K P
Sbjct: 1304 LQSLSQSEKVVQISAGCRHAACVTDSGKLYAWGFNFYEQLGLGDSEKDFDVP 1355
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA ++SG++ TWG D + T +H P P V+ A G HC++
Sbjct: 3494 GAQFSLALTKSGEVWTWGKGDYYRLGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLA 3552
Query: 119 VTEAGEVYTWG 129
VT++G+VY WG
Sbjct: 3553 VTDSGQVYAWG 3563
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 117/318 (36%), Gaps = 77/318 (24%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P++ PILS + K G A+A + GK+ +WG +D GK
Sbjct: 3316 TPKQVPILSQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3360
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G E P+ + A G +H ++T +GE+YTWG E +G
Sbjct: 3361 GHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGE----------YG 3410
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--KTSSAREESENPASGD-EFFTL 201
G + K P +D R + R +T EE + GD +F L
Sbjct: 3411 RLGHGDNCTQLK----PKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKL 3466
Query: 202 S---------PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
P V GV + ++ G + +L L+ G+VW WG G +LG G+ +
Sbjct: 3467 GRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTD-QH 3525
Query: 253 VPTPHLIPCLE-----HAASGKDRPLLV---------------RQGSVNSSGKAGRS--- 289
V P I L H A G L V +QGS N+ S
Sbjct: 3526 VRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVL 3585
Query: 290 -----YVKEIACGGRHSA 302
+V +ACG HS
Sbjct: 3586 GLDGIFVNRVACGSSHSV 3603
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 27/112 (24%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P LV V I KVA +GG+H L LS G+V+ WG G +G+LG G+R
Sbjct: 4452 TPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4501
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMSYPI 311
DRP L+ +++ G V +IACG HSA +T + +
Sbjct: 4502 -------DSYDRPKLIE--ALSGIG------VIDIACGSAHSACITSQGHVL 4538
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H + L+ G+V+ WG G +G+LG G+R+ + P LI L
Sbjct: 3328 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIETLR-------- 3378
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+++IACG HSA +T
Sbjct: 3379 ----------------TKRIRDIACGSSHSAAIT 3396
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 78/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P+ E+
Sbjct: 4565 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESL 4619
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V K G V++T +G VYTWG G + + G
Sbjct: 4620 AGLGVTKVECGSQFSVALTRSGSVYTWG----------------KGDYHRLGHGN----- 4658
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4659 ------------TDHVRRPKKVAALQ-----------------------GKKIISIATGS 4683
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4684 LHCVACSDGGEVFTWGDNDEGQLGDGT-VSAIQRPRLVQSLQ 4724
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 83/225 (36%), Gaps = 45/225 (20%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGE-TPEPF 98
IP R+ + + V G CG ++ A + +G+L TWG T G+ G E
Sbjct: 672 IPTRIVAL-AERQVTGVFCGSSYSAAITAAGELYTWGRG--------TYGRLGHGNSEDK 722
Query: 99 PLPTEASVVK--------AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQ 150
LPT V+K G AH + VT+ G VY WG DFG G
Sbjct: 723 HLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWG----------DGDFGKLG--- 769
Query: 151 KDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA-----------REESENPASGDEFF 199
+ T S++P P +V S A + G
Sbjct: 770 -NGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEH 828
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
T SP + G I +A G H L L+ G+++GWG QL
Sbjct: 829 TASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQL 873
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A G + +WG + S +H +P+ ++V A G AHC++
Sbjct: 797 GSHFSVALGRDGTVYSWGKGHGGRLGHGHS-EHTASPKAIQALEGKNIVDLAVGLAHCLA 855
Query: 119 VTEAGEVYTWGWRE----CVPSAKVTRD 142
+T +GE+Y WG + C P VTRD
Sbjct: 856 LTASGELYGWGRNDFQQLCPPC--VTRD 881
>gi|159039899|ref|YP_001539152.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918734|gb|ABW00162.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 554
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 18/201 (8%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
+T+ S ++ WG +D G+ S TP LP+ +V A G H +++T AG
Sbjct: 51 STAASDTILAWGQ-NDYGELGNGSTAGSNTPVVVSLPSATTVTAVAGGGDHSLALTSAGT 109
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
V WG D G G + ++ AG + TS+
Sbjct: 110 VLAWG----------RNDHGQLGDGSTVDKVEPVSVDFPAGTTVTAIAGGDDHNLALTSA 159
Query: 185 A------REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
R G L P V G +T +A G H L ++ G V+ WG
Sbjct: 160 GTVLAWGRNHRGQLGDGSTVDKLEPVSVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGS 219
Query: 239 GGEGQLGLGSRIKMVPTPHLI 259
G+LG G+ I TP L+
Sbjct: 220 NSSGELGDGTTIDRT-TPILV 239
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 15/198 (7%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL--PTEASVVKAAAGWAH 115
GG LA + +G ++ WG + GQ L G + EP + P +V A G H
Sbjct: 148 GGDDHNLALTSAGTVLAWGR-NHRGQ--LGDGSTVDKLEPVSVDFPAGTTVTAIAGGDDH 204
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++T G V+TWG + + + G + + +T LP +
Sbjct: 205 NLAITSTGGVFTWG-------SNSSGELGDGTTIDR-TTPILVGLPGTTVTTTAGGGHSF 256
Query: 176 VVKRRKTSSAREESEN--PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQV 233
V T A ++ + +G+ L P +V++ G +T +A G H+L L+ G +
Sbjct: 257 AVTSADTVHAWGDNSDGQLGNGNNVDQLEPVVVSMPLGATVTAIAGGNDHSLALTAAGAL 316
Query: 234 WGWGYGGEGQLGLGSRIK 251
WG GQLG G+ +
Sbjct: 317 LAWGNNDVGQLGNGNTLD 334
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R + G + P V G +T +A G H L L+ G V WG GQLG
Sbjct: 115 RNDHGQLGDGSTVDKVEPVSVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQLG 174
Query: 246 LGSRI-KMVPTPHLIPC---LEHAASGKDRPL-LVRQGSV-----NSSGKAG 287
GS + K+ P P + A G D L + G V NSSG+ G
Sbjct: 175 DGSTVDKLEPVSVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGELG 226
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F+LA ++SG++ TWG D + T +H P P V+ A G HC++
Sbjct: 3145 GAQFSLALTKSGEVWTWGKGDYYRLGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLA 3203
Query: 119 VTEAGEVYTWG 129
VT++G+VY WG
Sbjct: 3204 VTDSGQVYAWG 3214
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 27/106 (25%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P LV V I KVA +GG+H L LS G+V+ WG G +G+LG G+R
Sbjct: 4012 APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNR---------- 4061
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
DRP L+ +++ G V +IACG HSA +T
Sbjct: 4062 -------DSYDRPKLIE--ALSGIG------VIDIACGSAHSACIT 4092
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P+ E+
Sbjct: 4125 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKIPMKIESL 4179
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T +G VYTWG G + + G
Sbjct: 4180 AGLGVIKVECGSQFSVALTRSGSVYTWG----------------KGDYHRLGHGNT---- 4219
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4220 -------------DHVRRPKKVAALQ-----------------------GKKIISIATGS 4243
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4244 LHCVACSDSGEVFTWGDNDEGQLGDGT-VTAIQRPRLVQSLQ 4284
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 40 SPIPARLCGGDSWKDV--CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
SPIP ++ D+ +V G F++A S G L TWG G+ + +H P+
Sbjct: 714 SPIPVQI---DTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHG-GRLGHGNSEHSNVPKL 769
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WRECVPSAKVTRD 142
+ A G AHC+++T +GE+Y WG +++ PS V+RD
Sbjct: 770 VRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSG-VSRD 816
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H + L+ G+V+ WG G +G+LG G+R+ + P LI L
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTL-EKPKLIESLR-------- 3029
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
V++IACG HSA +T
Sbjct: 3030 ----------------TKRVRDIACGSSHSAAIT 3047
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 80/201 (39%), Gaps = 21/201 (10%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWA 114
GG S+ GKL G + G+ L + TP P+ + V K A +G
Sbjct: 2931 AGGSKSLFIVSQDGKLYACGEGTN-GRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGK 2989
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGE 174
H +++T G+V++WG E G G + + K + + + A
Sbjct: 2990 HAMALTLDGKVFSWGEGED----------GKLGHGNRLTLEKPKLIESLRTKRVRDIACG 3039
Query: 175 EVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLI 226
TSS E GD L P LVT G ++ +VA G R TL
Sbjct: 3040 SSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLC 3099
Query: 227 LSDMGQVWGWGYGGEGQLGLG 247
L++ G V+ WG G G+LG G
Sbjct: 3100 LTEEGLVFSWGDGDFGKLGRG 3120
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 61/221 (27%)
Query: 53 KDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK--HGETPEPFPLPTEASVVK 108
K VCG CG ++ A + +G+L TWG T G+ HG + + +PT+ +K
Sbjct: 620 KQVCGIYCGASYSAAITIAGELFTWGRG--------TYGRLGHGNSDDKL-VPTQVQALK 670
Query: 109 A--------AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
+ +G AH + VT+ G ++ WG DFG G + + S +
Sbjct: 671 SYKVVDVALGSGDAHSMCVTDNGLLFAWG----------DGDFGKLG----NGSCNGSPI 716
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SP 203
P + + +V + S + S + +T P
Sbjct: 717 PVQI---------DTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVP 767
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQL 244
LV G KI VA G H L L+ G+++GWG Q+
Sbjct: 768 KLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 95/249 (38%), Gaps = 57/249 (22%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
+P + PIL+ + K G A+A + GK+ +WG +D GK
Sbjct: 2967 TPRQVPILNQYVVK-------KVAVHSGGKHAMALTLDGKVFSWGEGED--------GKL 3011
Query: 92 G-------ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
G E P+ V A G +H ++T +GE+YTWG E +G
Sbjct: 3012 GHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGE----------YG 3061
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV------KRRKTSSAREESENPASGD-E 197
G + K + T Q G VV + +T EE + GD +
Sbjct: 3062 RLGHGDNCTQLKPKLVTTLQ--------GHRVVQVACGSRDAQTLCLTEEGLVFSWGDGD 3113
Query: 198 FFTL---------SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
F L P V V + ++ G + +L L+ G+VW WG G +LG G+
Sbjct: 3114 FGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGT 3173
Query: 249 RIKM-VPTP 256
+ PTP
Sbjct: 3174 DQHVRKPTP 3182
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 18/151 (11%)
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A ++ V+ +++ +++T GW C P +G +T ++P A +
Sbjct: 464 AGNYSTKVNKSKSQKIFTLGWSSCSPEM-----YGFMSEATNGTTQLMGSIPRYSAATIE 518
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL--------SPCLVTLNPGVKITKVAAG- 220
+ +V R+ + +G + F+L +P GV + ++AA
Sbjct: 519 LPSTLQV---RQVACTENNIYILTTGGQVFSLHSNSSENIAPKAFEGLEGVHVVQIAAHC 575
Query: 221 -GRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
G+H ++LS +VW WG G G+LG G +
Sbjct: 576 EGKHVMVLSSANEVWSWGAGDGGRLGHGDTV 606
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 25/92 (27%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G K+ VA G H L ++D GQV+ WG GQ G G+ + + P+L+ L+
Sbjct: 3188 GKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTV-VNKKPNLVLGLDGV----- 3241
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSA 302
+V +ACG HS
Sbjct: 3242 -------------------FVNRVACGSSHSV 3254
>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
Length = 2141
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 187 EESEN-PASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+E EN +E P +V + + I KV+ G TL LS G V+ WG G G LG
Sbjct: 226 KEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLG 285
Query: 246 LGSR-IKMVP-------TPHLIPCLEHAASGKDRPL-LVRQGSVNS--SGKAGR 288
G + + M P HL ++ A G + L L QG V S +G+ GR
Sbjct: 286 QGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGR 339
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH-----AA 266
+KI V+ G H L ++ G +GWG GQLG+G + +V P I L+ A
Sbjct: 675 MKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTA 734
Query: 267 SGKDRPLLVRQ-GSVNSSG 284
SG+ L + G V SG
Sbjct: 735 SGESHSLFLSDLGEVLCSG 753
Score = 37.4 bits (85), Expect = 9.0, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT--EASVVKAAAGWAHC 116
G +L +GK + WGS+ D G+ L + +P L T + + + AAG H
Sbjct: 420 GSNHSLCILRNGKAMCWGSSKD-GKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHS 478
Query: 117 VSVTEAGEVYTWG 129
+++TE GE+Y++G
Sbjct: 479 IALTENGEIYSFG 491
>gi|340939343|gb|EGS19965.1| putative regulator of chromosome condensation protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 623
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 22 VYMWGYL--------PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI 73
VY WG G E S ++ P G D+ GG +LA +E GKL+
Sbjct: 443 VYGWGLNNYAELGIEDGVGQEGSYLMRPQLIEALAGYKIVDIAGGEH-HSLACTEDGKLL 501
Query: 74 TWGSADDE--GQSYLTSGKHG----ETPEP----FP--LPTEASVVKAAAGWAHCVSVTE 121
TWG D GQ + + E +P FP +P VVK AAG H +VT+
Sbjct: 502 TWGRIDGHQVGQPSESFSEDNTVWDERQKPRILIFPTVVPNIEGVVKVAAGTDHSFAVTK 561
Query: 122 AGEVYTWGWRECVPSAKVTRD 142
G+VY+WG+ + + T D
Sbjct: 562 DGKVYSWGFSANYQTGQGTTD 582
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK--VTRDFGSAGSFQKDST 154
P +P + + K AAG H +++ E ++Y WG + A+ + RD GS G Q
Sbjct: 357 PTLVPGLSKIKKLAAGLNHILAMDEKNKIYAWGAGQQAQLARRLLERDEGSTG-LQPTGI 415
Query: 155 GKQSALPTEQAPPSDKRAGEE---VVKRRK-------TSSAREESENPASGDEFFTLSPC 204
G +LP +A P G V+ +K + A E+ + + + P
Sbjct: 416 G---SLP-HRAKPDMIACGSYHSFVIDTKKRVYGWGLNNYAELGIEDGVGQEGSYLMRPQ 471
