Query 021368
Match_columns 313
No_of_seqs 174 out of 2190
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 03:08:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uem_A Protein disulfide-isome 100.0 1.2E-41 4.1E-46 307.4 28.9 267 1-270 87-358 (361)
2 3f8u_A Protein disulfide-isome 100.0 3.8E-34 1.3E-38 267.8 28.2 262 4-273 190-465 (481)
3 2b5e_A Protein disulfide-isome 100.0 1.6E-34 5.4E-39 271.9 20.4 266 2-274 189-472 (504)
4 3idv_A Protein disulfide-isome 100.0 4.6E-33 1.6E-37 237.0 20.8 219 31-271 14-239 (241)
5 3apo_A DNAJ homolog subfamily 100.0 2.7E-32 9.3E-37 269.2 23.7 239 2-269 410-656 (780)
6 3apo_A DNAJ homolog subfamily 100.0 2.1E-31 7.1E-36 262.9 20.0 235 7-269 519-767 (780)
7 1a8l_A Protein disulfide oxido 100.0 2.3E-28 7.9E-33 206.0 13.5 195 51-268 24-225 (226)
8 2ywm_A Glutaredoxin-like prote 99.9 2.4E-27 8.3E-32 200.3 13.1 190 49-269 20-220 (229)
9 2hls_A Protein disulfide oxido 99.9 6.6E-25 2.3E-29 186.8 17.5 197 50-277 26-234 (243)
10 3us3_A Calsequestrin-1; calciu 99.9 1.2E-23 4.2E-28 189.7 18.9 210 31-273 12-231 (367)
11 1sji_A Calsequestrin 2, calseq 99.9 1.5E-23 5.1E-28 188.1 17.5 209 32-274 11-230 (350)
12 2r2j_A Thioredoxin domain-cont 99.9 9.6E-23 3.3E-27 184.9 17.5 207 32-271 5-220 (382)
13 3ed3_A Protein disulfide-isome 99.9 7.2E-22 2.5E-26 172.9 19.8 210 30-268 15-266 (298)
14 3f8u_A Protein disulfide-isome 99.9 5.8E-21 2E-25 178.4 18.0 214 33-277 2-225 (481)
15 3h79_A Thioredoxin-like protei 99.8 3.2E-20 1.1E-24 141.8 12.5 108 159-267 14-126 (127)
16 3uem_A Protein disulfide-isome 99.8 1.6E-19 5.4E-24 162.5 18.9 214 25-272 10-233 (361)
17 2djk_A PDI, protein disulfide- 99.8 4.6E-20 1.6E-24 142.2 10.8 127 29-158 3-131 (133)
18 2b5e_A Protein disulfide-isome 99.8 3.9E-19 1.3E-23 167.0 18.8 201 31-270 13-221 (504)
19 1sji_A Calsequestrin 2, calseq 99.8 8.3E-19 2.8E-23 157.2 19.7 236 6-271 98-348 (350)
20 3q6o_A Sulfhydryl oxidase 1; p 99.8 1.4E-18 4.9E-23 147.8 19.7 219 31-270 11-241 (244)
21 2dj3_A Protein disulfide-isome 99.8 2.5E-19 8.7E-24 137.8 12.7 113 158-271 5-120 (133)
22 2djj_A PDI, protein disulfide- 99.8 6.2E-19 2.1E-23 133.2 12.9 115 155-271 2-119 (121)
23 3t58_A Sulfhydryl oxidase 1; o 99.8 6.5E-18 2.2E-22 157.9 20.9 222 31-272 11-243 (519)
24 3zzx_A Thioredoxin; oxidoreduc 99.8 5.2E-19 1.8E-23 130.4 9.6 98 163-267 3-104 (105)
25 3ga4_A Dolichyl-diphosphooligo 99.8 1.2E-18 4.3E-23 139.2 12.3 121 160-280 18-164 (178)
26 3us3_A Calsequestrin-1; calciu 99.8 5.4E-18 1.8E-22 152.8 16.2 239 6-273 100-352 (367)
27 2trx_A Thioredoxin; electron t 99.8 4.2E-18 1.4E-22 125.9 11.0 104 160-268 2-107 (108)
28 2voc_A Thioredoxin; electron t 99.8 7.4E-18 2.5E-22 125.7 11.8 103 162-271 3-107 (112)
29 3gnj_A Thioredoxin domain prot 99.8 2E-18 6.7E-23 128.3 8.7 104 160-268 4-109 (111)
30 4f9z_D Endoplasmic reticulum r 99.8 3.3E-17 1.1E-21 137.8 16.4 202 35-269 12-225 (227)
31 2i4a_A Thioredoxin; acidophIle 99.7 1.2E-17 4.2E-22 123.0 11.7 104 160-268 2-107 (107)
32 2qsi_A Putative hydrogenase ex 99.7 2.2E-18 7.7E-23 131.3 7.8 104 160-268 15-122 (137)
33 2o8v_B Thioredoxin 1; disulfid 99.7 9.9E-18 3.4E-22 128.2 11.4 104 160-268 22-127 (128)
34 2dj1_A Protein disulfide-isome 99.7 9.1E-18 3.1E-22 130.2 10.8 110 158-272 15-127 (140)
35 1x5d_A Protein disulfide-isome 99.7 8.7E-18 3E-22 129.0 10.0 108 159-269 6-117 (133)
36 3uvt_A Thioredoxin domain-cont 99.7 1.1E-17 3.7E-22 124.2 10.0 103 160-267 5-110 (111)
37 2dml_A Protein disulfide-isome 99.7 1.5E-17 5.3E-22 127.2 10.8 106 159-268 16-123 (130)
38 1mek_A Protein disulfide isome 99.7 1.8E-17 6.3E-22 124.6 11.0 110 160-271 7-119 (120)
39 2av4_A Thioredoxin-like protei 99.7 9.6E-18 3.3E-22 129.8 9.3 105 162-268 23-138 (160)
40 1t00_A Thioredoxin, TRX; redox 99.7 1.5E-17 5.2E-22 123.8 10.1 105 160-269 5-111 (112)
41 1w4v_A Thioredoxin, mitochondr 99.7 8.2E-18 2.8E-22 126.9 8.4 107 157-268 10-118 (119)
42 3die_A Thioredoxin, TRX; elect 99.7 1.8E-17 6.1E-22 122.0 9.9 101 161-268 4-106 (106)
43 2dbc_A PDCL2, unnamed protein 99.7 3.9E-17 1.3E-21 126.0 12.2 109 159-274 9-126 (135)
44 3evi_A Phosducin-like protein 99.7 2.1E-17 7.2E-22 124.1 10.3 103 160-269 3-114 (118)
45 3tco_A Thioredoxin (TRXA-1); d 99.7 2.7E-17 9.2E-22 121.5 10.6 103 160-268 4-108 (109)
46 1thx_A Thioredoxin, thioredoxi 99.7 2.4E-17 8.3E-22 123.1 10.4 105 160-269 7-113 (115)
47 2l5l_A Thioredoxin; structural 99.7 3.7E-17 1.3E-21 126.3 11.5 108 159-272 8-129 (136)
48 3hz4_A Thioredoxin; NYSGXRC, P 99.7 9.7E-18 3.3E-22 130.3 8.2 107 159-270 5-113 (140)
49 1dby_A Chloroplast thioredoxin 99.7 2.1E-17 7.2E-22 121.9 9.4 102 162-268 3-106 (107)
50 1x5e_A Thioredoxin domain cont 99.7 3.8E-17 1.3E-21 124.4 11.0 108 159-274 6-115 (126)
51 3dxb_A Thioredoxin N-terminall 99.7 5.4E-17 1.8E-21 136.1 12.7 111 156-271 8-120 (222)
52 1fb6_A Thioredoxin M; electron 99.7 3.5E-17 1.2E-21 120.1 10.2 102 162-268 2-105 (105)
53 1oaz_A Thioredoxin 1; immune s 99.7 2E-17 7E-22 125.5 9.2 105 160-269 3-123 (123)
54 2yzu_A Thioredoxin; redox prot 99.7 3.4E-17 1.2E-21 120.9 10.0 104 161-270 2-107 (109)
55 2ppt_A Thioredoxin-2; thiredox 99.7 2.3E-17 7.7E-22 130.5 9.5 106 159-270 46-153 (155)
56 2i1u_A Thioredoxin, TRX, MPT46 99.7 2.7E-17 9.2E-22 124.1 9.5 106 159-269 11-118 (121)
57 1nsw_A Thioredoxin, TRX; therm 99.7 3.9E-17 1.3E-21 120.0 10.0 101 162-268 2-104 (105)
58 3hxs_A Thioredoxin, TRXP; elec 99.7 4E-17 1.4E-21 126.7 10.5 107 158-269 20-139 (141)
59 2qgv_A Hydrogenase-1 operon pr 99.7 3.7E-18 1.3E-22 130.6 4.3 102 161-268 18-124 (140)
60 3p2a_A Thioredoxin 2, putative 99.7 3.8E-17 1.3E-21 128.1 9.9 105 159-269 37-143 (148)
61 3aps_A DNAJ homolog subfamily 99.7 2.3E-17 7.9E-22 124.8 8.2 105 160-269 3-113 (122)
62 3ed3_A Protein disulfide-isome 99.7 8.3E-17 2.8E-21 140.7 12.6 115 159-275 16-148 (298)
63 3qfa_C Thioredoxin; protein-pr 99.7 2.3E-17 7.9E-22 123.9 7.5 102 160-268 12-116 (116)
64 2pu9_C TRX-F, thioredoxin F-ty 99.7 9.5E-17 3.3E-21 119.3 10.3 103 159-268 4-110 (111)
65 4f9z_D Endoplasmic reticulum r 99.7 1E-16 3.4E-21 134.9 10.9 142 1-144 79-227 (227)
66 2e0q_A Thioredoxin; electron t 99.7 7.5E-17 2.6E-21 117.9 8.8 101 162-269 1-103 (104)
67 4euy_A Uncharacterized protein 99.7 4.2E-17 1.4E-21 120.1 7.4 96 166-268 7-104 (105)
68 1gh2_A Thioredoxin-like protei 99.7 1.2E-16 4.2E-21 117.9 9.9 101 162-269 3-107 (107)
69 3ec3_A Protein disulfide-isome 99.7 5E-16 1.7E-20 132.5 14.4 152 5-163 88-249 (250)
70 1xwb_A Thioredoxin; dimerizati 99.7 2.2E-16 7.5E-21 116.0 10.3 101 162-268 2-106 (106)
71 3qou_A Protein YBBN; thioredox 99.7 2.1E-16 7.3E-21 137.5 11.9 104 160-268 7-113 (287)
72 3bj5_A Protein disulfide-isome 99.7 4.6E-16 1.6E-20 121.4 11.6 133 24-157 6-142 (147)
73 3apq_A DNAJ homolog subfamily 99.7 1.6E-16 5.6E-21 131.9 9.3 109 159-273 96-206 (210)
74 1r26_A Thioredoxin; redox-acti 99.7 3.1E-16 1.1E-20 119.3 10.0 100 161-268 20-122 (125)
75 1v98_A Thioredoxin; oxidoreduc 99.7 1.9E-16 6.5E-21 122.8 8.9 104 160-269 33-138 (140)
76 2r2j_A Thioredoxin domain-cont 99.7 2.5E-15 8.6E-20 136.1 17.4 229 11-274 98-334 (382)
77 2vlu_A Thioredoxin, thioredoxi 99.7 2.5E-16 8.4E-21 119.1 9.1 104 159-269 12-120 (122)
78 2h8l_A Protein disulfide-isome 99.7 5.7E-16 1.9E-20 132.3 12.4 153 5-163 87-251 (252)
79 3f3q_A Thioredoxin-1; His TAG, 99.7 2.9E-16 1E-20 116.4 9.2 99 162-268 9-109 (109)
80 1ep7_A Thioredoxin CH1, H-type 99.7 1.9E-16 6.6E-21 117.6 8.1 103 161-269 3-111 (112)
81 3gix_A Thioredoxin-like protei 99.7 2.9E-16 1E-20 123.2 9.0 99 165-268 9-120 (149)
82 3d6i_A Monothiol glutaredoxin- 99.7 3.4E-16 1.2E-20 116.4 8.8 102 162-268 2-108 (112)
83 1faa_A Thioredoxin F; electron 99.7 7E-16 2.4E-20 116.9 10.5 103 159-268 17-123 (124)
84 2xc2_A Thioredoxinn; oxidoredu 99.7 3.8E-16 1.3E-20 117.2 8.9 100 161-268 14-117 (117)
85 1syr_A Thioredoxin; SGPP, stru 99.6 3.7E-16 1.2E-20 116.4 8.6 102 159-268 8-111 (112)
86 2vim_A Thioredoxin, TRX; thior 99.6 6.4E-16 2.2E-20 113.1 9.5 99 163-268 2-104 (104)
87 3h79_A Thioredoxin-like protei 99.6 9.2E-16 3.1E-20 116.9 10.5 106 30-140 13-126 (127)
88 3ul3_B Thioredoxin, thioredoxi 99.6 2.7E-16 9.2E-21 120.1 7.1 89 174-267 38-128 (128)
89 1xfl_A Thioredoxin H1; AT3G510 99.6 1E-15 3.5E-20 116.2 10.3 103 159-268 15-123 (124)
90 3m9j_A Thioredoxin; oxidoreduc 99.6 8.6E-16 2.9E-20 112.7 9.4 96 166-268 7-105 (105)
91 3q6o_A Sulfhydryl oxidase 1; p 99.6 1.6E-15 5.3E-20 128.9 12.0 112 159-271 11-129 (244)
92 2dj0_A Thioredoxin-related tra 99.6 7.1E-17 2.4E-21 124.8 3.3 103 159-265 6-117 (137)
93 1a0r_P Phosducin, MEKA, PP33; 99.6 1.8E-16 6.3E-21 133.8 5.9 134 135-272 88-229 (245)
94 2trc_P Phosducin, MEKA, PP33; 99.6 1E-16 3.5E-21 133.5 4.2 128 134-269 74-213 (217)
95 2wz9_A Glutaredoxin-3; protein 99.6 2.2E-15 7.6E-20 118.7 11.6 106 160-272 12-121 (153)
96 2oe3_A Thioredoxin-3; electron 99.6 5.1E-16 1.8E-20 116.1 7.4 100 160-266 12-113 (114)
97 2l6c_A Thioredoxin; oxidoreduc 99.6 8E-16 2.7E-20 114.2 7.5 101 162-270 5-107 (110)
98 3ga4_A Dolichyl-diphosphooligo 99.6 2.7E-15 9.1E-20 119.9 10.8 116 23-143 9-154 (178)
99 2j23_A Thioredoxin; immune pro 99.6 1.4E-15 4.9E-20 114.8 7.9 103 160-268 15-120 (121)
100 2es7_A Q8ZP25_salty, putative 99.6 5.1E-16 1.8E-20 120.5 5.5 105 161-272 18-128 (142)
101 1qgv_A Spliceosomal protein U5 99.6 3E-15 1E-19 116.4 9.7 101 166-268 10-120 (142)
102 3emx_A Thioredoxin; structural 99.6 3.3E-16 1.1E-20 120.8 4.2 103 159-271 15-128 (135)
103 2f51_A Thioredoxin; electron t 99.6 1.7E-15 5.8E-20 113.9 7.8 104 161-271 4-115 (118)
104 2yj7_A LPBCA thioredoxin; oxid 99.4 7.3E-17 2.5E-21 118.4 0.0 101 162-267 3-105 (106)
105 2c0g_A ERP29 homolog, windbeut 99.6 4.4E-15 1.5E-19 125.5 10.8 104 159-269 15-132 (248)
106 2l57_A Uncharacterized protein 99.6 2.2E-15 7.4E-20 114.6 7.9 91 176-271 24-119 (126)
107 2vm1_A Thioredoxin, thioredoxi 99.6 2.8E-15 9.6E-20 112.3 8.2 103 160-269 6-114 (118)
108 2dml_A Protein disulfide-isome 99.6 1.3E-14 4.6E-19 110.7 11.8 107 31-142 16-124 (130)
109 1ti3_A Thioredoxin H, PTTRXH1; 99.6 2.5E-15 8.5E-20 111.7 7.1 102 160-268 4-111 (113)
110 3d22_A TRXH4, thioredoxin H-ty 99.6 4.1E-15 1.4E-19 115.0 8.5 104 159-269 23-132 (139)
111 3idv_A Protein disulfide-isome 99.6 7.1E-15 2.4E-19 124.3 10.5 129 6-142 98-237 (241)
112 2dj1_A Protein disulfide-isome 99.6 1.3E-14 4.4E-19 112.3 10.8 107 32-145 17-127 (140)
113 1zma_A Bacterocin transport ac 99.6 2.3E-15 7.8E-20 113.1 6.1 97 161-265 13-117 (118)
114 3cxg_A Putative thioredoxin; m 99.6 2.4E-15 8.1E-20 115.6 6.3 104 159-270 19-130 (133)
115 2qc7_A ERP31, ERP28, endoplasm 99.6 1.8E-14 6.1E-19 121.3 12.0 103 160-268 5-118 (240)
116 2trx_A Thioredoxin; electron t 99.5 3.7E-14 1.3E-18 104.4 10.4 104 32-141 2-107 (108)
117 3tco_A Thioredoxin (TRXA-1); d 99.5 1.3E-14 4.4E-19 106.9 7.8 105 31-141 3-108 (109)
118 1thx_A Thioredoxin, thioredoxi 99.5 3.2E-14 1.1E-18 105.9 10.1 107 30-142 5-113 (115)
119 3gnj_A Thioredoxin domain prot 99.5 1.3E-14 4.5E-19 107.4 7.6 104 33-142 5-110 (111)
120 2qsi_A Putative hydrogenase ex 99.5 2.1E-14 7.2E-19 109.3 8.4 104 33-142 16-123 (137)
121 2c0g_A ERP29 homolog, windbeut 99.5 4.5E-14 1.6E-18 119.3 11.2 147 31-207 15-173 (248)
122 2voc_A Thioredoxin; electron t 99.5 2.9E-14 1E-18 106.0 9.0 102 34-142 3-105 (112)
123 3t58_A Sulfhydryl oxidase 1; o 99.5 6.1E-14 2.1E-18 131.1 13.1 114 159-272 11-130 (519)
124 3qcp_A QSOX from trypanosoma b 99.5 2.4E-15 8.3E-20 137.4 3.2 99 159-258 22-129 (470)
125 1x5d_A Protein disulfide-isome 99.5 4.1E-14 1.4E-18 108.3 9.7 107 31-143 6-118 (133)
126 3die_A Thioredoxin, TRX; elect 99.5 3.5E-14 1.2E-18 104.1 8.8 101 33-140 4-105 (106)
127 2dj3_A Protein disulfide-isome 99.5 5.5E-14 1.9E-18 107.7 10.2 110 30-144 5-120 (133)
128 3zzx_A Thioredoxin; oxidoreduc 99.5 2E-14 6.9E-19 105.6 7.3 94 39-140 8-104 (105)
129 2o8v_B Thioredoxin 1; disulfid 99.5 5.4E-14 1.9E-18 107.2 9.9 106 30-141 20-127 (128)
130 1mek_A Protein disulfide isome 99.5 5.3E-14 1.8E-18 105.4 9.5 106 32-142 7-117 (120)
131 1nsw_A Thioredoxin, TRX; therm 99.5 2.6E-14 8.8E-19 104.7 7.5 102 34-141 2-104 (105)
132 2djj_A PDI, protein disulfide- 99.5 1.4E-13 4.8E-18 103.5 11.6 104 31-142 6-117 (121)
133 2i4a_A Thioredoxin; acidophIle 99.5 7.8E-14 2.7E-18 102.4 9.6 103 32-140 2-106 (107)
134 3p2a_A Thioredoxin 2, putative 99.5 7.5E-14 2.6E-18 109.1 10.0 107 31-143 37-144 (148)
135 3hxs_A Thioredoxin, TRXP; elec 99.5 5.1E-14 1.7E-18 109.0 8.9 108 29-142 19-139 (141)
136 1x5e_A Thioredoxin domain cont 99.5 5.4E-14 1.8E-18 106.8 8.8 106 31-145 6-113 (126)
137 3hz4_A Thioredoxin; NYSGXRC, P 99.5 2.6E-14 9E-19 110.7 7.1 107 31-143 5-113 (140)
138 2yzu_A Thioredoxin; redox prot 99.5 3.2E-14 1.1E-18 104.7 7.3 104 33-142 2-106 (109)
139 2kuc_A Putative disulphide-iso 99.5 2.6E-14 8.9E-19 109.0 7.0 103 164-271 10-123 (130)
140 2h8l_A Protein disulfide-isome 99.5 8.9E-13 3E-17 112.4 16.6 209 30-272 4-233 (252)
141 1wmj_A Thioredoxin H-type; str 99.5 6.4E-15 2.2E-19 112.4 2.9 105 159-270 13-123 (130)
142 2e0q_A Thioredoxin; electron t 99.5 5.8E-14 2E-18 102.3 7.9 102 34-142 1-103 (104)
143 1oaz_A Thioredoxin 1; immune s 99.5 4.3E-14 1.5E-18 107.0 7.3 104 32-141 3-122 (123)
144 2qgv_A Hydrogenase-1 operon pr 99.5 1.4E-14 4.6E-19 110.8 4.5 104 33-142 18-125 (140)
145 2djk_A PDI, protein disulfide- 99.5 1.6E-13 5.5E-18 105.3 10.5 105 160-272 6-118 (133)
146 2ppt_A Thioredoxin-2; thiredox 99.5 5.7E-14 1.9E-18 110.8 8.0 106 31-142 46-152 (155)
147 1t00_A Thioredoxin, TRX; redox 99.5 1.2E-13 4E-18 102.5 9.2 107 30-142 3-111 (112)
148 4euy_A Uncharacterized protein 99.5 7.8E-14 2.7E-18 102.3 8.0 97 38-141 7-104 (105)
149 2av4_A Thioredoxin-like protei 99.5 5.2E-14 1.8E-18 108.9 7.2 107 34-145 23-142 (160)
150 3uvt_A Thioredoxin domain-cont 99.5 1.3E-13 4.5E-18 101.8 9.0 103 31-140 4-110 (111)
151 1fo5_A Thioredoxin; disulfide 99.5 2.2E-13 7.6E-18 95.6 9.5 81 179-268 3-85 (85)
152 1v98_A Thioredoxin; oxidoreduc 99.5 1.3E-13 4.6E-18 106.6 9.0 107 31-143 32-139 (140)
153 2l5l_A Thioredoxin; structural 99.5 1.1E-13 3.8E-18 106.5 8.5 107 31-143 8-127 (136)
154 1wou_A Thioredoxin -related pr 99.5 8.2E-14 2.8E-18 105.4 7.0 99 162-266 7-122 (123)
155 1w4v_A Thioredoxin, mitochondr 99.5 1.1E-13 3.7E-18 104.0 7.6 106 30-141 11-118 (119)
156 3aps_A DNAJ homolog subfamily 99.5 4.5E-14 1.6E-18 106.4 5.3 105 32-142 3-113 (122)
157 2fwh_A Thiol:disulfide interch 99.5 7.7E-14 2.6E-18 107.2 6.7 101 165-269 17-128 (134)
158 1dby_A Chloroplast thioredoxin 99.5 1.8E-13 6E-18 100.6 8.2 102 34-141 3-106 (107)
159 3qfa_C Thioredoxin; protein-pr 99.5 7.7E-14 2.6E-18 104.4 6.3 103 31-141 11-116 (116)
160 2i1u_A Thioredoxin, TRX, MPT46 99.5 1.3E-13 4.4E-18 103.7 7.5 109 28-142 8-118 (121)
161 1fb6_A Thioredoxin M; electron 99.5 2.3E-13 7.8E-18 99.5 8.5 102 34-141 2-105 (105)
162 2wz9_A Glutaredoxin-3; protein 99.5 1.3E-13 4.6E-18 108.4 7.7 128 30-175 10-141 (153)
163 3fk8_A Disulphide isomerase; A 99.4 1.2E-13 4.1E-18 105.9 7.0 87 176-267 27-131 (133)
164 1nho_A Probable thioredoxin; b 99.4 2.9E-13 9.9E-18 95.0 8.1 80 180-268 3-84 (85)
165 3qou_A Protein YBBN; thioredox 99.4 3.2E-13 1.1E-17 117.3 10.1 107 30-142 5-114 (287)
166 3f9u_A Putative exported cytoc 99.4 1.6E-13 5.4E-18 110.1 7.2 100 164-268 30-165 (172)
167 3apq_A DNAJ homolog subfamily 99.4 2.7E-13 9.3E-18 112.4 8.7 110 30-145 95-205 (210)
168 2qc7_A ERP31, ERP28, endoplasm 99.4 4.4E-13 1.5E-17 112.8 9.9 106 31-141 4-118 (240)
169 3dxb_A Thioredoxin N-terminall 99.4 4.7E-13 1.6E-17 111.9 10.0 110 30-145 10-121 (222)
170 2pu9_C TRX-F, thioredoxin F-ty 99.4 9E-13 3.1E-17 97.5 10.1 104 31-141 4-110 (111)
171 2l57_A Uncharacterized protein 99.4 7.3E-13 2.5E-17 100.4 9.8 105 33-142 5-117 (126)
172 1xwb_A Thioredoxin; dimerizati 99.4 3.9E-13 1.3E-17 98.4 7.8 100 34-140 2-105 (106)
173 1r26_A Thioredoxin; redox-acti 99.4 3.1E-13 1E-17 102.6 7.3 101 34-142 21-123 (125)
174 3dml_A Putative uncharacterize 99.4 4.8E-14 1.6E-18 104.5 2.7 86 177-268 17-109 (116)
175 3ul3_B Thioredoxin, thioredoxi 99.4 4E-13 1.4E-17 102.3 7.5 103 31-139 24-127 (128)
176 1ep7_A Thioredoxin CH1, H-type 99.4 3.5E-13 1.2E-17 99.8 6.9 103 33-142 3-111 (112)
177 1a8l_A Protein disulfide oxido 99.4 2.9E-13 9.8E-18 113.4 6.6 126 9-141 92-225 (226)
178 3f3q_A Thioredoxin-1; His TAG, 99.4 6.6E-13 2.3E-17 98.1 7.7 100 33-140 8-108 (109)
179 2es7_A Q8ZP25_salty, putative 99.4 3.2E-13 1.1E-17 104.7 6.1 103 33-142 18-125 (142)
180 1syr_A Thioredoxin; SGPP, stru 99.4 3.7E-13 1.3E-17 99.9 6.2 104 30-141 7-111 (112)
181 1gh2_A Thioredoxin-like protei 99.4 1.2E-12 4E-17 96.3 8.7 100 34-141 3-106 (107)
182 2vlu_A Thioredoxin, thioredoxi 99.4 6.1E-13 2.1E-17 100.2 7.3 105 30-142 11-120 (122)
183 3d6i_A Monothiol glutaredoxin- 99.4 1.4E-12 4.9E-17 96.6 9.2 102 34-142 2-109 (112)
184 2lst_A Thioredoxin; structural 99.1 3.4E-14 1.2E-18 108.5 0.0 89 176-269 17-116 (130)
185 3ec3_A Protein disulfide-isome 99.4 1.1E-11 3.9E-16 105.4 15.4 208 30-273 4-232 (250)
186 1faa_A Thioredoxin F; electron 99.4 2.4E-12 8.2E-17 97.2 9.5 106 29-141 15-123 (124)
187 2xc2_A Thioredoxinn; oxidoredu 99.4 1.4E-12 4.8E-17 97.5 7.9 101 32-141 13-117 (117)
188 2l6c_A Thioredoxin; oxidoreduc 99.4 1.1E-12 3.7E-17 97.1 7.0 101 34-142 5-106 (110)
189 2vim_A Thioredoxin, TRX; thior 99.4 1.3E-12 4.6E-17 95.1 7.4 99 35-141 2-104 (104)
190 2j23_A Thioredoxin; immune pro 99.4 1.3E-12 4.6E-17 98.3 7.4 104 31-141 14-120 (121)
191 3m9j_A Thioredoxin; oxidoreduc 99.3 1E-12 3.5E-17 96.0 6.1 96 38-141 7-105 (105)
192 2ywm_A Glutaredoxin-like prote 99.3 1.2E-12 4.1E-17 109.8 6.2 126 6-142 91-220 (229)
193 2dj0_A Thioredoxin-related tra 99.3 2.2E-13 7.5E-18 105.0 1.4 104 30-139 5-118 (137)
194 3gix_A Thioredoxin-like protei 99.3 1.8E-12 6.2E-17 101.4 6.0 101 38-143 10-122 (149)
195 2ju5_A Thioredoxin disulfide i 99.3 3.2E-12 1.1E-16 100.5 7.4 96 168-269 34-152 (154)
196 1xfl_A Thioredoxin H1; AT3G510 99.3 3.9E-12 1.3E-16 96.3 7.5 103 31-141 15-123 (124)
197 1qgv_A Spliceosomal protein U5 99.3 2.5E-12 8.7E-17 99.7 6.4 101 38-143 10-122 (142)
198 3emx_A Thioredoxin; structural 99.3 1.5E-12 5.3E-17 100.0 4.9 103 31-143 15-127 (135)
199 3iv4_A Putative oxidoreductase 99.3 2.4E-12 8.2E-17 94.1 5.1 97 161-264 7-111 (112)
200 2oe3_A Thioredoxin-3; electron 99.3 2.1E-12 7.3E-17 96.2 4.9 99 33-139 13-113 (114)
201 2b5x_A YKUV protein, TRXY; thi 99.3 1.9E-11 6.4E-16 94.8 10.1 101 163-269 15-145 (148)
202 1hyu_A AHPF, alkyl hydroperoxi 99.3 4.9E-11 1.7E-15 112.1 14.5 176 51-267 20-198 (521)
203 1ti3_A Thioredoxin H, PTTRXH1; 99.3 6.6E-12 2.3E-16 92.9 6.8 102 33-142 5-112 (113)
204 1lu4_A Soluble secreted antige 99.3 1.5E-11 5.2E-16 93.9 9.0 99 163-268 10-135 (136)
205 2yj7_A LPBCA thioredoxin; oxid 98.9 4.2E-13 1.4E-17 98.0 0.0 101 34-140 3-105 (106)
206 2vm1_A Thioredoxin, thioredoxi 99.3 1E-11 3.5E-16 92.6 7.0 103 32-142 6-114 (118)
207 1zma_A Bacterocin transport ac 99.2 1.8E-12 6.2E-17 97.1 2.7 103 31-138 11-117 (118)
208 3kp8_A Vkorc1/thioredoxin doma 99.2 2.6E-12 8.8E-17 94.4 3.4 74 178-267 12-93 (106)
209 1sen_A Thioredoxin-like protei 99.2 6.3E-12 2.2E-16 99.9 5.9 88 176-268 44-147 (164)
210 3or5_A Thiol:disulfide interch 99.2 2.1E-11 7.3E-16 96.4 8.9 104 161-269 18-151 (165)
211 3ph9_A Anterior gradient prote 99.2 2.2E-11 7.4E-16 95.1 8.7 95 169-268 32-144 (151)
212 1zzo_A RV1677; thioredoxin fol 99.2 2.9E-11 9.9E-16 92.2 9.3 101 162-269 10-135 (136)
213 1fo5_A Thioredoxin; disulfide 99.2 5.8E-11 2E-15 83.0 9.5 81 51-141 4-85 (85)
214 3cxg_A Putative thioredoxin; m 99.2 9.2E-12 3.2E-16 95.4 5.7 104 31-142 19-129 (133)
215 3evi_A Phosducin-like protein 99.2 1.5E-11 5.1E-16 92.0 6.6 99 32-140 3-112 (118)
216 3d22_A TRXH4, thioredoxin H-ty 99.2 1.3E-11 4.4E-16 95.1 6.2 103 33-143 25-133 (139)
217 3qcp_A QSOX from trypanosoma b 99.2 5.5E-12 1.9E-16 115.3 4.6 107 31-142 22-152 (470)
218 2f51_A Thioredoxin; electron t 99.2 1E-11 3.5E-16 93.1 5.1 103 32-142 3-113 (118)
219 2kuc_A Putative disulphide-iso 99.2 1.7E-11 5.9E-16 93.2 6.4 106 35-143 9-122 (130)
220 1ilo_A Conserved hypothetical 99.2 2.1E-11 7.2E-16 83.7 6.0 74 181-264 2-76 (77)
221 2f9s_A Thiol-disulfide oxidore 99.2 4.5E-11 1.5E-15 93.3 8.5 89 177-269 25-138 (151)
222 3erw_A Sporulation thiol-disul 99.2 4.6E-11 1.6E-15 92.2 8.3 84 177-264 33-144 (145)
223 3raz_A Thioredoxin-related pro 99.2 4.7E-11 1.6E-15 93.3 8.4 89 177-269 23-140 (151)
224 2dbc_A PDCL2, unnamed protein 99.2 9E-11 3.1E-15 90.1 9.6 100 31-140 9-119 (135)
225 2h30_A Thioredoxin, peptide me 99.2 3.4E-11 1.2E-15 95.2 7.2 105 161-270 22-157 (164)
226 1nho_A Probable thioredoxin; b 99.2 4.6E-11 1.6E-15 83.6 7.0 81 51-141 3-84 (85)
227 2lja_A Putative thiol-disulfid 99.2 7.9E-11 2.7E-15 91.9 8.5 90 177-270 29-144 (152)
228 1wou_A Thioredoxin -related pr 99.2 3.5E-11 1.2E-15 90.8 6.1 101 32-139 5-122 (123)
229 3ewl_A Uncharacterized conserv 99.2 1.1E-10 3.7E-15 90.0 8.9 86 177-268 26-140 (142)
230 1jfu_A Thiol:disulfide interch 99.2 1.3E-10 4.3E-15 94.1 9.6 137 129-270 12-181 (186)
231 1z6n_A Hypothetical protein PA 99.2 2.1E-11 7.3E-16 96.9 4.9 76 166-244 42-122 (167)
232 3ia1_A THIO-disulfide isomeras 99.2 7.8E-11 2.7E-15 92.1 8.0 85 179-270 31-145 (154)
233 2l5o_A Putative thioredoxin; s 99.1 1.8E-10 6.2E-15 89.9 9.8 89 177-269 27-141 (153)
234 3fkf_A Thiol-disulfide oxidore 99.1 2.6E-10 9E-15 88.2 9.8 86 177-269 32-146 (148)
235 4evm_A Thioredoxin family prot 99.1 1.4E-10 4.9E-15 88.3 8.1 86 177-267 21-137 (138)
236 3lor_A Thiol-disulfide isomera 99.1 1.9E-10 6.4E-15 90.5 9.0 89 177-269 29-155 (160)
237 3eyt_A Uncharacterized protein 99.1 1.6E-10 5.5E-15 90.7 8.3 89 177-269 27-152 (158)
238 3fk8_A Disulphide isomerase; A 99.1 7.9E-11 2.7E-15 89.9 6.3 93 47-141 27-132 (133)
239 1wmj_A Thioredoxin H-type; str 99.1 2.2E-11 7.5E-16 92.5 2.9 104 32-143 14-123 (130)
240 3gl3_A Putative thiol:disulfid 99.1 2.7E-10 9.4E-15 88.7 9.0 89 177-269 27-142 (152)
241 3eur_A Uncharacterized protein 99.1 3.9E-10 1.3E-14 87.0 9.5 84 177-266 30-142 (142)
242 2hls_A Protein disulfide oxido 99.1 2.1E-10 7.4E-15 97.0 8.5 124 9-143 96-227 (243)
243 2fwh_A Thiol:disulfide interch 99.1 1.1E-10 3.6E-15 89.5 5.7 100 39-141 19-127 (134)
244 3hcz_A Possible thiol-disulfid 99.1 1.5E-10 5.1E-15 89.6 6.5 88 177-268 30-145 (148)
245 3kcm_A Thioredoxin family prot 99.1 3.7E-10 1.3E-14 88.2 8.3 88 177-268 27-142 (154)
246 3hdc_A Thioredoxin family prot 99.1 5.4E-10 1.9E-14 87.9 8.8 89 177-269 40-152 (158)
247 2lst_A Thioredoxin; structural 98.6 1.7E-11 5.8E-16 93.3 0.0 102 40-144 10-118 (130)
248 2fgx_A Putative thioredoxin; N 99.1 1.2E-10 4.1E-15 85.0 4.5 75 180-264 30-106 (107)
249 3ha9_A Uncharacterized thiored 99.0 7.6E-10 2.6E-14 87.6 9.5 86 177-269 36-164 (165)
250 1un2_A DSBA, thiol-disulfide i 99.0 2.1E-11 7.1E-16 99.8 0.0 115 95-223 40-159 (197)
251 2trc_P Phosducin, MEKA, PP33; 99.0 8.6E-11 2.9E-15 97.6 3.6 102 31-140 98-211 (217)
252 3lwa_A Secreted thiol-disulfid 99.0 3.8E-10 1.3E-14 91.0 7.2 88 177-268 58-180 (183)
253 2b1k_A Thiol:disulfide interch 99.0 2.1E-10 7.3E-15 91.1 5.5 100 161-268 32-159 (168)
254 1ttz_A Conserved hypothetical 99.0 1.9E-10 6.4E-15 81.0 4.5 73 182-269 3-77 (87)
255 2lrn_A Thiol:disulfide interch 99.0 9.3E-10 3.2E-14 85.9 8.7 86 177-269 28-141 (152)
256 1a0r_P Phosducin, MEKA, PP33; 99.0 3.9E-10 1.4E-14 95.0 6.0 102 31-140 111-224 (245)
257 3ira_A Conserved protein; meth 99.0 4.3E-10 1.5E-14 89.6 5.7 76 167-245 29-118 (173)
258 2hyx_A Protein DIPZ; thioredox 99.0 6.2E-10 2.1E-14 98.9 7.3 88 177-268 81-198 (352)
259 2b5x_A YKUV protein, TRXY; thi 99.0 2.5E-09 8.7E-14 82.5 9.6 105 36-142 16-145 (148)
260 3iv4_A Putative oxidoreductase 99.0 1.5E-10 5E-15 84.6 2.0 99 35-137 9-111 (112)
261 2dlx_A UBX domain-containing p 99.0 1.5E-09 5.2E-14 84.7 7.7 95 168-268 29-135 (153)
262 1kng_A Thiol:disulfide interch 99.0 6.1E-10 2.1E-14 87.1 5.4 93 168-268 33-151 (156)
263 1zzo_A RV1677; thioredoxin fol 98.9 4.6E-09 1.6E-13 79.8 9.9 102 37-142 13-135 (136)
264 3s9f_A Tryparedoxin; thioredox 98.9 2.3E-09 8E-14 85.0 8.4 65 177-241 47-137 (165)
265 1lu4_A Soluble secreted antige 98.9 5.8E-09 2E-13 79.3 10.1 90 48-141 23-135 (136)
266 2lrt_A Uncharacterized protein 98.9 1.8E-09 6.2E-14 84.4 7.2 84 177-264 34-143 (152)
267 1o8x_A Tryparedoxin, TRYX, TXN 98.9 3.1E-09 1.1E-13 82.2 8.0 68 177-244 27-122 (146)
268 1i5g_A Tryparedoxin II; electr 98.9 3.4E-09 1.1E-13 81.8 8.1 82 162-244 13-122 (144)
269 2ju5_A Thioredoxin disulfide i 98.9 3.5E-09 1.2E-13 83.0 8.0 92 48-142 46-152 (154)
270 2ywi_A Hypothetical conserved 98.9 1.7E-09 5.9E-14 88.0 6.4 91 177-269 44-174 (196)
271 3fw2_A Thiol-disulfide oxidore 98.9 9.1E-09 3.1E-13 79.9 9.8 85 177-268 32-147 (150)
272 1o73_A Tryparedoxin; electron 98.9 3.7E-09 1.3E-13 81.5 7.5 68 177-244 27-122 (144)
273 3kp8_A Vkorc1/thioredoxin doma 98.9 1.4E-09 4.6E-14 79.7 4.4 75 51-139 14-92 (106)
274 3f9u_A Putative exported cytoc 98.9 3.6E-09 1.2E-13 84.4 7.2 102 36-142 30-166 (172)
275 2cvb_A Probable thiol-disulfid 98.9 7.8E-09 2.7E-13 83.6 8.7 91 177-269 32-159 (188)
276 3or5_A Thiol:disulfide interch 98.9 1.9E-08 6.4E-13 79.3 10.7 91 48-143 33-152 (165)
277 4fo5_A Thioredoxin-like protei 98.8 8.6E-09 2.9E-13 79.4 8.0 84 177-266 31-142 (143)
278 3erw_A Sporulation thiol-disul 98.8 1.2E-08 4E-13 78.4 8.7 88 48-138 33-145 (145)
279 3kh7_A Thiol:disulfide interch 98.8 3.7E-09 1.3E-13 84.8 5.7 84 177-268 57-166 (176)
280 2k6v_A Putative cytochrome C o 98.8 3.7E-09 1.3E-13 84.0 5.5 89 177-268 34-172 (172)
281 2lja_A Putative thiol-disulfid 98.8 3.3E-08 1.1E-12 76.7 10.9 94 48-143 29-144 (152)
282 1ilo_A Conserved hypothetical 98.8 2.1E-08 7.1E-13 68.4 8.2 72 53-137 3-76 (77)
283 3u5r_E Uncharacterized protein 98.8 1.9E-08 6.5E-13 83.5 9.5 87 178-269 58-187 (218)
284 2l5o_A Putative thioredoxin; s 98.8 4.7E-08 1.6E-12 75.9 11.0 97 48-146 27-145 (153)
285 3raz_A Thioredoxin-related pro 98.8 4.3E-08 1.5E-12 76.2 10.7 96 48-145 23-143 (151)
286 2f9s_A Thiol-disulfide oxidore 98.8 2.7E-08 9.4E-13 77.2 9.6 96 48-145 25-141 (151)
287 2ls5_A Uncharacterized protein 98.3 6.4E-10 2.2E-14 87.4 0.0 87 177-267 32-146 (159)
288 3hcz_A Possible thiol-disulfid 98.7 4.3E-08 1.5E-12 75.5 9.3 89 48-141 30-145 (148)
289 2rli_A SCO2 protein homolog, m 98.7 1.9E-08 6.3E-13 79.9 7.4 89 177-268 25-163 (171)
290 1sen_A Thioredoxin-like protei 98.7 2.4E-09 8.1E-14 84.9 1.9 98 42-142 39-148 (164)
291 2ggt_A SCO1 protein homolog, m 98.7 2.2E-08 7.4E-13 78.8 7.1 89 177-268 22-160 (164)
292 4evm_A Thioredoxin family prot 98.7 6.7E-08 2.3E-12 73.1 9.5 91 48-140 21-137 (138)
293 3dwv_A Glutathione peroxidase- 98.7 5.8E-08 2E-12 78.5 9.5 89 177-269 45-183 (187)
294 3kp9_A Vkorc1/thioredoxin doma 98.7 3E-09 1E-13 91.5 1.8 72 180-267 199-278 (291)
295 2e7p_A Glutaredoxin; thioredox 98.7 2.1E-09 7.2E-14 79.9 0.5 79 178-268 19-107 (116)
296 3cmi_A Peroxiredoxin HYR1; thi 98.7 2.3E-08 7.8E-13 79.6 6.6 88 177-269 31-168 (171)
297 2h30_A Thioredoxin, peptide me 98.7 1.4E-08 4.7E-13 80.0 5.1 108 33-142 22-156 (164)
298 3dml_A Putative uncharacterize 98.7 1.5E-08 5.1E-13 74.8 4.9 86 50-142 19-110 (116)
299 2lus_A Thioredoxion; CR-Trp16, 98.1 1.9E-09 6.5E-14 82.9 0.0 69 177-245 24-122 (143)
300 3fkf_A Thiol-disulfide oxidore 98.7 1.9E-07 6.5E-12 71.8 11.3 90 48-142 32-146 (148)
301 1wjk_A C330018D20RIK protein; 98.7 1.9E-08 6.6E-13 72.7 5.0 78 178-269 15-96 (100)
302 3ha9_A Uncharacterized thiored 98.7 1.3E-07 4.3E-12 74.6 9.9 91 48-143 36-165 (165)
303 3drn_A Peroxiredoxin, bacterio 98.7 6.7E-08 2.3E-12 76.1 8.3 87 177-267 27-147 (161)
304 3gl3_A Putative thiol:disulfid 98.7 1.8E-07 6.2E-12 72.5 10.5 94 48-143 27-143 (152)
305 2p5q_A Glutathione peroxidase 98.6 5.3E-08 1.8E-12 77.0 7.4 89 177-269 31-168 (170)
306 2v1m_A Glutathione peroxidase; 98.6 2.5E-08 8.6E-13 78.9 5.3 88 177-268 30-166 (169)
307 2vup_A Glutathione peroxidase- 98.6 3.9E-08 1.3E-12 79.7 6.4 89 177-269 47-185 (190)
308 2lrn_A Thiol:disulfide interch 98.6 2.5E-07 8.6E-12 71.8 10.8 93 48-145 28-144 (152)
309 3lor_A Thiol-disulfide isomera 98.6 1.4E-07 4.7E-12 73.8 9.3 93 48-142 29-155 (160)
310 2p31_A CL683, glutathione pero 98.6 3.4E-08 1.2E-12 79.4 5.8 88 177-268 48-180 (181)
311 3ia1_A THIO-disulfide isomeras 98.6 7.8E-08 2.7E-12 74.8 7.7 90 50-143 31-145 (154)
312 2obi_A PHGPX, GPX-4, phospholi 98.6 9.4E-08 3.2E-12 76.9 7.5 87 177-267 46-182 (183)
313 1we0_A Alkyl hydroperoxide red 98.6 7.5E-08 2.6E-12 77.8 6.4 88 177-268 30-156 (187)
314 2bmx_A Alkyl hydroperoxidase C 98.6 1.3E-07 4.3E-12 77.0 7.5 89 177-269 44-170 (195)
315 1kng_A Thiol:disulfide interch 98.6 1.3E-07 4.5E-12 73.6 7.2 91 48-142 41-152 (156)
316 3eyt_A Uncharacterized protein 98.6 2.8E-07 9.4E-12 72.0 8.9 94 48-143 27-153 (158)
317 1zof_A Alkyl hydroperoxide-red 98.5 8.2E-08 2.8E-12 78.3 6.0 88 177-268 32-160 (198)
318 2f8a_A Glutathione peroxidase 98.5 1.4E-07 4.8E-12 77.6 7.4 44 177-221 46-89 (208)
319 3kcm_A Thioredoxin family prot 98.5 3.5E-07 1.2E-11 71.0 9.1 94 48-143 27-144 (154)
320 2fgx_A Putative thioredoxin; N 98.5 1.4E-07 4.8E-12 68.6 6.2 76 51-137 30-106 (107)
321 3lwa_A Secreted thiol-disulfid 98.5 4.2E-07 1.5E-11 72.9 9.6 91 48-142 58-181 (183)
322 2k8s_A Thioredoxin; dimer, str 98.5 1.8E-08 6E-13 69.6 0.9 59 181-243 3-64 (80)
323 1xvw_A Hypothetical protein RV 98.5 1.9E-07 6.6E-12 73.1 7.1 86 178-267 35-158 (160)
324 1ttz_A Conserved hypothetical 98.5 1.3E-07 4.5E-12 66.3 5.0 74 53-142 3-77 (87)
325 3kij_A Probable glutathione pe 98.5 1.8E-07 6.3E-12 75.0 6.4 45 177-222 37-81 (180)
326 1ego_A Glutaredoxin; electron 98.5 1E-07 3.5E-12 66.3 3.9 74 181-268 2-83 (85)
327 2b1k_A Thiol:disulfide interch 98.5 3.5E-07 1.2E-11 72.3 7.5 90 48-142 50-160 (168)
328 3fw2_A Thiol-disulfide oxidore 98.5 1.9E-06 6.6E-11 66.6 11.3 90 48-142 32-148 (150)
329 1nm3_A Protein HI0572; hybrid, 98.5 8.2E-07 2.8E-11 74.7 9.8 55 49-103 33-92 (241)
330 2ywi_A Hypothetical conserved 98.4 7.1E-07 2.4E-11 72.3 9.1 93 51-145 48-177 (196)
331 3ira_A Conserved protein; meth 98.4 1.2E-07 4.1E-12 75.4 3.8 89 25-118 13-115 (173)
332 2cvb_A Probable thiol-disulfid 98.4 1.4E-06 4.7E-11 70.2 9.9 95 49-145 33-162 (188)
333 1z6n_A Hypothetical protein PA 98.4 2.1E-07 7.3E-12 73.7 4.7 96 37-140 41-141 (167)
334 3hdc_A Thioredoxin family prot 98.4 1.4E-06 4.9E-11 68.0 9.5 90 48-139 40-149 (158)
335 1xzo_A BSSCO, hypothetical pro 98.4 1.2E-06 4E-11 69.5 9.1 90 177-269 32-172 (174)
336 3kp9_A Vkorc1/thioredoxin doma 98.4 1.7E-07 5.9E-12 80.5 4.2 75 51-139 199-277 (291)
337 2gs3_A PHGPX, GPX-4, phospholi 98.4 5.5E-07 1.9E-11 72.5 7.0 44 177-221 48-91 (185)
338 2lrt_A Uncharacterized protein 98.4 1.8E-06 6E-11 67.1 9.4 87 49-137 35-143 (152)
339 1qmv_A Human thioredoxin perox 98.4 7E-07 2.4E-11 72.7 7.2 88 177-268 33-162 (197)
340 2l4c_A Endoplasmic reticulum r 98.4 1.6E-06 5.6E-11 64.9 8.6 98 160-268 21-123 (124)
341 3kh7_A Thiol:disulfide interch 98.3 1.6E-06 5.4E-11 69.2 8.7 90 48-142 57-167 (176)
342 3ewl_A Uncharacterized conserv 98.3 1.2E-06 4E-11 67.0 7.4 89 48-141 26-140 (142)
343 1jfu_A Thiol:disulfide interch 98.3 2.2E-06 7.6E-11 68.8 9.4 94 48-143 59-181 (186)
344 2dlx_A UBX domain-containing p 98.3 1.9E-06 6.6E-11 67.0 8.4 91 48-142 41-136 (153)
345 2h01_A 2-Cys peroxiredoxin; th 98.3 1.1E-06 3.9E-11 71.1 6.8 88 177-268 30-158 (192)
346 2hyx_A Protein DIPZ; thioredox 98.3 1.5E-06 5.1E-11 77.2 8.1 93 48-142 81-199 (352)
347 3ph9_A Anterior gradient prote 98.3 8.1E-07 2.8E-11 69.0 5.5 77 46-127 41-120 (151)
348 1zye_A Thioredoxin-dependent p 98.3 1.6E-06 5.4E-11 71.9 7.5 87 178-268 56-184 (220)
349 3u5r_E Uncharacterized protein 98.3 5.4E-06 1.8E-10 68.5 10.6 92 52-145 62-190 (218)
350 1uul_A Tryparedoxin peroxidase 98.3 1.4E-06 4.9E-11 71.1 6.9 88 177-268 35-164 (202)
351 1i5g_A Tryparedoxin II; electr 98.3 2E-06 6.9E-11 65.9 7.2 66 48-115 27-116 (144)
352 1o8x_A Tryparedoxin, TRYX, TXN 98.2 2.9E-06 9.8E-11 65.3 7.6 66 48-115 27-116 (146)
353 2i81_A 2-Cys peroxiredoxin; st 98.2 2.3E-06 8E-11 70.5 6.7 88 177-268 51-179 (213)
354 1eej_A Thiol:disulfide interch 98.2 1.4E-06 4.7E-11 72.1 5.3 79 177-267 85-209 (216)
355 3eur_A Uncharacterized protein 98.2 5.3E-06 1.8E-10 63.4 7.9 85 49-138 31-141 (142)
356 2b7k_A SCO1 protein; metalloch 98.2 1.7E-06 5.9E-11 70.5 5.4 45 177-221 40-87 (200)
357 2rli_A SCO2 protein homolog, m 98.2 1.4E-05 4.8E-10 62.9 10.6 92 49-142 26-164 (171)
358 2ggt_A SCO1 protein homolog, m 98.2 7.5E-06 2.6E-10 64.0 8.8 93 48-142 22-161 (164)
359 3s9f_A Tryparedoxin; thioredox 98.2 5.6E-06 1.9E-10 65.2 8.0 68 48-117 47-138 (165)
360 3ztl_A Thioredoxin peroxidase; 98.2 5.1E-06 1.8E-10 68.9 8.0 87 177-267 68-196 (222)
361 1hyu_A AHPF, alkyl hydroperoxi 98.2 3.7E-06 1.3E-10 78.9 7.9 122 7-140 73-198 (521)
362 1o73_A Tryparedoxin; electron 98.1 4.2E-06 1.4E-10 64.0 6.7 66 48-115 27-116 (144)
363 3gyk_A 27KDA outer membrane pr 98.1 3.7E-06 1.3E-10 66.8 6.6 81 177-268 21-172 (175)
364 2jsy_A Probable thiol peroxida 98.1 7E-06 2.4E-10 64.6 8.1 85 177-267 43-165 (167)
365 3cmi_A Peroxiredoxin HYR1; thi 98.1 1.2E-05 4E-10 63.6 9.0 92 48-142 31-168 (171)
366 1h75_A Glutaredoxin-like prote 98.1 1.3E-06 4.6E-11 60.0 2.8 70 182-268 3-77 (81)
367 1t3b_A Thiol:disulfide interch 98.1 3.5E-06 1.2E-10 69.4 5.7 79 177-267 85-209 (211)
368 3gkn_A Bacterioferritin comigr 98.1 5.8E-06 2E-10 64.8 6.7 88 177-268 34-161 (163)
369 2vup_A Glutathione peroxidase- 98.0 1.8E-05 6.3E-10 63.7 9.0 93 48-142 47-185 (190)
370 2p5q_A Glutathione peroxidase 98.0 1.8E-05 6.3E-10 62.1 8.6 93 48-142 31-168 (170)
371 2cq9_A GLRX2 protein, glutared 98.0 1.7E-06 5.7E-11 65.6 2.2 85 168-268 18-114 (130)
372 1xvq_A Thiol peroxidase; thior 98.0 2.8E-05 9.6E-10 61.8 9.5 86 177-269 43-168 (175)
373 2v1m_A Glutathione peroxidase; 98.0 5.6E-05 1.9E-09 59.2 10.6 96 48-143 30-168 (169)
374 2c0d_A Thioredoxin peroxidase 98.0 2.4E-05 8.2E-10 64.8 8.7 88 177-268 55-183 (221)
375 1r7h_A NRDH-redoxin; thioredox 98.0 1.4E-05 4.6E-10 53.8 5.9 67 182-265 3-74 (75)
376 4fo5_A Thioredoxin-like protei 98.0 1.8E-05 6.1E-10 60.4 7.3 87 48-139 31-142 (143)
377 3dwv_A Glutathione peroxidase- 97.9 3.2E-05 1.1E-09 62.1 8.6 94 48-143 45-184 (187)
378 3drn_A Peroxiredoxin, bacterio 97.9 3.6E-05 1.2E-09 60.2 8.7 90 49-140 28-147 (161)
379 2k6v_A Putative cytochrome C o 97.9 1.2E-05 4E-10 63.4 5.8 90 48-140 34-171 (172)
380 2k8s_A Thioredoxin; dimer, str 97.9 5.4E-06 1.9E-10 56.8 3.0 58 52-113 3-61 (80)
381 2l4c_A Endoplasmic reticulum r 97.9 1.6E-05 5.5E-10 59.4 5.7 93 35-140 24-122 (124)
382 2bmx_A Alkyl hydroperoxidase C 97.9 3.6E-05 1.2E-09 62.2 8.1 93 49-143 45-171 (195)
383 2ls5_A Uncharacterized protein 97.1 1.6E-06 5.6E-11 67.6 0.0 92 48-142 32-148 (159)
384 2a4v_A Peroxiredoxin DOT5; yea 97.9 3.6E-05 1.2E-09 60.0 7.7 41 179-221 36-77 (159)
385 2hze_A Glutaredoxin-1; thiored 97.9 1.5E-06 5E-11 64.2 -0.4 80 179-268 18-109 (114)
386 1v58_A Thiol:disulfide interch 97.9 2.3E-05 8E-10 65.8 6.6 85 177-268 96-232 (241)
387 1kte_A Thioltransferase; redox 97.8 3.8E-06 1.3E-10 60.8 1.3 77 181-267 13-101 (105)
388 2p31_A CL683, glutathione pero 97.8 4.1E-05 1.4E-09 61.1 7.3 92 48-141 48-180 (181)
389 3h93_A Thiol:disulfide interch 97.8 1.6E-05 5.4E-10 64.2 4.5 42 177-220 24-65 (192)
390 3bj5_A Protein disulfide-isome 97.8 0.00017 5.9E-09 55.5 10.2 110 160-274 14-132 (147)
391 1wjk_A C330018D20RIK protein; 97.8 1.2E-05 4.1E-10 57.8 3.3 79 51-142 17-96 (100)
392 1we0_A Alkyl hydroperoxide red 97.8 7.8E-05 2.7E-09 59.8 8.0 92 49-142 31-157 (187)
393 2lus_A Thioredoxion; CR-Trp16, 97.0 3.5E-06 1.2E-10 64.3 0.0 66 51-118 28-119 (143)
394 1zof_A Alkyl hydroperoxide-red 97.7 3.5E-05 1.2E-09 62.5 5.5 91 49-141 33-160 (198)
395 1xvw_A Hypothetical protein RV 97.7 0.00012 4.1E-09 56.9 8.4 87 51-139 38-157 (160)
396 3ixr_A Bacterioferritin comigr 97.7 4.6E-05 1.6E-09 60.8 6.0 87 177-267 50-176 (179)
397 2i3y_A Epididymal secretory gl 97.7 4.9E-05 1.7E-09 62.6 6.2 43 177-221 55-97 (215)
398 3kij_A Probable glutathione pe 97.7 0.00016 5.4E-09 57.5 9.0 95 48-142 37-170 (180)
399 3me7_A Putative uncharacterize 97.7 0.00016 5.4E-09 57.1 8.8 90 178-270 28-163 (170)
400 2lqo_A Putative glutaredoxin R 97.7 9.3E-05 3.2E-09 52.1 6.6 75 181-271 5-86 (92)
401 2obi_A PHGPX, GPX-4, phospholi 97.7 0.00016 5.5E-09 57.7 8.8 93 48-140 46-182 (183)
402 2f8a_A Glutathione peroxidase 97.7 0.00013 4.6E-09 59.6 8.0 42 48-89 46-89 (208)
403 3a2v_A Probable peroxiredoxin; 97.6 5.2E-05 1.8E-09 63.8 5.3 88 177-268 32-161 (249)
404 4g2e_A Peroxiredoxin; redox pr 97.6 4E-05 1.4E-09 59.8 4.1 45 177-222 29-74 (157)
405 2e7p_A Glutaredoxin; thioredox 97.6 8.4E-06 2.9E-10 60.0 0.2 80 52-140 21-106 (116)
406 2gs3_A PHGPX, GPX-4, phospholi 97.6 0.00019 6.4E-09 57.4 8.2 42 48-89 48-91 (185)
407 1n8j_A AHPC, alkyl hydroperoxi 97.6 0.00013 4.5E-09 58.5 7.2 88 177-268 29-155 (186)
408 2klx_A Glutaredoxin; thioredox 97.6 6.8E-05 2.3E-09 52.3 4.8 54 181-244 7-65 (89)
409 1ego_A Glutaredoxin; electron 97.6 4.4E-05 1.5E-09 52.6 3.7 77 53-141 3-83 (85)
410 2r37_A Glutathione peroxidase 97.6 8.2E-05 2.8E-09 60.9 5.8 43 177-221 37-79 (207)
411 2ht9_A Glutaredoxin-2; thiored 97.5 1.2E-05 4E-10 62.1 -0.1 87 168-267 40-135 (146)
412 1qmv_A Human thioredoxin perox 97.5 0.00021 7.1E-09 57.8 7.4 92 48-141 33-162 (197)
413 2znm_A Thiol:disulfide interch 97.5 0.00028 9.4E-09 56.9 7.9 42 177-220 21-62 (195)
414 1q98_A Thiol peroxidase, TPX; 97.5 0.00015 5.2E-09 56.8 6.2 43 177-222 42-85 (165)
415 3qpm_A Peroxiredoxin; oxidored 97.5 0.00043 1.5E-08 57.9 9.1 88 177-267 76-204 (240)
416 1fov_A Glutaredoxin 3, GRX3; a 97.5 0.00014 4.8E-09 49.6 5.1 66 182-266 3-74 (82)
417 1xzo_A BSSCO, hypothetical pro 97.5 0.00035 1.2E-08 54.9 7.8 93 48-142 32-172 (174)
418 4hde_A SCO1/SENC family lipopr 97.5 0.00061 2.1E-08 53.7 9.1 45 177-221 31-77 (170)
419 3qmx_A Glutaredoxin A, glutare 97.5 0.00015 5.2E-09 51.8 5.0 57 178-244 14-77 (99)
420 1zye_A Thioredoxin-dependent p 97.5 0.00049 1.7E-08 56.7 8.8 92 49-142 56-185 (220)
421 1uul_A Tryparedoxin peroxidase 97.4 0.00027 9.1E-09 57.4 6.7 91 49-141 36-164 (202)
422 3nzn_A Glutaredoxin; structura 97.4 0.0002 6.8E-09 51.5 5.0 71 178-264 20-101 (103)
423 2ec4_A FAS-associated factor 1 97.4 0.0033 1.1E-07 49.8 12.4 98 168-267 38-166 (178)
424 3ic4_A Glutaredoxin (GRX-1); s 97.4 0.00012 4E-09 51.3 3.6 68 181-265 13-91 (92)
425 4gqc_A Thiol peroxidase, perox 97.3 5.8E-05 2E-09 59.3 1.8 91 176-268 31-159 (164)
426 3gyk_A 27KDA outer membrane pr 97.3 0.00044 1.5E-08 54.6 6.9 83 51-142 24-173 (175)
427 3hd5_A Thiol:disulfide interch 97.3 0.00025 8.4E-09 57.2 5.4 43 177-221 24-66 (195)
428 2jsy_A Probable thiol peroxida 97.3 0.0012 4E-08 51.6 9.2 93 48-141 43-166 (167)
429 2wfc_A Peroxiredoxin 5, PRDX5; 97.3 0.00021 7E-09 56.3 4.7 45 177-222 30-77 (167)
430 2yan_A Glutaredoxin-3; oxidore 97.3 0.00021 7.3E-09 51.5 4.4 63 169-244 9-82 (105)
431 2h01_A 2-Cys peroxiredoxin; th 97.3 0.00062 2.1E-08 54.7 7.5 92 48-141 30-158 (192)
432 3c1r_A Glutaredoxin-1; oxidize 97.3 3E-05 1E-09 57.4 -0.3 57 182-245 27-93 (118)
433 2pn8_A Peroxiredoxin-4; thiore 97.3 0.00024 8.4E-09 58.2 5.1 88 177-268 47-176 (211)
434 2i81_A 2-Cys peroxiredoxin; st 97.3 0.00056 1.9E-08 56.1 7.2 92 48-141 51-179 (213)
435 1nm3_A Protein HI0572; hybrid, 97.3 0.00027 9.1E-09 59.1 5.2 45 177-222 32-79 (241)
436 2b7k_A SCO1 protein; metalloch 97.3 0.00099 3.4E-08 53.9 8.5 96 48-143 40-180 (200)
437 2yzh_A Probable thiol peroxida 97.3 0.00023 7.7E-09 56.1 4.5 43 177-222 46-89 (171)
438 1tp9_A Peroxiredoxin, PRX D (t 97.3 0.00024 8.3E-09 55.5 4.6 45 177-222 34-81 (162)
439 3zrd_A Thiol peroxidase; oxido 97.2 0.00042 1.4E-08 56.2 5.8 43 177-222 77-120 (200)
440 1psq_A Probable thiol peroxida 97.2 0.00023 7.9E-09 55.6 3.9 43 177-222 41-84 (163)
441 2pwj_A Mitochondrial peroxired 97.2 0.00014 4.6E-09 57.6 2.5 43 179-222 45-89 (171)
442 1eej_A Thiol:disulfide interch 97.2 0.0005 1.7E-08 56.5 5.6 83 49-141 86-210 (216)
443 3rhb_A ATGRXC5, glutaredoxin-C 97.2 0.00042 1.4E-08 50.6 4.6 54 182-245 21-84 (113)
444 3hz8_A Thiol:disulfide interch 97.2 0.00044 1.5E-08 55.8 5.1 44 177-222 23-66 (193)
445 3ztl_A Thioredoxin peroxidase; 97.1 0.0011 3.6E-08 54.7 7.1 91 48-140 68-196 (222)
446 3uma_A Hypothetical peroxiredo 97.1 0.00072 2.5E-08 54.1 5.7 44 178-222 56-102 (184)
447 1t3b_A Thiol:disulfide interch 97.0 0.0014 4.6E-08 53.7 6.9 82 49-140 86-209 (211)
448 2khp_A Glutaredoxin; thioredox 97.0 0.00043 1.5E-08 48.4 3.3 54 181-244 7-66 (92)
449 3gv1_A Disulfide interchange p 97.0 0.001 3.6E-08 51.1 5.5 78 177-268 13-138 (147)
450 3msz_A Glutaredoxin 1; alpha-b 96.9 0.0011 3.8E-08 45.7 4.7 73 180-269 4-87 (89)
451 4dvc_A Thiol:disulfide interch 96.9 0.0035 1.2E-07 49.5 8.0 39 178-216 21-59 (184)
452 3gkn_A Bacterioferritin comigr 96.9 0.0029 9.8E-08 49.0 7.3 90 49-140 35-160 (163)
453 3p7x_A Probable thiol peroxida 96.8 0.00066 2.3E-08 53.1 3.3 86 177-266 45-165 (166)
454 3tjj_A Peroxiredoxin-4; thiore 96.8 0.0013 4.6E-08 55.4 5.3 45 177-222 90-135 (254)
455 1wik_A Thioredoxin-like protei 96.8 0.0015 5.2E-08 47.3 4.6 64 168-244 6-80 (109)
456 3mng_A Peroxiredoxin-5, mitoch 96.8 0.0017 5.8E-08 51.3 5.2 45 177-222 42-89 (173)
457 1v58_A Thiol:disulfide interch 96.6 0.0021 7.3E-08 53.7 5.2 86 51-141 99-232 (241)
458 3l9v_A Putative thiol-disulfid 96.5 0.00089 3E-08 53.7 2.2 43 178-222 14-59 (189)
459 1xvq_A Thiol peroxidase; thior 96.5 0.011 3.6E-07 46.5 8.5 74 49-124 44-145 (175)
460 1h75_A Glutaredoxin-like prote 96.5 0.00049 1.7E-08 46.7 0.5 74 53-141 3-77 (81)
461 2i3y_A Epididymal secretory gl 96.4 0.022 7.4E-07 46.6 9.9 42 48-90 55-98 (215)
462 1r7h_A NRDH-redoxin; thioredox 96.4 0.0037 1.3E-07 41.3 4.3 70 53-137 3-73 (75)
463 2c0d_A Thioredoxin peroxidase 96.3 0.011 3.9E-07 48.5 7.7 94 48-141 55-183 (221)
464 3h93_A Thiol:disulfide interch 96.3 0.0069 2.4E-07 48.4 6.0 40 49-88 25-65 (192)
465 3a2v_A Probable peroxiredoxin; 96.3 0.0043 1.5E-07 52.0 4.8 86 55-142 40-162 (249)
466 3h8q_A Thioredoxin reductase 3 96.2 0.0037 1.3E-07 45.6 3.7 53 182-244 19-80 (114)
467 2r37_A Glutathione peroxidase 96.2 0.029 9.9E-07 45.5 9.5 41 48-89 37-79 (207)
468 1kte_A Thioltransferase; redox 96.2 0.0035 1.2E-07 44.7 3.5 63 43-112 6-73 (105)
469 1prx_A HORF6; peroxiredoxin, h 96.1 0.0066 2.2E-07 50.0 5.3 88 180-268 34-168 (224)
470 2a4v_A Peroxiredoxin DOT5; yea 96.1 0.013 4.4E-07 45.1 6.7 76 52-131 38-140 (159)
471 3ixr_A Bacterioferritin comigr 96.1 0.014 4.8E-07 46.1 7.0 92 49-140 51-176 (179)
472 3feu_A Putative lipoprotein; a 96.1 0.0028 9.6E-08 50.6 2.8 40 178-221 22-61 (185)
473 2v2g_A Peroxiredoxin 6; oxidor 96.1 0.0047 1.6E-07 51.3 4.2 89 179-268 30-164 (233)
474 3hd5_A Thiol:disulfide interch 96.0 0.015 5.2E-07 46.5 6.8 41 49-89 25-66 (195)
475 2pn8_A Peroxiredoxin-4; thiore 95.9 0.018 6.3E-07 46.8 7.1 93 49-141 48-176 (211)
476 3ctg_A Glutaredoxin-2; reduced 95.9 0.0026 8.9E-08 47.6 1.6 56 182-244 39-104 (129)
477 1n8j_A AHPC, alkyl hydroperoxi 95.8 0.018 6.3E-07 45.7 6.6 94 49-142 30-156 (186)
478 3qpm_A Peroxiredoxin; oxidored 95.7 0.022 7.4E-07 47.4 6.8 91 48-140 76-204 (240)
479 1xcc_A 1-Cys peroxiredoxin; un 95.7 0.0072 2.5E-07 49.6 3.8 88 180-268 34-165 (220)
480 3p7x_A Probable thiol peroxida 95.6 0.028 9.7E-07 43.5 6.8 89 49-139 46-165 (166)
481 3me7_A Putative uncharacterize 95.6 0.05 1.7E-06 42.4 8.3 94 49-142 28-162 (170)
482 1q98_A Thiol peroxidase, TPX; 95.6 0.013 4.5E-07 45.5 4.8 57 49-106 43-101 (165)
483 4g2e_A Peroxiredoxin; redox pr 95.6 0.012 3.9E-07 45.5 4.4 92 48-139 29-155 (157)
484 1z6m_A Conserved hypothetical 95.6 0.022 7.5E-07 44.6 6.0 45 177-221 26-70 (175)
485 2hze_A Glutaredoxin-1; thiored 95.5 0.0061 2.1E-07 44.4 2.4 58 51-113 19-81 (114)
486 3tjj_A Peroxiredoxin-4; thiore 95.5 0.031 1.1E-06 46.9 7.1 93 48-140 90-218 (254)
487 2rem_A Disulfide oxidoreductas 95.4 0.019 6.5E-07 45.7 5.2 41 178-220 25-65 (193)
488 2lqo_A Putative glutaredoxin R 95.4 0.04 1.4E-06 38.4 6.2 77 52-142 5-84 (92)
489 1un2_A DSBA, thiol-disulfide i 95.1 0.0054 1.8E-07 49.5 1.1 42 49-90 113-158 (197)
490 2ct6_A SH3 domain-binding glut 95.1 0.031 1.1E-06 40.4 4.9 50 181-238 9-78 (111)
491 2znm_A Thiol:disulfide interch 95.0 0.091 3.1E-06 41.7 8.2 38 51-88 24-62 (195)
492 3zrd_A Thiol peroxidase; oxido 95.0 0.034 1.1E-06 44.8 5.6 57 49-106 78-136 (200)
493 2cq9_A GLRX2 protein, glutared 95.0 0.025 8.4E-07 42.2 4.4 53 52-112 28-85 (130)
494 2yzh_A Probable thiol peroxida 95.0 0.024 8.2E-07 44.2 4.5 57 49-106 47-105 (171)
495 4gqc_A Thiol peroxidase, perox 95.0 0.0064 2.2E-07 47.4 1.1 97 46-142 30-160 (164)
496 1psq_A Probable thiol peroxida 95.0 0.024 8.3E-07 43.8 4.4 61 48-111 41-103 (163)
497 1t1v_A SH3BGRL3, SH3 domain-bi 94.9 0.025 8.5E-07 39.4 4.0 49 182-238 4-66 (93)
498 2klx_A Glutaredoxin; thioredox 94.6 0.029 1E-06 38.5 3.6 52 52-112 7-60 (89)
499 1aba_A Glutaredoxin; electron 94.6 0.027 9.2E-07 38.6 3.3 49 182-238 2-70 (87)
500 3ic4_A Glutaredoxin (GRX-1); s 94.4 0.037 1.3E-06 38.2 3.8 73 51-138 12-91 (92)
No 1
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=1.2e-41 Score=307.39 Aligned_cols=267 Identities=38% Similarity=0.699 Sum_probs=237.6
Q ss_pred CCcccCCcccccCCCCCCHHHHHHHHHhcCCCceEEeCCCcccccccCCC-ccEEEEEeeC-CchhhhhHHHHHHHHhcc
Q 021368 1 MVKKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPI-KNQLLLFAVS-NDSEKLLPVFEEAAKSFK 78 (313)
Q Consensus 1 ~~~~~~~~~~~y~~g~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~~~~~-~~~v~f~~~~-~~c~~~~~~~~~~a~~~~ 78 (313)
|||+.|+..+.| +|+++..+|.+||..++.|+|.+++++++..++.... .++++||++| ++|+++.+.|+++|.+|+
T Consensus 87 lfk~f~~~~~~~-~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~ 165 (361)
T 3uem_A 87 LFKKFDEGRNNF-EGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFK 165 (361)
T ss_dssp EEESSTTSEEEC-CSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGT
T ss_pred EEEecCCCcccc-CCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHcc
Confidence 478888999999 9999999999999999999999999999999887654 4567799999 999999999999999999
Q ss_pred CeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCC-CceeccC-CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 021368 79 GKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDD-AKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPE 156 (313)
Q Consensus 79 ~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~-~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~ 156 (313)
+++.|+.|||+... ++.+|+.|||.+...|+++++..+. ..+|.+. |.++.++|.+|+.+++.|++++..+|+++|+
T Consensus 166 ~~i~f~~vd~~~~~-~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~ 244 (361)
T 3uem_A 166 GKILFIFIDSDHTD-NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPE 244 (361)
T ss_dssp TTCEEEEECTTSGG-GHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCT
T ss_pred CceEEEEecCChHH-HHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCc
Confidence 99999999999433 7799999999982239999998744 3455543 7899999999999999999999999999998
Q ss_pred C-CCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCce
Q 021368 157 T-NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPT 235 (313)
Q Consensus 157 ~-~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~ 235 (313)
. ....|..+++++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+++...+.++.+|++.+...+++|.++|+
T Consensus 245 ~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt 324 (361)
T 3uem_A 245 DWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPT 324 (361)
T ss_dssp TTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSE
T ss_pred ccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCe
Confidence 6 578899999999999998889999999999999999999999999999998866799999999999989999999999
Q ss_pred EEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 236 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 236 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
+++|++|... .+..|.|.++.+.|.+||+++...
