BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021363
(313 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 55 VCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS------VVK 108
+ G ++A + +WG +D GQ HG+ E P PT+ S +V
Sbjct: 19 IISAGASHSVALLSGDIVCSWGRGED-GQL-----GHGDA-EDRPSPTQLSALDGHQIVS 71
Query: 109 AAAGWAHCVSVTEAG-EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTE---- 163
G H V+ +++G EVY+WGW DFG G +S+ + LP +
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWG----------DFGRLG--HGNSSDLFTPLPIKALHG 119
Query: 164 ----QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAA 219
Q D ++ S R ++ GD +L P + G++I VAA
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA 179
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVP 254
G HT +++ G ++GWG+G G LGLG R ++VP
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP 215
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 105/270 (38%), Gaps = 75/270 (27%)
Query: 59 GCGFALATSESG-KLITWGSADDEGQSYLTSGKHGETPEPF-PLPTEA----SVVKAAAG 112
G +A S+SG ++ +WG D HG + + F PLP +A + + A G
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGD------FGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+HC++VT GEV +WG ++ G+ TE + K
Sbjct: 129 DSHCLAVTMEGEVQSWG---------------------RNQNGQLGLGDTEDSLVPQKIQ 167
Query: 173 GEEVVKRRKTSSAREESE-----------------NPASGDEFFTLSPCLVTLNPGVKIT 215
E ++ + ++ E + N GD L P VT G K++
Sbjct: 168 AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS 227
Query: 216 KVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLV 275
VA G RHT+ +S G ++ +G+ GQLG G HLIP A S
Sbjct: 228 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDL-----EDHLIPHKLEALS-------- 274
Query: 276 RQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
S++ +I+ G RH+ +T
Sbjct: 275 ------------NSFISQISGGWRHTMALT 292
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 26/208 (12%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G L WG G L PE + A GW H +SV+ +G
Sbjct: 186 AVTEDGDLYGWGWGR-YGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+YT+GW + +G G + +P + S+ + R T +
Sbjct: 245 LYTYGWSK----------YGQLGHGDLE----DHLIPHKLEALSNSFISQISGGWRHTMA 290
Query: 185 AREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVW 234
+ + G+ SP V K+ +V+ G RHTL +++ V+
Sbjct: 291 LTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVF 350
Query: 235 GWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
WG G GQLG+G + P +I L
Sbjct: 351 AWGRGTNGQLGIGESVDR-NFPKIIEAL 377
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCV 117
GG +A + GKL WG + GQ + + +P P + VV+ + GW H +
Sbjct: 283 GGWRHTMALTSDGKLYGWG-WNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 341
Query: 118 SVTEAGEVYTWG 129
+VTE V+ WG
Sbjct: 342 AVTERNNVFAWG 353
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 60 CG--FALATSESGKLITWGSADDEGQSYLTSGKH---GETPEPFPLPTEASVVKAAAGWA 114
CG +LA S+ G+L WG + GQ L G+ TP+ + + +AG A
Sbjct: 145 CGDYHSLALSKGGELFAWGQ-NLHGQ--LGVGRKFPSTTTPQIVEHLAGVPLAQISAGEA 201
Query: 115 HCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST-----------------GKQ 157
H ++++ +G +Y+WG EC G + KD G
Sbjct: 202 HSMALSMSGNIYSWGKNEC-------GQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSH 254
Query: 158 SALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKV 217
SAL T+ AG K + ++E L PCLV G ++T++
Sbjct: 255 SALLTQDGLLFTFGAG----KHGQLGHNSTQNE----------LRPCLVAELVGYRVTQI 300
Query: 218 AAGGRHTL-ILSDMGQVWGWGYGGEGQLGL-GSRIKMVPTP 256
A G HTL +SD+G+V+ +G G +GQLG G+R +++P P
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLP 341
Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 25/106 (23%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
T +P +V GV + +++AG H++ LS G ++ WG GQLGLG
Sbjct: 179 TTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLG------------ 226
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
H S KD P L+ +G N V+ +ACGG HSA++T
Sbjct: 227 ----HTES-KDDPSLI-EGLDNQK-------VEFVACGGSHSALLT 259
Score = 40.0 bits (92), Expect = 0.020, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 78/206 (37%), Gaps = 29/206 (14%)
Query: 103 EASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
E +++ G H +++++ GE++ WG + V R F S + Q + +P
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWG-QNLHGQLGVGRKFPSTTTPQ--IVEHLAGVPL 193
Query: 163 EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
Q + + + S + E G P L+ K+ VA GG
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 223 HTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNS 282
H+ +L+ G ++ +G G GQLG S L PCL G
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNS-----TQNELRPCLVAELVG-------------- 294
Query: 283 SGKAGRSYVKEIACGGRHS-AVVTDM 307
V +IACG H+ A V+D+
Sbjct: 295 ------YRVTQIACGRWHTLAYVSDL 314
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 41/198 (20%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G AL +G++ +WG G+HG+ E P EA ++ +
Sbjct: 166 GAEHALLLDAAGQVFSWGG-----------GRHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPP 167
AAG H V V+E G++Y WGW E A TR+ G + +++TG
Sbjct: 215 VAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLN---------- 264
Query: 168 SDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLIL 227
E+ + ++T + + P + F P L+ L G KV+ G RHT ++
Sbjct: 265 ------EDGSQVKRTGRVEDGAPAPFIAVQPF---PALLDLPLGSDAVKVSCGSRHTAVV 315
Query: 228 SDMGQVWGWGYGGEGQLG 245
+ G+++ WG+G GQLG
Sbjct: 316 TRTGELYTWGWGKYGQLG 333
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L +R + +
Sbjct: 199 LEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR-NLAEDGETV- 256
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK---------------EIACGGRHSAVVT 305
E +D + R G V A V+ +++CG RH+AVVT
Sbjct: 257 AREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT 316
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 77/193 (39%), Gaps = 20/193 (10%)
Query: 86 LTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD-FG 144
L SG+ + P PL V + +A W++ VT G V +A RD +
Sbjct: 21 LGSGRGHQVHSPSPLRAGVDVCRVSASWSYTAFVTRGGRVELS--GSASGAAGGCRDAWA 78
Query: 145 SAGSFQKDSTGK-QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF--FTL 201
S G G AL AP S R GE + A EE ++P + L
Sbjct: 79 SEGLLLVLRAGPGPEALLQAWAPDSALR-GEPLWAHSVVPEAVEE-DDPGGEAQIGRLPL 136
Query: 202 SPCLVT-----------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI 250
PC L P ++ ++ G H L+L GQV+ WG G GQLG G+ +
Sbjct: 137 LPCARAYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-L 195
Query: 251 KMVPTPHLIPCLE 263
+ P L+ L+
Sbjct: 196 EAELEPRLLEALQ 208
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLE-----HAASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL+ + A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTANQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ V+ A G ++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA--AAGWAHC 116
G AL +G++ +WG GQ L G EP L +V A AAG H
Sbjct: 166 GAEHALLLDAAGQVFSWGGGR-HGQ--LGHGTLEAELEPRLLEALQGLVMAEVAAGGWHS 222
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAG-SFQKDSTGKQSALPTEQAPPSDKRAGEE 175
V V+E G++Y WGW E A TR+ G + +++T E+
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREAT----------------ELNED 266
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
+ ++T A + + P + F P L+ L G K + G RHT +++ G+++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPF---PALLDLPMGSDAVKASCGSRHTAVVTRTGELYT 323
Query: 236 WGYGGEGQLG 245
WG+G GQLG
Sbjct: 324 WGWGKYGQLG 333
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 25/105 (23%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P L P ++ ++ G H L+L GQV+ WG G GQLG G+ ++ P L+
Sbjct: 148 APFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT-LEAELEPRLLEA 206
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L QG V + E+A GG HS V++
Sbjct: 207 L--------------QGLV----------MAEVAAGGWHSVCVSE 227
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+ + +VAAGG H++ +S+ G ++ WG+ GQL L PT +L
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL-------PTRNLAE 251
Query: 261 CLEHAAS-----GKDRPLLVRQGSVNSSGKA----------------GRSYVKEIACGGR 299
E A +D + R G A G VK +CG R
Sbjct: 252 DGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSR 310
Query: 300 HSAVVT 305
H+AVVT
Sbjct: 311 HTAVVT 316
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 39/221 (17%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS---VVKAAAGW 113
G G LAT++ G++ TWG S L +G P + T S V++ A G
Sbjct: 106 GSGPHIVLATTD-GEVFTWGH---NAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGS 161
Query: 114 AHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAG 173
H + +T GEV+ WG+ ++G ST Q +P +
Sbjct: 162 YHSLVLTSDGEVFAWGYN-------------NSGQVGSGSTANQ-PIPRRVTGCLQNKVV 207
Query: 174 EEVVKRRKTSSAREESENP--------------ASGDEFFTLSPCLVTLNPGVKITKVAA 219
+ + S A ++ +SG++ +PC V G+++ +VA
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQ---PTPCRVAALQGIRVQRVAC 264
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTPHLI 259
G HTL+L+D GQ++ WG GQLG G++ PTP ++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV 305
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRS-----------------Y 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S PIP R+ G K V CG ++A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G++Y WG
Sbjct: 232 --NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTANQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ V+ A G ++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYN 232
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 251
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 43 PARLCGGDSWKDVC---GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
P RL + K C G G LAT+E G++ TWG S L +G P
Sbjct: 89 PRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGH---NAYSQLGNGTTNHGLVPCH 144
Query: 100 LPTEAS---VVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
+ T S V++ A G H + +T GEV+ WG + ++G ST
Sbjct: 145 ISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-------------YNNSGQVGSGSTVN 191
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLV 206
Q +K + + + E G+ +PC V
Sbjct: 192 QPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV 251
Query: 207 TLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM-VPTP 256
G+++ +VA G HTL+L+D GQV+ WG GQLG G++ PTP
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTP 302
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
L PC ++ N K + +VA G H+L+L+ G+V+ WGY GQ+G GS + P P +
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-PIPRRV 198
Query: 260 P-CLEH-----AASGKDRPL-LVRQGSV-----NSSGKAGRSY----------------- 290
CL++ A G+ + +V G V N +G+ G
Sbjct: 199 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 258
Query: 291 VKEIACGGRHSAVVTD 306
V+ +ACG H+ V+TD
Sbjct: 259 VQRVACGYAHTLVLTD 274
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 22 VYMWGYL-PGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSA 78
V+ WGY G S + PIP R+ G K V CG +A ++G++ WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY- 231
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTE--ASVVKAAAGWAHCVSVTEAGEVYTWG 129