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS---------------- 248
L+ G KI +A G H+L ++ G++ WG Q+G S
Sbjct: 472 LIEALAGYKIVDIAGGEHHSLACTEDGKLLTWGRIDGHQVGQPSESFSEDNTVWDERQKP 531
Query: 249 RIKMVPTPHLIPCLE---HAASGKDRPLLV-RQGSVNSSG 284
RI + PT ++P +E A+G D V + G V S G
Sbjct: 532 RILIFPT--VVPNIEGVVKVAAGTDHSFAVTKDGKVYSWG 569
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 27/100 (27%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P I EH
Sbjct: 239 PGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAI---EHIKD 294
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
K + IACG H+A++TDM
Sbjct: 295 QK---------------------ISFIACGENHTALITDM 313
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + T HLI
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G V I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197
Query: 297 GGRHSAVVT 305
G HSA VT
Sbjct: 198 GYYHSAFVT 206
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 23/107 (21%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
F T P + KI+ +A G HT +++DMG ++ +G G G+LGLG T
Sbjct: 281 FETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLE---NSTNQ 337
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
IP L R V+ ++CGG H+ V
Sbjct: 338 FIPTL--------------------CSNFLRFIVQLVSCGGCHTLVF 364
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L LS G V+ WG G +G+LG G+R+ DR
Sbjct: 3983 VKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSY-----------------DR 4025
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ + G V ++ACGG HSA +T
Sbjct: 4026 PKLIEE-------LLGTEIV-DVACGGHHSAAIT 4051
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 109/292 (37%), Gaps = 70/292 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVT 120
ALA ++ G++ +WG +D L G +P + + S + A G H ++T
Sbjct: 3008 ALALTQDGRVFSWGEGED---GKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAIT 3064
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVV--- 177
+GE+YTWG G G T Q Q+ G+ V+
Sbjct: 3065 SSGELYTWG-------------LGEYGRLGHGDTNTQLKPKLVQS-----LVGQRVIQVA 3106
Query: 178 ---KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHT 224
+ +T + + + GD F +P LV G+ + ++ G + +
Sbjct: 3107 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFS 3166
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDRPLLVRQ-G 278
L L+ G+VW WG G +LG G+ V P L+ L H A G L V G
Sbjct: 3167 LALTKYGEVWTWGKGDYFRLGHGND-HHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTG 3225
Query: 279 SV-----NSSGKAGR-----------------SYVKEIACGGRHSA--VVTD 306
V N G+ G + V ++CG HS V+TD
Sbjct: 3226 QVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTD 3277
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGW 113
G G + A + SG+L TWG + Y G HG+T P+ V++ A G
Sbjct: 3056 GSGHSAAITSSGELYTWGLGE-----YGRLG-HGDTNTQLKPKLVQSLVGQRVIQVACGS 3109
Query: 114 --AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
A +++T G VY+WG + K+ R GS G + + + L Q +
Sbjct: 3110 RDAQTMALTADGSVYSWGDGDF---GKLGRG-GSDGCYTPLLVDRLNGLGVVQIECGAQF 3165
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + + + G++ P LV G K+ VA G H L ++D G
Sbjct: 3166 SLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTG 3225
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHA 265
QV+ WG GQ G GS I + P L+ L+ A
Sbjct: 3226 QVYAWGDNDHGQQGNGSTI-VNKKPSLVHELDDA 3258
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 76/218 (34%), Gaps = 70/218 (32%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ E+ V+K
Sbjct: 4094 CGSGDAQTLCVTDDDNVWSWGDGD-----YGKLGRGGSDGCKVPMKIESLAGLGVIKVEC 4148
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G V++T +G +YTWG G + + G
Sbjct: 4149 GSQFSVALTRSGSIYTWG----------------KGDYHRLGHG---------------- 4176
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ V + RK ++ + G KI +A G H + SD G
Sbjct: 4177 TDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDKG 4212
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGK 269
+V+ WG EGQLG G+ + P L HA GK
Sbjct: 4213 EVFTWGDNDEGQLGDGTTCALQR-----PRLVHALQGK 4245
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
+K V +GG+H L L+ G+V+ WG G +G+LG G+ S D+
Sbjct: 2996 IKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGN-----------------CSSLDK 3038
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ S K+ R ++++ACG HSA +T
Sbjct: 3039 PRLIE------SLKSKR--IRDVACGSGHSAAIT 3064
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 119/311 (38%), Gaps = 62/311 (19%)
Query: 14 MEECKETVVYMWGY--------LPGTSPEKSPILSPIPARLCGGDSWKDV-CGGGCGFAL 64
+E + + VY+WG L G S K P+ S ++L K V GG
Sbjct: 2903 VETPQHSAVYVWGLNDKDQLGGLKG-SKIKLPVYSESLSKL------KPVHIAGGSKTLF 2955
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEA 122
S+ GKL G + G+ L + P+P P ++ + K A +G H +++T+
Sbjct: 2956 VVSQEGKLYACGEGTN-GRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQD 3014
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
G V++WG E G G S K + + ++ A T
Sbjct: 3015 GRVFSWGEGE----------DGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAIT 3064
Query: 183 SSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVW 234
SS E GD L P LV G ++ +VA G R T+ L+ G V+
Sbjct: 3065 SSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3124
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI 294
WG G G+LG G + G PLLV + +N G V +I
Sbjct: 3125 SWGDGDFGKLGRG-----------------GSDGCYTPLLVDR--LNGLG------VVQI 3159
Query: 295 ACGGRHSAVVT 305
CG + S +T
Sbjct: 3160 ECGAQFSLALT 3170
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 102/266 (38%), Gaps = 23/266 (8%)
Query: 18 KETVVYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ V+ WGY G + + P ++ G V G +LA G + WG
Sbjct: 251 NDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLGLSEVVAVAAGSS-LSLALRSDGTVWAWG 309
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
S D Y G+ + FP+ + V AAG+AH ++V G V+ WG
Sbjct: 310 SND-----YGQRGEGTTSNRAFPVQARGLSGGVAVAAGYAHSLAVRSDGTVWAWG----- 359
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
+ + G + + + L A + + ++ T A + +
Sbjct: 360 --SNASGQLGEGTTSNRSEPVQVQGLSGVVAVSAGASS-SLAIRSDGTVWAWGSNASGQL 416
Query: 195 GDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG-LGSRIK 251
GD T L P V GV V AG +L + + G VWGWGY G GQLG S
Sbjct: 417 GDGTTTDRLVPVQVQGLSGV--VAVVAGTSFSLAVRNDGTVWGWGYNGYGQLGTFTSLFV 474
Query: 252 MVPTPHL-IPCLEHAASGKDRPLLVR 276
+VP + + A+G L VR
Sbjct: 475 LVPVQVTGLSGVVAVAAGNLHSLAVR 500
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 78/199 (39%), Gaps = 23/199 (11%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G + WGS + GQ L G + P + + VV AG + ++
Sbjct: 392 GASSSLAIRSDGTVWAWGS-NASGQ--LGDGTTTDRLVPVQVQGLSGVVAVVAGTSFSLA 448
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE--- 175
V G V+ WG+ +G G+F T +P + S A
Sbjct: 449 VRNDGTVWGWGYN----------GYGQLGTF----TSLFVLVPVQVTGLSGVVAVAAGNL 494
Query: 176 ---VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
V+ T A ++N GD +T V + + VAAG H+L + G
Sbjct: 495 HSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPVQVTGLSGVVSVAAGDSHSLAVRYDGS 554
Query: 233 VWGWGYGGEGQLGLGSRIK 251
VW WGY GQLG GS +
Sbjct: 555 VWAWGYNSFGQLGDGSWFQ 573
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 86/221 (38%), Gaps = 20/221 (9%)
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+A + G L G P + + VV AAAG H +++ G V+ WG+
Sbjct: 9 AAGNNGSGQLGDGTRDNRSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWAWGYN----- 63
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS-- 194
+G G+ S + + S + R + +NP
Sbjct: 64 -----GYGQLGNGSLGSRAEPVQVQGLSGGVSVDAGHYHSLAVRDDGTVWAWGDNPNGQL 118
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
G+ T V + ++ V AG H+L L G VW WG GQLG G+ ++V
Sbjct: 119 GEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGTTTNRLV 178
Query: 254 PTPHL-IPCLEHAASGKDRPLLVR-QGSV-----NSSGKAG 287
P P L + + +G L +R G+V N+SG+ G
Sbjct: 179 PVPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLG 219
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 89/242 (36%), Gaps = 34/242 (14%)
Query: 18 KETVVYMWGYLP-GTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
+ V+ WGY G + + +P ++ G V G +LA G + G
Sbjct: 451 NDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLSGVVAVAAGNL-HSLAVRSDGTVWALG 509
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPS 136
+D GQ L G P + + VV AAG +H ++V G V+ WG+
Sbjct: 510 R-NDNGQ--LGDGSWTNRSAPVQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNS---- 562
Query: 137 AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
FG G D + Q + P + S + G + + R + A G
Sbjct: 563 ------FGQLG----DGSWFQRSAPVQVTGLSGR--GSVAASSDYSMAVRYDGTVWAWGF 610
Query: 197 EFF-----------TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ L P V GV +V G H+L L G VW WGY GQLG
Sbjct: 611 NLYGQLGDGTTSSNQLVPVQVQQLRGVVAVEV--GSSHSLALRSDGTVWTWGYNSFGQLG 668
Query: 246 LG 247
G
Sbjct: 669 NG 670
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 82/234 (35%), Gaps = 49/234 (20%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G + WG G L +G G EP + + V AG H ++V +
Sbjct: 48 SLALRNDGTVWAWGY---NGYGQLGNGSLGSRAEPVQVQGLSGGVSVDAGHYHSLAVRDD 104
Query: 123 GEVYTWG------------WRECVP------SAKVTRDFGSAGSFQKDSTGKQSALPTEQ 164
G V+ WG R VP S V GS+ S S G A
Sbjct: 105 GTVWAWGDNPNGQLGEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGAN- 163
Query: 165 APPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPC-LVTLNPGVKITKVAAGGRH 223
+ + GE R L P ++ L+ ++ V AG H
Sbjct: 164 ---ASGQLGEGTTTNR--------------------LVPVPVLGLS---EVVAVEAGSSH 197
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQ 277
+L L G VW WG GQLG G+ K + ++ + +G L VR
Sbjct: 198 SLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQVLSGVVAMEAGSGYSLAVRN 251
>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 386
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECV-PSAKVTRDFGSAGSFQKDSTGKQSALP 161
+ VV+ +A H +++ G+ ++WG C P + S SF++ + G AL
Sbjct: 205 DVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWNHALL 264
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPA--SGDEFFTLSPCLVTLNPGVKITKVAA 219
EV K T + + E + S + F P GVK+ ++AA
Sbjct: 265 L--------TVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDF----DGVKVMQIAA 312
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G H+ +++ G+V WG+G GQLGLG+
Sbjct: 313 GAEHSAAVTENGEVKTWGWGEHGQLGLGN 341
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 79/195 (40%), Gaps = 14/195 (7%)
Query: 74 TWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWR-- 131
+WG+ D GQ T + P+ L + S+ A G AH +++T G+V+TWG
Sbjct: 19 SWGAGTD-GQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSS 77
Query: 132 -ECVPSAKVTRDFGSAGSFQKDSTGKQSALP-TEQAPPSDKRAGEEVVKRRKTSSAREES 189
+ + SF DS Q+A + SD +
Sbjct: 78 GQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGC--------IFTCGNGSF 129
Query: 190 ENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS- 248
GD +P V+ + VA G RH+L+L QV G+G G GQLG S
Sbjct: 130 GQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD 189
Query: 249 RIKMVPTPHLIPCLE 263
RIK V P ++ L+
Sbjct: 190 RIKSVNLPCVVSGLK 204
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 29/132 (21%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L++L I+ +A GG H + L+ G+V+ WG G GQLG G I + P L+
Sbjct: 37 LLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGD-ILNITLPKLVS 95
Query: 261 CLEHAASGKDRPLLVRQGSVNSSG----------------------------KAGRSYVK 292
+ + + G V+ SG VK
Sbjct: 96 FFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVK 155
Query: 293 EIACGGRHSAVV 304
+ACG RHS V+
Sbjct: 156 MVACGMRHSLVL 167
>gi|91089971|ref|XP_973774.1| PREDICTED: similar to regulator of chromosome condensation
[Tribolium castaneum]
gi|270013683|gb|EFA10131.1| hypothetical protein TcasGA2_TC012311 [Tribolium castaneum]
Length = 477
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 50/186 (26%)
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
FALA ++ G++ WG+A+ + + + + P VV AAG + C+++ E
Sbjct: 307 FALALNDRGEVFGWGNAEYDQIPTINNEQQVSNPVHLKHLKVGKVVDVAAGGSFCLALNE 366
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
GEV+ WG+ + K + T + LP EV+ R
Sbjct: 367 HGEVFVWGYGLVLGGPKA------------EQTSRPRKLP-------------EVLFGRN 401
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
P ++ +VA G + + ++ +G V+ WG
Sbjct: 402 -------------------------DFQPNNRVVQVACGLSYAMAVTSLGDVYAWGRNMR 436
Query: 242 GQLGLG 247
G LGLG
Sbjct: 437 GCLGLG 442
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 22/123 (17%)
Query: 22 VYMWG-----YLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWG 76
V+ WG +P + E+ + +P+ + DV GG F LA +E G++ WG
Sbjct: 317 VFGWGNAEYDQIPTINNEQQ-VSNPVHLKHLKVGKVVDVAAGG-SFCLALNEHGEVFVWG 374
Query: 77 SADDEGQSYLTSGKHGETPEPFPLPT----------EASVVKAAAGWAHCVSVTEAGEVY 126
L K +T P LP VV+ A G ++ ++VT G+VY
Sbjct: 375 YG-----LVLGGPKAEQTSRPRKLPEVLFGRNDFQPNNRVVQVACGLSYAMAVTSLGDVY 429
Query: 127 TWG 129
WG
Sbjct: 430 AWG 432
>gi|428184688|gb|EKX53542.1| hypothetical protein GUITHDRAFT_100528 [Guillardia theta CCMP2712]
Length = 709
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 52/225 (23%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G + S +K P + + + C + CG F LA SE+G++++WGS + G+
Sbjct: 125 GKILSWSAQKEPTIEALRSVPCDVPVSQVACGED--FFLALSEAGRVLSWGS-NKHGELG 181
Query: 86 LTSGKHGETPEPFPLPTEAS--VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDF 143
L+S EP +P S +VK A+G HC +++E +++ WG +
Sbjct: 182 LSSKLSMRMDEPTIVPALQSQRIVKIASGMRHCAALSEEKKLFMWG----------SNMV 231