T Consensus 325 ~~~~~~~~~~-~~~~~~G~~~~~~l~~~l~~~~~~ 358 (361)
T 3uem_A 325 LKFFPASADR-TVIDYNGERTLDGFKKFLESGGQD 358 (361)
T ss_dssp EEEECSSSSC-CCEECCSCSSHHHHHHHHTTTSCS
T ss_pred EEEEECCCCc-ceeEecCCCCHHHHHHHHHhcCCC
Confidence 9999777443 567999999999999999998643
No 2
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=3.8e-34 Score=267.79 Aligned_cols=262 Identities=34% Similarity=0.563 Sum_probs=229.7
Q ss_pred ccCCcccccCC-CCCCHHHHHHHHHhcCCCceEEeCCCcccccccCCCccEEEEEeeC-C-c---hhhhhHHHHHHHHhc
Q 021368 4 KETEKISYFAD-GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS-N-D---SEKLLPVFEEAAKSF 77 (313)
Q Consensus 4 ~~~~~~~~y~~-g~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~-~---c~~~~~~~~~~a~~~ 77 (313)
+.++..+.| + |.++..+|.+||..+..|++.++|.+++..+... +.++.|+... . . ++.+...+.++|.+|
T Consensus 190 ~~~~~~~~y-~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~ 266 (481)
T 3f8u_A 190 KFEDKTVAY-TEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKF 266 (481)
T ss_dssp TTBCSEEEC-CCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTTS--SEEEEEECCCTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccccc-CCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcCC--CceEEEEecccccchhhHHHHHHHHHHHHHHh
Confidence 567888999 8 7899999999999999999999999999988754 4555565543 2 2 234688899999999
Q ss_pred cCe---EEEEEEeCCCcccccchhhhhCCCCC--CCcEEEEEcCCCCceeccCCCCCHH--HHHHHHHHHhcCCCCCCCC
Q 021368 78 KGK---LIFVYVQMDNEDVGKPVSEYFGITGE--APKVLAYTGNDDAKKHILDGELTLD--KIKTFGEDFLEGKLKPFFK 150 (313)
Q Consensus 78 ~~~---v~f~~vd~~~~~~~~~l~~~~~v~~~--~~P~i~~~~~~~~~~~~~~g~~~~~--~i~~fi~~~~~~~~~~~~~ 150 (313)
.++ +.|+.+|+.+ +..+++.||+... ..|.++++.. ...+|.+.+..+.+ +|.+|+.+++.|++.++++
T Consensus 267 ~~k~~~i~F~~~D~~~---~~~~l~~~gl~~~~~~~P~~~i~~~-~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~ 342 (481)
T 3f8u_A 267 LDAGHKLNFAVASRKT---FSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLK 342 (481)
T ss_dssp HHTTCCCEEEEEETTT---THHHHGGGTCCCCTTCSCEEEEECS-SSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCCceEEEEEEcHHH---HHHHHHHcCCCcccCCCcEEEEEcC-CCcccCCCcccCccHHHHHHHHHHHhcCCcccccc
Confidence 998 9999999988 5588899999832 4699998873 34678888889999 9999999999999999999
Q ss_pred CCCCCCCCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-ccCC
Q 021368 151 SDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-HRAK 229 (313)
Q Consensus 151 s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-~~~~ 229 (313)
|+++|......|..+++++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+++..++.++.+|++.++. ..++
T Consensus 343 s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~~~~ 422 (481)
T 3f8u_A 343 SEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYE 422 (481)
T ss_dssp CCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSCCCTTCC
T ss_pred cCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchhhHhhCC
Confidence 999999888999999999999999877899999999999999999999999999999886679999999999866 6899
Q ss_pred CCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCCcc
Q 021368 230 SDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 273 (313)
Q Consensus 230 v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~ 273 (313)
+.++||+++|++|..+ .+..|.|..+.+.|.+||.++++.+..
T Consensus 423 v~~~Pt~~~~~~~~~~-~~~~~~G~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 423 VRGFPTIYFSPANKKL-NPKKYEGGRELSDFISYLQREATNPPV 465 (481)
T ss_dssp CCSSSEEEEECTTCTT-SCEECCSCCSHHHHHHHHHHHCSSCCC
T ss_pred CcccCEEEEEeCCCeE-eeeEeCCCCCHHHHHHHHHHhcCCccc
Confidence 9999999999998875 567999999999999999999875554
No 3
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=1.6e-34 Score=271.88 Aligned_cols=266 Identities=30% Similarity=0.486 Sum_probs=232.6
Q ss_pred CcccCCcccccCCCC-C---CHHHHHHHHHhcCCCceEEeCCCcccccccCCCccEEEEEeeCCchhhhhHHHHHHHHhc
Q 021368 2 VKKETEKISYFADGK-F---DKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSF 77 (313)
Q Consensus 2 ~~~~~~~~~~y~~g~-~---~~~~l~~fi~~~~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~~~c~~~~~~~~~~a~~~ 77 (313)
+|..+ ..+.| +|+ + +..+|..||..+..|.+.++|.+++..++..+....++|+.....-+.+...|+++|.++
T Consensus 189 ~~~~~-~~~~~-~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~ 266 (504)
T 2b5e_A 189 PSAMD-EPVVY-NGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKN 266 (504)
T ss_dssp TTEEE-EEEEC-CSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCC-ccccc-CCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhc
Confidence 45545 77889 999 7 999999999999999999999999999998887766667655422378999999999999
Q ss_pred cCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccC--CC-----------CCHHHHHHHHHHHhcCC
Q 021368 78 KGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD--GE-----------LTLDKIKTFGEDFLEGK 144 (313)
Q Consensus 78 ~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~--g~-----------~~~~~i~~fi~~~~~~~ 144 (313)
.+++.|+++||+. .+.+|+.||+ ....|++++++.....+|.+. +. .+.+.|..|+.+++.|+
T Consensus 267 ~~~i~F~~id~~~---~~~~~~~~gl-~~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~ 342 (504)
T 2b5e_A 267 RGLMNFVSIDARK---FGRHAGNLNM-KEQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGD 342 (504)
T ss_dssp TTTCEEEEEEHHH---HTTHHHHTTC-CSCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTC
T ss_pred CCeeEEEEEehhh---hHHHHHHcCC-cccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCC
Confidence 9999999999987 5689999999 655699999987655667665 55 88999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhc-CCCcEEEEEEeCCCc
Q 021368 145 LKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLR-GVDSIVIAKMDGTTN 223 (313)
Q Consensus 145 ~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~-~~~~v~~~~vd~~~~ 223 (313)
+.+..+|+++|....+.|..+++++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+. ....+.++.+|++.+
T Consensus 343 ~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~ 422 (504)
T 2b5e_A 343 ASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEN 422 (504)
T ss_dssp CCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGC
T ss_pred CChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcc
Confidence 9999999999988888999999999999998889999999999999999999999999999987 334799999999988
Q ss_pred ccccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCCccc
Q 021368 224 EHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKI 274 (313)
Q Consensus 224 ~~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~ 274 (313)
....+++.++||+++|++|... .+..|.|..+.+.|.+||++++......
T Consensus 423 ~~~~~~v~~~Pt~~~~~~G~~~-~~~~~~G~~~~~~l~~~i~~~~~~~~~~ 472 (504)
T 2b5e_A 423 DVRGVVIEGYPTIVLYPGGKKS-ESVVYQGSRSLDSLFDFIKENGHFDVDG 472 (504)
T ss_dssp CCSSCCCSSSSEEEEECCTTSC-CCCBCCSCCCHHHHHHHHHHHCTTCCCH
T ss_pred ccccCCceecCeEEEEeCCcee-cceEecCCCCHHHHHHHHHhcCCCCCCH
Confidence 7755999999999999988764 4568999999999999999998766543
No 4
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=4.6e-33 Score=237.02 Aligned_cols=219 Identities=21% Similarity=0.390 Sum_probs=192.0
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe---EEEEEEeCCCcccccchhhhhCCCCC
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~---v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
.+.+..|+.++|+..+..+..++|.||++| ++|+.+.|.|.+++.++.+. +.|+.|||+. ++.+|++|||+++
T Consensus 14 ~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~~ 90 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS---ASVLASRFDVSGY 90 (241)
T ss_dssp ETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT---CHHHHHHTTCCSS
T ss_pred CCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC---CHHHHHhcCCCcC
Confidence 346899999999999988889999999999 99999999999999999876 9999999998 6699999999999
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcEEEEEe
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIY 186 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy 186 (313)
|+++++++|. ...+.|.++.+.|.+|+.+.+..... .....+..++.++|++.+ ..+++++|+||
T Consensus 91 --Pt~~~~~~g~--~~~~~g~~~~~~l~~~i~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~v~f~ 155 (241)
T 3idv_A 91 --PTIKILKKGQ--AVDYEGSRTQEEIVAKVREVSQPDWT----------PPPEVTLVLTKENFDEVV-NDADIILVEFY 155 (241)
T ss_dssp --SEEEEEETTE--EEECCSCSCHHHHHHHHHHHHSTTCC----------CCCCSSEECCTTTHHHHH-HHCSEEEEEEE
T ss_pred --CEEEEEcCCC--cccccCcccHHHHHHHHhhccCcccc----------cccccceeccHHHHHHhh-ccCCeEEEEEE
Confidence 9999997664 45689999999999999998763221 123567889999999988 45789999999
Q ss_pred CCCCccchhhhHHHHHHHHHhcCC-CcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHH
Q 021368 187 APWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKF 263 (313)
Q Consensus 187 ~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~f 263 (313)
++||++|+.+.+.|.+++..+++. ..+.++.+|++.+.. .+|+|.++|++++|++|+.+ .|.|..+.+.|.+|
T Consensus 156 a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~----~~~g~~~~~~l~~~ 231 (241)
T 3idv_A 156 APWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPY----DYNGPREKYGIVDY 231 (241)
T ss_dssp CTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE----ECCSCCSHHHHHHH
T ss_pred CCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEE----EecCCCCHHHHHHH
Confidence 999999999999999999999763 459999999998865 78999999999999988654 69999999999999
Q ss_pred HHhcCCCC
Q 021368 264 LKKNASIP 271 (313)
Q Consensus 264 i~~~~~~~ 271 (313)
|+++++..
T Consensus 232 l~~~~~~~ 239 (241)
T 3idv_A 232 MIEQSGAA 239 (241)
T ss_dssp HHHHTTCT
T ss_pred HHhhhCCC
Confidence 99997643
No 5
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=2.7e-32 Score=269.24 Aligned_cols=239 Identities=19% Similarity=0.280 Sum_probs=212.5
Q ss_pred CcccC-CcccccCCCCCCHHHHHHHHHhcCCCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccC
Q 021368 2 VKKET-EKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG 79 (313)
Q Consensus 2 ~~~~~-~~~~~y~~g~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~ 79 (313)
++..+ +.+..| .|+++..+|..|+..+..+.|.+++.++|..+ .+..++|.||++| ++|+.+.|.|.++|.++++
T Consensus 410 ~~~~~~e~~~~~-~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~ 486 (780)
T 3apo_A 410 FKGQGTKEYEIH-HGKKILYDILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYG 486 (780)
T ss_dssp EESSTTSSEEEC-CSCCCHHHHHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCCcceeeec-ccHhhHHHHHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC
Confidence 44555 568889 99999999999999999999999999999988 5668899999999 9999999999999999998
Q ss_pred eEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q 021368 80 KLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETND 159 (313)
Q Consensus 80 ~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~ 159 (313)
++.|+.|||++ +..+|+.|||+++ |+++++++|. .+.|.|.++.++|.+|+.+++.
T Consensus 487 ~v~~~~vd~~~---~~~~~~~~~v~~~--Pt~~~~~~g~--~~~~~g~~~~~~l~~fi~~~~~----------------- 542 (780)
T 3apo_A 487 QLKVGTLDCTI---HEGLCNMYNIQAY--PTTVVFNQSS--IHEYEGHHSAEQILEFIEDLRN----------------- 542 (780)
T ss_dssp TCEEEEEETTT---CHHHHHHTTCCSS--SEEEEEETTE--EEEECSCSCHHHHHHHHHHHHS-----------------
T ss_pred CeEEEEEeCCC---CHHHHHHcCCCcC--CeEEEEcCCc--eeeecCcccHHHHHHHHHhhcc-----------------
Confidence 99999999998 5699999999998 9999997653 4778999999999999999986
Q ss_pred CCeEEEcCcChHHHhhcC--CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCce
Q 021368 160 GDVKIVVGNNFDEIVLDE--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPT 235 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~--~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~ 235 (313)
+.|..|+.++|++++.+. ++.++|.||+|||++|+.+.+.|.++|..+++ .+.|+.+||+.+.. ..+++.++|+
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt 620 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFCTQENVQRYPE 620 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHHHHcCCCCCCe
Confidence 458889999999988653 46789999999999999999999999999987 69999999998765 6899999999
Q ss_pred EEEEeCCCCC-cCceeecc-CcCHHHHHHHHHhcCC
Q 021368 236 ILFFPAGNKS-FDPINVDV-DRTVVALYKFLKKNAS 269 (313)
Q Consensus 236 i~~~~~g~~~-~~~~~y~g-~~~~~~l~~fi~~~~~ 269 (313)
+++|+.|... ..++.|.| .++.+.|.+||.+.+.
T Consensus 621 i~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 656 (780)
T 3apo_A 621 IRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLP 656 (780)
T ss_dssp EEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSC
T ss_pred EEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcc
Confidence 9999887652 14668999 8999999999999874
No 6
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.97 E-value=2.1e-31 Score=262.92 Aligned_cols=235 Identities=16% Similarity=0.305 Sum_probs=208.0
Q ss_pred CcccccCCCCCCHHHHHHHHHhcCCCceEEeCCCcccccccC---CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEE
Q 021368 7 EKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFES---PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLI 82 (313)
Q Consensus 7 ~~~~~y~~g~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~~~---~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~ 82 (313)
+....| .|.++..+|..|+.....+.|..|+.++|++++.. ...++|.||++| ++|+++.|.|+++|..+++.+.
T Consensus 519 g~~~~~-~g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~ 597 (780)
T 3apo_A 519 SSIHEY-EGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLIN 597 (780)
T ss_dssp TEEEEE-CSCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSE
T ss_pred Cceeee-cCcccHHHHHHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeE
Confidence 455788 99999999999999998899999999999997754 345688999999 9999999999999999999999
Q ss_pred EEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCC---ceeccCC-CCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 021368 83 FVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDA---KKHILDG-ELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 158 (313)
Q Consensus 83 f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~---~~~~~~g-~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~ 158 (313)
|+.+||+. +..+|+.++|.++ |+++++..+.. ....|.| .++.++|.+|+.+.+.
T Consensus 598 ~~~vd~~~---~~~l~~~~~v~~~--Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~---------------- 656 (780)
T 3apo_A 598 VGSVDCGQ---YHSFCTQENVQRY--PEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLP---------------- 656 (780)
T ss_dssp EEEEETTT---THHHHHHTTCCSS--SEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSC----------------
T ss_pred EEEEECcc---hHHHHHHcCCCCC--CeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcc----------------
Confidence 99999998 6699999999998 99999987653 2456899 8999999999998753
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
..+..++.++|.+.+...+++++|+||++||++|+.+.|.|.+++..+++ ++.++.+|++.+.. .+++|.++|++
T Consensus 657 -~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 733 (780)
T 3apo_A 657 -QASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSV 733 (780)
T ss_dssp -CCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred -cccccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CceEEEEECCCCHHHHHhcCCCcCCEE
Confidence 34778999999988877889999999999999999999999999999976 69999999998865 78999999999
Q ss_pred EEEeCCCCCcCceeecc----CcCHHHHHHHHHhcCC
Q 021368 237 LFFPAGNKSFDPINVDV----DRTVVALYKFLKKNAS 269 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g----~~~~~~l~~fi~~~~~ 269 (313)
++|++|..+. ++.| ..+.+.|.+||.+++.
T Consensus 734 ~~~~~g~~~~---~~~G~~~g~~~~~~l~~~l~~~l~ 767 (780)
T 3apo_A 734 KLYQYERAKK---SIWEEQINSRDAKTIAALIYGKLE 767 (780)
T ss_dssp EEEEEETTTT---EEEEEEECCCCHHHHHHHHHHHTT
T ss_pred EEEcCCCccc---cccCcccCCcCHHHHHHHHHHHHH
Confidence 9999888764 4555 5799999999999973
No 7
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.95 E-value=2.3e-28 Score=206.04 Aligned_cols=195 Identities=14% Similarity=0.167 Sum_probs=160.2
Q ss_pred ccEEEEEee-C-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCC
Q 021368 51 KNQLLLFAV-S-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGEL 128 (313)
Q Consensus 51 ~~~v~f~~~-~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~ 128 (313)
..+++||++ | ++|+.+.|.|+++|.. .+++.|+.|||++.. ++++|++|||.++ |+++++.+|......|.|.+
T Consensus 24 v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~-~~~~~~~~~v~~~--Pt~~~~~~g~~~~~~~~G~~ 99 (226)
T 1a8l_A 24 VKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPE-GKELAKRYRIDRA--PATTITQDGKDFGVRYFGLP 99 (226)
T ss_dssp EEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHH-HHHHHHHTTCCSS--SEEEEEETTBCCSEEEESCC
T ss_pred eEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcc-cHHHHHHcCCCcC--ceEEEEcCCceeeEEEeccC
Confidence 456779999 9 9999999999999965 566999999999732 4599999999988 99999977654446788989
Q ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcE-EEEEeCCCCccchhhhHHHHHHHHHh
Q 021368 129 TLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDV-LLEIYAPWCGHCQAFEPTYNKLAKHL 207 (313)
Q Consensus 129 ~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~-lv~fy~~~C~~C~~~~~~~~~la~~~ 207 (313)
+.+.+..|+...+.... .+..++.++++.+. ..++++ +|.||++||++|+.+.|.|.+++..+
T Consensus 100 ~~~~l~~~l~~~l~~~~---------------~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~ 163 (226)
T 1a8l_A 100 AGHEFAAFLEDIVDVSR---------------EETNLMDETKQAIR-NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIEN 163 (226)
T ss_dssp CTTHHHHHHHHHHHHHH---------------TCCCCCHHHHHHHT-TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcC---------------CCCCCCHHHHHHHH-hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhc
Confidence 99999999988764211 12346667777754 445566 99999999999999999999999998
Q ss_pred cC--CCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 208 RG--VDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 208 ~~--~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
.+ ..++.++.+|++.+.. .+|++.++|++++|++|+... .|.|..+.+.|.+||++.+
T Consensus 164 ~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 164 TKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRV---EFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred ccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeE---EEcCCCCHHHHHHHHHHhh
Confidence 72 1369999999998765 789999999999999887653 8999999999999998764
No 8
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.95 E-value=2.4e-27 Score=200.27 Aligned_cols=190 Identities=13% Similarity=0.101 Sum_probs=157.9
Q ss_pred CCccEEEEE-----eeC-CchhhhhHHHHHHHHhc--cCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCc
Q 021368 49 PIKNQLLLF-----AVS-NDSEKLLPVFEEAAKSF--KGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAK 120 (313)
Q Consensus 49 ~~~~~v~f~-----~~~-~~c~~~~~~~~~~a~~~--~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~ 120 (313)
..+++|.|| ++| ++|+.+.|.|.++|..+ .+++.|+.|||+. ++.+|++|||+++ |++++|+++ ..
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Ptl~~~~~~-~~ 93 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT---HKEETEKYGVDRV--PTIVIEGDK-DY 93 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT---CHHHHHHTTCCBS--SEEEEESSS-CC
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc---cHHHHHHcCCCcC--cEEEEECCC-cc
Confidence 345666666 788 99999999999999988 6789999999998 6799999999999 999999753 34
Q ss_pred eeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcE-EEEEeCCCCccchhhhHH
Q 021368 121 KHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDV-LLEIYAPWCGHCQAFEPT 199 (313)
Q Consensus 121 ~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~-lv~fy~~~C~~C~~~~~~ 199 (313)
...|.|.++.+++..|+...+... +.+..++.++|++.+ ..++++ +++||++||++|+.+.+.
T Consensus 94 ~~~~~G~~~~~~l~~~~~~~~~~~---------------~~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~~~ 157 (229)
T 2ywm_A 94 GIRYIGLPAGLEFTTLINGIFHVS---------------QRKPQLSEKTLELLQ-VVDIPIEIWVFVTTSCGYCPSAAVM 157 (229)
T ss_dssp CEEEESCCCTTHHHHHHHHHHHHH---------------TTCCSCCHHHHHHHT-TCCSCEEEEEEECTTCTTHHHHHHH
T ss_pred cceecCCccHHHHHHHHHHHHhcc---------------CCccCCCHHHHHHHH-hcCCCeEEEEEECCCCcchHHHHHH
Confidence 667899999999999998876411 123457778888876 344555 889999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 200 YNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 200 ~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+.+++..+. ++.++.+|++.+.. .+|++.++|++++ +|. + .+|.|..+.+.|.+||++.+.
T Consensus 158 ~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~---~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 158 AWDFALAND---YITSKVIDASENQDLAEQFQVVGVPKIVI--NKG-V---AEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp HHHHHHHCT---TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-T---EEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCC---CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCE-E---EEeeCCCCHHHHHHHHHHHhh
Confidence 999999972 69999999998765 7899999999998 555 3 269999999999999998763
No 9
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.93 E-value=6.6e-25 Score=186.79 Aligned_cols=197 Identities=12% Similarity=0.090 Sum_probs=154.8
Q ss_pred CccEEEEEeeC---CchhhhhHHHHHHHHh---ccCe--EEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCce
Q 021368 50 IKNQLLLFAVS---NDSEKLLPVFEEAAKS---FKGK--LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKK 121 (313)
Q Consensus 50 ~~~~v~f~~~~---~~c~~~~~~~~~~a~~---~~~~--v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~ 121 (313)
.++.|.||++| ++|+.+.+.++++|.. ++++ |.|+.+|+++ ++.+|++|||+++ |+++++ ++ .
T Consensus 26 ~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~---~~~~~~~~gv~~~--Pt~~i~-~g---~ 96 (243)
T 2hls_A 26 NPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRES---DSDKFSEFKVERV--PTVAFL-GG---E 96 (243)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTT---THHHHHHTTCCSS--SEEEET-TT---T
T ss_pred CCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCc---CHHHHHhcCCCcC--CEEEEE-CC---c
Confidence 46778899998 7899999999999998 5555 9999999998 6799999999988 999998 33 4
Q ss_pred eccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHH
Q 021368 122 HILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYN 201 (313)
Q Consensus 122 ~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~ 201 (313)
..|.|..+.+.+..|+..++.....+. .++.+.+..+....++.+++.||++||++|+.+.|.|.
T Consensus 97 ~~~~G~~~~~~l~~fv~~~l~~~~~~~---------------~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~ 161 (243)
T 2hls_A 97 VRWTGIPAGEEIRALVEVIMRLSEDES---------------GLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAH 161 (243)
T ss_dssp EEEESCCCTTHHHHHHHHHHHHHTTCC---------------CCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHH
T ss_pred eeEcCCCcHHHHHHHHHHHHhccCCCC---------------CCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHH
Confidence 567788888999999988764211110 13333444432223567799999999999999999999
Q ss_pred HHHHHhc--CCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCCccccCC
Q 021368 202 KLAKHLR--GVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKP 277 (313)
Q Consensus 202 ~la~~~~--~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~~~~ 277 (313)
+++..+. +..++.++.+|++.+.. ..|+|.++|++++ +|.. .|.|..+.+.|.+||.+.++........
T Consensus 162 ~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~-----~~~G~~~~~~l~~~l~~~~~~~~~~~g~ 234 (243)
T 2hls_A 162 MFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYL-----VFVGVPYEEDFLDYVKSAAEGRLTVKGP 234 (243)
T ss_dssp HHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEE-----EEESCCCHHHHHHHHHHHHTTCCCCCC-
T ss_pred HHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEE-----EEeCCCCHHHHHHHHHHHhhcccccCCC
Confidence 9999983 22369999999998765 6899999999988 5542 5999999999999999998765554433
No 10
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.91 E-value=1.2e-23 Score=189.72 Aligned_cols=210 Identities=17% Similarity=0.198 Sum_probs=172.1
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-Cchhhhh------HHHHHHHHhccC-eEEEEEEeCCCcccccchhhhhC
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLL------PVFEEAAKSFKG-KLIFVYVQMDNEDVGKPVSEYFG 102 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~------~~~~~~a~~~~~-~v~f~~vd~~~~~~~~~l~~~~~ 102 (313)
.+.|..||.++|++++.....++|.||++| ++|.... |.|+++|..+++ .+.|+.|||+. ++.+|++||
T Consensus 12 ~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~---~~~l~~~~~ 88 (367)
T 3us3_A 12 VDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK---DAAVAKKLG 88 (367)
T ss_dssp CCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT---THHHHHHHT
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc---cHHHHHHcC
Confidence 346899999999999888888999999999 8873332 689999999987 49999999998 679999999
Q ss_pred CCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEc-CcChHHHhhcCCCcE
Q 021368 103 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVV-GNNFDEIVLDESKDV 181 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~-~~~f~~~l~~~~k~~ 181 (313)
|+++ ||+.+|++|. ...|.|.++.+.|.+|+.+.++ ..+..++ .+++.+++....+.+
T Consensus 89 V~~~--PTl~~f~~G~--~~~y~G~~~~~~i~~~i~~~~~-----------------~~v~~i~~~~~~~~~~~~~~~~~ 147 (367)
T 3us3_A 89 LTEE--DSIYVFKEDE--VIEYDGEFSADTLVEFLLDVLE-----------------DPVELIEGERELQAFENIEDEIK 147 (367)
T ss_dssp CCST--TEEEEEETTE--EEECCSCCSHHHHHHHHHHHHS-----------------CSEEECCSHHHHHHHHHCCSSCE
T ss_pred CCcC--ceEEEEECCc--EEEeCCCCCHHHHHHHHHHhcC-----------------CCcEEcCCHHHHHHHhccCCCcE
Confidence 9999 9999998764 5689999999999999999876 4467775 477888774356889
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceEEEEeCCCCCcCceeeccC-cCHHHH
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVD-RTVVAL 260 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~-~~~~~l 260 (313)
+|.|+++||. ...+.|.++|..+++ .+.|+.+.. .....+++++. |++++|+.+.. .++.|.|. .+.+.|
T Consensus 148 vv~ff~~~~~---~~~~~f~~~A~~~~~--~~~F~~~~~-~~~~~~~~v~~-p~i~lf~~~~~--~~~~y~g~~~~~~~l 218 (367)
T 3us3_A 148 LIGYFKNKDS---EHYKAFKEAAEEFHP--YIPFFATFD-SKVAKKLTLKL-NEIDFYEAFME--EPVTIPDKPNSEEEI 218 (367)
T ss_dssp EEEECSCTTC---HHHHHHHHHHHHHTT--TSCEEEECC-HHHHHHHTCCT-TCEEEECTTCS--SCEECSSSSCCHHHH
T ss_pred EEEEECCCCc---hHHHHHHHHHHhhcC--CcEEEEECC-HHHHHHcCCCC-CeEEEEcCCCC--CCeecCCCCCCHHHH
Confidence 9999999865 667889999999987 578887653 22336788875 99999988654 56789994 899999
Q ss_pred HHHHHhcCCCCcc
Q 021368 261 YKFLKKNASIPFK 273 (313)
Q Consensus 261 ~~fi~~~~~~~~~ 273 (313)
.+||+.+.-+.+.
T Consensus 219 ~~fi~~~~~p~v~ 231 (367)
T 3us3_A 219 VNFVEEHRRSTLR 231 (367)
T ss_dssp HHHHHHTCSCSEE
T ss_pred HHHHHHcCcccee
Confidence 9999999755443
No 11
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.91 E-value=1.5e-23 Score=188.12 Aligned_cols=209 Identities=17% Similarity=0.182 Sum_probs=172.1
Q ss_pred CceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHH-------HHHHHHhccC-eEEEEEEeCCCcccccchhhhhC
Q 021368 32 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPV-------FEEAAKSFKG-KLIFVYVQMDNEDVGKPVSEYFG 102 (313)
Q Consensus 32 ~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~-------~~~~a~~~~~-~v~f~~vd~~~~~~~~~l~~~~~ 102 (313)
+.|..|+.++|+..+.....++|.||++| + |+.+.|. |+++|..+++ .+.|+.|||+. ++.+|++||
T Consensus 11 ~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~---~~~l~~~~~ 86 (350)
T 1sji_A 11 DRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK---EAKLAKKLG 86 (350)
T ss_dssp CCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT---THHHHHHHT
T ss_pred CccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC---CHHHHHhcC
Confidence 45889999999999888888999999999 8 9999888 9999999987 49999999999 669999999
Q ss_pred CCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEc-CcChHHHhhcCCCcE
Q 021368 103 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVV-GNNFDEIVLDESKDV 181 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~-~~~f~~~l~~~~k~~ 181 (313)
|+++ |++++|++|. ...|.|.++.+.|.+|+.+.++ ..+..++ .+++++++....+.+
T Consensus 87 v~~~--Pt~~~~~~g~--~~~~~G~~~~~~l~~~i~~~~~-----------------~~~~~l~~~~~~~~~~~~~~~~~ 145 (350)
T 1sji_A 87 FDEE--GSLYVLKGDR--TIEFDGEFAADVLVEFLLDLIE-----------------DPVEIINSKLEVQAFERIEDQIK 145 (350)
T ss_dssp CCST--TEEEEEETTE--EEEECSCCCHHHHHHHHHTTSS-----------------CSEEECCSHHHHHHHHHCCSSCE
T ss_pred CCcc--ceEEEEECCc--EEEecCCCCHHHHHHHHHHhcC-----------------CcceeccchHHHHHHhccCCCcE
Confidence 9999 9999998775 5688999999999999998765 3466774 467888764145678
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceEEEEeCCCCCcCceeeccC-cCHHHH
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVD-RTVVAL 260 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~-~~~~~l 260 (313)
+|.|+++||. ...+.|.++|..++. .+.|+.+.. .....++++. +|++++|+.+.. .++.|.|. .+.+.|
T Consensus 146 vv~ff~~~~~---~~~~~~~~~A~~~~~--~~~f~~~~~-~~~~~~~~v~-~p~i~~~~~~~~--~~~~y~g~~~~~~~l 216 (350)
T 1sji_A 146 LIGFFKSEES---EYYKAFEEAAEHFQP--YIKFFATFD-KGVAKKLSLK-MNEVDFYEPFMD--EPIAIPDKPYTEEEL 216 (350)
T ss_dssp EEEECSCTTS---HHHHHHHHHHHHTTT--TSEEEEECC-HHHHHHHTCC-TTCEEEECTTCS--SCEECSSSSCCHHHH
T ss_pred EEEEECCCCc---HHHHHHHHHHHhhcc--CcEEEEECC-HHHHHHcCCC-CCcEEEEeCCCC--CceecCCCCCCHHHH
Confidence 9999999864 556889999999976 688887742 2223678888 999999987654 45689996 899999
Q ss_pred HHHHHhcCCCCccc
Q 021368 261 YKFLKKNASIPFKI 274 (313)
Q Consensus 261 ~~fi~~~~~~~~~~ 274 (313)
.+||+.+.-+.+.-
T Consensus 217 ~~fi~~~~~p~v~e 230 (350)
T 1sji_A 217 VEFVKEHQRPTLRR 230 (350)
T ss_dssp HHHHHHHCCCSEEE
T ss_pred HHHHHHcCccchhh
Confidence 99999987544433
No 12
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.90 E-value=9.6e-23 Score=184.95 Aligned_cols=207 Identities=14% Similarity=0.206 Sum_probs=150.9
Q ss_pred CceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhc------cCeEEEEEEeCCCcccccchhhhhCCC
Q 021368 32 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSF------KGKLIFVYVQMDNEDVGKPVSEYFGIT 104 (313)
Q Consensus 32 ~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~------~~~v~f~~vd~~~~~~~~~l~~~~~v~ 104 (313)
..|..|+.++|+.++..+..++|.||++| ++|+++.|.|.++|..+ .+.+.|+.|||+. +..+|++|||+
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~---~~~l~~~~~v~ 81 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ---HSDIAQRYRIS 81 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT---CHHHHHHTTCC
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc---cHHHHHhcCCC
Confidence 35788999999998887888999999999 99999999999999998 4569999999998 66999999999
Q ss_pred CCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEc-CcChHHHhhcCCCcEEE
Q 021368 105 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVV-GNNFDEIVLDESKDVLL 183 (313)
Q Consensus 105 ~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~-~~~f~~~l~~~~k~~lv 183 (313)
++ |++++|.+|......|.|.++.+.|.+|+.+.+.. .+..++ .+++.. + ...+.++|
T Consensus 82 ~~--Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~-----------------~v~~l~~~~~l~~-l-~~~~~~~v 140 (382)
T 2r2j_A 82 KY--PTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSD-----------------PIQEIRDLAEITT-L-DRSKRNII 140 (382)
T ss_dssp EE--SEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSC-----------------CCEEC--------------CCEEE
T ss_pred cC--CEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccC-----------------CceecCCHHHHHH-h-cCCCCEEE
Confidence 99 99999987753333689999999999999999862 344453 345666 4 45678899
Q ss_pred EEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceEEEEeCCCCCcCceeeccCc-CHHHHHH
Q 021368 184 EIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVDR-TVVALYK 262 (313)
Q Consensus 184 ~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~-~~~~l~~ 262 (313)
.|++++|.+ ....|.++|..+++ .+.|+.... .....+++.+.| +++++.+... .+..|.|.+ +.+.|..
T Consensus 141 ~ff~~~~~~---~~~~f~~~A~~~~~--~~~F~~~~~--~~~~~~~v~~~p-i~~~~~~~~~-~~~~y~g~~~~~~~l~~ 211 (382)
T 2r2j_A 141 GYFEQKDSD---NYRVFERVANILHD--DCAFLSAFG--DVSKPERYSGDN-IIYKPPGHSA-PDMVYLGAMTNFDVTYN 211 (382)
T ss_dssp EEESCSSSH---HHHHHHHHHHHHTT--TCEEEEEES--CC--------CE-EEEECSSSSS-CCEECCSCTTCHHHHHH
T ss_pred EEECCCCCh---hHHHHHHHHHHhhc--cceEEEEeh--hhHHhhCCCCCc-eEECCCCCCC-cCcccCCCCCCHHHHHH
Confidence 999987654 46789999999987 567776665 234678888999 5555543322 456899988 8999999
Q ss_pred HHHhcCCCC
Q 021368 263 FLKKNASIP 271 (313)
Q Consensus 263 fi~~~~~~~ 271 (313)
||+.+..+.
T Consensus 212 fi~~~~~p~ 220 (382)
T 2r2j_A 212 WIQDKCVPL 220 (382)
T ss_dssp HHHHHHSCS
T ss_pred HHHhcccCc
Confidence 999986433
No 13
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.2e-22 Score=172.92 Aligned_cols=210 Identities=16% Similarity=0.200 Sum_probs=168.5
Q ss_pred CCCceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 30 KLPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
..+.|.+|+.++|++.+ ..+..++|.||++| ++|+.+.|.|.+++..+.+.+.|+.|||+... +..+|++|||.++
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~-~~~l~~~~~I~~~- 92 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNK-NKALCAKYDVNGF- 92 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTT-THHHHHHTTCCBS-
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCcc-CHHHHHhCCCCcc-
Confidence 45689999999999988 45667889999999 99999999999999999998999999998544 6799999999999
Q ss_pred CcEEEEEcCCCC----------------ceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEc-CcCh
Q 021368 108 PKVLAYTGNDDA----------------KKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVV-GNNF 170 (313)
Q Consensus 108 ~P~i~~~~~~~~----------------~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~-~~~f 170 (313)
|++++|..|.. ....|.|.++.+.|.+|+.+.+. ..+..++ .+++
T Consensus 93 -Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~-----------------~~v~~i~~~~~l 154 (298)
T 3ed3_A 93 -PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR-----------------SYVKKFVRIDTL 154 (298)
T ss_dssp -SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC-----------------CCEEECSCGGGH
T ss_pred -ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc-----------------cccEEcCCHHHH
Confidence 99999987751 35678999999999999999865 4466674 4678
Q ss_pred HHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc----ccCC-----C-----------
Q 021368 171 DEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH----HRAK-----S----------- 230 (313)
Q Consensus 171 ~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~----~~~~-----v----------- 230 (313)
++++....++.+++|.. .....+.|..+|..+++ .+.|+.++...... .+++ |
T Consensus 155 ~~~l~~~~~~~vi~fs~-----~~~~~~~f~~~A~~~~~--~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~ 227 (298)
T 3ed3_A 155 GSLLRKSPKLSVVLFSK-----QDKISPVYKSIALDWLG--KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQ 227 (298)
T ss_dssp HHHHTSCSSEEEEEEES-----SSSCCHHHHHHHHHTBT--TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCceEEEEEcC-----CCcchHHHHHHHHHhhc--CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccc
Confidence 88876555677777632 23456899999999988 79999988543221 1222 2
Q ss_pred --CcCceEEEEeCCCCCcCceeecc-CcCHHHHHHHHHhcC
Q 021368 231 --DGFPTILFFPAGNKSFDPINVDV-DRTVVALYKFLKKNA 268 (313)
Q Consensus 231 --~~~P~i~~~~~g~~~~~~~~y~g-~~~~~~l~~fi~~~~ 268 (313)
...|++++|+.... +++.|.| ..+.+.|.+||.++.
T Consensus 228 ~~~~~P~lv~~~~~~~--~~~~y~g~~~~~~~i~~fi~~~~ 266 (298)
T 3ed3_A 228 RQSDKSKLVVFDADKD--KFWEYEGNSINKNDISKFLRDTF 266 (298)
T ss_dssp TTCSSCEEEEEETTTT--EEEECCCSSCCHHHHHHHHHHHH
T ss_pred cccCCCeEEEEcCCCC--ceEEeccccCCHHHHHHHHHhhc
Confidence 67999999987655 5779996 689999999999543
No 14
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.86 E-value=5.8e-21 Score=178.41 Aligned_cols=214 Identities=16% Similarity=0.183 Sum_probs=171.2
Q ss_pred ceEEeCCCcccccccCC---CccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 33 LVTIFTRENAPSVFESP---IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 33 ~v~~lt~~~~~~~~~~~---~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
.|..||.++|+..+... ..++|.||++| ++|+.+.|.|.++|..+++.+.|+.|||+. ++.+|++|||+++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~-- 76 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTA---NTNTCNKYGVSGY-- 76 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTT---CHHHHHHTTCCEE--
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCC---CHHHHHhcCCCCC--
Confidence 47899999999988776 78899999999 999999999999999999999999999999 6699999999999
Q ss_pred cEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEE-cCcChHHHhhcCCCcEEEEEeC
Q 021368 109 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLDESKDVLLEIYA 187 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l-~~~~f~~~l~~~~k~~lv~fy~ 187 (313)
|++++|++|. ....|.|.++.+.|.+|+.+.++ ..+..+ +.+++.+++ .....++|.|+.
T Consensus 77 Ptl~~~~~g~-~~~~~~G~~~~~~l~~~~~~~~~-----------------~~~~~i~~~~~~~~~~-~~~~~~vv~~~~ 137 (481)
T 3f8u_A 77 PTLKIFRDGE-EAGAYDGPRTADGIVSHLKKQAG-----------------PASVPLRTEEEFKKFI-SDKDASIVGFFD 137 (481)
T ss_dssp SEEEEEETTE-EEEECCSCSSHHHHHHHHHHHTS-----------------CSEEEECSHHHHHHHT-TSSSCEEEEEES
T ss_pred CEEEEEeCCc-eeeeecCccCHHHHHHHHHhhcc-----------------cCceecCCHHHHHHHH-hcCCcEEEEEEC
Confidence 9999998764 45678999999999999999876 346666 446677765 456788888998
Q ss_pred CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceEEEEeCC----CCCcCceeec-cCcCHHHHHH
Q 021368 188 PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAG----NKSFDPINVD-VDRTVVALYK 262 (313)
Q Consensus 188 ~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i~~~~~g----~~~~~~~~y~-g~~~~~~l~~ 262 (313)
++|. .....|.++|..+++ .+.|+.+. +.....+++++..| +++|+.+ .....+..|. |..+.+.|.+
T Consensus 138 ~~~~---~~~~~f~~~a~~~~~--~~~F~~~~-~~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~ 210 (481)
T 3f8u_A 138 DSFS---EAHSEFLKAASNLRD--NYRFAHTN-VESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKK 210 (481)
T ss_dssp CTTC---HHHHHHHHHHHHHTT--TSCEEEEC-CHHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHH
T ss_pred CCcc---chHHHHHHHHHHhcc--CceEEEEC-CHHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHHHHHH
Confidence 8765 456789999999977 57777654 22333678887765 7888722 1111456898 7889999999
Q ss_pred HHHhcCCCCccccCC
Q 021368 263 FLKKNASIPFKIQKP 277 (313)
Q Consensus 263 fi~~~~~~~~~~~~~ 277 (313)
||..+.-+.+.-..+
T Consensus 211 fi~~~~~p~v~e~t~ 225 (481)
T 3f8u_A 211 FIQENIFGICPHMTE 225 (481)
T ss_dssp HHHHHTTTTSCEECT
T ss_pred HHHHhCCCCccccCh
Confidence 999997655444433
No 15
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.83 E-value=3.2e-20 Score=141.82 Aligned_cols=108 Identities=27% Similarity=0.482 Sum_probs=97.0
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcC---CCcEEEEEEeCCCccc--ccCCCCcC
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNEH--HRAKSDGF 233 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~---~~~v~~~~vd~~~~~~--~~~~v~~~ 233 (313)
.+.|..|+.++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+.. ...+.++.+|++.+.. .+++|.++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 467999999999999977789999999999999999999999999998752 2469999999998865 78999999
Q ss_pred ceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 234 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 234 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
|++++|++|... .+..|.|..+.+.|.+||.++
T Consensus 94 Pt~~~~~~g~~~-~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 94 PTMRYYTRIDKQ-EPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SEEEEECSSCSS-SCEECCSCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCC-CceEecCCccHHHHHHHHHhc
Confidence 999999998876 567899999999999999886
No 16
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.83 E-value=1.6e-19 Score=162.51 Aligned_cols=214 Identities=14% Similarity=0.114 Sum_probs=166.8
Q ss_pred HHHhcCCCceEEeCC-CcccccccCCCccEEEEEeeCCchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCC
Q 021368 25 FVFSNKLPLVTIFTR-ENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGI 103 (313)
Q Consensus 25 fi~~~~~~~v~~lt~-~~~~~~~~~~~~~~v~f~~~~~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v 103 (313)
|+.....+.+..+++ +++++++......+|.||.+. +......|.++|..+. .+.|+.++ +..+|+.+|+
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~--~~~~~~~f~~~A~~~~-~~~F~~t~------~~~v~~~~~v 80 (361)
T 3uem_A 10 LFQGPGSEFATTLPDGAAAESLVESSEVAVIGFFKDV--ESDSAKQFLQAAEAID-DIPFGITS------NSDVFSKYQL 80 (361)
T ss_dssp GTSCCCCSSSEECCSHHHHHHHHHTSSEEEEEECSCT--TSHHHHHHHHHHHHCS-SSCEEEEC------CHHHHHHTTC
T ss_pred EecCCccccceecCCHHHHHHHHhcCCcEEEEEEcCC--CchHHHHHHHHHhcCC-CceEEEEC------cHHHHHHhCC
Confidence 344445566777755 667777776655666677653 3344679999999995 48887654 3489999999
Q ss_pred CCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcEEE
Q 021368 104 TGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLL 183 (313)
Q Consensus 104 ~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~lv 183 (313)
.. |.+++|+.-...+..|.|..+.++|.+|+..... +.|..++.+++.+.+....++++|
T Consensus 81 ~~---~~i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~-----------------p~v~~~~~~~~~~~~~~~~~~~~v 140 (361)
T 3uem_A 81 DK---DGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQL-----------------PLVIEFTEQTAPKIFGGEIKTHIL 140 (361)
T ss_dssp SS---SEEEEEESSTTSEEECCSCCCHHHHHHHHHHHSS-----------------CSEEECSTTTHHHHHSCSCCEEEE
T ss_pred CC---CeEEEEEecCCCccccCCcCCHHHHHHHHHHcCC-----------------CcceecCcccHHHHhcCCCCcEEE
Confidence 63 6777777644456788999999999999999754 568899999999988666678899
Q ss_pred EEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC--ccc--ccCCCCc--CceEEEEeCCCCCcCceeec---cC
Q 021368 184 EIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT--NEH--HRAKSDG--FPTILFFPAGNKSFDPINVD---VD 254 (313)
Q Consensus 184 ~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~--~~~--~~~~v~~--~P~i~~~~~g~~~~~~~~y~---g~ 254 (313)
+||++||++|+.+.+.|.++|..+++ .+.|+.+|++. +.. +.|++.+ +|++++|..+.... .|. |.
T Consensus 141 ~F~~~~~~~~~~~~~~~~~~A~~~~~--~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~---ky~~~~~~ 215 (361)
T 3uem_A 141 LFLPKSVSDYDGKLSNFKTAAESFKG--KILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMT---KYKPESEE 215 (361)
T ss_dssp EECCSSSSSHHHHHHHHHHHHGGGTT--TCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CC---EECCSSCC
T ss_pred EEEeCCchhHHHHHHHHHHHHHHccC--ceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCccc---ccCCCccc
Confidence 99999999999999999999999987 69999999983 333 7899987 99999998865432 565 78
Q ss_pred cCHHHHHHHHHhcCCCCc
Q 021368 255 RTVVALYKFLKKNASIPF 272 (313)
Q Consensus 255 ~~~~~l~~fi~~~~~~~~ 272 (313)
.+.+.|.+|+.+.+....
T Consensus 216 ~~~~~l~~fi~~~l~g~~ 233 (361)
T 3uem_A 216 LTAERITEFCHRFLEGKI 233 (361)
T ss_dssp CCHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHhcCCC
Confidence 999999999999876443
No 17
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.82 E-value=4.6e-20 Score=142.23 Aligned_cols=127 Identities=21% Similarity=0.333 Sum_probs=112.2
Q ss_pred cCCCceEEeCCCcccccccCCCccEEEEEeeCCchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 29 NKLPLVTIFTRENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 29 ~~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
++.|++.++|.++|++++....+.+|.||++|++|+.+.|.++++|.+|.|++.|++||.++ ++.+++.|||++...
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~---~~~~a~~~gi~~~~i 79 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA---FGAHAGNLNLKTDKF 79 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT---TGGGTTTTTCCSSSS
T ss_pred cccCceeccChHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH---hHHHHHHcCCCcccC
Confidence 56889999999999998887778888899888999999999999999999999999999987 678999999998223
Q ss_pred cEEEEEcCCCCceeccC--CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 021368 109 KVLAYTGNDDAKKHILD--GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 158 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~--g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~ 158 (313)
|+++++..+.+..+.+. |..+.+.|.+|+.+++.|+++++++|+++|+.+
T Consensus 80 Ptl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~~ 131 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQ 131 (133)
T ss_dssp SEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTTS
T ss_pred CEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCcC
Confidence 99999986333446665 999999999999999999999999999999864
No 18
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.82 E-value=3.9e-19 Score=166.96 Aligned_cols=201 Identities=15% Similarity=0.150 Sum_probs=160.7
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
.+.|..||.++|+..+..+..++|.||++| ++|+.+.|.|.++|..+++. +.|+.|||+. ++.+|++|||+++
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~-- 87 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE---NQDLCMEHNIPGF-- 87 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT---CHHHHHHTTCCSS--
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC---CHHHHHhcCCCcC--
Confidence 356899999999999988888999999999 99999999999999999985 9999999999 6699999999999
Q ss_pred cEEEEEcCCCCc-eeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCC-CcEEEEEe
Q 021368 109 KVLAYTGNDDAK-KHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDES-KDVLLEIY 186 (313)
Q Consensus 109 P~i~~~~~~~~~-~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~-k~~lv~fy 186 (313)
|++++|++|... ...|.|.++.+.|.+|+.+.++ ..+..++. +++++.... ...+|.|+
T Consensus 88 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~-----------------~~v~~i~~--~~~~~~~~~~~~~~v~~f 148 (504)
T 2b5e_A 88 PSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQ-----------------PAVAVVAD--LPAYLANETFVTPVIVQS 148 (504)
T ss_dssp SEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTS-----------------CSEEECSC--HHHHHHHSCCSSCEEEEE
T ss_pred CEEEEEeCCccccceeecCCCCHHHHHHHHHHhcC-----------------CcceeHHH--HHHHHhcCCCceEEEEEe
Confidence 999999887532 6788999999999999999876 44667766 888775544 14455555
Q ss_pred CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceEEEEeCCCCCcCceeeccC-c---CHHHHHH
Q 021368 187 APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVD-R---TVVALYK 262 (313)
Q Consensus 187 ~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~-~---~~~~l~~ 262 (313)
.+.. ......|..+|..++. .+.|+.++ ...+.+++. +++|+... .++.|.|. . +.+.|.+
T Consensus 149 ~~~~---~~~~~~f~~~A~~~~~--~~~F~~~~---~~~~~~~~~----i~l~~~~~---~~~~~~g~~~~~~~~~~l~~ 213 (504)
T 2b5e_A 149 GKID---ADFNATFYSMANKHFN--DYDFVSAE---NADDDFKLS----IYLPSAMD---EPVVYNGKKADIADADVFEK 213 (504)
T ss_dssp ESCC---HHHHHHHHHHHHHTTT--TCEEEEEE---CTTSCCEEE----EEETTEEE---EEEECCSCHHHHTSHHHHHH
T ss_pred CCCC---chHHHHHHHHHHHhhc--CcEEEEEH---HHHHhcCCe----EEecCCCC---cccccCCcccccCCHHHHHH
Confidence 5443 4567789999999987 67888777 223555554 66665422 34578897 6 8999999
Q ss_pred HHHhcCCC
Q 021368 263 FLKKNASI 270 (313)
Q Consensus 263 fi~~~~~~ 270 (313)
||..+.-+
T Consensus 214 fi~~~~~p 221 (504)
T 2b5e_A 214 WLQVEALP 221 (504)
T ss_dssp HHHHHSSC
T ss_pred HHHhcccC
Confidence 99987644
No 19
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.82 E-value=8.3e-19 Score=157.19 Aligned_cols=236 Identities=14% Similarity=0.113 Sum_probs=187.1
Q ss_pred CCcccccCCCCCCHHHHHHHHHhcCCCceEEeC-CCccccccc-CCCccEEEEEeeCCchhhhhHHHHHHHHhccCeEEE
Q 021368 6 TEKISYFADGKFDKSTIADFVFSNKLPLVTIFT-RENAPSVFE-SPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIF 83 (313)
Q Consensus 6 ~~~~~~y~~g~~~~~~l~~fi~~~~~~~v~~lt-~~~~~~~~~-~~~~~~v~f~~~~~~c~~~~~~~~~~a~~~~~~v~f 83 (313)
++....| .|..+..+|..|+.....+.+.+++ .++++.+.. ....++|.||.++ |....+.|.++|..+.+.+.|
T Consensus 98 ~g~~~~~-~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~--~~~~~~~~~~~A~~~~~~~~f 174 (350)
T 1sji_A 98 GDRTIEF-DGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSE--ESEYYKAFEEAAEHFQPYIKF 174 (350)
T ss_dssp TTEEEEE-CSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCT--TSHHHHHHHHHHHHTTTTSEE
T ss_pred CCcEEEe-cCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCC--CcHHHHHHHHHHHhhccCcEE
Confidence 4457789 9999999999999999999999996 467777765 5556777788774 677789999999999888999
Q ss_pred EEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCe
Q 021368 84 VYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGE-LTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDV 162 (313)
Q Consensus 84 ~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~-~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v 162 (313)
+.++. ..+|+++||. + |++++++.....+..|.|. ++.++|.+|+.+... +.|
T Consensus 175 ~~~~~------~~~~~~~~v~-~--p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-----------------p~v 228 (350)
T 1sji_A 175 FATFD------KGVAKKLSLK-M--NEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQR-----------------PTL 228 (350)
T ss_dssp EEECC------HHHHHHHTCC-T--TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCC-----------------CSE
T ss_pred EEECC------HHHHHHcCCC-C--CcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCc-----------------cch
Confidence 98853 4799999998 6 9998998755556778887 999999999998643 468
Q ss_pred EEEcCcChHHHhhcCC-CcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------ccCCCC-cCc
Q 021368 163 KIVVGNNFDEIVLDES-KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSD-GFP 234 (313)
Q Consensus 163 ~~l~~~~f~~~l~~~~-k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------~~~~v~-~~P 234 (313)
..++.+++.++..... +..++.|+.++|+.|..+.+.+.++|.++++...+.|+.+|+..... ..+++. ++|
T Consensus 229 ~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P 308 (350)
T 1sji_A 229 RRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKP 308 (350)
T ss_dssp EECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSC
T ss_pred hhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCC
Confidence 8999999998764322 44566699999999999999999999999854468899999987654 347776 589
Q ss_pred eEEEEeCCCCCcCcee-e---ccCcCHHHHHHHHHhcCCCC
Q 021368 235 TILFFPAGNKSFDPIN-V---DVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~-y---~g~~~~~~l~~fi~~~~~~~ 271 (313)
+++++...+.. +... + .|..+.+.|.+|+++.+.-+
T Consensus 309 ~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~F~~d~~~Gk 348 (350)
T 1sji_A 309 QIGVVNVTDAD-SVWMEIPDDDDLPTAEELEDWIEDVLSGK 348 (350)
T ss_dssp EEEEEESSSSC-EEESCSSCCSCCCCHHHHHHHHHHHHTSC
T ss_pred cEEEEeccccc-ccccCCCcccccCCHHHHHHHHHHHhcCc
Confidence 99999763331 1111 2 35789999999999987544
No 20
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.81 E-value=1.4e-18 Score=147.79 Aligned_cols=219 Identities=13% Similarity=0.127 Sum_probs=158.4
Q ss_pred CCceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccC---eEEEEEEeCCCcccccchhhhhCCCC
Q 021368 31 LPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG---KLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~---~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
.+.|..|+.++|+..+ ..+..++|.||++| ++|+++.|.|.+++.++.+ .+.|+.|||+... ++.+|++|||.+
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~-~~~l~~~~~v~~ 89 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET-NSAVCRDFNIPG 89 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT-THHHHHHTTCCS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh-hHHHHHHcCCCc
Confidence 4578999999999865 44478888999999 9999999999999999997 7999999996544 789999999999
Q ss_pred CCCcEEEEEcCCCC----ceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcC-CCc
Q 021368 106 EAPKVLAYTGNDDA----KKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDE-SKD 180 (313)
Q Consensus 106 ~~~P~i~~~~~~~~----~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~-~k~ 180 (313)
+ |++++++.+.. ..+.+.| .+.+.|.+++.+.+..... ..|.. ...+..++..++..++... .++
T Consensus 90 ~--Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~------~~p~~-~p~l~~~~~~~l~~~~~~~~~~~ 159 (244)
T 3q6o_A 90 F--PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHD------TWPPA-CPPLEPAXLEEIDGFFARNNEEY 159 (244)
T ss_dssp S--SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTT------SCCTT-SCCCSCCCHHHHHTHHHHCCCSE
T ss_pred c--CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccc------cCCCC-CCCcccccHHHHHHHhhcCCCce
Confidence 9 99999987442 2334556 7999999999999874332 11111 1223345566777766443 456
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-ccCCCCcCceEEEEeCCCCCcCceeecc-CcCHH
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-HRAKSDGFPTILFFPAGNKSFDPINVDV-DRTVV 258 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-~~~~v~~~P~i~~~~~g~~~~~~~~y~g-~~~~~ 258 (313)
..+.|....|. ...+++..+.....+.+..++-..... .+|+|+++|++++|..+... ..++. ..+.+
T Consensus 160 ~al~f~~~~~~-------~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~~---~~~~~~~~~r~ 229 (244)
T 3q6o_A 160 LALIFEXGGSY-------LAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSV---SRVPVLMESRS 229 (244)
T ss_dssp EEEEEECTTCC-------HHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCE---EECCCSSSSHH
T ss_pred EEEEEEECCcc-------hHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCCe---EeeccccccHH
Confidence 66777766533 445566666655578888877543333 89999999999998765543 25654 55778
Q ss_pred HHHHHHHhcCCC
Q 021368 259 ALYKFLKKNASI 270 (313)
Q Consensus 259 ~l~~fi~~~~~~ 270 (313)
.+..+|++..+.
T Consensus 230 ~~~~~l~~~~~~ 241 (244)
T 3q6o_A 230 FYTAYLQRLSGL 241 (244)
T ss_dssp HHHHHHHTC---
T ss_pred HHHHHHHhCCCC
Confidence 888888877654
No 21
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=2.5e-19 Score=137.78 Aligned_cols=113 Identities=49% Similarity=0.935 Sum_probs=98.8
Q ss_pred CCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCce
Q 021368 158 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPT 235 (313)
Q Consensus 158 ~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~ 235 (313)
+.+.|..++.++|.+.+.+.+++++|+||++||++|+.+.+.|.+++..+.....+.++.+|++.+.. .+|++.++|+
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 35679999999999988766899999999999999999999999999999864479999999998876 6799999999
Q ss_pred EEEEeCCCCCcCceeec-cCcCHHHHHHHHHhcCCCC
Q 021368 236 ILFFPAGNKSFDPINVD-VDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 236 i~~~~~g~~~~~~~~y~-g~~~~~~l~~fi~~~~~~~ 271 (313)
+++|.+|..+ .++.|. |..+.+.|.+||.+++...
T Consensus 85 ~~~~~~g~~~-~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 85 IYFAPSGDKK-NPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp EEEECTTCTT-SCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EEEEeCCCcc-cceEecCCCcCHHHHHHHHHHhcccc
Confidence 9999988766 455788 4589999999999998654
No 22
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.80 E-value=6.2e-19 Score=133.25 Aligned_cols=115 Identities=46% Similarity=0.867 Sum_probs=98.5
Q ss_pred CCCCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcC---CCcEEEEEEeCCCcccccCCCC
Q 021368 155 PETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNEHHRAKSD 231 (313)
Q Consensus 155 ~~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~---~~~v~~~~vd~~~~~~~~~~v~ 231 (313)
|+...+.|..+++++|.+.+...+++++|+||++||++|+.+.+.|.+++..+.+ ...+.++.+|++.+.... ++.
T Consensus 2 p~~~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~ 80 (121)
T 2djj_A 2 PLGSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQ 80 (121)
T ss_dssp CCCCSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCS
T ss_pred CccCCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccC
Confidence 3345578999999999998767789999999999999999999999999999976 236999999999887655 999
Q ss_pred cCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCC
Q 021368 232 GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 232 ~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 271 (313)
++|++++|++|..+ ....|.|..+.+.|.+||.+++...
T Consensus 81 ~~Pt~~~~~~~~~~-~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 81 GFPTIKLYPAGAKG-QPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSSEEEEECSSCTT-SCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred cCCeEEEEeCcCCC-CceEecCCCCHHHHHHHHHhccCcC
Confidence 99999999888652 2348999999999999999997644
No 23
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.79 E-value=6.5e-18 Score=157.95 Aligned_cols=222 Identities=13% Similarity=0.125 Sum_probs=161.7
Q ss_pred CCceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccC---eEEEEEEeCCCcccccchhhhhCCCC
Q 021368 31 LPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG---KLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~---~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
...|..++.++|+..+ ..+..++|.||++| ++|+.+.|.|++++.++.+ .+.|+.|||+.+. ++.+|++|||.+
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~-~~~l~~~~~V~~ 89 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET-NSAVCREFNIAG 89 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG-GHHHHHHTTCCS
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc-cHHHHHHcCCcc
Confidence 3468899999999865 45567888999999 9999999999999999997 7999999997644 779999999999
Q ss_pred CCCcEEEEEcCCCC---ceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcC-CCcE
Q 021368 106 EAPKVLAYTGNDDA---KKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDE-SKDV 181 (313)
Q Consensus 106 ~~~P~i~~~~~~~~---~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~-~k~~ 181 (313)
+ |++++|+.+.. ....+.|.++.+.|.+++.+.+..... ..|. ....+..++.+++..++... .+++
T Consensus 90 ~--PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~------~~P~-~~p~l~~it~~~l~~~l~~~~~~~v 160 (519)
T 3t58_A 90 F--PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRD------TWPP-ACPPLEPAKLNDIDGFFTRNKADYL 160 (519)
T ss_dssp B--SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCS------CCCT-TCCCCSBCCHHHHTTGGGSCCCSEE
T ss_pred c--CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccc------cCCC-CCCccCcCCHHHHHHHhccCCCCeE
Confidence 9 99999986431 234456779999999999999874331 1111 12234456667777766443 4567
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-ccCCCCcCceEEEEeCCCCCcCceeecc-CcCHHH
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-HRAKSDGFPTILFFPAGNKSFDPINVDV-DRTVVA 259 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-~~~~v~~~P~i~~~~~g~~~~~~~~y~g-~~~~~~ 259 (313)
+|.|.... ......++..+.....+.+..++-..... .+|+|+.+|+++++..+.+.. .+.. ......
T Consensus 161 allF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~---~~~v~~~~r~~ 230 (519)
T 3t58_A 161 ALVFERED-------SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVS---RVPVLVESRSF 230 (519)
T ss_dssp EEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEE---ECCCSSCSHHH
T ss_pred EEEecCCc-------hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCcee---ecccccccHHH
Confidence 77777654 22567777777766678888776543333 899999999999997766532 3443 234566
Q ss_pred HHHHHHhcCCCCc
Q 021368 260 LYKFLKKNASIPF 272 (313)
Q Consensus 260 l~~fi~~~~~~~~ 272 (313)
+..++.+..+...
T Consensus 231 ~~~~l~~l~~~~~ 243 (519)
T 3t58_A 231 YTSYLRGLPGLTR 243 (519)
T ss_dssp HHHHHTTSTTCCC
T ss_pred HHHHHHHccCCCC
Confidence 7778776555443
No 24
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.78 E-value=5.2e-19 Score=130.37 Aligned_cols=98 Identities=26% Similarity=0.501 Sum_probs=84.7
Q ss_pred EEEc-CcChHHHhhcC-CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEE
Q 021368 163 KIVV-GNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 238 (313)
Q Consensus 163 ~~l~-~~~f~~~l~~~-~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~ 238 (313)
..++ .++|++.+.+. +++++|.|||+||++|+.+.|.|.+++..+. ++.|+.+|++.+.. .+|+|.++||+++
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~~l~~~~~V~~~PT~~~ 79 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECEDIAQDNQIACMPTFLF 79 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHHTTCCBSSEEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCHHHHHHcCCCeecEEEE
Confidence 3443 46888888643 6899999999999999999999999999875 48999999998876 7999999999999
Q ss_pred EeCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 239 FPAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 239 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
|++|..+. ++.| .+.+.|.+||++|
T Consensus 80 ~~~G~~v~---~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 80 MKNGQKLD---SLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EETTEEEE---EEES-CCHHHHHHHHHHH
T ss_pred EECCEEEE---EEeC-cCHHHHHHHHHhc
Confidence 99998875 7888 5889999999886
No 25
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.78 E-value=1.2e-18 Score=139.23 Aligned_cols=121 Identities=17% Similarity=0.243 Sum_probs=100.9
Q ss_pred CCeEEEcCcChHHHhhcC-CCcEEEEEeC-------CCCccchhhhHHHHHHHHHhcCC---CcEEEEEEeCCCccc--c
Q 021368 160 GDVKIVVGNNFDEIVLDE-SKDVLLEIYA-------PWCGHCQAFEPTYNKLAKHLRGV---DSIVIAKMDGTTNEH--H 226 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~-~k~~lv~fy~-------~~C~~C~~~~~~~~~la~~~~~~---~~v~~~~vd~~~~~~--~ 226 (313)
+.|..|++++|++.+... +.+++|+||| +||++|+.+.|+|+++|..+.+. .++.|+++|++.+.. .
T Consensus 18 ~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~ 97 (178)
T 3ga4_A 18 TGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVK 97 (178)
T ss_dssp TSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHH
T ss_pred CCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHH
Confidence 568999999999987543 5679999999 49999999999999999998611 379999999999876 7
Q ss_pred cCCCCcCceEEEEeCCCCCc---------Cceee---cc-CcCHHHHHHHHHhcCCCCccccCCCCC
Q 021368 227 RAKSDGFPTILFFPAGNKSF---------DPINV---DV-DRTVVALYKFLKKNASIPFKIQKPTSA 280 (313)
Q Consensus 227 ~~~v~~~P~i~~~~~g~~~~---------~~~~y---~g-~~~~~~l~~fi~~~~~~~~~~~~~~~~ 280 (313)
+|+|.++||+++|++|.... .+..| .| ..+++.|.+||.+.++..+.+.+|..-
T Consensus 98 ~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny 164 (178)
T 3ga4_A 98 DLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNV 164 (178)
T ss_dssp HTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC-
T ss_pred HcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCCh
Confidence 99999999999999987532 23456 35 789999999999999988887776543
No 26
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.77 E-value=5.4e-18 Score=152.77 Aligned_cols=239 Identities=12% Similarity=0.099 Sum_probs=190.5
Q ss_pred CCcccccCCCCCCHHHHHHHHHhcCCCceEEeCC-Cccccccc-CCCccEEEEEeeCCchhhhhHHHHHHHHhccCeEEE
Q 021368 6 TEKISYFADGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFE-SPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIF 83 (313)
Q Consensus 6 ~~~~~~y~~g~~~~~~l~~fi~~~~~~~v~~lt~-~~~~~~~~-~~~~~~v~f~~~~~~c~~~~~~~~~~a~~~~~~v~f 83 (313)
++..+.| .|..+...|..||.....+.+..++. ++++.+.. ....++|.||.+ .|....+.|.++|..+.+.+.|
T Consensus 100 ~G~~~~y-~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~--~~~~~~~~f~~~A~~~~~~~~F 176 (367)
T 3us3_A 100 EDEVIEY-DGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKN--KDSEHYKAFKEAAEEFHPYIPF 176 (367)
T ss_dssp TTEEEEC-CSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSC--TTCHHHHHHHHHHHHHTTTSCE
T ss_pred CCcEEEe-CCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECC--CCchHHHHHHHHHHhhcCCcEE
Confidence 4567899 99999999999999999999999964 67887776 455677778877 4778889999999999988999
Q ss_pred EEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCe
Q 021368 84 VYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGE-LTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDV 162 (313)
Q Consensus 84 ~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~-~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v 162 (313)
+.+.. ..+++++||. . |+|++|+.....+..|.|. ++.++|.+||....- +.|
T Consensus 177 ~~~~~------~~~~~~~~v~-~--p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-----------------p~v 230 (367)
T 3us3_A 177 FATFD------SKVAKKLTLK-L--NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRR-----------------STL 230 (367)
T ss_dssp EEECC------HHHHHHHTCC-T--TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCS-----------------CSE
T ss_pred EEECC------HHHHHHcCCC-C--CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCc-----------------cce
Confidence 98764 3789999996 3 8888998755567788885 999999999998643 468
Q ss_pred EEEcCcChHHHhhcC-CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccc------cCCCC-cCc
Q 021368 163 KIVVGNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHH------RAKSD-GFP 234 (313)
Q Consensus 163 ~~l~~~~f~~~l~~~-~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~------~~~v~-~~P 234 (313)
..++.+++.+...+. .++.++.|+..+|..|..+...+..+|..+++...+.|+.+|+...... .|++. .+|
T Consensus 231 ~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P 310 (367)
T 3us3_A 231 RKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAP 310 (367)
T ss_dssp EECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSC
T ss_pred eecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCC
Confidence 899999998876543 4567788999999999999999999999999754599999999987642 27776 899
Q ss_pred eEEEEeCCCCCcCceeecc---CcCHHHHHHHHHhcCCCCcc
Q 021368 235 TILFFPAGNKSFDPINVDV---DRTVVALYKFLKKNASIPFK 273 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~y~g---~~~~~~l~~fi~~~~~~~~~ 273 (313)
+++++...........+.+ ..+.+.|.+|+++.+.-+++
T Consensus 311 ~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~ 352 (367)
T 3us3_A 311 QIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEIN 352 (367)
T ss_dssp EEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSC
T ss_pred eEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcC
Confidence 9999976543101112443 68999999999998765444
No 27
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.76 E-value=4.2e-18 Score=125.92 Aligned_cols=104 Identities=25% Similarity=0.506 Sum_probs=93.5
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.|..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ .+.++.+|++.+.. .++++.++|+++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 79 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHHTTCCSSSEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 46889999999988877889999999999999999999999999999876 69999999998775 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+|++|+.+. .+.|..+.+.|.+||++.+
T Consensus 80 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 80 LFKNGEVAA---TKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEE---EEecCCCHHHHHHHHHHhh
Confidence 998887654 7889899999999998864
No 28
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.76 E-value=7.4e-18 Score=125.70 Aligned_cols=103 Identities=20% Similarity=0.341 Sum_probs=92.9
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEE
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 239 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~ 239 (313)
|..++.++|++.+ .+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+.. .++++.++|++++|
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 6788999999988 789999999999999999999999999999976 69999999998875 78999999999999
Q ss_pred eCCCCCcCceeeccCcCHHHHHHHHHhcCCCC
Q 021368 240 PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 240 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 271 (313)
++|+.+. .+.|..+.+.|.+|+.++++.+
T Consensus 79 ~~G~~~~---~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 79 KDGEVVE---TSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHHHTTSCSC
T ss_pred eCCEEEE---EEeCCCCHHHHHHHHHHHHHhh
Confidence 8887654 7899999999999999997644
No 29
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.76 E-value=2e-18 Score=128.31 Aligned_cols=104 Identities=20% Similarity=0.306 Sum_probs=94.6
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
..|..++.++|.+.+.+.+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+.. ..+++.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 45888999999999977889999999999999999999999999999876 69999999998875 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+|++|..+. ++.|..+.+.|.+||++.+
T Consensus 82 ~~~~g~~~~---~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 82 YFKDGEYKG---KMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EEETTEEEE---EEESSCCHHHHHHHHHHHH
T ss_pred EEECCEEEE---EEeccCCHHHHHHHHHHHh
Confidence 999888764 7899999999999999875
No 30
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.75 E-value=3.3e-17 Score=137.82 Aligned_cols=202 Identities=15% Similarity=0.096 Sum_probs=158.5
Q ss_pred EEe-CCCcccccccCCCccEEEEEeeCCchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEE
Q 021368 35 TIF-TRENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAY 113 (313)
Q Consensus 35 ~~l-t~~~~~~~~~~~~~~~v~f~~~~~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~ 113 (313)
.+| +.+++++++.....++|.||.+| |..+.+.|.++|..+. .+.|+... +..+|+++++. .|+|++
T Consensus 12 ~~l~s~~~~~~~l~~~~v~vVgff~~~--~~~~~~~f~~~A~~l~-~~~F~~t~------~~~v~~~~~v~---~p~i~l 79 (227)
T 4f9z_D 12 TWLTDVPAAMEFIAATEVAVIGFFQDL--EIPAVPILHSMVQKFP-GVSFGIST------DSEVLTHYNIT---GNTICL 79 (227)
T ss_dssp EECCSHHHHHHHHHTSSEEEEEECSCS--CSTHHHHHHHHTTTCT-TSEEEEEC------CHHHHHHTTCC---SSEEEE
T ss_pred eeeCCHHHHHHHHhcCCeEEEEEecCC--CchhHHHHHHHHHhCC-CceEEEEC------CHHHHHHcCCC---CCeEEE
Confidence 344 45778887777777778899884 8999999999999995 68898753 34899999995 388888
Q ss_pred EcCCCCceeccC----CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCC
Q 021368 114 TGNDDAKKHILD----GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPW 189 (313)
Q Consensus 114 ~~~~~~~~~~~~----g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~ 189 (313)
|+.....+..|. |.++.+.|.+||.+..- +.|..++.+++.++........+++|+.+|
T Consensus 80 fk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~-----------------plv~e~t~~n~~~~~~~~~~~~~l~f~~~~ 142 (227)
T 4f9z_D 80 FRLVDNEQLNLEDEDIESIDATKLSRFIEINSL-----------------HMVTEYNPVTVIGLFNSVIQIHLLLIMNKA 142 (227)
T ss_dssp EETTTTEEEEECHHHHHTCCHHHHHHHHHHHCC-----------------CSEEECCHHHHHHHHHSSCCEEEEEEECTT
T ss_pred EEecCcccccccccccCCCCHHHHHHHHHHhCC-----------------CceeecCcccHHHHhccCCceEEEEEEcCC
Confidence 886544455677 47999999999999743 568899999999887443355667788999
Q ss_pred CccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC--ccc--ccCCCC--cCceEEEEeCCCCCcCceee-ccCcCHHHHHH
Q 021368 190 CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT--NEH--HRAKSD--GFPTILFFPAGNKSFDPINV-DVDRTVVALYK 262 (313)
Q Consensus 190 C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~--~~~--~~~~v~--~~P~i~~~~~g~~~~~~~~y-~g~~~~~~l~~ 262 (313)
|..|..+.+.|.++|+.+++ .+.|+.+|++. +.. ..|++. .+|+++++..+... ...+ .+..+.+.|.+
T Consensus 143 ~~~~~~~~~~~~~vAk~~k~--~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~--ky~~~~~~~t~~~i~~ 218 (227)
T 4f9z_D 143 SPEYEENMHRYQKAAKLFQG--KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDE--WDTLPTAEVSVEHVQN 218 (227)
T ss_dssp STTHHHHHHHHHHHHHHTTT--TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCC--EEEETTCCCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhC--CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCc--cccCCcCCCCHHHHHH
Confidence 99999999999999999998 69999999974 222 678887 89999999865432 1133 36789999999
Q ss_pred HHHhcCC
Q 021368 263 FLKKNAS 269 (313)
Q Consensus 263 fi~~~~~ 269 (313)
|+++.+.