G L G G P P + V + A G+AH + +T+ G+VY WG
Sbjct: 232 --NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 27/113 (23%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
GD T+ P + G KI ++ G G H ++ + G+V+ WG+ QLG G+
Sbjct: 81 GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT----- 135
Query: 254 PTPH-LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
T H L+PC S N S K V E+ACG HS V+T
Sbjct: 136 -TNHGLVPC---------------HISTNLSNKQ----VIEVACGSYHSLVLT 168
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 42 IPARLCGGDSWKDVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFP 99
+P + S K V CG +L + G++ WG ++ GQ + SG P P
Sbjct: 141 VPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG-YNNSGQ--VGSGSTVNQPIPRR 197
Query: 100 LP---TEASVVKAAAGWAHCVSVTEAGEVYTWGWR 131
+ VV A G C++V + GEVY WG+
Sbjct: 198 VTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 104/278 (37%), Gaps = 96/278 (34%)
Query: 59 GCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
CG +LA S+ G+L +WG+ D +T+ P + ++++ + G HC
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEV 176
+++ G+ +TWG S + GK+ P+ QA P R+ E
Sbjct: 150 LALAADGQFFTWG----------------KNSHGQLGLGKE--FPS-QASPQRVRSLE-- 188
Query: 177 VKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
G+ + +VAAGG H+ LS G V+GW
Sbjct: 189 ----------------------------------GIPLAQVAAGGAHSFALSLSGAVFGW 214
Query: 237 GYGGEGQLGLGSR--------IKMVPTPHL--IPC-LEHAASGKDRPLLVRQGSV----- 280
G GQLGL +K++ T + I C EH A +L + G V
Sbjct: 215 GMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTA------VLTKSGGVFTFGA 268
Query: 281 NSSGKAGR-----------------SYVKEIACGGRHS 301
S G+ G S V +IACG +H+
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHT 306
Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 25 WGYLPGTSPEKSPILSPIPA--RLCGGDSWKDV----CGGGCGFALATSESGKLITWGSA 78
WGY P S L I A ++CG S + V CGG L E G++ T G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLL--EDGEVYTCG-L 60
Query: 79 DDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAK 138
+ +GQ L + G PE + ++ A G +H +++++ G++++WG
Sbjct: 61 NTKGQ--LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG--------- 109
Query: 139 VTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEF 198
AGS G+ + TE D A ++++ +
Sbjct: 110 -------AGS-----DGQLGLMTTE-----DSVAVPRLIQKLNQQT-------------- 138
Query: 199 FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
I +V+ G H L L+ GQ + WG GQLGLG +P
Sbjct: 139 ---------------ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQR 183
Query: 259 ------IPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE-------------- 293
IP + AA G L G+V N++G+ G S K+
Sbjct: 184 VRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK 243
Query: 294 ---IACGGRHSAVVT 305
I+CG H+AV+T
Sbjct: 244 VVYISCGEEHTAVLT 258
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 104/271 (38%), Gaps = 33/271 (12%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L T+E G + WG G S L +G + P + T V++ A G H +++
Sbjct: 87 VLLTTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GE++ WG+ C G GS ST Q KR +
Sbjct: 144 AADGELFAWGYNNC----------GQVGS---GSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 180 RKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
+ + + E G+ L+P V G+ + ++ G HTL L+D
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250
Query: 230 MGQVWGWGYGGEGQLGLGSRIKMV-PTPHLI 259
G ++ WG GQLG GS+ ++ PT ++
Sbjct: 251 EGLLYAWGANTYGQLGTGSKNNLLSPTQIMV 281
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 31/136 (22%)
Query: 201 LSPCLVTLNPGVK-ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
++P V N +K + +VA G H++ L+ G+++ WGY GQ+G GS PTP +
Sbjct: 116 IAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ-PTPRKV 174
Query: 260 P-CLE-----HAASGKDRPLLVRQ-GSV-----NSSGKAGRSY----------------- 290
CL + A G+ + V G V N +G+ G
Sbjct: 175 TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMC 234
Query: 291 VKEIACGGRHSAVVTD 306
V +I CG H+ +TD
Sbjct: 235 VNQIVCGYAHTLALTD 250
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD TL P + G KI ++ G G H L+ ++ G V+ WG+ G QLG G+ +
Sbjct: 56 TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ + LL++Q V E+ACG HS +
Sbjct: 116 IAPVQVCT-----------NLLIKQ-------------VIEVACGSHHSMAL 143
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQT------------SPQLLKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V EIACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTS 307
Score = 48.9 bits (115), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG+ K +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
Score = 39.3 bits (90), Expect = 0.041, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 29/204 (14%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYL-TSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG+ +LA S++ ++ WG + GQ L T K +P+ ++ AAG AH
Sbjct: 143 ACGYYHSLALSKASEVFCWGQ-NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAH 201
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------S 168
+T +G ++ WG FG G ++ + L + ++
Sbjct: 202 SFVLTLSGAIFGWG----------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGE 251
Query: 169 DKRAG---EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT- 224
D A E V + N S + ++P V G +T++A G +HT
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHE----INPRKVFELMGSIVTEIACGRQHTS 307
Query: 225 LILSDMGQVWGWGYGGEGQLGLGS 248
+ G+++ +G GG GQLG GS
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGS 331
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 108/279 (38%), Gaps = 50/279 (17%)
Query: 5 GSKREENEKMEECKETVVYMWGY--LPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGF 62
G+ E + + E V+ Y GT +S ++ LCG K + G
Sbjct: 28 GTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCG-KKIKSLSYGSGPH 86
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA---SVVKAAAGWAHCVSV 119
L ++E G + WG G S L +G + P + T VV+ A G H +++
Sbjct: 87 VLLSTEDGVVYAWGH---NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 120 TEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKR 179
GEV+ WG+ C G GS ST Q P+ ++ + +
Sbjct: 144 AADGEVFAWGYNNC----------GQVGS---GSTANQ---------PTPRKVTNCLHIK 181
Query: 180 RKTSSAREESENPASGD--EFF-----------------TLSPCLVTLNPGVKITKVAAG 220
R A ++ + A D E + L+P V V + ++ G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCG 241
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
HTL L+D G ++ WG GQLG G++ ++ H++
Sbjct: 242 YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 194 SGDEFFTLSPCLVTLNPGVKITKVAAG-GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKM 252
+GD TL P + G KI ++ G G H L+ ++ G V+ WG+ G QLG G+ +
Sbjct: 56 TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQG 115
Query: 253 VPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ + LL++Q V E+ACG HS +
Sbjct: 116 IAPVQVCT-----------NLLIKQ-------------VVEVACGSHHSMAL 143
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 62/287 (21%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V A G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVACGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRH 223
+A + + ++++ SP L+ G+ +VAAGG H
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQT------------SPQLIKSLLGIPFMQVAAGGAH 201
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR-PLLVRQ 277
+ +L+ G ++GWG GQLGL P+L+ L + G+D L ++
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 278 GSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
G V + G G S V ++ACG +H++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 307
Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
Score = 36.6 bits (83), Expect = 0.24, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 29/204 (14%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG+ +LA S++ ++ WG + GQ L +T P+ ++ AAG AH
Sbjct: 143 ACGYYHSLALSKASEVFCWGQ-NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------S 168
+T +G ++ WG FG G ++ + L + ++
Sbjct: 202 SFVLTLSGAIFGWG----------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGE 251
Query: 169 DKRAG---EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT- 224
D A E V + N S + ++P V G +T+VA G +HT
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHE----INPRKVFELMGSIVTQVACGRQHTS 307
Query: 225 LILSDMGQVWGWGYGGEGQLGLGS 248
+ G+++ +G GG GQLG GS
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGS 331
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 55.1 bits (131), Expect = 6e-07, Method: Composition-based stats.
Identities = 71/294 (24%), Positives = 116/294 (39%), Gaps = 76/294 (25%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
GCG + + G + T G +D GQ L K + PE ++V + G AH
Sbjct: 40 GCGLRHTVFVLDDGTVYTCG-CNDLGQ--LGHEKSRKKPEQVVALDAQNIVAVSCGEAHT 96
Query: 117 VSVTEAGEVYTWGW-----------RECVPSAKVTRDFGSAGSFQ--KDSTGKQSALPTE 163
+++ + G+VY WG EC+ +V R+ S Q + + G +L
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECI---RVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 164 QAPP-----SDK--RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITK 216
+A +K + G + +++TS P L+ G+ +
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTS-------------------PQLIKSLLGIPFMQ 194
Query: 217 VAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE-----HAASGKDR 271
VAAGG H+ +L+ G ++GWG GQLGL P+L+ L + G+D
Sbjct: 195 VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDH 253
Query: 272 -PLLVRQGSVNSSGKAGR----------------------SYVKEIACGGRHSA 302
L ++G V + G G S V +IACG +H++
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL------IPCLEHA 265
++I +VA G H+L LS +V+ WG GQLGLG + +P L IP ++ A
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 266 ASGKDRPLLVRQGSV-----NSSGKAGRS-----YVKE------------IACGGRHSAV 303
A G +L G++ N G+ G + YV I CG H+A
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256
Query: 304 VT 305
+T
Sbjct: 257 LT 258
Score = 35.8 bits (81), Expect = 0.43, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 29/204 (14%)
Query: 59 GCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGET-PEPFPLPTEASVVKAAAGWAH 115
CG+ +LA S++ ++ WG + GQ L +T P+ ++ AAG AH
Sbjct: 143 ACGYYHSLALSKASEVFCWGQ-NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAH 201
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPP-------S 168
+T +G ++ WG FG G ++ + L + ++
Sbjct: 202 SFVLTLSGAIFGWG----------RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGE 251
Query: 169 DKRAG---EEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHT- 224
D A E V + N S + ++P V G +T++A G +HT
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHE----INPRKVFELMGSIVTQIACGRQHTS 307
Query: 225 LILSDMGQVWGWGYGGEGQLGLGS 248
+ G+++ +G GG GQLG GS
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGS 331
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 49/201 (24%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------PEPFPLPTEA----SVVK 108
G L +G++ +WG+ G+HG+ E P EA + K
Sbjct: 169 GAEHVLLLCAAGQVFSWGA-----------GRHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 109 AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPS 168
AAG H V ++E G++Y WGW E Q ALPT +