Query: 144 GSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP 203
G G + + +++ + + S D+ L
Sbjct: 232 GQCGV----------------------KGADSLLEPTRVGAIAGGGGGEGSPDDLVELVA 269
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
C G HT+IL+ G ++ G +GQLG GS
Sbjct: 270 C---------------GHYHTMILTTRGALYSTGLNRDGQLGNGS 299
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLIPCLE 263
V +++VA G L LS+ G+V WG G+LGL S++ M + P ++P L+
Sbjct: 148 VPVSQVACGEDFFLALSEAGRVLSWGSNKHGELGLSSKLSMRMDEPTIVPALQ 200
>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
Length = 854
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWREC------VPSAKVTRDFGSAGSFQKDST----G 155
+ + +AG AH ++++ +G +Y+WG E +K + A QK G
Sbjct: 118 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGG 177
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
SAL T+ AG K + ++E L PCLV G ++T
Sbjct: 178 SHSALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGNRVT 223
Query: 216 KVAAGGRHTL-ILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP 256
++A G HTL +SD G+V+ +G G +GQLG G + +++P P
Sbjct: 224 QIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLP 266
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 104 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLG------------ 151
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ V+ +ACGG HSA++T
Sbjct: 152 ----HTES-KDSPSLIE--------ALDNQKVEFLACGGSHSALLT 184
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3298 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGAL 3352
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3353 HCLAVTDAGQVYAWG 3367
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P+ ++ A G HCV+
Sbjct: 4452 GSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAALQGKKIISIATGSLHCVA 4510
Query: 119 VTEAGEVYTWG 129
++AGEVYTWG
Sbjct: 4511 CSDAGEVYTWG 4521
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4387 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4441
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4442 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4479
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4480 -----------SVDHVRRPKKVAALQ-----------------------GKKIISIATGS 4505
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4506 LHCVACSDAGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4546
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4286 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4328
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P L+ + S V +IACG HSA +T
Sbjct: 4329 PKLLEHLNGMS--------VADIACGSAHSAAIT 4354
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 27/95 (28%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R S D+
Sbjct: 3132 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR-----------------STLDK 3174
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVT 305
P LV +A R+ +++IACG HSA ++
Sbjct: 3175 PRLV---------EALRAKKIRDIACGSSHSAAIS 3200
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA + G+L +WG A G + G P +V A G AHC
Sbjct: 779 AGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ GE++ WG
Sbjct: 839 LALSSNGEIFGWG 851
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 80/217 (36%), Gaps = 53/217 (24%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 3084 AGGSKSLFVVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSG 3140
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG G K G +S L DK
Sbjct: 3141 GKHALALTLDGKVFSWG----------------EGEDGKLGHGNRSTL--------DKPR 3176
Query: 173 GEEVVKRRKTSSAREESENPAS--------------------GDEFFTLSPCLVTLNPGV 212
E ++ +K S + A+ GD L P LVT G
Sbjct: 3177 LVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHGR 3236
Query: 213 KITKVAAGGR--HTLILSDMGQVWGWGYGGEGQLGLG 247
++ +VA G R TL L++ G V+ WG G G+LG G
Sbjct: 3237 RVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG 3273
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3314 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGAL 3368
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3369 HCLAVTDAGQVYAWG 3383
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4402 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4456
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
V+K G V++T++G VYTWG G F + G
Sbjct: 4457 AGLGVIKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHG------ 4494
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
E V+R K +A + G KI +A G
Sbjct: 4495 -----------SVEHVRRPKKVAALQ-----------------------GKKIISIATGS 4520
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4521 LHCVACSDAGEVFTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4561
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4301 VKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4343
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P LV + S V +IACG HSA +T
Sbjct: 4344 PKLVEHLNGMS--------VADIACGSAHSAAIT 4369
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F+LA S G+L +WG A G + G P +V A G AHC
Sbjct: 808 AGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHC 867
Query: 117 VSVTEAGEVYTWG 129
++++ +GE++ WG
Sbjct: 868 LALSSSGEIFGWG 880
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 27/95 (28%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R S D+
Sbjct: 3148 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNR-----------------STLDK 3190
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVT 305
P LV +A R+ +++IACG HSA ++
Sbjct: 3191 PRLV---------EALRAKKIRDIACGSSHSAAIS 3216
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 89/243 (36%), Gaps = 60/243 (24%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDV-CGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
S K P SP +RL + + GG S+ GK+ G + L G
Sbjct: 3080 SKVKVPTFSPTISRL------RPIHIAGGSKSLFVVSQDGKVYACGEGTN---GRLGLGV 3130
Query: 91 HGETPEPFPLPT-EASVVKAAA---GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
P P LP VVK A G H +++T G+V++WG
Sbjct: 3131 THNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG----------------E 3174
Query: 147 GSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS------------ 194
G K G +S L DK E ++ +K S + A+
Sbjct: 3175 GEDGKLGHGNRSTL--------DKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGL 3226
Query: 195 --------GDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGGEGQL 244
GD L P LV G ++ +VA G R TL L++ G V+ WG G G+L
Sbjct: 3227 GEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3286
Query: 245 GLG 247
G G
Sbjct: 3287 GRG 3289
>gi|321262146|ref|XP_003195792.1| hypothetical protein CGB_H3360C [Cryptococcus gattii WM276]
gi|317462266|gb|ADV24005.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 518
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 94/246 (38%), Gaps = 59/246 (23%)
Query: 23 YMWGYLP------GTSPEKSPI-LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW 75
Y++G P G E P+ +SP+ G W + G F L S W
Sbjct: 75 YLFGRPPAMVQSNGVISENIPLKISPLSVGSPEGTKWVNGAAGRSHFLLVDSRGD---VW 131
Query: 76 GSADD-EGQSYL----TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
G ++ GQ L K + P+ EA +V+ AG + +T G+VY G
Sbjct: 132 GCGNNIVGQIGLPVATAVDKLTKVAGPWVRDPEAKIVQVTAGHTFSLFLTSTGQVYASG- 190
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE 190
+ +FG G + + GE +VK K + E
Sbjct: 191 ---------SSEFGQLG---------------------NGKTGERLVKAGKIAYDIE--- 217
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
+ P LV VKI ++A+G +H+L L D G V+ WG+ G +LGL +
Sbjct: 218 ----------VPPRLVQGFENVKIIEIASGNQHSLALDDNGYVYSWGFAGYSRLGLQDQK 267
Query: 251 KMVPTP 256
+ +P
Sbjct: 268 DRLISP 273
>gi|291392039|ref|XP_002712574.1| PREDICTED: alsin [Oryctolagus cuniculus]
Length = 1650
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 94/229 (41%), Gaps = 47/229 (20%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G TPE FP V++AA G H V +TE GEVY++G WR E PS+ +
Sbjct: 25 AGSFSVTPERFPGWGGKPVLQAALGVKHGVLLTEDGEVYSFGTLPWRSEPAEVCPSSPIL 84
Query: 141 RDFGSAGSFQKDSTGK-QSALPTEQAPPS---DKRAGEEVVKRRKTSSAREESENPASGD 196
+ +TG S TE + AG+ V ++ NP S
Sbjct: 85 ENALVGQRVVTVATGSFHSGAVTEGGVVYMWGENSAGQCAVANQRCVP----EPNPVSIS 140
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+ + SP L V+I ++A G HTL LS ++W WG G QLGL + V P
Sbjct: 141 DSDS-SPLL-----AVRILQLACGEEHTLALSISREIWAWGTG--CQLGLITTTFPVTKP 192
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ EH AGR V ++ACG HS +
Sbjct: 193 QKV---EHL--------------------AGR-VVLQVACGAFHSLALV 217
>gi|213514362|ref|NP_001133817.1| Williams-Beuren syndrome chromosomal region 16 protein homolog
[Salmo salar]
gi|209155436|gb|ACI33950.1| Williams-Beuren syndrome chromosomal region 16 protein homolog
[Salmo salar]
Length = 450
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 80/215 (37%), Gaps = 43/215 (20%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQK 151
++ V + G H + +TE G+VY GW C V D Q+
Sbjct: 215 DSPVTQVVCGQDHSLFLTETGKVYACGWGADGQTGLGHHNMCARPVAVGGDLAGV-RVQQ 273
Query: 152 DSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG 211
+T ++ Q E ++ + A + + SP L+
Sbjct: 274 VTTYGDCSMAVSQDGQLYGWGNSEYLQLSSVTEATQIN------------SPRLLPFERV 321
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
K+T+VA GG IL++ G+V+ WGY G LG G + TP L+P
Sbjct: 322 GKVTQVACGGTQVAILNERGEVFVWGY---GILGKGPNLSESQTPELVP----------- 367
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P L + N + R I CG H A VTD
Sbjct: 368 PALFGRSEFNPAVTVSR-----IHCGLNHFAAVTD 397
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 50/187 (26%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
++A S+ G+L WG+++ S +T +P P V + A G + E
Sbjct: 281 SMAVSQDGQLYGWGNSEYLQLSSVTEATQINSPRLLPFERVGKVTQVACGGTQVAILNER 340
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEV+ WG+ G K +S P E PP+
Sbjct: 341 GEVFVWGY----------------GILGKGPNLSESQTP-ELVPPA-------------- 369
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
R E NP V ++++ G H ++D G+++ WG G
Sbjct: 370 LFGRSE-------------------FNPAVTVSRIHCGLNHFAAVTDRGELFVWGKNVRG 410
Query: 243 QLGLGSR 249
LG+G +
Sbjct: 411 CLGIGKK 417
>gi|242054259|ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
gi|241928250|gb|EES01395.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
Length = 560
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 57/151 (37%), Gaps = 54/151 (35%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--ALPTE 163
VV AAG AH +++T G+VY+WG G F + TG++ +PT
Sbjct: 5 VVAVAAGEAHTLALTGDGQVYSWG----------------RGPFGRLGTGREDDELVPTA 48
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
AP A G P + VAAG H
Sbjct: 49 VAPAVS-----------------------AGG-------------TPRPRFVAVAAGAYH 72
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
+L L D G +W WGY GQLG G + + P
Sbjct: 73 SLALDDEGSLWSWGYNLYGQLGYGDQNSLFP 103
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLEHAASGKDR 271
K+ VAAG HTL L+ GQV+ WG G G+LG G ++VPT + P + +A G R
Sbjct: 4 KVVAVAAGEAHTLALTGDGQVYSWGRGPFGRLGTGREDDELVPTA-VAPAV--SAGGTPR 60
Query: 272 PLLV 275
P V
Sbjct: 61 PRFV 64
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
I V+ G HTL L+D GQV+ WG G GQLGL + + V P I CL
Sbjct: 86 IVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCL 134
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 43/225 (19%)
Query: 42 IPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+ R C K VC GCG + + G + T G +D GQ L K + PE
Sbjct: 23 VEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEHVV 79
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+V + G +H +++ + G+V++WG GS G ++ +
Sbjct: 80 ALDAQIIVAVSCGESHTLALNDKGQVFSWG-------------LGSNGQLGLNNFEECVR 126
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL------------------ 201
+P SD V+ + + S + G + F+
Sbjct: 127 VPRNIKCLSD-------VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
+P ++ G+ +++AGG H+ ++ G V+GWG GQLGL
Sbjct: 180 TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGL 224
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 28/124 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
V+I +VA G H+ LS GQV+ WG GQLGLG + TP + IP + +
Sbjct: 137 VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLS 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRHSAV 303
A G + G+V N G+ G + K+ ++CG H+A
Sbjct: 197 AGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAA 256
Query: 304 VTDM 307
+T +
Sbjct: 257 LTKL 260
>gi|328873577|gb|EGG21944.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 736
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 206 VTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
+ + PGV+ + V+ G HTL L G+V+ WG G +G+LGLG+ MV TP ++P
Sbjct: 94 MQVRPGVQFSMVSCGNEHTLALDGTGRVFSWGNGSKGRLGLGNESTMV-TPCILP 147
>gi|390345136|ref|XP_782013.3| PREDICTED: transient receptor potential cation channel subfamily A
member 1-like [Strongylocentrotus purpuratus]
Length = 1336
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
+V++ G ++ +A G +L + D G+V+GWGY G GQLGLG+ + P+P
Sbjct: 933 VVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQ-PSP 983
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 108/266 (40%), Gaps = 56/266 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK------AAAG 112
G + A + G+L WG + GQ L GK P PLPT+ +K AA G
Sbjct: 125 GYNHSCAITVDGELYMWGK-NTSGQ--LGLGK--RAPNIVPLPTKVEYLKGINIKMAALG 179
Query: 113 WAHCVSVTEAGEVYTWGWRECV-----PSAKVTRDFGSAGSFQ----KDSTG---KQSAL 160
H V++++ G ++WG + V F S + KD G K A
Sbjct: 180 SEHSVAISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAA 239