T Consensus 219 Fv~~~~~ 225 (227)
T 4f9z_D 219 FCDGFLS 225 (227)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 9998753
No 31
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.75 E-value=1.2e-17 Score=123.05 Aligned_cols=104 Identities=22% Similarity=0.415 Sum_probs=93.4
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.|..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+.. ..+++.++|+++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPNAYQVRSIPTLM 79 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHHHTTCCSSSEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHHhcCCCccCEEE
Confidence 46889999999988877789999999999999999999999999999976 69999999998775 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+|++|..+. .+.|..+.+.|.+||++++
T Consensus 80 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 80 LVRDGKVID---KKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHTC
T ss_pred EEeCCEEEE---EecCCCCHHHHHHHHHhcC
Confidence 998888754 7889899999999998763
No 32
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.75 E-value=2.2e-18 Score=131.27 Aligned_cols=104 Identities=11% Similarity=0.070 Sum_probs=94.0
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCC--ccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCce
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWC--GHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPT 235 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C--~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~ 235 (313)
.....++.++|++.+.+.+++++|+||++|| ++|+.+.|++.+++..|.+ .+.|+++|++.+.. .+|+|.++||
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~~la~~ygV~siPT 92 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAERGLMARFGVAVCPS 92 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHHHHHHHHTCCSSSE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCccCCE
Confidence 3456899999999997666699999999999 9999999999999999976 79999999998876 7999999999
Q ss_pred EEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 236 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 236 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+++|++|+.+. +..|..+.+.|.+||++++
T Consensus 93 lilFkdG~~v~---~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 93 LAVVQPERTLG---VIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEEECCEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 99999999986 8899999999999999886
No 33
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.75 E-value=9.9e-18 Score=128.17 Aligned_cols=104 Identities=24% Similarity=0.471 Sum_probs=93.5
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.|..++.++|++.+...+++++|+||++||++|+.+.+.|.+++..+.+ ++.++.+|++.+.. ..|++.++|+++
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 99 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 99 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGGGTCCSSSEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 56889999999988877889999999999999999999999999999876 69999999998775 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+|++|+.+. .+.|..+.+.|.+||++.+
T Consensus 100 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 100 LFKNGEVAA---TKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEE---EEcCCCCHHHHHHHHHHhh
Confidence 998887654 7889999999999998864
No 34
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=9.1e-18 Score=130.19 Aligned_cols=110 Identities=33% Similarity=0.664 Sum_probs=96.2
Q ss_pred CCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCC-CcEEEEEEeCCCccc--ccCCCCcCc
Q 021368 158 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKSDGFP 234 (313)
Q Consensus 158 ~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~vd~~~~~~--~~~~v~~~P 234 (313)
....|..++.++|++.+ ..+++++|+||++||++|+.+.+.|.+++..+.+. ..+.++.+|++.+.. .+|++.++|
T Consensus 15 ~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp EETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 35779999999999977 45789999999999999999999999999998763 249999999998765 789999999
Q ss_pred eEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCCc
Q 021368 235 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 272 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~ 272 (313)
++++|++|+ +. .|.|..+.+.|.+||++++....
T Consensus 94 t~~~~~~G~-~~---~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 94 TIKILKKGQ-AV---DYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp EEEEEETTE-EE---ECCSCCCHHHHHHHHHHHHSSSC
T ss_pred eEEEEECCc-EE---EcCCCCCHHHHHHHHHHhcCCCC
Confidence 999998887 42 89999999999999999976544
No 35
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=8.7e-18 Score=129.01 Aligned_cols=108 Identities=33% Similarity=0.586 Sum_probs=95.3
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcC--CCcEEEEEEeCCCccc--ccCCCCcCc
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG--VDSIVIAKMDGTTNEH--HRAKSDGFP 234 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~--~~~v~~~~vd~~~~~~--~~~~v~~~P 234 (313)
...|..++.++|.+.+.+.+++++|+||++||++|+.+.+.|.+++..+.. ...+.++.+|++.+.. .+|++.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 467899999999998877789999999999999999999999999999871 1269999999998765 789999999
Q ss_pred eEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 235 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++++|.+|..+. .|.|..+.+.|.+||.+.+.
T Consensus 86 t~~~~~~g~~~~---~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 86 TIKIFQKGESPV---DYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp EEEEEETTEEEE---EECSCCSHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceE---EecCCCCHHHHHHHHHHHhh
Confidence 999999877543 89999999999999999864
No 36
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.74 E-value=1.1e-17 Score=124.21 Aligned_cols=103 Identities=30% Similarity=0.611 Sum_probs=92.5
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCC-CcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
+.|..++.++|++.+. +++++|+||++||++|+.+.+.|.+++..+... ..+.++.+|++.+.. .++++.++|++
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 5 STVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 5688999999999986 779999999999999999999999999987643 479999999998865 79999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
++|++|+.+. .+.|..+.+.|.+||.++
T Consensus 83 ~~~~~g~~~~---~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGGKKVS---EHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETTEEEE---EECSCCSHHHHHHHHHHH
T ss_pred EEEeCCcEEE---eccCCcCHHHHHHHHHhc
Confidence 9999988754 899999999999999876
No 37
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=1.5e-17 Score=127.19 Aligned_cols=106 Identities=29% Similarity=0.530 Sum_probs=94.7
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
.+.|..++.++|++.+...+++++|+||++||++|+.+.+.|.+++..+.+ .+.++.+|++.+.. .++++.++|++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGGQYGVQGFPTI 93 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHHHcCCCccCEE
Confidence 467899999999998877889999999999999999999999999999876 58999999998865 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|.+|.. ....|.|..+.+.|.+||.+.+
T Consensus 94 ~~~~~~~~--~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 94 KIFGANKN--KPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp EEESSCTT--SCEECCSCCSHHHHHHHHHHHH
T ss_pred EEEeCCCC--eEEEeecCCCHHHHHHHHHHHH
Confidence 99988776 2348999999999999999875
No 38
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.73 E-value=1.8e-17 Score=124.58 Aligned_cols=110 Identities=35% Similarity=0.661 Sum_probs=96.2
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCC-CcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
+.|..++.++|++.+. .+++++|+||++||++|+.+.+.+.+++..++.. ..+.++.+|++.+.. .++++.++|++
T Consensus 7 ~~v~~l~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 7 DHVLVLRKSNFAEALA-AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTI 85 (120)
T ss_dssp TTEEECCTTTHHHHHH-HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEE
T ss_pred CCcEEechhhHHHHHc-cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEE
Confidence 5688999999999774 6789999999999999999999999999998753 369999999998765 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 271 (313)
++|++|+.+ .+..|.|..+.+.|.+||+++++..
T Consensus 86 ~~~~~g~~~-~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 86 KFFRNGDTA-SPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEESSCSS-SCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEeCCCcC-CcccccCccCHHHHHHHHHhccCCC
Confidence 999988865 3458999999999999999987654
No 39
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.73 E-value=9.6e-18 Score=129.80 Aligned_cols=105 Identities=11% Similarity=0.137 Sum_probs=87.8
Q ss_pred eEEEc-CcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 162 VKIVV-GNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 162 v~~l~-~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
|..|+ .++|++.+++ .+++++|.|||+||++|+.+.|.+.++|.++.+ .+.|+++|++.+.. ..|+|.+.||++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPDFNTMYELYDPVSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTTTTCCSSEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 44454 4789988874 678999999999999999999999999999976 69999999999887 799999999999
Q ss_pred EEeCCCCC--c----CceeeccCcC-HHHHHHHHHhcC
Q 021368 238 FFPAGNKS--F----DPINVDVDRT-VVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~g~~~--~----~~~~y~g~~~-~~~l~~fi~~~~ 268 (313)
+|++|+.+ . +.-...|... .+.|.++|..++
T Consensus 101 fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 101 FFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 99999874 0 0014677655 889999998875
No 40
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.73 E-value=1.5e-17 Score=123.77 Aligned_cols=105 Identities=24% Similarity=0.459 Sum_probs=93.7
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.|..++.++|.+.+.+.+++++|+||++||++|+.+.+.+.+++..+.+ .+.++.+|++.+.. .++++.++|+++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 82 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAAKYGVMSIPTLN 82 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHHhCCCCcccEEE
Confidence 45789999999998877789999999999999999999999999999876 59999999998765 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+|++|..+. .+.|..+.+.|.+||++.+.
T Consensus 83 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 83 VYQGGEVAK---TIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHTHHHHC
T ss_pred EEeCCEEEE---EEeCCCCHHHHHHHHHHHhh
Confidence 999887754 78899999999999988753
No 41
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.73 E-value=8.2e-18 Score=126.89 Aligned_cols=107 Identities=24% Similarity=0.420 Sum_probs=95.2
Q ss_pred CCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCc
Q 021368 157 TNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFP 234 (313)
Q Consensus 157 ~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P 234 (313)
.....+..++.++|.+.+.+.+++++|+||++||++|+.+.+.|.+++..+.. .+.++.+|++.+.. .+|++.++|
T Consensus 10 ~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~P 87 (119)
T 1w4v_A 10 HGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAIEYEVSAVP 87 (119)
T ss_dssp CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHHHTTCCSSS
T ss_pred CCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCccc
Confidence 34577889999999998888889999999999999999999999999999876 69999999998765 789999999
Q ss_pred eEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 235 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++++|++|+.+. .+.|..+.+.|.+||++.+
T Consensus 88 t~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMKNGDVVD---KFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEE---EEcCCCCHHHHHHHHHHHh
Confidence 999998887654 7889889999999998864
No 42
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.73 E-value=1.8e-17 Score=121.96 Aligned_cols=101 Identities=27% Similarity=0.387 Sum_probs=91.7
Q ss_pred CeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEE
Q 021368 161 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 238 (313)
Q Consensus 161 ~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~ 238 (313)
.+..++.++|.+.+ .+++++|+||++||++|+.+.+.+.+++..+.+ .+.++.+|++.+.. ..+++.++|++++
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAKYEVMSIPTLIV 79 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHhCCCcccCEEEE
Confidence 57889999999988 789999999999999999999999999999986 59999999998875 7899999999999
Q ss_pred EeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 239 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 239 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
|++|+.+. .+.|..+.+.|.+||++++
T Consensus 80 ~~~G~~~~---~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 80 FKDGQPVD---KVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EETTEEEE---EEESCCCHHHHHHHHHTTC
T ss_pred EeCCeEEE---EEeCCCCHHHHHHHHHHhC
Confidence 99887764 7899999999999998764
No 43
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=3.9e-17 Score=126.03 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=92.2
Q ss_pred CCCeEEEcCcChHHHhhcC--CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDE--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~--~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i 236 (313)
.+.|..++.++|.+.+... +++++|+||++||++|+.+.|.|.+++..+. .+.|+.+|++.+. .+|+|.++||+
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~-~~~~i~~~Pt~ 84 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI-EHYHDNCLPTI 84 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC-SSCCSSCCSEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc-ccCCCCCCCEE
Confidence 3668889999999988654 3689999999999999999999999999874 5999999998764 78999999999
Q ss_pred EEEeCCCCCcCceeeccCc-------CHHHHHHHHHhcCCCCccc
Q 021368 237 LFFPAGNKSFDPINVDVDR-------TVVALYKFLKKNASIPFKI 274 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~-------~~~~l~~fi~~~~~~~~~~ 274 (313)
++|++|+.+. ++.|.. +.+.|.++|.++...+.+.
T Consensus 85 ~~~~~G~~v~---~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~~~ 126 (135)
T 2dbc_A 85 FVYKNGQIEG---KFIGIIECGGINLKLEELEWKLSEVGAIQSDL 126 (135)
T ss_dssp EEESSSSCSE---EEESTTTTTCTTCCHHHHHHHHHHHTSSCCCS
T ss_pred EEEECCEEEE---EEEeEEeeCCCcCCHHHHHHHHHHcCCccccc
Confidence 9999998775 666643 7899999999997655443
No 44
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=124.07 Aligned_cols=103 Identities=16% Similarity=0.221 Sum_probs=88.6
Q ss_pred CCeEEEcCcChHHHhhcCCC--cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESK--DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k--~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i~ 237 (313)
+.|..++.++|.+.+.+.++ +++|+||++||++|+.+.|.+.++|.++. ++.|+++|++.. ..+|+|.++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~-~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC-IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT-STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh-HHHCCCCCCCEEE
Confidence 46788999999998876554 89999999999999999999999999885 489999999876 5889999999999
Q ss_pred EEeCCCCCcCceeecc-------CcCHHHHHHHHHhcCC
Q 021368 238 FFPAGNKSFDPINVDV-------DRTVVALYKFLKKNAS 269 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g-------~~~~~~l~~fi~~~~~ 269 (313)
+|++|..+. ++.| ..+.+.|..+|.+..-
T Consensus 79 ~fk~G~~v~---~~~G~~~~gg~~~~~~~le~~L~~~g~ 114 (118)
T 3evi_A 79 VYKNGQIEA---KFIGIIECGGINLKLEELEWKLAEVGA 114 (118)
T ss_dssp EEETTEEEE---EEESTTTTTCSSCCHHHHHHHHHTTTS
T ss_pred EEECCEEEE---EEeChhhhCCCCCCHHHHHHHHHHcCC
Confidence 999999876 5555 3478999999987654
No 45
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.72 E-value=2.7e-17 Score=121.54 Aligned_cols=103 Identities=25% Similarity=0.467 Sum_probs=93.1
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.|..++.++|++.+. .+++++|+||++||++|+.+.+.+.+++..+.+ .+.++.+|++.+.. ..+++.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 4 DVTLVLTEENFDEVIR-NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CCCEECCTTTHHHHHH-HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeEEEecHHHHHHHHh-cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHHhcCcccCCEEE
Confidence 5678899999999884 589999999999999999999999999999986 69999999998865 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+|++|..+. .+.|..+.+.|.+||++.+
T Consensus 81 ~~~~g~~~~---~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVD---SLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEE---eeeccCCHHHHHHHHHHHh
Confidence 998888764 7999999999999999875
No 46
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.72 E-value=2.4e-17 Score=123.07 Aligned_cols=105 Identities=22% Similarity=0.392 Sum_probs=94.4
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.|..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ .+.++.+|++.+.. .++++.++|+++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~ 84 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVKKYKVEGVPALR 84 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHHHTTCCSSSEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHHHcCCCceeEEE
Confidence 56889999999998877889999999999999999999999999999876 59999999998765 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+|++|..+. .+.|..+.+.|.+||.+.++
T Consensus 85 ~~~~G~~~~---~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 85 LVKGEQILD---STEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHHC
T ss_pred EEcCCEEEE---EecCCCCHHHHHHHHHHHhc
Confidence 998887654 78898999999999998764
No 47
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.72 E-value=3.7e-17 Score=126.30 Aligned_cols=108 Identities=25% Similarity=0.422 Sum_probs=94.0
Q ss_pred CCCeEEEcCcChHHHhhc-----------CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--
Q 021368 159 DGDVKIVVGNNFDEIVLD-----------ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-- 225 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~-----------~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-- 225 (313)
...|..++.++|.+.+.+ .+++++|+||++||++|+.+.+.|.+++..+.+ .+.++.+|++.+..
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~ 85 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQELA 85 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHH
Confidence 457889999999998864 468999999999999999999999999999876 59999999998765
Q ss_pred ccCCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCCCCc
Q 021368 226 HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 272 (313)
Q Consensus 226 ~~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~ 272 (313)
.+|++.++|++++| ++|..+ .+.|..+.+.|.+||.+.++...
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~~~----~~~G~~~~~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGKPE----MAQGAMPKASFKKAIDEFLLKKE 129 (136)
T ss_dssp HHTTCCSSCEEEEECSSSCCE----EEESCCCHHHHHHHHHHHHTSCT
T ss_pred HHcCCCCCCEEEEECCCCcEE----EEeCCCCHHHHHHHHHHHhhccC
Confidence 78999999999999 666653 68899999999999999975443
No 48
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.72 E-value=9.7e-18 Score=130.27 Aligned_cols=107 Identities=22% Similarity=0.333 Sum_probs=96.6
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
...|..++.++|.+.+...+++++|+||++||++|+.+.+.|.+++..+.+ .+.|+.+|++.+.. ..|++.++|++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 356899999999977777899999999999999999999999999999987 69999999998865 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
++|++|..+. .+.|..+.+.|.+||.+.+..
T Consensus 83 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 83 KFFCHGRPVW---EQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEEETTEEEE---EEESSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCcEEE---EEcCCCCHHHHHHHHHHHhcc
Confidence 9999888764 899999999999999998754
No 49
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.72 E-value=2.1e-17 Score=121.89 Aligned_cols=102 Identities=23% Similarity=0.478 Sum_probs=91.5
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEE
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 239 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~ 239 (313)
|..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ .+.++.+|++.+.. .++++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 678999999998877789999999999999999999999999999876 59999999998765 78999999999999
Q ss_pred eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 240 PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 240 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|..+. .+.|..+.+.|.++|++.+
T Consensus 81 ~~G~~~~---~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 81 KGGKKCE---TIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSSEEE---EEESCCCHHHHHHHHHHHC
T ss_pred eCCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 8887654 7889899999999998875
No 50
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=3.8e-17 Score=124.40 Aligned_cols=108 Identities=26% Similarity=0.490 Sum_probs=92.3
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
.+.|..++.++|++.+. +.++|+||++||++|+.+.+.|.+++..+.+. ++.++.+|++.+.. .+|++.++|++
T Consensus 6 ~~~v~~l~~~~f~~~~~---~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELLE---GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL-EVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHTS---SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHhC---CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC-CeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 46789999999998763 23999999999999999999999999998742 58999999998875 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCCccc
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKI 274 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~ 274 (313)
++|++|.. ..|.|..+.+.|.+||.+.+......
T Consensus 82 ~~~~~G~~----~~~~G~~~~~~l~~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 82 YHCKDGEF----RRYQGPRTKKDFINFISDKEWKSIEP 115 (126)
T ss_dssp EEEETTEE----EECCSCCCHHHHHHHHHTCGGGGSCE
T ss_pred EEEeCCeE----EEeecCCCHHHHHHHHHHHhhccCCC
Confidence 99988763 28999999999999999987554443
No 51
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.72 E-value=5.4e-17 Score=136.06 Aligned_cols=111 Identities=23% Similarity=0.461 Sum_probs=99.2
Q ss_pred CCCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcC
Q 021368 156 ETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGF 233 (313)
Q Consensus 156 ~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~ 233 (313)
....+.+..++.++|++.+.+.+++++|+||++||++|+.+.+.|.+++..+++ .+.++.+|++.+.. .+|+|.++
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~ 85 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGI 85 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGGGTCCSB
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHHcCCCcC
Confidence 344678899999999998878899999999999999999999999999999986 59999999998865 78999999
Q ss_pred ceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCC
Q 021368 234 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 234 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 271 (313)
|++++|++|+.+. .+.|..+.+.|.+||.+.+...
T Consensus 86 Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 86 PTLLLFKNGEVAA---TKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp SEEEEEETTEEEE---EEESCCCHHHHHHHHHHHSCCS
T ss_pred CEEEEEECCeEEE---EeccccChHHHHHHHHhhcccc
Confidence 9999999888764 8899999999999999998643
No 52
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.72 E-value=3.5e-17 Score=120.15 Aligned_cols=102 Identities=26% Similarity=0.524 Sum_probs=91.1
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEE
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 239 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~ 239 (313)
|..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ .+.++.+|++.+.. .++++.++|++++|
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 567899999998877789999999999999999999999999999876 59999999998765 78999999999999
Q ss_pred eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 240 PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 240 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|..+. .+.|..+.+.|.++|++.+
T Consensus 80 ~~g~~~~---~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 80 KNGERKE---SIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp ETTEEEE---EEEECCCHHHHHHHHHHHC
T ss_pred eCCeEEE---EEecCCCHHHHHHHHHhhC
Confidence 9887754 7889899999999998763
No 53
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.72 E-value=2e-17 Score=125.51 Aligned_cols=105 Identities=25% Similarity=0.504 Sum_probs=88.5
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCc--------------cchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCG--------------HCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH 225 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~--------------~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~ 225 (313)
+.|..++.++|++.+.+.+++++|+||++||+ +|+.+.|.|.+++..+.+ ++.++.+|++.+..
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPG 80 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHH
Confidence 45788999999988877889999999999999 999999999999998876 59999999998875
Q ss_pred --ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 226 --HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 226 --~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
.+|++.++|++++|++|..+. .+.|..+.+.|.+||+++++
T Consensus 81 l~~~~~v~~~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 81 TAPKYGIRGIPTLLLFKNGEVAA---TKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp TGGGGTCCBSSEEEEEESSSEEE---EEESCCCHHHHHHHHTTTCC
T ss_pred HHHHcCCCccCEEEEEECCEEEE---EEeCCCCHHHHHHHHHHHhC
Confidence 789999999999998888764 79999999999999988753
No 54
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.71 E-value=3.4e-17 Score=120.92 Aligned_cols=104 Identities=24% Similarity=0.444 Sum_probs=91.4
Q ss_pred CeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEE
Q 021368 161 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 238 (313)
Q Consensus 161 ~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~ 238 (313)
.|..++.++|.+.+ ..+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+.. .++++.++|++++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 47789999999665 5688999999999999999999999999999986 69999999998875 7899999999999
Q ss_pred EeCCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 239 FPAGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 239 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
|++|+.+. .+.|..+.+.|.+||++.++.
T Consensus 79 ~~~g~~~~---~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 79 FKDGQPVE---VLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EETTEEEE---EEESCCCHHHHHHHHHTTC--
T ss_pred EeCCcEee---eEeCCCCHHHHHHHHHHHhhh
Confidence 98887654 788999999999999998754
No 55
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.71 E-value=2.3e-17 Score=130.47 Aligned_cols=106 Identities=23% Similarity=0.499 Sum_probs=94.7
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
.+.+..++.++|.+.+ ..+++++|+||++||++|+.+.+.|.+++..+.+ .+.|+.+|++.+.. .+|+|.++|++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 3567889999999988 6789999999999999999999999999999986 59999999998875 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
++|++|+.+. ++.|..+.+.|.+||++.++.
T Consensus 123 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 123 ILFHKGRELA---RAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCCeEEE---EecCCCCHHHHHHHHHHHhcc
Confidence 9999888764 789999999999999998754
No 56
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.71 E-value=2.7e-17 Score=124.10 Aligned_cols=106 Identities=25% Similarity=0.443 Sum_probs=94.3
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
...|..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+.. .++++.++|++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 88 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETARNFQVVSIPTL 88 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhcCCCcCCEE
Confidence 467889999999998877889999999999999999999999999999876 69999999998765 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++|++|..+. .+.|..+.+.|.+||++.++
T Consensus 89 ~~~~~g~~~~---~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 89 ILFKDGQPVK---RIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHTCSCCC
T ss_pred EEEECCEEEE---EecCCCCHHHHHHHHHHHHh
Confidence 9999887654 78999999999999988764
No 57
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.71 E-value=3.9e-17 Score=120.01 Aligned_cols=101 Identities=20% Similarity=0.393 Sum_probs=89.1
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEE
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 239 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~ 239 (313)
|..++.++|.+.+ ..+++++|+||++||++|+.+.+.+.+++..+.+ .+.++.+|++.+.. .++++.++|++++|
T Consensus 2 v~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQAI-QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHHH-SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 6789999999654 6779999999999999999999999999999876 59999999998765 78999999999999
Q ss_pred eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 240 PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 240 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|+.+. .+.|..+.+.|.+||.+.+
T Consensus 79 ~~G~~~~---~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVK---QLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEE---EEecCCCHHHHHHHHHHHh
Confidence 8887654 7889899999999998765
No 58
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.71 E-value=4e-17 Score=126.71 Aligned_cols=107 Identities=21% Similarity=0.370 Sum_probs=92.7
Q ss_pred CCCCeEEEcCcChHHHhhc-----------CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-
Q 021368 158 NDGDVKIVVGNNFDEIVLD-----------ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH- 225 (313)
Q Consensus 158 ~~~~v~~l~~~~f~~~l~~-----------~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~- 225 (313)
....|..++.++|.+.+.+ .+++++|+||++||++|+.+.+.|.+++..+.+ .+.++.+|++.+..
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPEL 97 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHHH
Confidence 3567899999999998876 478999999999999999999999999999986 69999999998865
Q ss_pred -ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 226 -HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 226 -~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
..|++.++|++++|..+..+ +.+.|..+.+.|.+||.+.+.
T Consensus 98 ~~~~~v~~~Pt~~~~~~~g~~---~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPMKGEP---QVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHTTCCSSSEEEEECSSSCC---EEEESCCCHHHHHHHHHHTTC
T ss_pred HHHcCCCCcCEEEEEeCCCCE---EEEeCCCCHHHHHHHHHHHHc
Confidence 79999999999999655443 288999999999999999875
No 59
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.71 E-value=3.7e-18 Score=130.58 Aligned_cols=102 Identities=15% Similarity=0.110 Sum_probs=93.4
Q ss_pred CeEEEcCcChHHHhhcCCCcEEEEEeCCC--CccchhhhHHHHHHHHHhcCCCc-EEEEEEeCCCccc--ccCCCCcCce
Q 021368 161 DVKIVVGNNFDEIVLDESKDVLLEIYAPW--CGHCQAFEPTYNKLAKHLRGVDS-IVIAKMDGTTNEH--HRAKSDGFPT 235 (313)
Q Consensus 161 ~v~~l~~~~f~~~l~~~~k~~lv~fy~~~--C~~C~~~~~~~~~la~~~~~~~~-v~~~~vd~~~~~~--~~~~v~~~P~ 235 (313)
.+..++.++|++.+. .+++++|+||++| |++|+.+.|++.+++..|.+ . +.|+++|++.+.. .+|+|.++||
T Consensus 18 g~~~~t~~~F~~~v~-~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHHH-TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHHh-CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 356899999999984 7789999999999 99999999999999999976 6 9999999998876 7999999999
Q ss_pred EEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 236 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 236 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+++|++|+.+. +..|..+...|.+||++++
T Consensus 95 lilFk~G~~v~---~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 95 TLVFTGGNYRG---VLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEEEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCEEEE---EEecCCCHHHHHHHHHHHh
Confidence 99999999986 8899899999999999886
No 60
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.71 E-value=3.8e-17 Score=128.07 Aligned_cols=105 Identities=21% Similarity=0.520 Sum_probs=95.5
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
.+.+..++.++|.+.+ ..+++++|+||++||++|+.+.+.|.+++..+.. ++.++.+|++.+.. .+|++.++|++
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 4678999999999988 7789999999999999999999999999999876 69999999998876 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++|++|+.+. +|.|..+.+.|.+||++.+.
T Consensus 114 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 114 MLYRNGKMID---MLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EEEETTEEEE---EESSCCCHHHHHHHHHHHHH
T ss_pred EEEECCeEEE---EEeCCCCHHHHHHHHHHHhc
Confidence 9999888764 79999999999999999864
No 61
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.71 E-value=2.3e-17 Score=124.76 Aligned_cols=105 Identities=21% Similarity=0.481 Sum_probs=92.2
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.|..++.++|.+.+...+++++|+||++||++|+.+.+.|.+++..+.+ ++.++.+|++.+.. .++++.++|+++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 45888999999887777889999999999999999999999999999986 69999999998875 789999999999
Q ss_pred EEeCCCCCcCceeeccC----cCHHHHHHHHHhcCC
Q 021368 238 FFPAGNKSFDPINVDVD----RTVVALYKFLKKNAS 269 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~----~~~~~l~~fi~~~~~ 269 (313)
+|.+|..+. .+.|. .+.+.|.+||.+.+.
T Consensus 81 ~~~~~~~~~---~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 81 LYQYERAKK---SIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEEGGGT---EEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EEeCCCccc---eeeccccCcCCHHHHHHHHHHHHH
Confidence 997776653 66664 799999999998864
No 62
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.70 E-value=8.3e-17 Score=140.75 Aligned_cols=115 Identities=26% Similarity=0.492 Sum_probs=98.8
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc--cc--ccCCCCcCc
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN--EH--HRAKSDGFP 234 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~--~~--~~~~v~~~P 234 (313)
...|..|+.++|++.+.+.+++++|+|||+||++|+.+.|.|.+++..+.+ .+.++.+||+.. .. .+|+|.++|
T Consensus 16 ~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d~~~~~~l~~~~~I~~~P 93 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCDLNKNKALCAKYDVNGFP 93 (298)
T ss_dssp CTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTSTTTHHHHHHTTCCBSS
T ss_pred CCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEEEEccCccCHHHHHhCCCCccc
Confidence 577999999999999977789999999999999999999999999999976 588999999843 22 789999999
Q ss_pred eEEEEeCCCCC--------------cCceeeccCcCHHHHHHHHHhcCCCCcccc
Q 021368 235 TILFFPAGNKS--------------FDPINVDVDRTVVALYKFLKKNASIPFKIQ 275 (313)
Q Consensus 235 ~i~~~~~g~~~--------------~~~~~y~g~~~~~~l~~fi~~~~~~~~~~~ 275 (313)
++++|++|..+ ..+..|.|.++.+.|.+|+.+.++......
T Consensus 94 t~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i 148 (298)
T 3ed3_A 94 TLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKF 148 (298)
T ss_dssp EEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEEC
T ss_pred eEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEc
Confidence 99999998620 025689999999999999999987665543
No 63
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.70 E-value=2.3e-17 Score=123.85 Aligned_cols=102 Identities=19% Similarity=0.344 Sum_probs=88.7
Q ss_pred CCeEEEcCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 160 GDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
......+.++|++.+.+ .+++++|+||++||++|+.+.+.|.+++..+.+ +.|+.+|++.+.. ..|++.++|++
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT---SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCccccEE
Confidence 44556788999998853 689999999999999999999999999988754 8999999998865 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|++|+.+. .+.|. +.+.|.+||++++
T Consensus 89 ~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFFKKGQKVG---EFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EEESSSSEEE---EEESC-CHHHHHHHHHHHC
T ss_pred EEEeCCeEEE---EEcCC-CHHHHHHHHHHhC
Confidence 9998888764 78888 9999999998764
No 64
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.70 E-value=9.5e-17 Score=119.30 Aligned_cols=103 Identities=24% Similarity=0.386 Sum_probs=88.3
Q ss_pred CCCeEEEcCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC-Cccc--ccCCCCcCc
Q 021368 159 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT-TNEH--HRAKSDGFP 234 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~-~~~~--~~~~v~~~P 234 (313)
.+.|..++.++|.+.+.+ .+++++|+||++||++|+.+.+.+.+++..+.+ +.++.+|++ .+.. .+|++.++|
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~---v~~~~vd~~~~~~~~~~~~~v~~~P 80 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD---VIFLKLDCNQENKTLAKELGIRVVP 80 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEECSSTTHHHHHHHCCSBSS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC---eEEEEEecCcchHHHHHHcCCCeee
Confidence 467899999999998864 578999999999999999999999999998863 899999998 3433 789999999
Q ss_pred eEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 235 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++++|++|..+. .+.|. +.+.|.++|++.+
T Consensus 81 t~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 81 TFKILKENSVVG---EVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp EEEEESSSSEEE---EEESS-CHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEE---EEcCC-CHHHHHHHHHHhh
Confidence 999998888754 67786 4889999998763
No 65
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.69 E-value=1e-16 Score=134.88 Aligned_cols=142 Identities=23% Similarity=0.409 Sum_probs=120.9
Q ss_pred CCcccCCcccccCCC----CCCHHHHHHHHHhcCCCceEEeCCCcccccccCCCccEEEEE-eeC-CchhhhhHHHHHHH
Q 021368 1 MVKKETEKISYFADG----KFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLF-AVS-NDSEKLLPVFEEAA 74 (313)
Q Consensus 1 ~~~~~~~~~~~y~~g----~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~~~~~~~~v~f~-~~~-~~c~~~~~~~~~~a 74 (313)
|||..++....| +| +++..+|.+||..+..|+|.++|.+++..++..+.+..+++| .+| .+|+.+.+.|+++|
T Consensus 79 lfk~~~~~~~~~-~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA 157 (227)
T 4f9z_D 79 LFRLVDNEQLNL-EDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAA 157 (227)
T ss_dssp EEETTTTEEEEE-CHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHH
T ss_pred EEEecCcccccc-cccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHH
Confidence 467777788899 84 799999999999999999999999999999887767666655 557 88999999999999
Q ss_pred HhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccC-CCCCHHHHHHHHHHHhcCC
Q 021368 75 KSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGK 144 (313)
Q Consensus 75 ~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~ 144 (313)
++|++++.|+++|+++.. +..+++.||+.....|++++++.....+|.+. +..+.++|.+|+.+++.|+
T Consensus 158 k~~k~~i~F~~vd~~~~~-~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 158 KLFQGKILFILVDSGMKE-NGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp HHTTTTCEEEEEETTSGG-GHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred HHhhCCEEEEEeCCccHh-HHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 999999999999998644 66789999998444599999987655556664 7899999999999999874
No 66
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.69 E-value=7.5e-17 Score=117.90 Aligned_cols=101 Identities=20% Similarity=0.366 Sum_probs=89.6
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEE
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 239 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~ 239 (313)
|..++.++|++.+ ..+++++|+||++||++|+.+.+.+.+++..+.+ +.++.+|++.+.. ..+++.++|++++|
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 4678999999988 5688999999999999999999999999998865 8999999998765 78999999999999
Q ss_pred eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 240 PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 240 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++|..+. .+.|..+.+.|.+||.+.++
T Consensus 77 ~~g~~~~---~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVD---EIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhh---hccCCCCHHHHHHHHHHHhc
Confidence 8887654 78899999999999998754
No 67
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.69 E-value=4.2e-17 Score=120.08 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=77.4
Q ss_pred cCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCC
Q 021368 166 VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGN 243 (313)
Q Consensus 166 ~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~ 243 (313)
+.++|++.+ +.+++++|+||++||++|+.+.|.+.+++..+. ++.++.+|++.+.. .+|++.++|++++|++|+
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 457777776 578999999999999999999999999999873 59999999998875 789999999999999888
Q ss_pred CCcCceeeccCcCHHHHHHHHHhcC
Q 021368 244 KSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 244 ~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
.+. ++.|..+.+.|.++|++++
T Consensus 83 ~~~---~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EIL---RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEE---EEESSCCHHHHHHHHHTTC
T ss_pred EEE---EEeCCcCHHHHHHHHHHhh
Confidence 764 7889999999999998875
No 68
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.69 E-value=1.2e-16 Score=117.89 Aligned_cols=101 Identities=18% Similarity=0.271 Sum_probs=85.3
Q ss_pred eEEE-cCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 162 VKIV-VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 162 v~~l-~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
|..+ +.++|++.+.+ .+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+.. .++++.++|+++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQGTAATNNISATPTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHhcCCCcccEEE
Confidence 4555 56889998864 68999999999999999999999999999983 59999999998765 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+|++|..+. ++.|. +.+.|.+||+++++
T Consensus 80 ~~~~G~~~~---~~~G~-~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 80 FFRNKVRID---QYQGA-DAVGLEEKIKQHLE 107 (107)
T ss_dssp EEETTEEEE---EEESS-CHHHHHHHHHHHHC
T ss_pred EEECCeEEE---EEeCC-CHHHHHHHHHHhcC
Confidence 999988764 78884 45669999988753
No 69
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.68 E-value=5e-16 Score=132.47 Aligned_cols=152 Identities=24% Similarity=0.380 Sum_probs=113.9
Q ss_pred cCCcccccCC--CCCCHHHHHHHHHhcCCCceEEeCCCcccccccCCCccEEEEEeeC-C-----chhhhhHHHHHHHHh
Q 021368 5 ETEKISYFAD--GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS-N-----DSEKLLPVFEEAAKS 76 (313)
Q Consensus 5 ~~~~~~~y~~--g~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~-----~c~~~~~~~~~~a~~ 76 (313)
.|+..+.| + |+++..+|.+||..+..|+|.++|.+++..++. +.+.+++|+... . .++.+...++++|++
T Consensus 88 fde~~~~y-~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~ 165 (250)
T 3ec3_A 88 YEPRMHVM-DVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKD 165 (250)
T ss_dssp TSCSCEEE-ECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTT
T ss_pred ccccceec-cCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHHHHHHHHHh
Confidence 47888999 8 579999999999999999999999999988774 556666666533 2 245689999999999
Q ss_pred ccCeEEEEEEeCCCcccccchhhhhCCCCCC-CcEEEEEcCCCCceeccC-CCCCHHHHHHHHHHHhcCCCCCCCCCCCC
Q 021368 77 FKGKLIFVYVQMDNEDVGKPVSEYFGITGEA-PKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPI 154 (313)
Q Consensus 77 ~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~-~P~i~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~s~~~ 154 (313)
|+ ++.|+++|+.+ +...++.||+.... +|.+++++. ...+|.+. +..+.++|.+|+.+++.|+++++++|+++
T Consensus 166 ~k-ki~F~~~d~~~---~~~~l~~fgl~~~~~~p~~~~~~~-~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl~p~~kSepi 240 (250)
T 3ec3_A 166 FP-EYTFAIADEED---YATEVKDLGLSESGGDVNAAILDE-SGKKFAMEPEEFDSDALREFVMAFKKGKLKPVIKSQPV 240 (250)
T ss_dssp CT-TSEEEEEETTT---THHHHHHTTCSSCSCSCEEEEECT-TSCEEECCCCSCCHHHHHHHHHHHHTTCCCCCC-----
T ss_pred hc-ceeEEEEcHHH---HHHHHHHcCCCccCCCcEEEEEcC-CCceecCCcccCCHHHHHHHHHHHHCCCccceeecCCC
Confidence 99 89999999987 55788999998643 456666653 34577776 67999999999999999999999999999
Q ss_pred CCCCCCCeE
Q 021368 155 PETNDGDVK 163 (313)
Q Consensus 155 ~~~~~~~v~ 163 (313)
|+.++++|.
T Consensus 241 Pe~~~~pV~ 249 (250)
T 3ec3_A 241 PKNNKGAAA 249 (250)
T ss_dssp ---------
T ss_pred CCCCCCCCC
Confidence 998766663
No 70
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.68 E-value=2.2e-16 Score=116.02 Aligned_cols=101 Identities=25% Similarity=0.440 Sum_probs=87.7
Q ss_pred eEEEcC-cChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 162 VKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 162 v~~l~~-~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
|..++. ++|.+.+.+ .+++++|+||++||++|+.+.+.+.+++..++. ++.++.+|++.+.. .++++.++|+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMPTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchHHHHHHcCCCcccEEE
Confidence 456777 889888864 688999999999999999999999999999864 69999999998765 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+|++|..+. .+.| .+.+.|.+||++++
T Consensus 80 ~~~~G~~~~---~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 80 FLKNGVKVE---EFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEETTEEEE---EEES-CCHHHHHHHHHHTC
T ss_pred EEcCCcEEE---EEcC-CCHHHHHHHHHHhC
Confidence 999887654 7888 78899999998764
No 71
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.68 E-value=2.1e-16 Score=137.51 Aligned_cols=104 Identities=17% Similarity=0.325 Sum_probs=94.2
Q ss_pred CCeEEEcCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 160 GDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
+.|..++.++|++.+.. .+++++|+||++||++|+.+.|.|.+++..+.+ .+.|+.+|++.+.. ..|+|.++||+
T Consensus 7 ~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 7 ENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp TTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 57899999999997753 379999999999999999999999999999986 69999999998865 79999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|++|..+. .|.|..+.+.+..|+...+
T Consensus 85 ~~~~~G~~~~---~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQNGQPVD---GFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHHHHHS
T ss_pred EEEECCEEEE---EeeCCCCHHHHHHHHHHHc
Confidence 9999887764 7999999999999999986
No 72
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.67 E-value=4.6e-16 Score=121.44 Aligned_cols=133 Identities=36% Similarity=0.631 Sum_probs=106.7
Q ss_pred HHHHhcCCCceEEeCCCcccccccCCCccEEEEEeeC--CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhh
Q 021368 24 DFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYF 101 (313)
Q Consensus 24 ~fi~~~~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~--~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~ 101 (313)
+-|..++.|+|.++|.++...++..+.+..+++|... ...+.+.+.++++|.+|+|++.|+.+|.+... +..+++.|
T Consensus 6 ~~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~-~~~~l~~f 84 (147)
T 3bj5_A 6 HHMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTD-NQRILEFF 84 (147)
T ss_dssp ---------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGG-GHHHHHHT
T ss_pred cchhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHh-HHHHHHHc
Confidence 3567889999999999999999988877777766653 55788999999999999999999999985433 56788999
Q ss_pred CCCCCCCcEEEEEcC-CCCceeccC-CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 021368 102 GITGEAPKVLAYTGN-DDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPET 157 (313)
Q Consensus 102 ~v~~~~~P~i~~~~~-~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~ 157 (313)
|+.....|+++++.. +...+|.+. +..+.+.|.+|+.+++.|+++++++|+++|+.
T Consensus 85 Gl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~ 142 (147)
T 3bj5_A 85 GLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 142 (147)
T ss_dssp TCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGG
T ss_pred CCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCC
Confidence 999755699999875 445577765 78999999999999999999999999999987
No 73
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.67 E-value=1.6e-16 Score=131.92 Aligned_cols=109 Identities=20% Similarity=0.464 Sum_probs=96.7
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
...|..+++++|...+ ..+++++|+||++||++|+.+.|.|.+++..+.+ .+.|+.+|++.+.. ..+++.++|++
T Consensus 96 ~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 172 (210)
T 3apq_A 96 DPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCRMKGVNSYPSL 172 (210)
T ss_dssp CTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHHHcCCCcCCeE
Confidence 4568899999999988 5689999999999999999999999999999976 69999999998875 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCCcc
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 273 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~ 273 (313)
++|++|..+. .+.|..+.+.|.+||.++++..+.
T Consensus 173 ~~~~~G~~~~---~~~G~~~~~~l~~~i~~~l~~~~~ 206 (210)
T 3apq_A 173 FIFRSGMAAV---KYNGDRSKESLVAFAMQHVRSTVT 206 (210)
T ss_dssp EEECTTSCCE---ECCSCCCHHHHHHHHHHHHHCCSS
T ss_pred EEEECCCcee---EecCCCCHHHHHHHHHHhCcccce
Confidence 9998888654 899999999999999998765443
No 74
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.66 E-value=3.1e-16 Score=119.29 Aligned_cols=100 Identities=23% Similarity=0.326 Sum_probs=88.9
Q ss_pred CeEEEcC-cChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 161 DVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 161 ~v~~l~~-~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
-|..++. ++|++.+ ..+++++|+||++||++|+.+.+.|.+++..+. ++.|+.+|++.+.. ..|++.++|+++
T Consensus 20 mv~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 95 (125)
T 1r26_A 20 SVVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVSKCRVLQLPTFI 95 (125)
T ss_dssp CCEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 4788999 9999988 678999999999999999999999999999984 59999999998775 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+|++|..+. .+.| .+.+.|.+||.+.+
T Consensus 96 i~~~G~~~~---~~~G-~~~~~l~~~l~~~l 122 (125)
T 1r26_A 96 IARSGKMLG---HVIG-ANPGMLRQKLRDII 122 (125)
T ss_dssp EEETTEEEE---EEES-SCHHHHHHHHHHHH
T ss_pred EEeCCeEEE---EEeC-CCHHHHHHHHHHHh
Confidence 999888764 7888 68899999998875
No 75
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.66 E-value=1.9e-16 Score=122.82 Aligned_cols=104 Identities=21% Similarity=0.349 Sum_probs=78.9
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.|..++.++|.+.+...++ ++|+||++||++|+.+.+.|.+++..+.+ ++.|+.+|++.+.. ..|++.++|+++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 55778999999998876666 99999999999999999999999999976 69999999998765 689999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+|++|..+. .+.|..+.+.|.+||.+.++
T Consensus 110 ~~~~G~~~~---~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 110 LFRRGAPVA---TWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHHT
T ss_pred EEeCCcEEE---EEeCCCCHHHHHHHHHHHHc
Confidence 999887654 78899999999999998764
No 76
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.66 E-value=2.5e-15 Score=136.08 Aligned_cols=229 Identities=15% Similarity=0.117 Sum_probs=159.3
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCceEEeCC-CcccccccCCCccEEEEEeeCCchhhhhHHHHHHHHhccCeEEEEEEeCC
Q 021368 11 YFADGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMD 89 (313)
Q Consensus 11 ~y~~g~~~~~~l~~fi~~~~~~~v~~lt~-~~~~~~~~~~~~~~v~f~~~~~~c~~~~~~~~~~a~~~~~~v~f~~vd~~ 89 (313)
.| .|..+...|..||.....+.+..++. ++++. +.....++|.||.++ +....+.|.++|..+.+.+.|+...+
T Consensus 98 ~~-~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~--~~~~~~~f~~~A~~~~~~~~F~~~~~- 172 (382)
T 2r2j_A 98 EY-RGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQK--DSDNYRVFERVANILHDDCAFLSAFG- 172 (382)
T ss_dssp EC-CSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCS--SSHHHHHHHHHHHHHTTTCEEEEEES-
T ss_pred ee-cCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCC--CChhHHHHHHHHHHhhccceEEEEeh-
Confidence 69 99999999999999988888888864 46776 455556778888775 33457789999999998888888876
Q ss_pred CcccccchhhhhCCCCCCCcEEEEEcCCC-CceeccCCCC-CHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcC
Q 021368 90 NEDVGKPVSEYFGITGEAPKVLAYTGNDD-AKKHILDGEL-TLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVG 167 (313)
Q Consensus 90 ~~~~~~~l~~~~~v~~~~~P~i~~~~~~~-~~~~~~~g~~-~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~ 167 (313)
.+++.+++.++ | +++...+. .....|.|.+ +.++|.+||.+... +.|..++.
T Consensus 173 ------~~~~~~~v~~~--p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-----------------p~v~elt~ 226 (382)
T 2r2j_A 173 ------DVSKPERYSGD--N-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV-----------------PLVREITF 226 (382)
T ss_dssp ------CC--------C--E-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS-----------------CSSEECCH
T ss_pred ------hhHHhhCCCCC--c-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhccc-----------------CceEecCh
Confidence 24677899877 8 66665532 3457789988 99999999998753 45788999
Q ss_pred cChHHHhhcCCCcEEEEEeCCCCc-cchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCC--cCceEEEEeCC
Q 021368 168 NNFDEIVLDESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSD--GFPTILFFPAG 242 (313)
Q Consensus 168 ~~f~~~l~~~~k~~lv~fy~~~C~-~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~--~~P~i~~~~~g 242 (313)
+++.+++ ..+.+++|.|+.++|. .|..+...+.+++..+++ .+.|+.+|++.+.. ..+++. .+|++.++..+
T Consensus 227 ~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~--~i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~ 303 (382)
T 2r2j_A 227 ENGEELT-EEGLPFLILFHMKEDTESLEIFQNEVARQLISEKG--TINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFR 303 (382)
T ss_dssp HHHHHHH-TTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT--TSEEEEEETTTTHHHHHHTTCCGGGCSEEEEECSS
T ss_pred hhHHHHh-cCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC--eeEEEEEchHHhHHHHHHcCCCccCCCEEEEEcch
Confidence 9998865 5678899999999874 355565666666666665 79999999997764 577776 78999887654
Q ss_pred CCCcCceeeccCcCHHHHHHHHHhcCCCCccc
Q 021368 243 NKSFDPINVDVDRTVVALYKFLKKNASIPFKI 274 (313)
Q Consensus 243 ~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~ 274 (313)
... ..-.+.+..+.+.|.+|+++.+.-+++.
T Consensus 304 ~~y-~~~~~~~~~~~~~i~~F~~d~~~Gkl~p 334 (382)
T 2r2j_A 304 HMY-VFGDFKDVLIPGKLKQFVFDLHSGKLHR 334 (382)
T ss_dssp CEE-ECCCSGGGGSTTHHHHHHHHHHHTTTSS
T ss_pred hcC-CCCccccccCHHHHHHHHHHHHCCCccc
Confidence 321 1112344556788999999998766644
No 77
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.66 E-value=2.5e-16 Score=119.06 Aligned_cols=104 Identities=21% Similarity=0.349 Sum_probs=91.0
Q ss_pred CCCeEEEcCcChHHHhhc---CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcC
Q 021368 159 DGDVKIVVGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGF 233 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~---~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~ 233 (313)
...+..++.++|.+.+.. .+++++|+||++||++|+.+.+.|.+++..+.+ +.++.+|++.+.. .+|++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~ 88 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN---AVFLKVDVDELKPIAEQFSVEAM 88 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---cEEEEEECCCCHHHHHHcCCCcc
Confidence 345677888999998866 689999999999999999999999999998864 8999999998765 78999999
Q ss_pred ceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 234 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 234 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
|++++|++|+.+. ++.|.. .+.|.+||.+++.
T Consensus 89 Pt~~~~~~G~~~~---~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 89 PTFLFMKEGDVKD---RVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SEEEEEETTEEEE---EEESSC-HHHHHHHHHHHHS
T ss_pred cEEEEEeCCEEEE---EEeCcC-HHHHHHHHHHHhc
Confidence 9999999888754 788977 9999999998764
No 78
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.66 E-value=5.7e-16 Score=132.34 Aligned_cols=153 Identities=24% Similarity=0.369 Sum_probs=114.5
Q ss_pred cCCcccccCCCCCCHHHHHHHHHhcCCCceEEeCCCcccccccCCCccEEEEEeeC-C-c---hhhhhHHHHHHHHhccC
Q 021368 5 ETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS-N-D---SEKLLPVFEEAAKSFKG 79 (313)
Q Consensus 5 ~~~~~~~y~~g~~~~~~l~~fi~~~~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~-~---c~~~~~~~~~~a~~~~~ 79 (313)
.++....|..|+++..+|.+||..+..|+|.++|.+++..+... +.++.|+... . . .+.+...+.++|.+|.+
T Consensus 87 f~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~ 164 (252)
T 2h8l_A 87 FEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLD 164 (252)
T ss_dssp TSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSS--SEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcCC--CeEEEEeecchhhcchhHHHHHHHHHHHHHHccc
Confidence 46777777457899999999999999999999999999987543 5566666543 2 1 23688899999999998
Q ss_pred e---EEEEEEeCCCcccccchhhhhCC--CCCCCcEEEEEcCCCCceeccCCCCCHHH--HHHHHHHHhcCCCCCCCCCC
Q 021368 80 K---LIFVYVQMDNEDVGKPVSEYFGI--TGEAPKVLAYTGNDDAKKHILDGELTLDK--IKTFGEDFLEGKLKPFFKSD 152 (313)
Q Consensus 80 ~---v~f~~vd~~~~~~~~~l~~~~~v--~~~~~P~i~~~~~~~~~~~~~~g~~~~~~--i~~fi~~~~~~~~~~~~~s~ 152 (313)
+ +.|+++|++. ...+++.||+ .....|.+++++.. ..+|.+.+..+.+. |.+|+.+++.|+++++++|+
T Consensus 165 k~~~~~F~~~d~~~---~~~~~~~fgl~~~~~~~P~v~i~~~~-~~ky~~~~~~t~~~~~i~~F~~~~~~Gkl~~~~kSe 240 (252)
T 2h8l_A 165 AGHKLNFAVASRKT---FSHELSDFGLESTAGEIPVVAIRTAK-GEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSE 240 (252)
T ss_dssp TTCCCEEEEEETTT---THHHHGGGTCCCCSCSSCEEEEECTT-SCEEECCSCCCTTSHHHHHHHHHHHHTCSCCCC---
T ss_pred cCceEEEEEEchHH---HHHHHHHcCCCCccCCCCEEEEEeCc-CcEecCCcccCcchHHHHHHHHHHHCCCccccccCC
Confidence 7 9999999987 5578999999 44556999998653 45777888889899 99999999999999999999
Q ss_pred CCCCCCCCCeE
Q 021368 153 PIPETNDGDVK 163 (313)
Q Consensus 153 ~~~~~~~~~v~ 163 (313)
++|+.++++|+
T Consensus 241 ~iPe~~~~pV~ 251 (252)
T 2h8l_A 241 PIPESNDGAAA 251 (252)
T ss_dssp -----------
T ss_pred CCCCCCCCCCC
Confidence 99998766664
No 79
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.66 E-value=2.9e-16 Score=116.38 Aligned_cols=99 Identities=23% Similarity=0.474 Sum_probs=85.5
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEE
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 239 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~ 239 (313)
....+.++|++.+ ..+++++|+||++||++|+.+.+.+.+++..+.+ +.++.+|++.+.. ..+++.++|++++|
T Consensus 9 ~~~~~~~~f~~~~-~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~---~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 84 (109)
T 3f3q_A 9 TQFKTASEFDSAI-AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ---ADFYKLDVDELGDVAQKNEVSAMPTLLLF 84 (109)
T ss_dssp EECCSHHHHHHHT-TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCCCHHHHHHHH-hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4456778888877 4689999999999999999999999999999854 8999999998765 78999999999999
Q ss_pred eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 240 PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 240 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|+.+. ++.|. +.+.|.++|++++
T Consensus 85 ~~G~~~~---~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 85 KNGKEVA---KVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp ETTEEEE---EEESS-CHHHHHHHHHHHC
T ss_pred ECCEEEE---EEeCC-CHHHHHHHHHhhC
Confidence 9887764 78886 7799999998764
No 80
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.66 E-value=1.9e-16 Score=117.65 Aligned_cols=103 Identities=20% Similarity=0.430 Sum_probs=88.8
Q ss_pred CeEEE-cCcChHHHhhc-C--CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCc
Q 021368 161 DVKIV-VGNNFDEIVLD-E--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFP 234 (313)
Q Consensus 161 ~v~~l-~~~~f~~~l~~-~--~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P 234 (313)
.|..+ +.++|++.+.. . +++++|+||++||++|+.+.+.|.+++..+.+ ++.++.+|++.+.. ..+++.++|
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~P 80 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAEAAGITAMP 80 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHHHHTCCBSS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHHHcCCCccc
Confidence 46777 45889988854 3 78999999999999999999999999999876 69999999998765 789999999
Q ss_pred eEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 235 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++++|++|..+. .+.|. +.+.|.+||++++.
T Consensus 81 t~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 81 TFHVYKDGVKAD---DLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEEEETTEEEE---EEESC-CHHHHHHHHHHHHC
T ss_pred EEEEEECCeEEE---EEcCC-CHHHHHHHHHHHhc
Confidence 999999888754 78887 89999999998753
No 81
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.65 E-value=2.9e-16 Score=123.19 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=87.5
Q ss_pred EcCcChHHHhh-cCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeC
Q 021368 165 VVGNNFDEIVL-DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPA 241 (313)
Q Consensus 165 l~~~~f~~~l~-~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~ 241 (313)
.+.++|++.+. ..+++++|+||++||++|+.+.|.+.+++..+.+ .+.++.+|++.+.. ..|+|.++|++++|++
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 86 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFN 86 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHHcCCCccCeEEEEEC
Confidence 46678998886 5689999999999999999999999999998866 59999999988876 7899999999999999
Q ss_pred CCCC---------cCceeecc-CcCHHHHHHHHHhcC
Q 021368 242 GNKS---------FDPINVDV-DRTVVALYKFLKKNA 268 (313)
Q Consensus 242 g~~~---------~~~~~y~g-~~~~~~l~~fi~~~~ 268 (313)
|+.+ . ++.| ..+.+.|.++|+...
T Consensus 87 G~~v~~~~g~~~~~---~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 87 GQHMKVDYGSPDHT---KFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TEEEEEECSSSCCS---CEESCCSSHHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCC---eEeeecCCHHHHHHHHHHHH
Confidence 9876 4 7888 889999999998874
No 82
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.4e-16 Score=116.42 Aligned_cols=102 Identities=12% Similarity=0.237 Sum_probs=84.0
Q ss_pred eEEEcC-cChHHHhh--cCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 162 VKIVVG-NNFDEIVL--DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 162 v~~l~~-~~f~~~l~--~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
|..++. ++|++.+. ..+++++|+||++||++|+.+.+.+.+++..++.. ++.++.+|++.+.. .++++.++|++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS-NVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT-TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC-CEEEEEEecccCHHHHHHcCCCcccEE
Confidence 667887 89999885 34789999999999999999999999999986432 59999999998775 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|++|+.+. ++.|. ....|.++|.+.+
T Consensus 81 ~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 81 IIIHKGTILK---ELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEETTEEEE---EECSC-CHHHHHHHHHHHH
T ss_pred EEEECCEEEE---EecCC-CHHHHHHHHHHHH
Confidence 9999888764 77886 4556999998764
No 83
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.65 E-value=7e-16 Score=116.94 Aligned_cols=103 Identities=25% Similarity=0.432 Sum_probs=88.2
Q ss_pred CCCeEEEcCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-ccc--ccCCCCcCc
Q 021368 159 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-NEH--HRAKSDGFP 234 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-~~~--~~~~v~~~P 234 (313)
.+.|..++.++|.+.+.. .+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++. +.. .++++.++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCcchHHHHHHcCCCeee
Confidence 366899999999998864 67899999999999999999999999999886 38999999983 433 689999999
Q ss_pred eEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 235 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++++|++|+.+. ++.|.. .+.|.++|++.+
T Consensus 94 t~~~~~~G~~~~---~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSVVG---EVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEEEE---EEESSC-HHHHHHHHHHHT
T ss_pred EEEEEeCCcEEE---EEcCCC-HHHHHHHHHHhh
Confidence 999999988764 677864 889999998764
No 84
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.65 E-value=3.8e-16 Score=117.20 Aligned_cols=100 Identities=19% Similarity=0.449 Sum_probs=86.8
Q ss_pred CeEEEcC-cChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 161 DVKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 161 ~v~~l~~-~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
.|..++. ++|.+.+.+ .+++++|+||++||++|+.+.+.+.+++..+ ++.++.+|++.+.. .++++.++|++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 89 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTF 89 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHHHcCCCccceE
Confidence 3778887 899998864 6789999999999999999999999998876 58999999998765 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|++|+.+. .+.| .+.+.|.++|++++
T Consensus 90 ~~~~~G~~~~---~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVG---DVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEE---EEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEE---EEeC-CCHHHHHHHHHHhC
Confidence 9999888764 7788 68889999998764
No 85
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.65 E-value=3.7e-16 Score=116.37 Aligned_cols=102 Identities=22% Similarity=0.425 Sum_probs=89.4
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
++....++.++|++.+ +.+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+.. .++++.++|++
T Consensus 8 ~~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 8 HMVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp -CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred eeEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 3557788999999988 478999999999999999999999999999875 48999999998765 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|++|..+. .+.|. +.+.|.+||++.+
T Consensus 84 ~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 84 KVYKNGSSVD---TLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEETTEEEE---EEESC-CHHHHHHHHHTTC
T ss_pred EEEECCcEEE---EEeCC-CHHHHHHHHHHhh
Confidence 9999887754 78888 9999999998865
No 86
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.65 E-value=6.4e-16 Score=113.08 Aligned_cols=99 Identities=19% Similarity=0.497 Sum_probs=85.0
Q ss_pred EEEcC-cChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEE
Q 021368 163 KIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 238 (313)
Q Consensus 163 ~~l~~-~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~ 238 (313)
..++. ++|++.+.+ .+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+.. ..+++.++|++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAAAKYSVTAMPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHHHHcCCccccEEEE
Confidence 45666 788888754 67899999999999999999999999999875 58999999998765 7899999999999
Q ss_pred EeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 239 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 239 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
|++|..+. .+.| .+.+.|.+||++++
T Consensus 79 ~~~g~~~~---~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVD---RFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EETTEEEE---EEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEE---EEeC-CCHHHHHHHHHhhC
Confidence 99887654 7788 68899999998764
No 87
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.64 E-value=9.2e-16 Score=116.89 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=92.5
Q ss_pred CCCceEEeCCCccccccc-CCCccEEEEEeeC-CchhhhhHHHHHHHHhcc-----CeEEEEEEeCCCcccccchhhhhC
Q 021368 30 KLPLVTIFTRENAPSVFE-SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-----GKLIFVYVQMDNEDVGKPVSEYFG 102 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~~-~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~-----~~v~f~~vd~~~~~~~~~l~~~~~ 102 (313)
..+.|..|+.++|+..+. .+..++|.||++| ++|+.+.|.|.++|..+. +.+.|+.|||++ ++.+|++|+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~---~~~l~~~~~ 89 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK---YPDVIERMR 89 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT---CHHHHHHTT
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc---cHhHHHhcC
Confidence 355789999999999874 5778889999999 999999999999998764 469999999998 679999999
Q ss_pred CCCCCCcEEEEEcCCCC-ceeccCCCCCHHHHHHHHHHH
Q 021368 103 ITGEAPKVLAYTGNDDA-KKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~-~~~~~~g~~~~~~i~~fi~~~ 140 (313)
|.++ |++++|..+.. .+..|.|.++.+.|.+|+.+.
T Consensus 90 v~~~--Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSGF--PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSS--SEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CccC--CEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999 99999987764 346789999999999999874
No 88
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.64 E-value=2.7e-16 Score=120.06 Aligned_cols=89 Identities=24% Similarity=0.347 Sum_probs=79.8
Q ss_pred hhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceee
Q 021368 174 VLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINV 251 (313)
Q Consensus 174 l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y 251 (313)
....+++++|+||++||++|+.+.+.+.+++..+++ ++.++.+|++.+.. .++++.++|++++|++|+.+. ++
T Consensus 38 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~---~~ 112 (128)
T 3ul3_B 38 VNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLA---RK 112 (128)
T ss_dssp TTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEE---EE
T ss_pred HHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEE---Ee
Confidence 445789999999999999999999999999999985 79999999998866 789999999999998887654 88
Q ss_pred ccCcCHHHHHHHHHhc
Q 021368 252 DVDRTVVALYKFLKKN 267 (313)
Q Consensus 252 ~g~~~~~~l~~fi~~~ 267 (313)
.|..+.+.|.+||+++
T Consensus 113 ~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 113 DHFVSSNDLIALIKKH 128 (128)
T ss_dssp SSCCCHHHHHHHHTTC
T ss_pred cCCCCHHHHHHHHHhC
Confidence 9999999999999764
No 89
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.64 E-value=1e-15 Score=116.19 Aligned_cols=103 Identities=22% Similarity=0.390 Sum_probs=88.8
Q ss_pred CCCeEEE-cCcChHHHhhc---CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCc
Q 021368 159 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG 232 (313)
Q Consensus 159 ~~~v~~l-~~~~f~~~l~~---~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~ 232 (313)
...|..+ +.++|++.+.. .+++++|+||++||++|+.+.+.|.+++..+. ++.++.+|++.+.. ..|++.+
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~ 91 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQA 91 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHHHTTCCS
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHHcCCCc
Confidence 3557777 66889888864 58899999999999999999999999999885 59999999998765 7899999
Q ss_pred CceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 233 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 233 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+|++++|++|..+. ++.| .+.+.|.++|.+.+
T Consensus 92 ~Pt~~~~~~G~~~~---~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 92 MPTFMFLKEGKILD---KVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SSEEEEEETTEEEE---EEES-CCHHHHHHHHHHHC
T ss_pred cCEEEEEECCEEEE---EEeC-CCHHHHHHHHHHhc
Confidence 99999999888764 6778 58899999998875
No 90
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.64 E-value=8.6e-16 Score=112.66 Aligned_cols=96 Identities=20% Similarity=0.409 Sum_probs=83.5
Q ss_pred cCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCC
Q 021368 166 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAG 242 (313)
Q Consensus 166 ~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g 242 (313)
+.++|++.+.. .+++++|+||++||++|+.+.+.+.+++..+.+ +.++.+|++.+.. ..+++.++|++++|++|
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 83 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASESEVKSMPTFQFFKKG 83 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---SEEEEEETTTCHHHHHHTTCCBSSEEEEEETT
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC---eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECC
Confidence 45677777743 578999999999999999999999999998864 8999999998865 78999999999999988
Q ss_pred CCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 243 NKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 243 ~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+.+. .+.|. +.+.|.+||++++
T Consensus 84 ~~~~---~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 84 QKVG---EFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEE---EEESS-CHHHHHHHHHHHC
T ss_pred eEEE---EEeCC-CHHHHHHHHHHhC
Confidence 8764 78888 9999999998764
No 91
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.63 E-value=1.6e-15 Score=128.95 Aligned_cols=112 Identities=26% Similarity=0.444 Sum_probs=93.9
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcC-CCcEEEEEEeCCC--ccc--ccCCCCcC
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT--NEH--HRAKSDGF 233 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~-~~~v~~~~vd~~~--~~~--~~~~v~~~ 233 (313)
.+.|..++.++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+.+ ...+.++.+||+. +.. .+|+|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 467999999999999988889999999999999999999999999999975 2369999999954 333 78999999
Q ss_pred ceEEEEeCCCCCc--CceeeccCcCHHHHHHHHHhcCCCC
Q 021368 234 PTILFFPAGNKSF--DPINVDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 234 P~i~~~~~g~~~~--~~~~y~g~~~~~~l~~fi~~~~~~~ 271 (313)
|++++|.+|.... ..+.+.| .+.+.|.+||.+.+...
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~ 129 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESH 129 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTC
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhc
Confidence 9999999876642 2234555 69999999999987543
No 92
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=7.1e-17 Score=124.82 Aligned_cols=103 Identities=20% Similarity=0.373 Sum_probs=85.8
Q ss_pred CCCeEEEcCcChHHHhhcCC-CcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCC----
Q 021368 159 DGDVKIVVGNNFDEIVLDES-KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSD---- 231 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~-k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~---- 231 (313)
.+.|..++.++|++.+.... ++++|+||++||++|+.+.|.|.+++..+.+. ++.|+.+|++.+.. .+|++.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT-GLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS-SCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCccCHHHHHHccCcccCC
Confidence 35688999999999886554 48999999999999999999999999999742 69999999998765 789998
Q ss_pred --cCceEEEEeCCCCCcCceeeccCcCHHHHHHHHH
Q 021368 232 --GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLK 265 (313)
Q Consensus 232 --~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~ 265 (313)
++|++++|++|+.+. ++.|..+.+.|.+||.
T Consensus 85 ~~~~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAM---RRPQIDKKGRAVSWTF 117 (137)
T ss_dssp SSCSSEEEEESSSSEEE---EESCBCSSSCBCCCCC
T ss_pred cCCCCEEEEEECCEEEE---EecCcCchHHHHHHHh
Confidence 999999998888764 6778666555555553
No 93
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.63 E-value=1.8e-16 Score=133.80 Aligned_cols=134 Identities=18% Similarity=0.231 Sum_probs=100.7
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCCCCCeEEE-cCcChHHHhhc--CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCC
Q 021368 135 TFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLD--ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVD 211 (313)
Q Consensus 135 ~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l-~~~~f~~~l~~--~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~ 211 (313)
.|+.++..+++....++.. +....+.|..| +.++|.+.+.+ .+++++|+||++||++|+.+.|.|.+++..+.+
T Consensus 88 ~fL~~~r~~Rl~el~~~~~-~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-- 164 (245)
T 1a0r_P 88 NCLRKYRRQCMQDMHQKLS-FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-- 164 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHHHHHHHHHHhh-ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--
Confidence 4566655555555443322 23345778888 78999998864 378999999999999999999999999999863
Q ss_pred cEEEEEEeCCCccc-ccCCCCcCceEEEEeCCCCCcCceeec---c-CcCHHHHHHHHHhcCCCCc
Q 021368 212 SIVIAKMDGTTNEH-HRAKSDGFPTILFFPAGNKSFDPINVD---V-DRTVVALYKFLKKNASIPF 272 (313)
Q Consensus 212 ~v~~~~vd~~~~~~-~~~~v~~~P~i~~~~~g~~~~~~~~y~---g-~~~~~~l~~fi~~~~~~~~ 272 (313)
+.|+.+|++.... ..|+|.++||+++|++|..+...+.+. | ..+.+.|..||.++..++.
T Consensus 165 -v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~l~~ 229 (245)
T 1a0r_P 165 -VKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYGLLPE 229 (245)
T ss_dssp -SEEEEEEHHHHCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTCSCC
T ss_pred -CEEEEEeCCcHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcCCCCC
Confidence 8999999876333 689999999999999998765223332 1 1467889999999865433
No 94
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.63 E-value=1e-16 Score=133.53 Aligned_cols=128 Identities=19% Similarity=0.250 Sum_probs=101.0
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEE-cCcChHHHhhcCC--CcEEEEEeCCCCccchhhhHHHHHHHHHhcCC
Q 021368 134 KTFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLDES--KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV 210 (313)
Q Consensus 134 ~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l-~~~~f~~~l~~~~--k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~ 210 (313)
..|+.++..+++.....+.. +....+.|..+ +.++|.+.+.+.. ++++|+||++||++|+.+.+.|..++..+.
T Consensus 74 ~~fl~~~r~~Rl~el~~~~~-~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-- 150 (217)
T 2trc_P 74 EGCLRKYRRQCMQDMHQKLS-FGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-- 150 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--
Confidence 45777776666655443322 33345778888 8899999886554 899999999999999999999999999874
Q ss_pred CcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcC-------HHHHHHHHHhcCC
Q 021368 211 DSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRT-------VVALYKFLKKNAS 269 (313)
Q Consensus 211 ~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~-------~~~l~~fi~~~~~ 269 (313)
.+.|+.+|++ +.. ..|++.++||+++|++|..+. .+.|..+ .+.|.+||.++..
T Consensus 151 -~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v~---~~~G~~~~~g~~~~~~~Le~~L~~~g~ 213 (217)
T 2trc_P 151 -MVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELIS---NFISVAEQFAEDFFAADVESFLNEYGL 213 (217)
T ss_dssp -TSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEEE---EETTGGGGSCSSCCHHHHHHHHHTTTC
T ss_pred -CeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEEE---EEeCCcccCcccCCHHHHHHHHHHcCC
Confidence 5899999998 432 689999999999999988764 6777544 4899999998754
No 95
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.63 E-value=2.2e-15 Score=118.66 Aligned_cols=106 Identities=23% Similarity=0.379 Sum_probs=89.7
Q ss_pred CCeEEEc-CcChHHHhhcC-CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCce
Q 021368 160 GDVKIVV-GNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPT 235 (313)
Q Consensus 160 ~~v~~l~-~~~f~~~l~~~-~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~ 235 (313)
+.+..++ .++|.+.+.+. +++++|+||++||++|+.+.+.|.+++..+. ++.|+.+|++.+.. .+|++.++|+
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt 88 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVPEVSEKYEISSVPT 88 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCHHHHHHcCCCCCCE
Confidence 5577787 48888877543 7899999999999999999999999999873 59999999998875 7899999999
Q ss_pred EEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCCc
Q 021368 236 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 272 (313)
Q Consensus 236 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~ 272 (313)
+++|.+|+.+. .+.| .+.+.|.+||.+.++...
T Consensus 89 ~~~~~~G~~~~---~~~G-~~~~~l~~~i~~~l~~~~ 121 (153)
T 2wz9_A 89 FLFFKNSQKID---RLDG-AHAPELTKKVQRHASSGS 121 (153)
T ss_dssp EEEEETTEEEE---EEES-SCHHHHHHHHHHHSCTTS
T ss_pred EEEEECCEEEE---EEeC-CCHHHHHHHHHHHhcccc
Confidence 99999877653 6777 577889999999986543
No 96
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.63 E-value=5.1e-16 Score=116.07 Aligned_cols=100 Identities=18% Similarity=0.335 Sum_probs=82.6
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEE
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 237 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~ 237 (313)
+.+..++..+..+.+...+++++|+||++||++|+.+.+.+.+++..+.+ +.++.+|++.+.. .++++.++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 34455555444443446789999999999999999999999999998864 8999999998765 789999999999
Q ss_pred EEeCCCCCcCceeeccCcCHHHHHHHHHh
Q 021368 238 FFPAGNKSFDPINVDVDRTVVALYKFLKK 266 (313)
Q Consensus 238 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~ 266 (313)
+|++|+.+. ++.|.. .+.|.+||++
T Consensus 89 ~~~~G~~~~---~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDGQLIG---KIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETTEEEE---EEESSC-HHHHHHHHHT
T ss_pred EEeCCeEEE---EEeCCC-HHHHHHHHHh
Confidence 999888764 788877 8999999975
No 97
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.62 E-value=8e-16 Score=114.21 Aligned_cols=101 Identities=14% Similarity=0.217 Sum_probs=84.7
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEE
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 239 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~ 239 (313)
+..++.++| +.+ ..+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+.. .++++.++|++++|
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 345778899 655 357899999999999999999999999998764 58899999987765 78999999999999
Q ss_pred eCCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 240 PAGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 240 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
++|+.+. ++.|..+.+.|.+++.+..+.