Sbjct: 218 VAAGGWHSVCLSETGDIYIWGWNE----------------------SGQLALPTRSG--T 253
Query: 169 DKRAGEEVVKRRKTSSAREESENPASGD--EFFTLSP--CLVTLNPGVKITKVAAGGRHT 224
+ +A E +EE +G F + P L+ L G + G RHT
Sbjct: 254 ENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHT 313
Query: 225 LILSDMGQVWGWGYGGEGQLG 245
+++ G+++ WG+G GQLG
Sbjct: 314 AVVTRTGELYTWGWGKYGQLG 334
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 83 QSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRD 142
Q+ + H P PL + + +AGW++ VT G V G +A RD
Sbjct: 19 QALGSGNSHHSVYSPEPLHASDDICQVSAGWSYTALVTRGGRVELSG--SVSGAADGCRD 76
Query: 143 FGSAGSFQKDSTGKQSALPTEQA-PPSDKRAGEEVVKRRKTSSAREESENPASGDE---F 198
++ K + QA P GE + + S A+ + E+ S +
Sbjct: 77 VWASEELLVLLRNKGGSSTEVQAWVPGSALQGEPLWVQNLVSGAKGQGEDEPSRESRMGT 136
Query: 199 FTLSPC---LVT--------LNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
L PC VT L P +++ ++ G H L+L GQV+ WG G GQLG G
Sbjct: 137 LPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG 196
Query: 248 SRIKMVPTPHLIPCLE 263
+ ++ P L+ L+
Sbjct: 197 T-LEAELEPRLLEALQ 211
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIP 260
L P L+ G+++ KVAAGG H++ LS+ G ++ WG+ GQL L +R
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREE 261
Query: 261 CLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEI-----------ACGGRHSAVVT 305
E G L V + A + + + +CG RH+AVVT
Sbjct: 262 ATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVT 317
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 39/218 (17%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA-----SVVKAAAG 112
G G LA + G++ +WG D Y G + + +P + VV +AG
Sbjct: 465 GSDGHTLAFTTEGEVFSWGDGD-----YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAG 519
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
+ H +VTE GE+YTWG DFG G DS + +PT S+
Sbjct: 520 YRHSAAVTEDGELYTWG----------EGDFGRLG--HGDSNSRN--IPTLVKDISN--V 563
Query: 173 GEEVVKRRKTSSAREESENPAS-----------GDEFFTLSPCLVTLNPGVKITKVAAGG 221
GE T + ++ S GD P ++ G+ I KV AG
Sbjct: 564 GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGS 623
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+ +L L+ GQV+ WG G LG GS P LI
Sbjct: 624 QSSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLI 659
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 88/234 (37%), Gaps = 48/234 (20%)
Query: 33 PEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHG 92
P +P S +CG + + G A G+L G++DD + S G
Sbjct: 4020 PAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRL-GQGNSDDLHVLTVISALQG 4078
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
+V + H +++TE+GEV++WG D+G G D
Sbjct: 4079 FVV--------TQLVTSCGSDGHSMALTESGEVFSWG----------DGDYGKLGHGNSD 4120
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLS---------- 202
+ + Q GEEVV + S + S S + FT
Sbjct: 4121 RQRRPRQIEALQ--------GEEVV---QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Query: 203 -------PCLVTLNPGVKITKVAAGGRHTLILS-DMGQVWGWGYGGEGQLGLGS 248
P VT G +I +VA G HTL +S D VW +G G G+LGLG+
Sbjct: 4170 NTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 4223
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 43/231 (18%)
Query: 53 KDVCGGGCGF---ALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKA 109
++V CGF A+ TS+ GKL T+G+ D G+ L + + + PE + +
Sbjct: 4134 EEVVQMSCGFKHSAVVTSD-GKLFTFGNGD-YGRLGLGNTSNKKLPERVTALEGYQIGQV 4191
Query: 110 AAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSD 169
A G H ++V+ G + W FG G + K G +A + Q D
Sbjct: 4192 ACGLNHTLAVSADGSM-VWA-------------FGD-GDYGKLGLGNSTAKSSPQK--ID 4234
Query: 170 KRAGEEVVKRRKTSSAREESENPASGDEFFTL-----------------SPCLVTLNPGV 212
G + +K + + S +T P + + GV
Sbjct: 4235 VLCG---IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGV 4291
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
I VA G HTL L+ G V+ WG EGQLGLG V P L+ L+
Sbjct: 4292 IIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVTGLQ 4341
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 31 TSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGK 90
+SP+K +L CG K CG F++A ++ G + T+G G L G+
Sbjct: 4228 SSPQKIDVL-------CGIGIKKVACG--TQFSVALTKDGHVYTFGQDRLIG---LPEGR 4275
Query: 91 HGETPEPFPLPTEASVV--KAAAGWAHCVSVTEAGEVYTWG 129
P +P A V+ A G H +++ G+VY WG
Sbjct: 4276 ARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWG 4316
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
E L P L+ +I V+ G H L LS +V+ WG GQ G G+ + P
Sbjct: 650 EATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKP 709
Query: 257 HLIPCLE 263
+ L+
Sbjct: 710 KKVSGLD 716
Score = 31.2 bits (69), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 27/104 (25%)
Query: 206 VTLNPGVKITKVAAG---GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+T P I KV++ HTL + G+V+ WG G G+LG G+
Sbjct: 449 LTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGN-------------- 494
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+S + P L+ QG + GK V ++ G RHSA VT+
Sbjct: 495 ---SSTQKYPKLI-QGPLQ--GKV----VVCVSAGYRHSAAVTE 528
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 53 KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAG 112
+ VC G +LA + +G++ WG G +S P+ +V + G
Sbjct: 617 RKVCAGSQS-SLALTSTGQVYAWGCGACLGCG--SSEATALRPKLIEELAATRIVDVSIG 673
Query: 113 WAHCVSVTEAGEVYTWG 129
+HC++++ EVY WG
Sbjct: 674 DSHCLALSHDNEVYAWG 690
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 53.5 bits (127), Expect = 2e-06, Method: Composition-based stats.
Identities = 63/245 (25%), Positives = 88/245 (35%), Gaps = 86/245 (35%)
Query: 93 ETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKD 152
E PEP + V + G H V+V G+V+ WG GS G
Sbjct: 63 ERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG-------------AGSEGQLGIG 109
Query: 153 STGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGV 212
+ S +PT+ + G+
Sbjct: 110 EFKEISFMPTK------------------------------------------IKALAGI 127
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG--SRIKMVP----TPHLIPCLEHAA 266
KI +V+ G H+L LS+ G V+ WG EGQLGLG SR + +P + IP + AA
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187
Query: 267 SGKDRPLLVRQGS-----VNSSGKAGRS--YVKE------------------IACGGRHS 301
G L G+ N SG+ S VKE I+CG H+
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 302 AVVTD 306
AV+T+
Sbjct: 248 AVLTE 252
Score = 35.0 bits (79), Expect = 0.76, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET---PEPFPLPTEASVVKAAAGW 113
GG FAL S +G WGS + GQ L+ K E P SV+ + G+
Sbjct: 188 GGTHSFAL--SLTGTSFGWGS-NRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGY 244
Query: 114 AHCVSVTEAGEVYTWG 129
H +TE G+V+T+G
Sbjct: 245 EHTAVLTEEGQVFTFG 260
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 99/255 (38%), Gaps = 83/255 (32%)
Query: 54 DVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEASVVKAA 110
D+ G +LA G++ WG A EGQ L G+ E TP+ + +++ +
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWG-AGSEGQ--LGIGEFKEISFTPKKIMTLNDIKIIQVS 134
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
G H +++++ +V++WG G G GK+ P+ QA P
Sbjct: 135 CGHYHSLALSKDSQVFSWG----------KNSHGQLG------LGKE--FPS-QASPQRV 175
Query: 171 RAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDM 230
R+ E G+ + +VAAGG H+ LS
Sbjct: 176 RSLE------------------------------------GIPLAQVAAGGAHSFALSLC 199
Query: 231 GQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSY 290
G +GWG GQL L R VP ++PL V G++ + G
Sbjct: 200 GTSFGWGSNSAGQLALSGR--NVPV------------QSNKPLSV--GALKNLG------ 237
Query: 291 VKEIACGGRHSAVVT 305
V I+CG H+AV+T
Sbjct: 238 VVYISCGDAHTAVLT 252
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
+ V+ G H+L + G+V+ WG G EGQLG+G ++ TP I L
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL 125
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG-LGSRIKMVPTPHLIPCLEH--- 264
+PG ++ + A+G RH+L+L +V G GQLG G++ +P P I LE
Sbjct: 20 SPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIV 77
Query: 265 --AASGKDRPLLV-RQGSV-----NSSGKAGRSYVKEIACGGRHSAVVTDM 307
+ GK+ L V +G V S G+ G KEI+ + + D+
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI 128
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 27/100 (27%)
Query: 210 PGV--KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAAS 267
PG+ K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P I EH
Sbjct: 239 PGIPGKVVQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAI---EHIKD 294
Query: 268 GKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
K + IACG H+A++TDM
Sbjct: 295 QK---------------------ISFIACGENHTALITDM 313
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL- 262
C+ L P K+ A G HTL+ ++ G+V+ G EGQLGLG + T HLI
Sbjct: 80 CVKALKPE-KVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGD-TEERSTFHLISFFT 137
Query: 263 ------EHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IAC 296
+ +A L G + NS G+ G V I+C
Sbjct: 138 SQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWISC 197
Query: 297 GGRHSAVVT 305
G HSA VT
Sbjct: 198 GYYHSAFVT 206
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 23/107 (21%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
F T P + KI+ +A G HT +++DMG ++ +G G G+LGLG T
Sbjct: 281 FETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLE---NSTNQ 337
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
IP L R V+ ++CGG H+ V
Sbjct: 338 FIPTL--------------------CSNFLRFIVQLVSCGGCHTLVF 364
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK----AAAGW 113
G + A +E G+L WG + EGQ L E +P + +V K + G+
Sbjct: 147 AGSNTSAALTEDGELFMWGD-NSEGQIGL------ENVTNVCVPQQVTVGKPISWISCGY 199
Query: 114 AHCVSVTEAGEVYTWGWREC 133
H VT G++YT+G EC
Sbjct: 200 YHSAFVTTEGQLYTFGEPEC 219
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL-----EHAASGK 269
T ++ G HT +++ +++ +G GQLGLGS+ V P + L + AA G+
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSK-STVSKPTCVKALKPEKVKFAACGR 96
Query: 270 DRPLLVRQG 278
+ L+ +G
Sbjct: 97 NHTLVSTEG 105
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE----- 263
GV++ VA+G H+L+++ G++W WG +GQLG G IK + P LI L+
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLKGEVFV 196
Query: 264 HAASGKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAV 303
HAA G++ L L GSV + G+ + + ++ G + AV
Sbjct: 197 HAACGRNHTLALTENGSVYAFGE---NKMGQLGLGNKTDAV 234
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P L+ G A G HTL L++ G V+ +G GQLGLG++ VP+P I
Sbjct: 184 PKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI 240
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P V + +A G H+LIL +V+ WG+GG G+LG R +MVP
Sbjct: 319 PNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 91/260 (35%), Gaps = 73/260 (28%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +D+GQ K + P+ V AA
Sbjct: 142 RSVASGSCAAHSLLITVEGKLWSWGR-NDKGQLGHGDIKRIDVPKLIESLKGEVFVHAAC 200
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +++TE G VY FG Q K A+P
Sbjct: 201 GRNHTLALTENGSVYA---------------FGENKMGQLGLGNKTDAVP---------- 235
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
SP + N G ITKVA G ++I+ G
Sbjct: 236 ------------------------------SPAQILYN-GQPITKVACGAEFSMIMDCKG 264
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVN-SSGKAGR-- 288