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAG 220
+ +D+ V R R + + A+ P L++ P K +VA G
Sbjct: 240 GLLNSACTDENGCVFVFGERGIEKLRLKEMSDAT-------KPSLISELPSSK--EVACG 290
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
G HT +L++ G+++ WG G LG+GS ++ P + P L
Sbjct: 291 GYHTCVLTNSGELYTWGSNENGCLGIGSS-DVIHLPEKV----------QGPFL------ 333
Query: 281 NSSGKAGRSYVKEIACGGRHSAVVTD 306
+S V +++CG +H+A +++
Sbjct: 334 -------KSSVSQVSCGWKHTAAISE 352
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET 94
K ++S +P S K+V GG + T+ SG+L TWGS ++ G + S
Sbjct: 274 KPSLISELP-------SSKEVACGGYHTCVLTN-SGELYTWGS-NENGCLGIGSSDVIHL 324
Query: 95 PEPFPLP-TEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
PE P ++SV + + GW H +++E G V+TWGW
Sbjct: 325 PEKVQGPFLKSSVSQVSCGWKHTAAISE-GRVFTWGW 360
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 41/260 (15%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CGG L +E G + G +D GQ ++ KH E VV+ +AG+ H
Sbjct: 72 CGGA--HTLFLTEDGCVYATG-LNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNH 128
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRD-----FGSAGSFQKDSTGKQSALPTEQAPPSDK 170
++T GE+Y WG R + + K K +AL +E +
Sbjct: 129 SCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISD 188
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFT----LSPCLVTLNPGVKITKVAAGGRHTLI 226
G S R + +S FF +P L+ G+K+ VAAG ++
Sbjct: 189 --GGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSAC 246
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
+ G V+ +G G +L R+K + S +P L+ + + SS
Sbjct: 247 TDENGCVFVFGERGIEKL----RLKEM-------------SDATKPSLISE--LPSS--- 284
Query: 287 GRSYVKEIACGGRHSAVVTD 306
KE+ACGG H+ V+T+
Sbjct: 285 -----KEVACGGYHTCVLTN 299
>gi|170067991|ref|XP_001868696.1| NIMA-family kinase NERCC1 [Culex quinquefasciatus]
gi|167864123|gb|EDS27506.1| NIMA-family kinase NERCC1 [Culex quinquefasciatus]
Length = 738
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 85/226 (37%), Gaps = 58/226 (25%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG--------------WRECVPSAKVTRD 142
P LP + + A H V V G VYTWG WR + R
Sbjct: 402 PLQLPPTGKIRQLATQGTHFVVVMYDGSVYTWGEGNKGQLGHNALETWRHYPTKIESIRR 461
Query: 143 FGSAGSFQKDSTGKQSALP-TEQAPPSDKRAGEEVVKRRKTSSAREESEN-PASGDEFFT 200
+ G+ +TG L T+ S + +E G+
Sbjct: 462 YNVVGA----ATGNGFTLLWTDLGV---------------VLSCGDNTEGCLGHGNTISL 502
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P +V ++I ++A G H + LSD G ++ WG EG LGLG H++
Sbjct: 503 LIPKIVHKLTNMRIVQIACGEHHVVALSDEGDLFTWGTSNEGALGLGK--------HML- 553
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+S + R L+V Q N +++I+CG + V+TD
Sbjct: 554 -----SSNEPRRLIVSQMIQN---------IRQISCGPDCTVVLTD 585
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 77/218 (35%), Gaps = 17/218 (7%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G + +E G + TWG + + + P P A G H
Sbjct: 42 GAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHT 101
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS-------D 169
V VT+ G +YTWG G G+ S+ + + PS +
Sbjct: 102 VVVTDNGLIYTWG----------ENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGE 151
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
++ S R + G+ P V + A GG+HTL+L+D
Sbjct: 152 FHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTD 211
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
+++ WG GQLGL K V P ++ L + +
Sbjct: 212 ANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGA 249
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 24/94 (25%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
+ + AG H+ ++++ G V+ WG G EGQLG ++ PH++P +E+ S
Sbjct: 37 NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGS----- 91
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ACG H+ VVTD
Sbjct: 92 -------------------SAVACGRNHTVVVTD 106
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 30/121 (24%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI------PCLEHAASG 268
+ VA G HT++++D G ++ WG GQLG G +K +P LI P + A G
Sbjct: 92 SAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGD-LKSSNSPVLIDSALNLPSVLSIACG 150
Query: 269 KDRPL-LVRQGSV-----NSSGKAGRSYVK-----------------EIACGGRHSAVVT 305
+ + + +G++ N G+ G K ACGG+H+ V+T
Sbjct: 151 EFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLT 210
Query: 306 D 306
D
Sbjct: 211 D 211
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 27/106 (25%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG G +G+LG G+R +
Sbjct: 3256 TPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQC------- 3308
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
DRP ++ + GK V +IACGG HSA VT
Sbjct: 3309 ----------DRPRVIE----SLRGKE----VIDIACGGAHSACVT 3336
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
VC CG F++A ++SG + TWG D + S H P ++ A G
Sbjct: 3428 VCKVECGSQFSIALTKSGCVYTWGKGDYHRLGH-GSDDHVRRPRKVAALQGKKIISIATG 3486
Query: 113 WAHCVSVTEAGEVYTWG 129
HCV+ ++ GEVYTWG
Sbjct: 3487 SLHCVACSDQGEVYTWG 3503
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 19 ETVVYMWGYL-------PGTSPEKSPILSPIPARLCGGDSWKDVC-GGGCGFALATSESG 70
+T V++WG P S K+P+L+ + L K VC GG + G
Sbjct: 2205 QTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSL------KVVCCAGGSKSLFVVTAEG 2258
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAA--AGWAHCVSVTEAGEVYTW 128
K+ G + G+ L S ++ + P+ ++ V K A +G H +++T G+V++W
Sbjct: 2259 KVYACGEGTN-GRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSARE- 187
G D G G + + K L + A TSS
Sbjct: 2318 G----------EGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELY 2367
Query: 188 -----ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HTLILSDMGQVWGWGYGG 240
E GD L P LV G ++ +VA G R TL L+D G V+ WG G
Sbjct: 2368 TWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427
Query: 241 EGQLGLG 247
G+LG G
Sbjct: 2428 FGKLGRG 2434
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GGRH + L+ G+V+ WG G +G+LG SR+ P L+ L
Sbjct: 2293 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMN-CEKPRLLEAL--------- 2342
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
K R +++IACG HSA VT
Sbjct: 2343 -------------KTKR--IRDIACGSSHSAAVT 2361
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 76/212 (35%), Gaps = 66/212 (31%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG----ETPEPFPLPTEASVVKAAA 111
CG G L S+ + +WG D Y G+ G + P+ + V K
Sbjct: 3379 CGSGDSQTLCISDDDNVWSWGDGD-----YGKLGRGGSDGCKVPQKVDALSSIGVCKVEC 3433
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G +++T++G VYTWG G + + G
Sbjct: 3434 GSQFSIALTKSGCVYTWG----------------KGDYHRLGHG---------------- 3461
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
+ + V + RK ++ + G KI +A G H + SD G
Sbjct: 3462 SDDHVRRPRKVAALQ------------------------GKKIISIATGSLHCVACSDQG 3497
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
+V+ WG EGQLG G+ + P ++ L+
Sbjct: 3498 EVYTWGDNDEGQLGDGT-TNAIQRPRIVTALQ 3528
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVKAAAGWA 114
G F+LA +++G++ TWG D Y G H P+ ++ A G
Sbjct: 2459 GAQFSLALTKAGQVWTWGKGD-----YFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGAL 2513
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+ G+V+ WG
Sbjct: 2514 HCLAVTDTGQVFAWG 2528
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 98/256 (38%), Gaps = 46/256 (17%)
Query: 26 GYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSY 85
G+L + EK +L + + +D+ G A TS SG+L TWG + Y
Sbjct: 2326 GHLSRMNCEKPRLLEALKTK-----RIRDIACGSSHSAAVTS-SGELYTWGLGE-----Y 2374
Query: 86 LTSGKHGETPEPFPLPTEA----SVVKAAAGW--AHCVSVTEAGEVYTWGWRECVPSAKV 139
G T + P +A V++ A G A +++T+ G VY+WG
Sbjct: 2375 GRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWG---------- 2424
Query: 140 TRDFGSAGS---------FQKDSTGKQSALPTE---QAPPSDKRAGEEVVKRRKTSSARE 187
DFG G + Q + E Q + +AG+ + +
Sbjct: 2425 DGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQ------VWTWGKG 2478
Query: 188 ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+ G + P + G KI VA G H L ++D GQV+ WG GQ G G
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDG 2538
Query: 248 SRIKMVPTPHLIPCLE 263
S + P L+ LE
Sbjct: 2539 S-TTVNKKPALVQGLE 2553
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAA 110
K G ALA S G++ +WG +D L G + P + + V+ A
Sbjct: 3270 KVAVNSGGKHALALSVEGEVYSWGEGED---GKLGHGNRTQCDRPRVIESLRGKEVIDIA 3326
Query: 111 AGWAHCVSVTEAGEVYTWG 129
G AH VT +GE+YTWG
Sbjct: 3327 CGGAHSACVTSSGELYTWG 3345
>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
Length = 513
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
GV++ VA+G H+L+++ G++W WG +GQLG G IK + P LI L+
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLKGEVFV 196
Query: 264 HAASGKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
HAA G++ L L GSV + G+ + + ++ G + AV
Sbjct: 197 HAACGRNHTLALTENGSVYAFGE---NKMGQLGLGNKTDAV 234
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P L+ G A G HTL L++ G V+ +G GQLGLG++ VP+P I
Sbjct: 184 PKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI 240
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P V + +A G H+LIL +V+ WG+GG G+LG R +MVP
Sbjct: 319 PNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
>gi|374262009|ref|ZP_09620582.1| hypothetical protein LDG_6983 [Legionella drancourtii LLAP12]
gi|363537417|gb|EHL30838.1| hypothetical protein LDG_6983 [Legionella drancourtii LLAP12]
Length = 542
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 24/117 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPC--LEHAASGK 269
KI ++A G HTL++++ V+ GY GQLG G ++ K+V TP IP + G+
Sbjct: 226 KILQIACGAAHTLMVTE-KSVYATGYNAFGQLGTGDKLNKLVFTPVTIPADRILKVVCGQ 284
Query: 270 DRPLLVRQGSV-----NSSGKAGRSY---------------VKEIACGGRHSAVVTD 306
L+ + V N SG+ G ++ IACG HS V+T+
Sbjct: 285 FHSLIASENQVYATGCNYSGQLGTKNNVAISTFTAVTLPGKIRHIACGDCHSVVITE 341
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 26/101 (25%)
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
LN +I +++ G +HTLI++ G V+ G GQLGLG +
Sbjct: 170 LNEDDEIQEISCGKKHTLIVTKKGVVYATGSNTSGQLGLGDEL----------------- 212
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDMS 308
DR +V+ + +IACG H+ +VT+ S
Sbjct: 213 --DRNTFTEVATVSEK-------ILQIACGAAHTLMVTEKS 244
>gi|194701680|gb|ACF84924.1| unknown [Zea mays]
gi|414886543|tpg|DAA62557.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 432
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 108/296 (36%), Gaps = 68/296 (22%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
PE P L+P P RL S +D G G + S L+ G+ G
Sbjct: 65 PESDPRLAPTPGRL---PSAEDTSGVEVGISCGLFHSSLLVEGGAWVWGKGDGGRLGLGD 121
Query: 93 ETPE--PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW------------RECVP--- 135
E+ P P + A G H ++T +G+V+TWG+ RE +P
Sbjct: 122 ESSAFVPHSNPNLRDLRLLALGGIHSAALTTSGDVFTWGYGGFGALGHHVYHRELLPRQV 181
Query: 136 ----SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESEN 191
K+T ++G +A T+ +GE R R +
Sbjct: 182 NGPWEGKIT---------HISTSGAHTAAITD--------SGELYTWGRDEGDGRLGLGS 224
Query: 192 PASGDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
E +LS P V P V + VA GG T+ L+ GQ+W WG +LG GS
Sbjct: 225 GGGPGEAGSLSVPSKVNALP-VPVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSNF 283
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P L+P L+ + V ++ACGG HS +TD
Sbjct: 284 SDW-RPQLVPSLK------------------------STRVIQVACGGYHSLALTD 314
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 105/281 (37%), Gaps = 38/281 (13%)
Query: 10 ENEKMEECKETVVYMWGYL------PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA 63
+ + E V+ WG+ GT+ +K+ P ++ G S V G ++
Sbjct: 59 QYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKAA-----PVQVAGVASAVSVAAGDQ-YS 112
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA E+G + WG D L G +P + V A+G+AH V++ G
Sbjct: 113 LALDENGDVWAWG---DNASGQLGDGTLTPRAQPRRVSGLTQGVSLASGFAHAVALRADG 169
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVKR 179
V+ WG + GSA T +S +P SD A G +
Sbjct: 170 TVWAWG-------DNRSNQLGSA-------TLTRSPVPIPVPGLSDIVAVVAGGSSSLAL 215
Query: 180 RKTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWG 237
R + +N GD V + +T ++AG H L L G W WG
Sbjct: 216 RADGTVWAWGDNRYGQLGDGTTVRRAAPVRVANLDAVTHISAGAYHALALRADGTAWAWG 275
Query: 238 YGGEGQLGLGSRIKMVPTPHLIPCLE--HAASGKDRPLLVR 276
Y GQLG G+ ++ P LI E +G L VR
Sbjct: 276 YNAFGQLGDGTTVQRT-LPVLIGLTETRTVVAGNYHSLAVR 315
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 24/229 (10%)
Query: 69 SGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTW 128
+G+L WG D Q L +G + P P+ + ++G H ++ G V++W
Sbjct: 417 NGRLWAWG---DNNQGQLGNGTQQNSSLPLPVNLTG-ITSVSSGHRHTAALRLDGTVWSW 472
Query: 129 GWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREE 188
G T +G G + +P S + R +
Sbjct: 473 G----------TNQYGQLGDGTRTDRSTPVQVPGLTGVTSIATGDYHSLALRSNGTVWGW 522
Query: 189 SENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
N GD V ++ I +AAGG H+L L G VW +GY +GQLG
Sbjct: 523 GFNRYGQLGDGTTVDRTQPVQVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGN 582
Query: 247 GSRI-KMVPTPHL-IPCLEHAASGKDRPLLVR-QGSV-----NSSGKAG 287
G+R ++P + + + A+GK L +R G+V N+SG+ G
Sbjct: 583 GTRTWTILPVQAVGLGNVVSLAAGKMYSLALRADGTVWAWGYNASGQLG 631
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAA---SGKD 270
IT + AG H+L L G VW WG+ EGQLG G+ + TP L+ + +A +G
Sbjct: 650 ITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRL-TPGLVVSMSNATAIFAGDL 708
Query: 271 RPLLVR 276
L VR
Sbjct: 709 HSLAVR 714