T Consensus 80 ~~G~~v~---~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 RDGKVAK---VFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp ESSSEEE---EEESCCCHHHHHHHHHTC---
T ss_pred ECCEEEE---EEcCCCCHHHHHHHHHHHhhh
Confidence 9888765 888989999999999988653
No 98
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.61 E-value=2.7e-15 Score=119.92 Aligned_cols=116 Identities=13% Similarity=0.072 Sum_probs=96.4
Q ss_pred HHHHHhcCCCceEEeCCCcccccccCC--CccEEEEEe-------eC-CchhhhhHHHHHHHHhcc-----CeEEEEEEe
Q 021368 23 ADFVFSNKLPLVTIFTRENAPSVFESP--IKNQLLLFA-------VS-NDSEKLLPVFEEAAKSFK-----GKLIFVYVQ 87 (313)
Q Consensus 23 ~~fi~~~~~~~v~~lt~~~~~~~~~~~--~~~~v~f~~-------~~-~~c~~~~~~~~~~a~~~~-----~~v~f~~vd 87 (313)
.+++.....+.|.+||+++|++++..+ ..++|.|++ .| ++|+.+.|+|+++|.++. +++.|+.||
T Consensus 9 ~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD 88 (178)
T 3ga4_A 9 DDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVD 88 (178)
T ss_dssp HHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEE
T ss_pred HHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEE
Confidence 345555556789999999999987543 346777888 48 999999999999999998 889999999
Q ss_pred CCCcccccchhhhhCCCCCCCcEEEEEcCCCCce-----------ecc--C-C-CCCHHHHHHHHHHHhcC
Q 021368 88 MDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKK-----------HIL--D-G-ELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 88 ~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~-----------~~~--~-g-~~~~~~i~~fi~~~~~~ 143 (313)
+++ ++.++++|||++. |++++|.+|.... +.| . | .++++.|.+||.+.++-
T Consensus 89 ~d~---~~~la~~~~I~si--Ptl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~ 154 (178)
T 3ga4_A 89 VNE---VPQLVKDLKLQNV--PHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNI 154 (178)
T ss_dssp TTT---CHHHHHHTTCCSS--CEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTC
T ss_pred Ccc---CHHHHHHcCCCCC--CEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCC
Confidence 998 7899999999999 9999999886433 334 2 4 79999999999998873
No 99
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.60 E-value=1.4e-15 Score=114.82 Aligned_cols=103 Identities=22% Similarity=0.502 Sum_probs=88.0
Q ss_pred CCeEEEcC-cChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 160 GDVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 160 ~~v~~l~~-~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
..+..++. ++|++.+ ..+++++|+||++||++|+.+.+.|.+++..+.+. ++.++.+|++.+.. ..+++.++|++
T Consensus 15 ~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~~~~~~~~v~~~Pt~ 92 (121)
T 2j23_A 15 GSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQSQIAQEVGIRAMPTF 92 (121)
T ss_dssp CCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred cceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCHHHHHHcCCCcccEE
Confidence 45666666 7888877 67899999999999999999999999999877652 38999999998765 78999999999
Q ss_pred EEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 237 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 237 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|++|..+. .+.|. +.+.|.+||.+.+
T Consensus 93 ~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 93 VFFKNGQKID---TVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEETTEEEE---EEESS-CHHHHHHHHHHHT
T ss_pred EEEECCeEEe---eEcCC-CHHHHHHHHHHhh
Confidence 9999887654 78887 9999999999875
No 100
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.60 E-value=5.1e-16 Score=120.55 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=75.8
Q ss_pred CeEEEcCcChHHHhhcCCCcEEEEEeCCC--CccchhhhHHHHHHHHHhcCCCcEE--EEEEeCCCccc--ccCCCCcCc
Q 021368 161 DVKIVVGNNFDEIVLDESKDVLLEIYAPW--CGHCQAFEPTYNKLAKHLRGVDSIV--IAKMDGTTNEH--HRAKSDGFP 234 (313)
Q Consensus 161 ~v~~l~~~~f~~~l~~~~k~~lv~fy~~~--C~~C~~~~~~~~~la~~~~~~~~v~--~~~vd~~~~~~--~~~~v~~~P 234 (313)
.+..++.++|++.+. ..+.++|+|++.| |++|+.+.|.|.+++..+ + .+. |+.+|++.+.. .+|+|.++|
T Consensus 18 ~~~~l~~~~f~~~i~-~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIK-RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHH-hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 467889999999885 4556888999877 999999999999999988 4 577 99999998765 789999999
Q ss_pred eEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCCc
Q 021368 235 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 272 (313)
Q Consensus 235 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~ 272 (313)
|+++|++|+.+. ++.|..+.+.|.+||++.+..+.
T Consensus 94 T~~~fk~G~~v~---~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 94 ATLVFTDGKLRG---ALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp EEEEESCC-------CEESCCCHHHHHHHHHHHHC---
T ss_pred eEEEEeCCEEEE---EEeCCCCHHHHHHHHHHHhcccc
Confidence 999999998765 89999999999999999875433
No 101
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.60 E-value=3e-15 Score=116.39 Aligned_cols=101 Identities=15% Similarity=0.190 Sum_probs=82.7
Q ss_pred cCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCC
Q 021368 166 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAG 242 (313)
Q Consensus 166 ~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g 242 (313)
+.++|++.+.+ .+++++|+||++||++|+.+.|.+.+++..+.+ .+.++.+|++.+.. .+|++.++|++++|++|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G 87 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRN 87 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHHHHHHcCCCCCCEEEEEECC
Confidence 45788877765 689999999999999999999999999999976 69999999998875 78999999999999988
Q ss_pred CCCcC------ceeeccCc-CHHHHHHHHHhcC
Q 021368 243 NKSFD------PINVDVDR-TVVALYKFLKKNA 268 (313)
Q Consensus 243 ~~~~~------~~~y~g~~-~~~~l~~fi~~~~ 268 (313)
..+.. ...+.|.. +.+.|.++|.+.+
T Consensus 88 ~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 88 KHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp EEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 76520 01245544 4888999998875
No 102
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.60 E-value=3.3e-16 Score=120.79 Aligned_cols=103 Identities=17% Similarity=0.289 Sum_probs=86.7
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeC---------CCccc--cc
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG---------TTNEH--HR 227 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~---------~~~~~--~~ 227 (313)
.+.+..++.++|.+.+.. +++|+||++||++|+.+.|.|.+++..+. +.|+.+|+ +.+.. .+
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 356888999999998843 99999999999999999999999998764 78888888 33333 58
Q ss_pred CCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCCC
Q 021368 228 AKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 228 ~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 271 (313)
|++.++|++++|++|+.+. ++.|..+.+.+.+++++.+...
T Consensus 88 ~~v~~~Pt~~~~~~G~~v~---~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 88 AGVEGTPTLVFYKEGRIVD---KLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HTCCSSSEEEEEETTEEEE---EEESCCCHHHHHHHHHHHC---
T ss_pred cCCceeCeEEEEcCCEEEE---EEeCCCCHHHHHHHHHHHhCCC
Confidence 9999999999999888765 8999999999999999987543
No 103
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.60 E-value=1.7e-15 Score=113.93 Aligned_cols=104 Identities=15% Similarity=0.233 Sum_probs=85.3
Q ss_pred CeEEE--cCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceE
Q 021368 161 DVKIV--VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 236 (313)
Q Consensus 161 ~v~~l--~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i 236 (313)
.|..+ +..+|.+.+.+.+++++|+||++||++|+.+.+.|.+++..+ . ++.|+.+|++.+.. ..|++.++|++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~--~v~~~~vd~~~~~~~~~~~~i~~~Pt~ 80 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K--DVTFIKVDVDKNGNAADAYGVSSIPAL 80 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T--TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C--CeEEEEEECCCCHHHHHhcCCCCCCEE
Confidence 46667 567888777667899999999999999999999999999998 3 69999999998765 78999999999
Q ss_pred EEEeC----CCCCcCceeeccCcCHHHHHHHHHhcCCCC
Q 021368 237 LFFPA----GNKSFDPINVDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 237 ~~~~~----g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 271 (313)
++|++ |..+. ++.|.. ...|.+.+.++...+
T Consensus 81 ~~~~~~~~~G~~~~---~~~G~~-~~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 81 FFVKKEGNEIKTLD---QFVGAD-VSRIKADIEKFKHHH 115 (118)
T ss_dssp EEEEEETTEEEEEE---EEESCC-HHHHHHHHHHHC---
T ss_pred EEEeCCCCcceEEE---eecCCC-HHHHHHHHHHhhhcc
Confidence 99987 65543 677854 456999999987654
No 104
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.39 E-value=7.3e-17 Score=118.42 Aligned_cols=101 Identities=30% Similarity=0.534 Sum_probs=88.8
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEE
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 239 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~ 239 (313)
|..++.++|.+.+...+++++|+||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+.. ..+++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 567888999988877789999999999999999999999999998875 68999999987765 78999999999999
Q ss_pred eCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 240 PAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 240 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
++|+.+. .+.|..+.+.|.+||++.
T Consensus 81 ~~g~~~~---~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 81 KNGQVVD---RLVGAQPKEALKERIDKH 105 (106)
Confidence 8887654 788988889999999865
No 105
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.60 E-value=4.4e-15 Score=125.48 Aligned_cols=104 Identities=21% Similarity=0.352 Sum_probs=90.3
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEe--CCCCccchhhhHHHHHHHHHhcC-CCcEEEEEEeCCC-----ccc--ccC
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIY--APWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT-----NEH--HRA 228 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy--~~~C~~C~~~~~~~~~la~~~~~-~~~v~~~~vd~~~-----~~~--~~~ 228 (313)
...|..|+..+|++.+ +.+++++|.|| +|||+ +.|.|.++|..+.+ .+.+.|+.|||+. +.. .+|
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp CTTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 3568899999999955 67789999999 99998 99999999999965 4479999999998 443 789
Q ss_pred CCC--cCceEEEEeCCCCCcCceee--ccCcCHHHHHHHHHhcCC
Q 021368 229 KSD--GFPTILFFPAGNKSFDPINV--DVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 229 ~v~--~~P~i~~~~~g~~~~~~~~y--~g~~~~~~l~~fi~~~~~ 269 (313)
+|. ++||+++|+ |... .+..| .|..+.+.|.+||+++++
T Consensus 90 ~V~~~~~PTl~~F~-G~~~-~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNAD-EYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp TCCTTSCCEEEEES-SSSS-SEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCCcCCCCeEEEEe-CCcC-cceeecccCCCCHHHHHHHHHHhhc
Confidence 999 999999999 8732 45688 999999999999999987
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.59 E-value=2.2e-15 Score=114.56 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=79.1
Q ss_pred cCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEe--CCCccc--ccCCCCcCceEEEEe-CCCCCcCcee
Q 021368 176 DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMD--GTTNEH--HRAKSDGFPTILFFP-AGNKSFDPIN 250 (313)
Q Consensus 176 ~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd--~~~~~~--~~~~v~~~P~i~~~~-~g~~~~~~~~ 250 (313)
..+++++|+||++||++|+.+.+.+.+++..++. ++.++.+| ++.+.. ..|++.++|++++|. +|+.+. .
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~---~ 98 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFY---V 98 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEE---E
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEE---E
Confidence 5678999999999999999999999999999874 69999999 776554 789999999999998 676653 7
Q ss_pred eccCcCHHHHHHHHHhcCCCC
Q 021368 251 VDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 251 y~g~~~~~~l~~fi~~~~~~~ 271 (313)
+.|..+.+.|.+||++++...
T Consensus 99 ~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 99 HQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp EESCCCHHHHHHHHHHHCCCC
T ss_pred ecCCCCHHHHHHHHHHHhccc
Confidence 889999999999999997543
No 107
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.59 E-value=2.8e-15 Score=112.31 Aligned_cols=103 Identities=22% Similarity=0.397 Sum_probs=88.0
Q ss_pred CCeEEE-cCcChHHHhhc---CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcC
Q 021368 160 GDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGF 233 (313)
Q Consensus 160 ~~v~~l-~~~~f~~~l~~---~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~ 233 (313)
+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+.. ..+++.++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~ 82 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVAEAYNVEAM 82 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSB
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHHHHcCCCcC
Confidence 456677 56888888854 47899999999999999999999999999886 48999999998765 78999999
Q ss_pred ceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 234 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 234 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
|++++|++|..+. .+.| .+.+.|.++|.+.+.
T Consensus 83 Pt~~~~~~g~~~~---~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 83 PTFLFIKDGEKVD---SVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp SEEEEEETTEEEE---EEES-CCHHHHHHHHHHHHC
T ss_pred cEEEEEeCCeEEE---EecC-CCHHHHHHHHHHHhc
Confidence 9999999888764 6778 588999999998864
No 108
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.59 E-value=1.3e-14 Score=110.67 Aligned_cols=107 Identities=20% Similarity=0.185 Sum_probs=94.8
Q ss_pred CCceEEeCCCcccc-cccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 31 LPLVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 31 ~~~v~~lt~~~~~~-~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
.+.+..++.++|+. +...+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. +..++++|+|.++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~~-- 90 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADK---HQSLGGQYGVQGF-- 90 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTT---CHHHHHHHTCCSS--
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCC---CHHHHHHcCCCcc--
Confidence 45688999999998 4456678889999999 999999999999999999889999999998 6699999999999
Q ss_pred cEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 109 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|++++++.+......+.|.++.+.|.+|+.+.+.
T Consensus 91 Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 91 PTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp SEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 9999998876546678999999999999998864
No 109
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.58 E-value=2.5e-15 Score=111.71 Aligned_cols=102 Identities=21% Similarity=0.374 Sum_probs=86.7
Q ss_pred CCeEEE-cCcChHHHhhc---CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcC
Q 021368 160 GDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGF 233 (313)
Q Consensus 160 ~~v~~l-~~~~f~~~l~~---~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~ 233 (313)
+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+.. ..+++.++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVAEEWNVEAM 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHHHHHHCSST
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHHHhCCCCcc
Confidence 456777 56889988854 47899999999999999999999999999875 59999999998765 78999999
Q ss_pred ceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 234 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 234 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
|++++|++|..+. .+.| .+.+.|.++|.+.+
T Consensus 81 Pt~~~~~~G~~~~---~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 81 PTFIFLKDGKLVD---KTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp TEEEEEETTEEEE---EEEC-CCTTHHHHHHHHHH
T ss_pred cEEEEEeCCEEEE---EEec-CCHHHHHHHHHHhh
Confidence 9999999887654 6777 57788999998764
No 110
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.58 E-value=4.1e-15 Score=115.01 Aligned_cols=104 Identities=20% Similarity=0.342 Sum_probs=88.4
Q ss_pred CCCeEEEc-CcChHHHhh---cCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCc
Q 021368 159 DGDVKIVV-GNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG 232 (313)
Q Consensus 159 ~~~v~~l~-~~~f~~~l~---~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~ 232 (313)
...+..++ .++|.+.+. ..+++++|+||++||++|+.+.+.+.+++..+. ++.++.+|++.+.. ..|++.+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 99 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSASWEIKA 99 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCE
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHHcCCCc
Confidence 45566664 689998774 347899999999999999999999999999884 58999999998765 7899999
Q ss_pred CceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 233 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 233 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+|++++|++|..+. .+.|. +.+.|.++|.+.+.
T Consensus 100 ~Pt~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 100 TPTFFFLRDGQQVD---KLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp ESEEEEEETTEEEE---EEESC-CHHHHHHHHHHHHH
T ss_pred ccEEEEEcCCeEEE---EEeCC-CHHHHHHHHHHHhc
Confidence 99999998887764 67787 88999999998864
No 111
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.58 E-value=7.1e-15 Score=124.32 Aligned_cols=129 Identities=17% Similarity=0.195 Sum_probs=113.9
Q ss_pred CCcccccCCCCCCHHHHHHHHHhcCCC-------ceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhc
Q 021368 6 TEKISYFADGKFDKSTIADFVFSNKLP-------LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSF 77 (313)
Q Consensus 6 ~~~~~~y~~g~~~~~~l~~fi~~~~~~-------~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~ 77 (313)
++..+.| .|..+..+|..|+.....+ .+..++.++|+..+.....++|.||++| ++|+.+.|.|.+++.++
T Consensus 98 ~g~~~~~-~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~ 176 (241)
T 3idv_A 98 KGQAVDY-EGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKEL 176 (241)
T ss_dssp TTEEEEC-CSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHH
T ss_pred CCCcccc-cCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHH
Confidence 4566789 9999999999999876443 5788999999998888888899999999 99999999999999999
Q ss_pred cCe---EEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 78 KGK---LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 78 ~~~---v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
.+. +.|+.|||+. ++.++++|||.++ |++++|++|. ...|.|.++.+.|.+|+.+.++
T Consensus 177 ~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~~~~g~--~~~~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 177 SKRSPPIPLAKVDATA---ETDLAKRFDVSGY--PTLKIFRKGR--PYDYNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp HTSSSCCCEEEEETTT---CHHHHHHTTCCSS--SEEEEEETTE--EEECCSCCSHHHHHHHHHHHTT
T ss_pred hccCCcEEEEEEECCC---CHHHHHHcCCccc--CEEEEEECCe--EEEecCCCCHHHHHHHHHhhhC
Confidence 764 9999999998 6699999999999 9999998764 4568999999999999999865
No 112
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=1.3e-14 Score=112.27 Aligned_cols=107 Identities=13% Similarity=0.167 Sum_probs=95.8
Q ss_pred CceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe---EEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 32 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 32 ~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~---v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
..+..++.++|+..+..+..++|+||++| ++|+.+.|.|.+++.++.+. +.|+.|||++ +..++++|+|.++
T Consensus 17 ~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---~~~~~~~~~v~~~- 92 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS---ASMLASKFDVSGY- 92 (140)
T ss_dssp TTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT---CHHHHHHTTCCSS-
T ss_pred CCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc---cHHHHHHCCCCcc-
Confidence 46889999999998888888999999999 99999999999999999875 9999999998 6699999999998
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCC
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
|+++++.+|. ...+.|.++.+.|.+|+.+.+....
T Consensus 93 -Pt~~~~~~G~--~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 93 -PTIKILKKGQ--AVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp -SEEEEEETTE--EEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred -CeEEEEECCc--EEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 9999997664 5678899999999999999987544
No 113
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.57 E-value=2.3e-15 Score=113.11 Aligned_cols=97 Identities=14% Similarity=0.230 Sum_probs=79.7
Q ss_pred CeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc------c--ccCCCCc
Q 021368 161 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------H--HRAKSDG 232 (313)
Q Consensus 161 ~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~------~--~~~~v~~ 232 (313)
.+..++.++|.+.+ ..+++++|+||++||++|+.+.|.+.+++..+.. .+.++ |++... . .++++.+
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~--~~~~~~~~~~~~~~~~~~~i~~ 87 (118)
T 1zma_A 13 DLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFI--NSEEPSQLNDLQAFRSRYGIPT 87 (118)
T ss_dssp TSEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEE--ETTCGGGHHHHHHHHHHHTCCS
T ss_pred hhhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEE--ECCCcCcHHHHHHHHHHcCCCC
Confidence 46778889999887 4578999999999999999999999999998864 35444 544432 1 5789999
Q ss_pred CceEEEEeCCCCCcCceeeccCcCHHHHHHHHH
Q 021368 233 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLK 265 (313)
Q Consensus 233 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~ 265 (313)
+|++++|++|..+. ++.|..+.+.|.+||+
T Consensus 88 ~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 88 VPGFVHITDGQINV---RCDSSMSAQEIKDFAG 117 (118)
T ss_dssp SCEEEEEETTEEEE---ECCTTCCHHHHHHHHT
T ss_pred CCeEEEEECCEEEE---EecCCCCHHHHHHHhh
Confidence 99999999888754 7899999999999985
No 114
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.57 E-value=2.4e-15 Score=115.64 Aligned_cols=104 Identities=11% Similarity=0.241 Sum_probs=85.6
Q ss_pred CCCeEEEcC-cChHHHhhcC-CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCc
Q 021368 159 DGDVKIVVG-NNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFP 234 (313)
Q Consensus 159 ~~~v~~l~~-~~f~~~l~~~-~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P 234 (313)
...+..++. ++|.+.+... +++++|+||++||++|+.+.+.|.+++..+ .+.++.+|++.+.. .+|++.++|
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~~~v~~~P 94 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQHNIKALP 94 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHhcCCCCCC
Confidence 456777875 7888877543 579999999999999999999999988766 48999999998765 789999999
Q ss_pred eEEEEe--CCC--CCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 235 TILFFP--AGN--KSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 235 ~i~~~~--~g~--~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
++++|+ +|+ .+. ++.|. +.+.|.++|.+.+..
T Consensus 95 t~~~~~~~~g~g~~~~---~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVH---TVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp EEEEEEEETTEEEEEE---EEESC-CHHHHHHHHHHHSEE
T ss_pred EEEEEEecCCCeEEEE---EEcCC-CHHHHHHHHHHHHHh
Confidence 999996 776 332 67786 889999999998753
No 115
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.57 E-value=1.8e-14 Score=121.34 Aligned_cols=103 Identities=20% Similarity=0.350 Sum_probs=89.1
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeC--CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-----ccc--ccCCC
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYA--PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----NEH--HRAKS 230 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~--~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-----~~~--~~~~v 230 (313)
..|..|+..+|++.+ +.+++++|.||+ |||+ +.|.|.+++..+.+.+.+.|+.||++. +.. .+|+|
T Consensus 5 ~~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 468899999999976 567899999999 9999 999999999999765579999999654 443 78999
Q ss_pred C--cCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 231 D--GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 231 ~--~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
. ++||+++|++|... .+..|.|..+.+.|.+||++++
T Consensus 80 ~~~~~PTl~~f~~G~~~-~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFE-NPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSS-CCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcC-cceeecCCCCHHHHHHHHHHhc
Confidence 9 99999999999821 3568999999999999999996
No 116
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.54 E-value=3.7e-14 Score=104.41 Aligned_cols=104 Identities=18% Similarity=0.268 Sum_probs=90.0
Q ss_pred CceEEeCCCccccc-ccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 32 PLVTIFTRENAPSV-FESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 32 ~~v~~lt~~~~~~~-~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
+.|..++.++|+.. ...+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|||.++ |
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--P 76 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ---NPGTAPKYGIRGI--P 76 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT---CTTHHHHTTCCSS--S
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC---CHHHHHHcCCccc--C
Confidence 46789999999854 456678888999999 999999999999999999889999999998 6699999999999 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
+++++.+|. ....+.|..+.+.|.+|+.+.+
T Consensus 77 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 77 TLLLFKNGE-VAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCE-EEEEEecCCCHHHHHHHHHHhh
Confidence 998886553 3445688999999999999875
No 117
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.54 E-value=1.3e-14 Score=106.94 Aligned_cols=105 Identities=16% Similarity=0.240 Sum_probs=93.9
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
.+.+..++.++|+..+..+..++|+||++| ++|+.+.|.|.+++..+.+.+.|+.||++. ++.++++|+|.++ |
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~i~~~--P 77 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDE---NQKIADKYSVLNI--P 77 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT---CHHHHHHTTCCSS--S
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEcccc---CHHHHHhcCcccC--C
Confidence 457889999999999888888999999999 999999999999999999889999999998 6799999999999 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
+++++.+|. ....+.|..+.+.|.+++.+++
T Consensus 78 t~~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 78 TTLIFVNGQ-LVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEEEETTE-EEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEEcCCc-EEEeeeccCCHHHHHHHHHHHh
Confidence 998886554 3455789999999999999875
No 118
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.54 E-value=3.2e-14 Score=105.88 Aligned_cols=107 Identities=16% Similarity=0.225 Sum_probs=92.4
Q ss_pred CCCceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 30 KLPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
+.+.+..++.++|+..+ ..+..++|+||++| ++|+.+.|.|.+++..+.+.+.|+.||++. ++.++++|||.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~---~~~~~~~~~v~~~- 80 (115)
T 1thx_A 5 MSKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDP---NPTTVKKYKVEGV- 80 (115)
T ss_dssp -CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTT---CHHHHHHTTCCSS-
T ss_pred ccCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCC---CHHHHHHcCCCce-
Confidence 44568999999998754 56678888999999 999999999999999999889999999998 6699999999998
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+++++.+|. ....+.|..+.+.|.+|+.+.++
T Consensus 81 -Pt~~~~~~G~-~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 81 -PALRLVKGEQ-ILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp -SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHHC
T ss_pred -eEEEEEcCCE-EEEEecCCCCHHHHHHHHHHHhc
Confidence 9998986553 34457899999999999999876
No 119
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.54 E-value=1.3e-14 Score=107.38 Aligned_cols=104 Identities=17% Similarity=0.316 Sum_probs=92.1
Q ss_pred ceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcE
Q 021368 33 LVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 110 (313)
Q Consensus 33 ~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~ 110 (313)
.+..++.++|+..+ ..+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|+|.++ |+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt 79 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE---EKTLFQRFSLKGV--PQ 79 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT---CHHHHHHTTCCSS--CE
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc---ChhHHHhcCCCcC--CE
Confidence 47788999999988 67778889999999 999999999999999999889999999998 6699999999999 99
Q ss_pred EEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 111 LAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 111 i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
++++.+|. ....+.|..+.+.|.+|+.+.++
T Consensus 80 ~~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 80 ILYFKDGE-YKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEEETTE-EEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEECCE-EEEEEeccCCHHHHHHHHHHHhc
Confidence 99997654 34457899999999999999864
No 120
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.53 E-value=2.1e-14 Score=109.32 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=91.1
Q ss_pred ceEEeCCCcccccccCCC-ccEEEEEeeC---CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 33 LVTIFTRENAPSVFESPI-KNQLLLFAVS---NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 33 ~v~~lt~~~~~~~~~~~~-~~~v~f~~~~---~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
.+..+|.++|+..+.... +++|.||++| ++|+.+.|++.+++.+|.+++.|++||.++ ++.++.+|||++.
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe---~~~la~~ygV~si-- 90 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEA---ERGLMARFGVAVC-- 90 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGG---HHHHHHHHTCCSS--
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCC---CHHHHHHcCCccC--
Confidence 456899999998776555 7888899988 899999999999999999999999999998 7799999999999
Q ss_pred cEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 109 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
||+++|++|+. .-...|..+.+.|.+++.+++.
T Consensus 91 PTlilFkdG~~-v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 91 PSLAVVQPERT-LGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp SEEEEEECCEE-EEEEESCCCHHHHHHHHHHHHH
T ss_pred CEEEEEECCEE-EEEEeCCCCHHHHHHHHHHHhc
Confidence 99999998863 3446789999999999998873
No 121
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.53 E-value=4.5e-14 Score=119.26 Aligned_cols=147 Identities=13% Similarity=0.032 Sum_probs=114.2
Q ss_pred CCceEEeCCCcccccccCCCccEEEEE--eeCCchhhhhHHHHHHHHhcc---CeEEEEEEeCCCc--ccccchhhhhCC
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLF--AVSNDSEKLLPVFEEAAKSFK---GKLIFVYVQMDNE--DVGKPVSEYFGI 103 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~--~~~~~c~~~~~~~~~~a~~~~---~~v~f~~vd~~~~--~~~~~l~~~~~v 103 (313)
.+.+..|++.+|+.++.....++|.|| ++| |. +.|.|+++|..+. +.+.|+.|||+++ ..++.+|++|||
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApW--Cg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V 91 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPY--GE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV 91 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCC--SH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTC
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCC--Cc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCC
Confidence 446889999999998877778899999 787 33 9999999999994 4799999999982 115699999999
Q ss_pred C--CCCCcEEEEEcCCC-Cceecc--CCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCC
Q 021368 104 T--GEAPKVLAYTGNDD-AKKHIL--DGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDES 178 (313)
Q Consensus 104 ~--~~~~P~i~~~~~~~-~~~~~~--~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~ 178 (313)
+ ++ ||+++|. |. .....| .|.++.+.|.+|+.+.++.. .+ . .+. -..++.++.
T Consensus 92 ~~~~~--PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~-----~~--~----~g~-----i~~~d~l~~--- 149 (248)
T 2c0g_A 92 DDKNF--PSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLY-----IG--R----DGC-----IKEFNEVLK--- 149 (248)
T ss_dssp CTTSC--CEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCC-----CC--C----TTC-----CHHHHHHHT---
T ss_pred CcCCC--CeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccc-----cC--C----CCc-----hHHHHHHHH---
Confidence 9 89 9999998 65 345677 89999999999999986511 00 0 111 134555543
Q ss_pred CcEEEEEeCCCCccchhhhHHHHHHHHHh
Q 021368 179 KDVLLEIYAPWCGHCQAFEPTYNKLAKHL 207 (313)
Q Consensus 179 k~~lv~fy~~~C~~C~~~~~~~~~la~~~ 207 (313)
.|.+.||..|..+...+++++..+
T Consensus 150 -----~f~~~~~~~~~~~~~~~~~~~~~l 173 (248)
T 2c0g_A 150 -----NYANIPDAEQLKLIEKLQAKQEQL 173 (248)
T ss_dssp -----TGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred -----HHhcccchhHHHHHHHHHHHHHHc
Confidence 277888999988888888877765
No 122
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.53 E-value=2.9e-14 Score=105.95 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=90.3
Q ss_pred eEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEE
Q 021368 34 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 112 (313)
Q Consensus 34 v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~ 112 (313)
+..++.++|++.+ .+..++|.||++| ++|+.+.|.|.+++.++.+.+.|+.||+++ ++.++++|||.++ |+++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE---NQETAGKYGVMSI--PTLL 76 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT---CCSHHHHTTCCSB--SEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC---CHHHHHHcCCCcc--cEEE
Confidence 5689999999888 7778889999999 999999999999999998889999999998 6699999999999 9998
Q ss_pred EEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 113 YTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
++.+|. ....+.|..+.+.|.+|+.+.+.
T Consensus 77 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 77 VLKDGE-VVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHHHTTSC
T ss_pred EEeCCE-EEEEEeCCCCHHHHHHHHHHHHH
Confidence 886553 34567899999999999998865
No 123
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.53 E-value=6.1e-14 Score=131.08 Aligned_cols=114 Identities=25% Similarity=0.397 Sum_probs=95.5
Q ss_pred CCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcC-CCcEEEEEEeCCC--ccc--ccCCCCcC
Q 021368 159 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT--NEH--HRAKSDGF 233 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~-~~~v~~~~vd~~~--~~~--~~~~v~~~ 233 (313)
.+.|..++.++|++.+.+.+++++|+|||+||++|+.+.|.|.+++..+.+ ...+.|+.+||+. +.. .+|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 467999999999999987789999999999999999999999999999976 3369999999975 322 78999999
Q ss_pred ceEEEEeCCCCCcC-ceeeccCcCHHHHHHHHHhcCCCCc
Q 021368 234 PTILFFPAGNKSFD-PINVDVDRTVVALYKFLKKNASIPF 272 (313)
Q Consensus 234 P~i~~~~~g~~~~~-~~~y~g~~~~~~l~~fi~~~~~~~~ 272 (313)
|++++|.+|..... ...+.|..+.+.|.++|.+.+....
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 99999997654211 2356678999999999999976433
No 124
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.52 E-value=2.4e-15 Score=137.40 Aligned_cols=99 Identities=16% Similarity=0.276 Sum_probs=82.2
Q ss_pred CCCeEEEcCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCC------cEEEEEEeCCCccc--ccCC
Q 021368 159 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVD------SIVIAKMDGTTNEH--HRAK 229 (313)
Q Consensus 159 ~~~v~~l~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~------~v~~~~vd~~~~~~--~~~~ 229 (313)
...|..++.++|++.+.. ..++++|+|||+||++|+.+.|.|.+++..+.... .+.|+.||++.+.. .+|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 567999999999998853 34799999999999999999999999999997432 49999999998865 7899
Q ss_pred CCcCceEEEEeCCCCCcCceeeccCcCHH
Q 021368 230 SDGFPTILFFPAGNKSFDPINVDVDRTVV 258 (313)
Q Consensus 230 v~~~P~i~~~~~g~~~~~~~~y~g~~~~~ 258 (313)
|.++||+++|.+|... .+..|.|..+.+
T Consensus 102 V~~~PTlilf~~gg~~-~~~~y~G~r~~e 129 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSC-RSNEECGTSSLE 129 (470)
T ss_dssp CCSSCEEEEEEESSCC-CTTSCCCCCCEE
T ss_pred CCccCeEEEEECCCce-EEEEeeCCCCHH
Confidence 9999999999766543 455788754433
No 125
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=4.1e-14 Score=108.26 Aligned_cols=107 Identities=19% Similarity=0.180 Sum_probs=94.1
Q ss_pred CCceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhcc----CeEEEEEEeCCCcccccchhhhhCCC
Q 021368 31 LPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK----GKLIFVYVQMDNEDVGKPVSEYFGIT 104 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~----~~v~f~~vd~~~~~~~~~l~~~~~v~ 104 (313)
...+..++.++|+..+ ..+..++|+||++| ++|+.+.|.|.+++.++. +.+.|+.|||+. ++.++++|+|.
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~ 82 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV---NQVLASRYGIR 82 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT---CCHHHHHHTCC
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC---CHHHHHhCCCC
Confidence 4568899999999865 56677888999999 999999999999999998 679999999998 66999999999
Q ss_pred CCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 105 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 105 ~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
++ |++++++.|. ....+.|.++.+.|.+|+.+.+..
T Consensus 83 ~~--Pt~~~~~~g~-~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 83 GF--PTIKIFQKGE-SPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp SS--SEEEEEETTE-EEEEECSCCSHHHHHHHHHHHHHH
T ss_pred ee--CeEEEEeCCC-ceEEecCCCCHHHHHHHHHHHhhc
Confidence 99 9999998754 456688999999999999998864
No 126
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.52 E-value=3.5e-14 Score=104.11 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=90.1
Q ss_pred ceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEE
Q 021368 33 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 33 ~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i 111 (313)
.+..++.++|+..+ .+..++|+||++| ++|+.+.|.|.+++.++.+++.|+.||++. ++.++++|+|.++ |++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~ 77 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDE---NPSTAAKYEVMSI--PTL 77 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSB--SEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCc---CHHHHHhCCCccc--CEE
Confidence 57889999999988 7778899999999 999999999999999999989999999998 6699999999999 999
Q ss_pred EEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 112 AYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
+++++|. ....+.|..+.+.|.+|+.++
T Consensus 78 ~~~~~G~-~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 78 IVFKDGQ-PVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEEETTE-EEEEEESCCCHHHHHHHHHTT
T ss_pred EEEeCCe-EEEEEeCCCCHHHHHHHHHHh
Confidence 9997554 344678999999999999875
No 127
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.52 E-value=5.5e-14 Score=107.67 Aligned_cols=110 Identities=11% Similarity=0.250 Sum_probs=93.8
Q ss_pred CCCceEEeCCCcccccccC-CCccEEEEEeeC-CchhhhhHHHHHHHHhcc--CeEEEEEEeCCCcccccchhhhhCCCC
Q 021368 30 KLPLVTIFTRENAPSVFES-PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK--GKLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~~~-~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~--~~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
..+.|..++.++|+..+.. +..++|+||++| ++|+.+.|.|.+++.++. +.+.|+.|||+. +..++++|+|.+
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~ 81 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA---NDITNDQYKVEG 81 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT---SCCCCSSCCCSS
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc---CHHHHhhcCCCc
Confidence 4567899999999997754 678888999999 999999999999999998 469999999998 558999999999
Q ss_pred CCCcEEEEEcCCCC-ceeccC-CCCCHHHHHHHHHHHhcCC
Q 021368 106 EAPKVLAYTGNDDA-KKHILD-GELTLDKIKTFGEDFLEGK 144 (313)
Q Consensus 106 ~~~P~i~~~~~~~~-~~~~~~-g~~~~~~i~~fi~~~~~~~ 144 (313)
+ |++++++.+.. ....+. |.++.+.|.+|+.+.+...
T Consensus 82 ~--Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 82 F--PTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp S--SEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred C--CEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 9 99999987653 234566 5699999999999998643
No 128
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.52 E-value=2e-14 Score=105.62 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=78.2
Q ss_pred CCccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEc
Q 021368 39 RENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTG 115 (313)
Q Consensus 39 ~~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~ 115 (313)
.++|++.+. .+..++|.||++| ++|+.+.|.|.+++..+.+ +.|+.||+++ +++++++|||+++ ||++++.
T Consensus 8 ~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~---~~~l~~~~~V~~~--PT~~~~~ 81 (105)
T 3zzx_A 8 QEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDE---CEDIAQDNQIACM--PTFLFMK 81 (105)
T ss_dssp HHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTT---CHHHHHHTTCCBS--SEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEeccc---CHHHHHHcCCCee--cEEEEEE
Confidence 356776553 2456777899999 9999999999999999987 8899999998 7799999999999 9999998
Q ss_pred CCCCceeccCCCCCHHHHHHHHHHH
Q 021368 116 NDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 116 ~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
+|.. ...+.| .+.+.|.+||.++
T Consensus 82 ~G~~-v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 82 NGQK-LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp TTEE-EEEEES-CCHHHHHHHHHHH
T ss_pred CCEE-EEEEeC-cCHHHHHHHHHhc
Confidence 7652 334566 6899999999874
No 129
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.52 E-value=5.4e-14 Score=107.23 Aligned_cols=106 Identities=18% Similarity=0.261 Sum_probs=90.8
Q ss_pred CCCceEEeCCCccccc-ccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 30 KLPLVTIFTRENAPSV-FESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~-~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
+...+..++.++|+.. ...+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||+++ ++.++++|+|.++
T Consensus 20 m~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~- 95 (128)
T 2o8v_B 20 HSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ---NPGTAPKYGIRGI- 95 (128)
T ss_dssp -CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT---CCTTSGGGTCCSS-
T ss_pred cccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC---CHHHHHHcCCCcc-
Confidence 3456889999999854 466778888999999 999999999999999999889999999998 5699999999999
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|+++++.+|. ....+.|..+.+.|.+|+.+.+
T Consensus 96 -Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 96 -PTLLLFKNGE-VAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp -SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred -CEEEEEeCCE-EEEEEcCCCCHHHHHHHHHHhh
Confidence 9998886553 3445789999999999999876
No 130
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.52 E-value=5.3e-14 Score=105.39 Aligned_cols=106 Identities=14% Similarity=0.215 Sum_probs=93.3
Q ss_pred CceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccC---eEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 32 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG---KLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 32 ~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~---~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
+.+..++.++|+..+..+..++|+||++| ++|+.+.|.|.+++..+.+ .+.|+.+||+. ++.++++|+|.++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---~~~~~~~~~v~~~- 82 (120)
T 1mek_A 7 DHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE---ESDLAQQYGVRGY- 82 (120)
T ss_dssp TTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT---CCSSHHHHTCCSS-
T ss_pred CCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC---CHHHHHHCCCCcc-
Confidence 45889999999998888888899999999 9999999999999999973 59999999998 5699999999999
Q ss_pred CcEEEEEcCCCCc-eeccCCCCCHHHHHHHHHHHhc
Q 021368 108 PKVLAYTGNDDAK-KHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 108 ~P~i~~~~~~~~~-~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+++++.+|... ...+.|..+.+.|.+|+.+.++
T Consensus 83 -Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 83 -PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp -SEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred -cEEEEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 999999766532 3678899999999999998765
No 131
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.51 E-value=2.6e-14 Score=104.74 Aligned_cols=102 Identities=18% Similarity=0.187 Sum_probs=89.5
Q ss_pred eEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEE
Q 021368 34 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 112 (313)
Q Consensus 34 v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~ 112 (313)
+..++.++|+.....+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||+++ ++.++++|||.++ |+++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~---~~~~~~~~~v~~~--Pt~~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE---NPETTSQFGIMSI--PTLI 76 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTT---CHHHHHHTTCCSS--SEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcC---CHHHHHHcCCccc--cEEE
Confidence 578999999988878888899999999 999999999999999999889999999998 6699999999999 9998
Q ss_pred EEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 113 YTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
++.+|. ....+.|..+.+.|.+++.+.+
T Consensus 77 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGGR-PVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHTTTTT
T ss_pred EEeCCe-EEEEEecCCCHHHHHHHHHHHh
Confidence 886553 3445789999999999988764
No 132
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.51 E-value=1.4e-13 Score=103.49 Aligned_cols=104 Identities=14% Similarity=0.195 Sum_probs=89.6
Q ss_pred CCceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-----eEEEEEEeCCCcccccchhhhhCC
Q 021368 31 LPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-----KLIFVYVQMDNEDVGKPVSEYFGI 103 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-----~v~f~~vd~~~~~~~~~l~~~~~v 103 (313)
.+.+..++.++|+..+ ..+..++|+||++| ++|+.+.|.|.+++.++.+ .+.|+.|||+.. .+++ +|
T Consensus 6 ~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~----~~~~--~v 79 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN----DVPD--EI 79 (121)
T ss_dssp SCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS----CCSS--CC
T ss_pred CCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc----cccc--cc
Confidence 4568899999999875 66778899999999 9999999999999999987 799999999873 3565 99
Q ss_pred CCCCCcEEEEEcCCCCc-eeccCCCCCHHHHHHHHHHHhc
Q 021368 104 TGEAPKVLAYTGNDDAK-KHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 104 ~~~~~P~i~~~~~~~~~-~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
.++ |++++++.++.. ...+.|.++.+.|.+|+.+.+.
T Consensus 80 ~~~--Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 80 QGF--PTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp SSS--SEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred CcC--CeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 988 999999877532 5678999999999999999865
No 133
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.51 E-value=7.8e-14 Score=102.36 Aligned_cols=103 Identities=14% Similarity=0.146 Sum_probs=89.0
Q ss_pred CceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 32 PLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 32 ~~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
+.+..++.++|+..+ ..+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|||.++ |
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--P 76 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD---NPETPNAYQVRSI--P 76 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT---CCHHHHHTTCCSS--S
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC---CHHHHHhcCCCcc--C
Confidence 358899999998654 56678888999999 999999999999999999889999999998 6699999999999 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
+++++.+|. ....+.|..+.+.|.+|+.+.
T Consensus 77 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 77 TLMLVRDGK-VIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEEEETTE-EEEEEESCCCHHHHHHHHHHT
T ss_pred EEEEEeCCE-EEEEecCCCCHHHHHHHHHhc
Confidence 998986554 344578999999999999875
No 134
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.51 E-value=7.5e-14 Score=109.10 Aligned_cols=107 Identities=19% Similarity=0.232 Sum_probs=95.7
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
...+..++.++|+..+..+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|+|.++ |
T Consensus 37 ~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~~--P 111 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEA---EPALSTRFRIRSI--P 111 (148)
T ss_dssp CCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSS--S
T ss_pred cCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcC---CHHHHHHCCCCcc--C
Confidence 456889999999998888888899999999 999999999999999998889999999998 6699999999999 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
+++++++|. ....+.|.++.+.|.+|+.+.+..
T Consensus 112 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 112 TIMLYRNGK-MIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEEEETTE-EEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEEEEECCe-EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999997654 344678999999999999999863
No 135
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.51 E-value=5.1e-14 Score=109.05 Aligned_cols=108 Identities=17% Similarity=0.242 Sum_probs=90.7
Q ss_pred cCCCceEEeCCCcccccccC------------CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCccccc
Q 021368 29 NKLPLVTIFTRENAPSVFES------------PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGK 95 (313)
Q Consensus 29 ~~~~~v~~lt~~~~~~~~~~------------~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~ 95 (313)
...+.+..++.++|...+.. +..++|.||++| ++|+.+.|.|.+++..+.+.+.|+.||++. ++
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~ 95 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDK---EP 95 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTT---CH
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCC---CH
Confidence 34557888888888876543 667888999999 999999999999999999889999999998 66
Q ss_pred chhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 96 PVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 96 ~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
.++++|||.++ |++++++.++. ...+.|.++.+.|.+|+.+++.
T Consensus 96 ~~~~~~~v~~~--Pt~~~~~~~g~-~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 96 ELARDFGIQSI--PTIWFVPMKGE-PQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHHHTTCCSS--SEEEEECSSSC-CEEEESCCCHHHHHHHHHHTTC
T ss_pred HHHHHcCCCCc--CEEEEEeCCCC-EEEEeCCCCHHHHHHHHHHHHc
Confidence 99999999999 99999965543 3467899999999999999875
No 136
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=5.4e-14 Score=106.75 Aligned_cols=106 Identities=17% Similarity=0.110 Sum_probs=92.5
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
.+.+..++.++|++++.. .++|.||++| ++|+.+.|.|.+++.++.+ .+.|+.||+++ +..++++|+|.++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~---~~~~~~~~~v~~~-- 78 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE---QPGLSGRFIINAL-- 78 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT---CHHHHHHTTCCSS--
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC---CHHHHHHcCCccc--
Confidence 457889999999987765 4888999999 9999999999999999986 69999999998 6699999999999
Q ss_pred cEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCC
Q 021368 109 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
|+++++.+|. ...+.|.++.+.|.+|+.+.+...+
T Consensus 79 Pt~~~~~~G~--~~~~~G~~~~~~l~~~l~~~~~~~~ 113 (126)
T 1x5e_A 79 PTIYHCKDGE--FRRYQGPRTKKDFINFISDKEWKSI 113 (126)
T ss_dssp SEEEEEETTE--EEECCSCCCHHHHHHHHHTCGGGGS
T ss_pred CEEEEEeCCe--EEEeecCCCHHHHHHHHHHHhhccC
Confidence 9999996654 4678999999999999999876444
No 137
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.50 E-value=2.6e-14 Score=110.72 Aligned_cols=107 Identities=16% Similarity=0.220 Sum_probs=94.5
Q ss_pred CCceEEeCCCccc-ccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 31 LPLVTIFTRENAP-SVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 31 ~~~v~~lt~~~~~-~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
.+.+..++.++|. .+...+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||+++ ++.++++|+|.++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~-- 79 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIAT---NPWTAEKYGVQGT-- 79 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT---CHHHHHHHTCCEE--
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCc---CHhHHHHCCCCcC--
Confidence 4678999999999 56677778889999999 999999999999999999999999999998 6699999999999
Q ss_pred cEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 109 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
|+++++.+|. ....+.|..+.+.|.+|+.+++..
T Consensus 80 Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 80 PTFKFFCHGR-PVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp SEEEEEETTE-EEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCc-EEEEEcCCCCHHHHHHHHHHHhcc
Confidence 9999997654 344678999999999999998863
No 138
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.50 E-value=3.2e-14 Score=104.69 Aligned_cols=104 Identities=15% Similarity=0.174 Sum_probs=91.4
Q ss_pred ceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEE
Q 021368 33 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 33 ~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i 111 (313)
.+.+++.++|+.+...+..++|+||++| ++|+.+.|.|.+++..+.+.+.|+.||++. ++.++++|+|.++ |++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~ 76 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE---NPKTAMRYRVMSI--PTV 76 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT---CHHHHHHTTCCSS--SEE
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC---CHhHHHhCCCCcC--CEE
Confidence 4778999999988887888899999999 999999999999999999889999999998 6699999999998 999
Q ss_pred EEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 112 AYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+++.+|. ....+.|..+.+.|.+|+.+.++
T Consensus 77 ~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 77 ILFKDGQ-PVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp EEEETTE-EEEEEESCCCHHHHHHHHHTTC-
T ss_pred EEEeCCc-EeeeEeCCCCHHHHHHHHHHHhh
Confidence 8886553 34457899999999999998765
No 139
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=2.6e-14 Score=109.04 Aligned_cols=103 Identities=20% Similarity=0.363 Sum_probs=83.7
Q ss_pred EEcCcChHHHhh---cCCCcEEEEEeCCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCCc--cc--ccCCCCcC
Q 021368 164 IVVGNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN--EH--HRAKSDGF 233 (313)
Q Consensus 164 ~l~~~~f~~~l~---~~~k~~lv~fy~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~~--~~--~~~~v~~~ 233 (313)
.++..+|.+.+. ..+++++|+||++||++|+.+.+.+ ..++..+.. .+.++.+|++.. .. ..|++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 10 AFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEGVELRKKYGVHAY 87 (130)
T ss_dssp CCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTHHHHHHHTTCCSS
T ss_pred CcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcchHHHHHHcCCCCC
Confidence 357788888773 3578999999999999999999998 777776654 588899999852 22 68999999
Q ss_pred ceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCCCC
Q 021368 234 PTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 271 (313)
Q Consensus 234 P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 271 (313)
|++++| ++|+.+. .+.|..+.+.|.+||++.+...
T Consensus 88 Pt~~~~d~~G~~~~---~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 88 PTLLFINSSGEVVY---RLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp CEEEEECTTSCEEE---EEESCCCHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCcEEE---EecCCCCHHHHHHHHHHHHHhc
Confidence 999999 5676653 7889889999999999986543
No 140
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.49 E-value=8.9e-13 Score=112.43 Aligned_cols=209 Identities=15% Similarity=0.135 Sum_probs=155.2
Q ss_pred CCCceEEeC-CCcccccccCCCccEEEEEeeCCchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 30 KLPLVTIFT-RENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 30 ~~~~v~~lt-~~~~~~~~~~~~~~~v~f~~~~~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
.-|.+.+|+ .+.++.++.....++|.||.++ |......|.++|..+.+.+.|+.+. +..+++++++. .
T Consensus 4 ~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~--~~~~~~~f~~~A~~lr~~~~F~~~~------~~~v~~~~~~~-~-- 72 (252)
T 2h8l_A 4 GSPASVPLRTEEEFKKFISDKDASIVGFFDDS--FSEAHSEFLKAASNLRDNYRFAHTN------VESLVNEYDDN-G-- 72 (252)
T ss_dssp --CCEEECCSHHHHHHHHTSSSCEEEEEESCT--TSHHHHHHHHHHHHTTTTSCEEEEC------CHHHHHHHCSS-S--
T ss_pred CCCCceeecCHHHHHHHhhcCCeEEEEEECCC--CChHHHHHHHHHHhcccCcEEEEEC------hHHHHHHhCCC-C--
Confidence 457788885 4556666766666778888874 7778899999999998889998874 23789999997 3
Q ss_pred cEEEEEcCC------CCceecc-CCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcE
Q 021368 109 KVLAYTGND------DAKKHIL-DGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDV 181 (313)
Q Consensus 109 P~i~~~~~~------~~~~~~~-~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~ 181 (313)
|++++|+.+ ...+..| .|.++.+.|.+||....- +.|..++.+++..+ .+.++
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~-----------------Plv~e~t~~n~~~~---~~~~~ 132 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIF-----------------GICPHMTEDNKDLI---QGKDL 132 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSS-----------------CSSCEECTTTHHHH---SSSSE
T ss_pred CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhccc-----------------CCeeecccccHhhh---cCCCe
Confidence 888888753 1345678 899999999999999743 46789999999885 34567
Q ss_pred EEEEeCCCCccc----hhhhHHHHHHHHHhcCC-CcEEEEEEeCCCccc--ccCCC----CcCceEEEEeCCCCCcCcee
Q 021368 182 LLEIYAPWCGHC----QAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKS----DGFPTILFFPAGNKSFDPIN 250 (313)
Q Consensus 182 lv~fy~~~C~~C----~~~~~~~~~la~~~~~~-~~v~~~~vd~~~~~~--~~~~v----~~~P~i~~~~~g~~~~~~~~ 250 (313)
+|.|+...+..+ ..+...+.++|+.+++. ..+.|+.+|+..... ..|++ ..+|+++++..... ...
T Consensus 133 ~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~---ky~ 209 (252)
T 2h8l_A 133 LIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGE---KFV 209 (252)
T ss_dssp EEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSC---EEE
T ss_pred EEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCc---Eec
Confidence 777775543222 24778888999999862 349999999987764 67788 36899999854322 124
Q ss_pred eccCcCHHH--HHHHHHhcCCCCc
Q 021368 251 VDVDRTVVA--LYKFLKKNASIPF 272 (313)
Q Consensus 251 y~g~~~~~~--l~~fi~~~~~~~~ 272 (313)
+.+..+.+. |.+|+++.+.-++
T Consensus 210 ~~~~~t~~~~~i~~F~~~~~~Gkl 233 (252)
T 2h8l_A 210 MQEEFSRDGKALERFLQDYFDGNL 233 (252)
T ss_dssp CCSCCCTTSHHHHHHHHHHHHTCS
T ss_pred CCcccCcchHHHHHHHHHHHCCCc
Confidence 566777778 9999999886554
No 141
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.49 E-value=6.4e-15 Score=112.38 Aligned_cols=105 Identities=24% Similarity=0.424 Sum_probs=88.1
Q ss_pred CCCeEEE-cCcChHHHhhc---CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCc
Q 021368 159 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG 232 (313)
Q Consensus 159 ~~~v~~l-~~~~f~~~l~~---~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~ 232 (313)
.+.+..+ +.++|.+.+.. .+++++|+||++||++|+.+.+.|.+++..+. ++.++.+|++.+.. .+|++.+
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHHHTCCS
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHHcCCCc
Confidence 3456667 45889988864 57899999999999999999999999999885 48899999988765 7899999
Q ss_pred CceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 233 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 233 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
+|++++|++|+.+. .+.| .+.+.|.++|.+.+..
T Consensus 90 ~Pt~~~~~~g~~~~---~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 90 MPTFLFIKDGAEAD---KVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp SCCCCBCTTTTCCB---CCCT-TCTTTHHHHHHHHTSS
T ss_pred cceEEEEeCCeEEE---EEeC-CCHHHHHHHHHHHHhc
Confidence 99999998887764 6777 5778899999998753
No 142
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.49 E-value=5.8e-14 Score=102.32 Aligned_cols=102 Identities=16% Similarity=0.205 Sum_probs=90.1
Q ss_pred eEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEE
Q 021368 34 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 112 (313)
Q Consensus 34 v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~ 112 (313)
|.+++.++|++.+..+..++|+||++| ++|+.+.|.|.+++..+.+ +.|+.+|++. ++.++++|+|.++ |+++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~---~~~~~~~~~v~~~--Pt~~ 74 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDE---NPDIAARYGVMSL--PTVI 74 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCSS--CEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCC---CHHHHHhCCcccc--CEEE
Confidence 467899999998877778899999999 9999999999999999999 9999999998 6699999999998 9999
Q ss_pred EEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 113 YTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
++.+|. ....+.|..+.+.|.+|+.+.++
T Consensus 75 ~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 75 FFKDGE-PVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEECCe-EhhhccCCCCHHHHHHHHHHHhc
Confidence 886553 34457899999999999998864
No 143
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.49 E-value=4.3e-14 Score=107.01 Aligned_cols=104 Identities=19% Similarity=0.288 Sum_probs=83.6
Q ss_pred CceEEeCCCcccc-cccCCCccEEEEEeeC-C--------------chhhhhHHHHHHHHhccCeEEEEEEeCCCccccc
Q 021368 32 PLVTIFTRENAPS-VFESPIKNQLLLFAVS-N--------------DSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGK 95 (313)
Q Consensus 32 ~~v~~lt~~~~~~-~~~~~~~~~v~f~~~~-~--------------~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~ 95 (313)
+.|..++.++|+. +...+.+++|.||++| + +|+.+.|.|.+++.++.+.+.|+.||++. ++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~---~~ 79 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQ---NP 79 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTS---CT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCC---CH
Confidence 4578899999985 4466778888999999 9 99999999999999999889999999998 66
Q ss_pred chhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 96 PVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 96 ~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
.++++|||.++ |+++++.+|. ....+.|..+.+.|.+|+.+.+
T Consensus 80 ~l~~~~~v~~~--Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 GTAPKYGIRGI--PTLLLFKNGE-VAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TTGGGGTCCBS--SEEEEEESSS-EEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHHcCCCcc--CEEEEEECCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999 9999886554 3445789999999999998764
No 144
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.49 E-value=1.4e-14 Score=110.79 Aligned_cols=104 Identities=10% Similarity=0.094 Sum_probs=92.7
Q ss_pred ceEEeCCCcccccccCCCccEEEEEeeC---CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 33 LVTIFTRENAPSVFESPIKNQLLLFAVS---NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 33 ~v~~lt~~~~~~~~~~~~~~~v~f~~~~---~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
.+..+|.++|++.+....+++|.|+++| ++|+.+.|+++++|.+|.++ +.|++||.++ ++.++.+|||++.
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe---~~~lA~~ygV~sI-- 92 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ---SEAIGDRFGAFRF-- 92 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH---HHHHHHHHTCCSS--
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC---CHHHHHHcCCccC--
Confidence 5679999999998776667888899987 89999999999999999999 9999999998 7799999999999
Q ss_pred cEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 109 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
||+++|++|+. .-...|..+.+.|.+++.+++.
T Consensus 93 PTlilFk~G~~-v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 93 PATLVFTGGNY-RGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp SEEEEEETTEE-EEEEESCCCHHHHHHHHHHHHC
T ss_pred CEEEEEECCEE-EEEEecCCCHHHHHHHHHHHhc
Confidence 99999998863 3456789999999999999885
No 145
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.49 E-value=1.6e-13 Score=105.32 Aligned_cols=105 Identities=11% Similarity=0.129 Sum_probs=89.4
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCc--Cce
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG--FPT 235 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~--~P~ 235 (313)
+.|..++.++|.+.+ ..+.+++|+||++ |++|+.+.+.+.++|..+++ .+.|+.+|.+.+.. ..|++.+ +|+
T Consensus 6 plv~~~t~~~f~~~~-~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g--k~~f~~vd~d~~~~~a~~~gi~~~~iPt 81 (133)
T 2djk_A 6 PLIGEIGPETYSDYM-SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG--VINFGTIDAKAFGAHAGNLNLKTDKFPA 81 (133)
T ss_dssp CCSEECCHHHHHHHH-HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT--TSEEEEECTTTTGGGTTTTTCCSSSSSE
T ss_pred CceeccChHHHHHHh-cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC--eEEEEEEchHHhHHHHHHcCCCcccCCE
Confidence 347789999999875 6778999999999 89999999999999999987 69999999998875 7899999 999
Q ss_pred EEEEeC--CCCCcCceeec--cCcCHHHHHHHHHhcCCCCc
Q 021368 236 ILFFPA--GNKSFDPINVD--VDRTVVALYKFLKKNASIPF 272 (313)
Q Consensus 236 i~~~~~--g~~~~~~~~y~--g~~~~~~l~~fi~~~~~~~~ 272 (313)
+++|++ |... .+. |..+.+.|.+||++.+.-++
T Consensus 82 l~i~~~~~g~~~----~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 82 FAIQEVAKNQKF----PFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp EEEECTTTCCBC----CCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred EEEEecCcCccc----CCCCccccCHHHHHHHHHHHHcCCc
Confidence 999987 4442 444 88999999999999875433
No 146
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.49 E-value=5.7e-14 Score=110.80 Aligned_cols=106 Identities=12% Similarity=0.099 Sum_probs=93.2
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
...+.+++..+|+..+..+..++|.||++| ++|+.+.|.|++++.++.+.+.|+.||+++ ++.++++|||+++ |
T Consensus 46 ~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~---~~~l~~~~~i~~~--P 120 (155)
T 2ppt_A 46 TGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA---HPAVAGRHRIQGI--P 120 (155)
T ss_dssp CSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT---STHHHHHTTCCSS--S
T ss_pred CCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc---cHHHHHHcCCCcC--C
Confidence 345788999999988777778899999999 999999999999999999889999999998 6699999999999 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+++++.+|. ....+.|..+.+.|.+|+.+.++
T Consensus 121 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 121 AFILFHKGR-ELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp EEEEEETTE-EEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEEEEeCCe-EEEEecCCCCHHHHHHHHHHHhc
Confidence 999987654 34457899999999999999876
No 147
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.49 E-value=1.2e-13 Score=102.49 Aligned_cols=107 Identities=14% Similarity=0.169 Sum_probs=91.4
Q ss_pred CCCceEEeCCCccccc-ccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 30 KLPLVTIFTRENAPSV-FESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~-~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
+...+..++.++|... ...+..++|.||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|||.++
T Consensus 3 m~~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~- 78 (112)
T 1t00_A 3 MAGTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDE---NPGTAAKYGVMSI- 78 (112)
T ss_dssp SSCCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSS-
T ss_pred ccceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCC---CHHHHHhCCCCcc-
Confidence 3456789999999764 455667888999999 999999999999999998889999999998 6699999999998
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+++++.+|. ....+.|..+.+.|.+++.+.++
T Consensus 79 -Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 79 -PTLNVYQGGE-VAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp -SEEEEEETTE-EEEEEESCCCHHHHHHHTHHHHC
T ss_pred -cEEEEEeCCE-EEEEEeCCCCHHHHHHHHHHHhh
Confidence 9998887654 34557899999999999998864
No 148
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.48 E-value=7.8e-14 Score=102.33 Aligned_cols=97 Identities=8% Similarity=0.050 Sum_probs=74.2
Q ss_pred CCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcC
Q 021368 38 TRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGN 116 (313)
Q Consensus 38 t~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~ 116 (313)
+.++|++.+..+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||++. ++.++++|+|.++ |+++++++
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~~~~ 80 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNY-VEKIEILLQD---MQEIAGRYAVFTG--PTVLLFYN 80 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTT-EEEEEEEECC---C---------CCC--CEEEEEET
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCC-ceEEEEECCC---CHHHHHhcCCCCC--CEEEEEeC
Confidence 56778888878888899999999 9999999999999999965 9999999998 6699999999998 99999976
Q ss_pred CCCceeccCCCCCHHHHHHHHHHHh
Q 021368 117 DDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 117 ~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|. ....+.|..+.+.|.+++.+++
T Consensus 81 G~-~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 81 GK-EILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp TE-EEEEEESSCCHHHHHHHHHTTC
T ss_pred Ce-EEEEEeCCcCHHHHHHHHHHhh
Confidence 54 3455688999999999998764
No 149
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.48 E-value=5.2e-14 Score=108.90 Aligned_cols=107 Identities=7% Similarity=0.038 Sum_probs=87.9
Q ss_pred eEEeCC-Ccccccc--cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 34 VTIFTR-ENAPSVF--ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 34 v~~lt~-~~~~~~~--~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
+..++. ++|++.+ ....+++|.||++| ++|+.+.|.|+++|.++.+++.|+.||.++ +++++..|+|.+. |
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe---~~e~a~~y~V~si--P 97 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE---VPDFNTMYELYDP--V 97 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT---CCTTTTTTTCCSS--E
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC---CHHHHHHcCCCCC--C
Confidence 555655 6787655 35667888899999 999999999999999999989999999998 7799999999988 9
Q ss_pred EEEEEcCCCCce-e-------ccCCCCC-HHHHHHHHHHHhcCCC
Q 021368 110 VLAYTGNDDAKK-H-------ILDGELT-LDKIKTFGEDFLEGKL 145 (313)
Q Consensus 110 ~i~~~~~~~~~~-~-------~~~g~~~-~~~i~~fi~~~~~~~~ 145 (313)
|+++|.+|+... - +..|..+ .+.|.++|+.++.|..
T Consensus 98 T~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~ 142 (160)
T 2av4_A 98 SVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGAR 142 (160)
T ss_dssp EEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhh
Confidence 999888775321 1 5678776 9999999998876543
No 150
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.48 E-value=1.3e-13 Score=101.84 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=89.5
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhcc---CeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK---GKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~---~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
.+.+..++.++|++.+. +..++|+||++| ++|+.+.|.|.+++.++. +.+.|+.||++. ++.++++|+|.++
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~~ 79 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA---ERNICSKYSVRGY 79 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT---CHHHHHHTTCCSS
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc---cHhHHHhcCCCcc
Confidence 35688999999999887 558889999999 999999999999999986 359999999998 6699999999999
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
|+++++.+|. ....+.|..+.+.|.+|+.+.
T Consensus 80 --Pt~~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 --PTLLLFRGGK-KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp --SEEEEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred --cEEEEEeCCc-EEEeccCCcCHHHHHHHHHhc
Confidence 9999997664 345678999999999999874
No 151
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.47 E-value=2.2e-13 Score=95.60 Aligned_cols=81 Identities=21% Similarity=0.275 Sum_probs=70.5
Q ss_pred CcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcC
Q 021368 179 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRT 256 (313)
Q Consensus 179 k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~ 256 (313)
.+.+++||++||++|+.+.+.+.+++..+.+ ++.+..+|++.+.. .++++.++|++++ +|+. .+.|..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----~~~G~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-----EFIGAPT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-----ECCSSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-----eeecCCC
Confidence 4689999999999999999999999999875 69999999988765 7899999999999 5542 6888888
Q ss_pred HHHHHHHHHhcC
Q 021368 257 VVALYKFLKKNA 268 (313)
Q Consensus 257 ~~~l~~fi~~~~ 268 (313)
.+.|.+||++.+
T Consensus 74 ~~~l~~~l~~~l 85 (85)
T 1fo5_A 74 KEALVEAIKKRL 85 (85)
T ss_dssp SHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 899999998763
No 152
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.47 E-value=1.3e-13 Score=106.60 Aligned_cols=107 Identities=19% Similarity=0.225 Sum_probs=78.9
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
.+.+.+++.++|...+.....++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|+|.++ |
T Consensus 32 ~~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--P 106 (140)
T 1v98_A 32 LPWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDE---HPGLAARYGVRSV--P 106 (140)
T ss_dssp -----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT---CHHHHHHTTCCSS--S
T ss_pred CCccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCC---CHHHHHHCCCCcc--C
Confidence 367888999999987655555788899999 999999999999999999789999999998 6699999999998 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
+++++.+|. ....+.|..+.+.|.+|+.+++.+
T Consensus 107 t~~~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 107 TLVLFRRGA-PVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEEEEETTE-EEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEEEEeCCc-EEEEEeCCCCHHHHHHHHHHHHcc
Confidence 999887654 344578999999999999998865
No 153
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.47 E-value=1.1e-13 Score=106.55 Aligned_cols=107 Identities=15% Similarity=0.238 Sum_probs=90.3
Q ss_pred CCceEEeCCCccccccc------------CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccch
Q 021368 31 LPLVTIFTRENAPSVFE------------SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPV 97 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~------------~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l 97 (313)
...+..++.++|.+.+. .+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. +..+
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~---~~~l 84 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEK---EQEL 84 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCC---CHHH
Confidence 34678888888887554 3567888999999 999999999999999999889999999998 6699
Q ss_pred hhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 98 SEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 98 ~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
+++|+|.++ |++++++.++. ...+.|..+.+.|.+|+.+.+..
T Consensus 85 ~~~~~v~~~--Pt~~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 85 AGAFGIRSI--PSILFIPMEGK-PEMAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HHHTTCCSS--CEEEEECSSSC-CEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHcCCCCC--CEEEEECCCCc-EEEEeCCCCHHHHHHHHHHHhhc
Confidence 999999999 99999943322 23578999999999999999764
No 154
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.46 E-value=8.2e-14 Score=105.44 Aligned_cols=99 Identities=18% Similarity=0.299 Sum_probs=80.4
Q ss_pred eEEEcCcChHHHhhc-CCCcEEEEEeCC-------CCccchhhhHHHHHHHHHhcCCCcEEEEEEeC-------CCccc-
Q 021368 162 VKIVVGNNFDEIVLD-ESKDVLLEIYAP-------WCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG-------TTNEH- 225 (313)
Q Consensus 162 v~~l~~~~f~~~l~~-~~k~~lv~fy~~-------~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~-------~~~~~- 225 (313)
+...+.++|.+.+.+ .+++++|+||++ ||++|+.+.|.+.+++..+.+ ++.|+.+|+ +.+..
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCchhhhchhHHH
Confidence 556778899998865 579999999999 999999999999999998865 699999999 44443
Q ss_pred -ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHh
Q 021368 226 -HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 266 (313)
Q Consensus 226 -~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~ 266 (313)
.++++.++|++++|.++... ..+.| .+.+.|.+||.+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~---~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKL---VESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEE---EGGGG-GCHHHHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCceE---ecccc-CCHHHHHHHHhc
Confidence 67999999999999875432 23444 577889999864
No 155
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.46 E-value=1.1e-13 Score=104.04 Aligned_cols=106 Identities=14% Similarity=0.147 Sum_probs=90.8
Q ss_pred CCCceEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 30 KLPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
.-+.+..++.++|++.+ ..+...+|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|+|.++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~---~~~l~~~~~v~~~- 86 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD---HTDLAIEYEVSAV- 86 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTT---THHHHHHTTCCSS-
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCC---CHHHHHHcCCCcc-
Confidence 34578889999998744 55667888899999 999999999999999998889999999998 6699999999999
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|+++++.+|. ....+.|..+.+.|.+|+.+.+
T Consensus 87 -Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 87 -PTVLAMKNGD-VVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp -SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred -cEEEEEeCCc-EEEEEcCCCCHHHHHHHHHHHh
Confidence 9998986553 3445788899999999999876
No 156
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.46 E-value=4.5e-14 Score=106.44 Aligned_cols=105 Identities=18% Similarity=0.108 Sum_probs=89.3
Q ss_pred CceEEeCCCcccc-cccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 32 PLVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 32 ~~v~~lt~~~~~~-~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
+.+..++.++|.. +...+..++|.||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|+|.++ |
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~--P 77 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA---YPQTCQKAGIKAY--P 77 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT---CHHHHHHTTCCSS--S
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcC---CHHHHHHcCCCcc--c
Confidence 4578899999954 6667778889999999 999999999999999999889999999998 6699999999998 9
Q ss_pred EEEEEcCCCCceeccCCC----CCHHHHHHHHHHHhc
Q 021368 110 VLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLE 142 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~ 142 (313)
++++++.+.. ...+.|. ++.+.|.+|+.+.+.
T Consensus 78 t~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 78 SVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred eEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHH
Confidence 9999976543 3334443 899999999999876
No 157
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.46 E-value=7.7e-14 Score=107.21 Aligned_cols=101 Identities=25% Similarity=0.472 Sum_probs=80.2
Q ss_pred EcCcChHHHhhc-CCCcEEEEEeCCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCCccc------ccCCCCcCc
Q 021368 165 VVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSDGFP 234 (313)
Q Consensus 165 l~~~~f~~~l~~-~~k~~lv~fy~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~~~~------~~~~v~~~P 234 (313)
.+.+++...+.+ .+++++|+||++||++|+.+.+.+ .+++..+. ++.++.+|++.+.. ..|++.++|
T Consensus 17 ~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~~~~~~~l~~~~~v~~~P 93 (134)
T 2fwh_A 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTANDAQDVALLKHLNVLGLP 93 (134)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTCCHHHHHHHHHTTCCSSS
T ss_pred cCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCCcchHHHHHHHcCCCCCC
Confidence 344667766643 378999999999999999999998 88988886 38999999965421 689999999
Q ss_pred eEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 235 TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 235 ~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++++| ++|+.+ ...++.|..+.+.|.++|.+..+
T Consensus 94 t~~~~d~~G~~v-~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 94 TILFFDGQGQEH-PQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp EEEEECTTSCBC-GGGCBCSCCCHHHHHHHHHHC--
T ss_pred EEEEECCCCCEe-eeeeeeeccCHHHHHHHHHhcCc
Confidence 99999 677764 11378999999999999987743
No 158
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.46 E-value=1.8e-13 Score=100.56 Aligned_cols=102 Identities=21% Similarity=0.249 Sum_probs=88.0
Q ss_pred eEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEE
Q 021368 34 VTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 34 v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i 111 (313)
+..++.++|+..+ ..+..++|.||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|||.++ |++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~ 77 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE---SPNVASEYGIRSI--PTI 77 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHHTCCSS--CEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCC---CHHHHHHCCCCcC--CEE
Confidence 5678888888754 55667888899999 999999999999999999889999999998 6699999999998 999
Q ss_pred EEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 112 AYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
+++.+|. ....+.|..+.+.+.+++.+++
T Consensus 78 ~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 78 MVFKGGK-KCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EEESSSS-EEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEeCCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 8886554 3455789999999999999875
No 159
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.46 E-value=7.7e-14 Score=104.44 Aligned_cols=103 Identities=13% Similarity=0.200 Sum_probs=87.7
Q ss_pred CCceEEeCCCccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 31 LPLVTIFTRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
.+.....+.++|++.+. .+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++ ++.++++|||.++
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~---~~~l~~~~~v~~~- 85 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDD---CQDVASECEVKSM- 85 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTT---THHHHHHTTCCSS-
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC---CHHHHHHcCCccc-
Confidence 34556677888888877 7778899999999 9999999999999999999 9999999998 6799999999999
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|+++++.+|. ....+.|. +.+.|.+++.+++
T Consensus 86 -Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 86 -PTFQFFKKGQ-KVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp -SEEEEESSSS-EEEEEESC-CHHHHHHHHHHHC
T ss_pred -cEEEEEeCCe-EEEEEcCC-CHHHHHHHHHHhC
Confidence 9999996654 34456787 9999999998763
No 160
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.45 E-value=1.3e-13 Score=103.68 Aligned_cols=109 Identities=13% Similarity=0.091 Sum_probs=90.9
Q ss_pred hcCCCceEEeCCCccccc-ccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCC
Q 021368 28 SNKLPLVTIFTRENAPSV-FESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 28 ~~~~~~v~~lt~~~~~~~-~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
......+..++.++|... ...+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|+|.+
T Consensus 8 ~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~i~~ 84 (121)
T 2i1u_A 8 DSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT---NPETARNFQVVS 84 (121)
T ss_dssp ----CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCS
T ss_pred hhhcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC---CHHHHHhcCCCc
Confidence 344557889999999864 456678888999999 999999999999999998889999999998 669999999999
Q ss_pred CCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 106 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+ |+++++.+|. ....+.|..+.+.|.+|+.+.++
T Consensus 85 ~--Pt~~~~~~g~-~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 85 I--PTLILFKDGQ-PVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp S--SEEEEEETTE-EEEEEESCCCHHHHHHHTCSCCC
T ss_pred C--CEEEEEECCE-EEEEecCCCCHHHHHHHHHHHHh
Confidence 9 9999887554 34457899999999999988764
No 161
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.45 E-value=2.3e-13 Score=99.47 Aligned_cols=102 Identities=18% Similarity=0.272 Sum_probs=87.4
Q ss_pred eEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEE
Q 021368 34 VTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 34 v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i 111 (313)
|..++.++|+..+ ..+.+++++||++| ++|+.+.|.|.+++.++.+.+.|+.+|++. ++.++++|+|.++ |++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDE---APGIATQYNIRSI--PTV 76 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSS--SEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcc---hHHHHHhCCCCcc--cEE
Confidence 5678999998854 45667888899999 999999999999999999889999999998 6699999999998 999
Q ss_pred EEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 112 AYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
+++.+|. ....+.|..+.+.+.+++.+++
T Consensus 77 ~~~~~g~-~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 77 LFFKNGE-RKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEEETTE-EEEEEEECCCHHHHHHHHHHHC
T ss_pred EEEeCCe-EEEEEecCCCHHHHHHHHHhhC
Confidence 8887554 3445678899999999998763
No 162
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.45 E-value=1.3e-13 Score=108.39 Aligned_cols=128 Identities=16% Similarity=0.126 Sum_probs=92.3
Q ss_pred CCCceEEeC-CCcccccccC--CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCC
Q 021368 30 KLPLVTIFT-RENAPSVFES--PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 30 ~~~~v~~lt-~~~~~~~~~~--~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
....+..++ .++|+.++.. +..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++ ++.++++|||.+
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~~~---~~~l~~~~~v~~ 85 (153)
T 2wz9_A 10 AVAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQ-VSFVKLEAEG---VPEVSEKYEISS 85 (153)
T ss_dssp --CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---SHHHHHHTTCCS
T ss_pred ccCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCC-eEEEEEECCC---CHHHHHHcCCCC
Confidence 345567776 4788887766 778899999999 9999999999999999865 9999999998 669999999999
Q ss_pred CCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhh
Q 021368 106 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVL 175 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~ 175 (313)
+ |+++++++|. ....+.| .+.+.|.+|+.+.++.... .....+..++..+|+....