++ +G GQLG S K + I D L+ R+ ++ K G+
Sbjct: 265 NLYSFGCPEYGQLGHNSDGKYIARAQRIEY--------DCELIARRIAIFIEKTKDGQIL 316
Query: 289 ----SYVKEIACGGRHSAVV 304
V++IACG HS ++
Sbjct: 317 PVPNVVVRDIACGINHSLIL 336
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 88/233 (37%), Gaps = 51/233 (21%)
Query: 59 GCGFALATSESGKLITWGSADD--EGQSYLTSGK-HGETPEPFPLPTEASVVKAAAGWAH 115
G +A + +GK+ TWG+ G+ L + G TP+P L +++ AG H
Sbjct: 234 GTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL---KNIISVGAGSYH 290
Query: 116 CVSVTEAGEVYTWGW---REC-----------VPSAKVTRDFGSAGSFQKDSTGKQSALP 161
++ G VY WG R+C V + D + + + G+ L
Sbjct: 291 SFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLA 350
Query: 162 T--------------EQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVT 207
Q D E VVK K G+ ++ +P ++
Sbjct: 351 LLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEK-------------GNNYYLSTPTII- 396
Query: 208 LNPGV-KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
PG+ + +V G H L ++ G+V+ WG ++G G + V P L+
Sbjct: 397 --PGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLV 447
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 86/234 (36%), Gaps = 47/234 (20%)
Query: 38 ILSPIPARLCGGDSWKDVCGGGCGFAL--ATSESGKLITWGS--ADDEGQSYLTSGKHGE 93
+L P+++ G S V C L A +++G TWG+ D Y S K
Sbjct: 159 LLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTA 218
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG----------------WRECVPSA 137
P LP + + A G H +++T G+VYTWG + P
Sbjct: 219 EPTQMRLP---EICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQP 275
Query: 138 KVTRDFGSAG-----SFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENP 192
++ S G SF D+ G+ A ++ G EV E+ E
Sbjct: 276 LALKNIISVGAGSYHSFAIDNKGRVYAWGLNIT----RQCGIEV----------EDEEEG 321
Query: 193 ASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGL 246
A P LV G + + G HTL L + G+V WG QLG+
Sbjct: 322 A-----VITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGI 370
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 28/168 (16%)
Query: 97 PFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGK 156
P + VV A G H +++ G VYTWG + ++T+D QKD G
Sbjct: 101 PILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKD-------QKDENGD 153
Query: 157 QSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE-------FFTLSPCLVTLN 209
+ + PS + R T ++ A D F S ++ +
Sbjct: 154 KVDNDLLEGTPSKVEGA--LSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYS 211
Query: 210 PGVK------------ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
K I ++A G H + L+ G+V+ WG G + QLG
Sbjct: 212 DSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLG 259
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHGET------------PEPFPLPTEAS 105
GG LA E G+++ WG DD Q + ET P +P +
Sbjct: 343 GGEHHTLALLEDGRVLAWGR-DDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN 401
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWGWRE 132
V++ G H ++VT G+VY+WG E
Sbjct: 402 VIQVVCGTHHNLAVTSDGKVYSWGSAE 428
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSG----KHGETPEPFPLPTEASVVKAAAGWA 114
G F+LA + +G++ TWG D Y G +H P+P V+ A G
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGD-----YYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL 3293
Query: 115 HCVSVTEAGEVYTWG 129
HC++VT+AG+VY WG
Sbjct: 3294 HCLAVTDAGQVYAWG 3308
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 25/94 (26%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R+ DR
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSY-----------------DR 4178
Query: 272 PLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P LV + S V +IACG HSA +T
Sbjct: 4179 PKLVEHLNGMS--------VADIACGSAHSAAIT 4204
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 66/222 (29%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA- 104
L G + CG G L ++ + +WG D Y G+ G P E+
Sbjct: 4237 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD-----YGKLGRGGSDGCKLPYKIESL 4291
Query: 105 ---SVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
VVK G V++T++G VYTWG G F + G
Sbjct: 4292 AGLGVVKVECGSQFSVALTKSGAVYTWG----------------KGDFHRLGHGS----- 4330
Query: 162 TEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGG 221
+ V+R K +A + G KI +A G
Sbjct: 4331 ------------VDHVRRPKKVAALQ-----------------------GKKIISIATGS 4355
Query: 222 RHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
H + SD G+V+ WG EGQLG G+ + + P L+ L+
Sbjct: 4356 LHCVACSDSGEVYTWGDNDEGQLGDGT-VTAIQRPRLVAALQ 4396
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 27/95 (28%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDR 271
VK V +GG+H L L+ G+V+ WG G +G+LG G+R + D+
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTL-----------------DK 3115
Query: 272 PLLVRQGSVNSSGKAGRS-YVKEIACGGRHSAVVT 305
P LV +A R+ ++++ACG HSA ++
Sbjct: 3116 PRLV---------EALRAKKIRDVACGSSHSAAIS 3141
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 58 GGCGFALATSESGKLITWGSADDEGQSYLTSGKHG-ETPEPFPLPTEASVVKAAAGWAHC 116
G F++A S G+L TWG A G + G P +V A AHC
Sbjct: 779 AGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHC 838
Query: 117 VSVTEAGEVYTWG 129
++++ +GEV+ WG
Sbjct: 839 LALSSSGEVFGWG 851
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 80/207 (38%), Gaps = 33/207 (15%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT-EASVVKAAA---G 112
GG S+ GK+ G + L G P P LP VVK A G
Sbjct: 3025 AGGSKSLFIVSQDGKVYACGEGTN---GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSG 3081
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H +++T G+V++WG E G G + + K + +A K+
Sbjct: 3082 GKHALALTLDGKVFSWGEGE----------DGKLGHGNRTTLDKPRLVEALRA----KKI 3127
Query: 173 GEEVVKRRKTSSAREESE----------NPASGDEFFTLSPCLVTLNPGVKITKVAAGGR 222
+ +++ + E GD L P LVT G ++ +VA G R
Sbjct: 3128 RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSR 3187
Query: 223 --HTLILSDMGQVWGWGYGGEGQLGLG 247
TL L++ G V+ WG G G+LG G
Sbjct: 3188 DAQTLALTEDGAVFSWGDGDFGKLGRG 3214
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 49/208 (23%)
Query: 63 ALATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAH 115
ALA + GK+ +WG +D GK G T P EA + A G +H
Sbjct: 3085 ALALTLDGKVFSWGEGED--------GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSH 3136
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++ GE+YTWG E +G G ++T + L T AG
Sbjct: 3137 SAAISSQGELYTWGLGE----------YGRLG-HGDNTTQLKPKLVT-------ALAGRR 3178
Query: 176 VV------KRRKTSSAREESENPASGDEFF----------TLSPCLVTLNPGVKITKVAA 219
VV + +T + E+ + GD F + +P + G+ + ++
Sbjct: 3179 VVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIEC 3238
Query: 220 GGRHTLILSDMGQVWGWGYGGEGQLGLG 247
G + +L L+ G+VW WG G +LG G
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGDYYRLGHG 3266
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 35/202 (17%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPT------EASVVKAA-- 110
GC ++ A + G L+TWG +Y G HG + + LPT + VV A
Sbjct: 676 GCSYSAAITCGGNLLTWGRG-----TYARLG-HGNSDDR-SLPTLVVALSDHMVVDVALG 728
Query: 111 AGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK 170
+G AH +++T G V+ WG D+G G+ + G + E P +
Sbjct: 729 SGDAHSLALTSEGLVFAWG----------DGDYGKLGN--GNCNGSLQPILVESLPRVQR 776
Query: 171 RAGEEVVKRRKTSSAREESENPAS--GDEFFTLS------PCLVTLNPGVKITKVAAGGR 222
+S + + A+ G + S P LV+ +I VA
Sbjct: 777 VFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA 836
Query: 223 HTLILSDMGQVWGWGYGGEGQL 244
H L LS G+V+GWG Q+
Sbjct: 837 HCLALSSSGEVFGWGRNDSQQI 858
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
G ++ VA G H L ++D GQV+ WG GQ G G+
Sbjct: 3282 GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGN 3319
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 55/144 (38%), Gaps = 8/144 (5%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSA-LPTEQA 165
V +G HC+++T GEVY WG E R + G A + A
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA 4198
Query: 166 PPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVA--AGGRH 223
+ A V+ K R GD L P LV G + +A +G
Sbjct: 4199 HSAAITASGHVLTWGKGRYGRL-----GHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 4253
Query: 224 TLILSDMGQVWGWGYGGEGQLGLG 247
TL ++D VW WG G G+LG G
Sbjct: 4254 TLCITDDDNVWSWGDGDYGKLGRG 4277
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHC 116
G G +LA + G + WG D L +G + +P + + V + AG
Sbjct: 728 GSGDAHSLALTSEGLVFAWGDGD---YGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFS 784
Query: 117 VSVTEAGEVYTWGWRECVPSAKVTR 141
V+++ G++YTWG C+ V R
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVER 809
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 46 LCGGDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS 105
L G + CG LA +E G + +WG D G+ + +TP +
Sbjct: 3174 LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGD-FGKLGRGGSEGSDTPHEIERLSGIG 3232
Query: 106 VVKAAAGWAHCVSVTEAGEVYTWG 129
VV+ G +++T AGEV+TWG
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWG 3256
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P LV KI VA G H+ +S G+++ WG G G+LG G T L P L
Sbjct: 3116 PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN-----TTQLKPKL 3170
Query: 263 EHAASGK 269
A +G+
Sbjct: 3171 VTALAGR 3177
Score = 31.6 bits (70), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 97/276 (35%), Gaps = 52/276 (18%)
Query: 10 ENEKMEECKETVVYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCG-FALATSE 68
E + + +E +Y W P P+P D + + G G LA
Sbjct: 581 ETQMLILSQEGKLYTWRL-------AKPEAEPLPMEEVAHDVFISIAGHCEGRHFLAIDS 633
Query: 69 SGKLITWGSADDEGQSYLTSGKHGET-----PEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
+ +WG+ +D HG+T P + V G ++ ++T G
Sbjct: 634 NHNAYSWGTGEDHRLG------HGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGG 687
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQS--ALPTEQAPPSDKRAGEEVVKRRK 181
+ TWG G++ + G +LPT SD + +
Sbjct: 688 NLLTWG----------------RGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 731
Query: 182 TSSAREESENP--ASGDEFF----------TLSPCLVTLNPGVKITKVAAGGRHTLILSD 229
S SE A GD + +L P LV P ++ +V AG + ++ LS
Sbjct: 732 AHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSS 789
Query: 230 MGQVWGWGYGG-EGQLGLGSRIKMVPTPHLIPCLEH 264
GQ++ WG G + ++ P L+ L+H
Sbjct: 790 EGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQH 825
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 26/106 (24%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPC 261
+P LV+ P K+ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I
Sbjct: 234 TPQLVSEIPE-KVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIEN 291
Query: 262 LEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
+ +D+ + SY I+CG H+A++TD+
Sbjct: 292 I------RDQTI---------------SY---ISCGENHTALITDI 313
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 50/130 (38%), Gaps = 31/130 (23%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR--------IKMVPT 255
C+ L P K+ A G HTL+ ++ G V+ G EGQLGLG I +
Sbjct: 80 CVKALKPE-KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS 138
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSV-----NSSGKAGRSYVKE---------------IA 295
H I L +A L G + NS G+ G V I+