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 79/221 (35%), Gaps = 40/221 (18%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P P LS I A + GG S +LA G + WG D L G
Sbjct: 193 PIPVPGLSDIVAVVAGGSS-----------SLALRADGTVWAWG---DNRYGQLGDGTTV 238
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P + +V +AG H +++ G + WG+ FG G D
Sbjct: 239 RRAAPVRVANLDAVTHISAGAYHALALRADGTAWAWGYNA----------FGQLG----D 284
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF------TLSPCLV 206
T Q LP + V + + R + A GD + L+ V
Sbjct: 285 GTTVQRTLPVLIGLTETRTV---VAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAV 341
Query: 207 TLNPGVK--ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
L+ G+ +T VA G RH++ L G W WG GQLG
Sbjct: 342 PLHAGMTGGVTLVA-GFRHSVALGADGTAWSWGDNVFGQLG 381
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 33/217 (15%)
Query: 41 PIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
P+P L G S G A G + +WG+ + GQ L G + P +
Sbjct: 442 PLPVNLTGITS----VSSGHRHTAALRLDGTVWSWGT-NQYGQ--LGDGTRTDRSTPVQV 494
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P V A G H +++ G V+ WG+ +G G D T
Sbjct: 495 PGLTGVTSIATGDYHSLALRSNGTVWGWGFNR----------YGQLG----DGTTVDRTQ 540
Query: 161 PTEQAPPSD----KRAGEEVVKRRKTSSAREESEN----PASGDEFFTLSPC-LVTLNPG 211
P + + ++ G + R + N +G +T+ P V L
Sbjct: 541 PVQVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVGLG-- 598
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+ +AAG ++L L G VW WGY GQLG+G+
Sbjct: 599 -NVVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGT 634
>gi|348579534|ref|XP_003475534.1| PREDICTED: RCC1 domain-containing protein 1-like [Cavia porcellus]
Length = 373
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 43/199 (21%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA + +
Sbjct: 163 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEMELEPRLLEALQGLPMAQ 211
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V V+E ++Y WGW E S ++ S ++ TG+ L E
Sbjct: 212 VAAGGWHSVCVSETRDLYVWGWNE---SGQLALPARSLAEDKRTVTGEGKGLNQE----- 263
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSP--CLVTLNPGVKITKVAAGGRHTLI 226
G EV + A E PA F + P L+ L G + + G RHT +
Sbjct: 264 ----GSEV-----ETVAGTEDGAPAP---FIAVQPFPALLDLPLGSEAVGASCGSRHTAV 311
Query: 227 LSDMGQVWGWGYGGEGQLG 245
++ G+++ WG+G GQLG
Sbjct: 312 VTRTGELYTWGWGKYGQLG 330
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 13/185 (7%)
Query: 89 GKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FGSAG 147
G+ + P PL T + +A W++ VT G V G +A RD + S
Sbjct: 24 GRRCQVLSPEPLKTRRDICHVSASWSYTALVTRGGCVELSG--SVSGTAGGCRDVWASER 81
Query: 148 SFQKDSTGKQSALPTEQAPPSDKRAGEEV-VKRRKTSSAREESENPASGDEFFTLSPCLV 206
G S + + P GE + + + A +E P S V
Sbjct: 82 LLVLLRDGPGSRVELQAWAPGSVLHGEPLWAQDPEAKGAALSAEAPVGTLPLLPSSHVYV 141
Query: 207 T--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
+ L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++M P L
Sbjct: 142 SPWPPFRHCLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEMELEPRL 200
Query: 259 IPCLE 263
+ L+
Sbjct: 201 LEALQ 205
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 62/203 (30%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V++ A G + VS+T GEVY +G + +G + +T +
Sbjct: 594 VIQVACGVLNTVSLTNGGEVYVFG----------SNAYGQLAKDKDQTTFR--------- 634
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPG---VKITKVAAGGR 222
K ++ S A + SE + L+ PG V+I +A GG
Sbjct: 635 ----KYKKQDQNNNNDNSQALDSSEQMS-----------LIKF-PGETTVRINYIACGGE 678
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H +S M +++GWG EGQLGLG P LI + H
Sbjct: 679 HIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKN---------------- 722
Query: 283 SGKAGRSYVKEIACGGRHSAVVT 305
++ IACG +SA V+
Sbjct: 723 --------IQMIACGDNYSAAVS 737
Score = 40.8 bits (94), Expect = 0.75, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 22/92 (23%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
IT+VA G H L +++ +++ WG G G LG G+R + HLI KD
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLI------IEKKDYTY 344
Query: 274 LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+++ IACG HS +T
Sbjct: 345 ----------------FIEGIACGKYHSMCLT 360
>gi|363737854|ref|XP_001233548.2| PREDICTED: uncharacterized protein LOC770213 [Gallus gallus]
Length = 187
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 57/141 (40%), Gaps = 26/141 (18%)
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AA GW H V++ G++Y WGW E +R A+ EQA
Sbjct: 5 AAGGW-HSACVSDGGDLYVWGWNESGQLGLPSR-----------------AVAEEQAEDE 46
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILS 228
D AG E E P + P L+ L + V+ G RHT L+
Sbjct: 47 DMGAGPE--------DPLLPGEPPGAAFISIQAFPALLDLPLEPAVAAVSCGSRHTAALT 98
Query: 229 DMGQVWGWGYGGEGQLGLGSR 249
G+++ WG+G GQLG G R
Sbjct: 99 RGGELYTWGWGKYGQLGHGDR 119
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPL 273
+ VAAGG H+ +SD G ++ WG+ GQLGL SR E +G + PL
Sbjct: 1 MRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLPSRAVAEEQAE----DEDMGAGPEDPL 56
Query: 274 LVRQ--GSVNSSGKAGRSY--------VKEIACGGRHSAVVT 305
L + G+ S +A + V ++CG RH+A +T
Sbjct: 57 LPGEPPGAAFISIQAFPALLDLPLEPAVAAVSCGSRHTAALT 98
>gi|302915457|ref|XP_003051539.1| hypothetical protein NECHADRAFT_37767 [Nectria haematococca mpVI
77-13-4]
gi|256732478|gb|EEU45826.1| hypothetical protein NECHADRAFT_37767 [Nectria haematococca mpVI
77-13-4]
Length = 598
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 121/322 (37%), Gaps = 71/322 (22%)
Query: 22 VYMWGYLPG--TSPEKSPILSPIPARLCGGDS--WKDVCGGGCGFALATSESGKLITWGS 77
VY WG G P+ + +P R+ D +D+ F A +E G L+ WG
Sbjct: 119 VYAWGSNIGKVIDPKSNDKYVKLPHRIAYFDDQVLRDLKLTSV-FGAAVTEKGDLVQWG- 176
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
G + E P P T +VK ++++ G+VY+ +PS+
Sbjct: 177 ----------LGYNKEDPSPVATLTGKDLVKIDVSLDRIIALSRNGKVYS------IPSS 220
Query: 138 KVTRDFGSAGSFQKD------STGKQSALPTEQAPPSDKRAGEEVV-------------- 177
+ ++ G QK S G + + PS GE V
Sbjct: 221 RDDQEGGLKEEQQKSSWSIWGSGGGKERINFRNLTPSGLSYGESVTDISSGLEHCLMLTS 280
Query: 178 KRRKTSSAREESENPASGDEF-------------FTLSPCLVTLNPGVKITKVAAGGRHT 224
K R S+A E P+ G + ++TL G + +VA G H+
Sbjct: 281 KGRVFSAASSALEFPSKGQMGVPGLSWSNRPKGPYDQPHEVITLR-GFDVAQVATGDYHS 339
Query: 225 LILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
+IL +G+++ +G GQLG+ + +H D P+++ ++ SS
Sbjct: 340 VILDKLGRIFTFGDNSFGQLGIDT--------------DHGLLTSDTPVMMPVNTLYSSS 385
Query: 285 KAGRSYVKEIACGGRHSAVVTD 306
+ VK IA GG ++ D
Sbjct: 386 GLVPT-VKTIAAGGNNTFFTVD 406
>gi|218202624|gb|EEC85051.1| hypothetical protein OsI_32385 [Oryza sativa Indica Group]
Length = 624
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 108/293 (36%), Gaps = 58/293 (19%)
Query: 33 PEKSPILSPIPARLCGGDSWKDV-----CGGGCG-FALATSESGKLITWGSADDEGQSYL 86
P+ +P+LSP P RL + G CG F A G WG D
Sbjct: 66 PDPAPVLSPTPGRLPDAAAAGTAAGAVEVGISCGLFHSAVVVDGGAWVWGKGDGGRLGLG 125
Query: 87 TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSA 146
P P +E V+ A G H ++T +GEV+TWG+ FG+
Sbjct: 126 DESS-AFVPRHNPNLSELRVL--ALGGIHSAALTASGEVFTWGYG----------GFGAL 172
Query: 147 GSFQKDST-----------GKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPAS 194
G + GK S + T A + +GE R R +
Sbjct: 173 GHYVYHRELLPRKVNGPWEGKISHIATSGAHTAAITDSGELYTWGRDEGDGRLGLGSGGG 232
Query: 195 GDEFFTLS-PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
E +LS P V P V + VA GG T+ L+ GQ+W WG +LG GS
Sbjct: 233 PGEAGSLSVPSKVNPLP-VSVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSN-SSD 290
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
P LIP L++ +V ++ACGG HS +TD
Sbjct: 291 WRPQLIPSLKNL------------------------HVIQVACGGYHSLALTD 319
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 67/178 (37%), Gaps = 11/178 (6%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A + SG++ TWG + + P P E + A AH ++T++GE
Sbjct: 154 ALTASGEVFTWGYGGFGALGHYVYHRE-LLPRKVNGPWEGKISHIATSGAHTAAITDSGE 212
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP------SDKRAGEEVVK 178
+YTWG E + G + K + LP A + + +
Sbjct: 213 LYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNPLPVSVAAVACGGFFTMALTSDGQLW 272
Query: 179 RRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
+S E S D L P L L+ + +VA GG H+L L+D G V W
Sbjct: 273 SWGANSNFELGRGSNSSDWRPQLIPSLKNLH----VIQVACGGYHSLALTDEGVVLSW 326
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 107/284 (37%), Gaps = 39/284 (13%)
Query: 22 VYMWGY-LPG------TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLIT 74
V+ WGY G T+P +P+ P + S G +LA G +
Sbjct: 117 VWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDVVALSS-------GIYHSLALRTDGTVWA 169
Query: 75 WGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECV 134
WG D L G P +P VV +AG H ++V G V+ WG
Sbjct: 170 WG---DNASGQLGDGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWG----- 221
Query: 135 PSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
+ + G + + S + S L A +D ++ T A +
Sbjct: 222 --SNFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSY-TLALRTDGTVWAWGYNSYGQL 278
Query: 195 GDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG---S 248
GD T LSP V PG+ + ++AG H+L L G VW WGY GQLG G
Sbjct: 279 GDGTTTPRLSPVQV---PGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ 335
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAG 287
R +P LI + +A L G+V NS G+ G
Sbjct: 336 RSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLG 379
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 103/263 (39%), Gaps = 36/263 (13%)
Query: 9 EENEKMEECKETVVYMWGYLP-------GTSPEKSPILSPIPARLCGGDSWKDVCGGGCG 61
+++ + + V+ WGY T+P SP+ P + G
Sbjct: 254 DDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGLTNVV-------ALSAGYS 306
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+LA G + WG + GQ L +G + P+ VV +AG++H +++
Sbjct: 307 HSLALRTDGTVWAWG-YNYNGQ--LGNGIPTQRSPSIPVFGLIDVVALSAGYSHSLALRT 363
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G V+ WG+ G + + S + L T+ S + ++
Sbjct: 364 DGTVWAWGYNSL-------GQLGDGTTIPRPSPVQVPDL-TDVVALSAGDSHSLALRTDG 415
Query: 182 TSSAREESENPASGDEFFT--LSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGY 238
T A + + GD T LSP V P + + ++AGG HTL L G VW WG
Sbjct: 416 TVRAWGVNYSGQLGDGTTTHRLSPVQV---PDLTDVVALSAGGNHTLALRTNGTVWAWGS 472
Query: 239 GGEGQLGLGSRIKMVPTPHLIPC 261
+GQLG G+ TP L P
Sbjct: 473 NSDGQLGDGTT-----TPRLSPV 490
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 95/247 (38%), Gaps = 45/247 (18%)
Query: 32 SPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKH 91
SP + P L+ + A GG+ LA +G + WGS D GQ L G
Sbjct: 438 SPVQVPDLTDVVALSAGGN-----------HTLALRTNGTVWAWGSNSD-GQ--LGDGTT 483
Query: 92 GETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQK 151
P + +VV +AG+ H ++V G V+ WG + G G
Sbjct: 484 TPRLSPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWG----------SNSDGQLG---- 529
Query: 152 DSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSAREESENPAS--GDEFFTL--SP 203
D T P + +D A + R + N +S GD T SP
Sbjct: 530 DGTTTHRLTPVQVPGLTDVVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSP 589
Query: 204 CLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
V PG+ + ++AGG H+L L G VW WG GQLG G+ TP L P L
Sbjct: 590 VQV---PGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTT-----TPRLFPVL 641
Query: 263 EHAASGK 269
+G
Sbjct: 642 VSNLTGT 648
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH--AASGK 269
+ + ++AG H+L L G VW WGY GQLG G+ I P+P +P L A S
Sbjct: 346 IDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPR-PSPVQVPDLTDVVALSAG 404
Query: 270 DRPLL-------VRQGSVNSSGKAG 287
D L VR VN SG+ G
Sbjct: 405 DSHSLALRTDGTVRAWGVNYSGQLG 429
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 111/301 (36%), Gaps = 51/301 (16%)
Query: 11 NEKMEECKETVVYMWGYL------PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFA- 63
+ + + V+ WGY G ++SP + P+ + DV G++
Sbjct: 306 SHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSI-PVFGLI-------DVVALSAGYSH 357
Query: 64 -LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
LA G + WG + GQ L G P P +P VV +AG +H +++
Sbjct: 358 SLALRTDGTVWAWG-YNSLGQ--LGDGTTIPRPSPVQVPDLTDVVALSAGDSHSLALRTD 414
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVK 178
G V WG + G D T P + +D A G +
Sbjct: 415 GTVRAWG-------VNYSGQLG-------DGTTTHRLSPVQVPDLTDVVALSAGGNHTLA 460
Query: 179 RRKTSSAREESENPAS--GDEFFT--LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
R + N GD T LSP V + + ++AG H+L + G VW
Sbjct: 461 LRTNGTVWAWGSNSDGQLGDGTTTPRLSP--VQMLGLTNVVALSAGYYHSLAVHTDGTVW 518
Query: 235 GWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKA 286
WG +GQLG G+ R+ V P L + +A L G+V NSS +
Sbjct: 519 AWGSNSDGQLGDGTTTHRLTPVQVPGLTDVVALSAGDSHSLALRTDGTVWAWGSNSSSQL 578
Query: 287 G 287
G
Sbjct: 579 G 579
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 38/224 (16%)
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
AAG++H +++ G V+ WG + G G G +P +
Sbjct: 2 AAGYSHSLALHTDGTVWAWG----------SNSSGQLGDGTTTPRGSPVQVPGLTDVVAL 51
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLN-PGV-KITKVAAGGRHTLIL 227
+ R + N + T +P L ++ PG+ + ++AG +TL L
Sbjct: 52 SAGNHHCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTDVVALSAGSSYTLAL 111
Query: 228 SDMGQVWGWGYGGEGQLGLGS---RIKMVPTPHLIPCLEHAASGKDRPLLVR-QGSV--- 280
G VW WGY GQLG G+ R+ V P L + +SG L +R G+V
Sbjct: 112 RTDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDVVA-LSSGIYHSLALRTDGTVWAW 170
Query: 281 --NSSGKAGR---------------SYVKEIACGGRHS-AVVTD 306
N+SG+ G + V ++ GG HS AV TD