T Consensus 86 ~--Pt~~~~~~G~-~~~~~~G-~~~~~l~~~i~~~l~~~~~----------~~~~~~~~l~~~~f~~~~~ 141 (153)
T 2wz9_A 86 V--PTFLFFKNSQ-KIDRLDG-AHAPELTKKVQRHASSGSF----------LPSAKVKVDTDPNSSSVDK 141 (153)
T ss_dssp S--SEEEEEETTE-EEEEEES-SCHHHHHHHHHHHSCTTSS----------CSCCCCCCC----------
T ss_pred C--CEEEEEECCE-EEEEEeC-CCHHHHHHHHHHHhccccC----------CCccccccCCCCChhhHHH
Confidence 9 9999998553 3334556 5788999999999864322 1234566678888887653
No 163
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.45 E-value=1.2e-13 Score=105.85 Aligned_cols=87 Identities=22% Similarity=0.427 Sum_probs=73.8
Q ss_pred cCCCcEEEEEeCCCCccchhhhHHHH--HHHHHhcCCCcEEEEEEeC---CCccc--ccCCC---CcCceEEEE-eCCCC
Q 021368 176 DESKDVLLEIYAPWCGHCQAFEPTYN--KLAKHLRGVDSIVIAKMDG---TTNEH--HRAKS---DGFPTILFF-PAGNK 244 (313)
Q Consensus 176 ~~~k~~lv~fy~~~C~~C~~~~~~~~--~la~~~~~~~~v~~~~vd~---~~~~~--~~~~v---~~~P~i~~~-~~g~~ 244 (313)
..+++++|+||++||++|+.+.+.|. +++..+.. ++.++.+|+ +.+.. .+|++ .++|++++| ++|+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 45899999999999999999999999 99998865 699999999 55543 78999 999999999 67776
Q ss_pred CcCceeecc-------CcCHHHHHHHHHhc
Q 021368 245 SFDPINVDV-------DRTVVALYKFLKKN 267 (313)
Q Consensus 245 ~~~~~~y~g-------~~~~~~l~~fi~~~ 267 (313)
+. .+.| ..+.+.|.+||++.
T Consensus 105 ~~---~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 105 RY---TTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EE---ECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EE---EecCCcccccccCCHHHHHHHHHHh
Confidence 54 5666 57889999999764
No 164
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.44 E-value=2.9e-13 Score=95.01 Aligned_cols=80 Identities=14% Similarity=0.151 Sum_probs=70.0
Q ss_pred cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCH
Q 021368 180 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTV 257 (313)
Q Consensus 180 ~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~ 257 (313)
..+++||++||++|+.+.+.+.+++..+.+ ++.+..+|++.+.. .++++.++|++++ +|+. ++.|..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----~~~G~~~~ 73 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-----RFVGAPSR 73 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-----EEECSSCC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-----EEccCCCH
Confidence 468999999999999999999999999976 68999999998765 7899999999998 5543 68888888
Q ss_pred HHHHHHHHhcC
Q 021368 258 VALYKFLKKNA 268 (313)
Q Consensus 258 ~~l~~fi~~~~ 268 (313)
+.|.++|.+.+
T Consensus 74 ~~l~~~l~~~l 84 (85)
T 1nho_A 74 EELFEAINDEM 84 (85)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 165
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.44 E-value=3.2e-13 Score=117.32 Aligned_cols=107 Identities=15% Similarity=0.277 Sum_probs=94.0
Q ss_pred CCCceEEeCCCcccccccC--CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 30 KLPLVTIFTRENAPSVFES--PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~~~--~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
..+.|..+|.++|+.++.. +.+++|.||++| ++|+.+.|.|.+++.++.+++.|+.|||+. ++.++++|||.++
T Consensus 5 ~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~ 81 (287)
T 3qou_A 5 SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA---EQMIAAQFGLRAI 81 (287)
T ss_dssp -CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTT---CHHHHHTTTCCSS
T ss_pred CCCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCcc---CHHHHHHcCCCCC
Confidence 3568999999999998754 678888999999 999999999999999999999999999998 6799999999999
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+++++.+|. ....+.|..+.+.+.+|+...++
T Consensus 82 --Pt~~~~~~G~-~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 82 --PTVYLFQNGQ-PVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp --SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHSC
T ss_pred --CeEEEEECCE-EEEEeeCCCCHHHHHHHHHHHcC
Confidence 9999997654 33457899999999999999864
No 166
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.44 E-value=1.6e-13 Score=110.07 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=78.3
Q ss_pred EEcCcChHHHhh---cCCCcEEEEEeCCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCCcc-------------
Q 021368 164 IVVGNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE------------- 224 (313)
Q Consensus 164 ~l~~~~f~~~l~---~~~k~~lv~fy~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~~~------------- 224 (313)
.++..+|.+.+. ..+++++|+||++||++|+.+.+.+ ..+...++. ++.++.+|++...
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcch
Confidence 355677777663 5689999999999999999984444 555555554 6899999998765
Q ss_pred ---------------cccCCCCcCceEEEE-eCCCCCcCceeeccCcC-HHHHHHHHHhcC
Q 021368 225 ---------------HHRAKSDGFPTILFF-PAGNKSFDPINVDVDRT-VVALYKFLKKNA 268 (313)
Q Consensus 225 ---------------~~~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~-~~~l~~fi~~~~ 268 (313)
...|++.++|+++++ ++|+.+. .+.|..+ .+.|.+||.+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~---~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLN---KSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSS---CCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEe---eccCCCCCHHHHHHHHHHHH
Confidence 346889999999999 6777764 6778777 999999998864
No 167
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.43 E-value=2.7e-13 Score=112.38 Aligned_cols=110 Identities=14% Similarity=0.176 Sum_probs=96.9
Q ss_pred CCCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 30 KLPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
..+.+..++.++|+..+..+..++|.||++| ++|+.+.|.|.+++.++.+.+.|+.|||+. ++.+|++|||.++
T Consensus 95 ~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~-- 169 (210)
T 3apq_A 95 DDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGD---DRMLCRMKGVNSY-- 169 (210)
T ss_dssp TCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT---CHHHHHHTTCCSS--
T ss_pred CCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCc---cHHHHHHcCCCcC--
Confidence 3456889999999988877888999999999 999999999999999999889999999998 6699999999999
Q ss_pred cEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCC
Q 021368 109 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
|+++++..|. ....+.|.++.+.|.+|+.+.+...+
T Consensus 170 Pt~~~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 170 PSLFIFRSGM-AAVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp SEEEEECTTS-CCEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred CeEEEEECCC-ceeEecCCCCHHHHHHHHHHhCcccc
Confidence 9999996654 35568899999999999999987443
No 168
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.43 E-value=4.4e-13 Score=112.82 Aligned_cols=106 Identities=11% Similarity=0.058 Sum_probs=90.5
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEe--eCCchhhhhHHHHHHHHhccC--eEEEEEEeCCC--cccccchhhhhCCC
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFA--VSNDSEKLLPVFEEAAKSFKG--KLIFVYVQMDN--EDVGKPVSEYFGIT 104 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~--~~~~c~~~~~~~~~~a~~~~~--~v~f~~vd~~~--~~~~~~l~~~~~v~ 104 (313)
...|..|++.+|+.++.....++|.||+ +| |. +.|.|.++|..+.+ .+.|+.|||++ +..++.+|++|+|+
T Consensus 4 ~~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pW--Cg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~ 80 (240)
T 2qc7_A 4 TKGALPLDTVTFYKVIPKSKFVLVKFDTQYPY--GE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLD 80 (240)
T ss_dssp CTTCEECCTTHHHHHGGGCSEEEEEECCSSCC--SH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCC
T ss_pred CCCceECCHHHHHHHHcCCCCEEEEEeCCCCC--Cc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCC
Confidence 4568899999999988877788999999 87 43 99999999999963 69999999654 22377999999999
Q ss_pred --CCCCcEEEEEcCCC-CceeccCCCCCHHHHHHHHHHHh
Q 021368 105 --GEAPKVLAYTGNDD-AKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 105 --~~~~P~i~~~~~~~-~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
++ ||+++|..|. .....|.|.++.+.|.+|+.+..
T Consensus 81 ~~~~--PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 81 KESY--PVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGGC--SEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCC--CEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 89 9999998876 34668899999999999999874
No 169
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.43 E-value=4.7e-13 Score=111.94 Aligned_cols=110 Identities=19% Similarity=0.279 Sum_probs=96.1
Q ss_pred CCCceEEeCCCcccc-cccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 30 KLPLVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~-~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
..+.+..+|.++|+. +...+..++|.||++| ++|+.+.|.|.+++.++.+.+.|+.|||+. ++.++++|+|.++
T Consensus 10 ~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~---~~~l~~~~~v~~~- 85 (222)
T 3dxb_A 10 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ---NPGTAPKYGIRGI- 85 (222)
T ss_dssp CSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CTTTGGGGTCCSB-
T ss_pred CCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC---CHHHHHHcCCCcC-
Confidence 356788999999998 5667778889999999 999999999999999999989999999998 6699999999999
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCC
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
|+++++++|. ....+.|..+.+.|.+|+.+.+.+..
T Consensus 86 -Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 86 -PTLLLFKNGE-VAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp -SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred -CEEEEEECCe-EEEEeccccChHHHHHHHHhhccccc
Confidence 9999997654 34467899999999999999987543
No 170
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.42 E-value=9e-13 Score=97.53 Aligned_cols=104 Identities=16% Similarity=0.208 Sum_probs=87.3
Q ss_pred CCceEEeCCCccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 31 LPLVTIFTRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
.+.+..++.++|...+. .+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++. ++.++++|||.++
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~--~~~~~~~~~v~~~- 79 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQE--NKTLAKELGIRVV- 79 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST--THHHHHHHCCSBS-
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcc--hHHHHHHcCCCee-
Confidence 45788999999998776 4667888999999 9999999999999999987 99999999832 5699999999999
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|+++++.+|. ....+.|. ..+.|.+++.+++
T Consensus 80 -Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 80 -PTFKILKENS-VVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp -SEEEEESSSS-EEEEEESS-CHHHHHHHHHHHH
T ss_pred -eEEEEEeCCc-EEEEEcCC-CHHHHHHHHHHhh
Confidence 9988887664 33345675 4899999998875
No 171
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.42 E-value=7.3e-13 Score=100.40 Aligned_cols=105 Identities=9% Similarity=0.071 Sum_probs=88.1
Q ss_pred ceEEeCCCccc-----ccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEe--CCCcccccchhhhhCCC
Q 021368 33 LVTIFTRENAP-----SVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQ--MDNEDVGKPVSEYFGIT 104 (313)
Q Consensus 33 ~v~~lt~~~~~-----~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd--~~~~~~~~~l~~~~~v~ 104 (313)
.+..++..+++ .....+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.|| ++. +..++++|||.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~---~~~~~~~~~v~ 81 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEK---NIDLAYKYDAN 81 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSH---HHHHHHHTTCC
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCc---hHHHHHHcCCc
Confidence 34566667766 45566778889999999 999999999999999998779999999 776 66999999999
Q ss_pred CCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 105 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 105 ~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
++ |++++++.++.....+.|..+.+.|.+++.+.+.
T Consensus 82 ~~--Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 117 (126)
T 2l57_A 82 IV--PTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGV 117 (126)
T ss_dssp SS--SEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCC
T ss_pred ce--eEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhc
Confidence 98 9999998444344567899999999999999865
No 172
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.42 E-value=3.9e-13 Score=98.38 Aligned_cols=100 Identities=14% Similarity=0.182 Sum_probs=85.0
Q ss_pred eEEeCC-Cccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 34 VTIFTR-ENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 34 v~~lt~-~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
+.++++ ++|+..+. .+..++++||++| ++|+.+.|.|.+++.++++.+.|+.||+++ ++.++++|||.++ |
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--P 76 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDE---CEDIAMEYNISSM--P 76 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT---CHHHHHHTTCCSS--S
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccc---hHHHHHHcCCCcc--c
Confidence 567777 78887776 6778888999999 999999999999999997779999999998 6699999999999 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
+++++.+|. ....+.| .+.+.|.+|+.++
T Consensus 77 t~~~~~~G~-~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 77 TFVFLKNGV-KVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEEETTE-EEEEEES-CCHHHHHHHHHHT
T ss_pred EEEEEcCCc-EEEEEcC-CCHHHHHHHHHHh
Confidence 998887654 3345677 7899999999875
No 173
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.42 E-value=3.1e-13 Score=102.59 Aligned_cols=101 Identities=14% Similarity=0.103 Sum_probs=88.3
Q ss_pred eEEeCC-CcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEE
Q 021368 34 VTIFTR-ENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 34 v~~lt~-~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i 111 (313)
+.++++ ++|++.+..+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++ ++.++++|+|.++ |++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~---~~~l~~~~~v~~~--Pt~ 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPT-VKFAKVDADN---NSEIVSKCRVLQL--PTF 94 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCSS--SEE
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCC---CHHHHHHcCCCcc--cEE
Confidence 788998 999988888888899999999 9999999999999999965 9999999998 6699999999999 999
Q ss_pred EEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 112 AYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+++.+|. ....+.| .+.+.|.+++.++++
T Consensus 95 ~i~~~G~-~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 95 IIARSGK-MLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEETTE-EEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEEeCCe-EEEEEeC-CCHHHHHHHHHHHhc
Confidence 8886654 2334667 788999999999875
No 174
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.42 E-value=4.8e-14 Score=104.47 Aligned_cols=86 Identities=10% Similarity=0.084 Sum_probs=67.1
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCC---CcEEEEEEeCCCccc----ccCCCCcCceEEEEeCCCCCcCce
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV---DSIVIAKMDGTTNEH----HRAKSDGFPTILFFPAGNKSFDPI 249 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~---~~v~~~~vd~~~~~~----~~~~v~~~P~i~~~~~g~~~~~~~ 249 (313)
+...++|+||++||++|+.+.+.+. ..+... ..+.+.++|++.+.. ..++|.++||+++|++|+.+.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~---~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~--- 90 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIA---PQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESG--- 90 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTT---TTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEE---
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHH---hhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEe---
Confidence 3467999999999999999986433 223221 126788889888742 578999999999999998876
Q ss_pred eeccCcCHHHHHHHHHhcC
Q 021368 250 NVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 250 ~y~g~~~~~~l~~fi~~~~ 268 (313)
++.|....+.|.+||+..+
T Consensus 91 Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 91 RLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp EEECCCCHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHHH
Confidence 8899999999999998764
No 175
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.41 E-value=4e-13 Score=102.27 Aligned_cols=103 Identities=11% Similarity=0.104 Sum_probs=85.8
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
.+.+..++.+.+......+..++|.||++| ++|+.+.|.|.+++.++++.+.|+.||++. ++.++++|||.++ |
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~---~~~l~~~~~v~~~--P 98 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDK---NESLARKFSVKSL--P 98 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGG---CHHHHHHTTCCSS--S
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC---CHHHHHHcCCCCc--C
Confidence 344445555556666677778889999999 999999999999999999889999999998 6699999999999 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHH
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGED 139 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 139 (313)
+++++++|. ....+.|.++.+.|.+|+.+
T Consensus 99 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 99 TIILLKNKT-MLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEEEETTE-EEEEESSCCCHHHHHHHHTT
T ss_pred EEEEEECCE-EEEEecCCCCHHHHHHHHHh
Confidence 998986553 44567899999999999875
No 176
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.41 E-value=3.5e-13 Score=99.79 Aligned_cols=103 Identities=21% Similarity=0.265 Sum_probs=86.6
Q ss_pred ceEEe-CCCcccccccC----CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 33 LVTIF-TRENAPSVFES----PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 33 ~v~~l-t~~~~~~~~~~----~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
.+..+ +.++|++.+.. +..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.||++. ++.++++|+|.++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~ 79 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA---VAAVAEAAGITAM 79 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT---THHHHHHHTCCBS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCc---hHHHHHHcCCCcc
Confidence 35666 45778877654 678899999999 999999999999999999779999999998 6699999999999
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+++++.+|. ....+.|. +.+.|.+|+.++++
T Consensus 80 --Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 80 --PTFHVYKDGV-KADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp --SEEEEEETTE-EEEEEESC-CHHHHHHHHHHHHC
T ss_pred --cEEEEEECCe-EEEEEcCC-CHHHHHHHHHHHhc
Confidence 9998887654 33456787 99999999998864
No 177
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.40 E-value=2.9e-13 Score=113.35 Aligned_cols=126 Identities=10% Similarity=-0.013 Sum_probs=103.7
Q ss_pred ccccCCCCCCHHHHHHHHHhcC--CCceEEeCCCcccccccCCCcc-EEEEEeeC-CchhhhhHHHHHHHHhcc----Ce
Q 021368 9 ISYFADGKFDKSTIADFVFSNK--LPLVTIFTRENAPSVFESPIKN-QLLLFAVS-NDSEKLLPVFEEAAKSFK----GK 80 (313)
Q Consensus 9 ~~~y~~g~~~~~~l~~fi~~~~--~~~v~~lt~~~~~~~~~~~~~~-~v~f~~~~-~~c~~~~~~~~~~a~~~~----~~ 80 (313)
...| .|..+..++..|+.... ......++.++++.+.....++ +|.||++| ++|+.+.|.|.+++.++. +.
T Consensus 92 ~~~~-~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~ 170 (226)
T 1a8l_A 92 GVRY-FGLPAGHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGK 170 (226)
T ss_dssp SEEE-ESCCCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEE-eccCcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCc
Confidence 4678 88888888888886532 1234567787877776555566 88899999 999999999999999998 57
Q ss_pred EEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 81 LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 81 v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
+.|+.||++. ++.++++|||.++ |+++++..|. ....+.|.++.+.|.+|+.+.+
T Consensus 171 v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 171 ILGDMVEAIE---YPEWADQYNVMAV--PKIVIQVNGE-DRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEEEEEEGGG---CHHHHHHTTCCSS--CEEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEEEccc---CHHHHHhCCCccc--CeEEEEeCCc-eeEEEcCCCCHHHHHHHHHHhh
Confidence 9999999998 6699999999999 9998887664 3456789999999999998875
No 178
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.39 E-value=6.6e-13 Score=98.11 Aligned_cols=100 Identities=13% Similarity=0.082 Sum_probs=85.4
Q ss_pred ceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEE
Q 021368 33 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 33 ~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i 111 (313)
.....+.++|+..+..+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||++. ++.++++|+|.++ |++
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~---~~~l~~~~~v~~~--Pt~ 81 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDE---LGDVAQKNEVSAM--PTL 81 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCSS--SEE
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCC---CHHHHHHcCCCcc--CEE
Confidence 3445667788888888888999999999 9999999999999999988 9999999998 6699999999999 999
Q ss_pred EEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 112 AYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
+++++|. ....+.|. +.+.|.+++.++
T Consensus 82 ~~~~~G~-~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 82 LLFKNGK-EVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEETTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred EEEECCE-EEEEEeCC-CHHHHHHHHHhh
Confidence 9998554 33445676 779999999875
No 179
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.39 E-value=3.2e-13 Score=104.74 Aligned_cols=103 Identities=8% Similarity=0.075 Sum_probs=77.7
Q ss_pred ceEEeCCCcccccccCCCccEEEEEeeC---CchhhhhHHHHHHHHhccCeEE--EEEEeCCCcccccchhhhhCCCCCC
Q 021368 33 LVTIFTRENAPSVFESPIKNQLLLFAVS---NDSEKLLPVFEEAAKSFKGKLI--FVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 33 ~v~~lt~~~~~~~~~~~~~~~v~f~~~~---~~c~~~~~~~~~~a~~~~~~v~--f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
.+..++.++|++.+......+|+|++.| ++|+.+.|.|.+++.++ +++. |+.||+++ ++.++++|||.++
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~---~~~la~~~~V~~i- 92 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQ---SEAIGDRFNVRRF- 92 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHH---HHHHHHTTTCCSS-
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCC---CHHHHHhcCCCcC-
Confidence 6789999999998877666777777765 78999999999999999 7788 99999998 6799999999999
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|++++|++|. ....+.|.++.+.|.+|+.+.+.
T Consensus 93 -PT~~~fk~G~-~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 93 -PATLVFTDGK-LRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp -SEEEEESCC-----CEESCCCHHHHHHHHHHHHC
T ss_pred -CeEEEEeCCE-EEEEEeCCCCHHHHHHHHHHHhc
Confidence 9999997665 34457899999999999999986
No 180
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.39 E-value=3.7e-13 Score=99.90 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=88.8
Q ss_pred CCCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCC
Q 021368 30 KLPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 108 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~ 108 (313)
..+....++.++|++.+..+..++|+||++| ++|+.+.|.|.+++.++.+ +.|+.||++. ++.++++|||.++
T Consensus 7 ~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~---~~~~~~~~~v~~~-- 80 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDE---VSEVTEKENITSM-- 80 (112)
T ss_dssp --CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---THHHHHHTTCCSS--
T ss_pred ceeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCC---CHHHHHHcCCCcc--
Confidence 3456778899999998888888899999999 9999999999999999987 9999999998 6699999999999
Q ss_pred cEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 109 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 109 P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|+++++.+|. ....+.|. +.+.|.+|+.+.+
T Consensus 81 Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 81 PTFKVYKNGS-SVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp SEEEEEETTE-EEEEEESC-CHHHHHHHHHTTC
T ss_pred cEEEEEECCc-EEEEEeCC-CHHHHHHHHHHhh
Confidence 9998887654 33456787 9999999998764
No 181
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.39 E-value=1.2e-12 Score=96.26 Aligned_cols=100 Identities=9% Similarity=0.125 Sum_probs=81.9
Q ss_pred eEEe-CCCcccccc--cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCc
Q 021368 34 VTIF-TRENAPSVF--ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 34 v~~l-t~~~~~~~~--~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P 109 (313)
+.++ +.++|++.+ ..+...+|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++ ++.++++|||.++ |
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~---~~~~~~~~~v~~~--P 76 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQ-AVFLEVDVHQ---CQGTAATNNISAT--P 76 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---SHHHHHHTTCCSS--S
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCC-cEEEEEECcc---CHHHHHhcCCCcc--c
Confidence 3444 567888877 46778889999999 9999999999999999955 9999999998 6699999999999 9
Q ss_pred EEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 110 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
+++++.+|. ....+.| ...++|.+|+.+++
T Consensus 77 t~~~~~~G~-~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 77 TFQFFRNKV-RIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp EEEEEETTE-EEEEEES-SCHHHHHHHHHHHH
T ss_pred EEEEEECCe-EEEEEeC-CCHHHHHHHHHHhc
Confidence 999987664 2334567 45566999998875
No 182
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.39 E-value=6.1e-13 Score=100.18 Aligned_cols=105 Identities=18% Similarity=0.260 Sum_probs=89.2
Q ss_pred CCCceEEeCCCccccccc----CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCC
Q 021368 30 KLPLVTIFTRENAPSVFE----SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGIT 104 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~~----~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~ 104 (313)
..+.+..++.++|+..+. .+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++ ++.++++|||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~---~~~~~~~~~v~ 86 (122)
T 2vlu_A 11 AAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDE---LKPIAEQFSVE 86 (122)
T ss_dssp -CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCC
T ss_pred CCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCC---CHHHHHHcCCC
Confidence 345677888888888664 3678888999999 9999999999999999998 9999999998 66999999999
Q ss_pred CCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 105 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 105 ~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
++ |+++++.+|. ....+.|.. .+.|.+|+.++++
T Consensus 87 ~~--Pt~~~~~~G~-~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 87 AM--PTFLFMKEGD-VKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SS--SEEEEEETTE-EEEEEESSC-HHHHHHHHHHHHS
T ss_pred cc--cEEEEEeCCE-EEEEEeCcC-HHHHHHHHHHHhc
Confidence 99 9998887654 334567878 9999999999875
No 183
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1.4e-12 Score=96.55 Aligned_cols=102 Identities=17% Similarity=0.169 Sum_probs=82.9
Q ss_pred eEEeCC-CcccccccC---CCccEEEEEeeC-CchhhhhHHHHHHHHhcc-CeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 34 VTIFTR-ENAPSVFES---PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-GKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 34 v~~lt~-~~~~~~~~~---~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~-~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
|..+++ ++|++.+.. +..++|.||++| ++|+.+.|.|.+++.++. +.+.|+.||++. ++.++++|||.++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~- 77 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE---NSEISELFEISAV- 77 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT---CHHHHHHTTCCSS-
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc---CHHHHHHcCCCcc-
Confidence 567887 888887765 678888999999 999999999999999953 349999999998 6699999999999
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+++++.+|. ....+.|. ..+.|.+++.++++
T Consensus 78 -Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 78 -PYFIIIHKGT-ILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp -SEEEEEETTE-EEEEECSC-CHHHHHHHHHHHHH
T ss_pred -cEEEEEECCE-EEEEecCC-CHHHHHHHHHHHHh
Confidence 9998887554 33446676 55679999998864
No 184
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.09 E-value=3.4e-14 Score=108.46 Aligned_cols=89 Identities=20% Similarity=0.291 Sum_probs=74.0
Q ss_pred cCCCcEEEEEeCCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCCc--cc--ccCCCCcCceEEEE--eCCCC--
Q 021368 176 DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN--EH--HRAKSDGFPTILFF--PAGNK-- 244 (313)
Q Consensus 176 ~~~k~~lv~fy~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~~--~~--~~~~v~~~P~i~~~--~~g~~-- 244 (313)
..+++++|+||++||++|+.+.+.+ .+++..+.. ++.++.+|++.. .. ..|++.++|++++| .+|..
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 4678999999999999999999999 888887765 588899998533 22 68999999999999 45665
Q ss_pred CcCceeeccCcCHHHHHHHHHhcCC
Q 021368 245 SFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 245 ~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+. ++.|..+.+.|.++|++.++
T Consensus 95 ~~---~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 95 VG---RLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 43 78898888999999998865
No 185
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.38 E-value=1.1e-11 Score=105.37 Aligned_cols=208 Identities=12% Similarity=0.109 Sum_probs=152.3
Q ss_pred CCCceEEeCC-CcccccccC-CCccEEEEEeeCCchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 30 KLPLVTIFTR-ENAPSVFES-PIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 30 ~~~~v~~lt~-~~~~~~~~~-~~~~~v~f~~~~~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
+-|.+.+|+. ++++.++.. ...++|.||.+ .|....+.|.++|..+.+.+.|+... +..+++++++.
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~--~~~~~~~~F~~~A~~lr~~~~F~~t~------~~~v~~~~~v~--- 72 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGDDVVILGVFQG--VGDPGYLQYQDAANTLREDYKFHHTF------STEIAKFLKVS--- 72 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCSSCEEEEECSC--TTCHHHHHHHHHHHHHTTTCCEEEEC------CHHHHHHHTCC---
T ss_pred CCCCceecCCHHHHHHHHhcCCCeEEEEEEcC--CCchHHHHHHHHHHhhhcCcEEEEEC------cHHHHHHcCCC---
Confidence 3566777865 666666665 55677778876 47899999999999998889999864 33788999995
Q ss_pred CcEEEEEcCC------CCceeccC--CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCC
Q 021368 108 PKVLAYTGND------DAKKHILD--GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESK 179 (313)
Q Consensus 108 ~P~i~~~~~~------~~~~~~~~--g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k 179 (313)
.|+|++|+.+ ......|. |..+.+.|.+||....- +.|..++.+++.... .++
T Consensus 73 ~p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~-----------------Plv~e~t~~n~~~~~--~~~ 133 (250)
T 3ec3_A 73 LGKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHAL-----------------PLVGHRKTSNDAKRY--SKR 133 (250)
T ss_dssp SSEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSS-----------------CTEEEECTTTHHHHS--CSS
T ss_pred CCeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCC-----------------CceeecCccchhhhh--ccC
Confidence 3888888752 12345666 57899999999999743 568899999998866 367
Q ss_pred cEEEEEeCC-CC---c-cchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCc--C-ceEEEEeCCCCCcCce
Q 021368 180 DVLLEIYAP-WC---G-HCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG--F-PTILFFPAGNKSFDPI 249 (313)
Q Consensus 180 ~~lv~fy~~-~C---~-~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~--~-P~i~~~~~g~~~~~~~ 249 (313)
+.++.|+.. .+ . .+..+...+.++|+.++ .+.|+.+|+..+.. ..|++.. . |.++++..+.. ..
T Consensus 134 ~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k---ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~---ky 207 (250)
T 3ec3_A 134 PLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP---EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGK---KF 207 (250)
T ss_dssp SEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT---TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSC---EE
T ss_pred ccEEEEEecccccccchhHHHHHHHHHHHHHhhc---ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCc---ee
Confidence 777777753 22 2 23557888999999988 48999999887654 5677753 4 57777654332 11
Q ss_pred eec-cCcCHHHHHHHHHhcCCCCcc
Q 021368 250 NVD-VDRTVVALYKFLKKNASIPFK 273 (313)
Q Consensus 250 ~y~-g~~~~~~l~~fi~~~~~~~~~ 273 (313)
.+. +..+.+.|.+|+.+.+.-++.
T Consensus 208 ~~~~~~~t~~~i~~Fv~~~~~Gkl~ 232 (250)
T 3ec3_A 208 AMEPEEFDSDALREFVMAFKKGKLK 232 (250)
T ss_dssp ECCCCSCCHHHHHHHHHHHHTTCCC
T ss_pred cCCcccCCHHHHHHHHHHHHCCCcc
Confidence 344 578999999999999876643
No 186
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.37 E-value=2.4e-12 Score=97.19 Aligned_cols=106 Identities=15% Similarity=0.183 Sum_probs=88.2
Q ss_pred cCCCceEEeCCCccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCC
Q 021368 29 NKLPLVTIFTRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 29 ~~~~~v~~lt~~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
.....+..++.++|...+. .+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++. ++.++++|||.+
T Consensus 15 ~~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~--~~~~~~~~~v~~ 91 (124)
T 1faa_A 15 AIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQE--NKTLAKELGIRV 91 (124)
T ss_dssp TTTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST--THHHHHHHCCSS
T ss_pred hcCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcc--hHHHHHHcCCCe
Confidence 3456789999999988765 5678888999999 9999999999999999987 99999999832 568999999999
Q ss_pred CCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 106 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
+ |+++++.+|. ....+.|.. .+.|.+++.+.+
T Consensus 92 ~--Pt~~~~~~G~-~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 92 V--PTFKILKENS-VVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp S--SEEEEEETTE-EEEEEESSC-HHHHHHHHHHHT
T ss_pred e--eEEEEEeCCc-EEEEEcCCC-HHHHHHHHHHhh
Confidence 9 9988887664 233456765 899999998864
No 187
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.36 E-value=1.4e-12 Score=97.50 Aligned_cols=101 Identities=18% Similarity=0.294 Sum_probs=85.3
Q ss_pred CceEEeCC-Cccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 32 PLVTIFTR-ENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 32 ~~v~~lt~-~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
..+.+++. ++|+..+. .+..++|.||++| ++|+.+.|.|.+++.++ .+.|+.||++. ++.++++|||.++
T Consensus 13 ~~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~---~~~~~~~~~v~~~- 86 (117)
T 2xc2_A 13 SELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDK---LEETARKYNISAM- 86 (117)
T ss_dssp CEEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTT---SHHHHHHTTCCSS-
T ss_pred heeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCc---cHHHHHHcCCCcc-
Confidence 34788888 88888776 6778888999999 99999999999999999 59999999998 6699999999999
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|+++++.+|. ....+.| .+.+.|.+++.+++
T Consensus 87 -Pt~~~~~~G~-~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 87 -PTFIAIKNGE-KVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp -SEEEEEETTE-EEEEEES-SCHHHHHHHHHHHC
T ss_pred -ceEEEEeCCc-EEEEEeC-CCHHHHHHHHHHhC
Confidence 9998887654 3344567 68899999998763
No 188
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.36 E-value=1.1e-12 Score=97.08 Aligned_cols=101 Identities=9% Similarity=0.141 Sum_probs=84.6
Q ss_pred eEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEE
Q 021368 34 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 112 (313)
Q Consensus 34 v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~ 112 (313)
+..++.++| +.+..+...+|+||++| ++|+.+.|.|.+++..+.+ +.|+.||++. ++.++++|||.++ |+++
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~ 77 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQ-VAISSVDSEA---RPELMKELGFERV--PTLV 77 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTT-SCEEEEEGGG---CHHHHHHTTCCSS--CEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCC-cEEEEEcCcC---CHHHHHHcCCccc--CEEE
Confidence 456778888 55556678889999999 9999999999999999875 9999999988 6699999999998 9999
Q ss_pred EEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 113 YTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 113 ~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
++.+|. ....+.|..+.+.|.+++..+++
T Consensus 78 ~~~~G~-~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 78 FIRDGK-VAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp EEESSS-EEEEEESCCCHHHHHHHHHTC--
T ss_pred EEECCE-EEEEEcCCCCHHHHHHHHHHHhh
Confidence 986654 34456798999999999998765
No 189
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.36 E-value=1.3e-12 Score=95.13 Aligned_cols=99 Identities=12% Similarity=0.188 Sum_probs=82.3
Q ss_pred EEeCC-Cccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcE
Q 021368 35 TIFTR-ENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 110 (313)
Q Consensus 35 ~~lt~-~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~ 110 (313)
.++++ ++|++.+. .+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.+|++. ++.++++|||.++ |+
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~---~~~~~~~~~v~~~--Pt 75 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPE-VEFAKVDVDQ---NEEAAAKYSVTAM--PT 75 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCSS--SE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCC-CEEEEEeccC---CHHHHHHcCCccc--cE
Confidence 45555 67777766 5677888899999 9999999999999999985 9999999998 6699999999988 99
Q ss_pred EEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 111 LAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 111 i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
++++.+|. ....+.| .+.+.|.+|+.+++
T Consensus 76 ~~~~~~g~-~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 76 FVFIKDGK-EVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EEEEETTE-EEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEEeCCc-EEEEEeC-CCHHHHHHHHHhhC
Confidence 98887654 3344567 68999999998763
No 190
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.36 E-value=1.3e-12 Score=98.35 Aligned_cols=104 Identities=16% Similarity=0.201 Sum_probs=87.8
Q ss_pred CCceEEeCC-CcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 31 LPLVTIFTR-ENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 31 ~~~v~~lt~-~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
...+..+++ ++|++.+..+..++|+||++| ++|+.+.|.|.+++.++.+. +.|+.||++. ++.++++|+|.++
T Consensus 14 ~~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~---~~~~~~~~~v~~~- 89 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE---QSQIAQEVGIRAM- 89 (121)
T ss_dssp CCCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT---CHHHHHHHTCCSS-
T ss_pred CcceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC---CHHHHHHcCCCcc-
Confidence 345566665 778888877878899999999 99999999999999999886 9999999998 6699999999998
Q ss_pred CcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 108 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|+++++.+|. ....+.|. +.+.|.+|+.+.+
T Consensus 90 -Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 90 -PTFVFFKNGQ-KIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp -SEEEEEETTE-EEEEEESS-CHHHHHHHHHHHT
T ss_pred -cEEEEEECCe-EEeeEcCC-CHHHHHHHHHHhh
Confidence 9998887554 33446777 9999999999875
No 191
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.35 E-value=1e-12 Score=96.03 Aligned_cols=96 Identities=11% Similarity=0.214 Sum_probs=81.2
Q ss_pred CCCccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEE
Q 021368 38 TRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYT 114 (313)
Q Consensus 38 t~~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~ 114 (313)
+.++++..+. .+...+|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++ ++.++++|+|.++ |+++++
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~---~~~~~~~~~v~~~--Pt~~~~ 80 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDD---CQDVASESEVKSM--PTFQFF 80 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTT---CHHHHHHTTCCBS--SEEEEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhh---hHHHHHHcCCCcC--cEEEEE
Confidence 3455666665 6778889999999 9999999999999999988 9999999998 6799999999999 999999
Q ss_pred cCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 115 GNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 115 ~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
.+|. ....+.|. +.+.|.+|+.+++
T Consensus 81 ~~g~-~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 81 KKGQ-KVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp ETTE-EEEEEESS-CHHHHHHHHHHHC
T ss_pred ECCe-EEEEEeCC-CHHHHHHHHHHhC
Confidence 7664 33456787 9999999998763
No 192
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.33 E-value=1.2e-12 Score=109.85 Aligned_cols=126 Identities=8% Similarity=-0.020 Sum_probs=104.1
Q ss_pred CCcccccCCCCCCHHHHHHHHHhcC--CCceEEeCCCcccccccCCCcc-EEEEEeeC-CchhhhhHHHHHHHHhccCeE
Q 021368 6 TEKISYFADGKFDKSTIADFVFSNK--LPLVTIFTRENAPSVFESPIKN-QLLLFAVS-NDSEKLLPVFEEAAKSFKGKL 81 (313)
Q Consensus 6 ~~~~~~y~~g~~~~~~l~~fi~~~~--~~~v~~lt~~~~~~~~~~~~~~-~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v 81 (313)
.+....| +|..+..++..|+.... .+.+..++.++++.+.....++ ++.||++| ++|+.+.|.|.+++.++. .+
T Consensus 91 ~~~~~~~-~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~-~v 168 (229)
T 2ywm_A 91 KDYGIRY-IGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND-YI 168 (229)
T ss_dssp SCCCEEE-ESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TE
T ss_pred Cccccee-cCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC-Ce
Confidence 3456789 99988899999987643 2456788888888876555566 56799999 999999999999999995 59
Q ss_pred EEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 82 IFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 82 ~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
.|+.||++. ++.++++|||.++ |++++ +|. ...+.|.++.+.|.+|+.+.++
T Consensus 169 ~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~--~G~--~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 169 TSKVIDASE---NQDLAEQFQVVGV--PKIVI--NKG--VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp EEEEEEGGG---CHHHHHHTTCCSS--SEEEE--GGG--TEEEESCCCHHHHHHHHHHHHH
T ss_pred EEEEEECCC---CHHHHHHcCCccc--CEEEE--CCE--EEEeeCCCCHHHHHHHHHHHhh
Confidence 999999998 6699999999999 99977 333 3457899999999999998865
No 193
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2.2e-13 Score=105.02 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=84.5
Q ss_pred CCCceEEeCCCcccccccCCC--ccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcccccchhhhhCCC-
Q 021368 30 KLPLVTIFTRENAPSVFESPI--KNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDVGKPVSEYFGIT- 104 (313)
Q Consensus 30 ~~~~v~~lt~~~~~~~~~~~~--~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~~~~~l~~~~~v~- 104 (313)
....+..++.++|+..+.... +++|.||++| ++|+.+.|.|.+++.++.+ .+.|+.||+++ ++.++++|+|.
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~---~~~~~~~~~v~~ 81 (137)
T 2dj0_A 5 SSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR---YTDVSTRYKVST 81 (137)
T ss_dssp CCSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT---CHHHHHHTTCCC
T ss_pred CCceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc---CHHHHHHccCcc
Confidence 345688999999998775554 6788999999 9999999999999999986 79999999998 66999999998
Q ss_pred -----CCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHH
Q 021368 105 -----GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGED 139 (313)
Q Consensus 105 -----~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 139 (313)
++ |+++++..|. ....+.|..+.+.|.+|+.+
T Consensus 82 ~~~~~~~--Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 82 SPLTKQL--PTLILFQGGK-EAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp CSSSSCS--SEEEEESSSS-EEEEESCBCSSSCBCCCCCC
T ss_pred cCCcCCC--CEEEEEECCE-EEEEecCcCchHHHHHHHhc
Confidence 88 9999997664 33446677666666555543
No 194
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.31 E-value=1.8e-12 Score=101.42 Aligned_cols=101 Identities=13% Similarity=0.081 Sum_probs=84.7
Q ss_pred CCCcccccc--cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEE
Q 021368 38 TRENAPSVF--ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYT 114 (313)
Q Consensus 38 t~~~~~~~~--~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~ 114 (313)
+.++|+..+ ..+.+++|.||++| ++|+.+.|.|.+++.++.+.+.|+.||+++ ++.++++|+|.++ |+++++
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~---~~~l~~~~~v~~~--Pt~~~~ 84 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQ---TAVYTQYFDISYI--PSTVFF 84 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTT---CCHHHHHTTCCSS--SEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCc---CHHHHHHcCCCcc--CeEEEE
Confidence 556677765 45678888999999 999999999999999999989999999988 6699999999999 998888
Q ss_pred cCCCCce--------eccCC-CCCHHHHHHHHHHHhcC
Q 021368 115 GNDDAKK--------HILDG-ELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 115 ~~~~~~~--------~~~~g-~~~~~~i~~fi~~~~~~ 143 (313)
..|.... ..+.| ..+.+.|.++++..+.|
T Consensus 85 ~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 85 FNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp ETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred ECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 7664220 35678 88999999999988654
No 195
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.31 E-value=3.2e-12 Score=100.54 Aligned_cols=96 Identities=16% Similarity=0.289 Sum_probs=76.2
Q ss_pred cChHHHhh---cCCCcEEEEEe-CCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCCcc-------------ccc
Q 021368 168 NNFDEIVL---DESKDVLLEIY-APWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE-------------HHR 227 (313)
Q Consensus 168 ~~f~~~l~---~~~k~~lv~fy-~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~~~-------------~~~ 227 (313)
.++.+.+. ..+++++|+|| ++||++|+.+.+.+ .++...+.. ++.++.+|++... ...
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~~~~~~~~~~~~l~~~ 111 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNHQPEEQRQKNQELKAQ 111 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccCCChhhHhhHHHHHHH
Confidence 34555442 34789999999 99999999999999 777666543 6899999998763 167
Q ss_pred CCCCcCceEEEE-eCCCCCcCceeeccCc--CHHHHHHHHHhcCC
Q 021368 228 AKSDGFPTILFF-PAGNKSFDPINVDVDR--TVVALYKFLKKNAS 269 (313)
Q Consensus 228 ~~v~~~P~i~~~-~~g~~~~~~~~y~g~~--~~~~l~~fi~~~~~ 269 (313)
|++.++|+++++ ++|+.+. .+ |.. +.+.|.++|++.+.
T Consensus 112 ~~v~~~Pt~~~~d~~G~~~~---~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 112 YKVTGFPELVFIDAEGKQLA---RM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp TTCCSSSEEEEECTTCCEEE---EE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEEcCCCCEEE---Ee-cCCCCCHHHHHHHHHHHHh
Confidence 999999999999 6777653 56 876 89999999998754
No 196
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.31 E-value=3.9e-12 Score=96.26 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=84.4
Q ss_pred CCceEEe-CCCccccccc----CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCC
Q 021368 31 LPLVTIF-TRENAPSVFE----SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGIT 104 (313)
Q Consensus 31 ~~~v~~l-t~~~~~~~~~----~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~ 104 (313)
...+..+ +.++|+..+. .+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||++. ++.++++|+|.
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~-v~~~~vd~d~---~~~l~~~~~v~ 90 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN-VLFLKVDTDE---LKSVASDWAIQ 90 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSS-EEEEEEETTT---SHHHHHHTTCC
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECcc---CHHHHHHcCCC
Confidence 3456667 5577777664 3667888999999 9999999999999999985 9999999998 66999999999
Q ss_pred CCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 105 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 105 ~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
++ |+++++.+|. ....+.| .+.+.|.+++.+++
T Consensus 91 ~~--Pt~~~~~~G~-~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 91 AM--PTFMFLKEGK-ILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SS--SEEEEEETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred cc--CEEEEEECCE-EEEEEeC-CCHHHHHHHHHHhc
Confidence 99 9998886654 3334567 58999999998875
No 197
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.30 E-value=2.5e-12 Score=99.72 Aligned_cols=101 Identities=7% Similarity=-0.015 Sum_probs=81.4
Q ss_pred CCCccccccc--CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEE
Q 021368 38 TRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYT 114 (313)
Q Consensus 38 t~~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~ 114 (313)
+.++|+..+. .+.+++|.||++| ++|+.+.|.|.+++.++.+.+.|+.||+++ ++.++++|+|.++ |+++++
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~---~~~~~~~~~i~~~--Pt~~~~ 84 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE---VPDFNKMYELYDP--CTVMFF 84 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT---CCTTTTSSCSCSS--CEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc---CHHHHHHcCCCCC--CEEEEE
Confidence 3455665432 4667888999999 999999999999999998889999999998 6699999999988 999998
Q ss_pred cCCCCcee--------ccCCCCC-HHHHHHHHHHHhcC
Q 021368 115 GNDDAKKH--------ILDGELT-LDKIKTFGEDFLEG 143 (313)
Q Consensus 115 ~~~~~~~~--------~~~g~~~-~~~i~~fi~~~~~~ 143 (313)
.+|..... .+.|..+ .+.+.+++++.+.+
T Consensus 85 ~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 85 FRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp ETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred ECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 77653221 3456564 89999999998764
No 198
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.30 E-value=1.5e-12 Score=100.00 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=88.6
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeC---------CCcccccchhhh
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQM---------DNEDVGKPVSEY 100 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~---------~~~~~~~~l~~~ 100 (313)
...+..++.++|+..+.. +++|.||++| ++|+.+.|.|.+++.+++ +.|+.||+ +. ++.++++
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~---~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSA---ARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHH---HHHHHHH
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhh---hHHHHHH
Confidence 346788899999988876 8888999999 999999999999999997 89999999 54 6799999
Q ss_pred hCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 101 FGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 101 ~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
|||.++ |+++++++|. ....+.|..+.+.+..++++.+++
T Consensus 88 ~~v~~~--Pt~~~~~~G~-~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 88 AGVEGT--PTLVFYKEGR-IVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HTCCSS--SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHC--
T ss_pred cCCcee--CeEEEEcCCE-EEEEEeCCCCHHHHHHHHHHHhCC
Confidence 999999 9999998654 345678999999999999998764
No 199
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.29 E-value=2.4e-12 Score=94.05 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=76.8
Q ss_pred CeEEE-cCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc------cccCCCCc-
Q 021368 161 DVKIV-VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------HHRAKSDG- 232 (313)
Q Consensus 161 ~v~~l-~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~------~~~~~v~~- 232 (313)
....| +.+.|++.+. .+++++|+|+|+||++|+.+.+.|++++.. . ++.++.+|++.+. ..+++|.+
T Consensus 7 ~~~~i~s~e~f~~ii~-~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~--~v~~~~vdVde~r~~Sn~IA~~~~V~h~ 81 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIE-ENKYVFVLKHSETCPISANAYDQFNKFLYE--R--DMDGYYLIVQQERDLSDYIAKKTNVKHE 81 (112)
T ss_dssp CEEECCSHHHHHHHHH-HCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H--TCCEEEEEGGGGHHHHHHHHHHHTCCCC
T ss_pred ceeecCCHHHHHHHHh-cCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C--CceEEEEEeecCchhhHHHHHHhCCccC
Confidence 34555 3466777664 489999999999999999999999999984 2 6899999999884 26899995
Q ss_pred CceEEEEeCCCCCcCceeeccCcCHHHHHHHH
Q 021368 233 FPTILFFPAGNKSFDPINVDVDRTVVALYKFL 264 (313)
Q Consensus 233 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi 264 (313)
.|++++|++|..+.+ .-.+..+...|.+.+
T Consensus 82 sPq~il~k~G~~v~~--~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 82 SPQAFYFVNGEMVWN--RDHGDINVSSLAQAE 111 (112)
T ss_dssp SSEEEEEETTEEEEE--EEGGGCSHHHHHHHT
T ss_pred CCeEEEEECCEEEEE--eeccccCHHHHHHhh
Confidence 999999999998641 244677777776553
No 200
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.29 E-value=2.1e-12 Score=96.21 Aligned_cols=99 Identities=11% Similarity=0.129 Sum_probs=81.1
Q ss_pred ceEEeCC-CcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcE
Q 021368 33 LVTIFTR-ENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 110 (313)
Q Consensus 33 ~v~~lt~-~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~ 110 (313)
.+..+++ ++++.++..+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++ ++.++++|+|.++ |+
T Consensus 13 ~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~---~~~l~~~~~v~~~--Pt 86 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDE---SPDIAKECEVTAM--PT 86 (114)
T ss_dssp GSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCSB--SE
T ss_pred heeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC---CHHHHHHCCCCcc--cE
Confidence 3444444 445666777778899999999 9999999999999999998 9999999998 6699999999999 99
Q ss_pred EEEEcCCCCceeccCCCCCHHHHHHHHHH
Q 021368 111 LAYTGNDDAKKHILDGELTLDKIKTFGED 139 (313)
Q Consensus 111 i~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 139 (313)
++++.+|. ....+.|.. .+.|.+++.+
T Consensus 87 ~~~~~~G~-~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 87 FVLGKDGQ-LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEEETTE-EEEEEESSC-HHHHHHHHHT
T ss_pred EEEEeCCe-EEEEEeCCC-HHHHHHHHHh
Confidence 98886654 334567777 8999998865
No 201
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.28 E-value=1.9e-11 Score=94.77 Aligned_cols=101 Identities=13% Similarity=0.208 Sum_probs=81.6
Q ss_pred EEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC--------------------
Q 021368 163 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------------------- 222 (313)
Q Consensus 163 ~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-------------------- 222 (313)
..++++.+..... .+++++|+||++||++|+.+.+.+.+++..+.+. +.++.++++.
T Consensus 15 ~~~~g~~~~~~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLI-GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ--LNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--SEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhc-CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC--cEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 5677877766543 5789999999999999999999999999999873 8888888653
Q ss_pred -------ccc--ccCCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 223 -------NEH--HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 223 -------~~~--~~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+.. ..|++.++|+++++ ++|..+. .+.|..+.+.|.++|++.+.
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRH---FQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEE---EEESCSTTHHHHHHHHHHHT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEE---EecCCCCHHHHHHHHHHHHh
Confidence 111 57899999999999 5665543 67788888999999998764
No 202
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.27 E-value=4.9e-11 Score=112.12 Aligned_cols=176 Identities=14% Similarity=0.108 Sum_probs=128.9
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 129 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~ 129 (313)
++.+.+|.+. ..|+++...+++++..- +++.+...+ + . . ... |++.+.+.+....+.|.|-..
T Consensus 20 ~v~l~~~~~~~~~~~~~~~~~~~~~~~s-~~i~~~~~~--~---~-~-------~~~--p~~~~~~~~~~~~i~f~g~p~ 83 (521)
T 1hyu_A 20 PVELIATLDDSAKSAEIKELLAEIAELS-DKVTFKEDN--T---L-P-------VRK--PSFLITNPGSQQGPRFAGSPL 83 (521)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTTC-TTEEEEECT--T---S-S-------SCS--SEEEEECTTCCCSCEEESCCC
T ss_pred CEEEEEEeCCCcchHHHHHHHHHHHHhC-CceEEEEcC--C---c-c-------cCC--CEEEEecCCCcceEEEeccCc
Confidence 4445566666 67999999999987654 457764321 1 1 1 334 999888766556678889888
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcC
Q 021368 130 LDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG 209 (313)
Q Consensus 130 ~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~ 209 (313)
-.++..|+..++.-.- .-..++.+.++.+.....+..++.||++||++|+.+.+.+.+++..+.
T Consensus 84 g~e~~s~~~~l~~~~~---------------~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~- 147 (521)
T 1hyu_A 84 GHEFTSLVLALLWTGG---------------HPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP- 147 (521)
T ss_dssp GGGHHHHHHHHHHHTT---------------CCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-
T ss_pred chhHHHHHHHHHhhcC---------------CCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-
Confidence 8888888887754111 112355556665543345677999999999999999999999998864
Q ss_pred CCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 210 VDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 210 ~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
++.+..+|.+.+.. .++++.++|++++ +|+.+ ..|....+.|.+|+...
T Consensus 148 --~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g~~~-----~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 148 --RIKHTAIDGGTFQNEITERNVMGVPAVFV--NGKEF-----GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp --TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE-----EESCCCHHHHHHHHCCS
T ss_pred --ceEEEEEechhhHHHHHHhCCCccCEEEE--CCEEE-----ecCCCCHHHHHHHHhhc
Confidence 59999999998776 7899999999977 66553 44888889999998665
No 203
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.27 E-value=6.6e-12 Score=92.91 Aligned_cols=102 Identities=20% Similarity=0.207 Sum_probs=83.5
Q ss_pred ceEEe-CCCcccccccC----CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 33 LVTIF-TRENAPSVFES----PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 33 ~v~~l-t~~~~~~~~~~----~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
.+..+ +.++|++.+.. +..++|+||++| ++|+.+.|.|.+++.++.+ +.|+.||++. ++.++++|||.++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~---~~~~~~~~~v~~~ 80 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN-VTFLKVDVDE---LKAVAEEWNVEAM 80 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSS-EEEEEEETTT---CHHHHHHHHCSST
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCC-cEEEEEEccc---cHHHHHhCCCCcc
Confidence 45555 55777776653 667888899999 9999999999999999985 9999999998 6699999999998
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+++++.+|. ....+.| .+.+.|.+++.+++.
T Consensus 81 --Pt~~~~~~G~-~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 81 --PTFIFLKDGK-LVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp --TEEEEEETTE-EEEEEEC-CCTTHHHHHHHHHHH
T ss_pred --cEEEEEeCCE-EEEEEec-CCHHHHHHHHHHhhc
Confidence 9998887654 2334566 688999999998864
No 204
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.27 E-value=1.5e-11 Score=93.91 Aligned_cols=99 Identities=20% Similarity=0.353 Sum_probs=76.0
Q ss_pred EEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc-------------------
Q 021368 163 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------- 223 (313)
Q Consensus 163 ~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~------------------- 223 (313)
..++++.+.-... .+++++|+||++||++|+.+.+.+.+++.++. ++.++.++++..
T Consensus 10 ~~~~g~~~~l~~~-~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1lu4_A 10 TTLSGAPFDGASL-QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNLN 85 (136)
T ss_dssp EBTTSCEEEGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEEE
T ss_pred ecCCCCeecHHHh-CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEEE
Confidence 3344444433222 57899999999999999999999999999986 588888888762
Q ss_pred ---cc--ccCCCCcCceEEEEeCCCCCcCceeec---cCcCHHHHHHHHHhcC
Q 021368 224 ---EH--HRAKSDGFPTILFFPAGNKSFDPINVD---VDRTVVALYKFLKKNA 268 (313)
Q Consensus 224 ---~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~---g~~~~~~l~~fi~~~~ 268 (313)
.. ..|++.++|+++++..+..+ . .+. |..+.+.|.++|++.+
T Consensus 86 d~~~~~~~~~~i~~~P~~~lid~~G~i-~--~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 86 DADGVIWARYNVPWQPAFVFYRADGTS-T--FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp CTTSHHHHHTTCCSSSEEEEECTTSCE-E--EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCchhHHHhcCCCCCCEEEEECCCCcE-E--EEEcCCCccCHHHHHHHHHHHh
Confidence 22 57899999999999544433 2 677 8889999999998875
No 205
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.92 E-value=4.2e-13 Score=98.03 Aligned_cols=101 Identities=23% Similarity=0.240 Sum_probs=85.2
Q ss_pred eEEeCCCcccccc-cCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEE
Q 021368 34 VTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 34 v~~lt~~~~~~~~-~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i 111 (313)
+..++.+++...+ ..+..++|+||++| ++|+.+.|.|.+++.++.+.+.|+.+|++. +..++++|||.++ |++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~ 77 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE---NPNTAAQYGIRSI--PTL 77 (106)
Confidence 5678888888644 55667888899999 999999999999999999889999999998 5699999999998 999
Q ss_pred EEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 112 AYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
+++.+|. ....+.|..+.+.|.+|+.+.
T Consensus 78 ~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 78 LLFKNGQ-VVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 8886553 344678888999999988764
No 206
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.25 E-value=1e-11 Score=92.62 Aligned_cols=103 Identities=22% Similarity=0.248 Sum_probs=85.3
Q ss_pred CceEEe-CCCcccccccC----CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCC
Q 021368 32 PLVTIF-TRENAPSVFES----PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 32 ~~v~~l-t~~~~~~~~~~----~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
+.+..+ +.++|+..+.. +...+|+||++| ++|+.+.|.|.+++.++.+ +.|+.||++. ++.++++|+|.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~~~~---~~~~~~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPG-AIFLKVDVDE---LKDVAEAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---SHHHHHHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCC-cEEEEEEccc---CHHHHHHcCCCc
Confidence 456666 45778776654 668888999999 9999999999999999985 9999999998 669999999999
Q ss_pred CCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 106 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+ |+++++.+|. ....+.| .+.+.|.+++.++++
T Consensus 82 ~--Pt~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 82 M--PTFLFIKDGE-KVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp B--SEEEEEETTE-EEEEEES-CCHHHHHHHHHHHHC
T ss_pred C--cEEEEEeCCe-EEEEecC-CCHHHHHHHHHHHhc
Confidence 8 9998887654 2334566 589999999999875
No 207
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.25 E-value=1.8e-12 Score=97.07 Aligned_cols=103 Identities=11% Similarity=0.139 Sum_probs=82.5
Q ss_pred CCceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc---cccchhhhhCCCCC
Q 021368 31 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED---VGKPVSEYFGITGE 106 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~---~~~~l~~~~~v~~~ 106 (313)
...+..++.+++...+..+..++|+||++| ++|+.+.|.|.+++.++...+.++ |++... .++.++++|||.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~~~ 88 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFI--NSEEPSQLNDLQAFRSRYGIPTV 88 (118)
T ss_dssp TTTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEE--ETTCGGGHHHHHHHHHHHTCCSS
T ss_pred HhhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEE--ECCCcCcHHHHHHHHHHcCCCCC
Confidence 345678888999888877788899999999 999999999999999987655554 444321 14578999999999
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHH
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGE 138 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~ 138 (313)
|+++++.+|. ....+.|..+.+.|.+|+.
T Consensus 89 --Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 89 --PGFVHITDGQ-INVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp --CEEEEEETTE-EEEECCTTCCHHHHHHHHT
T ss_pred --CeEEEEECCE-EEEEecCCCCHHHHHHHhh
Confidence 9999887664 3456789999999999885
No 208
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.25 E-value=2.6e-12 Score=94.41 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=58.7
Q ss_pred CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC------Cccc--ccCCCCcCceEEEEeCCCCCcCce
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT------TNEH--HRAKSDGFPTILFFPAGNKSFDPI 249 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~------~~~~--~~~~v~~~P~i~~~~~g~~~~~~~ 249 (313)
++.++|.||++||++|+.+.|.|.+++..+. .+|++ .+.. ..|+|.++||+++ +|.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~------ 75 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR------ 75 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE------
Confidence 4667999999999999999999999986653 45555 2222 6899999999777 442
Q ss_pred eeccCcCHHHHHHHHHhc
Q 021368 250 NVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 250 ~y~g~~~~~~l~~fi~~~ 267 (313)
.|.|..+.+.|.+|+.-.
T Consensus 76 ~~~G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 76 TYTGVRSLEALAVASGYP 93 (106)
T ss_dssp EEESCCCHHHHHHHHTCC
T ss_pred EecCCCCHHHHHHHhCCc
Confidence 589999999999998443
No 209
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.25 E-value=6.3e-12 Score=99.95 Aligned_cols=88 Identities=18% Similarity=0.329 Sum_probs=66.9
Q ss_pred cCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc---cccCCC--CcCceEEEE-eCCCCCcCce
Q 021368 176 DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE---HHRAKS--DGFPTILFF-PAGNKSFDPI 249 (313)
Q Consensus 176 ~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~---~~~~~v--~~~P~i~~~-~~g~~~~~~~ 249 (313)
..+++++|+||++||++|+.+.|.|.+++..+.. .+.|+.+|++.+. ...+++ .++|++++| ++|+.+.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~--- 118 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHP--- 118 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCT---
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEE---
Confidence 4679999999999999999999999998776543 2344455555442 356776 669999999 6787764
Q ss_pred eecc----------CcCHHHHHHHHHhcC
Q 021368 250 NVDV----------DRTVVALYKFLKKNA 268 (313)
Q Consensus 250 ~y~g----------~~~~~~l~~fi~~~~ 268 (313)
++.| ..+.+.|.++|++.+
T Consensus 119 ~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 119 EIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred EEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 4555 378899999998875
No 210
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.24 E-value=2.1e-11 Score=96.43 Aligned_cols=104 Identities=18% Similarity=0.294 Sum_probs=81.3
Q ss_pred CeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccC----------
Q 021368 161 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRA---------- 228 (313)
Q Consensus 161 ~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~---------- 228 (313)
.+..++++.+.-.-. .+++++|+||++||++|+.+.+.+.++..++++. ++.++.++++.... ..+
T Consensus 18 ~l~~~~g~~~~l~~~-~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~ 95 (165)
T 3or5_A 18 SGVTVDGKPFSSASL-KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR-GFTFVGIAVNEQLPNVKNYMKTQGIIYPV 95 (165)
T ss_dssp EEECTTSCEEEGGGG-TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-TEEEEEEECSCCHHHHHHHHHHHTCCSCE
T ss_pred eeeCCCCCEechhHc-CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCCce
Confidence 344455555443322 5789999999999999999999999999999864 59999999886543 333
Q ss_pred -----------------CCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 229 -----------------KSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 229 -----------------~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++.++|+++++ ++|..+. .+.|..+.+.|.++|.+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 96 MMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSG---VIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp EECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEE---EECSCCCHHHHHHHHHHHHC
T ss_pred EecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHh
Confidence 78999999999 5555543 78898899999999999865
No 211
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.24 E-value=2.2e-11 Score=95.12 Aligned_cols=95 Identities=14% Similarity=0.207 Sum_probs=66.1
Q ss_pred ChHHHh---hcCCCcEEEEEeCCCCccchhhhHHHHHHHH---HhcCCCcEEEEEEeCCCcc-cccCCCCcCceEEEEe-
Q 021368 169 NFDEIV---LDESKDVLLEIYAPWCGHCQAFEPTYNKLAK---HLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFP- 240 (313)
Q Consensus 169 ~f~~~l---~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~---~~~~~~~v~~~~vd~~~~~-~~~~~v~~~P~i~~~~- 240 (313)
++++.+ ...+++++|+|||+||++|+.+.+.+..... .... ++..+.+|.+... ...+++.++||+++|.
T Consensus 32 ~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~--~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~ 109 (151)
T 3ph9_A 32 TYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN--KFIMLNLMHETTDKNLSPDGQYVPRIMFVDP 109 (151)
T ss_dssp SHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH--TCEEEEESSCCSCGGGCTTCCCSSEEEEECT
T ss_pred CHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc--CeEEEEecCCchhhHhhcCCCCCCEEEEECC
Confidence 444443 3468999999999999999999999886432 2221 3555555522222 2678999999999997
Q ss_pred CCCCCcCceeeccC----------cCHHHHHHHHHhcC
Q 021368 241 AGNKSFDPINVDVD----------RTVVALYKFLKKNA 268 (313)
Q Consensus 241 ~g~~~~~~~~y~g~----------~~~~~l~~fi~~~~ 268 (313)
+|+.+. ++.|. .+...+++.+++.+
T Consensus 110 ~G~~v~---~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 110 SLTVRA---DIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TSCBCT---TCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CCCEEE---EEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 788775 44554 45677877777653
No 212
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.24 E-value=2.9e-11 Score=92.19 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=77.5
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc------------------
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------ 223 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~------------------ 223 (313)
+..++++.+.-... .+++++|+||++||++|+.+.+.+.++...+. ++.++.++++..
T Consensus 10 ~~~~~g~~~~l~~~-~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 10 AKTLDGHDFHGESL-LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp EEBTTSCEEEGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred cccCCCCEeeHHHh-CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 44445555544332 57899999999999999999999999999986 588888887542
Q ss_pred -----cc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 224 -----EH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 224 -----~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
.. ..|++.++|+++++..+..+ . .+.|..+.+.|.++|.+.+.
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i-~--~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNV-D--VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCE-E--EEESCCCHHHHHHHHHHHC-
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCE-E--EEecCCCHHHHHHHHHHHhc
Confidence 11 57899999999999644432 1 68898899999999998763
No 213
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.23 E-value=5.8e-11 Score=83.01 Aligned_cols=81 Identities=16% Similarity=0.124 Sum_probs=70.8
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 129 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~ 129 (313)
..+++||++| ++|+.+.|.|++++.++.+.+.|+.+|+++ ++.+++++||.++ |++++ +|. . .+.|..+
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~--Pt~~~--~G~--~-~~~G~~~ 73 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME---NPQKAMEYGIMAV--PTIVI--NGD--V-EFIGAPT 73 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS---SCCTTTSTTTCCS--SEEEE--TTE--E-ECCSSSS
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC---CHHHHHHCCCccc--CEEEE--CCE--E-eeecCCC
Confidence 4678899999 999999999999999999889999999998 5699999999998 99977 332 2 6788889
Q ss_pred HHHHHHHHHHHh
Q 021368 130 LDKIKTFGEDFL 141 (313)
Q Consensus 130 ~~~i~~fi~~~~ 141 (313)
.+.|.+++++.+
T Consensus 74 ~~~l~~~l~~~l 85 (85)
T 1fo5_A 74 KEALVEAIKKRL 85 (85)
T ss_dssp SHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 214
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.23 E-value=9.2e-12 Score=95.39 Aligned_cols=104 Identities=13% Similarity=0.168 Sum_probs=83.7
Q ss_pred CCceEEeCC-CcccccccCC--CccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 31 LPLVTIFTR-ENAPSVFESP--IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 31 ~~~v~~lt~-~~~~~~~~~~--~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
...+..++. +++..++... ..++|.||++| ++|+.+.|.|.+++.++ .+.|+.||++. +..++++|||.++
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~---~~~l~~~~~v~~~ 93 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDI---HPKLNDQHNIKAL 93 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTT---CHHHHHHTTCCSS
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccc---hHHHHHhcCCCCC
Confidence 345777775 7777766543 47788899999 99999999999999988 59999999998 6699999999999
Q ss_pred CCcEEEEEc--CCCC-ceeccCCCCCHHHHHHHHHHHhc
Q 021368 107 APKVLAYTG--NDDA-KKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 107 ~~P~i~~~~--~~~~-~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+++++. +|.+ ....+.|. +.+.|.+++.+.+.
T Consensus 94 --Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 94 --PTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp --SEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred --CEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9998884 4431 23445676 89999999999865
No 215
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.22 E-value=1.5e-11 Score=92.01 Aligned_cols=99 Identities=10% Similarity=0.008 Sum_probs=79.6
Q ss_pred CceEEeCCCcccccccCCC---ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 32 PLVTIFTRENAPSVFESPI---KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 32 ~~v~~lt~~~~~~~~~~~~---~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
+.+.+++.++|.+.+.... .++|.||++| ++|+.+.|.|+++|.++.+ +.|+.||+++ . ..+|+|++.
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~-v~f~kvd~d~---~---~~~~~v~~~- 74 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE-TKFVKAIVNS---C---IQHYHDNCL- 74 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT-SEEEEEEGGG---T---STTCCGGGC-
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC-CEEEEEEhHH---h---HHHCCCCCC-
Confidence 4578889999988554332 6778899999 9999999999999999987 9999999986 2 488999988
Q ss_pred CcEEEEEcCCCCceeccCC-------CCCHHHHHHHHHHH
Q 021368 108 PKVLAYTGNDDAKKHILDG-------ELTLDKIKTFGEDF 140 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~g-------~~~~~~i~~fi~~~ 140 (313)
||+++|++|... ..+.| ..+.+.|..++.+.
T Consensus 75 -PT~~~fk~G~~v-~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 75 -PTIFVYKNGQIE-AKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp -SEEEEEETTEEE-EEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred -CEEEEEECCEEE-EEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999987632 12222 46899999998774
No 216
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.22 E-value=1.3e-11 Score=95.10 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=84.7
Q ss_pred ceEEe-CCCccccccc----CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 33 LVTIF-TRENAPSVFE----SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 33 ~v~~l-t~~~~~~~~~----~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
.+..+ +.++|.+.+. .+..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++ ++.++++|||.++
T Consensus 25 ~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~-v~~~~v~~~~---~~~~~~~~~v~~~ 100 (139)
T 3d22_A 25 NVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPS-LMFLVIDVDE---LSDFSASWEIKAT 100 (139)
T ss_dssp TCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---SHHHHHHTTCCEE
T ss_pred cEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEeCcc---cHHHHHHcCCCcc
Confidence 34455 4677877653 4667889999999 9999999999999999975 9999999998 6699999999999
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
|+++++.+|. ....+.|. +.+.|.+++.+++.+
T Consensus 101 --Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 101 --PTFFFLRDGQ-QVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp --SEEEEEETTE-EEEEEESC-CHHHHHHHHHHHHHT
T ss_pred --cEEEEEcCCe-EEEEEeCC-CHHHHHHHHHHHhcc
Confidence 9998886554 33455676 899999999999874
No 217
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.21 E-value=5.5e-12 Score=115.29 Aligned_cols=107 Identities=13% Similarity=0.129 Sum_probs=85.3
Q ss_pred CCceEEeCCCcccccccCC--CccEEEEEeeC-CchhhhhHHHHHHHHhcc---C-----eEEEEEEeCCCcccccchhh
Q 021368 31 LPLVTIFTRENAPSVFESP--IKNQLLLFAVS-NDSEKLLPVFEEAAKSFK---G-----KLIFVYVQMDNEDVGKPVSE 99 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~--~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~---~-----~v~f~~vd~~~~~~~~~l~~ 99 (313)
...|..++.++|+.++... .+++|.||++| ++|+.+.|.|.+++.++. + .+.|+.|||+. ++.+|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~---~~~la~ 98 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS---EVDLCR 98 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT---CHHHHH
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC---CHHHHH
Confidence 3468999999999987654 46888999999 999999999999999998 3 59999999998 679999
Q ss_pred hhCCCCCCCcEEEEEcCCC-CceeccCCC------------CCHHHHHHHHHHHhc
Q 021368 100 YFGITGEAPKVLAYTGNDD-AKKHILDGE------------LTLDKIKTFGEDFLE 142 (313)
Q Consensus 100 ~~~v~~~~~P~i~~~~~~~-~~~~~~~g~------------~~~~~i~~fi~~~~~ 142 (313)
+|+|.++ |++++|..++ .....|.|. ++.+++...++.+++
T Consensus 99 ~y~V~~~--PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Lin 152 (470)
T 3qcp_A 99 KYDINFV--PRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVN 152 (470)
T ss_dssp HTTCCSS--CEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHH
T ss_pred HcCCCcc--CeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 9999999 9999886544 234456665 344556666555544
No 218
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.21 E-value=1e-11 Score=93.06 Aligned_cols=103 Identities=18% Similarity=0.240 Sum_probs=81.1
Q ss_pred CceEEe--CCCcccc-cccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCC
Q 021368 32 PLVTIF--TRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 107 (313)
Q Consensus 32 ~~v~~l--t~~~~~~-~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~ 107 (313)
+.+..+ +.++|.+ +...+..++|.||++| ++|+.+.|.|.+++.++ +.+.|+.||++. ++.++++|+|.++
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~---~~~~~~~~~i~~~- 77 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK---NGNAADAYGVSSI- 77 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT---CHHHHHHTTCCSS-
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC---CHHHHHhcCCCCC-
Confidence 445666 5667774 4455678889999999 99999999999999999 569999999998 6699999999998
Q ss_pred CcEEEEEcC----CCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 108 PKVLAYTGN----DDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 108 ~P~i~~~~~----~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|++++++. |. ....+.|.. .++|.+.+.++..