Sbjct: 139 EHKIKQL--SAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196
Query: 296 CGGRHSAVVT 305
CG HSA VT
Sbjct: 197 CGYYHSAFVT 206
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 23/107 (21%)
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
F T P ++ I+ ++ G HT +++D+G ++ +G G G+LGLG T H
Sbjct: 281 FETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLE---NFTNH 337
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
IP L R VK +ACGG H V
Sbjct: 338 FIPTL--------------------CSNFLRFIVKLVACGGCHMVVF 364
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWG 3282
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 716
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 717 GSTHCLALTEDSEVHSWG 734
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4205 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4264 CTEDGEVYTWG 4274
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 117/323 (36%), Gaps = 77/323 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3034 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3092
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3093 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3137
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3138 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3249
Query: 258 LIPCLE-----HAASGKDRPLLVRQ-GSV-----NSSGKAGR-----------------S 289
++ L H A G L V G V N G+ G
Sbjct: 3250 VVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQ 3309
Query: 290 YVKEIACGGRHSAVVT--DMSYP 310
+ +ACG HS T D++ P
Sbjct: 3310 KITRVACGSSHSVAWTTVDVATP 3332
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 200 TLSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
TL+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPK 539
Query: 258 LIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+I SGK +V IACG +SA +T
Sbjct: 540 VISAF--------------------SGKQAGKHVVHIACGSTYSAAIT 567
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 516 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 572
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 573 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 623
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 624 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 734 GSNDQCQHFDTLRVTK-PEPAALPGLD 759
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 29/107 (27%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4077
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVT 305
PC DRP ++ ++ R V ++A GG HSA VT
Sbjct: 4078 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVT 4107
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 78/203 (38%), Gaps = 24/203 (11%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ G A + S G P P + +S VVK A G
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISS--GTVPIPRQITALSSYVVKKVAVHSG 3055
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3056 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3105
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3106 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3165
Query: 225 LILSDMGQVWGWGYGGEGQLGLG 247
L L+D G V+ WG G G+LG G
Sbjct: 3166 LALTDEGLVFSWGDGDFGKLGRG 3188
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 87/212 (41%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG C G G G +P
Sbjct: 494 NIVKIAAHSDGHHYLALAATGEVYSWG---C----------GDGGRL-----GHGDTVPL 535
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 593
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 594 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 651
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 652 EKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 683
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4052 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4104 ACVTAAGDLYTWG 4116
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 30/155 (19%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4101
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4102 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4145
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+A +G TL L+D VW WG G G+LG G
Sbjct: 4146 VDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ +A G H + ++ G+V+ WG EGQLG G+ + P L+ L+
Sbjct: 4248 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLVAALQ 4299
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ ++ VVK
Sbjct: 4150 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4204
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T++G VYTWG
Sbjct: 4205 GSQFSVALTKSGAVYTWG 4222
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 55 VCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGK----HGETPEPFPLPTEASVVK 108
VC CG F+LA ++SG + TWG D Y G H P+ +V
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGD-----YFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262
Query: 109 AAAGWAHCVSVTEAGEVYTWG 129
A G HC++VT++G+VY WG
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWG 3283
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 59 GCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVS 118
G F++A ++SG + TWG D + S H P V+ A G HCV
Sbjct: 4207 GSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 119 VTEAGEVYTWG 129
TE GEVYTWG
Sbjct: 4266 CTEDGEVYTWG 4276
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 54 DVCGGGCG--FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
DV CG F++A ++ G++ +WG D++ + T +H P+ V+ AA
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE-EHVRYPKLLEGLQGKKVIDVAA 717
Query: 112 GWAHCVSVTEAGEVYTWG 129
G HC+++TE EV++WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 117/323 (36%), Gaps = 77/323 (23%)
Query: 41 PIPARLCGGDSW---KDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEP 97
PIP ++ S+ K G A A + GK+ +WG DD G+ S + + P
Sbjct: 3035 PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD-GKLGHFSRMNCDKPRL 3093
Query: 98 FPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQ 157
+ A G +H ++T +GE+YTWG E +G G D+T
Sbjct: 3094 IEALKTKRIRDIACGSSHSAALTSSGELYTWGLGE----------YGRLG--HGDNT--- 3138
Query: 158 SALPTEQAPPSDK-RAGEEVVKRRKTSSAREESENPASGDEFFTLS-------------- 202
T+ P K G V+ + + +++ A DE S
Sbjct: 3139 ----TQLKPKMVKVLLGHRVI---QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 203 -----PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPH 257
P + G + ++ G + +L L+ G VW WG G +LG GS + V P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH-VRKPQ 3250
Query: 258 LIPCLE-----HAASGKDRPLLVRQ-GSV-----NSSGKAGR-----------------S 289
++ L H A G L V G V N G+ G
Sbjct: 3251 VVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQ 3310
Query: 290 YVKEIACGGRHSAVVT--DMSYP 310
+ +ACG HS T D++ P
Sbjct: 3311 KITRVACGSSHSVAWTTVDVATP 3333
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 48/267 (17%)
Query: 22 VYMWGYLPG-------TSPEKSPILSPIPARLCGGDSWKDVCGGGCG--FALATSESGKL 72
VY WG G T P + P + + G + K V CG ++ A + G+L
Sbjct: 517 VYSWGCGDGGRLGHGDTVPLEEP---KVISAFSGKQAGKHVVHIACGSTYSAAITAEGEL 573
Query: 73 ITWG----------SADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
TWG S++DE L +G G + V +G A ++VTE
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKG---------LKVIDVACGSGDAQTLAVTEN 624
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDK-RAGEE----VV 177
G+V++WG D+G G D + Q K R G + +
Sbjct: 625 GQVWSWG----------DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 178 KRRKTSS-AREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGW 236
K + S + +++ G E P L+ G K+ VAAG H L L++ +V W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 237 GYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G + Q R+ P P +P L+
Sbjct: 735 GSNDQCQHFDTLRVTK-PEPTALPGLD 760
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 29/107 (27%)
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
+P L+ V I KVA +GG+H L LS G+V+ WG +G+LG G+R
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNR---------S 4079
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSY-VKEIACGGRHSAVVT 305
PC DRP ++ ++ R V ++A GG HSA VT
Sbjct: 4080 PC--------DRPRVI---------ESLRGIEVVDVAAGGAHSACVT 4109
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 23/107 (21%)
Query: 201 LSPCLVTLNPGVKITKVAA--GGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
L+P LV I K+AA G H L L+ G+V+ WG G G+LG G + + P +
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL-EEPKV 541
Query: 259 IPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
I SGK +V IACG +SA +T
Sbjct: 542 ISAF--------------------SGKQAGKHVVHIACGSTYSAAIT 568
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 79/203 (38%), Gaps = 24/203 (11%)
Query: 57 GGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEAS-VVKAAA---G 112
GG A + GK+ + G A + S G P P + +S VVK A G
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSS--GTVPIPRQITALSSYVVKKVAVHSG 3056
Query: 113 WAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRA 172
H ++T G+V++WG D G G F + + K + + A
Sbjct: 3057 GRHATALTVDGKVFSWG----------EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIA 3106
Query: 173 GEEVVKRRKTSSARE------ESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGR--HT 224
TSS E GD L P +V + G ++ +VA G R T
Sbjct: 3107 CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQT 3166
Query: 225 LILSDMGQVWGWGYGGEGQLGLG 247
L L+D G V+ WG G G+LG G
Sbjct: 3167 LALTDEGLVFSWGDGDFGKLGRG 3189
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 87/212 (41%), Gaps = 53/212 (25%)
Query: 105 SVVKAAA--GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT 162
++VK AA H +++ GEVY+WG C G G G +P
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWG---C----------GDGGRL-----GHGDTVPL 536
Query: 163 EQ----APPSDKRAGEEVVKRR--KTSSAREESE---------------NPASGDEFFTL 201
E+ + S K+AG+ VV T SA +E + +S DE
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-- 594
Query: 202 SPCLVTLNPGVKITKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
P LV G+K+ VA +G TL +++ GQVW WG G G+LG G TP LI
Sbjct: 595 -PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS-DGCKTPKLI 652
Query: 260 PCLEHAASGKDR------PLLVRQGSVNSSGK 285
L+ K R L + G V S GK
Sbjct: 653 EKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK 684
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGE---TPEPFPLPTEA----SVVKAAAGWAHC 116
LA S G++ +WG A+D GK G +P P E+ VV AAG AH
Sbjct: 4054 LALSSEGEVYSWGEAED--------GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105
Query: 117 VSVTEAGEVYTWG 129
VT AG++YTWG
Sbjct: 4106 ACVTAAGDLYTWG 4118
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 30/155 (19%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGW----------RECVPSAKVTRDFGSAGSFQKDSTGK 156
V +G HC++++ GEVY+WG R +V + G
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA 4103
Query: 157 QSALPTEQAPPSDKRAGEEVV--KRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
SA T AG+ K R +SE+ L P LV G ++
Sbjct: 4104 HSACVTA--------AGDLYTWGKGRYGRLGHSDSED--------QLKPKLVEALQGHRV 4147
Query: 215 TKVA--AGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+A +G TL L+D VW WG G G+LG G