Sbjct: 171 GDNASGQLGDGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTD 214
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L P + G+KI +V+ G H+L LS+ GQV+ WG +GQLGLG + +P
Sbjct: 113 INLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQK 172
Query: 259 IPCLE 263
+ LE
Sbjct: 173 VTSLE 177
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP 254
+ I V+ G H++ + G+V+ WG G EGQLG+G I ++P
Sbjct: 73 LDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMP 117
>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1264
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 35/243 (14%)
Query: 21 VVYMWGY-------LPGTSPEKSPILSP-IPARLCGGDSWKDVCGGGCGF--ALATSESG 70
++Y+WG + G P K P + P I A C G+ + S G
Sbjct: 861 IIYIWGNGKDGRLGIEGEKPFKFPQIIPNIQA-----------CQVSLGYHHSACISNQG 909
Query: 71 KLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGW 130
+++TWG + GQ +S ++ P P ++ S+V GW H ++++ G V++WG+
Sbjct: 910 QILTWGRGN-RGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGF 968
Query: 131 RECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA-GEEVVKRRKTSSAREES 189
E D+ S S Q ++ + + A S E + +
Sbjct: 969 GE--DGQLGLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHRL 1026
Query: 190 ENPASGDEFFTLSPCLVTLN-------PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
N + ++F PC+ L K + G H+ +++ G ++ G G EG
Sbjct: 1027 MNKTNQNQFL---PCITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYTSGLGNEG 1083
Query: 243 QLG 245
QLG
Sbjct: 1084 QLG 1086
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P V + I V G +HTL LS+ G+V+ WG+G +GQLGLG + +P I
Sbjct: 931 LLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQLGLGD-YQSQNSPQFIN 989
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
LE +V +I G HS+V+T
Sbjct: 990 SLEG------------------------YFVTQINAGHSHSSVIT 1010
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
P L+ KIT V+ G RH + +++ G+V+ WG+ QLGLG K P
Sbjct: 1185 PKLIESLKNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQP 1238
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIK-MVPTP 256
P ++ +V+ G H+ +S+ GQ+ WG G GQLG S ++PTP
Sbjct: 888 PNIQACQVSLGYHHSACISNQGQILTWGRGNRGQLGHSSFENCLLPTP 935
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 86/243 (35%), Gaps = 88/243 (36%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSVTE 121
L TS SGKL TWG A + GQ G E P P + A V + A + +++T
Sbjct: 482 LDTSLSGKLFTWG-AGERGQL----GHGDEEPRLVPSCVSMPAGVCQVACAHSMTIALTV 536
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G+VYT G D+G GS S GK LP
Sbjct: 537 LGQVYTMG----------AADYGQLGS--PCSVGK---LPIH------------------ 563
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGE 241
GD + C I ++A G H + LS G V+ WG G
Sbjct: 564 -----------TDGD----IRNC--------HIKQIACGSHHVVALSSNGDVYTWGKGIN 600
Query: 242 GQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHS 301
GQLG G IK TP L+ L+H VK + CG +
Sbjct: 601 GQLGHGD-IKDRHTPTLVKALKHKQ------------------------VKSVVCGSNFT 635
Query: 302 AVV 304
AV+
Sbjct: 636 AVI 638
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 115/320 (35%), Gaps = 85/320 (26%)
Query: 45 RLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP--T 102
R+ D+ CG A+ ++ G++ +WG + L G + +P + +
Sbjct: 294 RIAALDAQIIACGSK--HAVIVTKQGQIFSWG---ESSGGKLGHGADADVSQPKVIDALS 348
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWG-----------------W--RECVPSAKVTR-D 142
E++VV A G H +VT +G +YTWG W RE + + R
Sbjct: 349 ESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRIS 408
Query: 143 FGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
F S G + + Q L T D G GD T
Sbjct: 409 FVSCGPWHTAAVSSQGKLFTF----GDGTFGA-----------------LGHGDRSSTSK 447
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDM------------GQVWGWGYGGEGQLGLGSRI 250
P V G++ KV+ G HT + D G+++ WG G GQLG G
Sbjct: 448 PREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEE 507
Query: 251 -KMVPTPHLIP---CLEHAASGKDRPLLV-------------RQGS--------VNSSGK 285
++VP+ +P C A L V + GS +++ G
Sbjct: 508 PRLVPSCVSMPAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGD 567
Query: 286 AGRSYVKEIACGGRHSAVVT 305
++K+IACG H ++
Sbjct: 568 IRNCHIKQIACGSHHVVALS 587
>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
Length = 497
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
GV++ VA+G H+L+++ G++W WG +GQLG G IK + P LI L+
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLKGEVFV 196
Query: 264 HAASGKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
HAA G++ L L GSV + G+ + + ++ G + AV
Sbjct: 197 HAACGRNHTLALTENGSVYAFGE---NKMGQLGLGNKTDAV 234
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P L+ G A G HTL L++ G V+ +G GQLGLG++ VP+P I
Sbjct: 184 PKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI 240
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P V + +A G H+LIL +V+ WG+GG G+LG R +MVP
Sbjct: 319 PNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
>gi|320168750|gb|EFW45649.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 567
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 87/223 (39%), Gaps = 37/223 (16%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVV-KAAAGWAHCV 117
G ++A S++G++ TWGS G P+ E ++ + A G+AH
Sbjct: 164 GAHHSVALSDNGRVYTWGSNKQGACGIGKPGSIQRAPQRVKDKLENELIAEIACGFAHTC 223
Query: 118 SVTEAGEVYTWGWR---EC---------VPSAKVTRDFGSAGSFQKDSTGKQSALPTEQ- 164
T G++Y +G+ +C VP ++ + G+ +L
Sbjct: 224 VRTNGGDLYCFGFNRHGQCGADPSNLPIVPQPRLVSQLRR--RVASIACGRHHSLAILND 281
Query: 165 ------APPSDKRAGEEVVKRRKTSSAREESENPA---SGDEFFTLSPCL----VTLNP- 210
R G E V R + RE + NP + + + LS CL +L P
Sbjct: 282 GNVYSWGGAEGGRLGSEAVHERHQQTQRELAANPLKELATENYVPLSSCLPAVIKSLAPN 341
Query: 211 -------GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
G ++ + A G H+L L++ G V G G GQLG+
Sbjct: 342 SELIGGKGARVVRAAGGWYHSLFLTNAGMVLGTGDTSAGQLGI 384
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 23/116 (19%)
Query: 191 NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
NP+S + P + VK+T+VAAG H++ LSD G+V+ WG +G G+G
Sbjct: 135 NPSSSETATIHIPRPIPNLSAVKVTQVAAGAHHSVALSDNGRVYTWGSNKQGACGIG--- 191
Query: 251 KMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+P +++ K + EIACG H+ V T+
Sbjct: 192 --------------------KPGSIQRAPQRVKDKLENELIAEIACGFAHTCVRTN 227
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 78/216 (36%), Gaps = 81/216 (37%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
P P P + V + AAG H V++++ G VYTWG
Sbjct: 145 HIPRPIPNLSAVKVTQVAAGAHHSVALSDNGRVYTWG----------------------- 181
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+ KQ A + P S +RA + V +++ EN
Sbjct: 182 -SNKQGACGIGK-PGSIQRAPQRV---------KDKLENEL------------------- 211
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAASGKDR 271
I ++A G HT + ++ G ++ +G+ GQ G S + +VP P L+ L
Sbjct: 212 -IAEIACGFAHTCVRTNGGDLYCFGFNRHGQCGADPSNLPIVPQPRLVSQL--------- 261
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHS-AVVTD 306
R V IACG HS A++ D
Sbjct: 262 ----------------RRRVASIACGRHHSLAILND 281
>gi|400597595|gb|EJP65325.1| GDP/GTP exchange factor [Beauveria bassiana ARSEF 2860]
Length = 555
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 53/153 (34%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P LPT ++ AAG H +++ G V WG C G+
Sbjct: 286 PMLLPTLKNITSLAAGSNHILALDTKGNVLAWG---C---------------------GQ 321
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
Q+ L G +++R K SS L+P + L P KI+K
Sbjct: 322 QNQL------------GRRIIERNKMSS----------------LTPQGMGL-PRGKISK 352
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+A GG H+ L G++WGWG G++G+ S
Sbjct: 353 IACGGYHSFALDKNGKLWGWGLNNFGEIGVQSN 385
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 87/227 (38%), Gaps = 59/227 (25%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V++ A G H ++T ++ TWG + + RD G KD G +S +
Sbjct: 162 VIQIACGGMHVAALTHDHKILTWGVND---QGALGRDTTWDGGL-KDMDGNESDSDDDDD 217
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTL 225
T ES A G+EFF PG K ++ A T
Sbjct: 218 ---------------DTGINPSESTPTAVGEEFFA---------PGTKFVQIVASDSATF 253
Query: 226 ILSDMGQVWGWG--YGGEGQLGLGSRIKMVPTPHLIPCLEHA---ASGKDRPL------- 273
+L+ G+V+GWG +G LG IK+ P L+P L++ A+G + L
Sbjct: 254 VLTQDGRVYGWGTFRSSDGVLGFTESIKIQLRPMLLPTLKNITSLAAGSNHILALDTKGN 313
Query: 274 ---------------LVRQGSVNSSGKAG----RSYVKEIACGGRHS 301
++ + ++S G R + +IACGG HS
Sbjct: 314 VLAWGCGQQNQLGRRIIERNKMSSLTPQGMGLPRGKISKIACGGYHS 360
>gi|301114661|ref|XP_002999100.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262111194|gb|EEY69246.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 625
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 69/182 (37%), Gaps = 25/182 (13%)
Query: 76 GSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG------ 129
G DDE S P + V +AG H + +TE VY +G
Sbjct: 274 GHGDDESSS---------VPRVLKIFNSQRVTGVSAGLHHVLVLTEMDGVYAFGDGSSGK 324
Query: 130 --WRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAR 186
+ P TR G + S G + ++ T +++ + + +A+
Sbjct: 325 LGLGDTFPRLSPTRITSLDGFNVVHVSAGDEHSIVTTGESFFNRQVYSWGLGKHALLTAK 384
Query: 187 EESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ---VWGWGYGGEGQ 243
N DE L+P V G K+ V AGG H L S+M Q VW WG G GQ
Sbjct: 385 LACHN----DELTRLNPTRVNFFRGRKVINVVAGGAHNLATSEMPQGVCVWSWGCGSYGQ 440
Query: 244 LG 245
LG
Sbjct: 441 LG 442
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
GD+ + P ++ + ++T V+AG H L+L++M V+ +G G G+LGLG ++
Sbjct: 276 GDDESSSVPRVLKIFNSQRVTGVSAGLHHVLVLTEMDGVYAFGDGSSGKLGLGDTFPRLS 335
Query: 254 PT 255
PT
Sbjct: 336 PT 337
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 31/137 (22%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY--------------- 290
IP + AA G L G+ NSSG+ +GR+
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKN 235
Query: 291 --VKEIACGGRHSAVVT 305
V I+CG H+AV+T
Sbjct: 236 LGVVYISCGDAHTAVLT 252
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 75 LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTL 125
>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
Length = 526
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 18/150 (12%)
Query: 22 VYMWGY----LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGS 77
V+ WG G + +P + P R+ +D+ GG F +A G +I+WG
Sbjct: 357 VHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRVRDLAAGG-NFNVAVGADGSMISWG- 414
Query: 78 ADDEGQSYL--TSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
A+ G+ L ++ K G+ P P AS A+AGW H + + G ++TWGW V
Sbjct: 415 ANGNGELGLGNSNDKRGDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWGWSGSVG 474
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
V DSTG Q L Q+
Sbjct: 475 QHGV----------DADSTGGQLGLRNGQS 494
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 68/191 (35%), Gaps = 40/191 (20%)
Query: 100 LPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA 159
+P VV A+AG +H VT G VYT G E G G G
Sbjct: 153 IPQGLDVVSASAGGSHTAVVTADGAVYTCGLNE----------HGQLG--HSHDAGYVPI 200
Query: 160 LPTEQAPPSDKRAGEEVVKRRKTSSAREESE------NPASGDEFFTLSPCLVTL----- 208
L P R T E E N AS + +P +V L
Sbjct: 201 LRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGSGAPSVVPLPAWIS 260
Query: 209 --NPGV-----KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS----------RIK 251
+PG + VAAG RH L ++D G V+ WG G EG LG G+ R
Sbjct: 261 SASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWRWGFWGRDT 320
Query: 252 MVPTPHLIPCL 262
P P L+ L
Sbjct: 321 TEPAPRLVRSL 331
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 87/227 (38%), Gaps = 44/227 (19%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLP------------TEASVVKAAA 111
+ +E G+L WG +D Q L SG P PLP +V+ AA
Sbjct: 224 VCVTEGGELWAWGR-NDASQCGLGSG----APSVVPLPAWISSASPGAPGNHGAVMSVAA 278
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H ++VT+ G VYTWG + G+ S++ G+ + P + S
Sbjct: 279 GPRHNLAVTDRGAVYTWG-----DGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLAD 333
Query: 172 AGEEV------------VKRRKTSSAREESENP-----ASGDEFFTLSPCLVTLNPGV-K 213
G EV V R A + A FT P V P + +
Sbjct: 334 DGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGVGAKNAPAFTTEPTRV---PALGR 390
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLI 259
+ +AAGG + + G + WG G G+LGLG S K P L+
Sbjct: 391 VRDLAAGGNFNVAVGADGSMISWGANGNGELGLGNSNDKRGDVPRLV 437
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
++ V+AG HT+ +++ G++W WG Q GLGS P ++P P
Sbjct: 212 RVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGS-----GAPSVVPL----------P 256
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ S + G G V +A G RH+ VTD
Sbjct: 257 AWISSASPGAPGNHG--AVMSVAAGPRHNLAVTD 288
>gi|255567172|ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
gi|223536120|gb|EEF37775.1| cell cycle regulatory protein, putative [Ricinus communis]
Length = 441
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 21/182 (11%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
A + G L WG + GQ L G P + K + GW H ++++E G
Sbjct: 136 AIANDGSLWVWGKSK-RGQLGLGKGITEAFVPSKIEALAGTKIAKVSFGWGHALALSEEG 194
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
+++ WG+ ++ + G+ DS Q Q P A E +V
Sbjct: 195 KLFGWGYS---ADGRLGKIMGALEVSALDSNANQ------QVPKLMLEASERLV----LE 241
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+E++ P D PCLV G K+ +A G H+L+L G + G GQ
Sbjct: 242 GMEKENDMPILWD------PCLVEELHGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQ 295
Query: 244 LG 245
LG
Sbjct: 296 LG 297
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 93/244 (38%), Gaps = 26/244 (10%)
Query: 10 ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSES 69