T Consensus 78 -Pt~~~~~~~~~~G~-~~~~~~G~~-~~~l~~~~~~~~~ 113 (118)
T 2f51_A 78 -PALFFVKKEGNEIK-TLDQFVGAD-VSRIKADIEKFKH 113 (118)
T ss_dssp -SEEEEEEEETTEEE-EEEEEESCC-HHHHHHHHHHHC-
T ss_pred -CEEEEEeCCCCcce-EEEeecCCC-HHHHHHHHHHhhh
Confidence 99999876 32 233456654 5569999988753
No 219
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.21 E-value=1.7e-11 Score=93.17 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=86.4
Q ss_pred EEeCCCcccccc----cCCCccEEEEEeeC-CchhhhhHHH---HHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 35 TIFTRENAPSVF----ESPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 35 ~~lt~~~~~~~~----~~~~~~~v~f~~~~-~~c~~~~~~~---~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
..++..+|++.+ ..+..++|.||++| ++|+.+.|.+ ..++..+.+.+.++.||++... +..++++|||.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGE-GVELRKKYGVHAY 87 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTT-HHHHHHHTTCCSS
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcc-hHHHHHHcCCCCC
Confidence 345777787755 25668889999999 9999999999 7788887777999999998533 6789999999998
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
|++++++.++.....+.|..+.+.|.+|+.+.+..
T Consensus 88 --Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 --PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp --CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred --CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 99999954444455678999999999999998763
No 220
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.20 E-value=2.1e-11 Score=83.74 Aligned_cols=74 Identities=19% Similarity=0.298 Sum_probs=60.1
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceEEEEeCCCCCcCceeeccCc-CHHH
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVDR-TVVA 259 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~-~~~~ 259 (313)
..|.||++||++|+.+.+.+.+++..+.. .+.++.+| +.....++++.++|++++ +|+.+ +.|.. +.+.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~-~~~~~~~~~v~~~Pt~~~--~G~~~-----~~G~~~~~~~ 71 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK-EMDQILEAGLTALPGLAV--DGELK-----IMGRVASKEE 71 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC-SHHHHHHHTCSSSSCEEE--TTEEE-----ECSSCCCHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec-CHHHHHHCCCCcCCEEEE--CCEEE-----EcCCCCCHHH
Confidence 46899999999999999999999999875 68899998 222237899999999998 66543 33876 8898
Q ss_pred HHHHH
Q 021368 260 LYKFL 264 (313)
Q Consensus 260 l~~fi 264 (313)
|.+||
T Consensus 72 l~~~l 76 (77)
T 1ilo_A 72 IKKIL 76 (77)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 88876
No 221
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.20 E-value=4.5e-11 Score=93.28 Aligned_cols=89 Identities=18% Similarity=0.341 Sum_probs=74.2
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc------------------------cccCCCCc
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------HHRAKSDG 232 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~------------------------~~~~~v~~ 232 (313)
.+++++|+||++||++|+.+.+.+.++...+... ++.++.++++... ...|++.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ-GVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC
Confidence 4789999999999999999999999999999763 5888888876531 15789999
Q ss_pred CceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 233 FPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 233 ~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+|+++++ ++|..+. .+.|..+.+.|.++|.+.+.
T Consensus 104 ~P~~~lid~~G~i~~---~~~G~~~~~~l~~~l~~ll~ 138 (151)
T 2f9s_A 104 LPTTFLINPEGKVVK---VVTGTMTESMIHDYMNLIKP 138 (151)
T ss_dssp SCEEEEECTTSEEEE---EEESCCCHHHHHHHHHHHSC
T ss_pred CCeEEEECCCCcEEE---EEeCCCCHHHHHHHHHHHHh
Confidence 9999999 5666543 67788899999999999864
No 222
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.19 E-value=4.6e-11 Score=92.15 Aligned_cols=84 Identities=13% Similarity=0.260 Sum_probs=70.8
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-------------------------ccc--ccCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------------------------NEH--HRAK 229 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-------------------------~~~--~~~~ 229 (313)
.+++++|+||++||++|+.+.+.+.++..++... ++.++.++++. +.. ..|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD-SVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS-SEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC-CEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 5789999999999999999999999999999843 68999998864 111 6789
Q ss_pred CCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHH
Q 021368 230 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFL 264 (313)
Q Consensus 230 v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi 264 (313)
+.++|+++++ ++|..+. .+.|..+.+.|.++|
T Consensus 112 v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEK---TKIGPMTAEQLKEWT 144 (145)
T ss_dssp CCEESEEEEECTTCCEEE---EEESCCCHHHHHHHH
T ss_pred cCccCeEEEEcCCCcEEE---EEcCCcCHHHHHHhh
Confidence 9999999999 5666543 788989999999887
No 223
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.19 E-value=4.7e-11 Score=93.25 Aligned_cols=89 Identities=17% Similarity=0.249 Sum_probs=72.9
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc--------------------------cccCC-
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------------HHRAK- 229 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~--------------------------~~~~~- 229 (313)
.+++++|+||++||++|+.+.+.+.++..+++.. ++.++.++++... ...|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG-SVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-TEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 5789999999999999999999999999998653 6999999986311 04567
Q ss_pred -CCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 230 -SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 230 -v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+.++|+++++ ++|..+. .+.|..+.+.|.++|++...
T Consensus 102 ~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQ---TITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp CSCCSSEEEEEETTTTEEE---ECCSCCCHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEECCCCcEEE---EECCCCCHHHHHHHHHHHHH
Confidence 8999999999 4565543 78899999999999988753
No 224
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.19 E-value=9e-11 Score=90.08 Aligned_cols=100 Identities=11% Similarity=0.027 Sum_probs=80.7
Q ss_pred CCceEEeCCCcccccccCC---CccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 31 LPLVTIFTRENAPSVFESP---IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 31 ~~~v~~lt~~~~~~~~~~~---~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
...+.+++.++|...+... ..++|.||++| ++|+.+.|.|.+++.++.+ +.|+.||+++. . ++|+|.++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~-v~~~~vd~~~~---~---~~~~i~~~ 81 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE-TKFVKAIVNSC---I---EHYHDNCL 81 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS-EEEEEECCSSS---C---SSCCSSCC
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-cEEEEEEhhcC---c---ccCCCCCC
Confidence 4567888888888866432 46788899999 9999999999999999975 99999999873 2 78999998
Q ss_pred CCcEEEEEcCCCCceeccCCC-------CCHHHHHHHHHHH
Q 021368 107 APKVLAYTGNDDAKKHILDGE-------LTLDKIKTFGEDF 140 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~-------~~~~~i~~fi~~~ 140 (313)
|++++|.+|... ..+.|. .+.+.|.+++.+.
T Consensus 82 --Pt~~~~~~G~~v-~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 82 --PTIFVYKNGQIE-GKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp --SEEEEESSSSCS-EEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred --CEEEEEECCEEE-EEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 999999876532 233443 3789999999987
No 225
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.18 E-value=3.4e-11 Score=95.22 Aligned_cols=105 Identities=12% Similarity=0.184 Sum_probs=79.9
Q ss_pred CeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC------------------
Q 021368 161 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT------------------ 222 (313)
Q Consensus 161 ~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~------------------ 222 (313)
.+..++++.+.... ..+++++|+||++||++|+.+.+.+.+++.+++.. ++.+..++++.
T Consensus 22 ~l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT-TSEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC-CcEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 45667777666543 35789999999999999999999999999987643 46666565421
Q ss_pred ----------ccc--ccCCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 223 ----------NEH--HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 223 ----------~~~--~~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
+.. ..|++.++|+++++ ++|..+. .+.|..+.+.|.++|.+.+..
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQR---IVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEE---EEESCCCHHHHHHHHHCTTCC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHHH
Confidence 111 46789999999999 5666543 678988999999999988653
No 226
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.18 E-value=4.6e-11 Score=83.55 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=70.7
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 129 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~ 129 (313)
..++.||++| ++|+.+.|.|.+++.++.+.+.|+.+|+++ ++.+++++||.++ |++++ +|. . .+.|..+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~--Pt~~~--~G~--~-~~~G~~~ 72 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMV---DREKAIEYGLMAV--PAIAI--NGV--V-RFVGAPS 72 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTT---CGGGGGGTCSSCS--SEEEE--TTT--E-EEECSSC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCC---CHHHHHhCCceee--CEEEE--CCE--E-EEccCCC
Confidence 3578899999 999999999999999999889999999998 6699999999998 99977 333 2 5678889
Q ss_pred HHHHHHHHHHHh
Q 021368 130 LDKIKTFGEDFL 141 (313)
Q Consensus 130 ~~~i~~fi~~~~ 141 (313)
.+.|.+++.+.+
T Consensus 73 ~~~l~~~l~~~l 84 (85)
T 1nho_A 73 REELFEAINDEM 84 (85)
T ss_dssp CHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 227
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.17 E-value=7.9e-11 Score=91.86 Aligned_cols=90 Identities=16% Similarity=0.349 Sum_probs=74.7
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-----------------------c--ccCCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------H--HRAKSD 231 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~-----------------------~--~~~~v~ 231 (313)
.+++++|+||++||++|+.+.+.+.++...+.+. ++.++.++++... . ..|++.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGK-DIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN 107 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS-SEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC-CeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC
Confidence 4689999999999999999999999999998763 5889999888753 1 468999
Q ss_pred cCceEEEEe-CCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 232 GFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 232 ~~P~i~~~~-~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
++|+++++. +|..+. .+.|..+.+.|.++|++.++.
T Consensus 108 ~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 108 GIPRFILLDRDGKIIS---ANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp SSCCEEEECTTSCEEE---SSCCCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCeEEE---ccCCCCCHHHHHHHHHHHhcc
Confidence 999999996 666543 566778889999999988654
No 228
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.16 E-value=3.5e-11 Score=90.80 Aligned_cols=101 Identities=17% Similarity=0.148 Sum_probs=80.8
Q ss_pred CceEEeCCCcccccccC--CCccEEEEEee-------C-CchhhhhHHHHHHHHhccCeEEEEEEeC-------CCcccc
Q 021368 32 PLVTIFTRENAPSVFES--PIKNQLLLFAV-------S-NDSEKLLPVFEEAAKSFKGKLIFVYVQM-------DNEDVG 94 (313)
Q Consensus 32 ~~v~~lt~~~~~~~~~~--~~~~~v~f~~~-------~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~-------~~~~~~ 94 (313)
..+...+.++|...+.. +.+++|.||++ | ++|+.+.|.|.+++.++.+.+.|+.||+ +. +
T Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~---~ 81 (123)
T 1wou_A 5 EEVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDP---N 81 (123)
T ss_dssp EEEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCT---T
T ss_pred eeEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhch---h
Confidence 34566777788876654 67888899999 9 9999999999999999987899999999 45 6
Q ss_pred cchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHH
Q 021368 95 KPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGED 139 (313)
Q Consensus 95 ~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 139 (313)
+.++++|+|.++ |++++++++. ....+.| .+.+.|.+|+.+
T Consensus 82 ~~~~~~~~i~~~--Pt~~~~~~~~-~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 82 NDFRKNLKVTAV--PTLLKYGTPQ-KLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp CHHHHHHCCCSS--SEEEETTSSC-EEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHHHCCCCee--CEEEEEcCCc-eEecccc-CCHHHHHHHHhc
Confidence 689999999999 9999997743 2222233 577888888864
No 229
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.16 E-value=1.1e-10 Score=90.01 Aligned_cols=86 Identities=17% Similarity=0.367 Sum_probs=68.1
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHH---HHHHhcCCCcEEEEEEeCCCccc--------------------------cc
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNK---LAKHLRGVDSIVIAKMDGTTNEH--------------------------HR 227 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~---la~~~~~~~~v~~~~vd~~~~~~--------------------------~~ 227 (313)
.+++++|+||++||++|+.+.+.+.+ +...+++. ++.+..++++.... ..
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG-TLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT-SEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC-CeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 47899999999999999999999988 88888653 58888888875432 27
Q ss_pred CCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 228 AKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 228 ~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
|++.++|+++++.....+ .+ +..+.+.|.++|.+..
T Consensus 105 ~~v~~~P~~~lid~~G~i----~~-~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKRV----IL-KDTSMEQLIDYLATQA 140 (142)
T ss_dssp SCCCSSSEEEEECTTCBE----EE-CSCCHHHHHHHHHC--
T ss_pred cCCCCCCeEEEECCCCCE----Ee-cCCCHHHHHHHHHHHc
Confidence 899999999999544442 33 5578999999998764
No 230
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.16 E-value=1.3e-10 Score=94.11 Aligned_cols=137 Identities=15% Similarity=0.236 Sum_probs=93.4
Q ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhc
Q 021368 129 TLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLR 208 (313)
Q Consensus 129 ~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~ 208 (313)
....+.+|+..+..|.+...........-++..+..++++.+.-.- -.+++++|+||++||++|..+.+.+.++..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~f~l~~~~G~~~~l~~-~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~ 90 (186)
T 1jfu_A 12 AAVATAQKIAPLAHGEVAALTMASAPLKLPDLAFEDADGKPKKLSD-FRGKTLLVNLWATWCVPCRKEMPALDELQGKLS 90 (186)
T ss_dssp HHHHHHHHHGGGCCGGGTTCEECCSCCBCCCCEEECTTSCEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhhcchhhcchhhhhccccCCCcCCCcEeEcCCCCEeeHHH-cCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc
Confidence 4567788888888877765544333222223333344444332211 147899999999999999999999999999997
Q ss_pred CCCcEEEEEEeCCCcc--c-----ccCCCC-----------------------cCceEEEE-eCCCCCcCceeeccCc--
Q 021368 209 GVDSIVIAKMDGTTNE--H-----HRAKSD-----------------------GFPTILFF-PAGNKSFDPINVDVDR-- 255 (313)
Q Consensus 209 ~~~~v~~~~vd~~~~~--~-----~~~~v~-----------------------~~P~i~~~-~~g~~~~~~~~y~g~~-- 255 (313)
.. ++.++.|+++... . .++++. ++|+++++ ++|+.+. .+.|..
T Consensus 91 ~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~---~~~g~~~~ 166 (186)
T 1jfu_A 91 GP-NFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIA---TIAGPAEW 166 (186)
T ss_dssp BT-TEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEE---EEESCCCT
T ss_pred cC-CcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEE---EEecCCcc
Confidence 43 6888888887641 1 334442 89999999 5565543 677754
Q ss_pred CHHHHHHHHHhcCCC
Q 021368 256 TVVALYKFLKKNASI 270 (313)
Q Consensus 256 ~~~~l~~fi~~~~~~ 270 (313)
+.+.|.++|.+.+..
T Consensus 167 ~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 167 ASEDALKLIRAATGK 181 (186)
T ss_dssp TSHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHhcc
Confidence 478899999988654
No 231
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.16 E-value=2.1e-11 Score=96.94 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=59.1
Q ss_pred cCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCC---CCcCceEEEEe
Q 021368 166 VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAK---SDGFPTILFFP 240 (313)
Q Consensus 166 ~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~---v~~~P~i~~~~ 240 (313)
+.+.+..+..-.+++++|.||++||++|+.+.|.+.+++..+. ++.+..+|.+.+.. ..|. +.++||+++|.
T Consensus 42 ~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 42 PSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 3334443322246789999999999999999999999998764 58899998877654 5665 99999999998
Q ss_pred CCCC
Q 021368 241 AGNK 244 (313)
Q Consensus 241 ~g~~ 244 (313)
+|..
T Consensus 119 ~~G~ 122 (167)
T 1z6n_A 119 EEFN 122 (167)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 8643
No 232
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.15 E-value=7.8e-11 Score=92.14 Aligned_cols=85 Identities=19% Similarity=0.234 Sum_probs=70.2
Q ss_pred CcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC---------------------------Cccc--ccCC
Q 021368 179 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT---------------------------TNEH--HRAK 229 (313)
Q Consensus 179 k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~---------------------------~~~~--~~~~ 229 (313)
++++|+||++||++|+.+.+.+.++..++ ++.++.++++ .... ..|+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC
Confidence 89999999999999999999999999999 3677777771 1111 6789
Q ss_pred CCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCCC
Q 021368 230 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASI 270 (313)
Q Consensus 230 v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 270 (313)
+.++|+++++ ++|..+. .+.|..+.+.|.++|++++..
T Consensus 107 v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 107 VLGQPWTFVVDREGKVVA---LFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp BCSSCEEEEECTTSEEEE---EEESBCCHHHHHHHHHHTTCC
T ss_pred CCcccEEEEECCCCCEEE---EEcCCCCHHHHHHHHHhccCc
Confidence 9999998888 5666543 788888999999999999754
No 233
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.15 E-value=1.8e-10 Score=89.87 Aligned_cols=89 Identities=15% Similarity=0.226 Sum_probs=72.2
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-----------------------ccc--ccCCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------NEH--HRAKSD 231 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-----------------------~~~--~~~~v~ 231 (313)
.+++++|+||++||++|+.+.+.+.+++..+... ++.+..++.+. +.. ..|++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 105 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK-NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQ 105 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCC
Confidence 5789999999999999999999999999999864 57777666431 111 567999
Q ss_pred cCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 232 GFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 232 ~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++|+++++ ++|..+. .|.|..+.+.|.++|.+.+.
T Consensus 106 ~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 106 VYPTSVLIGKKGEILK---TYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp SSSEEEEECSSSCCCE---EEESSCCHHHHHHHHHHHHH
T ss_pred ccCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHH
Confidence 99999999 5666543 78898899999999998854
No 234
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.13 E-value=2.6e-10 Score=88.24 Aligned_cols=86 Identities=17% Similarity=0.276 Sum_probs=69.1
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHh-cCCCcEEEEEEeCCCcc-------------------------c--ccC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHL-RGVDSIVIAKMDGTTNE-------------------------H--HRA 228 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~-~~~~~v~~~~vd~~~~~-------------------------~--~~~ 228 (313)
.+++++|+||++||++|+.+.+.+.++..++ .. .++.++.++++... . ..|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN-KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC-TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 5789999999999999999999999999999 54 35889989887643 1 678
Q ss_pred CCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 229 KSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 229 ~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++.++|+++++ ++|..+ +... +.+.|.++|.+.+.
T Consensus 111 ~v~~~P~~~lid~~G~i~-----~~~~-~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 111 AILTLPTNILLSPTGKIL-----ARDI-QGEALTGKLKELLK 146 (148)
T ss_dssp TCCSSSEEEEECTTSBEE-----EESC-CHHHHHHHHHHHC-
T ss_pred CCCCcCEEEEECCCCeEE-----EecC-CHHHHHHHHHHHHc
Confidence 99999999999 455543 2222 88889999988764
No 235
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.13 E-value=1.4e-10 Score=88.27 Aligned_cols=86 Identities=22% Similarity=0.303 Sum_probs=69.5
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC----------------------------c--ccc
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT----------------------------N--EHH 226 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~----------------------------~--~~~ 226 (313)
.+++++|+||++||++|+.+.+.+.++..++.. ++.+..+++.. + ...
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLE 98 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHH
Confidence 578999999999999999999999999998654 68888885422 1 115
Q ss_pred cCCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 227 RAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 227 ~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
.|++.++|+++++ ++|..+. .+.|..+.+.|.++|++.
T Consensus 99 ~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 99 TYGVRSYPTQAFIDKEGKLVK---THPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCSSSEEEEECTTCCEEE---EEESCCCHHHHHHHHHHC
T ss_pred HcCcccCCeEEEECCCCcEEE---eecCCCcHHHHHHHHHhh
Confidence 7899999999999 5666543 788988999999999764
No 236
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.13 E-value=1.9e-10 Score=90.51 Aligned_cols=89 Identities=16% Similarity=0.217 Sum_probs=72.6
Q ss_pred CCCcEEEEEeCCCCccchh-hhHHHHHHHHHhcCCCcEEEEEEeCC----------------------------C--c--
Q 021368 177 ESKDVLLEIYAPWCGHCQA-FEPTYNKLAKHLRGVDSIVIAKMDGT----------------------------T--N-- 223 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~-~~~~~~~la~~~~~~~~v~~~~vd~~----------------------------~--~-- 223 (313)
.+++++|+||++||++|+. +.+.+.++..++++. ++.++.++++ . .
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccc
Confidence 4789999999999999999 699999999999864 5888888763 1 1
Q ss_pred ----ccccCCCCcCceEEEEe-CCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 224 ----EHHRAKSDGFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 224 ----~~~~~~v~~~P~i~~~~-~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
....|++.++|+++++. +|..+. .+.|..+.+.|.++|.+.+.
T Consensus 108 ~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 108 RIPSTMKKYRLEGTPSIILADRKGRIRQ---VQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSBEEE---EEESCCCHHHHHHHHHHHHT
T ss_pred hhhhHHHhcccCccceEEEECCCCcEEE---EecCcCCHHHHHHHHHHHHh
Confidence 12468899999999995 565543 77898899999999998864
No 237
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.12 E-value=1.6e-10 Score=90.72 Aligned_cols=89 Identities=15% Similarity=0.188 Sum_probs=72.5
Q ss_pred CCCcEEEEEeCCCCccchhh-hHHHHHHHHHhcCCCcEEEEEEeCCC----------------------------c----
Q 021368 177 ESKDVLLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGTT----------------------------N---- 223 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~-~~~~~~la~~~~~~~~v~~~~vd~~~----------------------------~---- 223 (313)
.+++++|+||++||++|+.. ++.+.++..++++. ++.++.++++. .
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED-KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC-CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 47899999999999999996 99999999999854 58888887631 1
Q ss_pred ---ccccCCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 224 ---EHHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 224 ---~~~~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
....|++.++|+++++ ++|..+. .+.|..+.+.|.++|.+.+.
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDLRA---HHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEEEE---EEESCCCHHHHHHHHHHHHT
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCEEE---EEeCCCCHHHHHHHHHHHhc
Confidence 1146899999999999 4565543 77888899999999998864
No 238
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.12 E-value=7.9e-11 Score=89.92 Aligned_cols=93 Identities=15% Similarity=0.142 Sum_probs=76.0
Q ss_pred cCCCccEEEEEeeC-CchhhhhHHHH--HHHHhccCeEEEEEEeCCCcccccchhhhhCC---CCCCCcEEEEEcCCCCc
Q 021368 47 ESPIKNQLLLFAVS-NDSEKLLPVFE--EAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGI---TGEAPKVLAYTGNDDAK 120 (313)
Q Consensus 47 ~~~~~~~v~f~~~~-~~c~~~~~~~~--~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v---~~~~~P~i~~~~~~~~~ 120 (313)
..+.+++|.||++| ++|+.+.|.|. +++..+.+.+.|+.||++..+.++.++++||| .++ |++++++.++..
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~--Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGI--PAVVVVNSDGKV 104 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCS--SEEEEECTTSCE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCcc--ceEEEECCCCCE
Confidence 34668889999999 99999999999 99999987899999999332227799999999 988 999999554444
Q ss_pred eeccCC-------CCCHHHHHHHHHHHh
Q 021368 121 KHILDG-------ELTLDKIKTFGEDFL 141 (313)
Q Consensus 121 ~~~~~g-------~~~~~~i~~fi~~~~ 141 (313)
...+.| ..+.+.+.+|+.++.
T Consensus 105 ~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 105 RYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEEecCCcccccccCCHHHHHHHHHHhc
Confidence 455556 578999999998763
No 239
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.11 E-value=2.2e-11 Score=92.50 Aligned_cols=104 Identities=17% Similarity=0.234 Sum_probs=84.5
Q ss_pred CceEEe-CCCccccccc----CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCC
Q 021368 32 PLVTIF-TRENAPSVFE----SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 32 ~~v~~l-t~~~~~~~~~----~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
+.+..+ +.++|+..+. .+...+|+||++| ++|+.+.|.|.+++.++.+ +.|+.||++. ++.++++|+|.+
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-v~~~~v~~~~---~~~~~~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPG-AVFLKVDVDE---LKEVAEKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTT-BCCEECCTTT---SGGGHHHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC-CEEEEEeccc---hHHHHHHcCCCc
Confidence 345566 4466776554 3668899999999 9999999999999999985 9999999998 669999999999
Q ss_pred CCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 106 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
+ |+++++.+|. ....+.| .+.+.|.+++.+++..
T Consensus 90 ~--Pt~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 90 M--PTFLFIKDGA-EADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp S--CCCCBCTTTT-CCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred c--ceEEEEeCCe-EEEEEeC-CCHHHHHHHHHHHHhc
Confidence 9 9998886654 2344567 6889999999998763
No 240
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.11 E-value=2.7e-10 Score=88.74 Aligned_cols=89 Identities=17% Similarity=0.294 Sum_probs=72.7
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------------------------ccCCCCc
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------HRAKSDG 232 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------------------------~~~~v~~ 232 (313)
.+++++|+||++||++|+.+.+.+.++..++... ++.++.++++.... ..|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK-GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC-CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 4789999999999999999999999999999874 48888888886531 4589999
Q ss_pred CceEEEE-eCCCCCcCceeecc--CcCHHHHHHHHHhcCC
Q 021368 233 FPTILFF-PAGNKSFDPINVDV--DRTVVALYKFLKKNAS 269 (313)
Q Consensus 233 ~P~i~~~-~~g~~~~~~~~y~g--~~~~~~l~~fi~~~~~ 269 (313)
+|+++++ ++|..+. .+.| ..+.+.|.++|.+.+.
T Consensus 106 ~P~~~lid~~G~i~~---~~~g~~~~~~~~l~~~i~~~~~ 142 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLL---QHVGFRPADKEALEQQILAALG 142 (152)
T ss_dssp SSEEEEECTTSBEEE---EEESCCTTTHHHHHHHHHHHTC
T ss_pred CCeEEEECCCCCEEE---EEccCCCcCHHHHHHHHHHHHc
Confidence 9999999 5565543 5666 3467899999999865
No 241
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.10 E-value=3.9e-10 Score=87.01 Aligned_cols=84 Identities=12% Similarity=0.187 Sum_probs=66.6
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHH---HHHHhcCCCcEEEEEEeCCCcc--------------------------ccc
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNK---LAKHLRGVDSIVIAKMDGTTNE--------------------------HHR 227 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~---la~~~~~~~~v~~~~vd~~~~~--------------------------~~~ 227 (313)
.+++++|+||++||++|+.+++.+.+ +..++++. ++.+..++.+... ...
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~-~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK-KLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNL 108 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT-SEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC-CeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhh
Confidence 36899999999999999999999999 99999763 6888888887651 246
Q ss_pred CCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHh
Q 021368 228 AKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 266 (313)
Q Consensus 228 ~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~ 266 (313)
|++.++|+++++.....+ .+.+ .+.+.|.+||++
T Consensus 109 ~~v~~~P~~~lid~~G~i----~~~~-~~~~~l~~~l~e 142 (142)
T 3eur_A 109 YDLRAIPTLYLLDKNKTV----LLKD-ATLQKVEQYLAE 142 (142)
T ss_dssp SCCTTCSEEEEECTTCBE----EEEE-ECHHHHHHHHHC
T ss_pred cCCCcCCeEEEECCCCcE----EecC-CCHHHHHHHHhC
Confidence 789999999999654443 3333 357888888863
No 242
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.09 E-value=2.1e-10 Score=97.00 Aligned_cols=124 Identities=10% Similarity=-0.019 Sum_probs=92.9
Q ss_pred ccccCCCCCCHHHHHHHHHhcC--CCceEEeCCCccccccc-CCCccEEEEEeeC-CchhhhhHHHHHHHHhcc----Ce
Q 021368 9 ISYFADGKFDKSTIADFVFSNK--LPLVTIFTRENAPSVFE-SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK----GK 80 (313)
Q Consensus 9 ~~~y~~g~~~~~~l~~fi~~~~--~~~v~~lt~~~~~~~~~-~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~----~~ 80 (313)
...| .|.....++..|+.... ...-..++.+.++.+.. .+..+++.||++| ++|+.+.|.|.+++..+. +.
T Consensus 96 ~~~~-~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~ 174 (243)
T 2hls_A 96 EVRW-TGIPAGEEIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPV 174 (243)
T ss_dssp TEEE-ESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ceeE-cCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCc
Confidence 6678 88777777888776431 11112344444444332 2335577799999 999999999999999983 45
Q ss_pred EEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 81 LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 81 v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
+.+..||++. ++.++++|||.++ |++++ +|. ..+.|.++.+.|.+|+.+.++.
T Consensus 175 v~~~~vd~~~---~~~~~~~~~V~~v--Pt~~i--~G~---~~~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 175 ILSEAVEAYE---NPDIADKYGVMSV--PSIAI--NGY---LVFVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp EEEEEEETTT---CHHHHHHTTCCSS--SEEEE--TTE---EEEESCCCHHHHHHHHHHHHTT
T ss_pred EEEEEEECcc---CHHHHHHcCCeee--CeEEE--CCE---EEEeCCCCHHHHHHHHHHHhhc
Confidence 9999999998 6699999999999 99866 332 2478999999999999998863
No 243
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.08 E-value=1.1e-10 Score=89.46 Aligned_cols=100 Identities=7% Similarity=0.072 Sum_probs=79.2
Q ss_pred CCccccccc--CCCccEEEEEeeC-CchhhhhHHH---HHHHHhccCeEEEEEEeCCCc-ccccchhhhhCCCCCCCcEE
Q 021368 39 RENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNE-DVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 39 ~~~~~~~~~--~~~~~~v~f~~~~-~~c~~~~~~~---~~~a~~~~~~v~f~~vd~~~~-~~~~~l~~~~~v~~~~~P~i 111 (313)
.+++...+. .+..++|.||++| ++|+.+.+.+ .+++..+.+ +.|+.||++.. +.+..++++|||.++ |++
T Consensus 19 ~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~~--Pt~ 95 (134)
T 2fwh_A 19 VDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLGL--PTI 95 (134)
T ss_dssp HHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCSS--SEE
T ss_pred HHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCCC--CEE
Confidence 344554443 2568888999999 9999999999 999999987 99999999652 116789999999998 999
Q ss_pred EEEcCCCCce--eccCCCCCHHHHHHHHHHHh
Q 021368 112 AYTGNDDAKK--HILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 112 ~~~~~~~~~~--~~~~g~~~~~~i~~fi~~~~ 141 (313)
++++.++... ..+.|..+.+.|.+++.+.-
T Consensus 96 ~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 96 LFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp EEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred EEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 9995443222 56889999999999998864
No 244
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.08 E-value=1.5e-10 Score=89.63 Aligned_cols=88 Identities=14% Similarity=0.114 Sum_probs=71.5
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc--------------------------c-ccCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------------H-HRAK 229 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~--------------------------~-~~~~ 229 (313)
.+++++|+||++||++|+.+.+.+.++...+.+. ++.++.++++... . ..|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 5789999999999999999999999999999874 5899999888543 2 4578
Q ss_pred CCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 230 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 230 v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+.++|+++++ ++|..+. .+.|..+.+.+++.+.+.+
T Consensus 109 i~~~P~~~lid~~G~i~~---~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIA---KRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CCSSCEEEEECTTCBEEE---ESCCGGGHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEE---ecCCHHHHHHHHHHHHHHh
Confidence 8999999999 5666543 6677777788887776653
No 245
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.07 E-value=3.7e-10 Score=88.16 Aligned_cols=88 Identities=16% Similarity=0.272 Sum_probs=70.5
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc-------------------------ccccCCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------------------------EHHRAKSD 231 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~-------------------------~~~~~~v~ 231 (313)
.+++++|+||++||++|+.+.+.+.++...+... ++.++.++++.. ....|++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK-PFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC
Confidence 5789999999999999999999999999999764 588888888875 11467999
Q ss_pred cCceEEEE-eCCCCCcCceeeccC--cCHHHHHHHHHhcC
Q 021368 232 GFPTILFF-PAGNKSFDPINVDVD--RTVVALYKFLKKNA 268 (313)
Q Consensus 232 ~~P~i~~~-~~g~~~~~~~~y~g~--~~~~~l~~fi~~~~ 268 (313)
++|+++++ ++|..+. .+.|. .+.+.+.++|++..
T Consensus 106 ~~P~~~lid~~G~i~~---~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 106 GVPETFVIDRHGVILK---KVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp SBCEEEEECTTSBEEE---EEESCCCTTSHHHHHHHHTC-
T ss_pred CCCeEEEECCCCcEEE---EEcCCCccccHHHHHHHHHHH
Confidence 99988777 4555543 56675 36789999998874
No 246
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.06 E-value=5.4e-10 Score=87.85 Aligned_cols=89 Identities=19% Similarity=0.371 Sum_probs=71.5
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-------------------ccc--ccCCCCcCce
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------------------NEH--HRAKSDGFPT 235 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-------------------~~~--~~~~v~~~P~ 235 (313)
.+++++|+||++||++|+.+.+.+.++..++... ++.++.++++. +.. ..|++.++|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG-DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT-SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC-CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 4689999999999999999999999999999853 68999999876 112 6789999999
Q ss_pred EEEE-eCCCCCcCceeecc--CcCHHHHHHHHHhcCC
Q 021368 236 ILFF-PAGNKSFDPINVDV--DRTVVALYKFLKKNAS 269 (313)
Q Consensus 236 i~~~-~~g~~~~~~~~y~g--~~~~~~l~~fi~~~~~ 269 (313)
++++ ++|..+. .+.| ..+..++++.+.++.+
T Consensus 119 ~~lid~~G~i~~---~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 119 TFIVDRKGIIRQ---RVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp EEEECTTSBEEE---EEESCCCTTSHHHHHHHHTTC-
T ss_pred EEEEcCCCCEEE---EEeCCCccchHHHHHHHHhhcc
Confidence 8888 5555443 6777 4567888888887754
No 247
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.63 E-value=1.7e-11 Score=93.27 Aligned_cols=102 Identities=8% Similarity=0.073 Sum_probs=82.2
Q ss_pred CcccccccCCCccEEEEEeeC-CchhhhhHHH---HHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEc
Q 021368 40 ENAPSVFESPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTG 115 (313)
Q Consensus 40 ~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~---~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~ 115 (313)
+.+......+...+|.||++| ++|+.+.|.+ .+++..+.+.+.|+.||++... +..++++|+|.++ |++++++
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~v~~~--Pt~~~~d 86 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPE-GQELARRYRVPGT--PTFVFLV 86 (130)
Confidence 344444556667888999999 9999999999 9999999888999999996543 6799999999999 9999985
Q ss_pred CC-CCc--eeccCCCCCHHHHHHHHHHHhcCC
Q 021368 116 ND-DAK--KHILDGELTLDKIKTFGEDFLEGK 144 (313)
Q Consensus 116 ~~-~~~--~~~~~g~~~~~~i~~fi~~~~~~~ 144 (313)
.. +.. ...+.|..+.+.|.+++.+.+++.
T Consensus 87 ~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 87 PKAGAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 32 222 345788899999999999987643
No 248
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.05 E-value=1.2e-10 Score=84.95 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=63.7
Q ss_pred cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCH
Q 021368 180 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTV 257 (313)
Q Consensus 180 ~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~ 257 (313)
..+++||++||++|+.+.+.+.+++..+. +.+..+|++.++. .+|++. +|++++|.+|.. .+.|..+.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~----i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~-----v~~g~~~~ 99 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW----FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKE-----LCHYFLDS 99 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC----CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEE-----EECSSCCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC----CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEE-----EEecCCCH
Confidence 57999999999999999999999998763 7788899987765 678986 999999988775 34577888
Q ss_pred HHHHHHH
Q 021368 258 VALYKFL 264 (313)
Q Consensus 258 ~~l~~fi 264 (313)
+.|.+||
T Consensus 100 ~~L~~~L 106 (107)
T 2fgx_A 100 DVIGAYL 106 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8899887
No 249
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.05 E-value=7.6e-10 Score=87.58 Aligned_cols=86 Identities=15% Similarity=0.237 Sum_probs=69.4
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC------------------Ccc--------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT------------------TNE-------------- 224 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~------------------~~~-------------- 224 (313)
.+++++|+||++||++|+.+.+.+.++..++. ++.++.++++ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPS 112 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCC
Confidence 56899999999999999999999999999987 5888889887 221
Q ss_pred ----------cccCCCCcCceEEEEeCCCCCcCceeeccCc-CHHHHHHHHHhcCC
Q 021368 225 ----------HHRAKSDGFPTILFFPAGNKSFDPINVDVDR-TVVALYKFLKKNAS 269 (313)
Q Consensus 225 ----------~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~-~~~~l~~fi~~~~~ 269 (313)
...|++.++|+++++..+..+ .+.|.. +.+.|.++|++.++
T Consensus 113 ~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i----~~~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 113 WIMVMDDGSLVEKFNVRSIDYIVIMDKSSNV----LYAGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp SEEEECCSHHHHHTTCCSSSEEEEEETTCCE----EEEEESCCHHHHHHHHHHC--
T ss_pred eeEEeChHHHHHHhCCCCceEEEEEcCCCcE----EEeCCCCCHHHHHHHHHHHhc
Confidence 156889999999999554443 337777 89999999988753
No 250
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.04 E-value=2.1e-11 Score=99.78 Aligned_cols=115 Identities=15% Similarity=0.273 Sum_probs=78.0
Q ss_pred cchhhhhCCCCCCCcEEEEEcCCCCceeccC-CCCCHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCeEEEcCcChHHH
Q 021368 95 KPVSEYFGITGEAPKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEI 173 (313)
Q Consensus 95 ~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~-g~~~~~~i~~fi~~~~~~~~~~~~~s~~~~~~~~~~v~~l~~~~f~~~ 173 (313)
....+.+||++. |++++ ++ ++... +..+.+++..|+.+++. +.+++.+++.|..... ...+.++..+
T Consensus 40 ~~~a~~~gi~gv--P~fvi--ng---k~~~~~~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~---~~~g~~y~~l 107 (197)
T 1un2_A 40 EKAAADVQLRGV--PAMFV--NG---KYQLNPQGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ---YEDGKQYTTL 107 (197)
T ss_dssp HHHHHHTTCCSS--SEEEE--TT---TEEECGGGSCCSSHHHHHHHHHH--HHHHHTC------------CCBTTTEEEC
T ss_pred HHHHHHcCCCcC--CEEEE--cc---eEecCccccccccHHHHHHHHHH--HHHHHHhCcccccccc---cCCCCCceEc
Confidence 356788999998 99855 22 22222 33566678888887776 6667777777665322 2355666654
Q ss_pred hh-cCCCcEEEEEeCCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCCc
Q 021368 174 VL-DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN 223 (313)
Q Consensus 174 l~-~~~k~~lv~fy~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~~ 223 (313)
.. ...++++|.||+.||++|+.+.|.+ .+++..+.+ ++.|..+++..+
T Consensus 108 ~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~ 159 (197)
T 1un2_A 108 EKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFM 159 (197)
T ss_dssp SSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSS
T ss_pred cCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcC
Confidence 32 3467899999999999999999998 999888865 689999998754
No 251
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.04 E-value=8.6e-11 Score=97.59 Aligned_cols=102 Identities=11% Similarity=0.095 Sum_probs=82.5
Q ss_pred CCceEEe-CCCcccccccCC---CccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCC
Q 021368 31 LPLVTIF-TRENAPSVFESP---IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 31 ~~~v~~l-t~~~~~~~~~~~---~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
...|.++ +.++|...+... ..++|.||++| ++|+.+.|.|.++|.++.+ +.|+.||++ ++.++..|+|.+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~-v~f~~vd~~----~~~l~~~~~i~~ 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPM-VKFCKIRAS----NTGAGDRFSSDV 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTT-SEEEEEEHH----HHTCSTTSCGGG
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCC-eEEEEEECC----cHHHHHHCCCCC
Confidence 3467888 888888877433 57888899999 9999999999999999975 999999997 347999999999
Q ss_pred CCCcEEEEEcCCCCceeccCCCCC-------HHHHHHHHHHH
Q 021368 106 EAPKVLAYTGNDDAKKHILDGELT-------LDKIKTFGEDF 140 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~~-------~~~i~~fi~~~ 140 (313)
+ |++++|.+|. ....+.|..+ .+.|..|+.++
T Consensus 173 ~--PTl~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 L--PTLLVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp C--SEEEEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred C--CEEEEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 9 9999998664 2334555444 58999999875
No 252
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.03 E-value=3.8e-10 Score=91.04 Aligned_cols=88 Identities=11% Similarity=0.221 Sum_probs=70.2
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcE------EEEEEeCCC-ccc--ccC-------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSI------VIAKMDGTT-NEH--HRA------------------- 228 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v------~~~~vd~~~-~~~--~~~------------------- 228 (313)
.+++++|+||++||++|+.+.+.+.++..+++.. ++ .|+.++++. ... ..|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA-GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC-C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc-CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 4689999999999999999999999999998764 35 899999887 222 222
Q ss_pred ------CCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 229 ------KSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 229 ------~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++..+|+++++ ++|..+. .+.|..+.+.|.++|.+.+
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAA---VFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEE---EECSCCCHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHH
Confidence 57899987777 5566543 6888889999999998865
No 253
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.03 E-value=2.1e-10 Score=91.10 Aligned_cols=100 Identities=21% Similarity=0.310 Sum_probs=70.8
Q ss_pred CeEEE--cCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC----------------
Q 021368 161 DVKIV--VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------- 222 (313)
Q Consensus 161 ~v~~l--~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~---------------- 222 (313)
.+..+ +++.+.......+++++|+||++||++|+.+.+.+.+++.. ++.++.++++.
T Consensus 32 ~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~ 106 (168)
T 2b1k_A 32 RLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPY 106 (168)
T ss_dssp EEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCC
T ss_pred EeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCC
Confidence 34455 45555433334688999999999999999999999998875 35555555332
Q ss_pred -------cc--cccCCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 223 -------NE--HHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 223 -------~~--~~~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+. ...|++.++|+++++ ++|..+. .+.|..+.+.|.++|.+.+
T Consensus 107 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 107 ALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRY---RHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp SEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEE---EEESCCCHHHHHHTTHHHH
T ss_pred ceeeECcchHHHHHcCccccCEEEEECCCCeEEE---EEeCCCCHHHHHHHHHHHH
Confidence 11 146799999976666 5565543 6778888888888887764
No 254
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.03 E-value=1.9e-10 Score=80.98 Aligned_cols=73 Identities=11% Similarity=0.022 Sum_probs=59.0
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHH
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVA 259 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~ 259 (313)
+++||++||++|+.+.+.+.+++..+ +..+|++.++. .+|++. +|++++ .+|..+ . |..+.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v-----~-g~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESAYGLR-VPVLRD-PMGREL-----D-WPFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEE-----E-SCCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEE-----e-CCCCHHH
Confidence 78999999999999999998875321 57899998766 678997 999998 666653 2 7789999
Q ss_pred HHHHHHhcCC
Q 021368 260 LYKFLKKNAS 269 (313)
Q Consensus 260 l~~fi~~~~~ 269 (313)
|.+||.+.+.
T Consensus 68 L~~~l~~~~~ 77 (87)
T 1ttz_A 68 LRAWLDAAPH 77 (87)
T ss_dssp HHHHHHTCC-
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 255
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.02 E-value=9.3e-10 Score=85.87 Aligned_cols=86 Identities=20% Similarity=0.301 Sum_probs=67.3
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc-------------------------cc--ccCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------------------------EH--HRAK 229 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~-------------------------~~--~~~~ 229 (313)
.+++++|+||++||++|+.+.+.+.++..++.+. ++.++.++++.. .. ..|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT-TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 4789999999999999999999999999999864 589999998862 11 5789
Q ss_pred CCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 230 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 230 v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
+.++|+++++ ++|..+. .+ .+.+.|.++|++.+.
T Consensus 107 v~~~P~~~lid~~G~i~~---~~---~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVA---KE---LRGDDLYNTVEKFVN 141 (152)
T ss_dssp CCSSCEEEEECTTSEEEE---EC---CCTTHHHHHHHHHHT
T ss_pred CCcCCeEEEECCCCeEEE---ee---CCHHHHHHHHHHHHh
Confidence 9999999999 5565532 22 234567777777654
No 256
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.99 E-value=3.9e-10 Score=94.99 Aligned_cols=102 Identities=11% Similarity=0.106 Sum_probs=82.5
Q ss_pred CCceEEe-CCCccccccc---CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCC
Q 021368 31 LPLVTIF-TRENAPSVFE---SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 105 (313)
Q Consensus 31 ~~~v~~l-t~~~~~~~~~---~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~ 105 (313)
...|.++ +.++|...+. .+..++|.||++| ++|+.+.|.|.++|.+|.+ +.|+.||++. +.++..|+|.+
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~----~~l~~~~~I~~ 185 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN----TGAGDRFSSDV 185 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH----HCCTTSSCTTT
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc----HHHHHHCCCCC
Confidence 3467888 6788888774 3567788899999 9999999999999999988 9999999975 36899999999
Q ss_pred CCCcEEEEEcCCCCceeccCC-------CCCHHHHHHHHHHH
Q 021368 106 EAPKVLAYTGNDDAKKHILDG-------ELTLDKIKTFGEDF 140 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g-------~~~~~~i~~fi~~~ 140 (313)
+ ||+++|.+|... ..+.| .++.+.|..|+.+.
T Consensus 186 ~--PTll~~~~G~~v-~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 186 L--PTLLVYKGGELL-SNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp C--SEEEEEETTEEE-EEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred C--CEEEEEECCEEE-EEEeCCcccccccccHHHHHHHHHHc
Confidence 9 999999866521 22222 25788999999886
No 257
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.99 E-value=4.3e-10 Score=89.60 Aligned_cols=76 Identities=18% Similarity=0.330 Sum_probs=59.2
Q ss_pred CcChHHHhhcCCCcEEEEEeCCCCccchhhhHH-H--HHHHHHhcCCCcEEEEEEeCCCccc--ccC--------CCCcC
Q 021368 167 GNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPT-Y--NKLAKHLRGVDSIVIAKMDGTTNEH--HRA--------KSDGF 233 (313)
Q Consensus 167 ~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~-~--~~la~~~~~~~~v~~~~vd~~~~~~--~~~--------~v~~~ 233 (313)
.+.|.... ..+++++|.||++||++|+.|.+. | .+++..+.. ++.++.+|.+.... ..| ++.++
T Consensus 29 ~ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~ 105 (173)
T 3ira_A 29 EEAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMTVCQIILGRGGW 105 (173)
T ss_dssp HHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHHHHHHHcCCCCC
Confidence 35555544 568999999999999999999983 3 467777755 68999999987654 455 89999
Q ss_pred ceEEEEe-CCCCC
Q 021368 234 PTILFFP-AGNKS 245 (313)
Q Consensus 234 P~i~~~~-~g~~~ 245 (313)
|++++|. +|+.+
T Consensus 106 Pt~v~l~~dG~~v 118 (173)
T 3ira_A 106 PLNIIMTPGKKPF 118 (173)
T ss_dssp SEEEEECTTSCEE
T ss_pred cceeeECCCCCce
Confidence 9999996 66653
No 258
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.99 E-value=6.2e-10 Score=98.91 Aligned_cols=88 Identities=11% Similarity=0.149 Sum_probs=72.2
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc-----------------------------cccc
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-----------------------------EHHR 227 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~-----------------------------~~~~ 227 (313)
.+++++|+||++||++|+.+.+.+.+++.++++. ++.++.|+++.. ....
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~-~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS-GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC-CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 4789999999999999999999999999999763 588888887531 1146
Q ss_pred CCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 228 AKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 228 ~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
|++..+|+++++ ++|..+. .+.|..+.+.|.++|++.+
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~---~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRH---IKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp TTCCEESEEEEECTTSBEEE---EEESBCCHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEE---EEcCCCCHHHHHHHHHHHH
Confidence 899999999999 5565543 6788888889999988876
No 259
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.98 E-value=2.5e-09 Score=82.52 Aligned_cols=105 Identities=12% Similarity=0.154 Sum_probs=83.6
Q ss_pred EeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCC------------------------
Q 021368 36 IFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDN------------------------ 90 (313)
Q Consensus 36 ~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~------------------------ 90 (313)
.++.+.+......++..+|.||++| ++|+...|.|.+++.++.+.+.|+.|+++.
T Consensus 16 ~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2b5x_A 16 WLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIF 95 (148)
T ss_dssp EESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEE
T ss_pred cccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceE
Confidence 4455555433335567888999999 999999999999999999889999999753
Q ss_pred cccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 91 EDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 91 ~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
.+.+..+++.|||.++ |++++++.++.....+.|..+.+.|.+++.+.+.
T Consensus 96 ~d~~~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 96 VDSDHALTDAFENEYV--PAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp ECSSCHHHHHTCCCCS--SEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred ECCchhHHHHhCCCCC--CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 1115689999999988 9999996665555567788899999999999876
No 260
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.97 E-value=1.5e-10 Score=84.57 Aligned_cols=99 Identities=10% Similarity=0.043 Sum_probs=77.4
Q ss_pred EEe-CCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCccc-ccchhhhhCCCC-CCCcE
Q 021368 35 TIF-TRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDV-GKPVSEYFGITG-EAPKV 110 (313)
Q Consensus 35 ~~l-t~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~-~~~l~~~~~v~~-~~~P~ 110 (313)
..+ |.+.|++++....+.+|.|++.| ++|+.+.|.|++++.. +.+.|++||.++..+ ...++.++||+. . |+
T Consensus 9 ~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~s--Pq 84 (112)
T 3iv4_A 9 IKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHES--PQ 84 (112)
T ss_dssp EECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCS--SE
T ss_pred eecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCC--Ce
Confidence 344 44567777777778888999999 9999999999999985 459999999998320 123899999994 6 99
Q ss_pred EEEEcCCCCceeccCCCCCHHHHHHHH
Q 021368 111 LAYTGNDDAKKHILDGELTLDKIKTFG 137 (313)
Q Consensus 111 i~~~~~~~~~~~~~~g~~~~~~i~~fi 137 (313)
+++|++|+.....-.+.++.+.|.+++
T Consensus 85 ~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 85 AFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEEECCEEEEEeeccccCHHHHHHhh
Confidence 999998875444346788888887764
No 261
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.96 E-value=1.5e-09 Score=84.69 Aligned_cols=95 Identities=14% Similarity=0.161 Sum_probs=71.8
Q ss_pred cChHHHh---hcCCCcEEEEEeCCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCCccc----ccCCCCcCceEE
Q 021368 168 NNFDEIV---LDESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNEH----HRAKSDGFPTIL 237 (313)
Q Consensus 168 ~~f~~~l---~~~~k~~lv~fy~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~~~~----~~~~v~~~P~i~ 237 (313)
.++++.+ ...+|+++|+||++||..|+.|.... .++...++. ++.+.++|.+.... +.|++.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEGQRYIQFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHHHHHHHHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhHHHHHHHcCCCCCCEEE
Confidence 4666655 34589999999999999999997655 456665644 68999999866433 578999999999
Q ss_pred EEeC--CCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 238 FFPA--GNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 238 ~~~~--g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++.. |..+. .+.| .+.+.++++|++.+
T Consensus 107 fld~~~G~~l~---~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 107 ILDPRTGQKLV---EWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp EECTTTCCCCE---EESS-CCHHHHHHHHHHHH
T ss_pred EEeCCCCcEee---ecCC-CCHHHHHHHHHHHH
Confidence 9954 44442 4555 89999998888775
No 262
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.95 E-value=6.1e-10 Score=87.09 Aligned_cols=93 Identities=17% Similarity=0.290 Sum_probs=68.8
Q ss_pred cChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-----------------------
Q 021368 168 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------- 224 (313)
Q Consensus 168 ~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~----------------------- 224 (313)
+.+.-... .+++++|+||++||++|+.+.+.+.++... .++.++.++++...
T Consensus 33 ~~~~l~~~-~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (156)
T 1kng_A 33 PGLDPAAF-KGKVSLVNVWASWCVPCHDEAPLLTELGKD----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANG 107 (156)
T ss_dssp CCBCGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTS
T ss_pred ceechHHh-CCCEEEEEEEcccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchh
Confidence 44443332 478999999999999999999999988765 25777777754321
Q ss_pred --cccCCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 225 --HHRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 225 --~~~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
...|++.++|+++++ ++|..+. .+.|..+.+.|.++|.+.+
T Consensus 108 ~~~~~~~v~~~P~~~~id~~G~i~~---~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 108 RASIEWGVYGVPETFVVGREGTIVY---KLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp HHHHHTTCCSSCEEEEECTTSBEEE---EEESCCCHHHHHHTHHHHH
T ss_pred HHHHhcCcCccCeEEEEcCCCCEEE---EEeCCCCHHHHHHHHHHHH
Confidence 146899999987777 5665543 6788888899999888764
No 263
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.95 E-value=4.6e-09 Score=79.76 Aligned_cols=102 Identities=17% Similarity=0.184 Sum_probs=79.4
Q ss_pred eCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc--------------------cccc
Q 021368 37 FTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------DVGK 95 (313)
Q Consensus 37 lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~--------------------~~~~ 95 (313)
++.+.+......+...+|.||++| ++|+...+.|.+++.++. .+.|+.|++++. +.+.
T Consensus 13 ~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 91 (136)
T 1zzo_A 13 LDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDG 91 (136)
T ss_dssp TTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTC
T ss_pred CCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCc
Confidence 334444333334567788899999 999999999999999999 599999998641 1156
Q ss_pred chhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 96 PVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 96 ~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
.+++.|||.++ |++++++.++... .+.|..+.+.|.+++.+.++
T Consensus 92 ~~~~~~~i~~~--P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 92 SVWANFGVTQQ--PAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp HHHHHTTCCSS--SEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred HHHHHcCCCCC--ceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 88999999988 9999997554444 67888999999999998764
No 264
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.94 E-value=2.3e-09 Score=85.00 Aligned_cols=65 Identities=20% Similarity=0.407 Sum_probs=55.7
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc------------------------c--ccCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------H--HRAKS 230 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~------------------------~--~~~~v 230 (313)
.+++++|+||++||++|+.+.+.+.+++.+++...++.++.|+++... . ..|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 478999999999999999999999999999986446888888877651 1 57899
Q ss_pred CcCceEEEEeC
Q 021368 231 DGFPTILFFPA 241 (313)
Q Consensus 231 ~~~P~i~~~~~ 241 (313)
.++|+++++..
T Consensus 127 ~~~Pt~~lid~ 137 (165)
T 3s9f_A 127 ESIPTLIGLNA 137 (165)
T ss_dssp CSSSEEEEEET
T ss_pred CCCCEEEEEeC
Confidence 99999999974
No 265
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.93 E-value=5.8e-09 Score=79.32 Aligned_cols=90 Identities=9% Similarity=0.138 Sum_probs=74.4
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc-------------------ccccchhhhhCCCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE-------------------DVGKPVSEYFGITGEA 107 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~-------------------~~~~~l~~~~~v~~~~ 107 (313)
.++..+|.||++| ++|....+.+.+++.++. .+.|+.|+++.. +.+..+++.|||.++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~- 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQ- 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSS-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCC-
Confidence 4567888899999 999999999999999999 599999998761 114588999999988
Q ss_pred CcEEEEEcCCCCceeccC---CCCCHHHHHHHHHHHh
Q 021368 108 PKVLAYTGNDDAKKHILD---GELTLDKIKTFGEDFL 141 (313)
Q Consensus 108 ~P~i~~~~~~~~~~~~~~---g~~~~~~i~~fi~~~~ 141 (313)
|++++++.++... .+. |..+.+.|.+++.+.+
T Consensus 101 -P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 101 -PAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp -SEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred -CEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 9998996654444 677 8899999999998864
No 266
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.93 E-value=1.8e-09 Score=84.37 Aligned_cols=84 Identities=13% Similarity=0.090 Sum_probs=66.3
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc------------------------c-ccCCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------H-HRAKSD 231 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~------------------------~-~~~~v~ 231 (313)
.+++++|+||++||++|+...+.+.++..++++. ++.++.++++... . ..|++.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 112 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVT 112 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcc
Confidence 3689999999999999999999999999999864 5888889887653 1 456889
Q ss_pred cCceEEEEe-CCCCCcCceeeccCcCHHHHHHHH
Q 021368 232 GFPTILFFP-AGNKSFDPINVDVDRTVVALYKFL 264 (313)
Q Consensus 232 ~~P~i~~~~-~g~~~~~~~~y~g~~~~~~l~~fi 264 (313)
++|+++++. +|..+. .+.|..+.+....-+
T Consensus 113 ~~P~~~lid~~G~i~~---~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 113 NLPSVFLVNRNNELSA---RGENIKDLDEAIKKL 143 (152)
T ss_dssp SCSEEEEEETTTEEEE---ETTTCSCHHHHHHHH
T ss_pred cCceEEEECCCCeEEE---ecCCHHHHHHHHHHH
Confidence 999999995 565543 677877766554433
No 267
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.91 E-value=3.1e-09 Score=82.24 Aligned_cols=68 Identities=16% Similarity=0.333 Sum_probs=57.0
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc------------------------c--ccCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------H--HRAKS 230 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~------------------------~--~~~~v 230 (313)
.+++++|+||++||++|+.+.+.+.+++.++++..++.++.++++... . ..|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 468999999999999999999999999999984337888888887632 1 56899
Q ss_pred CcCceEEEEe--CCCC
Q 021368 231 DGFPTILFFP--AGNK 244 (313)
Q Consensus 231 ~~~P~i~~~~--~g~~ 244 (313)
.++|+++++. +|..
T Consensus 107 ~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDV 122 (146)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCeE
Confidence 9999999997 5554
No 268
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.91 E-value=3.4e-09 Score=81.81 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=62.4
Q ss_pred eEEEcCcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-----------------
Q 021368 162 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------- 224 (313)
Q Consensus 162 v~~l~~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~----------------- 224 (313)
+..++++.+.-.- -.+++++|+||++||++|+.+.+.+.+++.+++...++.++.++++...
T Consensus 13 l~~~~g~~~~l~~-~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 13 VLKGAAADIALPS-LAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEETTEEEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEcCCCCEecHHH-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 4444444433222 2468999999999999999999999999999985347888888888631
Q ss_pred -------c--ccCCCCcCceEEEEe--CCCC
Q 021368 225 -------H--HRAKSDGFPTILFFP--AGNK 244 (313)
Q Consensus 225 -------~--~~~~v~~~P~i~~~~--~g~~ 244 (313)
. ..|++.++|+++++. +|..
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNI 122 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCE
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcE
Confidence 1 578999999999996 5554
No 269
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.90 E-value=3.5e-09 Score=83.00 Aligned_cols=92 Identities=12% Similarity=0.014 Sum_probs=75.1
Q ss_pred CCCccEEEEE-eeC-CchhhhhHHH---HHHHHhccCeEEEEEEeCCCcc--------cccchhhhhCCCCCCCcEEEEE
Q 021368 48 SPIKNQLLLF-AVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNED--------VGKPVSEYFGITGEAPKVLAYT 114 (313)
Q Consensus 48 ~~~~~~v~f~-~~~-~~c~~~~~~~---~~~a~~~~~~v~f~~vd~~~~~--------~~~~l~~~~~v~~~~~P~i~~~ 114 (313)
.+++++|.|| ++| ++|+.+.|.+ .+++..+...+.++.||++... .+..+++.|+|.++ |+++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~--Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF--PELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS--SEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC--CEEEEE
Confidence 4567888899 999 9999999999 7887777667999999998731 13488999999998 999999
Q ss_pred cCCCCceeccCCCC--CHHHHHHHHHHHhc
Q 021368 115 GNDDAKKHILDGEL--TLDKIKTFGEDFLE 142 (313)
Q Consensus 115 ~~~~~~~~~~~g~~--~~~~i~~fi~~~~~ 142 (313)
+.++.....+ |.. +.+.+.+++.+.+.
T Consensus 124 d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 124 DAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 6554455566 887 89999999998875
No 270
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.90 E-value=1.7e-09 Score=88.02 Aligned_cols=91 Identities=9% Similarity=0.110 Sum_probs=69.2
Q ss_pred CCC-cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-----------------------------ccc-
Q 021368 177 ESK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------------NEH- 225 (313)
Q Consensus 177 ~~k-~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-----------------------------~~~- 225 (313)
.++ +++|+||++||++|+...+.+.++..++.+. ++.++.++++. +..
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEV 122 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHH
Confidence 355 5999999999999999999999999999764 58888888742 111
Q ss_pred -ccCCCCcCceEEEEe-CCCCCcCcee-------eccCcCHHHHHHHHHhcCC
Q 021368 226 -HRAKSDGFPTILFFP-AGNKSFDPIN-------VDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 226 -~~~~v~~~P~i~~~~-~g~~~~~~~~-------y~g~~~~~~l~~fi~~~~~ 269 (313)
..|++.++|+++++. +|..+. ... +.|..+.+.|.+.|.+.+.
T Consensus 123 ~~~~~v~~~P~~~lid~~G~i~~-~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 123 AKAYDAACTPDFYIFDRDLKCVY-RGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp HHHHTCCEESEEEEEETTCBEEE-EECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEEEcCCCeEEE-ccccCcccccccCccCHHHHHHHHHHHHc
Confidence 567899999999995 555432 001 3466788899999988863
No 271
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.89 E-value=9.1e-09 Score=79.95 Aligned_cols=85 Identities=12% Similarity=0.184 Sum_probs=66.7
Q ss_pred CCCcEEEEEeCCCCcc--chhhhHHHHHHHHHh-cCCCcEEEEEEeCCCcc-------------------------c--c
Q 021368 177 ESKDVLLEIYAPWCGH--CQAFEPTYNKLAKHL-RGVDSIVIAKMDGTTNE-------------------------H--H 226 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~--C~~~~~~~~~la~~~-~~~~~v~~~~vd~~~~~-------------------------~--~ 226 (313)
.+++++|+||++||++ |+...+.+.++..++ ++ .++.++.++++... . .
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN-KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAK 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC-SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC-CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHH
Confidence 4689999999999999 999999999999999 54 35888888888653 1 4
Q ss_pred cCCCCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 227 RAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 227 ~~~v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
.|++.++|+++++ ++|..+. .+ .+.+.|.+.|.+.+
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~---~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKILA---KN---LRGEELKKKIENIV 147 (150)
T ss_dssp HTTCCSSSEEEEECTTSBEEE---ES---CCHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEEEE---cc---CCHHHHHHHHHHHH
Confidence 6899999999999 4555432 22 26777777776653
No 272
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.88 E-value=3.7e-09 Score=81.46 Aligned_cols=68 Identities=21% Similarity=0.411 Sum_probs=56.6
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc----------------------c----ccCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------H----HRAKS 230 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~----------------------~----~~~~v 230 (313)
.+++++|+||++||++|+.+.+.+.+++.+++...++.++.++++... . ..|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 468999999999999999999999999999984346888888887632 1 46789
Q ss_pred CcCceEEEEe--CCCC
Q 021368 231 DGFPTILFFP--AGNK 244 (313)
Q Consensus 231 ~~~P~i~~~~--~g~~ 244 (313)
.++|+++++. +|..
T Consensus 107 ~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 107 ESIPTLITINADTGAI 122 (144)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCeE
Confidence 9999999998 4554
No 273
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.87 E-value=1.4e-09 Score=79.73 Aligned_cols=75 Identities=15% Similarity=0.082 Sum_probs=60.6
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc---cccchhhhhCCCCCCCcEEEEEcCCCCceeccCC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED---VGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDG 126 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~---~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g 126 (313)
..+|.||++| ++|+.+.|.|.+++.++. .|||+... .++.+|++|||+++ |++++ +|. .+.|
T Consensus 14 ~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~--PT~~i--~G~----~~~G 79 (106)
T 3kp8_A 14 IGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSY--PTWII--NGR----TYTG 79 (106)
T ss_dssp HTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSS--SEEEE--TTE----EEES
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEe--CEEEE--CCE----EecC
Confidence 5688999999 999999999999998876 56776210 16789999999999 99866 332 3789
Q ss_pred CCCHHHHHHHHHH
Q 021368 127 ELTLDKIKTFGED 139 (313)
Q Consensus 127 ~~~~~~i~~fi~~ 139 (313)
.++.+.|.+|+.-
T Consensus 80 ~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 80 VRSLEALAVASGY 92 (106)
T ss_dssp CCCHHHHHHHHTC
T ss_pred CCCHHHHHHHhCC
Confidence 9999999998743
No 274
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.87 E-value=3.6e-09 Score=84.40 Aligned_cols=102 Identities=12% Similarity=0.098 Sum_probs=77.1
Q ss_pred EeCCCcccccc----cCCCccEEEEEeeC-CchhhhhHHH---HHHHHhccCeEEEEEEeCCCcccccch----------
Q 021368 36 IFTRENAPSVF----ESPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGKPV---------- 97 (313)
Q Consensus 36 ~lt~~~~~~~~----~~~~~~~v~f~~~~-~~c~~~~~~~---~~~a~~~~~~v~f~~vd~~~~~~~~~l---------- 97 (313)
..+..++++.+ ..++.++|.||++| ++|+.+.+.+ .++...+++.+.|+.||+++.. .+
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~---~~~~~~~~~~~~ 106 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKT---PLTEPVKIMENG 106 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCC---EEEEEEEEEETT
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCccc---ccchhhhhhhcc
Confidence 34455666544 45678888999999 9999975444 5666666657999999998743 44
Q ss_pred ----------------hhhhCCCCCCCcEEEEEcCCCCceeccCCCCC-HHHHHHHHHHHhc
Q 021368 98 ----------------SEYFGITGEAPKVLAYTGNDDAKKHILDGELT-LDKIKTFGEDFLE 142 (313)
Q Consensus 98 ----------------~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~-~~~i~~fi~~~~~ 142 (313)
++.|||.++ |++++++.++.....+.|..+ .+.+.+++.+.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~v~~~--Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 107 TERTLRTVGDKWSYLQRVKFGANAQ--PFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEEEHHHHHHHHHHHHHSCCCS--SEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhHHHHHHcCCCCc--ceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 789999998 999999655444455678888 9999999988764
No 275
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.85 E-value=7.8e-09 Score=83.61 Aligned_cols=91 Identities=9% Similarity=0.081 Sum_probs=67.4
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-----------------------------ccc--
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------------NEH-- 225 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-----------------------------~~~-- 225 (313)
.+++++|+||++||++|+...+.+.++..++.+. +.++.++++. +..
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK--VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT--EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC--eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHH
Confidence 4689999999999999999999999999999874 8888888742 111
Q ss_pred ccCCCCcCceEEEEe-CCCCCcCcee-----eccCcCHHHHHHHHHhcCC
Q 021368 226 HRAKSDGFPTILFFP-AGNKSFDPIN-----VDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 226 ~~~~v~~~P~i~~~~-~g~~~~~~~~-----y~g~~~~~~l~~fi~~~~~ 269 (313)
..|++.++|+++++. +|..+..... +.|..+.+.|.+.|.+.+.
T Consensus 110 ~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 110 KAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp HHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred HHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 578999999999994 4544310000 1233366788888888764
No 276
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.85 E-value=1.9e-08 Score=79.26 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=76.2
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcccccchhhhh------------------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKPVSEYF------------------------ 101 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~~~~~l~~~~------------------------ 101 (313)
.++..+|.||++| ++|....|.|.+++.++.+. +.|+.|+++. ....++.|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE---QLPNVKNYMKTQGIIYPVMMATPELIRAFNGY 109 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC---CHHHHHHHHHHHTCCSCEEECCHHHHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC---CHHHHHHHHHHcCCCCceEecCHHHHHHHhhh
Confidence 4567888899999 99999999999999999975 9999999987 33555555
Q ss_pred ---CCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 102 ---GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 102 ---~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
++.++ |++++++.++.....+.|..+.+.|.+++.+.+..
T Consensus 110 ~~~~i~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 110 IDGGITGI--PTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp STTCSCSS--SEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred hccCCCCC--CeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 89888 99888876655566778999999999999999864
No 277
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.84 E-value=8.6e-09 Score=79.41 Aligned_cols=84 Identities=12% Similarity=0.046 Sum_probs=63.3
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-------------------------c---ccC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------------------------H---HRA 228 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~-------------------------~---~~~ 228 (313)
.+++++|+||++||++|+.+.+.+.++..++++. ++.+..++++... . ..|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 4689999999999999999999999999999764 6888888877432 0 357
Q ss_pred CCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHh
Q 021368 229 KSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 266 (313)
Q Consensus 229 ~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~ 266 (313)
++.++|+.+++.....+ .+.+ ...+.|.++|.+
T Consensus 110 ~v~~~P~~~lid~~G~i----~~~~-~~~~~l~~~l~~ 142 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVI----IAAN-VTPEKLTEILKA 142 (143)
T ss_dssp TGGGCCCEEEECTTSBE----EEES-CCHHHHHHHHTC
T ss_pred CCCCCCcEEEECCCCEE----EEcc-CCHHHHHHHHHh
Confidence 89999999999643332 2222 346677777643
No 278
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.83 E-value=1.2e-08 Score=78.45 Aligned_cols=88 Identities=16% Similarity=0.180 Sum_probs=73.6
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhcc-CeEEEEEEeCCC-----------------------cccccchhhhhC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-GKLIFVYVQMDN-----------------------EDVGKPVSEYFG 102 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~-~~v~f~~vd~~~-----------------------~~~~~~l~~~~~ 102 (313)
.++..+|.||++| ++|+...+.|.+++.++. ..+.|+.|+++. .. +..+++.|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDS-KGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECS-SSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcC-chhHHHhcC
Confidence 5667788899999 999999999999999998 459999999864 11 458999999
Q ss_pred CCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHH
Q 021368 103 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGE 138 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~ 138 (313)
|.++ |++++++.++.....+.|..+.+.|.++++
T Consensus 112 v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 IITI--PTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CCEE--SEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred cCcc--CeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 9988 999999766555566789999999998873
No 279
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.82 E-value=3.7e-09 Score=84.76 Aligned_cols=84 Identities=17% Similarity=0.286 Sum_probs=64.0
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-------------------------cccCCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------------------------HHRAKSD 231 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~-------------------------~~~~~v~ 231 (313)
.+++++|+||++||++|+.+.+.+.++..+ ++.++.|+++... ...|++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC
Confidence 478999999999999999999999998875 3666666642211 1467899
Q ss_pred cCceEEEEe-CCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 232 GFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 232 ~~P~i~~~~-~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
++|+++++. +|..+. .+.|..+.+.|.++|.+.+
T Consensus 132 ~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRH---KIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp SSCEEEEECTTCBEEE---EEESCCCHHHHHHHTHHHH
T ss_pred CCCeEEEECCCCeEEE---EEcCCCCHHHHHHHHHHHH
Confidence 999888884 555443 6778888888888887765
No 280
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.82 E-value=3.7e-09 Score=84.02 Aligned_cols=89 Identities=13% Similarity=0.101 Sum_probs=68.3
Q ss_pred CCCcEEEEEeCCCCcc-chhhhHHHHHHHHHhcCC--CcEEEEEEeCCCccc----------------------------
Q 021368 177 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGV--DSIVIAKMDGTTNEH---------------------------- 225 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~-C~~~~~~~~~la~~~~~~--~~v~~~~vd~~~~~~---------------------------- 225 (313)
.+++++|+||++||++ |....+.+.++..+++.. .++.++.++++....
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4689999999999997 999999999999988743 258888888874310
Q ss_pred --cc---------------CCCCcCceEEEEeCCCCCcCceeeccCc--CHHHHHHHHHhcC
Q 021368 226 --HR---------------AKSDGFPTILFFPAGNKSFDPINVDVDR--TVVALYKFLKKNA 268 (313)
Q Consensus 226 --~~---------------~~v~~~P~i~~~~~g~~~~~~~~y~g~~--~~~~l~~fi~~~~ 268 (313)
.. |++.++|+++++.+|..+. .+.|.. +.+.|.+.|++.+
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~---~~~g~~~~~~~~l~~~l~~ll 172 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVL---LYSPDKAEATDRVVADLQALL 172 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEE---EECHHHHTCHHHHHHHHHHCC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEE---EECCCCCCCHHHHHHHHHHhC
Confidence 11 2356789999999444433 677766 8899999998753
No 281
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.82 E-value=3.3e-08 Score=76.71 Aligned_cols=94 Identities=14% Similarity=0.111 Sum_probs=77.4
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc--------------------cccchhhhhCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED--------------------VGKPVSEYFGITG 105 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~--------------------~~~~l~~~~~v~~ 105 (313)
.++..+|.||++| +.|+...+.+.+++.++.+ .+.|+.|+++... ....+++.|||.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 3457788899999 9999999999999999987 4999999988732 0136889999998
Q ss_pred CCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 106 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
+ |++++++.++.....+.|..+.+.|.+++++.+.+
T Consensus 109 ~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 109 I--PRFILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp S--CCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred C--CEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 8 99989886555556677889999999999998764
No 282
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.80 E-value=2.1e-08 Score=68.43 Aligned_cols=72 Identities=17% Similarity=0.172 Sum_probs=59.8
Q ss_pred EEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCC-CH
Q 021368 53 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGEL-TL 130 (313)
Q Consensus 53 ~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~-~~ 130 (313)
.|.||++| ++|+.+.|.|.+++.++.+.+.++.+| +..++++|||.++ |++++ +|. .. ..|.. +.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~------~~~~~~~~~v~~~--Pt~~~--~G~--~~-~~G~~~~~ 69 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK------EMDQILEAGLTAL--PGLAV--DGE--LK-IMGRVASK 69 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC------SHHHHHHHTCSSS--SCEEE--TTE--EE-ECSSCCCH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec------CHHHHHHCCCCcC--CEEEE--CCE--EE-EcCCCCCH
Confidence 47799999 999999999999999999889999998 2389999999999 99977 332 22 23876 89
Q ss_pred HHHHHHH
Q 021368 131 DKIKTFG 137 (313)
Q Consensus 131 ~~i~~fi 137 (313)
+.|.+++
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998875
No 283
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.80 E-value=1.9e-08 Score=83.53 Aligned_cols=87 Identities=10% Similarity=0.171 Sum_probs=67.3
Q ss_pred CC-cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-----------------------------ccc--
Q 021368 178 SK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------------NEH-- 225 (313)
Q Consensus 178 ~k-~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-----------------------------~~~-- 225 (313)
++ +++|+||++||++|+...+.+.++..++++. ++.++.|+++. ...