Sbjct: 4148 IDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
G K+ +A G H + ++ G+V+ WG EGQLG G+ + P L+ L+
Sbjct: 4250 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT-TNAIQRPRLVAALQ 4301
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEA----SVVKAAA 111
CG G L ++ + +WG D Y G+ G P+ ++ VVK
Sbjct: 4152 CGSGDAQTLCLTDDDTVWSWGDGD-----YGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4206
Query: 112 GWAHCVSVTEAGEVYTWG 129
G V++T++G VYTWG
Sbjct: 4207 GSQFSVALTKSGAVYTWG 4224
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 93/229 (40%), Gaps = 47/229 (20%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G TPE P +V++AA G H V +TE GEVY++G W+ E PS+ +
Sbjct: 25 AGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWKSEAAEICPSSPLL 84
Query: 141 RDFGSAGSFQKDSTGK-QSALPTEQAPPS---DKRAGEEVVKRRKTSSAREESENPASGD 196
+TG S TE + AG+ V ++ S E S S
Sbjct: 85 ESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVS--EPSPVSISDS 142
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
E SP L V+I ++A G HTL LS ++W WG G QLGL + V P
Sbjct: 143 E---TSPLL-----AVRILQLACGEEHTLALSISREIWAWGTG--CQLGLITTTFPVTKP 192
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ EH AGR V ++ACG HS +
Sbjct: 193 QKV---EHL--------------------AGR-VVLQVACGAFHSLALV 217
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P V G ++ + AGG H+L L+ QV+ WG GQLG VP
Sbjct: 536 GDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVP 595
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V +T +G L+ S +VW WG G EGQLG G + + P + CL+
Sbjct: 501 VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLD 551
>sp|Q5BIW4|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1
Length = 1657
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 91/223 (40%), Gaps = 47/223 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVTRDFGSA 146
TPE P +V++AA G H V +TE GEVY++G WR E PS+ + +
Sbjct: 31 TPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVG 90
Query: 147 GSFQKDSTGK-QSALPTEQAPPS---DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
+TG S T+ + AG+ V ++ NP S + S
Sbjct: 91 QYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVP----EPNPVSIADS-EAS 145
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L V+I ++A G HTL LS ++W WG G QLGL + V P +
Sbjct: 146 PLL-----AVRILQLACGEEHTLALSISREIWAWGTG--CQLGLITTAFPVTKPQKV--- 195
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
EH AGR V ++ACG HS +
Sbjct: 196 EHL--------------------AGR-VVLQVACGAFHSLALV 217
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P V G ++ + AGG H+L L+ QV+ WG GQLG VP
Sbjct: 542 GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVP 601
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V +T +G L+ S +VW WG G EGQLG G + + P + CL+
Sbjct: 507 VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLD 557
>sp|Q96Q42|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=2
Length = 1657
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 91/223 (40%), Gaps = 47/223 (21%)
Query: 94 TPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVTRDFGSA 146
TPE P +V++AA G H V +TE GEVY++G WR E PS+ + +
Sbjct: 31 TPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGTLPWRSGPVEICPSSPILENALVG 90
Query: 147 GSFQKDSTGK-QSALPTEQAPPS---DKRAGEEVVKRRKTSSAREESENPASGDEFFTLS 202
+TG S T+ + AG+ V ++ NP S + S
Sbjct: 91 QYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVP----EPNPVSIADS-EAS 145
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCL 262
P L V+I ++A G HTL LS ++W WG G QLGL + V P +
Sbjct: 146 PLL-----AVRILQLACGEEHTLALSISREIWAWGTG--CQLGLITTAFPVTKPQKV--- 195
Query: 263 EHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
EH AGR V ++ACG HS +
Sbjct: 196 EHL--------------------AGR-VVLQVACGAFHSLALV 217
Score = 38.5 bits (88), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P V G ++ + AGG H+L L+ QV+ WG GQLG VP
Sbjct: 542 GDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTVP 601
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V +T +G L+ S +VW WG G EGQLG G + + P + CL+
Sbjct: 507 VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLD 557
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 26/246 (10%)
Query: 66 TSESGKLITWGSAD----DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTE 121
+E G ++T G D G+S L E +P +P VV+A AG H V +++
Sbjct: 31 NTEPGLVLTLGQGDVGQLGLGESVL------ERKKPALVPLLQDVVQAEAGGMHTVCLSQ 84
Query: 122 AGEVYTWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRR 180
+G+VY++G C + RD GS Q + A S A E +
Sbjct: 85 SGQVYSFG---CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVF 141
Query: 181 KTSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYG 239
S R+ + + ++ P V L+ + KVA+G H ++L++ G ++ G G
Sbjct: 142 LWGSFRDNNGVIGLLEPMKKSMVPVQVQLD--APVVKVASGNDHLVMLTNDGDLYTLGCG 199
Query: 240 GEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGR 299
+GQLG P L G R L+ R + S G GR ++ CG
Sbjct: 200 EQGQLG--------RVPELFAN-RGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAY 250
Query: 300 HSAVVT 305
+ ++
Sbjct: 251 FTFAIS 256
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + +A VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---- 264
GV++ V +G H+L+++ G++W WG +GQLG G K V P LI L H
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEALSHEAIV 203
Query: 265 -AASGKDRPL-LVRQGSVNSSGK 285
AA G++ L L GSV + G+
Sbjct: 204 LAACGRNHTLALTDTGSVFAFGE 226
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R E GD +P L+ I A G HTL L+D G V+ +G GQLG
Sbjct: 174 RNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLG 233
Query: 246 LGSRIKMVPTPHLI 259
LG++ VP+P I
Sbjct: 234 LGNQTDAVPSPAQI 247
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P V + VA G HTL+L +V+ WG+GG G+LG + +MVP
Sbjct: 326 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 371
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 88/253 (34%), Gaps = 59/253 (23%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +++GQ K E P + ++V AA
Sbjct: 149 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEALSHEAIVLAAC 207
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +++T+ G V+ FG Q + A+P
Sbjct: 208 GRNHTLALTDTGSVFA---------------FGENKMGQLGLGNQTDAVP---------- 242
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
SP + N G ITK+A G ++++ G
Sbjct: 243 ------------------------------SPAQIMYN-GQPITKMACGAEFSMLMDCKG 271
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
++ +G GQLG S K + I + + + + + V
Sbjct: 272 NLYSFGCPEYGQLGHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVVV 330
Query: 292 KEIACGGRHSAVV 304
+++ACG H+ V+
Sbjct: 331 RDVACGANHTLVL 343
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 211 GVKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH---- 264
GV++ V +G H+L+++ G++W WG +GQLG G K V P LI L H
Sbjct: 147 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD-TKRVEAPRLIEGLSHEVIV 205
Query: 265 -AASGKDRPL-LVRQGSVNSSGK 285
AA G++ L L GSV + G+
Sbjct: 206 SAACGRNHTLALTETGSVFAFGE 228
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P V + VA G HTL+L +V+ WG+GG G+LG + +MVP
Sbjct: 328 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 373
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%)
Query: 186 REESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
R E GD +P L+ I A G HTL L++ G V+ +G GQLG
Sbjct: 176 RNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLG 235
Query: 246 LGSRIKMVPTPHLI 259
LG++ VP+P I
Sbjct: 236 LGNQTDAVPSPAQI 249
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 87/253 (34%), Gaps = 59/253 (23%)
Query: 53 KDVCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAA 111
+ V G C +L + GKL +WG +++GQ K E P + +V AA
Sbjct: 151 RTVVSGSCAAHSLLITTEGKLWSWGR-NEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 209
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKR 171
G H +++TE G V+ FG Q + A+P
Sbjct: 210 GRNHTLALTETGSVFA---------------FGENKMGQLGLGNQTDAVP---------- 244
Query: 172 AGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMG 231
SP + N G ITK+A G ++I+ G
Sbjct: 245 ------------------------------SPAQIMYN-GQPITKMACGAEFSMIMDCKG 273
Query: 232 QVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYV 291
++ +G GQLG S K + I + + + + + V
Sbjct: 274 NLYSFGCPEYGQLGHNSDGKFIARAQRIE-YDCELVPRRVAIFIEKTKDGQILPVPNVVV 332
Query: 292 KEIACGGRHSAVV 304
+++ACG H+ V+
Sbjct: 333 RDVACGANHTLVL 345
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 92/229 (40%), Gaps = 47/229 (20%)
Query: 88 SGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWG---WR----ECVPSAKVT 140
+G TPE P +V++AA G H V +TE GEVY++G W+ E PS+ +
Sbjct: 25 AGSFSLTPERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPSSPLL 84
Query: 141 RDFGSAGSFQKDSTGK-QSALPTEQAPPS---DKRAGEEVVKRRKTSSAREESENPASGD 196
+TG S TE + AG+ V ++ E S S
Sbjct: 85 ESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQY--VPEPSPVSISDS 142
Query: 197 EFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTP 256
E SP L V+I ++A G HTL LS ++W WG G QLGL + V P
Sbjct: 143 E---TSPSL-----AVRILQLACGEEHTLALSLSREIWAWGTG--CQLGLITTTFPVTKP 192
Query: 257 HLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ EH AGR V ++ACG HS +
Sbjct: 193 QKV---EHL--------------------AGR-VVLQVACGAFHSLALV 217
Score = 38.5 bits (88), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVP 254
GD L P V G ++ + AGG H+L L+ QV+ WG GQLG VP
Sbjct: 536 GDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVP 595
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLE 263
V +T +G L+ S +VW WG G EGQLG G + + P + CL+
Sbjct: 501 VVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRL-QPLCVKCLD 551
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 98/237 (41%), Gaps = 26/237 (10%)
Query: 67 SESGKLITWGSAD----DEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEA 122
+E G ++T G D G+S L E +P +P VV+A AG H V + ++
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVL------ERKKPALVPLLQDVVQAEAGGMHTVCLNQS 85
Query: 123 GEVYTWGWRECVPSAKVTRDFGSAGS-FQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRK 181
G+VY++G C + RD GS Q + A S A E +
Sbjct: 86 GQVYSFG---CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 182 TSSAREESENPASGDEF-FTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGG 240
S R+ + + ++ P V L+ + + KVA+G H ++L+ G ++ G G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQLD--MPVVKVASGNDHLVMLTTDGDLYTLGCGE 200
Query: 241 EGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACG 297
+GQLG P L G +R L+ + + S G GR ++ CG
Sbjct: 201 QGQLG--------RVPELFAN-RGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCG 248
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G++ WGS D ++ P + + VVK A+G H V +T G+
Sbjct: 133 ALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
>sp|Q17551|RPM1_CAEEL E3 ubiquitin-protein ligase rpm-1 OS=Caenorhabditis elegans
GN=rpm-1 PE=1 SV=1
Length = 3766
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 200 TLSPCLVTLNPG---VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
TL P V L+ G VK++ V+ G HT++L+ +V+ +G GQLG+G + K P
Sbjct: 752 TLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQ 811