+ + + V+ WG K + +PA++ G + V G +LA
Sbjct: 257 HHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLLVPAQVQGLSAVVAVAAGDT-HSLAVGSD 315
Query: 70 GKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG 129
G + GS ++ GQ G T P+P + VV AA H ++V G V+ WG
Sbjct: 316 GTVWAVGS-NNNGQL----GDGTTTYRLVPVPVLSGVVSVAANDYHSLAVRSDGTVWAWG 370
Query: 130 WRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSA 185
+ S G D T +P + + S+ + G + R SA
Sbjct: 371 -------------YNSTGQL-GDGTTTTRLVPVQVSGLSEVVSVVAGGYHSLAVRSDGSA 416
Query: 186 REESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
+ N GD T P V + + VA+G H+L L G VW WGY GQ
Sbjct: 417 WDWGSNAYGQLGDGSTTYLPVPVRVQQLSGVGAVASGSSHSLALRSDGTVWTWGYNSFGQ 476
Query: 244 LGLG 247
LG G
Sbjct: 477 LGNG 480
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 102/275 (37%), Gaps = 49/275 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G +LA G WGS + GQ L G PEP + + VV AAG AH ++
Sbjct: 156 GDNHSLAVRSDGSAWAWGS-NASGQ--LGEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLA 212
Query: 119 VTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA----GE 174
V G V+ WG A + G D T +P + S A
Sbjct: 213 VRSDGTVWAWG-------ANASGQLG-------DGTTTDRLVPVQVQGLSGVVAVAAGHH 258
Query: 175 EVVKRRKTSSA----REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
+ R + R +S G + + L+ + VAAG H+L +
Sbjct: 259 HSLAVRNDGTVWGWGRNDSNQLGKGSMRLLVPAQVQGLS---AVVAVAAGDTHSLAVGSD 315
Query: 231 GQVWGWGYGGEGQLGLGSRI-KMVPTPHLIPCLEHAASGKDRPLLVRQGSV-----NSSG 284
G VW G GQLG G+ ++VP P L + AA+ + G+V NS+G
Sbjct: 316 GTVWAVGSNNNGQLGDGTTTYRLVPVPVLSGVVSVAANDYHSLAVRSDGTVWAWGYNSTG 375
Query: 285 K---------------AGRSYVKEIACGGRHSAVV 304
+ +G S V + GG HS V
Sbjct: 376 QLGDGTTTTRLVPVQVSGLSEVVSVVAGGYHSLAV 410
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 112/312 (35%), Gaps = 69/312 (22%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHC 116
G +LA G + WG A+ GQ L G +P P P+ + + VV AG +H
Sbjct: 4 GSSHSLALRSDGTVWAWG-ANSSGQ--LGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHS 60
Query: 117 VSVTEAGEVYTWGWR---ECVPSAKVTRD------------------------------- 142
++V G V+ WG + ++R
Sbjct: 61 LAVRSDGTVWAWGSNASGQLGDETTISRSTPVQVLGLSGVLFVAAGSSHVLALRYDGTVW 120
Query: 143 -FGSAGSFQK-DSTGKQSALPTEQAPPSDKRA----GEEVVKRRKTSSAREESENPAS-- 194
+GS S Q+ D T ALP + S A + R SA N +
Sbjct: 121 AWGSNSSGQRGDGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDGSAWAWGSNASGQL 180
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMV 253
G+ + P V + + VAAG H+L + G VW WG GQLG G+ ++V
Sbjct: 181 GEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLV 240
Query: 254 PTP-HLIPCLEHAASGKDRPLLVRQ-GSV--------NSSGKA-----------GRSYVK 292
P + + A+G L VR G+V N GK G S V
Sbjct: 241 PVQVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLLVPAQVQGLSAVV 300
Query: 293 EIACGGRHSAVV 304
+A G HS V
Sbjct: 301 AVAAGDTHSLAV 312
>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 992
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVPTPHLIPCLEHAAS--- 267
+ + +++AGG H+ +LS G V+GWG GQLGLG ++ + VPT C + S
Sbjct: 168 IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISC 227
Query: 268 -GKDRPLLVRQGSVNSSGKAG----------------------RSYVKEIACGGRHSAVV 304
G+ L + G+V + G G S V ++ CG H+ V
Sbjct: 228 GGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVF 287
Query: 305 TDMS 308
+ S
Sbjct: 288 EESS 291
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 28/121 (23%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP-HL-----IPCLEHAA 266
++ ++A G +H++ LS+ GQ++ WG GQLGL +P HL IP + +A
Sbjct: 116 QVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 175
Query: 267 SGKDRPLLVRQGSV-----NSSGKAGRSYVKE-----------------IACGGRHSAVV 304
G +L G V NS+G+ G K+ I+CGG H+A +
Sbjct: 176 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATL 235
Query: 305 T 305
+
Sbjct: 236 S 236
Score = 40.8 bits (94), Expect = 0.70, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 28/166 (16%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE-- 163
V++ A G H ++++ G+++ WG G G +K+ G QS +
Sbjct: 117 VIQIACGDQHSMALSNDGQLFVWG----------ENTHGQLG-LRKEQAGTQSPQHLQSL 165
Query: 164 -QAPPSDKRAG---------EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK 213
+ P + AG VV ++SA + GD P +V G K
Sbjct: 166 CEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQL----GLGDTKDRFVPTIVKSLCGKK 221
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++ GG HT LS G V+ +G GG GQLG S +K P LI
Sbjct: 222 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNS-LKDEHHPRLI 266
>gi|261404982|ref|YP_003241223.1| S-layer domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261281445|gb|ACX63416.1| S-layer domain protein [Paenibacillus sp. Y412MC10]
Length = 1074
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 74/212 (34%), Gaps = 56/212 (26%)
Query: 59 GCGFALATSESGKLITWGSADDEGQ--SYLTSGKHGETPEPFPLPTEAS----VVKAAAG 112
G + LA E G L++WG + GQ S G + P+P VV +AG
Sbjct: 270 GNDYTLALKEDGTLLSWG-VNGYGQLGSDTLQGTYSNYPKPVLDKASGDAFGHVVDISAG 328
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
AH ++ E G V+TWG S +T G ++ G+ + LP
Sbjct: 329 IAHVAAIREDGSVWTWGGNTIWGSGDITGQLGRGDDRLEERPGRVTRLPGN--------- 379
Query: 173 GEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQ 232
K+ + GG HT+I+ D G
Sbjct: 380 ---------------------------------------AKVLQAETGGHHTVIMLDNGT 400
Query: 233 VWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
+W G E QLG G ++ P+ + L H
Sbjct: 401 LWSMGSNREKQLGGGYKMDSAIEPNQL-SLSH 431
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET-----PEPF------PLPTEASVVKAAAG 112
LA ++G +++WGS + GQ L +GK G +P L A++V A
Sbjct: 49 LALLDNGTVLSWGS-NMVGQ--LGNGKQGSNFSTSFAQPVYEKVNGELKVLANIVAVEAS 105
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ ++++ G VY WG S K+ R F G++ +A+P PP ++ +
Sbjct: 106 LQYSLALSADGTVYGWGLNA---SNKLGRPF--EGTYYY-----PTAIPIAGLPPIEQIS 155
Query: 173 G----EEVVKRRKTSSAREESENPASGDEF-----FTLSPCLVTLNPG---VKITKVAAG 220
+ + T A ++++ A G+ + P V N I ++ AG
Sbjct: 156 AGVTHAAALAKDGTVWAWGDNQSGAVGNGNNGPLEYVERPVQVKKNASEFLTGIKQIHAG 215
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLG-LGSRIKMVPTPHL------IPCLEHAASGKDRPL 273
T+ +++ G++ GWGY G QLG L + + P L + ++ ++G D L
Sbjct: 216 NWFTMAVTENGELLGWGYNGTYQLGDLTTNSRSYPVHALDKNKNPLNGIKKVSTGNDYTL 275
Query: 274 LVRQ 277
+++
Sbjct: 276 ALKE 279
>gi|348531990|ref|XP_003453490.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
homolog [Oreochromis niloticus]
Length = 451
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 82/211 (38%), Gaps = 41/211 (19%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGW---------RECVPSAKVTRDFGSAG-SFQKDSTG 155
V++ A G H + +TE G+V+ GW + S+ V AG Q+ ST
Sbjct: 219 VIQVACGQDHSLFLTETGKVFACGWGADGQTGLGHHNISSSPVEVGGDLAGVEVQQISTY 278
Query: 156 KQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKIT 215
+L + E + + A + + SP + L K+
Sbjct: 279 GDCSLAVSKDGQLYGWGNSEYRQLALVTQATQMN------------SPRHLPLKGCGKVV 326
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
+ A GG IL+D G+V+ WGY G LG G ++ TP +IP P L
Sbjct: 327 QAACGGTQVAILNDKGEVFVWGY---GILGKGPKLSESSTPEMIP-----------PTLF 372
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ N SG R I CG H A VTD
Sbjct: 373 GRSEFNPSGVVSR-----IRCGLSHFAAVTD 398
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 70/187 (37%), Gaps = 50/187 (26%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA S+ G+L WG+++ + +T +P PL VV+AA G + +
Sbjct: 282 SLAVSKDGQLYGWGNSEYRQLALVTQATQMNSPRHLPLKGCGKVVQAACGGTQVAILNDK 341
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKT 182
GEV+ WG+ G K +S+ P E PP T
Sbjct: 342 GEVFVWGY----------------GILGKGPKLSESSTP-EMIPP--------------T 370
Query: 183 SSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEG 242
R E NP ++++ G H ++D G+++ WG G
Sbjct: 371 LFGRSE-------------------FNPSGVVSRIRCGLSHFAAVTDRGELFVWGKNVRG 411
Query: 243 QLGLGSR 249
LG+G +
Sbjct: 412 CLGIGKK 418
>gi|332018112|gb|EGI58726.1| RCC1 domain-containing protein 1 [Acromyrmex echinatior]
Length = 345
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L+ G+K+ +++AGG HT +++D G ++ WG+ G+LG+ ++ K V + +P
Sbjct: 201 NPKLIEALAGLKVVQISAGGWHTAVVTDQGDLYTWGWNSNGELGIENKDKKV---YAVPT 257
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L N G+ VK++ CG + +TD
Sbjct: 258 LIDFK--------------NDRGENIEINVKKVECGNSFTICLTD 288
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 79/217 (36%), Gaps = 58/217 (26%)
Query: 35 KSPILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHG 92
+P+L IP R+ D CGF + +E+G + + G GQ ++
Sbjct: 148 NAPLLVEIPKRVKFVDL-------TCGFDHTILLAENGDVYSMGMGI-RGQLGHNELENC 199
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+ P+ VV+ +AG H VT+ G++YTWGW G G KD
Sbjct: 200 DNPKLIEALAGLKVVQISAGGWHTAVVTDQGDLYTWGWNSN----------GELGIENKD 249
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
K A+PT +D+ GE N +
Sbjct: 250 K--KVYAVPTLIDFKNDR--GE----------------------------------NIEI 271
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
+ KV G T+ L+D G WG G GQLG R
Sbjct: 272 NVKKVECGNSFTICLTDDGFFWGCGTNKYGQLGKLQR 308
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV + VK + G HT++L++ G V+ G G GQLG + ++ P LI
Sbjct: 149 APLLVEIPKRVKFVDLTCGFDHTILLAENGDVYSMGMGIRGQLG-HNELENCDNPKLIEA 207
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L AG V +I+ GG H+AVVTD
Sbjct: 208 L-----------------------AGLKVV-QISAGGWHTAVVTD 228
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 31/137 (22%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY--------------- 290
IP + AA G L G+ NSSG+ +GR+
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKN 235
Query: 291 --VKEIACGGRHSAVVT 305
V I+CG H+AV+T
Sbjct: 236 LGVVYISCGDAHTAVLT 252
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 75 LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTL 125
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+P V +N IT V GG H++ L +G+VW WGY G+G+LG G+
Sbjct: 197 TPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGT 243
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 72/184 (39%), Gaps = 13/184 (7%)
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQA 165
++ +AG + ++++ G V TWG A G+ + Q K S+LP +
Sbjct: 262 IIAISAGGEYSIALSSDGSVLTWG-------ANSDGQLGNGNTDQNSVPTKISSLPLMKG 314
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCL--VTLNPGVKITKVAAGGRH 223
+ + V + + E E +P L V + I V AG
Sbjct: 315 ISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDIDAVCAGATF 374
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---AASGKDRPLLVRQGSV 280
+L L G+VW WG EGQLG G+ TP + L A G D L +R G V
Sbjct: 375 SLALGIDGRVWAWGLNDEGQLGDGTNTNST-TPVEVTNLAKISAVACGSDHSLAIRNGKV 433
Query: 281 NSSG 284
S G
Sbjct: 434 KSWG 437
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
PGV +++ G H+L L G++W WG +GQLG G+
Sbjct: 153 PGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTN 192
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG-KHGETPEPFPLPTE--ASVVKAAAGWAH 115
G +LA +E G + WG +DEGQ + +G K + P P+ + + AG
Sbjct: 318 GEAHSLAVTEDGFVYAWG-LNDEGQ--IGNGEKSADNPVLNPVQVQGLTDIDAVCAGATF 374
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---QAPPSDKRA 172
+++ G V+ WG D G G D T S P E A S
Sbjct: 375 SLALGIDGRVWAWGLN----------DEGQLG----DGTNTNSTTPVEVTNLAKISAVAC 420
Query: 173 GEE---VVKRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLIL 227
G + ++ K S + G + +P VT G+ I VAAG H+L +
Sbjct: 421 GSDHSLAIRNGKVKSWGLNDEGQLGDGSTRSSSAPLDVT---GLSDIVYVAAGESHSLAI 477
Query: 228 SDMGQVWGWGYGGEGQLGLGSR 249
+ G ++ WG G+GQLG G+
Sbjct: 478 TSKGNIYVWGLNGDGQLGDGTN 499
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 112/297 (37%), Gaps = 50/297 (16%)
Query: 11 NEKMEECKETVVYMWGYLP----GTSPEKSPILSPIPARLCGGDSWKDVCG-----GGCG 61
N + + V+ WG G +PE + P+P R+ +DV G G
Sbjct: 208 NHSLAVRSDGSVWAWGNNASGQLGGAPEAA---YPVPWRV------EDVSGVVAVAAGQY 258
Query: 62 FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP--LPTEASVVKAAAGWAHCVSV 119
+LA G + WG D L GK P +P VV +AG+ H + V
Sbjct: 259 HSLAVRYDGTVWAWG---DNLYGQLGDGKLEGNSRWLPKQVPGLGGVVAVSAGFYHSLVV 315
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA------G 173
G V+ WG +G G + +A P + S A
Sbjct: 316 RSDGTVWAWG----------NNAYGQLGGGSR----AHAASPVQVLGVSGAVAVAAGYRH 361
Query: 174 EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQ 232
VV T A + + GD T P + PG+ + VAAGG H L L G
Sbjct: 362 SLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRV-PGLSGVVSVAAGGGHVLALLSDGT 420
Query: 233 VWGWGYGGEGQLGLGSR-IKMVP--TPHLIPCLEHAASGKDRPLLVR-QGSVNSSGK 285
VW WG GQLG G+R + VP P L + AA G L VR GSV S G
Sbjct: 421 VWAWGDNASGQLGDGTRHSRWVPRQVPELSGVVAVAA-GSSFSLAVRYDGSVWSWGD 476
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 107/269 (39%), Gaps = 48/269 (17%)
Query: 42 IPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP-FPL 100
+P ++ G V GG +LA G + WG+ SG+ G PE +P+
Sbjct: 190 VPVQVTGLSGVVSVAAGGN-HSLAVRSDGSVWAWGNN--------ASGQLGGAPEAAYPV 240
Query: 101 PTE----ASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P + VV AAG H ++V G V+ WG +G G + + G
Sbjct: 241 PWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWG----------DNLYGQLGDGKLE--GN 288
Query: 157 QSALPTEQAP-------PSDKRAGEEVVKRRKTSSAREESE--NPASGDEFFTLSPCLVT 207
LP +Q P S VV+ T A + G SP V
Sbjct: 289 SRWLP-KQVPGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVL 347
Query: 208 LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH--- 264
G VAAG RH+L+++ G +W WG +GQ G G+ + PTP +P L