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~ 136 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ-GLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVA 136 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT-TEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHH
Confidence 56 5999999999999999999999999999874 58888888842 111
Q ss_pred ccCCCCcCceEEEEeCCCCCcCceeecc-----------CcCHHHHHHHHHhcCC
Q 021368 226 HRAKSDGFPTILFFPAGNKSFDPINVDV-----------DRTVVALYKFLKKNAS 269 (313)
Q Consensus 226 ~~~~v~~~P~i~~~~~g~~~~~~~~y~g-----------~~~~~~l~~fi~~~~~ 269 (313)
..|++..+|+++++.....+ .|.| ..+.+.|.+.|.+.+.
T Consensus 137 ~~~~v~~~P~~~liD~~G~i----~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 137 KAYGAACTPDFFLYDRERRL----VYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HHHTCCEESEEEEECTTCBE----EEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred HHcCCCCCCeEEEECCCCcE----EEeccccccccccccccCHHHHHHHHHHHHc
Confidence 56899999999999544433 4443 3356788888888764
No 284
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.79 E-value=4.7e-08 Score=75.95 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=77.4
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCc--------------------ccccchhhhhCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------------------DVGKPVSEYFGITG 105 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~--------------------~~~~~l~~~~~v~~ 105 (313)
.++..+|.||++| ++|+...+.+.+++.++.+. +.|+.|+.+.. +....+++.|||.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 4557788899999 99999999999999999874 88877764210 01457999999998
Q ss_pred CCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCCC
Q 021368 106 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLK 146 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~~ 146 (313)
+ |++++++.++.....+.|..+.+.|.+++.+.+.+...
T Consensus 107 ~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~~ 145 (153)
T 2l5o_A 107 Y--PTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSDA 145 (153)
T ss_dssp S--SEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCSS
T ss_pred c--CeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhhh
Confidence 8 99988876554555678889999999999999886543
No 285
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.79 E-value=4.3e-08 Score=76.19 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=77.4
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc---------------------cccchhhhhC--
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED---------------------VGKPVSEYFG-- 102 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~---------------------~~~~l~~~~~-- 102 (313)
.++.++|.||++| ++|....|.|.+++.++.+ .+.|+.|+++... ....+++.||
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 4567788899999 8999999999999999964 5999999986311 1346778899
Q ss_pred CCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCC
Q 021368 103 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
+.++ |++++++.++.....+.|..+.+.|.+++.+...+..
T Consensus 103 v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 103 VGVL--PFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp SCCS--SEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC--
T ss_pred cCCC--CEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHhh
Confidence 8877 9888887766667778999999999999999877543
No 286
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.79 E-value=2.7e-08 Score=77.21 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=77.4
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------cccchhhhhCCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------VGKPVSEYFGITGE 106 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------~~~~l~~~~~v~~~ 106 (313)
.++..+|.||++| ++|+...|.|.+++.++.+ .+.|+.|+++... .+..+++.|||.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 4557788899999 9999999999999999987 4999999986521 13478999999988
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCC
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
|++++++.++.....+.|..+.+.|.+++.+.+.+..
T Consensus 105 --P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 105 --PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp --CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred --CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 9988886655455566788999999999999987543
No 287
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=6.4e-10 Score=87.44 Aligned_cols=87 Identities=15% Similarity=0.247 Sum_probs=63.0
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHH-HHHHhcCCCcEEEEEEeCCCccc--ccCC------------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNK-LAKHLRGVDSIVIAKMDGTTNEH--HRAK------------------------ 229 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~-la~~~~~~~~v~~~~vd~~~~~~--~~~~------------------------ 229 (313)
.+++++|+||++||++|+.+.+.+.+ +...++...++.++.++++.... ..+.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46899999999999999999999998 88887623368888888776532 2332
Q ss_pred CCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 230 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 230 v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
+.++|+++++ ++|+.+. .+.| .+...+.++|++.
T Consensus 112 ~~~~P~~~lid~~G~i~~---~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVK---LTRL-YNEEEFASLVQQI 146 (159)
Confidence 5679999999 6676653 4455 4555566666554
No 288
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.75 E-value=4.3e-08 Score=75.54 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=71.7
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcccccc-------------------------hhhh
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKP-------------------------VSEY 100 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~~~~~-------------------------l~~~ 100 (313)
.++..+|.||++| ++|....|.|.+++.++.+. +.|+.|+++... . +++.
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKD---EEWLKFIRSKKIGGWLNVRDSKNHTDFKIT 106 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSS---HHHHHHHHHHTCTTSEEEECTTCCCCHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCH---HHHHHHHHHcCCCCceEEeccccchhHHHh
Confidence 4557788899999 99999999999999999986 999999998632 3 8999
Q ss_pred hCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 101 FGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 101 ~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
|||.++ |++++++.++.....+.|..+.+.+.+.+.+.+
T Consensus 107 ~~i~~~--P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 107 YDIYAT--PVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp HCCCSS--CEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred cCcCCC--CEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 999988 999999766655566677666666666665544
No 289
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.74 E-value=1.9e-08 Score=79.86 Aligned_cols=89 Identities=11% Similarity=0.137 Sum_probs=69.5
Q ss_pred CCCcEEEEEeCCCCcc-chhhhHHHHHHHHHhcC---CCcEEEEEEeCCCcc----------------------------
Q 021368 177 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNE---------------------------- 224 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~-C~~~~~~~~~la~~~~~---~~~v~~~~vd~~~~~---------------------------- 224 (313)
.+++++|+||++||++ |....+.+.++..+++. ..++.++.|+++...
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3689999999999998 99999999999999963 236888888877320
Q ss_pred --cccCCCCcCc---------------eEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 225 --HHRAKSDGFP---------------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 225 --~~~~~v~~~P---------------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
...|++...| +++++ ++|..+. .+.|..+.+.|.+.|.+.+
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTD---YYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEE---EEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEE---EECCCCCHHHHHHHHHHHH
Confidence 1357777777 77777 5666553 6778888999999998875
No 290
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.74 E-value=2.4e-09 Score=84.93 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=72.9
Q ss_pred ccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccc-hhhhhCCCCCCCcEEEEEcCCCC
Q 021368 42 APSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKP-VSEYFGITGEAPKVLAYTGNDDA 119 (313)
Q Consensus 42 ~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~-l~~~~~v~~~~~P~i~~~~~~~~ 119 (313)
+......+.+++|.||++| ++|+.+.|.|.+++..+...+.|+.||++.. .. ++..+++.....|++++++.++.
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~---~~~~~~~~~~~~~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDE---EEPKDEDFSPDGGYIPRILFLDPSGK 115 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGG---GSCSCGGGCTTCSCSSEEEEECTTSC
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCC---chHHHHHhcccCCcCCeEEEECCCCC
Confidence 3334456678899999999 9999999999998877765677888888873 34 78889984422399999954333
Q ss_pred ceeccCC----------CCCHHHHHHHHHHHhc
Q 021368 120 KKHILDG----------ELTLDKIKTFGEDFLE 142 (313)
Q Consensus 120 ~~~~~~g----------~~~~~~i~~fi~~~~~ 142 (313)
....+.| ..+.+.|.+++.+.+.
T Consensus 116 ~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 116 VHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp BCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 3334455 3789999999998875
No 291
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.72 E-value=2.2e-08 Score=78.83 Aligned_cols=89 Identities=7% Similarity=0.058 Sum_probs=69.8
Q ss_pred CCCcEEEEEeCCCCcc-chhhhHHHHHHHHHhcCC---CcEEEEEEeCCCcc----------------------------
Q 021368 177 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGV---DSIVIAKMDGTTNE---------------------------- 224 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~-C~~~~~~~~~la~~~~~~---~~v~~~~vd~~~~~---------------------------- 224 (313)
.+++++|+||++||++ |....+.+.++..+++.. .++.++.++++...
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 999999999999998641 36888888876521
Q ss_pred --cccCCCCcCc---------------eEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 225 --HHRAKSDGFP---------------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 225 --~~~~~v~~~P---------------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
...|++...| +++++ ++|..+. .+.|..+.+.|.+.|.+.+
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLD---YFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEE---EEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEE---EeCCCCCHHHHHHHHHHHH
Confidence 1467888888 66666 5666553 6778888999999998765
No 292
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.72 E-value=6.7e-08 Score=73.14 Aligned_cols=91 Identities=18% Similarity=0.140 Sum_probs=73.7
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc-------------------------ccccchhhhh
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE-------------------------DVGKPVSEYF 101 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~-------------------------~~~~~l~~~~ 101 (313)
.++..+|.||++| ++|....+.+.+++.++.+.+.++.|++... +....+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 4557788899999 9999999999999999887899999965320 1134788999
Q ss_pred CCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 102 GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 102 ~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
|+.++ |++++++.++.....+.|..+.+.+.+++.++
T Consensus 101 ~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 101 GVRSY--PTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TCCSS--SEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred CcccC--CeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99988 99999976655556678999999999998764
No 293
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.71 E-value=5.8e-08 Score=78.51 Aligned_cols=89 Identities=13% Similarity=0.120 Sum_probs=67.3
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-------cc-c-----c-cC--------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------NE-H-----H-RA-------------- 228 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-------~~-~-----~-~~-------------- 228 (313)
.+++++|+||++||++|...++.+.++..++++. ++.++.|+++. .. . . .+
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 123 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCC
Confidence 4789999999999999999999999999999875 47777777652 00 0 1 11
Q ss_pred ------------------CCCcCc---eEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 229 ------------------KSDGFP---TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 229 ------------------~v~~~P---~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++..+| +++++ ++|..+. .+.|..+.+.|.+.|.+.+.
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~---~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 124 ENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVE---RFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp C-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEE---EECTTCCHHHHHHHHHHHC-
T ss_pred cchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEE---EECCCCCHHHHHHHHHHHHh
Confidence 233566 87777 5666554 67888899999999998875
No 294
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.71 E-value=3e-09 Score=91.51 Aligned_cols=72 Identities=18% Similarity=0.213 Sum_probs=56.0
Q ss_pred cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC------ccc--ccCCCCcCceEEEEeCCCCCcCceee
Q 021368 180 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT------NEH--HRAKSDGFPTILFFPAGNKSFDPINV 251 (313)
Q Consensus 180 ~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~------~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y 251 (313)
..+++||++||++|+.+.|.|+++++.+. .+||+. +.. ++++++++||+++ +|+ .|
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l~--------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~------~~ 262 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR------TY 262 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE------EE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHcC--------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE------Ee
Confidence 34799999999999999999999986542 355552 222 6899999999655 553 59
Q ss_pred ccCcCHHHHHHHHHhc
Q 021368 252 DVDRTVVALYKFLKKN 267 (313)
Q Consensus 252 ~g~~~~~~l~~fi~~~ 267 (313)
.|..+.+.|.+|+.-.
T Consensus 263 ~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 263 TGVRSLEALAVASGYP 278 (291)
T ss_dssp ESCCCHHHHHHHTCCC
T ss_pred cCCCCHHHHHHHHCCC
Confidence 9999999999998543
No 295
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.70 E-value=2.1e-09 Score=79.86 Aligned_cols=79 Identities=19% Similarity=0.348 Sum_probs=55.9
Q ss_pred CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc-------ccccCCCCcCceEEEEeCCCCCcCcee
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------EHHRAKSDGFPTILFFPAGNKSFDPIN 250 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~-------~~~~~~v~~~P~i~~~~~g~~~~~~~~ 250 (313)
++.+++ ||++||++|+.+.+.+.+++. .+.++.+|.+.. ....+++.++|++ |.+|..+. .
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~---~ 86 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIG---G 86 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEE---C
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEEC---C
Confidence 345555 999999999999999988843 245666665554 1157899999999 45776553 4
Q ss_pred eccCc---CHHHHHHHHHhcC
Q 021368 251 VDVDR---TVVALYKFLKKNA 268 (313)
Q Consensus 251 y~g~~---~~~~l~~fi~~~~ 268 (313)
+.|.. +.+.|.+||.+..
T Consensus 87 ~~~~~~~~~~~~l~~~l~~~g 107 (116)
T 2e7p_A 87 CDTVVEKHQRNELLPLLQDAA 107 (116)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT
T ss_pred hHHHHHHHhCChHHHHHHHcc
Confidence 55533 5567889998753
No 296
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.70 E-value=2.3e-08 Score=79.57 Aligned_cols=88 Identities=15% Similarity=0.135 Sum_probs=66.5
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC--------ccc-----------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT--------NEH----------------------- 225 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~--------~~~----------------------- 225 (313)
.+++++|+||++||++|+ .++.+.++..++++. ++.+..++++. ...
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE-GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG-TEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 478999999999999999 999999999999864 58888786531 000
Q ss_pred ------------ccCCCCcCc------eEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 226 ------------HRAKSDGFP------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 226 ------------~~~~v~~~P------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
..+++.++| +++++ ++|..+. .+.|..+.+.|.+.|.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYE---RYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEE---EECTTSCGGGGHHHHHHHHT
T ss_pred ccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEE---EeCCCCCHHHHHHHHHHHHH
Confidence 025677889 77777 6666654 67787788888888887753
No 297
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.69 E-value=1.4e-08 Score=79.99 Aligned_cols=108 Identities=14% Similarity=0.075 Sum_probs=81.3
Q ss_pred ceEEeCCCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCC--------------------
Q 021368 33 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDN-------------------- 90 (313)
Q Consensus 33 ~v~~lt~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~-------------------- 90 (313)
.+..++.+.+......+..++|.||++| ++|+...|.|.+++.++.. .+.|+.|+++.
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 4556666666544445667888899999 9999999999999998753 36666665421
Q ss_pred -----cccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 91 -----EDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 91 -----~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
.+.+..+++.|+|.++ |++++++.++.....+.|..+.+.|.+++.+.+.
T Consensus 102 ~~~~~~d~~~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNISVY--PSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TSCEEECTTCHHHHHTTCCSS--SEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cceEEEcCchHHHHHcCCCcc--ceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 0014578999999988 9998886655555667788999999999998865
No 298
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.69 E-value=1.5e-08 Score=74.82 Aligned_cols=86 Identities=10% Similarity=-0.069 Sum_probs=68.8
Q ss_pred CccEEEEEeeC-CchhhhhHHHHHHHHhccCe-----EEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceec
Q 021368 50 IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-----LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHI 123 (313)
Q Consensus 50 ~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-----v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~ 123 (313)
...+|+||++| ++|+.+.+. ++..+... +.+..||.+... ...++..++|.+. ||+++|++|.. ..+
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~-~~~la~~~~V~g~--PT~i~f~~G~e-v~R 91 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPL-PPGLELARPVTFT--PTFVLMAGDVE-SGR 91 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCC-CTTCBCSSCCCSS--SEEEEEETTEE-EEE
T ss_pred CCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCC-chhHHHHCCCCCC--CEEEEEECCEE-Eee
Confidence 46788999999 999999864 44445443 778889998854 4578899999987 99999996653 346
Q ss_pred cCCCCCHHHHHHHHHHHhc
Q 021368 124 LDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 124 ~~g~~~~~~i~~fi~~~~~ 142 (313)
+.|.+..+.|..++.+.+.
T Consensus 92 i~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 92 LEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EECCCCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHh
Confidence 7899999999999998865
No 299
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.15 E-value=1.9e-09 Score=82.91 Aligned_cols=69 Identities=19% Similarity=0.371 Sum_probs=54.1
Q ss_pred CCC-cEEEEEeCCCCccchhhhHHHHHHHHHhcCC-CcEEEEEEeCCCcc---------------------------ccc
Q 021368 177 ESK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNE---------------------------HHR 227 (313)
Q Consensus 177 ~~k-~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~vd~~~~~---------------------------~~~ 227 (313)
.++ +++|+||++||++|+.+.+.+.+++.+++.. .++.++.++++... ...
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 356 9999999999999999999999999988532 25677777666431 156
Q ss_pred CCCCcCceEEEEe-CCCCC
Q 021368 228 AKSDGFPTILFFP-AGNKS 245 (313)
Q Consensus 228 ~~v~~~P~i~~~~-~g~~~ 245 (313)
|++.++|+++++. +|..+
T Consensus 104 ~~v~~~P~~~lid~~G~i~ 122 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLI 122 (143)
Confidence 7899999999996 66654
No 300
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.68 E-value=1.9e-07 Score=71.83 Aligned_cols=90 Identities=9% Similarity=0.017 Sum_probs=71.1
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhc-cCe-EEEEEEeCCCccc----------------------ccchhhhhC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSF-KGK-LIFVYVQMDNEDV----------------------GKPVSEYFG 102 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~-~~~-v~f~~vd~~~~~~----------------------~~~l~~~~~ 102 (313)
.++.++|.||++| ++|+...|.|.+++.++ .+. +.|+.|+++.... +..+++.||
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4567888899999 99999999999999999 664 9999998876210 347899999
Q ss_pred CCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 103 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|.++ |++++++.++.....+. +.+.+.+++.+++.
T Consensus 112 v~~~--P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 112 ILTL--PTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp CCSS--SEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred CCCc--CEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 9988 99988866553333322 89999999998865
No 301
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.67 E-value=1.9e-08 Score=72.66 Aligned_cols=78 Identities=19% Similarity=0.180 Sum_probs=59.7
Q ss_pred CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC--Cccc--ccCCCCcCceEEEEeCCCCCcCceeecc
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT--TNEH--HRAKSDGFPTILFFPAGNKSFDPINVDV 253 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~--~~~~--~~~~v~~~P~i~~~~~g~~~~~~~~y~g 253 (313)
..+.+++|+++||++|+.+.+.+.+++. .+.+..+|++ .+.. .+++ .++|+++ .+|.. ...+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~~-----~~~~ 80 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDITLPENSTWYERYK-FDIPVFH--LNGQF-----LMMH 80 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSSE-----EEES
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCEE-----EEec
Confidence 4578999999999999999998876632 3789999998 4432 5789 9999863 46654 2345
Q ss_pred CcCHHHHHHHHHhcCC
Q 021368 254 DRTVVALYKFLKKNAS 269 (313)
Q Consensus 254 ~~~~~~l~~fi~~~~~ 269 (313)
..+.+.|.++|.+.+.
T Consensus 81 g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 81 RVNTSKLEKQLRKLSG 96 (100)
T ss_dssp SCCHHHHHHHHHSSSC
T ss_pred CCCHHHHHHHHHHHHh
Confidence 5888999999987753
No 302
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.66 E-value=1.3e-07 Score=74.60 Aligned_cols=91 Identities=8% Similarity=0.129 Sum_probs=71.5
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCC------------------Ccc----------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMD------------------NED---------------- 92 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~------------------~~~---------------- 92 (313)
.++..+|.||+.| ++|....|.|.+++.++. .+.|+.|+++ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 4567788899999 999999999999999999 6999999987 210
Q ss_pred ---cccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCC-CHHHHHHHHHHHhcC
Q 021368 93 ---VGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGEL-TLDKIKTFGEDFLEG 143 (313)
Q Consensus 93 ---~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~-~~~~i~~fi~~~~~~ 143 (313)
+...+++.|+|.++ |++++++.++...+ .|.. +.+.|.+++.+.++|
T Consensus 115 ~~~d~~~~~~~~~v~~~--P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSI--DYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQGG 165 (165)
T ss_dssp EEECCSHHHHHTTCCSS--SEEEEEETTCCEEE--EEESCCHHHHHHHHHHC---
T ss_pred EEeChHHHHHHhCCCCc--eEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHhcC
Confidence 00378899999988 99989876553333 6777 999999999987653
No 303
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.66 E-value=6.7e-08 Score=76.06 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=64.6
Q ss_pred CCCc-EEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC---------------------ccc--ccCCCC
Q 021368 177 ESKD-VLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------NEH--HRAKSD 231 (313)
Q Consensus 177 ~~k~-~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~---------------------~~~--~~~~v~ 231 (313)
.++. ++|+|| ++||++|....+.+.++..++++. ++.++.|+++. ... ..|++.
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY-DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAK 105 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT-CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCC
Confidence 3566 999999 999999999999999999999864 58888888762 111 567888
Q ss_pred c----CceEEEEe-CCCCCcCceeeccC----cCHHHHHHHHHhc
Q 021368 232 G----FPTILFFP-AGNKSFDPINVDVD----RTVVALYKFLKKN 267 (313)
Q Consensus 232 ~----~P~i~~~~-~g~~~~~~~~y~g~----~~~~~l~~fi~~~ 267 (313)
+ +|+++++. +|..+. .+.|. ...+.+++.|++.
T Consensus 106 ~~~~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 106 GFILPARITFVIDKKGIIRH---IYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp CSSSCCCEEEEECTTSBEEE---EEECSSCTTHHHHHHHHHHHHH
T ss_pred CcCcccceEEEECCCCEEEE---EEecCCCCCcCHHHHHHHHHHh
Confidence 8 99999995 555543 55562 2356666666553
No 304
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.66 E-value=1.8e-07 Score=72.45 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=74.1
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcc-------------------cccchhhhhCCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED-------------------VGKPVSEYFGITGE 106 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~-------------------~~~~l~~~~~v~~~ 106 (313)
.++..+|.||++| ++|....+.|.+++.++.+. +.|+.|+++... ....+++.|||.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 4557788899999 99999999999999999986 999999988632 01267888999988
Q ss_pred CCcEEEEEcCCCCceeccCCC--CCHHHHHHHHHHHhcC
Q 021368 107 APKVLAYTGNDDAKKHILDGE--LTLDKIKTFGEDFLEG 143 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~--~~~~~i~~fi~~~~~~ 143 (313)
|++++++.++...+.+.|. .+.+.|.++|.+.+.+
T Consensus 107 --P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 107 --PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp --SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred --CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 9988887665455555564 4568999999998764
No 305
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.65 E-value=5.3e-08 Score=77.04 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=68.0
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-------cc-c-----c-cC--------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------NE-H-----H-RA-------------- 228 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-------~~-~-----~-~~-------------- 228 (313)
.+++++|+||++||++|...++.+.++..++++. ++.++.|+++. .. . . ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 4789999999999999999999999999999864 58888898752 00 0 1 11
Q ss_pred ---------------CC--CcCc---eEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 229 ---------------KS--DGFP---TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 229 ---------------~v--~~~P---~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
++ .++| +++++ ++|..+. .+.|..+.+.|.++|.+.+.
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVD---RYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEE---EECTTSCGGGGHHHHHHHTT
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEE---eeCCCCCHHHHHHHHHHHhh
Confidence 23 5678 77777 5666553 67788888889999988764
No 306
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.64 E-value=2.5e-08 Score=78.89 Aligned_cols=88 Identities=9% Similarity=-0.016 Sum_probs=65.1
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc----c-----ccc--------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN----E-----HHR-------------------- 227 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~----~-----~~~-------------------- 227 (313)
.+++++|+||++||++|...++.+.++..++++. ++.++.++++.. . ...
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK-GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC-CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 4789999999999999999999999999999764 588888887530 0 000
Q ss_pred ------C--------C-----CCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 228 ------A--------K-----SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 228 ------~--------~-----v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+ + +..+|+++++ ++|..+. .+.|..+.+.|.+.|.+.+
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVK---RYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEE---EECTTSCGGGGHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEE---EcCCCCCHHHHHHHHHHHh
Confidence 1 2 3345777777 5666553 6778777788888887764
No 307
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.64 E-value=3.9e-08 Score=79.69 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=68.7
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-------c-cc----c------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------N-EH----H------------------ 226 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-------~-~~----~------------------ 226 (313)
.+++++|+||++||++|...++.+.++..++++. ++.++.|+++. . .. .
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 4789999999999999999999999999999864 48888888762 0 00 0
Q ss_pred -------------cCCCCcCc------eEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcCC
Q 021368 227 -------------RAKSDGFP------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 227 -------------~~~v~~~P------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 269 (313)
.+++.++| +++++ ++|..+. .+.|..+.+.|.+.|.+.+.
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVE---RFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEE---EECTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEE---EECCCCCHHHHHHHHHHHHh
Confidence 13667788 66666 5666653 67788888999999988753
No 308
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.64 E-value=2.5e-07 Score=71.84 Aligned_cols=93 Identities=18% Similarity=0.132 Sum_probs=72.9
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCccc----------------------ccchhhhhCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDV----------------------GKPVSEYFGI 103 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~~----------------------~~~l~~~~~v 103 (313)
.++.++|.||++| ++|+...|.+.+++.++.+. +.|+.|+++.... +..+++.|||
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 4557788899999 99999999999999999875 9999999986210 2578899999
Q ss_pred CCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcCCC
Q 021368 104 TGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 104 ~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
.++ |++++++.++.....+ .+.+.+.+++.+++.+..
T Consensus 108 ~~~--P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~~~~ 144 (152)
T 2lrn_A 108 VGF--PHIILVDPEGKIVAKE---LRGDDLYNTVEKFVNGAK 144 (152)
T ss_dssp CSS--CEEEEECTTSEEEEEC---CCTTHHHHHHHHHHTSSS
T ss_pred CcC--CeEEEECCCCeEEEee---CCHHHHHHHHHHHHhhcc
Confidence 988 9988886554333332 466789999999887543
No 309
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.63 E-value=1.4e-07 Score=73.84 Aligned_cols=93 Identities=8% Similarity=0.077 Sum_probs=75.6
Q ss_pred CCCccEEEEEeeC-Cchhh-hhHHHHHHHHhccCe-EEEEEEeCCCc-------------------------ccccc---
Q 021368 48 SPIKNQLLLFAVS-NDSEK-LLPVFEEAAKSFKGK-LIFVYVQMDNE-------------------------DVGKP--- 96 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~-~~~~~~~~a~~~~~~-v~f~~vd~~~~-------------------------~~~~~--- 96 (313)
.++.++|.||++| ++|.. ..|.+.+++.+|.++ +.|+.|+++.. +....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4567888899999 99999 599999999999875 99999986310 00223
Q ss_pred ---hhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 97 ---VSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 97 ---l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+++.|||.++ |++++++.++.....+.|..+.+.|.++|.+.++
T Consensus 109 ~~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 109 IPSTMKKYRLEGT--PSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp SCHHHHHTTCCSS--SEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred hhhHHHhcccCcc--ceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 8899999988 9998997666566667899999999999999886
No 310
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.63 E-value=3.4e-08 Score=79.43 Aligned_cols=88 Identities=13% Similarity=0.059 Sum_probs=66.6
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc-------c-c-----cc----------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------E-H-----HR---------------- 227 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~-------~-~-----~~---------------- 227 (313)
.+++++|+||++||++|...++.+.++..++++. ++.++.++++.. . . .+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH-HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC-CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 4689999999999999999999999999999864 588888887530 0 0 11
Q ss_pred --------CCCCcCc-------eEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 228 --------AKSDGFP-------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 228 --------~~v~~~P-------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
+.+..+| +.+++ ++|..+. .+.|..+.+.|.+.|.+.+
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVG---AWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEE---EECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEE---EeCCCCCHHHHHHHHHHHh
Confidence 1144568 66666 6666653 6788888999999998765
No 311
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.63 E-value=7.8e-08 Score=74.80 Aligned_cols=90 Identities=10% Similarity=0.067 Sum_probs=74.2
Q ss_pred CccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc------------------------ccccchhhhhCCC
Q 021368 50 IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE------------------------DVGKPVSEYFGIT 104 (313)
Q Consensus 50 ~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~------------------------~~~~~l~~~~~v~ 104 (313)
+..+|.||++| +.|....+.|.+++.++ .+.|+.|+++.. .....+++.|||.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 57788899999 99999999999999999 488889998210 0156889999999
Q ss_pred CCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 105 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 105 ~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
++ |++++++.++.....+.|..+.+.|.++|++.+.+
T Consensus 109 ~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 109 GQ--PWTFVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp SS--CEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred cc--cEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 88 99888876655556678889999999999998763
No 312
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.59 E-value=9.4e-08 Score=76.88 Aligned_cols=87 Identities=11% Similarity=-0.018 Sum_probs=64.3
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc--------cc-----cc----------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN--------EH-----HR---------------- 227 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~--------~~-----~~---------------- 227 (313)
.+++++|+||++||++|....+.+.++..++++. ++.++.++++.. .. .+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC-CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 4689999999999999999999999999999864 588888887520 00 00
Q ss_pred -----C----------C-----CCcCceEEEE-eCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 228 -----A----------K-----SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 228 -----~----------~-----v~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
| + +...|+++++ ++|..+. .+.|..+.+.|.++|++.
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVK---RYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEE---EECTTSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEE---EeCCCCCHHHHHHHHHHh
Confidence 1 2 2335898888 5666553 677877888888877654
No 313
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.58 E-value=7.5e-08 Score=77.76 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=68.0
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc------------------------cc---ccC
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------EH---HRA 228 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~------------------------~~---~~~ 228 (313)
.+++++|+|| ++||++|....+.+.++..+++.. ++.++.++++.. .. ..|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL-GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHh
Confidence 3689999999 999999999999999999999754 588888887641 01 457
Q ss_pred CCC------cCceEEEE-eCCCCCcCceeeccCc----CHHHHHHHHHhcC
Q 021368 229 KSD------GFPTILFF-PAGNKSFDPINVDVDR----TVVALYKFLKKNA 268 (313)
Q Consensus 229 ~v~------~~P~i~~~-~~g~~~~~~~~y~g~~----~~~~l~~fi~~~~ 268 (313)
++. .+|+++++ ++|..+. .+.|.. +.+.|.+.|++..
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQA---IEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEE---EEEECTTSCCCTTHHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHh
Confidence 887 89999999 5565543 455532 6788888888765
No 314
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.56 E-value=1.3e-07 Score=77.01 Aligned_cols=89 Identities=11% Similarity=0.083 Sum_probs=69.1
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc------------------------cc---ccC
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------EH---HRA 228 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~------------------------~~---~~~ 228 (313)
.+++++|+|| ++||++|....+.+.++..+++.. ++.++.|+++.. .. ..|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR-DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHh
Confidence 3689999999 999999999999999999999764 588888887641 00 356
Q ss_pred CCC-----cCceEEEEe-CCCCCcCceeeccCc----CHHHHHHHHHhcCC
Q 021368 229 KSD-----GFPTILFFP-AGNKSFDPINVDVDR----TVVALYKFLKKNAS 269 (313)
Q Consensus 229 ~v~-----~~P~i~~~~-~g~~~~~~~~y~g~~----~~~~l~~fi~~~~~ 269 (313)
++. .+|+++++. +|..+. .+.|.. +.+.|.+.|++...
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQF---VSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CCcccCCCccceEEEEcCCCeEEE---EEecCCCCCCCHHHHHHHHHHHhh
Confidence 888 899999995 555443 454533 78999999988764
No 315
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.56 E-value=1.3e-07 Score=73.56 Aligned_cols=91 Identities=16% Similarity=0.176 Sum_probs=71.5
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc--------------------ccccchhhhhCCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------DVGKPVSEYFGITGE 106 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~--------------------~~~~~l~~~~~v~~~ 106 (313)
.+...+|.||++| ++|....|.|.+++.+ +.+.|+.|++++. +.+..+++.|||.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 4567788899999 9999999999999887 5588888876431 114578899999988
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|++++++.++.....+.|..+.+.+.+++.+.+.
T Consensus 119 --P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 119 --PETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp --CEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred --CeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 9777776555455567888999999999988764
No 316
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.55 E-value=2.8e-07 Score=71.96 Aligned_cols=94 Identities=11% Similarity=0.049 Sum_probs=75.3
Q ss_pred CCCccEEEEEeeC-Cchhhh-hHHHHHHHHhccC-eEEEEEEeCCCc-------------------------cccc----
Q 021368 48 SPIKNQLLLFAVS-NDSEKL-LPVFEEAAKSFKG-KLIFVYVQMDNE-------------------------DVGK---- 95 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~-~~~~~~~a~~~~~-~v~f~~vd~~~~-------------------------~~~~---- 95 (313)
.++.++|.||+.| ++|... .|.|.+++.+|.+ .+.|+.|+++.. +...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 4557788899999 999996 9999999999984 599999986410 0011
Q ss_pred -chhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 96 -PVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 96 -~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
.+++.|||.++ |++++++.++.....+.|..+.+.|.+++.+.++.
T Consensus 107 ~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 107 PRTMAAYQMRGT--PSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp CHHHHHTTCCSS--SEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCCC--CEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 48899999988 98888876665566678899999999999999863
No 317
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.55 E-value=8.2e-08 Score=78.29 Aligned_cols=88 Identities=8% Similarity=0.070 Sum_probs=67.6
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc----------------------------cc--
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN----------------------------EH-- 225 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~----------------------------~~-- 225 (313)
.+++++|+|| ++||++|....+.+.++..++++. ++.+..|+++.. ..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK-GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 4689999999 999999999999999999998754 588888887641 01
Q ss_pred ccCCCC-----cCceEEEEe-CCCCCcCceeeccCc----CHHHHHHHHHhcC
Q 021368 226 HRAKSD-----GFPTILFFP-AGNKSFDPINVDVDR----TVVALYKFLKKNA 268 (313)
Q Consensus 226 ~~~~v~-----~~P~i~~~~-~g~~~~~~~~y~g~~----~~~~l~~fi~~~~ 268 (313)
..|++. .+|+++++. +|..+. .+.|.. +.+.|.+.|.+..
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRH---AVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEE---EEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHHH
Confidence 457888 899999995 555443 454533 6788999888764
No 318
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.55 E-value=1.4e-07 Score=77.62 Aligned_cols=44 Identities=20% Similarity=0.185 Sum_probs=39.2
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~ 221 (313)
.+++++|+||++||++|+..+|.+.++..++++. .+.+..|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~-g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR-GLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC-CeEEEEEECC
Confidence 4689999999999999999999999999999864 5888888875
No 319
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.54 E-value=3.5e-07 Score=71.00 Aligned_cols=94 Identities=14% Similarity=0.171 Sum_probs=72.5
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc--------------------cccchhhhhCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED--------------------VGKPVSEYFGITG 105 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~--------------------~~~~l~~~~~v~~ 105 (313)
.++..+|.||++| +.|....+.+.+++.++.+ .+.|+.|+++... ....+++.|||.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 4567788899999 9999999999999999987 6899999988730 1235889999998
Q ss_pred CCCcEEEEEcCCCCceeccCCCC--CHHHHHHHHHHHhcC
Q 021368 106 EAPKVLAYTGNDDAKKHILDGEL--TLDKIKTFGEDFLEG 143 (313)
Q Consensus 106 ~~~P~i~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~~ 143 (313)
+ |++++++.++...+.+.|.. +.+.+.+++.++..+
T Consensus 107 ~--P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 107 V--PETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp B--CEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC---
T ss_pred C--CeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHH
Confidence 8 97777766554555556654 677999999887653
No 320
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.53 E-value=1.4e-07 Score=68.62 Aligned_cols=76 Identities=12% Similarity=0.124 Sum_probs=63.9
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 129 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~ 129 (313)
..+++|+++| +.|+.+.+.+++++.++. +.|..||.++ ++.+..+||++ . |+++++.+|. . .+.|..+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~---d~~l~~~ygv~-V--P~l~~~~dG~--~-v~~g~~~ 98 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDG---NEHLTRLYNDR-V--PVLFAVNEDK--E-LCHYFLD 98 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTT---CHHHHHHSTTS-C--SEEEETTTTE--E-EECSSCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCC---CHHHHHHhCCC-C--ceEEEEECCE--E-EEecCCC
Confidence 4578899999 999999999999999875 8899999998 56899999996 7 9998887664 2 2467889
Q ss_pred HHHHHHHH
Q 021368 130 LDKIKTFG 137 (313)
Q Consensus 130 ~~~i~~fi 137 (313)
.+.|.+|+
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998887
No 321
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.53 E-value=4.2e-07 Score=72.89 Aligned_cols=91 Identities=4% Similarity=-0.009 Sum_probs=70.9
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-E------EEEEEeCCCcccccchhhhh------------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-L------IFVYVQMDNEDVGKPVSEYF------------------ 101 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v------~f~~vd~~~~~~~~~l~~~~------------------ 101 (313)
.++.++|.||++| ++|....|.|.+++.+|.+. + .|+.|+++.. .+..++.|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~--~~~~~~~~~~~~~~~~~~~~d~~~~~ 135 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY--SRDIAQDFVTDNGLDYPSIYDPPFMT 135 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC--CHHHHHHHHHHTTCCSCEEECTTCGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC--CHHHHHHHHHHcCCCccEEECCcchH
Confidence 4557788899999 99999999999999999875 7 9999999872 12334433
Q ss_pred -------CCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 102 -------GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 102 -------~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
++.++ |++++++.++.....+.|..+.+.|.+++.+++.
T Consensus 136 ~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 136 AASLGGVPASVI--PTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGGTTTCCTTCC--SEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHhccCCCCCC--CeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 56767 9777777665556677898999999999999875
No 322
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.52 E-value=1.8e-08 Score=69.62 Aligned_cols=59 Identities=14% Similarity=0.240 Sum_probs=42.1
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC-Cccc--ccCCCCcCceEEEEeCCC
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT-TNEH--HRAKSDGFPTILFFPAGN 243 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~-~~~~--~~~~v~~~P~i~~~~~g~ 243 (313)
.+++||++||++|+.+.+.+.+++..+.. .+.+..+|.+ .... .++++.++|++++ +|.
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY--TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE--EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC--eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 47889999999999999999988655422 3445544432 1221 5789999999987 554
No 323
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.52 E-value=1.9e-07 Score=73.13 Aligned_cols=86 Identities=12% Similarity=0.068 Sum_probs=63.8
Q ss_pred CC-cEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC-----------------------ccc--ccCCC
Q 021368 178 SK-DVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------NEH--HRAKS 230 (313)
Q Consensus 178 ~k-~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~-----------------------~~~--~~~~v 230 (313)
++ +++|+|| ++||++|....+.+.++..++++. ++.++.++++. +.. ..|++
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND-DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS-SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 45 8999998 999999999999999999998754 58888888763 111 56788
Q ss_pred C----cCc--eEEEE-eCCCCCcCceeeccCc----CHHHHHHHHHhc
Q 021368 231 D----GFP--TILFF-PAGNKSFDPINVDVDR----TVVALYKFLKKN 267 (313)
Q Consensus 231 ~----~~P--~i~~~-~~g~~~~~~~~y~g~~----~~~~l~~fi~~~ 267 (313)
. ++| +++++ ++|..+. .+.|.. ..+.+++.|.+.
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGIIRF---AEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp EETTTTEECSEEEEECTTSBEEE---EEECCTTCCCCHHHHHHHHHHT
T ss_pred ccccCCCeeeeEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHh
Confidence 7 889 67776 5565543 455532 567788877654
No 324
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.49 E-value=1.3e-07 Score=66.25 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=60.3
Q ss_pred EEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHH
Q 021368 53 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLD 131 (313)
Q Consensus 53 ~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~ 131 (313)
+++|+++| +.|+.+.|.|++++.++ +..||.++ ++++..+||++ . |++++ .+|. .. .|..+.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~---~~~l~~~~g~~-v--Ptl~~-~~G~--~v--~g~~~~~ 66 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDD---DAALESAYGLR-V--PVLRD-PMGR--EL--DWPFDAP 66 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTT---CHHHHHHHTTT-C--SEEEC-TTCC--EE--ESCCCHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCC---CHHHHHHhCCC-c--CeEEE-ECCE--EE--eCCCCHH
Confidence 67899999 99999999999988765 57899998 66999999997 7 99976 4443 22 2788999
Q ss_pred HHHHHHHHHhc
Q 021368 132 KIKTFGEDFLE 142 (313)
Q Consensus 132 ~i~~fi~~~~~ 142 (313)
.|.+++...+.
T Consensus 67 ~L~~~l~~~~~ 77 (87)
T 1ttz_A 67 RLRAWLDAAPH 77 (87)
T ss_dssp HHHHHHHTCC-
T ss_pred HHHHHHHHHHH
Confidence 99999987654
No 325
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.49 E-value=1.8e-07 Score=74.96 Aligned_cols=45 Identities=13% Similarity=0.044 Sum_probs=39.8
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~ 222 (313)
.+++++|+||++||++|...++.+.++..++++. ++.+..|.++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS-HFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT-SEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC-CeEEEEEECCc
Confidence 4789999999999999999999999999999874 58888887653
No 326
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.47 E-value=1e-07 Score=66.33 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=55.3
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc----c--ccCC--CCcCceEEEEeCCCCCcCceeec
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----H--HRAK--SDGFPTILFFPAGNKSFDPINVD 252 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~----~--~~~~--v~~~P~i~~~~~g~~~~~~~~y~ 252 (313)
.++.|+++||++|+.+.+.+.+++..+. ++.+..+|++.+. . ..++ +.++|+++ .+|..+ .
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~--~~g~~i------~ 70 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF--VDQQHI------G 70 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE--ETTEEE------E
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccChHHHHHHHHHhCCCCceeCeEE--ECCEEE------E
Confidence 3678999999999999999999998765 4788888886643 1 4567 89999984 355432 2
Q ss_pred cCcCHHHHHHHHHhcC
Q 021368 253 VDRTVVALYKFLKKNA 268 (313)
Q Consensus 253 g~~~~~~l~~fi~~~~ 268 (313)
| .+.|.+++.++.
T Consensus 71 ~---~~~l~~~~~~~~ 83 (85)
T 1ego_A 71 G---YTDFAAWVKENL 83 (85)
T ss_dssp S---SHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHhc
Confidence 2 257888887653
No 327
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.47 E-value=3.5e-07 Score=72.26 Aligned_cols=90 Identities=11% Similarity=0.058 Sum_probs=69.9
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc--------------------ccccchhhhhCCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------DVGKPVSEYFGITGE 106 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~--------------------~~~~~l~~~~~v~~~ 106 (313)
.++..+|.||++| ++|....|.|.+++.+ + +.|+.|++++. +.+..+++.|||.++
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~-v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 126 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--G-IRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGA 126 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T-CCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC--C-CEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcccc
Confidence 5667888899999 9999999999999987 4 77777774321 115578999999988
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+.++++.++...+.+.|..+.+.+.+++.+.+.
T Consensus 127 --P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 127 --PETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp --SEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred --CEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 9666666555455567788999999999888764
No 328
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=1.9e-06 Score=66.57 Aligned_cols=90 Identities=14% Similarity=0.127 Sum_probs=70.7
Q ss_pred CCCccEEEEEeeC-Cc--hhhhhHHHHHHHHhc-cCe-EEEEEEeCCCccc----------------------ccchhhh
Q 021368 48 SPIKNQLLLFAVS-ND--SEKLLPVFEEAAKSF-KGK-LIFVYVQMDNEDV----------------------GKPVSEY 100 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~--c~~~~~~~~~~a~~~-~~~-v~f~~vd~~~~~~----------------------~~~l~~~ 100 (313)
.++..+|.||++| ++ |....|.+.++..+| ++. +.|+.|+++.... ...+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3557788899999 99 999999999999999 654 9999999886310 2378899
Q ss_pred hCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 101 FGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 101 ~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|||.+. |++++++.++.....+ .+.+.+.+.+.+.+.
T Consensus 112 ~~v~~~--P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 112 YSIYKI--PANILLSSDGKILAKN---LRGEELKKKIENIVE 148 (150)
T ss_dssp TTCCSS--SEEEEECTTSBEEEES---CCHHHHHHHHHHHHH
T ss_pred cCCCcc--CeEEEECCCCEEEEcc---CCHHHHHHHHHHHHh
Confidence 999988 9998997655433333 388889988888764
No 329
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.45 E-value=8.2e-07 Score=74.68 Aligned_cols=55 Identities=16% Similarity=0.100 Sum_probs=38.7
Q ss_pred CCccEEEEE-eeC-Cchh-hhhHHHHHHHHhccC-eE-EEEEEeCCCcccccchhhhhCC
Q 021368 49 PIKNQLLLF-AVS-NDSE-KLLPVFEEAAKSFKG-KL-IFVYVQMDNEDVGKPVSEYFGI 103 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~-~~~~~~~~~a~~~~~-~v-~f~~vd~~~~~~~~~l~~~~~v 103 (313)
++..++.|| +.| +.|. ...|.|.+++.+|.+ .+ .++.|..+.......+++++++
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 92 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKS 92 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTC
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCC
Confidence 446677788 899 9999 999999999999874 37 7888876642213334444444
No 330
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.45 E-value=7.1e-07 Score=72.30 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=74.6
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCc--------------------------ccccchhhhhC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------------------------DVGKPVSEYFG 102 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~--------------------------~~~~~l~~~~~ 102 (313)
.++|.||++| ++|....|.|.+++.++.++ +.|+.|+++.. +.+..+++.|+
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYD 127 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhC
Confidence 3788899999 99999999999999999874 99999998531 11457889999
Q ss_pred CCCCCCcEEEEEcCCCCceec---------cCCCCCHHHHHHHHHHHhcCCC
Q 021368 103 ITGEAPKVLAYTGNDDAKKHI---------LDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~---------~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
|... |++++++.++...+. +.|..+.+.|.+.|++.+.++.
T Consensus 128 v~~~--P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 128 AACT--PDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp CCEE--SEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred CCCC--CeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 9988 998888765544444 4577899999999999987543
No 331
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.43 E-value=1.2e-07 Score=75.42 Aligned_cols=89 Identities=11% Similarity=0.106 Sum_probs=69.1
Q ss_pred HHHhcCCCceEEeC--CCcccccccCCCccEEEEEeeC-CchhhhhH-HH--HHHHHhccCeEEEEEEeCCCcccccchh
Q 021368 25 FVFSNKLPLVTIFT--RENAPSVFESPIKNQLLLFAVS-NDSEKLLP-VF--EEAAKSFKGKLIFVYVQMDNEDVGKPVS 98 (313)
Q Consensus 25 fi~~~~~~~v~~lt--~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~-~~--~~~a~~~~~~v~f~~vd~~~~~~~~~l~ 98 (313)
++..+....|.... .+.|......+++++|.|+++| ++|+.+.+ .| .+++..+++.+.++.||.++ .+.+.
T Consensus 13 yl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de---~~~l~ 89 (173)
T 3ira_A 13 YLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREE---RPDID 89 (173)
T ss_dssp HHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTT---CHHHH
T ss_pred HHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcc---cCcHH
Confidence 55666555554333 3556666677788999999999 99999999 34 57888888789999999987 56888
Q ss_pred hhh--------CCCCCCCcEEEEEcCCC
Q 021368 99 EYF--------GITGEAPKVLAYTGNDD 118 (313)
Q Consensus 99 ~~~--------~v~~~~~P~i~~~~~~~ 118 (313)
+.| |+.+. |++++++.++
T Consensus 90 ~~y~~~~q~~~gv~g~--Pt~v~l~~dG 115 (173)
T 3ira_A 90 NIYMTVCQIILGRGGW--PLNIIMTPGK 115 (173)
T ss_dssp HHHHHHHHHHHSCCCS--SEEEEECTTS
T ss_pred HHHHHHHHHHcCCCCC--cceeeECCCC
Confidence 888 99988 9999997544
No 332
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.41 E-value=1.4e-06 Score=70.17 Aligned_cols=95 Identities=11% Similarity=0.104 Sum_probs=73.4
Q ss_pred CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc--------------------------ccccchhhhh
Q 021368 49 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------------DVGKPVSEYF 101 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~--------------------------~~~~~l~~~~ 101 (313)
++.++|.||++| ++|....+.+.+++.++.+++.|+.|+++.. +....+++.|
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 112 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAY 112 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHc
Confidence 457788899999 9999999999999999998799999998431 1145788999
Q ss_pred CCCCCCCcEEEEEcCCCCceec--------cCCCCCHHHHHHHHHHHhcCCC
Q 021368 102 GITGEAPKVLAYTGNDDAKKHI--------LDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 102 ~v~~~~~P~i~~~~~~~~~~~~--------~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
||.+. |++++++.++...+. +.|..+.+.|.+.|.+.+.++.
T Consensus 113 ~v~~~--P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 113 RALRT--PEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp TCCEE--SEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred CCCCC--CeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 99988 998888765433332 1133478999999999987644
No 333
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.40 E-value=2.1e-07 Score=73.70 Aligned_cols=96 Identities=6% Similarity=-0.093 Sum_probs=67.7
Q ss_pred eCCCccccccc-CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhC---CCCCCCcEE
Q 021368 37 FTRENAPSVFE-SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFG---ITGEAPKVL 111 (313)
Q Consensus 37 lt~~~~~~~~~-~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~---v~~~~~P~i 111 (313)
++++.+..+.. .+...+|.|+++| ++|+...|.+.+++.++.+ +.|..||.+. ++.++.+|+ +.+. |++
T Consensus 41 ~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~-v~~~~v~~d~---~~~~~~~~~~~~v~~i--Pt~ 114 (167)
T 1z6n_A 41 LPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPN-IELAIISKGR---AEDDLRQRLALERIAI--PLV 114 (167)
T ss_dssp CCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTT-EEEEEECHHH---HHHHTTTTTTCSSCCS--SEE
T ss_pred CCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC-cEEEEEECCC---CHHHHHHHHHcCCCCc--CeE
Confidence 34444443332 3446677899999 9999999999999999875 9999999887 568888887 9888 999
Q ss_pred EEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 112 AYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 112 ~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
+++++++.....+ |... ..+..++.++
T Consensus 115 i~~~~~G~~~~~~-g~~p-~~~~~~i~~~ 141 (167)
T 1z6n_A 115 LVLDEEFNLLGRF-VERP-QAVLDGGPQA 141 (167)
T ss_dssp EEECTTCCEEEEE-ESSC-HHHHHHCHHH
T ss_pred EEECCCCCEEEEE-cCCC-HHHHHhHHHH
Confidence 9998764332333 4333 3344444443
No 334
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.40 E-value=1.4e-06 Score=67.96 Aligned_cols=90 Identities=14% Similarity=0.216 Sum_probs=68.9
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhcc-CeEEEEEEeCCCc----------------ccccchhhhhCCCCCCCc
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-GKLIFVYVQMDNE----------------DVGKPVSEYFGITGEAPK 109 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~-~~v~f~~vd~~~~----------------~~~~~l~~~~~v~~~~~P 109 (313)
.++..+|.||++| +.|....+.|.+++.++. ..+.|+.|+++.. +....+++.|||.++ |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~--P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRL--P 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSS--S
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCc--c
Confidence 4557788899999 999999999999999998 3599999999761 113589999999988 9
Q ss_pred EEEEEcCCCCceeccCCCC--CHHHHHHHHHH
Q 021368 110 VLAYTGNDDAKKHILDGEL--TLDKIKTFGED 139 (313)
Q Consensus 110 ~i~~~~~~~~~~~~~~g~~--~~~~i~~fi~~ 139 (313)
++++++.++.....+.|.. +..++.+.+.+
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHh
Confidence 9888876665556666653 44555555544
No 335
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.40 E-value=1.2e-06 Score=69.51 Aligned_cols=90 Identities=11% Similarity=0.159 Sum_probs=66.0
Q ss_pred CCCcEEEEEeCCCCc-cchhhhHHHHHHHHHhcCCC-cEEEEEEeCCCc---cc------cc------------------
Q 021368 177 ESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGVD-SIVIAKMDGTTN---EH------HR------------------ 227 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~-~C~~~~~~~~~la~~~~~~~-~v~~~~vd~~~~---~~------~~------------------ 227 (313)
.+++++|+||++||+ +|....+.+.++...++... ++.++.|+++.. .. .+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 478999999999999 99999999999999987542 488888887621 00 01
Q ss_pred -------------------CCCCcCceEEEE-eCCCCCcCceeeccCc--CHHHHHHHHHhcCC
Q 021368 228 -------------------AKSDGFPTILFF-PAGNKSFDPINVDVDR--TVVALYKFLKKNAS 269 (313)
Q Consensus 228 -------------------~~v~~~P~i~~~-~~g~~~~~~~~y~g~~--~~~~l~~fi~~~~~ 269 (313)
+++...|+++++ ++|..+. .+.|.. +.+.|.+.|++.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~---~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLK---DYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEE---EEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEE---EEcCCCCCCHHHHHHHHHHHHh
Confidence 234567887777 4555443 566754 58899999998864
No 336
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.39 E-value=1.7e-07 Score=80.55 Aligned_cols=75 Identities=15% Similarity=0.082 Sum_probs=60.1
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc---cccchhhhhCCCCCCCcEEEEEcCCCCceeccCC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED---VGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDG 126 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~---~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g 126 (313)
..+++||++| ++|+++.|.|+++|++++ .+||+..+ .++++|+++||+++ ||+++ +|+ .+.|
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~v--PT~~i--~G~----~~~G 264 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSY--PTWII--NGR----TYTG 264 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCST--TEEEE--TTE----EEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCccc--CeEEE--CCE----EecC
Confidence 4579999999 999999999999998773 56776321 16799999999999 99644 332 3789
Q ss_pred CCCHHHHHHHHHH
Q 021368 127 ELTLDKIKTFGED 139 (313)
Q Consensus 127 ~~~~~~i~~fi~~ 139 (313)
.++.++|.+|+.-
T Consensus 265 ~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 265 VRSLEALAVASGY 277 (291)
T ss_dssp CCCHHHHHHHTCC
T ss_pred CCCHHHHHHHHCC
Confidence 9999999999754
No 337
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.39 E-value=5.5e-07 Score=72.50 Aligned_cols=44 Identities=9% Similarity=-0.002 Sum_probs=39.1
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~ 221 (313)
.+++++|+||++||++|...++.+.++..++++. ++.+..++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC-GLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC-CeEEEEEECc
Confidence 4689999999999999999999999999999864 5888888875
No 338
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.38 E-value=1.8e-06 Score=67.13 Aligned_cols=87 Identities=7% Similarity=0.001 Sum_probs=67.8
Q ss_pred CCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCccc-----------------cc---chhhhhCCCCC
Q 021368 49 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDV-----------------GK---PVSEYFGITGE 106 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~~-----------------~~---~l~~~~~v~~~ 106 (313)
++.++|.||++| ++|....|.|.+++.+|.+. +.|+.|+++.... .. .+++.|||.+.
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~ 114 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNL 114 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSC
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccC
Confidence 457788899999 99999999999999999875 9999999886420 00 28899999988
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHH
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFG 137 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi 137 (313)
|++++++.++.....+.|..+.++...-.
T Consensus 115 --P~~~lid~~G~i~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 115 --PSVFLVNRNNELSARGENIKDLDEAIKKL 143 (152)
T ss_dssp --SEEEEEETTTEEEEETTTCSCHHHHHHHH
T ss_pred --ceEEEECCCCeEEEecCCHHHHHHHHHHH
Confidence 99989976655566677877766654443
No 339
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.37 E-value=7e-07 Score=72.66 Aligned_cols=88 Identities=10% Similarity=0.063 Sum_probs=66.5
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc------------------------------c
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------------H 225 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~------------------------------~ 225 (313)
.+++++|+|| ++||++|....+.+.++..+++.. ++.++.|+++... .
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL-GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 4689999999 999999999999999999999764 5888888876421 0
Q ss_pred ccCCCC------cCceEEEEe-CCCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 226 HRAKSD------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 226 ~~~~v~------~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
..|++. .+|+++++. +|..+. .+.| ..+.+.+++.|.+..
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQ---ITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEE---EEeCCCCCCCCHHHHHHHHHhcc
Confidence 356776 799998884 554432 3334 346788999988764
No 340
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.37 E-value=1.6e-06 Score=64.92 Aligned_cols=98 Identities=9% Similarity=0.133 Sum_probs=75.4
Q ss_pred CCeEEEc-CcChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcccccCCCCcCceEEE
Q 021368 160 GDVKIVV-GNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILF 238 (313)
Q Consensus 160 ~~v~~l~-~~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~P~i~~ 238 (313)
..+..|+ .+.+.+++ ...+.++|-|+++||+.| .+.|.++|+.+ . .+.|+..+. ......+++. .|++++
T Consensus 21 ~~~~~i~s~~e~e~fi-~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~--d~~F~~t~~-~~v~~~~~v~-~~~vvl 91 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFI-AATEVAVIGFFQDLEIPA---VPILHSMVQKF-P--GVSFGISTD-SEVLTHYNIT-GNTICL 91 (124)
T ss_dssp CCCEECCSHHHHHHHH-HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T--TSEEEEECC-HHHHHHTTCC-SSCEEE
T ss_pred CcceEcCCHHHHHHHH-hcCCCEEEEEECCCCChh---HHHHHHHHHhC-C--CceEEEECh-HHHHHHcCCC-CCeEEE
Confidence 3445564 46677776 457789999999999988 67899999998 4 588987753 2233788887 799999
Q ss_pred EeCCCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 239 FPAGNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 239 ~~~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
|+.... .++.|.| ..+.+.|.+||..+.
T Consensus 92 fkkfde--~~~~~~g~~~~~~~~~~L~~FI~~n~ 123 (124)
T 2l4c_A 92 FRLVDN--EQLNLEDEDIESIDATKLSRFIEINS 123 (124)
T ss_dssp EETTTT--EEEEECHHHHTTCCHHHHHHHHHHHC
T ss_pred EEcCCC--CceeecCcccCCCCHHHHHHHHHHhc
Confidence 998764 4567887 689999999999873
No 341
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.35 E-value=1.6e-06 Score=69.21 Aligned_cols=90 Identities=9% Similarity=0.122 Sum_probs=71.2
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc--------------------ccccchhhhhCCCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------DVGKPVSEYFGITGE 106 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~--------------------~~~~~l~~~~~v~~~ 106 (313)
.++.++|.||++| ++|....|.|.+++.+ + +.|+.|++++. +....+++.|||.++
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~-v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--G-VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T-CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--C-CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 3557788899999 9999999999999988 4 77777774221 114578899999988
Q ss_pred CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 107 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 107 ~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|++++++.++...+.+.|..+.+.+.+++.+.+.
T Consensus 134 --P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 134 --PETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp --CEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred --CeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9887887766566677888999999999888765
No 342
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.34 E-value=1.2e-06 Score=67.02 Aligned_cols=89 Identities=10% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHH---HHHhccC-eEEEEEEeCCCccc-c------------------cch--hhhh
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEE---AAKSFKG-KLIFVYVQMDNEDV-G------------------KPV--SEYF 101 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~---~a~~~~~-~v~f~~vd~~~~~~-~------------------~~l--~~~~ 101 (313)
.++..+|.||++| ++|....|.+.+ +..++++ .+.|+.|+++.... . ..+ .+.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 4567788899999 999999999998 8888875 39999998875320 0 011 3389
Q ss_pred CCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 102 GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 102 ~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
||.++ |++++++.++.. .+ +..+.+.|.+++.+..
T Consensus 106 ~v~~~--P~~~lid~~G~i--~~-~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 106 DIRAT--PTIYLLDGRKRV--IL-KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CCCSS--SEEEEECTTCBE--EE-CSCCHHHHHHHHHC--
T ss_pred CCCCC--CeEEEECCCCCE--Ee-cCCCHHHHHHHHHHHc
Confidence 99988 999888765432 22 5688999999998764
No 343
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.34 E-value=2.2e-06 Score=68.75 Aligned_cols=94 Identities=12% Similarity=0.094 Sum_probs=72.1
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhcc-CeEEEEEEeCCCc--ccccchhhhhCCC-------------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-GKLIFVYVQMDNE--DVGKPVSEYFGIT------------------- 104 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~-~~v~f~~vd~~~~--~~~~~l~~~~~v~------------------- 104 (313)
.++.++|.||+.| ++|....+.|.++..++. ..+.|+.|+++.. .....+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 4557788899999 999999999999999998 3588999998763 1135667777774
Q ss_pred ----CCCCcEEEEEcCCCCceeccCCCCC--HHHHHHHHHHHhcC
Q 021368 105 ----GEAPKVLAYTGNDDAKKHILDGELT--LDKIKTFGEDFLEG 143 (313)
Q Consensus 105 ----~~~~P~i~~~~~~~~~~~~~~g~~~--~~~i~~fi~~~~~~ 143 (313)
++ |++++++.++...+.+.|..+ .+.+.++++..+.+
T Consensus 139 ~~~~~~--P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 139 GRALGM--PTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp TCCSSS--SEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred cccCCC--CEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 55 998888766555556667654 78999999998864
No 344
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.32 E-value=1.9e-06 Score=67.01 Aligned_cols=91 Identities=14% Similarity=0.106 Sum_probs=71.2
Q ss_pred CCCccEEEEEeeC-CchhhhhHHH---HHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCC-CCcee
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGND-DAKKH 122 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~---~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~-~~~~~ 122 (313)
.+++++|.|+++| ..|+.+.... .+|+..++..+.++.+|.++.. +..+++.|++.++ |+++|++.. +....
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~-~~~l~~~y~v~~~--P~~~fld~~~G~~l~ 117 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEE-GQRYIQFYKLGDF--PYVSILDPRTGQKLV 117 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHH-HHHHHHHHTCCSS--SEEEEECTTTCCCCE
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHh-HHHHHHHcCCCCC--CEEEEEeCCCCcEee
Confidence 4667888899999 9999997654 5567777656889999997654 6789999999988 999999875 32222
Q ss_pred ccCCCCCHHHHHHHHHHHhc
Q 021368 123 ILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 123 ~~~g~~~~~~i~~fi~~~~~ 142 (313)
.+.| ++.+.+.+++.+++.
T Consensus 118 ~~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 118 EWHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp EESS-CCHHHHHHHHHHHHH
T ss_pred ecCC-CCHHHHHHHHHHHHH
Confidence 2455 899999999988875
No 345
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.30 E-value=1.1e-06 Score=71.05 Aligned_cols=88 Identities=11% Similarity=0.103 Sum_probs=65.5
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-----------------------------c-
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------------H- 225 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~-----------------------------~- 225 (313)
.+++++|+|| ++||++|....+.+.++..++++. ++.++.|+++... .
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER-NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH
Confidence 4689999999 999999999999999999999643 5788888776310 0
Q ss_pred ccCCCC-----cCceEEEEe-CCCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 226 HRAKSD-----GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 226 ~~~~v~-----~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
..|++. .+|+++++. +|..+. .+.| ..+.+.+.+.|.+..
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQH---LLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEE---EEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEE---EEeCCCCCCCCHHHHHHHHHHHh
Confidence 357887 899999994 555432 3334 245788888887654
No 346
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.30 E-value=1.5e-06 Score=77.15 Aligned_cols=93 Identities=14% Similarity=0.071 Sum_probs=76.3
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCc------------------------ccccchhhhh
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNE------------------------DVGKPVSEYF 101 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~------------------------~~~~~l~~~~ 101 (313)
.++.++|.||++| ++|+...|.|.+++.+|.+ .+.|+.|+++.. +....+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 3557788899999 9999999999999999986 499999988631 0135788999
Q ss_pred CCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 102 GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 102 ~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+|..+ |++++++.+......+.|..+.+.|.++|.+.+.
T Consensus 161 gV~~~--Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 161 RNRYW--PAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TCCEE--SEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHH
T ss_pred CCCcc--CEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHh
Confidence 99988 9988887666556667888899999999998875
No 347
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.29 E-value=8.1e-07 Score=69.03 Aligned_cols=77 Identities=10% Similarity=0.033 Sum_probs=52.5
Q ss_pred ccCCCccEEEEEeeC-CchhhhhHHHHHHHH--hccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCcee
Q 021368 46 FESPIKNQLLLFAVS-NDSEKLLPVFEEAAK--SFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKH 122 (313)
Q Consensus 46 ~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~--~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~ 122 (313)
...+++++|.||++| ++|+.+.|.+.+... .+.+ ..|+.|+++.+ ...++..+++.++ |+++|++.++....
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~-~~fv~V~vD~e--~~~~~~~~~v~~~--PT~~f~~~~G~~v~ 115 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ-NKFIMLNLMHE--TTDKNLSPDGQYV--PRIMFVDPSLTVRA 115 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH-HTCEEEEESSC--CSCGGGCTTCCCS--SEEEEECTTSCBCT
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh-cCeEEEEecCC--chhhHhhcCCCCC--CEEEEECCCCCEEE
Confidence 345678899999999 999999999886432 2211 23455555432 3467788999988 99999984443444
Q ss_pred ccCCC
Q 021368 123 ILDGE 127 (313)
Q Consensus 123 ~~~g~ 127 (313)
.+.|.
T Consensus 116 ~~~G~ 120 (151)
T 3ph9_A 116 DIAGR 120 (151)
T ss_dssp TCCCS
T ss_pred EEeCC
Confidence 55665
No 348
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.28 E-value=1.6e-06 Score=71.94 Aligned_cols=87 Identities=11% Similarity=0.105 Sum_probs=65.7
Q ss_pred CCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc---------------------------c---c
Q 021368 178 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE---------------------------H---H 226 (313)
Q Consensus 178 ~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~---------------------------~---~ 226 (313)
+++++|+|| ++||++|....+.+.++..+|++. ++.++.|+++... . .
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV-NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 589999999 999999999999999999999653 5888888776410 0 3
Q ss_pred cCCCC------cCceEEEEe-CCCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 227 RAKSD------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 227 ~~~v~------~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
.|++. .+|+++++. +|..+. .+.| ..+.+++.+.|.+..
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~---~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKH---LSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHhh
Confidence 56777 899999994 555432 2333 356788888888764
No 349
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.28 E-value=5.4e-06 Score=68.54 Aligned_cols=92 Identities=12% Similarity=0.130 Sum_probs=72.3
Q ss_pred cEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCc--------------------------ccccchhhhhCC
Q 021368 52 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------------------------DVGKPVSEYFGI 103 (313)
Q Consensus 52 ~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~--------------------------~~~~~l~~~~~v 103 (313)
++|.||+.| +.|....|.|.+++.+|.++ +.|+.|+++.. +....+++.|||
T Consensus 62 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v 141 (218)
T 3u5r_E 62 LLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGA 141 (218)
T ss_dssp EEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTC
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCC
Confidence 778899999 99999999999999999875 99999998521 114588999999
Q ss_pred CCCCCcEEEEEcCCCCceec---------cCCCCCHHHHHHHHHHHhcCCC
Q 021368 104 TGEAPKVLAYTGNDDAKKHI---------LDGELTLDKIKTFGEDFLEGKL 145 (313)
Q Consensus 104 ~~~~~P~i~~~~~~~~~~~~---------~~g~~~~~~i~~fi~~~~~~~~ 145 (313)
... |++++++.++...+. ..+..+.+.|.+.|+..+.++-
T Consensus 142 ~~~--P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 142 ACT--PDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp CEE--SEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred CCC--CeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 988 999888765533322 1234568999999999988654
No 350
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.27 E-value=1.4e-06 Score=71.12 Aligned_cols=88 Identities=10% Similarity=0.073 Sum_probs=65.9
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc---------------------------c---
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE---------------------------H--- 225 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~---------------------------~--- 225 (313)
.+++++|+|| ++||++|....+.+.++..+++.. ++.++.|+++... .
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~-~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI-GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH
Confidence 3689999999 999999999999999999999763 5888888876410 0
Q ss_pred ccCCCC------cCceEEEEe-CCCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 226 HRAKSD------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 226 ~~~~v~------~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
..|++. .+|+++++. +|..+. .+.| ..+.++|.+.|.+..
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQ---ITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEE---EEeCCCCCCCCHHHHHHHHHHhh
Confidence 346777 899999995 454432 3333 346788888887664
No 351
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.26 E-value=2e-06 Score=65.92 Aligned_cols=66 Identities=11% Similarity=0.031 Sum_probs=55.6
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhcc--CeEEEEEEeCCCcc---------------------cccchhhhhCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK--GKLIFVYVQMDNED---------------------VGKPVSEYFGI 103 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~--~~v~f~~vd~~~~~---------------------~~~~l~~~~~v 103 (313)
.++.++|.||++| ++|+...|.|.+++.++. +.+.|+.|+++... ....+++.|||
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 4557788899999 999999999999999998 36999999988621 13578899999
Q ss_pred CCCCCcEEEEEc
Q 021368 104 TGEAPKVLAYTG 115 (313)
Q Consensus 104 ~~~~~P~i~~~~ 115 (313)
.++ |++++++
T Consensus 107 ~~~--P~~~lid 116 (144)
T 1i5g_A 107 KSI--PTLVGVE 116 (144)
T ss_dssp CSS--SEEEEEE
T ss_pred CCC--CEEEEEE
Confidence 988 9999997
No 352
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.23 E-value=2.9e-06 Score=65.25 Aligned_cols=66 Identities=15% Similarity=0.143 Sum_probs=55.5
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhcc--CeEEEEEEeCCCcc---------------------cccchhhhhCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK--GKLIFVYVQMDNED---------------------VGKPVSEYFGI 103 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~--~~v~f~~vd~~~~~---------------------~~~~l~~~~~v 103 (313)
.++.++|.||++| ++|+...|.|.+++.++. +.+.|+.|+++... .+..+++.|||
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 4557788899999 999999999999999998 36899999987631 13578899999
Q ss_pred CCCCCcEEEEEc
Q 021368 104 TGEAPKVLAYTG 115 (313)
Q Consensus 104 ~~~~~P~i~~~~ 115 (313)
.++ |++++++
T Consensus 107 ~~~--Pt~~lid 116 (146)
T 1o8x_A 107 ESI--PTLIGVD 116 (146)
T ss_dssp CSS--SEEEEEE
T ss_pred CCC--CEEEEEE
Confidence 988 9999997
No 353
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.20 E-value=2.3e-06 Score=70.53 Aligned_cols=88 Identities=11% Similarity=0.100 Sum_probs=64.6
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc------------------------------c
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------------H 225 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~------------------------------~ 225 (313)
.+++++|+|| ++||++|....+.+.++..+|++. ++.++.|+++... .
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER-NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH
Confidence 4689999999 999999999999999999999643 5777777765410 0
Q ss_pred ccCCCC-----cCceEEEEe-CCCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 226 HRAKSD-----GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 226 ~~~~v~-----~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
..|++. .+|+++++. +|..+. .+.| ..+.+.|.+.|....
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~---~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQH---LLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHHH
Confidence 356777 799998885 454432 3333 245788888887654
No 354
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.20 E-value=1.4e-06 Score=72.09 Aligned_cols=79 Identities=15% Similarity=0.257 Sum_probs=57.3
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC-----------------------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT----------------------------------- 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~----------------------------------- 221 (313)
+.+.+++.||++||++|+.+.+.+.++... ++.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~ 159 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL-----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVA 159 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCC
Confidence 467899999999999999999999988652 2444433221
Q ss_pred -----Cccc------ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 222 -----TNEH------HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 222 -----~~~~------~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
.... ..+++.++|+++ +.+|. .+.|..+.+.|.++|.+.
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gtPt~v-~~dG~------~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 160 PASCDVDIADHYALGVQLGVSGTPAVV-LSNGT------LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCCSCCHHHHHHHHHHHTCCSSSEEE-CTTSC------EEESCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCccCEEE-EcCCe------EecCCCCHHHHHHHHHHh
Confidence 1000 467999999984 45552 567888889999998765
No 355
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.18 E-value=5.3e-06 Score=63.41 Aligned_cols=85 Identities=11% Similarity=0.078 Sum_probs=63.8
Q ss_pred CCccEEEEEeeC-CchhhhhHHHHH---HHHhccC-eEEEEEEeCCCcccc---------------------cchhhhhC
Q 021368 49 PIKNQLLLFAVS-NDSEKLLPVFEE---AAKSFKG-KLIFVYVQMDNEDVG---------------------KPVSEYFG 102 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~c~~~~~~~~~---~a~~~~~-~v~f~~vd~~~~~~~---------------------~~l~~~~~ 102 (313)
+...+|.||++| ++|....|.+.+ +..++++ .+.|+.|+.+..... ..+.+.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 457788899999 999999999999 9999964 589999998764100 01477899
Q ss_pred CCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHH
Q 021368 103 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGE 138 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~ 138 (313)
|.++ |++++++.++...+. ..+.+.|.+|++
T Consensus 111 v~~~--P~~~lid~~G~i~~~---~~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAI--PTLYLLDKNKTVLLK---DATLQKVEQYLA 141 (142)
T ss_dssp CTTC--SEEEEECTTCBEEEE---EECHHHHHHHHH
T ss_pred CCcC--CeEEEECCCCcEEec---CCCHHHHHHHHh
Confidence 9988 999888766533222 246788888875
No 356
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.18 E-value=1.7e-06 Score=70.54 Aligned_cols=45 Identities=9% Similarity=-0.042 Sum_probs=36.9
Q ss_pred CCCcEEEEEeCCCCcc-chhhhHHHHHHHHHhcC--CCcEEEEEEeCC
Q 021368 177 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRG--VDSIVIAKMDGT 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~-C~~~~~~~~~la~~~~~--~~~v~~~~vd~~ 221 (313)
.+++++|+||++||++ |...++.+.++...+.. ..++.++.|+++
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D 87 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD 87 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC
Confidence 4789999999999998 99999999998887753 125777777766
No 357
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.18 E-value=1.4e-05 Score=62.90 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=71.8
Q ss_pred CCccEEEEEeeC-Cc-hhhhhHHHHHHHHhcc-----CeEEEEEEeCCCccc-------------------------ccc
Q 021368 49 PIKNQLLLFAVS-ND-SEKLLPVFEEAAKSFK-----GKLIFVYVQMDNEDV-------------------------GKP 96 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~-c~~~~~~~~~~a~~~~-----~~v~f~~vd~~~~~~-------------------------~~~ 96 (313)
++..+|.||+.| ++ |....|.|.++..++. ..+.|+.|+++...+ ...