Query: 256 PHLIP---CLEHAASGKDRPLL-VRQGSVNSSGKAGR 288
++P + A+G + +L GSV + G G+
Sbjct: 812 QVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGK 848
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 195 GDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
GD +P V L I +VAAG HT++ ++ G V+ +G G+GQL
Sbjct: 802 GDTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLA 852
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 56 CGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAH 115
CG LA+ ++ T+GS + GQ + TP+ LP++ +V+ AAG H
Sbjct: 774 CGNFHTVLLASDR--RVFTFGS-NCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGSNH 830
Query: 116 CVSVTEAGEVYTWG 129
+ G V+T+G
Sbjct: 831 TILRANDGSVFTFG 844
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 81/229 (35%), Gaps = 57/229 (24%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGET--------PEPFPLPTEASVVKAAAGWAH 115
A S + WG + GQ LT G +GE P P + + + AAG H
Sbjct: 264 FAIDHSHNVYAWG-LNQYGQCALT-GDNGELEDGSVLMKPTLIPELSHKGIKEIAAGEHH 321
Query: 116 CVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEE 175
+++TE G+VY WG + K+ +P ++ P S +
Sbjct: 322 TLALTEDGQVYAWGRYDM----------------------KEIGIPKDKLPKSTFKI--- 356
Query: 176 VVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWG 235
N + F L VKI + G H+ +++ G V+
Sbjct: 357 ---------------NTGTHGSFSFLQNLF-----AVKIKTIGVGSHHSFAVTEDGVVYA 396
Query: 236 WGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSG 284
WG+ GLG I V P I + A +D L+ G + SG
Sbjct: 397 WGFAETYGPGLGPSIDDVEKPTRI--VNTATKNEDILLIGAGGQFSVSG 443
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWG 237
G KI A GG HTL L ++W WG
Sbjct: 64 GTKIVDFAVGGMHTLALDGKNRIWSWG 90
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 107 VKAAAGWAHCVSVTEAGEVYTWGWRE--CVPSAKVTRDFGSAGSFQK----DSTGKQSAL 160
++A AG H +T GEVY G E VP+ V ++ GS F K + K+ +
Sbjct: 188 LQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKE-GSTDEFAKVKFEEDIEKEGKI 246
Query: 161 PTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTL--SPCLVTLNPGVKITKVA 218
A S A + + R + N + +P ++ KI K+A
Sbjct: 247 VMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIA 306
Query: 219 AGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHL 258
AG H ++L + G + +G G GQLG SR K + + ++
Sbjct: 307 AGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYM 346
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
Query: 55 VCGGGCGFALATSESGKLITWGSA-DDEGQSYLTSGKHGETPEPFPLPTEAS--VVKAAA 111
+ G F A ++ G +I WG+ + G + H P + +A +VK AA
Sbjct: 248 MLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAA 307
Query: 112 GWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALP 161
G H V + E G + T+G E + +R + D +G +P
Sbjct: 308 GENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLLVP 357
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 42.7 bits (99), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 202 SPCLVTL---NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
SP LV P +++ +A GG+H+L L+ G+V+ WG QLGLG+
Sbjct: 230 SPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
Score = 39.3 bits (90), Expect = 0.034, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR-IKMVPTPHLIPCLE------H 264
+KI K++ G + +++D G ++ +G G G+LGLG + + M TP L+ L+
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDM 397
Query: 265 AASGKDRPLLVRQGSVNSSGK 285
++ G +L +G V S G+
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGR 418
Score = 38.1 bits (87), Expect = 0.087, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+P LV G I +++GG H+L+L++ G V+ +G +GQLG+G
Sbjct: 382 TPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIG 427
Score = 34.7 bits (78), Expect = 0.92, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 212 VKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+ I KV+AGG H++ +SD + WG G LG
Sbjct: 453 INIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 95/264 (35%), Gaps = 46/264 (17%)
Query: 49 GDSWKDVCGGGCGFALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVK 108
D+ K + G A A +E GKL WG + EGQ L E +P E +V K
Sbjct: 139 ADTIKQLSAGANTSA-ALTEDGKLFMWGD-NSEGQIGL------EDKSNVCIPHEVTVGK 190
Query: 109 ----AAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPT-E 163
+ G+ H VT GE+YT+G E G + Q L E
Sbjct: 191 PISWISCGYYHSAFVTMDGELYTFGEPE-------NGKLGLPNELLMNHRSPQRVLGIPE 243
Query: 164 QAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFF---TLSPCLVTLNPGVKITKVAAG 220
+ G VV K A + G F T P ++ KI ++ G
Sbjct: 244 RVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCG 303
Query: 221 GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSV 280
HT +++++G ++ +G G G+LGLG T P L
Sbjct: 304 ENHTALMTELGLLYTFGDGRHGKLGLGME---NFTNQFFPTL------------------ 342
Query: 281 NSSGKAGRSYVKEIACGGRHSAVV 304
R V+ IACGG H V
Sbjct: 343 --CSNFLRFAVQLIACGGCHMLVF 364
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 25/95 (26%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
++ +VA GG HT++L++ V+ +G G GQLGLG+ + P +I + KD+
Sbjct: 244 RVIQVACGGGHTVVLTE-KVVYAFGLGQFGQLGLGTFLFETSEPKIIERI------KDQK 296
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTDM 307
+ I+CG H+A++T++
Sbjct: 297 IC------------------HISCGENHTALMTEL 313
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 204 CLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
C+ L P K+ A G HTL+ +D G V+ G EGQLGLG
Sbjct: 80 CIKALKPE-KVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLG 122
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 27/101 (26%)
Query: 205 LVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH 264
+V P I +++AG + L++ G+++ WG EGQ+GL + + C+ H
Sbjct: 133 IVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNV--------CIPH 184
Query: 265 AASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
+ GK + I+CG HSA VT
Sbjct: 185 EV---------------TVGKP----ISWISCGYYHSAFVT 206
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 65/184 (35%), Gaps = 50/184 (27%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S G + WG+++ + +T P P V + A G C + G
Sbjct: 293 LALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEG 352
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG+ G K ++A+P E PP+
Sbjct: 353 HVFVWGY----------------GILGKGPKLLETAIP-EMIPPT--------------- 380
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
F L+ NP V+++++ G H L++ G+++ WG G
Sbjct: 381 --------------LFGLT----EFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGC 422
Query: 244 LGLG 247
LG+G
Sbjct: 423 LGIG 426
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
++ +V G H+L L+D G+V+ G+G +GQ GLG
Sbjct: 228 QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLG 262
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 19/94 (20%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRP 272
K+ +VA GG +L+ G V+ WGY G LG G ++ P +IP P
Sbjct: 334 KVKQVACGGTGCAVLNAEGHVFVWGY---GILGKGPKLLETAIPEMIP-----------P 379
Query: 273 LLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
L N + V +I CG H A +T+
Sbjct: 380 TLFGLTEFNPEVQ-----VSQIRCGLSHFAALTN 408
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 101/292 (34%), Gaps = 60/292 (20%)
Query: 39 LSPIPARLCGGDSWKDVCGGGCGFALATSESGKLI-TWG-------------SADDEGQS 84
+ P+P RL D G GF L +S++ + WG S D+ +
Sbjct: 93 IQPVPYRL-ELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRG 151
Query: 85 YLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFG 144
Y + P P P E V++ + G AH + +T+ V++ G G
Sbjct: 152 YEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMG----------NNSHG 201
Query: 145 SAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG---DEFFTL 201
G + + + D + + V + + ++ E + G D L
Sbjct: 202 QCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGL 261
Query: 202 SPCLVTLNP--------GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
+T P GV + +VA G L LS G V+GWG QL + V
Sbjct: 262 GHYNITSTPSKLGGDLAGVTVVQVATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQV 321
Query: 254 PTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
P CL + GK VK++ACGG AV+
Sbjct: 322 NVPR---CLPFSGVGK---------------------VKQVACGGTGCAVLN 349
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 34/118 (28%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILS---DMGQVWGWGYGGEGQLGL---------GS 248
+ P L KI+ A G TL+ S D+ +VWG G + QLG G
Sbjct: 93 IQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGY 152
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ P+P +P DRP + V +++CG HS V+TD
Sbjct: 153 EYVLEPSPVPLPL--------DRP--------------QETKVLQVSCGRAHSLVLTD 188
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 50/184 (27%)
Query: 64 LATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAG 123
LA S G L WG+++ + +T P V +AA G C + G
Sbjct: 296 LAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEG 355
Query: 124 EVYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTS 183
V+ WG+ G K +SA+P E PP+
Sbjct: 356 HVFVWGY----------------GILGKGPNLVESAVP-EMIPPT--------------- 383
Query: 184 SAREESENPASGDEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQ 243
F L+ NP ++++++ G H L++ G+++ WG G
Sbjct: 384 --------------LFGLTE----FNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGC 425
Query: 244 LGLG 247
LG+G
Sbjct: 426 LGIG 429
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
++ +VA G H+L L+D G+V+ G+G +GQ GLG
Sbjct: 231 QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLG 265
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 34/118 (28%)
Query: 201 LSPCLVTLNPGVKITKVAAGGRHTLILS---DMGQVWGWGYGGEGQLGL---------GS 248
+ P L KI+ A G TL+ S D+ +VWG G + QLG G
Sbjct: 96 IQPVPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGY 155
Query: 249 RIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
+ P+P +P DRP R V +++CG HS V+TD
Sbjct: 156 EYVLEPSPVSLPL--------DRPQETR--------------VLQVSCGRAHSLVLTD 191
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG-SRIKMVP 254
P V VA G HTL+L +V+ WG+GG G+LG + +MVP
Sbjct: 301 PNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 346
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 55 VCGGGCG-FALATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGW 113
V G C +L + GKL +WG +D+GQ K E P+ E +V AA G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGR-NDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGR 184
Query: 114 AHCVSVTEAGEVYTWG 129
H +++TE G VYT+G
Sbjct: 185 NHTLALTENGTVYTFG 200
Score = 38.5 bits (88), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 212 VKITKVAAG--GRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEH----- 264
V+++ V +G H+LI++ G++W WG +GQLG G K + P LI L
Sbjct: 121 VQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGD-TKRLEAPKLIEGLGEEVIVA 179
Query: 265 AASGKDRPL-LVRQGSVNSSGKAGRSYVKEIACGGRHSAVVT 305
AA G++ L L G+V + G+ + + ++ G + AV++
Sbjct: 180 AACGRNHTLALTENGTVYTFGE---NKLGQLGQGNQTDAVLS 218
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
I A G HTL L++ G V+ +G GQLG G++ V +P I
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATI 222
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI 259
LSP + N G I KVA G ++I+ G ++ +G GQLG S K + I