Sbjct: 348 GVSGA--VAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRY-PTPGRVPGLSGVVS 404
Query: 265 -AASGKDRPLLVRQGSV-----NSSGKAG 287
AA G L+ G+V N+SG+ G
Sbjct: 405 VAAGGGHVLALLSDGTVWAWGDNASGQLG 433
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 96/260 (36%), Gaps = 70/260 (26%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G + WG + GQ L G + P + + VV AAG H ++V
Sbjct: 160 SLAVRSDGSVWAWGR-NTSGQ--LGDGTRDDRAVPVQVTGLSGVVSVAAGGNHSLAVRSD 216
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV------ 176
G V+ WG +++G+ P E A P R E+V
Sbjct: 217 GSVWAWG---------------------NNASGQLGGAP-EAAYPVPWRV-EDVSGVVAV 253
Query: 177 -VKRRKTSSAREESENPASGDEFFTL---------SPCLVTLNPGVK-ITKVAAGGRHTL 225
+ + + R + A GD + S L PG+ + V+AG H+L
Sbjct: 254 AAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPKQVPGLGGVVAVSAGFYHSL 313
Query: 226 ILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGK 285
++ G VW WG GQLG GSR HAAS P+ V
Sbjct: 314 VVRSDGTVWAWGNNAYGQLGGGSR-------------AHAAS----PVQV---------- 346
Query: 286 AGRSYVKEIACGGRHSAVVT 305
G S +A G RHS VV
Sbjct: 347 LGVSGAVAVAAGYRHSLVVN 366
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 95/280 (33%), Gaps = 76/280 (27%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P + P LS + A G F+LA G + +WG D L G
Sbjct: 443 PRQVPELSGVVA-----------VAAGSSFSLAVRYDGSVWSWG---DNAYGQLGHGSTD 488
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWREC------------------- 133
+ P + + VV AAG H ++V G V+ WG+ +
Sbjct: 489 ASSVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQ 548
Query: 134 VPS----AKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR--------- 180
VP V DFG + + + D T +D G+ RR
Sbjct: 549 VPGLSGMVSVAADFGHSLAVRADGT------VWAWGNNTDSELGDGTTTRRLVPLRVNAP 602
Query: 181 -----------KTSSAREESENPASGDEF--------FTLSPCLVTLNPGVKITKVAAGG 221
+ + R + A G F T V + V+ + +AAG
Sbjct: 603 GTVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVRASTLAAGQ 662
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
H++ + G +W WG+ EGQLG G+ T H +P
Sbjct: 663 SHSMAVGSDGFLWAWGFNFEGQLGDGTL-----THHALPV 697
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 68/189 (35%), Gaps = 19/189 (10%)
Query: 63 ALATSESGKLITWGSADD--EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVT 120
+L + G L WGS D G LT P P +P + VV AAG H +++
Sbjct: 362 SLVVNSDGTLWAWGSNLDGQRGDGTLT-----RYPTPGRVPGLSGVVSVAAGGGHVLALL 416
Query: 121 EAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
G V+ WG G G + S +P + + R
Sbjct: 417 SDGTVWAWG----------DNASGQLGDGTRHSRWVPRQVPELSGVVAVAAGSSFSLAVR 466
Query: 181 KTSSAREESENPAS--GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGY 238
S +N G S + + ++ VAAG H L + G VWGWG+
Sbjct: 467 YDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGF 526
Query: 239 GGEGQLGLG 247
GQLG G
Sbjct: 527 NDYGQLGDG 535
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 72/199 (36%), Gaps = 12/199 (6%)
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
G L G P + + V AAG H +++ G V+ WG T
Sbjct: 75 NGHGQLGDGTTLSRRTPVQVQGLSGVAAVAAGHGHSLALRYDGTVWAWGNNAYGQLGDDT 134
Query: 141 RDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFT 200
RD + +G S + + + + G R TS + G
Sbjct: 135 RDNRTVPVQVTGLSGVVSVVAGDTHSLAVRSDGSVWAWGRNTSGQLGD------GTRDDR 188
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
P VT GV VAAGG H+L + G VW WG GQLG G+ P P +
Sbjct: 189 AVPVQVTGLSGV--VSVAAGGNHSLAVRSDGSVWAWGNNASGQLG-GAPEAAYPVPWRVE 245
Query: 261 CLE---HAASGKDRPLLVR 276
+ A+G+ L VR
Sbjct: 246 DVSGVVAVAAGQYHSLAVR 264
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 100/246 (40%), Gaps = 34/246 (13%)
Query: 22 VYMWG-YLPGTSPEKSPILSPIPARLCGGDSWKDVCG--GGCGFALATSESGKLITWGSA 78
V+ WG G + + + + PA++ G DV G G G + G + TWG+
Sbjct: 769 VWAWGDNTYGQLGDGTTLATRSPAQVSG---LTDVEGLAAGEGHVVVVKMDGTVWTWGN- 824
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L G P +P VV AAG+AH +++ G V WGW E +
Sbjct: 825 NAKGQ--LGDGTTTRRLVPTQVPGLTGVVAVAAGYAHSLALKADGTV--WGWGENI---- 876
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTE----QAPPSDKRAGEEVVKRRKTSSAREESENPAS 194
+G G D T Q PT+ S + R+ + N
Sbjct: 877 ----YGQLG----DGTTTQRVAPTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNAHG 928
Query: 195 ----GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SR 249
G L+P LV GV ++A +H+L L G VW WGY GQLG G +
Sbjct: 929 QLGIGTTTTRLAPTLVPSLSGV--VSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTT 986
Query: 250 IKMVPT 255
+ VPT
Sbjct: 987 TRHVPT 992
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 42 IPARLCGGDSWK-DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPL 100
+P R G W G G +LA G + TWG ++ GQ L G P +
Sbjct: 90 VPVRAWG--LWNISAVGAGDLHSLAMKSDGTVWTWG-GNNFGQ--LGDGTTTGRQAPVQV 144
Query: 101 PTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSAL 160
P VV+ AAG++H +++ G V+ WG S R G + Q+ + L
Sbjct: 145 PGLGEVVRVAAGFSHSLALKTDGTVWAWG------SNGAGR-LGDGTTTQRLMPVQVQGL 197
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTLSPCLVTLNPGV-KITKV 217
PT +A + A + A + N GD + + P LV PG+ T +
Sbjct: 198 PTIKAIAAGN-AHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALV---PGLTNATGL 253
Query: 218 AAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
+AG H+L+ G W WG GQLG G+
Sbjct: 254 SAGSNHSLVRQADGTTWVWGANTYGQLGDGT 284
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 76/201 (37%), Gaps = 26/201 (12%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+LA G + WG D L +G + P +P VV AAG H ++V
Sbjct: 461 SLALKADGTVWAWG---DNANGQLGNGSTTDRSNPTQVPGLTGVVSIAAGPGHALAVKAD 517
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAP----PSDKRAG---EE 175
G ++TWG + G G D T +PT Q P AG
Sbjct: 518 GTLWTWG----------DNNTGQLG----DGTTVDRPIPT-QVPGVTGVVSVAAGLYHSL 562
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
VVK T A + G T+ P + + AG H+L L G VW
Sbjct: 563 VVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNLTGVVAITAGLYHSLALKTDGTVWA 622
Query: 236 WGYGGEGQLGLG-SRIKMVPT 255
WGY GQLG G + + VPT
Sbjct: 623 WGYNLHGQLGNGNTTTQQVPT 643
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 82/207 (39%), Gaps = 15/207 (7%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWA-HCVSVTE 121
+L G + TWGS + GQ L G + P + + VV AAG H V+V
Sbjct: 310 SLVLKSDGTVWTWGS-NQRGQ--LGDGTQEQRLVPVQVMGLSGVVAVAAGSGQHSVAVMA 366
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
GEV+TWG V G GS + K+S E+ + R K
Sbjct: 367 NGEVWTWG-------HNVEGQLGE-GSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDG 418
Query: 182 TSSAREESENPASGDEFFTLSPCLVTLNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGG 240
T A ++ GD T L T PG+ + VAAG +L L G VW WG
Sbjct: 419 TVWAWGDNAKGQLGDGT-TAQRLLPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNA 477
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAAS 267
GQLG GS P +P L S
Sbjct: 478 NGQLGNGSTTDR-SNPTQVPGLTGVVS 503
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 95/247 (38%), Gaps = 24/247 (9%)
Query: 22 VYMWGY-LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADD 80
V+ WG+ + G E S S +P R V G LA+ G + WG D
Sbjct: 370 VWTWGHNVEGQLGEGSSSYSAVPKRSHALVERTSVAAGRY-HGLASKPDGTVWAWG---D 425
Query: 81 EGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVT 140
+ L G + P +P ++V AAG +++ G V+ WG
Sbjct: 426 NAKGQLGDGTTAQRLLPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWG-------DNAN 478
Query: 141 RDFGSAGSFQKDSTGKQ----SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGD 196
G+ GS S Q + + + A P A VK T ++ GD
Sbjct: 479 GQLGN-GSTTDRSNPTQVPGLTGVVSIAAGPGHALA----VKADGTLWTWGDNNTGQLGD 533
Query: 197 EFFTLSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
P + T PGV + VAAG H+L++ G VW WG EGQLG G + P
Sbjct: 534 GTTVDRP-IPTQVPGVTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLG-GGTTTIRPV 591
Query: 256 PHLIPCL 262
P P L
Sbjct: 592 PSQTPNL 598
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 210 PGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPTP-HLIPCLEHAA 266
PG+ ++ +VAAG H+L L G VW WG G G+LG G+ +++P +P ++ A
Sbjct: 145 PGLGEVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAIA 204
Query: 267 SGKDRPL 273
+G L
Sbjct: 205 AGNAHSL 211
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 31/137 (22%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL- 258
+ +P +T G+KI +V+ G H+L LS QV+ WG GQLGLG +P
Sbjct: 116 SFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV 175
Query: 259 -----IPCLEHAASGKDRPLLVRQGS-----VNSSGK---AGRSY--------------- 290
IP + AA G L G+ NSSG+ +GR+
Sbjct: 176 RSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKN 235
Query: 291 --VKEIACGGRHSAVVT 305
V I+CG H+AV+T
Sbjct: 236 LGVVYISCGDAHTAVLT 252
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ + V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 75 LTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTL 125
>gi|118348324|ref|XP_001007637.1| myosin like protein [Tetrahymena thermophila]
gi|89289404|gb|EAR87392.1| myosin like protein [Tetrahymena thermophila SB210]
Length = 1941
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 183 SSAREESENPASGDEFFTLSPCLVTL--NPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
SS + S GD F SP L++ G KI +V+ G +HT+ L+ +G+++ WG
Sbjct: 1726 SSGQNTSGELGHGDRLFRKSPQLISSFKKFGEKIKQVSCGLKHTICLTALGKIFSWGNNR 1785
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQG 278
GQLG+G K P LI + + L VR G
Sbjct: 1786 FGQLGVGD-TKYRSNPQLIFVKSKSIDSINSFLQVRAG 1822
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 119/293 (40%), Gaps = 59/293 (20%)
Query: 43 PARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT 102
P ++ G + + G +LA ++SG + ++G+ G S L G + P + +
Sbjct: 121 PKKIEGLSDIQAIAAGDF-HSLALTKSGDVYSFGN----GTSGLGHGNTEDQSTPKKIES 175
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
+ V AAG H +++T++G+VY++G+ FG G DS + P
Sbjct: 176 LSDVQAIAAGGNHSLALTKSGDVYSFGFGL----------FGRLGHGDTDSQLE----PK 221
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPG 211
+ SD +A + S A +S + S GD L+P +
Sbjct: 222 KIEDLSDIQA---IAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPK--KIEDL 276
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASG 268
I VAAG H+L L+ G+V+ +G G GQLG G + TP I L + A+G
Sbjct: 277 SDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQL-TPKKIEGLKDIQAIAAG 335
Query: 269 KDRPL-LVRQGSVNSSGKA-------------------GRSYVKEIACGGRHS 301
L L + G V S G G + ++ IA G HS
Sbjct: 336 DFHSLALTKSGDVYSFGNGTSGLGHGDTANQLEPKKIEGLTDIQAIAAGANHS 388
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 49/280 (17%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGK--HGETP---EPFPLPTEASVVKAA 110
G +LA ++SG + ++G + G+ HG T EP + + + A
Sbjct: 83 IAAGTNHSLALTKSGDVYSFG--------FGLFGRLGHGNTDSQLEPKKIEGLSDIQAIA 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
AG H +++T++G+VY++G T G + + + K +L QA +
Sbjct: 135 AGDFHSLALTKSGDVYSFG--------NGTSGLGHGNTEDQSTPKKIESLSDVQAIAAGG 186
Query: 171 RAGEEVVKRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ K S GD L P + I +AAGG H+L L+
Sbjct: 187 NHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPK--KIEDLSDIQAIAAGGNHSLALTK 244
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL---EHAASGKDRPL-LVRQGSVNSSGK 285
G V+ +G+G GQLG G + TP I L + A+G + L L + G V S G+
Sbjct: 245 SGDVYSFGWGLHGQLGHGDTENQL-TPKKIEDLSDIQAVAAGANHSLALTKSGEVYSFGR 303
Query: 286 A--------------------GRSYVKEIACGGRHSAVVT 305
G ++ IA G HS +T
Sbjct: 304 GNTGQLGHGDTDDQLTPKKIEGLKDIQAIAAGDFHSLALT 343
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 37/224 (16%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
++P+K LS + A GG+ +LA ++SG + ++G + G+
Sbjct: 168 STPKKIESLSDVQAIAAGGN-----------HSLALTKSGDVYSFG--------FGLFGR 208
Query: 91 --HGETP---EPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGS 145
HG+T EP + + + AAG H +++T++G+VY++GW + G
Sbjct: 209 LGHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFGW-------GLHGQLGH 261
Query: 146 AGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS-AREESENPASGDEFFTLSPC 204
+ + + K L QA + + K + S R + GD L+P
Sbjct: 262 GDTENQLTPKKIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPK 321
Query: 205 LVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+ G+K I +AAG H+L L+ G V+ +G G G LG G
Sbjct: 322 KI---EGLKDIQAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHG 361
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 22/114 (19%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL--IPCLEHAASGKDR 271
I +AAG H+L L+ G V+ +G+G G+LG G+ + + + ++ A+G
Sbjct: 80 IQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQAIAAGDFH 139
Query: 272 PL-LVRQGSVNSSGKA-------------------GRSYVKEIACGGRHSAVVT 305
L L + G V S G S V+ IA GG HS +T
Sbjct: 140 SLALTKSGDVYSFGNGTSGLGHGNTEDQSTPKKIESLSDVQAIAAGGNHSLALT 193
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.131 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,574,735,394
Number of Sequences: 23463169
Number of extensions: 259614917
Number of successful extensions: 544316
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2883
Number of HSP's successfully gapped in prelim test: 1155
Number of HSP's that attempted gapping in prelim test: 504618
Number of HSP's gapped (non-prelim): 33282
length of query: 313
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 171
effective length of database: 9,027,425,369
effective search space: 1543689738099
effective search space used: 1543689738099
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)