Sbjct: 216 VLSPATIQYN-GQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRI 274
Query: 260 PCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVV 304
+ + + + + +++ACG H+ V+
Sbjct: 275 E-FDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVL 318
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 95/265 (35%), Gaps = 77/265 (29%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T+P+K + GG + VC G FA+ T E +L TW G
Sbjct: 331 VYVWGG-GKTTPQKLDVFK-------GGWRARQVCAGDAHFAVVTVEK-ELYTWVNMQGG 381
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEA--SVVKAAAGWAHCVSVTEAGEVYTWGWRECVP 135
+ GQ L G +P + SV K + G V +T+ G++Y++G
Sbjct: 382 SKLHGQ--LGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFG------ 433
Query: 136 SAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASG 195
+ +G G Q AG EV
Sbjct: 434 ----SDYYGCLGVNQS--------------------AGSEV------------------- 450
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
L P LV + +V+ G H + L+ V+ WG G G+LGL S V +
Sbjct: 451 -----LEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSE-DDVYS 504
Query: 256 PHLIP-----CLEHAASGKDRPLLV 275
P + C+ + G D L+
Sbjct: 505 PQKVEVQRGLCIVNVCCGSDGSFLL 529
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
P +V G ++ +VA G H L LS +++ WG G G+LGLG+R
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTR 480
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 202 SPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+PC V G+K+ VA G T+ + +V+ WG G G+LG
Sbjct: 603 APCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG 646
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 67/231 (29%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K ++ G S + VC G FA+ T E +L TW G
Sbjct: 349 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 399
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
GQ P+ ++ + + G V VT+ G++Y +G
Sbjct: 400 TKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFG-------- 451
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
+ +G G DK AG EV++ + +
Sbjct: 452 --SDYYGCMGV--------------------DKVAGPEVLEPMQLN-------------- 475
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
FF +P + +V+ G H ++L+ +V+ WG G G+LGL S
Sbjct: 476 FFLSNP----------VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDS 516
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G ++ +V+ G T+ +D ++ WG GG G R+ M PT P +
Sbjct: 649 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNG------RLAMTPTER--PHGSDICTSWP 700
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
RP+ GS++ +V +++C G H+ ++ +
Sbjct: 701 RPIF---GSLH--------HVPDLSCRGWHTILIVE 725
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 29/125 (23%)
Query: 210 PGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLI----PCLEHA 265
PG + +A G H L+LS GQ+ WG GQ G+G + + H + P +E
Sbjct: 774 PGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFR-IANLHQVDGDWPAIEKI 832
Query: 266 ASGK-DRPLLVRQGSV--------NSSGKAGRSY---------------VKEIACGGRHS 301
A G+ + GS+ G GR+ V +IACG H+
Sbjct: 833 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHT 892
Query: 302 AVVTD 306
V+TD
Sbjct: 893 VVLTD 897
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 213 KITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMV 253
K+T++A G HT++L+D G+V G G GQ+G+ IK V
Sbjct: 881 KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKV 921
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSR 249
G K V+ G HT+ +D G V+ WG GQ G+ ++
Sbjct: 1073 GAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTK 1111
>sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens
GN=MYCBP2 PE=1 SV=3
Length = 4640
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
D ++ S LVT G +T+VA G HT +L G+VW +G +GQ G
Sbjct: 627 DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 200 TLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
T P V + ++ +V+ G H+++L + G V+ +GYG GQLG G
Sbjct: 890 TYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 937
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 203 PCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
P LV PG T+V AG HT +L GQV+ +G +GQLG
Sbjct: 945 PTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 99/259 (38%), Gaps = 52/259 (20%)
Query: 66 TSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEV 125
++E G ++T G D GQ L E +P + VV+A AG H V ++++G+V
Sbjct: 31 STEPGLVLTLGQGD-VGQLGLGENVM-ERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQV 88
Query: 126 YTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSA 185
Y++G C + RD GS + P E+VV+ S
Sbjct: 89 YSFG---CNDEGALGRDTSVEGS---------------EMVPGKVELQEKVVQVSAGDSH 130
Query: 186 REESENPASGDEFF-------------------TLSPCLVTLNPGVKITKVAAGGRHTLI 226
+ G F ++ P V L+ V + KVA+G H ++
Sbjct: 131 TAALTD--DGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLD--VPVVKVASGNDHLVM 186
Query: 227 LSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSSGKA 286
L+ G ++ G G +GQLG P L G +R L+ + + S G
Sbjct: 187 LTADGDLYTLGCGEQGQLG--------RVPELFAN-RGGRQGLERLLVPKCVMLKSRGSR 237
Query: 287 GRSYVKEIACGGRHSAVVT 305
G ++ CG + ++
Sbjct: 238 GHVRFQDAFCGAYFTFAIS 256
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A ++ G++ WGS D ++ P + + VVK A+G H V +T G+
Sbjct: 133 ALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGD 192
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQ 150
+YT G E +V F + G Q
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQ 218
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium
discoideum GN=gefC PE=2 SV=1
Length = 1457
Score = 38.9 bits (89), Expect = 0.045, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 82/263 (31%), Gaps = 64/263 (24%)
Query: 65 ATSESGKLITWGSADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGE 124
A +E G+L WG ++ G+ L TP V A H TE+G+
Sbjct: 428 ALTEWGELYMWG-INEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGK 486
Query: 125 VYTWGWRECVPSAKVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSS 184
+Y WG Q D TGK A+P+ P + +K
Sbjct: 487 MYVWG--------------------QSDETGKIQAIPS---PLPIHSYLDREIKSPNGGG 523
Query: 185 AREESENPASGDEFFTLSPCLVTLN----------PGVKIT-----------KVAAGGRH 223
+ C+ L PG+ I + G H
Sbjct: 524 VGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPGIPIPLRNALENHSVRNIVMGNFH 583
Query: 224 TLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKDRPLLVRQGSVNSS 283
+ L+D G+V G GQLG ++ P +V+Q S +
Sbjct: 584 LVCLTDSGEVVTIGRNKTGQLG-------------------RTDAENEPGIVKQLSFDPD 624
Query: 284 GKAGRSYVKEIACGGRHSAVVTD 306
G +V IA G HS + +
Sbjct: 625 GLNSDEFVVSIAAGEFHSVALVE 647
Score = 38.5 bits (88), Expect = 0.074, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 209 NPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLG 245
+P I +VA G H ++L++ G VW WG GQLG
Sbjct: 330 SPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 33.5 bits (75), Expect = 2.0, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 214 ITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRI-KMVPT 255
+ +A G ++T L++ G+++ WG G+LGLG I + PT
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPT 458
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 86/231 (37%), Gaps = 67/231 (29%)
Query: 22 VYMWGYLPGTSPEKSPILSPIPARLCGGDSWKDVCGGGCGFALATSESGKLITW----GS 77
VY+WG T P+K ++ G S + VC G FA+ T E +L TW G
Sbjct: 349 VYVWGGGKST-PQKLDVIK-------SGCSARQVCAGNTHFAVVTVEK-ELYTWVNMQGG 399
Query: 78 ADDEGQSYLTSGKHGETPEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSA 137
GQ P+ ++ + + G V VT+ G++Y +G
Sbjct: 400 TKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFG-------- 451
Query: 138 KVTRDFGSAGSFQKDSTGKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDE 197
+ +G G DK +G EV++ + +
Sbjct: 452 --SDYYGCMGV--------------------DKVSGPEVLEPMQLN-------------- 475
Query: 198 FFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGS 248
FF +P + +V+ G H ++L+ +V+ WG G G+LGL S
Sbjct: 476 FFLSNP----------VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDS 516
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 19/96 (19%)
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPTPHLIPCLEHAASGKD 270
G ++ +V+ G T+ +D ++ WG GG G R+ M PT P +
Sbjct: 649 GKQVIRVSCGDEFTIAATDDNHIFAWGNGGNG------RLAMTPTER--PHGSDICTSWP 700
Query: 271 RPLLVRQGSVNSSGKAGRSYVKEIACGGRHSAVVTD 306
RP+ GS++ +V +++C G H+ ++ +
Sbjct: 701 RPIF---GSLH--------HVPDLSCRGWHTILIVE 725
>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster
GN=hiw PE=1 SV=2
Length = 5233
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 166 PPSDKRAGEE----VVKRRK-------TSSAREESENPASGDE----FFTLSPCLVTLNP 210
PPSD + ++ ++ RRK T +A + P D+ L+P L+ L
Sbjct: 905 PPSDVQQRQQRSKTLIMRRKERKGELETGAAGGGAATPTDLDKDPPRVAPLAPQLLQLTS 964
Query: 211 GVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLG 247
+ +VA G HT++L+ G+V+ +G GQLG G
Sbjct: 965 SSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSG 1001
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 62/164 (37%), Gaps = 59/164 (35%)
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P+ L + + VV+ A G H V +T AGEVYT FGS Q S
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYT---------------FGSNQYGQLGSG 1001
Query: 155 GKQSALPTEQAPPSDKRAGEEVVKRRKTSSAREESENPASGDEFFTLSPCLVTLNPGVKI 214
Q P SG P V + PG I
Sbjct: 1002 DLQ----------------------------------PVSG-------PVRVQV-PGA-I 1018
Query: 215 TKVAAGGRHTLILSDMGQVWGWGYGGEGQLG-LGSRIKMVPTPH 257
++VAAG HT++L+ G V+ +G +GQLG L S + P P
Sbjct: 1019 SQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPPQ 1062
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 107/277 (38%), Gaps = 37/277 (13%)
Query: 37 PILSPIPARLCGGDSWKDVCGGGCGF--ALATSESGKLITWGSADDEGQSYLTSGKHGET 94
P ++P+ +L S V CG + + +G++ T+GS + GQ L SG
Sbjct: 950 PRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGS-NQYGQ--LGSGDLQPV 1006
Query: 95 PEPFPLPTEASVVKAAAGWAHCVSVTEAGEVYTWGWRECVPSAKVTRDFGSAGSFQKDST 154
P + ++ + AAG H V +T G VYT+G + ++ D+G Q D +
Sbjct: 1007 SGPVRVQVPGAISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYGLKPPPQDDDS 1066
Query: 155 -------GKQSALPT-----------EQAPPSDKRAG-EEVVKRRKTSSAREESENPASG 195
G PT Q+P + + +G +E+ + R++ S
Sbjct: 1067 PVGAGSDGGAGGSPTVAPVGMPGPERSQSPANVQPSGSKEMPPLLPVLTQRQKFLWNCSP 1126
Query: 196 DEFFTLSPCLVTLNPGVKITKVAAGGRHTLILSDMGQVWGWGYGGEGQLGLGSRIKMVPT 255
F L PC G K+T + A G T I D + + I ++P+
Sbjct: 1127 GAVFGLGPCY-----GKKVTWIGANGDQTFIKIDESLITAQMLPKMHVVANKKTILLIPS 1181
Query: 256 PHLIPCLEHAASGKDRPLLVRQGSVNSSGKAGRSYVK 292
IP H S + R GS + + ++VK
Sbjct: 1182 ---IPLSFHTLS-----INRRDGSCTAHYRGQTNFVK 1210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,937,870
Number of Sequences: 539616
Number of extensions: 6036288
Number of successful extensions: 11089
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 10383
Number of HSP's gapped (non-prelim): 559
length of query: 313
length of database: 191,569,459
effective HSP length: 117
effective length of query: 196
effective length of database: 128,434,387
effective search space: 25173139852
effective search space used: 25173139852
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)