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 456778899999 87 9999999999999995 359999998874210 125
Q ss_pred hhhhhCCCCCCCc---------------EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 97 VSEYFGITGEAPK---------------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 97 l~~~~~v~~~~~P---------------~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+++.|||... | ++++++.++.....+.|..+.+.|.+.+.+.+.
T Consensus 106 ~~~~~~v~~~--p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 106 ASHSYRVYYN--AGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHSCCCCE--ECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHhCeEEE--ecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 7888999876 5 777776655555667888999999999998875
No 358
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.17 E-value=7.5e-06 Score=64.02 Aligned_cols=93 Identities=10% Similarity=0.055 Sum_probs=72.4
Q ss_pred CCCccEEEEEeeC-Cc-hhhhhHHHHHHHHhccC-----eEEEEEEeCCCccc-------------------------cc
Q 021368 48 SPIKNQLLLFAVS-ND-SEKLLPVFEEAAKSFKG-----KLIFVYVQMDNEDV-------------------------GK 95 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~-c~~~~~~~~~~a~~~~~-----~v~f~~vd~~~~~~-------------------------~~ 95 (313)
.++..+|.||+.| ++ |....|.+.++..++.+ .+.|+.|+++...+ ..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3457788899999 87 99999999999999863 68888988875211 12
Q ss_pred chhhhhCCCCCCCc---------------EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 96 PVSEYFGITGEAPK---------------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 96 ~l~~~~~v~~~~~P---------------~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
.+++.|||... | ++++++.++.....+.|..+.+.|.+.+.+.+.
T Consensus 102 ~~~~~~~v~~~--p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYS--PGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEE--EEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEE--ecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 47788999877 6 666776655555667888899999999998864
No 359
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.16 E-value=5.6e-06 Score=65.23 Aligned_cols=68 Identities=12% Similarity=0.101 Sum_probs=56.6
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccC--eEEEEEEeCCCccc---------------------ccchhhhhCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG--KLIFVYVQMDNEDV---------------------GKPVSEYFGI 103 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~--~v~f~~vd~~~~~~---------------------~~~l~~~~~v 103 (313)
.++..+|.||++| ++|+...|.|.+++.++.+ .+.|+.|+++.... ...+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 3557788899999 9999999999999999985 68888888876420 1588999999
Q ss_pred CCCCCcEEEEEcCC
Q 021368 104 TGEAPKVLAYTGND 117 (313)
Q Consensus 104 ~~~~~P~i~~~~~~ 117 (313)
.++ |++++++.+
T Consensus 127 ~~~--Pt~~lid~~ 138 (165)
T 3s9f_A 127 ESI--PTLIGLNAD 138 (165)
T ss_dssp CSS--SEEEEEETT
T ss_pred CCC--CEEEEEeCC
Confidence 988 999999864
No 360
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.16 E-value=5.1e-06 Score=68.90 Aligned_cols=87 Identities=11% Similarity=0.091 Sum_probs=64.4
Q ss_pred CCCcEEEEEeC-CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------------------------------
Q 021368 177 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 225 (313)
Q Consensus 177 ~~k~~lv~fy~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------------------------------ 225 (313)
.+++++|+||+ +||++|....+.+.++..+|++. ++.++.|+++....
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR-NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 46899999996 99999999999999999999864 58888888774210
Q ss_pred ccCCCC------cCceEEEEe-CCCCCcCceeecc----CcCHHHHHHHHHhc
Q 021368 226 HRAKSD------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKN 267 (313)
Q Consensus 226 ~~~~v~------~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~ 267 (313)
..|++. .+|+++++. +|..+. .+.| ....+.+++.|...
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~---~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQ---ITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEE---EEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHh
Confidence 346776 789999995 455432 3333 23577888888754
No 361
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.16 E-value=3.7e-06 Score=78.87 Aligned_cols=122 Identities=9% Similarity=-0.002 Sum_probs=89.4
Q ss_pred CcccccCCCCCCHHHHHHHHHhc--CCCceEEeCCCcccccccC-CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEE
Q 021368 7 EKISYFADGKFDKSTIADFVFSN--KLPLVTIFTRENAPSVFES-PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLI 82 (313)
Q Consensus 7 ~~~~~y~~g~~~~~~l~~fi~~~--~~~~v~~lt~~~~~~~~~~-~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~ 82 (313)
...+.| +|==.=+++.+|+..- ....-..++++.++.+... ....++.|+++| ++|+.+.|.+.+++..+. .+.
T Consensus 73 ~~~i~f-~g~p~g~e~~s~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~ 150 (521)
T 1hyu_A 73 QQGPRF-AGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIK 150 (521)
T ss_dssp CCSCEE-ESCCCGGGHHHHHHHHHHHTTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEE
T ss_pred cceEEE-eccCcchhHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceE
Confidence 345778 6665556666666532 1222346677777666433 224466788999 999999999999999987 599
Q ss_pred EEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 83 FVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 83 f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
|..+|.+. +++++.+|||.+. |++++ +++ . ...|..+.+.|.+++...
T Consensus 151 ~~~vd~~~---~~~~~~~~~i~sv--Pt~~i--~g~--~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 151 HTAIDGGT---FQNEITERNVMGV--PAVFV--NGK--E-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEETTT---CHHHHHHTTCCSS--SEEEE--TTE--E-EEESCCCHHHHHHHHCCS
T ss_pred EEEEechh---hHHHHHHhCCCcc--CEEEE--CCE--E-EecCCCCHHHHHHHHhhc
Confidence 99999988 6799999999998 99966 332 2 234889999999998664
No 362
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.14 E-value=4.2e-06 Score=63.98 Aligned_cols=66 Identities=15% Similarity=0.158 Sum_probs=55.2
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhcc--CeEEEEEEeCCCcc---------------------cccchhhhhCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK--GKLIFVYVQMDNED---------------------VGKPVSEYFGI 103 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~--~~v~f~~vd~~~~~---------------------~~~~l~~~~~v 103 (313)
.++..+|.||++| ++|+...|.|.+++.++. +.+.|+.|+++... .+..+++.|||
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 3457788899999 999999999999999998 46888999887631 13578899999
Q ss_pred CCCCCcEEEEEc
Q 021368 104 TGEAPKVLAYTG 115 (313)
Q Consensus 104 ~~~~~P~i~~~~ 115 (313)
.++ |++++++
T Consensus 107 ~~~--Pt~~lid 116 (144)
T 1o73_A 107 ESI--PTLITIN 116 (144)
T ss_dssp CSS--SEEEEEE
T ss_pred CCC--CEEEEEE
Confidence 988 9999998
No 363
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.14 E-value=3.7e-06 Score=66.84 Aligned_cols=81 Identities=11% Similarity=0.094 Sum_probs=61.1
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc---------------------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN--------------------------------- 223 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~--------------------------------- 223 (313)
+.+.+++.|+++||++|..+.+.+.++...+.. +.+...+....
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~ 97 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN---VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGK 97 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC---EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Confidence 357899999999999999999999999887543 55555443211
Q ss_pred --------------------------------------ccccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHH
Q 021368 224 --------------------------------------EHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLK 265 (313)
Q Consensus 224 --------------------------------------~~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~ 265 (313)
....++|.++|++++ +|. .+.|..+.+.|.+.|.
T Consensus 98 ~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~------~~~G~~~~~~l~~~i~ 169 (175)
T 3gyk_A 98 ANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA------LVPGFVEQSQLQDAVD 169 (175)
T ss_dssp CSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE------EECSCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE------EeeCCCCHHHHHHHHH
Confidence 003568999999988 442 6778889999999987
Q ss_pred hcC
Q 021368 266 KNA 268 (313)
Q Consensus 266 ~~~ 268 (313)
+.+
T Consensus 170 ~~l 172 (175)
T 3gyk_A 170 RAR 172 (175)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 364
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.14 E-value=7e-06 Score=64.61 Aligned_cols=85 Identities=13% Similarity=0.139 Sum_probs=60.6
Q ss_pred CCCcEEEEEeCCC-CccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc----------------------c---ccCCC
Q 021368 177 ESKDVLLEIYAPW-CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------H---HRAKS 230 (313)
Q Consensus 177 ~~k~~lv~fy~~~-C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~----------------------~---~~~~v 230 (313)
.+++++|+||++| |++|....+.+.++..++ . ++.++.++.+... . ..|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC
Confidence 4689999999999 999999999999999999 3 5777777776411 0 23555
Q ss_pred Cc------CceEEEEe-CCCCCcCceeecc-----CcCHHHHHHHHHhc
Q 021368 231 DG------FPTILFFP-AGNKSFDPINVDV-----DRTVVALYKFLKKN 267 (313)
Q Consensus 231 ~~------~P~i~~~~-~g~~~~~~~~y~g-----~~~~~~l~~fi~~~ 267 (313)
.. .|+++++. +|..+. .+.| ..+.+.+++.|++.
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~---~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVY---AEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEE---EEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEE---EEecCCcCCCCCHHHHHHHHHHh
Confidence 54 49888885 555442 3433 23457788888765
No 365
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.12 E-value=1.2e-05 Score=63.65 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=66.7
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCC--------cccccchh-------------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVS------------------- 98 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~--------~~~~~~l~------------------- 98 (313)
.++.++|.||+.| +.|. ..|.|.+++.++.+. +.|+.|+++. ......++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 4557788899999 9999 999999999999875 8888887741 00012222
Q ss_pred -----------hhhCCCCCCCc------EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 99 -----------EYFGITGEAPK------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 99 -----------~~~~v~~~~~P------~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+.+|+.+. | +.++++.++.....+.|..+.+.|.+.|.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~--P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGL--RGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSC--CSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred cchHHHHHHHhccCCcCCC--CcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 13577777 7 666776655556667888899999999998875
No 366
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.10 E-value=1.3e-06 Score=59.95 Aligned_cols=70 Identities=6% Similarity=0.036 Sum_probs=50.0
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-----ccCCCCcCceEEEEeCCCCCcCceeeccCcC
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----HRAKSDGFPTILFFPAGNKSFDPINVDVDRT 256 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-----~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~ 256 (313)
+++|+++||++|+.+.+.+.+. ++.+..+|++.+.. ..+++.++|+++ .+|. .. +..+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~------~~-~g~~ 65 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDL------SW-SGFR 65 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTE------EE-ESCC
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCE------EE-ecCC
Confidence 6789999999999999988764 35667788887643 247899999984 3443 22 3356
Q ss_pred HHHHHHHHHhcC
Q 021368 257 VVALYKFLKKNA 268 (313)
Q Consensus 257 ~~~l~~fi~~~~ 268 (313)
.+.|.++|.+++
T Consensus 66 ~~~l~~~l~~~~ 77 (81)
T 1h75_A 66 PDMINRLHPAPH 77 (81)
T ss_dssp HHHHGGGSCCC-
T ss_pred HHHHHHHHhccc
Confidence 777877776554
No 367
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.10 E-value=3.5e-06 Score=69.38 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=57.4
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC----------------------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------------------- 222 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~---------------------------------- 222 (313)
+.+.+++.|+++||++|+.+.+.+.++... ++.+..+....
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~-----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~ 159 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL-----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPK 159 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCC
Confidence 467899999999999999999999887642 24443332210
Q ss_pred -----cc-------cccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 223 -----NE-------HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 223 -----~~-------~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
.. ...++++++|++++ .+|. .+.|..+.+.|.++|.+.
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~------~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 160 EVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE------LIGGYLKPADLLRALEET 209 (211)
T ss_dssp SCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC------CCCSCCCHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE------EecCCCCHHHHHHHHHhc
Confidence 00 04679999999988 5664 466878899999999764
No 368
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.09 E-value=5.8e-06 Score=64.79 Aligned_cols=88 Identities=10% Similarity=0.030 Sum_probs=62.3
Q ss_pred CCCcEEEEEeC-CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-----------------------ccCCCCc
Q 021368 177 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----------------------HRAKSDG 232 (313)
Q Consensus 177 ~~k~~lv~fy~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-----------------------~~~~v~~ 232 (313)
.+++++|+||+ +||++|...++.+.++..++++. ++.+..|.++.... ..|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 112 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA-GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIK 112 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcc
Confidence 36799999998 99999999999999999999754 47777777663111 2345555
Q ss_pred ------------CceEEEEe-CCCCCcCceeecc---CcCHHHHHHHHHhcC
Q 021368 233 ------------FPTILFFP-AGNKSFDPINVDV---DRTVVALYKFLKKNA 268 (313)
Q Consensus 233 ------------~P~i~~~~-~g~~~~~~~~y~g---~~~~~~l~~fi~~~~ 268 (313)
.|+++++. +|..+. .+.+ ....+.+++.|++..
T Consensus 113 ~~~~~~~~~~~~~p~~~lid~~G~i~~---~~~~~~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 113 EKNMYGKQVLGIERSTFLLSPEGQVVQ---AWRKVKVAGHADAVLAALKAHA 161 (163)
T ss_dssp EEEETTEEEEEECCEEEEECTTSCEEE---EECSCCSTTHHHHHHHHHHHHC
T ss_pred ccccccccccCcceEEEEECCCCeEEE---EEcCCCcccCHHHHHHHHHHHh
Confidence 89999995 455432 3333 234577888887653
No 369
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.04 E-value=1.8e-05 Score=63.73 Aligned_cols=93 Identities=11% Similarity=-0.005 Sum_probs=69.2
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCc--------ccccchh-hh----------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------DVGKPVS-EY---------------- 100 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~--------~~~~~l~-~~---------------- 100 (313)
.++.++|.||+.| +.|....|.|.++..+|.++ +.|+.|+++.. ....+++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 4557788899999 99999999999999999875 99999988720 0012223 22
Q ss_pred -------------hCCCCCCCc------EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 101 -------------FGITGEAPK------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 101 -------------~~v~~~~~P------~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+++.+. | +.++++.++.....+.|..+.+.|.+.|.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~--P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKT--KAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGC--CSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCC--ccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 366656 6 666776655556667888999999999999876
No 370
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.03 E-value=1.8e-05 Score=62.13 Aligned_cols=93 Identities=11% Similarity=0.025 Sum_probs=68.3
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCC--------cccccchhh-hh---------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVSE-YF--------------- 101 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~--------~~~~~~l~~-~~--------------- 101 (313)
.++.++|.||+.| +.|....|.+.+++.++.++ +.|+.|+++. ......+++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4557788899999 99999999999999999875 9999998863 000122333 32
Q ss_pred --------------CC--CCCCCc---EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 102 --------------GI--TGEAPK---VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 102 --------------~v--~~~~~P---~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
|+ .+. | +.++++.++...+.+.|..+.+.|.+.|.+.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~--p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDI--QWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCC--CSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred chHHHHHHHHhcCCCccCCcc--cccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 344 6 666776655556667888899999999998865
No 371
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=1.7e-06 Score=65.56 Aligned_cols=85 Identities=11% Similarity=0.123 Sum_probs=53.0
Q ss_pred cChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc---c-----c-ccCCCCcCceEEE
Q 021368 168 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---E-----H-HRAKSDGFPTILF 238 (313)
Q Consensus 168 ~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~---~-----~-~~~~v~~~P~i~~ 238 (313)
+.+.+.+.. . . +++|+++||++|+.+.+.+.++. +.+..+|++.. . . ..+++.++|++++
T Consensus 18 ~~~~~~i~~-~-~-vvvf~~~~Cp~C~~~~~~L~~~~--------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~i 86 (130)
T 2cq9_A 18 NQIQETISD-N-C-VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 86 (130)
T ss_dssp HHHHHHHHH-S-S-EEEEECSSCSHHHHHHHHHHHHT--------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEEE
T ss_pred HHHHHHHcC-C-c-EEEEEcCCChHHHHHHHHHHHcC--------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEEE
Confidence 344554432 2 3 44599999999999999998863 33445666654 2 1 3568899999853
Q ss_pred EeCCCCCcCceeec---cCcCHHHHHHHHHhcC
Q 021368 239 FPAGNKSFDPINVD---VDRTVVALYKFLKKNA 268 (313)
Q Consensus 239 ~~~g~~~~~~~~y~---g~~~~~~l~~fi~~~~ 268 (313)
+|..+. .+. +......|.++|....
T Consensus 87 --~G~~ig---g~~~l~~~~~~~~L~~~L~~~g 114 (130)
T 2cq9_A 87 --NGTFIG---GATDTHRLHKEGKLLPLVHQCY 114 (130)
T ss_dssp --TTEEEE---EHHHHHHHHHHTSSHHHHHHHS
T ss_pred --CCEEEc---ChHHHHHHHHcCcHHHHHHHcC
Confidence 655432 221 2223456778887763
No 372
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.02 E-value=2.8e-05 Score=61.76 Aligned_cols=86 Identities=16% Similarity=0.178 Sum_probs=58.4
Q ss_pred CCCcEEEEEeCCC-CccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc----------------------cc--ccCCCC
Q 021368 177 ESKDVLLEIYAPW-CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN----------------------EH--HRAKSD 231 (313)
Q Consensus 177 ~~k~~lv~fy~~~-C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~----------------------~~--~~~~v~ 231 (313)
.+++++|+||++| |++|....+.+.++..+ . ++.++.|+.+.. .. ..|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCc
Confidence 4689999999999 99999999999999988 2 577777776521 00 356666
Q ss_pred cC---------ceEEEEe-CCCCCcCceeecc-----CcCHHHHHHHHHhcCC
Q 021368 232 GF---------PTILFFP-AGNKSFDPINVDV-----DRTVVALYKFLKKNAS 269 (313)
Q Consensus 232 ~~---------P~i~~~~-~g~~~~~~~~y~g-----~~~~~~l~~fi~~~~~ 269 (313)
.. |+.+++. +|..+. .+.| ..+.+.+++.+.+..+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~---~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAY---TELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEE---EEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred ccccccCCcccceEEEECCCCeEEE---EEECCCcCCCCCHHHHHHHHHhhcC
Confidence 65 8888885 555432 3332 2356666666665543
No 373
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=97.98 E-value=5.6e-05 Score=59.23 Aligned_cols=96 Identities=13% Similarity=0.006 Sum_probs=67.3
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCc--------ccccchh-hhh---------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------DVGKPVS-EYF--------------- 101 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~--------~~~~~l~-~~~--------------- 101 (313)
.++.++|.||+.| ++|....|.+.++..++.+. +.|+.|+++.. .....++ +.+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4557788899999 99999999999999999874 99999988631 0012221 222
Q ss_pred --------------CCCCC---CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 102 --------------GITGE---APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 102 --------------~v~~~---~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
|+.+. ..|+.++++.++.....+.|..+.+.|.+.|.+.+..
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 168 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLEK 168 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHHC
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 32211 1166667766555556678888899999999988763
No 374
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.98 E-value=2.4e-05 Score=64.79 Aligned_cols=88 Identities=11% Similarity=0.100 Sum_probs=62.6
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------------------------------
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 225 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------------------------------ 225 (313)
.+++++|+|| ++||++|...++.+.++..+|++. ++.++.|.++....
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK-NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH
Confidence 4689999999 999999999999999999998643 57777777654211
Q ss_pred ccCCC-----CcCceEEEEeC-CCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 226 HRAKS-----DGFPTILFFPA-GNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 226 ~~~~v-----~~~P~i~~~~~-g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
..|++ ...|+++++.. |..+. .+.| ..+.+.|++.|.+..
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~---~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRH---QTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHh
Confidence 12355 25799999954 44432 2333 356788888887764
No 375
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.98 E-value=1.4e-05 Score=53.76 Aligned_cols=67 Identities=10% Similarity=0.153 Sum_probs=49.4
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--c---cCCCCcCceEEEEeCCCCCcCceeeccCcC
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H---RAKSDGFPTILFFPAGNKSFDPINVDVDRT 256 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~---~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~ 256 (313)
+++|+++||++|+.+.+.+.++ ++.+..+|++.+.. . .+++.++|+++. +|. .+.| .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~------~~~g-~~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGE------HWSG-FR 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTE------EEES-CC
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCe------EEcC-CC
Confidence 6789999999999999988765 35666778877643 3 688999999874 443 2333 57
Q ss_pred HHHHHHHHH
Q 021368 257 VVALYKFLK 265 (313)
Q Consensus 257 ~~~l~~fi~ 265 (313)
.+.|.++|.
T Consensus 66 ~~~l~~~l~ 74 (75)
T 1r7h_A 66 PERIKQLQA 74 (75)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 788888773
No 376
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=97.97 E-value=1.8e-05 Score=60.44 Aligned_cols=87 Identities=10% Similarity=0.097 Sum_probs=64.4
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCccc-----------------------ccchhhhhC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDV-----------------------GKPVSEYFG 102 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~~-----------------------~~~l~~~~~ 102 (313)
.++..+|.||+.| ++|....|.+.++..+|.+ .+.|+.|+++.... ...+++.||
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 3457788899999 8899999999999999985 48888888874210 135778899
Q ss_pred CCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHH
Q 021368 103 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGED 139 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~ 139 (313)
|.+. |+.++++.++..... ....+++.+++.+
T Consensus 111 v~~~--P~~~lid~~G~i~~~---~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 111 LRKG--FKNFLINDEGVIIAA---NVTPEKLTEILKA 142 (143)
T ss_dssp GGGC--CCEEEECTTSBEEEE---SCCHHHHHHHHTC
T ss_pred CCCC--CcEEEECCCCEEEEc---cCCHHHHHHHHHh
Confidence 9988 888788755433222 2467777777654
No 377
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.94 E-value=3.2e-05 Score=62.12 Aligned_cols=94 Identities=9% Similarity=-0.021 Sum_probs=66.7
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCC--------cccccchhh-h----------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVSE-Y---------------- 100 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~--------~~~~~~l~~-~---------------- 100 (313)
.++.++|.||+.| ++|....|.|.++..+|+++ +.|+.|.++. ......+++ .
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4557788899999 99999999999999999875 8888888762 000111111 1
Q ss_pred ----------------hCCCCCCCc---EEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 101 ----------------FGITGEAPK---VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 101 ----------------~~v~~~~~P---~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
+|+... | +.++++.++.....+.|..+.+.|.+.|.+.+.+
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~i--P~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAI--KWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSC--CSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred chhHHHHHHHhhcCCccCCCcc--ccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 133333 5 7777766655566678889999999999998764
No 378
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.94 E-value=3.6e-05 Score=60.16 Aligned_cols=90 Identities=13% Similarity=0.218 Sum_probs=65.3
Q ss_pred CCc-cEEEEE-eeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcc------------------cccchhhhhCCCC-
Q 021368 49 PIK-NQLLLF-AVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED------------------VGKPVSEYFGITG- 105 (313)
Q Consensus 49 ~~~-~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~------------------~~~~l~~~~~v~~- 105 (313)
++. .+|.|| +.| +.|....|.|.+++.+|.+. +.|+.|+++... ....+++.||+.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 334 777899 999 99999999999999999864 888888886210 1458889999998
Q ss_pred ---CCCcEEEEEcCCCCceeccCCC----CCHHHHHHHHHHH
Q 021368 106 ---EAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDF 140 (313)
Q Consensus 106 ---~~~P~i~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~ 140 (313)
. |++++++.++...+.+.|. ...+.+.+.+.+.
T Consensus 108 ~~~~--P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 108 ILPA--RITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp SSCC--CEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred Cccc--ceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 6 9888887665555555562 2344555555443
No 379
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=97.94 E-value=1.2e-05 Score=63.39 Aligned_cols=90 Identities=11% Similarity=0.128 Sum_probs=67.8
Q ss_pred CCCccEEEEEeeC-Cc-hhhhhHHHHHHHHhccC----eEEEEEEeCCCcccc-------------------------cc
Q 021368 48 SPIKNQLLLFAVS-ND-SEKLLPVFEEAAKSFKG----KLIFVYVQMDNEDVG-------------------------KP 96 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~-c~~~~~~~~~~a~~~~~----~v~f~~vd~~~~~~~-------------------------~~ 96 (313)
.++.++|.||+.| ++ |....|.+.++..++.+ .+.|+.|+++...+. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3457788899999 87 99999999999999984 599999998753111 25
Q ss_pred hhhhhCC---------------CCCCCcEEEEEcCCCCceeccCCCC--CHHHHHHHHHHH
Q 021368 97 VSEYFGI---------------TGEAPKVLAYTGNDDAKKHILDGEL--TLDKIKTFGEDF 140 (313)
Q Consensus 97 l~~~~~v---------------~~~~~P~i~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~ 140 (313)
+++.||+ ... |++++++ ++.....+.|.. +.+.|.+.|.+.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~--P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHT--ATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEEC--CCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecC--CEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 6666665 344 8888888 554555667766 888998888764
No 380
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.91 E-value=5.4e-06 Score=56.81 Aligned_cols=58 Identities=12% Similarity=0.087 Sum_probs=46.3
Q ss_pred cEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEE
Q 021368 52 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAY 113 (313)
Q Consensus 52 ~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~ 113 (313)
.+++|+++| ++|+.+.+.+.+++.++...+.+..||.+. . ..++++++|+++. |++++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~-~-~~~~~~~~gv~~v--Pt~~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDK-A-RIAEAEKAGVKSV--PALVI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCS-S-THHHHHHHTCCEE--EEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCh-h-hHHHHHHcCCCcC--CEEEE
Confidence 367899999 999999999999988876566666666531 1 5688899999988 99866
No 381
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.91 E-value=1.6e-05 Score=59.42 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=71.5
Q ss_pred EEeC-CCcccccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEE
Q 021368 35 TIFT-RENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 112 (313)
Q Consensus 35 ~~lt-~~~~~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~ 112 (313)
..|+ .+.++.++......+|-||.+| ++| .+.|.++|..+ +.+.|+.++. ..+++.+++. . |++.
T Consensus 24 ~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~~------~~v~~~~~v~-~--~~vv 90 (124)
T 2l4c_A 24 TWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGISTD------SEVLTHYNIT-G--NTIC 90 (124)
T ss_dssp EECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEECC------HHHHHHTTCC-S--SCEE
T ss_pred eEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEECh------HHHHHHcCCC-C--CeEE
Confidence 3353 3556666766666677799987 666 78999999999 6699998864 3789999997 4 8888
Q ss_pred EEcCCCCceeccCC----CCCHHHHHHHHHHH
Q 021368 113 YTGNDDAKKHILDG----ELTLDKIKTFGEDF 140 (313)
Q Consensus 113 ~~~~~~~~~~~~~g----~~~~~~i~~fi~~~ 140 (313)
+|+........|.| ..+.+.|.+||...
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 88876555566775 78999999999864
No 382
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.89 E-value=3.6e-05 Score=62.24 Aligned_cols=93 Identities=11% Similarity=0.174 Sum_probs=71.6
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCc----------------------ccccchhhhhCC
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNE----------------------DVGKPVSEYFGI 103 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~----------------------~~~~~l~~~~~v 103 (313)
++..+|.|| +.| +.|....|.|.+++.+|.+ .+.|+.|+.+.. +....+++.||+
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 456778899 999 9999999999999999986 488999988641 013468889999
Q ss_pred C-----CCCCcEEEEEcCCCCceeccCCC----CCHHHHHHHHHHHhcC
Q 021368 104 T-----GEAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLEG 143 (313)
Q Consensus 104 ~-----~~~~P~i~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~~ 143 (313)
. .. |++++++.++...+.+.|. .+.+.|.+.+.++..+
T Consensus 125 ~~~~g~~~--P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~ 171 (195)
T 2bmx_A 125 LNADGVAD--RVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSD 171 (195)
T ss_dssp BCTTSSBC--EEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC-
T ss_pred cccCCCcc--ceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhC
Confidence 8 77 9988887665444444443 3789999999998764
No 383
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.12 E-value=1.6e-06 Score=67.63 Aligned_cols=92 Identities=10% Similarity=0.023 Sum_probs=62.5
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHH-HHHhcc--CeEEEEEEeCCCcc-cccchh------------------hhhC--
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEE-AAKSFK--GKLIFVYVQMDNED-VGKPVS------------------EYFG-- 102 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~-~a~~~~--~~v~f~~vd~~~~~-~~~~l~------------------~~~~-- 102 (313)
.++.++|.||++| ++|+...|.|.+ +..++. ..+.|+.|++++.. ....++ +.||
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 3457788899999 999999999998 888887 35889999887632 022222 2333
Q ss_pred CCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 103 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 103 v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
+.++ |++++++.++...+.+.| .+.+.+.+++.++..
T Consensus 112 ~~~~--P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 112 DAGI--TRNVLIDREGKIVKLTRL-YNEEEFASLVQQINE 148 (159)
Confidence 3445 888888655433444445 566677777777654
No 384
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.88 E-value=3.6e-05 Score=59.99 Aligned_cols=41 Identities=7% Similarity=0.114 Sum_probs=33.6
Q ss_pred CcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 021368 179 KDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 221 (313)
Q Consensus 179 k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~ 221 (313)
++++|+|| +.||++|...++.+.++..++++.. .+..|.++
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--~vv~is~d 77 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA--AVFGLSAD 77 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC--EEEEEESC
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC--cEEEEeCC
Confidence 47888887 8999999999999999999998653 55556554
No 385
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.88 E-value=1.5e-06 Score=64.20 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=50.9
Q ss_pred CcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-------c--ccCCCCcCceEEEEeCCCCCcCce
Q 021368 179 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------H--HRAKSDGFPTILFFPAGNKSFDPI 249 (313)
Q Consensus 179 k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~-------~--~~~~v~~~P~i~~~~~g~~~~~~~ 249 (313)
...++.|+++||++|+.+.+.+.+++... +. +..+|++.+. . ..+++.++|++++ +|..+.
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ig--- 87 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKR---GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSIG--- 87 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCT---TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEEE---
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCc---Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEEe---
Confidence 34678899999999999998887653221 11 6667777663 1 4678999998754 555432
Q ss_pred eecc---CcCHHHHHHHHHhcC
Q 021368 250 NVDV---DRTVVALYKFLKKNA 268 (313)
Q Consensus 250 ~y~g---~~~~~~l~~fi~~~~ 268 (313)
.+.+ ......|.++|.+..
T Consensus 88 g~~~~~~~~~~~~L~~~L~~~g 109 (114)
T 2hze_A 88 GYSDLLEIDNMDALGDILSSIG 109 (114)
T ss_dssp SHHHHHHHHHTTCHHHHHHHTT
T ss_pred CcHHHHHHHHCChHHHHHHHcC
Confidence 2221 112345777776653
No 386
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.86 E-value=2.3e-05 Score=65.76 Aligned_cols=85 Identities=11% Similarity=0.159 Sum_probs=60.0
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC----------------------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------------------- 222 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~---------------------------------- 222 (313)
+.+.+++.|+++||++|+.+.+.+..+... + ++.+..+....
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g--~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l 171 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G--KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKL 171 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T--SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C--cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCC
Confidence 356789999999999999999998887653 2 46666554421
Q ss_pred ---------c--c-------cccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 223 ---------N--E-------HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 223 ---------~--~-------~~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
. . ...+++.++|++++...+... ..+.|..+.+.|.++|.+.+
T Consensus 172 ~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~---~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 172 NVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL---QQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE---EEEESSCCHHHHHHHTTC--
T ss_pred CccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE---EEecCCCCHHHHHHHHHHHH
Confidence 0 0 035689999999998632221 16778889999999987664
No 387
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.85 E-value=3.8e-06 Score=60.80 Aligned_cols=77 Identities=12% Similarity=0.087 Sum_probs=48.8
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc--------c-ccCCCCcCceEEEEeCCCCCcCceee
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------H-HRAKSDGFPTILFFPAGNKSFDPINV 251 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~--------~-~~~~v~~~P~i~~~~~g~~~~~~~~y 251 (313)
.+++|+++||++|+.+.+.+.+++..+. . +..+|++.+. . ..+++.++|+++ .+|..+. .+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~--~~g~~i~---g~ 82 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---L--LEFVDITATSDTNEIQDYLQQLTGARTVPRVF--IGKECIG---GC 82 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE--ETTEEEE---SH
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE--ECCEEEe---cc
Confidence 4777999999999999999987654321 2 4445665542 1 457889999974 3665432 22
Q ss_pred cc---CcCHHHHHHHHHhc
Q 021368 252 DV---DRTVVALYKFLKKN 267 (313)
Q Consensus 252 ~g---~~~~~~l~~fi~~~ 267 (313)
.. ......|.++|...
T Consensus 83 ~~~~~~~~~g~L~~~l~~~ 101 (105)
T 1kte_A 83 TDLESMHKRGELLTRLQQV 101 (105)
T ss_dssp HHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHc
Confidence 21 12245677777654
No 388
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=97.83 E-value=4.1e-05 Score=61.15 Aligned_cols=92 Identities=3% Similarity=0.011 Sum_probs=65.2
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCc--------ccccchhhh-hC--------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------DVGKPVSEY-FG-------------- 102 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~--------~~~~~l~~~-~~-------------- 102 (313)
.++.++|.||+.| +.|....|.|.+++.+|.++ +.|+.|+++.. .....++++ ++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4557788899999 99999999999999999875 99999988631 102233443 33
Q ss_pred ---------CCCCCCc-------EEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 103 ---------ITGEAPK-------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 103 ---------v~~~~~P-------~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
+... | +.++++.++.....+.|..+.+.|.+.|.+.+
T Consensus 128 ~~~~~~~~~~~~~--P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 128 GAHPAFKYLAQTS--GKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TSCHHHHHHHHHH--SCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cchhhhhhhhhcC--CCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 2233 5 55566555545556778888899988887754
No 389
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.80 E-value=1.6e-05 Score=64.20 Aligned_cols=42 Identities=26% Similarity=0.484 Sum_probs=36.3
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 220 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~ 220 (313)
+.+++++.|+++||++|..+.+.+.++...+.. .+.+..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEeh
Confidence 467899999999999999999999999988876 577776665
No 390
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.80 E-value=0.00017 Score=55.51 Aligned_cols=110 Identities=11% Similarity=0.093 Sum_probs=78.0
Q ss_pred CCeEEEcCcChHHHhhcCCCcEEEE-EeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC--Cccc--ccCCCCc--
Q 021368 160 GDVKIVVGNNFDEIVLDESKDVLLE-IYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT--TNEH--HRAKSDG-- 232 (313)
Q Consensus 160 ~~v~~l~~~~f~~~l~~~~k~~lv~-fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~--~~~~--~~~~v~~-- 232 (313)
+.|..++.++..++. ..+-+..++ |....-..-..+.+.+.++|..+++ .+.|+.+|.+ .+.. ..|+++.
T Consensus 14 PLV~e~t~en~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg--ki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIF-GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHH-SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT--TCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHh-cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC--ceEEEEEecchHhHHHHHHHcCCCccc
Confidence 578999999988875 455555444 4433333345678899999999987 7999999983 3322 5788875
Q ss_pred CceEEEEeC-CCCCcCceeec-cCcCHHHHHHHHHhcCCCCccc
Q 021368 233 FPTILFFPA-GNKSFDPINVD-VDRTVVALYKFLKKNASIPFKI 274 (313)
Q Consensus 233 ~P~i~~~~~-g~~~~~~~~y~-g~~~~~~l~~fi~~~~~~~~~~ 274 (313)
+|++.++.. +... + ..+. +..+.+.|.+|+.+.+.-+++.
T Consensus 91 ~P~v~i~~~~~~~~-K-y~~~~~~~t~~~i~~Fv~d~l~GkL~p 132 (147)
T 3bj5_A 91 CPAVRLITLEEEMT-K-YKPESEELTAERITEFCHRFLEGKIKP 132 (147)
T ss_dssp CSEEEEEECSSSCE-E-ECCSCCCCCHHHHHHHHHHHHTTCSCE
T ss_pred CCEEEEEecccccc-c-CCCCcccCCHHHHHHHHHHHHcCCccc
Confidence 899999875 3321 1 1333 6788999999999998776643
No 391
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.80 E-value=1.2e-05 Score=57.75 Aligned_cols=79 Identities=10% Similarity=0.029 Sum_probs=59.8
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 129 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~ 129 (313)
..+++|+++| ++|+.+.+.|++++.. +.|..+|.++.. ++++..++| ... |++ +. ++. .. ..+..+
T Consensus 17 ~~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~-~~el~~~~g-~~v--P~l-~~-~g~--~~-~~~g~~ 83 (100)
T 1wjk_A 17 PVLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLPE-NSTWYERYK-FDI--PVF-HL-NGQ--FL-MMHRVN 83 (100)
T ss_dssp CEEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSST-THHHHHHSS-SSC--SEE-EE-SSS--EE-EESSCC
T ss_pred CEEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCcc-hHHHHHHHC-CCC--CEE-EE-CCE--EE-EecCCC
Confidence 5677789999 9999999999876533 899999998322 678999999 888 987 33 333 22 245588
Q ss_pred HHHHHHHHHHHhc
Q 021368 130 LDKIKTFGEDFLE 142 (313)
Q Consensus 130 ~~~i~~fi~~~~~ 142 (313)
.+.|.+++.+++.
T Consensus 84 ~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 84 TSKLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987653
No 392
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=97.76 E-value=7.8e-05 Score=59.76 Aligned_cols=92 Identities=11% Similarity=0.007 Sum_probs=70.6
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCc----------------------ccccchhhhhCC
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNE----------------------DVGKPVSEYFGI 103 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~----------------------~~~~~l~~~~~v 103 (313)
++..+|.|| +.| +.|....+.|.+++.+|.+ .+.|+.|+++.. +....+++.||+
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 110 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDV 110 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCC
Confidence 456778899 999 9999999999999999985 488888888741 013468889999
Q ss_pred C------CCCCcEEEEEcCCCCceeccCCC----CCHHHHHHHHHHHhc
Q 021368 104 T------GEAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLE 142 (313)
Q Consensus 104 ~------~~~~P~i~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~ 142 (313)
. .. |++++++.++...+.+.|. .+.++|.+.+..+..
T Consensus 111 ~~~~~g~~~--P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 111 LNEETGLAD--RGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp EETTTTEEC--EEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CcCCCCcee--eEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 8 66 9998997665444444443 378899999988765
No 393
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.96 E-value=3.5e-06 Score=64.25 Aligned_cols=66 Identities=17% Similarity=0.268 Sum_probs=52.8
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhcc---CeEEEEEEeCCCcc----------------------cccchhhhhCCC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFK---GKLIFVYVQMDNED----------------------VGKPVSEYFGIT 104 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~---~~v~f~~vd~~~~~----------------------~~~~l~~~~~v~ 104 (313)
.++|.||++| ++|+...|.|.+++.+++ ..+.++.|+++... ....+++.|||.
T Consensus 28 ~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (143)
T 2lus_A 28 IIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGIT 107 (143)
Confidence 6788899999 999999999999999993 35888888877531 013788999999
Q ss_pred CCCCcEEEEEcCCC
Q 021368 105 GEAPKVLAYTGNDD 118 (313)
Q Consensus 105 ~~~~P~i~~~~~~~ 118 (313)
++ |++++++.++
T Consensus 108 ~~--P~~~lid~~G 119 (143)
T 2lus_A 108 GI--PALVIVKKDG 119 (143)
Confidence 88 9988887443
No 394
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=97.74 E-value=3.5e-05 Score=62.48 Aligned_cols=91 Identities=14% Similarity=0.193 Sum_probs=69.2
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcc-------------------------cccchhhh
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED-------------------------VGKPVSEY 100 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~-------------------------~~~~l~~~ 100 (313)
++..+|.|| +.| ++|....|.|.+++.+|.+. +.|+.|+++... ....+++.
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRD 112 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHH
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHH
Confidence 456778899 899 99999999999999999753 888888886410 13468899
Q ss_pred hCCC-----CCCCcEEEEEcCCCCceeccCCC----CCHHHHHHHHHHHh
Q 021368 101 FGIT-----GEAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFL 141 (313)
Q Consensus 101 ~~v~-----~~~~P~i~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~ 141 (313)
||+. .. |++++++.++.....+.|. .+.++|.+.+.+..
T Consensus 113 ~~v~~~~g~~~--P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 113 YDVLFEEAIAL--RGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp TTCEETTTEEC--EEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred hCCcccCCccc--ceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 9998 77 8888887665444444443 36889999988875
No 395
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=97.73 E-value=0.00012 Score=56.86 Aligned_cols=87 Identities=9% Similarity=0.011 Sum_probs=63.4
Q ss_pred ccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc--------------------cccchhhhhCCC---
Q 021368 51 KNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED--------------------VGKPVSEYFGIT--- 104 (313)
Q Consensus 51 ~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~--------------------~~~~l~~~~~v~--- 104 (313)
..+|.|| +.| ++|....+.|.+++.++.+ .+.|+.|+++... ....+++.||+.
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 6777888 999 9999999999999999975 4888888886411 045788999998
Q ss_pred -CCCCc--EEEEEcCCCCceeccCCCC----CHHHHHHHHHH
Q 021368 105 -GEAPK--VLAYTGNDDAKKHILDGEL----TLDKIKTFGED 139 (313)
Q Consensus 105 -~~~~P--~i~~~~~~~~~~~~~~g~~----~~~~i~~fi~~ 139 (313)
++ | ++++++.++...+.+.|.. ..+.+.+.+.+
T Consensus 118 ~~~--p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 118 AGI--ANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTE--ECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred CCC--eeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 77 6 6667766554444444543 45666666654
No 396
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.73 E-value=4.6e-05 Score=60.78 Aligned_cols=87 Identities=7% Similarity=-0.011 Sum_probs=60.0
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-----------------------ccCCCCc
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----------------------HRAKSDG 232 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-----------------------~~~~v~~ 232 (313)
.+++++|+|| +.||+.|...++.+.++..+++.. ++.+..|.++.... ..|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~-~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~ 128 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI-NATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIK 128 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT-TEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcc
Confidence 3678888888 999999999999999999999864 57777777664211 1234432
Q ss_pred ------------CceEEEEe-CCCCCcCceeecc---CcCHHHHHHHHHhc
Q 021368 233 ------------FPTILFFP-AGNKSFDPINVDV---DRTVVALYKFLKKN 267 (313)
Q Consensus 233 ------------~P~i~~~~-~g~~~~~~~~y~g---~~~~~~l~~fi~~~ 267 (313)
.|+.+++. +|..+. .+.+ ....+.+++.|++.
T Consensus 129 ~~~~~g~~~~~~~p~~~lID~~G~I~~---~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 129 EKTMYGRQVIGIERSTFLIGPTHRIVE---AWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EECCC--CEEEECCEEEEECTTSBEEE---EECSCCSTTHHHHHHHHHHHH
T ss_pred cccccCcccCCcceEEEEECCCCEEEE---EEcCCCCCCCHHHHHHHHHHH
Confidence 58888885 454432 3333 34467788877654
No 397
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.72 E-value=4.9e-05 Score=62.61 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=37.5
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~ 221 (313)
.+|++||+||++||++|. .++.+.++..+|++. ++.+..+.|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~-g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPY-GLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC-CeEEEEEEcc
Confidence 478999999999999999 788999999999764 5888888865
No 398
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.71 E-value=0.00016 Score=57.55 Aligned_cols=95 Identities=8% Similarity=0.039 Sum_probs=65.1
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCC--------cccccchhhh-hCCCCC----------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVSEY-FGITGE---------- 106 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~--------~~~~~~l~~~-~~v~~~---------- 106 (313)
.++.++|.|++.| +.|....|.|.+++.+|.++ +.++.|.++. .....+++++ +++..-
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4557788899999 99999999999999999875 8899998753 1113455555 554310
Q ss_pred --------------CCcE----EEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 107 --------------APKV----LAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 107 --------------~~P~----i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
..|+ .++++.++.....+.|..+.+.+.+.|.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 0243 44555554455567788887777777766654
No 399
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.70 E-value=0.00016 Score=57.10 Aligned_cols=90 Identities=8% Similarity=0.051 Sum_probs=63.7
Q ss_pred CCcEEEEEeCCCCc-cchhhhHHHHHHHHHhcCC-CcEEEEEEeCCCccc------------------------------
Q 021368 178 SKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH------------------------------ 225 (313)
Q Consensus 178 ~k~~lv~fy~~~C~-~C~~~~~~~~~la~~~~~~-~~v~~~~vd~~~~~~------------------------------ 225 (313)
+++++|+||++||+ .|...++.+.++..+++.. .++.+..|.++..+.
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 78999999999997 6999999999999999642 357777776652100
Q ss_pred ---ccCC---------CCcCceEEEEe-CCCCCcCceeecc-CcCHHHHHHHHHhcCCC
Q 021368 226 ---HRAK---------SDGFPTILFFP-AGNKSFDPINVDV-DRTVVALYKFLKKNASI 270 (313)
Q Consensus 226 ---~~~~---------v~~~P~i~~~~-~g~~~~~~~~y~g-~~~~~~l~~fi~~~~~~ 270 (313)
..|+ +...|+++++. +|..+. .|.| ..+.+.|.+.|.+.+..
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~---~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKD---YIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEE---EEESSSCCHHHHHHHHHHHTTC
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEE---EEeCCCCCHHHHHHHHHHhhcc
Confidence 1111 33457788885 444432 4566 57899999999988653
No 400
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.70 E-value=9.3e-05 Score=52.07 Aligned_cols=75 Identities=20% Similarity=0.351 Sum_probs=54.0
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--c---c--CCCCcCceEEEEeCCCCCcCceeecc
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H---R--AKSDGFPTILFFPAGNKSFDPINVDV 253 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~---~--~~v~~~P~i~~~~~g~~~~~~~~y~g 253 (313)
.++.|.++||++|......+.+. ++.+-.+|++.++. + + -+..++|++++ .+|. ...
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~--------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~------~l~- 68 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN--------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGS------TLT- 68 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSC------EEE-
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc--------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCE------EEe-
Confidence 47789999999999998887764 46677788887654 2 1 25678999765 3333 222
Q ss_pred CcCHHHHHHHHHhcCCCC
Q 021368 254 DRTVVALYKFLKKNASIP 271 (313)
Q Consensus 254 ~~~~~~l~~fi~~~~~~~ 271 (313)
..+..+|.++|.+.++..
T Consensus 69 ~~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 69 NPSADEVKAKLVKIAGLE 86 (92)
T ss_dssp SCCHHHHHHHHHHHHCCS
T ss_pred CCCHHHHHHHHHHhcCCc
Confidence 367888999999887653
No 401
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.69 E-value=0.00016 Score=57.67 Aligned_cols=93 Identities=9% Similarity=-0.050 Sum_probs=63.2
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCc--------ccccchhhhh----------------
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------DVGKPVSEYF---------------- 101 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~--------~~~~~l~~~~---------------- 101 (313)
.++.++|.||+.| +.|....|.|.+++.+|.++ +.|+.|+++.. .....+++.+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4557788899999 99999999999999999874 99999987620 0011122222
Q ss_pred ---------------CCCCC---CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 102 ---------------GITGE---APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 102 ---------------~v~~~---~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
|+.+. ..|++++++.++.....+.|..+.+.|.+.|.+.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 32210 1277777766655556678888888887776654
No 402
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.66 E-value=0.00013 Score=59.61 Aligned_cols=42 Identities=7% Similarity=-0.006 Sum_probs=36.9
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMD 89 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~ 89 (313)
.++.++|.||+.| ++|....|.|.+++.+|.+. +.|+.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4457788899999 99999999999999999875 999999886
No 403
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.64 E-value=5.2e-05 Score=63.81 Aligned_cols=88 Identities=11% Similarity=0.089 Sum_probs=62.4
Q ss_pred CCCc-EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-------------------------c----c
Q 021368 177 ESKD-VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------------------------H----H 226 (313)
Q Consensus 177 ~~k~-~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~-------------------------~----~ 226 (313)
.++. +|++||++||+.|....+.+.++...|+.. ++.+..++++... . .
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~-gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL-GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVAR 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC-CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHH
Confidence 3554 566789999999999999999999999754 5888888876421 0 2
Q ss_pred cCCCC-------cCceEEEEe-CCCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 227 RAKSD-------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 227 ~~~v~-------~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
.|++. .+|+++++. +|.... .+.| .++.++|.+.|....
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~~---~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIRT---MLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEEE---EEecCCcccchhHHHHHHHHHHH
Confidence 35665 889999985 444431 2223 257888988887653
No 404
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.62 E-value=4e-05 Score=59.77 Aligned_cols=45 Identities=20% Similarity=0.293 Sum_probs=30.7
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~ 222 (313)
.+|+++|.|| ++||++|...++.+.++..+++.. ++.+..+..+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~-~~~~v~vs~d~ 74 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV-NAVVLGISVDP 74 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGC-SSEEEEEESSC
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccccccc-CceEeeecccc
Confidence 4688999998 999999999999999888888764 46666676654
No 405
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.62 E-value=8.4e-06 Score=59.99 Aligned_cols=80 Identities=8% Similarity=0.116 Sum_probs=52.0
Q ss_pred cEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc--cccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCC
Q 021368 52 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED--VGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGEL 128 (313)
Q Consensus 52 ~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~--~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~ 128 (313)
.+++|+++| ++|+.+.|.|.+++..| .++.||.+... ....+++.+|+.++ |++ +.+ |. ....+.|..
T Consensus 21 ~vv~f~a~~C~~C~~~~~~l~~~~~~~----~~v~v~~~~~~~~~~~~l~~~~~v~~~--Pt~-~~~-g~-~v~~~~~~~ 91 (116)
T 2e7p_A 21 PVVVFSKTYCGYCNRVKQLLTQVGASY----KVVELDELSDGSQLQSALAHWTGRGTV--PNV-FIG-GK-QIGGCDTVV 91 (116)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHHTCCC----EEEEGGGSTTHHHHHHHHHHHHSCCSS--CEE-EET-TE-EEECHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCCe----EEEEccCCCChHHHHHHHHHHhCCCCc--CEE-EEC-CE-EECChHHHH
Confidence 455699999 99999999999987553 45555554410 01368899999988 999 543 32 112222222
Q ss_pred ---CHHHHHHHHHHH
Q 021368 129 ---TLDKIKTFGEDF 140 (313)
Q Consensus 129 ---~~~~i~~fi~~~ 140 (313)
+.+.|.+++.+.
T Consensus 92 ~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 92 EKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHTTCHHHHHHHT
T ss_pred HHHhCChHHHHHHHc
Confidence 556777777764
No 406
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.62 E-value=0.00019 Score=57.42 Aligned_cols=42 Identities=7% Similarity=-0.016 Sum_probs=36.8
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMD 89 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~ 89 (313)
.++..+|.||+.| +.|....|.|.+++.++.++ +.|+.|+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 3457788899999 99999999999999999874 999999886
No 407
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.62 E-value=0.00013 Score=58.49 Aligned_cols=88 Identities=9% Similarity=-0.002 Sum_probs=61.6
Q ss_pred CCCcEEEEEeC-CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc---------------------------ccC
Q 021368 177 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---------------------------HRA 228 (313)
Q Consensus 177 ~~k~~lv~fy~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~---------------------------~~~ 228 (313)
.+++++|+||+ +||+.|...++.+.++..++++. ++.+..|..+.... ..|
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~y 107 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL-GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNF 107 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHh
Confidence 36899999995 99999999999999999988753 57777777654211 123
Q ss_pred CCC------cCceEEEEe-CCCCCcCceeeccC----cCHHHHHHHHHhcC
Q 021368 229 KSD------GFPTILFFP-AGNKSFDPINVDVD----RTVVALYKFLKKNA 268 (313)
Q Consensus 229 ~v~------~~P~i~~~~-~g~~~~~~~~y~g~----~~~~~l~~fi~~~~ 268 (313)
++. ..|+.+++. +|..+. .+.|. .+.+.|.+.|....
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~---~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQA---IEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHH
Confidence 443 269999995 444432 34342 36788888887764
No 408
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.61 E-value=6.8e-05 Score=52.29 Aligned_cols=54 Identities=19% Similarity=0.391 Sum_probs=38.9
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC--Cccc--ccC-CCCcCceEEEEeCCCC
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT--TNEH--HRA-KSDGFPTILFFPAGNK 244 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~--~~~~--~~~-~v~~~P~i~~~~~g~~ 244 (313)
.++.|+++||++|+.+.+.+.+. .+.+..+|++ .... ..+ ++.++|++++ +|..
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~--------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~--~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK--------GVKYTDIDASTSLRQEMVQRANGRNTFPQIFI--GDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH--------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEEE--TTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEEE--CCEE
Confidence 47789999999999999988876 2456677777 1111 356 8899999854 5543
No 409
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.60 E-value=4.4e-05 Score=52.57 Aligned_cols=77 Identities=9% Similarity=0.198 Sum_probs=57.3
Q ss_pred EEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCccc-ccchhhhhC--CCCCCCcEEEEEcCCCCceeccCCCC
Q 021368 53 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDV-GKPVSEYFG--ITGEAPKVLAYTGNDDAKKHILDGEL 128 (313)
Q Consensus 53 ~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~-~~~l~~~~~--v~~~~~P~i~~~~~~~~~~~~~~g~~ 128 (313)
+++|+++| +.|+.+.+.|++++.++.+ +.|..+|.+.... ...+.+.+| +..+ |++ +++ |. .. .|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~v--P~i-~~~-g~--~i--~~-- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETV--PQI-FVD-QQ--HI--GG-- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCS--CEE-EET-TE--EE--ES--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCcee--CeE-EEC-CE--EE--EC--
Confidence 56688899 9999999999999998877 8999999875210 136888899 8888 998 443 32 11 22
Q ss_pred CHHHHHHHHHHHh
Q 021368 129 TLDKIKTFGEDFL 141 (313)
Q Consensus 129 ~~~~i~~fi~~~~ 141 (313)
.+.|.+++.+.+
T Consensus 72 -~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 -YTDFAAWVKENL 83 (85)
T ss_dssp -SHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhc
Confidence 368888887754
No 410
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.59 E-value=8.2e-05 Score=60.87 Aligned_cols=43 Identities=23% Similarity=0.191 Sum_probs=36.9
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~ 221 (313)
.+|++||+||++||++| ..++.+.++..+|++. ++.+..|.++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~-g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF-GLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC-CEEEEEEECc
Confidence 47899999999999999 6788999999999864 5888888765
No 411
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.53 E-value=1.2e-05 Score=62.07 Aligned_cols=87 Identities=10% Similarity=0.148 Sum_probs=50.5
Q ss_pred cChHHHhhcCCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc---cc------ccCCCCcCceEEE
Q 021368 168 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---EH------HRAKSDGFPTILF 238 (313)
Q Consensus 168 ~~f~~~l~~~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~---~~------~~~~v~~~P~i~~ 238 (313)
+.+.+.+.. . . ++.|+++||++|+.+.+.+.+++ +.+..+|++.. .. ..+++.++|++++
T Consensus 40 ~~~~~~i~~-~-~-Vvvf~~~~Cp~C~~~k~~L~~~~--------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ifi 108 (146)
T 2ht9_A 40 NQIQETISD-N-C-VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 108 (146)
T ss_dssp HHHHHHHHH-C-S-EEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEEE
T ss_pred HHHHHHhcC-C-C-EEEEECCCChhHHHHHHHHHHcC--------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEEE
Confidence 344454432 2 3 44499999999999999998873 23444566544 11 3568899999853
Q ss_pred EeCCCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 239 FPAGNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 239 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
+|..+.......+......|.++|...
T Consensus 109 --~G~~igG~d~l~~l~~~g~L~~~L~~~ 135 (146)
T 2ht9_A 109 --NGTFIGGATDTHRLHKEGKLLPLVHQC 135 (146)
T ss_dssp --TTEEEESHHHHHHHHHTTCHHHHHHHT
T ss_pred --CCEEEeCchHHHHHHHcChHHHHHHHc
Confidence 655432000011112234577777664
No 412
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.53 E-value=0.00021 Score=57.80 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=68.9
Q ss_pred CCCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhh
Q 021368 48 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 99 (313)
Q Consensus 48 ~~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~ 99 (313)
.++..+|.|| +.| ++|....+.|.+++.+|.+ .+.|+.|+++... ....+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 3456778899 999 9999999999999999975 4899999887421 1246788
Q ss_pred hhCCC------CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHHh
Q 021368 100 YFGIT------GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 141 (313)
Q Consensus 100 ~~~v~------~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 141 (313)
.||+. .+ |++++++.++...+.+.| .++.+++.+.+....
T Consensus 113 ~~gv~~~~~~~~~--P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 113 DYGVLKTDEGIAY--RGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTTCEETTTTEEC--EEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCcee--eEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 99998 56 888888766544444333 356788998888764
No 413
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.52 E-value=0.00028 Score=56.85 Aligned_cols=42 Identities=29% Similarity=0.503 Sum_probs=35.2
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 220 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~ 220 (313)
+.+.+++.|+++||++|..+.+.+.++...+.. .+.+..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEecc
Confidence 357889999999999999999999999988865 566666654
No 414
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.51 E-value=0.00015 Score=56.80 Aligned_cols=43 Identities=21% Similarity=0.339 Sum_probs=36.3
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~ 222 (313)
.+++++|+|| +.||++|...++.+.++..++ . ++.+..|..+.
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~--~v~vv~Is~d~ 85 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S--NTIVLCISADL 85 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T--TEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CCEEEEEeCCC
Confidence 4678999999 899999999999999999988 3 57777777654
No 415
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.50 E-value=0.00043 Score=57.89 Aligned_cols=88 Identities=7% Similarity=0.066 Sum_probs=62.4
Q ss_pred CCCcEEEEEeC-CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------------------------------
Q 021368 177 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 225 (313)
Q Consensus 177 ~~k~~lv~fy~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------------------------------ 225 (313)
.+++++|+||+ .||+.|...++.+.++..+|++. ++.+..|.++....
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~-gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~ 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI-NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH
Confidence 46899999999 99999999999999999999864 57777777764221
Q ss_pred ccCCCC------cCceEEEEeCCCCCcCceeecc----CcCHHHHHHHHHhc
Q 021368 226 HRAKSD------GFPTILFFPAGNKSFDPINVDV----DRTVVALYKFLKKN 267 (313)
Q Consensus 226 ~~~~v~------~~P~i~~~~~g~~~~~~~~y~g----~~~~~~l~~fi~~~ 267 (313)
..|++. .+|+++++.....+ .. .+.+ ..+.+++++.|...
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I-~~-~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVL-RQ-ITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBE-EE-EEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeE-EE-EEecCCCCCCCHHHHHHHHHHh
Confidence 123554 57999999544443 11 2222 35678888888765
No 416
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.50 E-value=0.00014 Score=49.58 Aligned_cols=66 Identities=12% Similarity=0.177 Sum_probs=45.0
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------ccCCCCcCceEEEEeCCCCCcCceeeccCc
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSDGFPTILFFPAGNKSFDPINVDVDR 255 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~ 255 (313)
+++|+++||++|+.+...+.+. ++.+..+|++.+.. ..+++.++|++++ +|..+ .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~--~g~~i------~--- 63 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK--------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIFI--DAQHI------G--- 63 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE--TTEEE------E---
T ss_pred EEEEECCCChhHHHHHHHHHHC--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE--CCEEE------e---
Confidence 6779999999999999888775 24455667765432 2467889999853 55432 2
Q ss_pred CHHHHHHHHHh
Q 021368 256 TVVALYKFLKK 266 (313)
Q Consensus 256 ~~~~l~~fi~~ 266 (313)
....|.+++.+
T Consensus 64 g~~~i~~~~~~ 74 (82)
T 1fov_A 64 GYDDLYALDAR 74 (82)
T ss_dssp SHHHHHHHHHT
T ss_pred CHHHHHHHHHC
Confidence 23567777654
No 417
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.47 E-value=0.00035 Score=54.88 Aligned_cols=93 Identities=13% Similarity=0.061 Sum_probs=64.1
Q ss_pred CCCccEEEEEeeC-C-chhhhhHHHHHHHHhccC---eEEEEEEeCCCcc----cccchh--------------------
Q 021368 48 SPIKNQLLLFAVS-N-DSEKLLPVFEEAAKSFKG---KLIFVYVQMDNED----VGKPVS-------------------- 98 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~-~c~~~~~~~~~~a~~~~~---~v~f~~vd~~~~~----~~~~l~-------------------- 98 (313)
.++..+|.||+.| + .|....+.+.++..++.+ .+.|+.|+++... ....++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 3456788899999 7 999999999999998875 3889999886310 011122
Q ss_pred -hhh----------------CCCCCCCcEEEEEcCCCCceeccCCCC--CHHHHHHHHHHHhc
Q 021368 99 -EYF----------------GITGEAPKVLAYTGNDDAKKHILDGEL--TLDKIKTFGEDFLE 142 (313)
Q Consensus 99 -~~~----------------~v~~~~~P~i~~~~~~~~~~~~~~g~~--~~~~i~~fi~~~~~ 142 (313)
+.+ ++.. .|++++++.++.....+.|.. +.+.|.+.|.+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIH--QSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCS--CCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeee--eeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 222 2333 377777776654455556654 58899999998875
No 418
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.46 E-value=0.00061 Score=53.69 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=35.8
Q ss_pred CCCcEEEEEeCCCCc-cchhhhHHHHHHHHHhcCC-CcEEEEEEeCC
Q 021368 177 ESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGV-DSIVIAKMDGT 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~-~C~~~~~~~~~la~~~~~~-~~v~~~~vd~~ 221 (313)
.+|+++|+||.+||+ .|...++.+.++.+.++.. ..+.+..|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 579999999999996 7999999998888877543 25777766654
No 419
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.46 E-value=0.00015 Score=51.76 Aligned_cols=57 Identities=9% Similarity=0.103 Sum_probs=41.6
Q ss_pred CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc--cc----C-CCCcCceEEEEeCCCC
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HR----A-KSDGFPTILFFPAGNK 244 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~--~~----~-~v~~~P~i~~~~~g~~ 244 (313)
...-++.|+++||++|+.+...+.+. ++.+..+|++.+.. .. . +..++|++++ +|..
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~--------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi--~g~~ 77 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK--------GVEFQEYCIDGDNEAREAMAARANGKRSLPQIFI--DDQH 77 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH--------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEE--TTEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC--------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEE--CCEE
Confidence 45567789999999999999999876 34566678777643 22 2 7889998844 5543
No 420
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.45 E-value=0.00049 Score=56.73 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=69.7
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhhh
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSEY 100 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~~ 100 (313)
++..+|.|| +.| +.|....+.|.+++.+|.+ .+.|+.|.++... ....+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 356777899 899 9999999999999999964 4888888876410 13468889
Q ss_pred hCCC------CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHHhc
Q 021368 101 FGIT------GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFLE 142 (313)
Q Consensus 101 ~~v~------~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~~ 142 (313)
||+. .. |++++++.++...+.+.| .++.+++.+.+..+..
T Consensus 136 ygv~~~~~g~~~--P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 136 YGVLLEGPGLAL--RGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQF 185 (220)
T ss_dssp TTCEETTTTEEC--EEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred hCCeecCCCccc--ceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 9998 66 999899766544443333 3677999999988765
No 421
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.42 E-value=0.00027 Score=57.40 Aligned_cols=91 Identities=14% Similarity=0.104 Sum_probs=68.7
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhhh
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSEY 100 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~~ 100 (313)
++..+|.|| +.| +.|....+.|.+++.+|.+ .+.|+.|+++... ....+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 456777899 899 9999999999999999975 4889999886410 03467889
Q ss_pred hCCC------CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHHh
Q 021368 101 FGIT------GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 141 (313)
Q Consensus 101 ~~v~------~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 141 (313)
||+. .. |++++++.++...+.+.| .++.++|.+.+..+.
T Consensus 116 ygv~~~~~g~~~--P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 YGVLKEEDGVAY--RGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HTCEETTTTEEC--EEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCcee--eEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 9998 67 988888766544444333 356789999888775
No 422
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.40 E-value=0.0002 Score=51.49 Aligned_cols=71 Identities=13% Similarity=0.119 Sum_probs=48.4
Q ss_pred CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc--cc-----c----cCCCCcCceEEEEeCCCCCc
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN--EH-----H----RAKSDGFPTILFFPAGNKSF 246 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~--~~-----~----~~~v~~~P~i~~~~~g~~~~ 246 (313)
++..+++|+++||++|+.+.+.+.+.+ +.+-.+|++.. +. . ..+..++|++++ +|.
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~--------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~--- 86 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLG--------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE--- 86 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHT--------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT---
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC--------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC---
Confidence 445677899999999999999988763 33444555542 11 1 247889999887 331
Q ss_pred CceeeccCcCHHHHHHHH
Q 021368 247 DPINVDVDRTVVALYKFL 264 (313)
Q Consensus 247 ~~~~y~g~~~~~~l~~fi 264 (313)
.+.|..+.+.|.++|
T Consensus 87 ---~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 ---KAIVGFKEKEIRESL 101 (103)
T ss_dssp ---EEEESCCHHHHHHHT
T ss_pred ---EEEEcCCHHHHHHHh
Confidence 344567888887765
No 423
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.39 E-value=0.0033 Score=49.85 Aligned_cols=98 Identities=14% Similarity=0.108 Sum_probs=69.9
Q ss_pred cChHHHhh-------cCCCcEEEEEeCCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCCccc------------
Q 021368 168 NNFDEIVL-------DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNEH------------ 225 (313)
Q Consensus 168 ~~f~~~l~-------~~~k~~lv~fy~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~~~~------------ 225 (313)
.+|.+.+. ...|..+|+++++||..|..+.... ..+.+.++. ++.+...|++..+.
T Consensus 38 gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~--nfV~w~~dv~~~e~~~~~~~~~~~~~ 115 (178)
T 2ec4_A 38 GSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ--NFITWAWDLTKDSNRARFLTMCNRHF 115 (178)
T ss_dssp SCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH--TEEEEEEECCSHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc--CEEEEEEeCCCchhhhhhhhhhhhhh
Confidence 46666553 3468999999999999998886443 446666665 68888899887651
Q ss_pred --------ccCCCCcCceEEEEeC-CCCCcCceeeccCcCHHHHHHHHHhc
Q 021368 226 --------HRAKSDGFPTILFFPA-GNKSFDPINVDVDRTVVALYKFLKKN 267 (313)
Q Consensus 226 --------~~~~v~~~P~i~~~~~-g~~~~~~~~y~g~~~~~~l~~fi~~~ 267 (313)
..+++.++|+++++.. +....-..+..|..+.+.|+..|..-
T Consensus 116 g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 116 GSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp CHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 2278999999999943 22221123688999998888877654
No 424
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.38 E-value=0.00012 Score=51.34 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=46.7
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc---------cc--ccCCCCcCceEEEEeCCCCCcCce
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---------EH--HRAKSDGFPTILFFPAGNKSFDPI 249 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~---------~~--~~~~v~~~P~i~~~~~g~~~~~~~ 249 (313)
.++.|+++||++|+.+...+.++. +.+-.+|++.. .. ..+++.++|++++ +|.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g--------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~------ 76 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG--------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK------ 76 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE------
T ss_pred eEEEEECCCChHHHHHHHHHHHcC--------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE------
Confidence 367799999999999998888763 23334555521 11 3457889999987 442
Q ss_pred eeccCcCHHHHHHHHH
Q 021368 250 NVDVDRTVVALYKFLK 265 (313)
Q Consensus 250 ~y~g~~~~~~l~~fi~ 265 (313)
.. |..+.+.|.++|+
T Consensus 77 ~i-~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 HV-LGYNEEKLKELIR 91 (92)
T ss_dssp EE-ESCCHHHHHHHHH
T ss_pred EE-eCCCHHHHHHHhc
Confidence 23 3468899999885
No 425
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.35 E-value=5.8e-05 Score=59.32 Aligned_cols=91 Identities=9% Similarity=0.018 Sum_probs=59.3
Q ss_pred cCCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-----------------------ccCCCC
Q 021368 176 DESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----------------------HRAKSD 231 (313)
Q Consensus 176 ~~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-----------------------~~~~v~ 231 (313)
..+|+++|+|| ++||++|...++.+.++..+|+.. ++.+..+..+.... ..|++.
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~ 109 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA-NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVY 109 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS-SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc-CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCc
Confidence 46788888888 999999999888888888888764 46676676654221 123331
Q ss_pred ----------cCceEEEEeCCCCCcCceee----ccCcCHHHHHHHHHhcC
Q 021368 232 ----------GFPTILFFPAGNKSFDPINV----DVDRTVVALYKFLKKNA 268 (313)
Q Consensus 232 ----------~~P~i~~~~~g~~~~~~~~y----~g~~~~~~l~~fi~~~~ 268 (313)
..|+.++......+ ....+ .+..+.+++++-+++.+
T Consensus 110 ~~~~~~~~~~~~p~tflID~~G~I-~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 110 HEDLKGLKMVAKRAVFIVKPDGTV-AYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp EEEETTEEEEECCEEEEECTTSBE-EEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred ccccccCcCCeeeEEEEECCCCEE-EEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 35777777543333 11111 23457888888887654
No 426
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.34 E-value=0.00044 Score=54.60 Aligned_cols=83 Identities=8% Similarity=0.131 Sum_probs=62.2
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCc--------------------------------------
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE-------------------------------------- 91 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~-------------------------------------- 91 (313)
..++.|+..| ++|..+.|.+.++..++.+ +.|..++..-.
T Consensus 24 v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~~~~ 102 (175)
T 3gyk_A 24 VTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKANETG 102 (175)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCSHHH
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCCHHH
Confidence 4566788888 9999999999999999877 77766663210
Q ss_pred ----------------------------ccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhc
Q 021368 92 ----------------------------DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 92 ----------------------------~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~ 142 (313)
..+..+++.+||.++ |++++ + | . .+.|..+.+.|.+.|.+.+.
T Consensus 103 l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gt--Pt~~i-~-g--~--~~~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 103 VLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGT--PSFVV-E-D--A--LVPGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp HHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSS--SEEEE-T-T--E--EECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccC--CEEEE-C-C--E--EeeCCCCHHHHHHHHHHHHh
Confidence 003356788999999 99966 2 2 2 45788999999999988753
No 427
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.33 E-value=0.00025 Score=57.22 Aligned_cols=43 Identities=30% Similarity=0.463 Sum_probs=38.4
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~ 221 (313)
..+++++.||++||++|+.+.+.+.++...+.+ .+.+..+++.
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 467899999999999999999999999998876 6888888886
No 428
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.33 E-value=0.0012 Score=51.57 Aligned_cols=93 Identities=10% Similarity=0.021 Sum_probs=65.1
Q ss_pred CCCccEEEEEeeC--CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc--------------------cccchhhhhCCCC
Q 021368 48 SPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED--------------------VGKPVSEYFGITG 105 (313)
Q Consensus 48 ~~~~~~v~f~~~~--~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~--------------------~~~~l~~~~~v~~ 105 (313)
.++..+|.||+.| ++|....|.+.+++.++ ..+.|+.|+.+... ....+.+.||+..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 3457788899998 89999999999999999 55888888876411 1345667788865
Q ss_pred C----CCcEEEEEcCCCCceeccCC-----CCCHHHHHHHHHHHh
Q 021368 106 E----APKVLAYTGNDDAKKHILDG-----ELTLDKIKTFGEDFL 141 (313)
Q Consensus 106 ~----~~P~i~~~~~~~~~~~~~~g-----~~~~~~i~~fi~~~~ 141 (313)
. ..|+.++++.++...+.+.| ..+.+.+.+.+.+.+
T Consensus 122 ~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 122 KELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 2 13777777765544444432 335678888887764
No 429
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.32 E-value=0.00021 Score=56.33 Aligned_cols=45 Identities=20% Similarity=0.234 Sum_probs=35.7
Q ss_pred CCCcEEEEEe-CCCCccchh-hhHHHHHHHHHhcCCCcE-EEEEEeCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQA-FEPTYNKLAKHLRGVDSI-VIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~-~~~~~~~la~~~~~~~~v-~~~~vd~~~ 222 (313)
.+++++|+|| ++||+.|.. .++.+.++..++++. ++ .+..|..+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK-GVDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT-TCCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 4567888776 999999999 899999999988753 47 777777654
No 430
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.31 E-value=0.00021 Score=51.51 Aligned_cols=63 Identities=14% Similarity=0.265 Sum_probs=42.2
Q ss_pred ChHHHhhcCCCcEEEEEeC-----CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------ccCCCCcCceEE
Q 021368 169 NFDEIVLDESKDVLLEIYA-----PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSDGFPTIL 237 (313)
Q Consensus 169 ~f~~~l~~~~k~~lv~fy~-----~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------~~~~v~~~P~i~ 237 (313)
.+++.+. ...++| |++ +||++|+.+.+.+.++ ++.+..+|++.+.. ..++..++|+++
T Consensus 9 ~~~~~i~--~~~vvv-f~~g~~~~~~C~~C~~~~~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~ 77 (105)
T 2yan_A 9 RLKVLTN--KASVML-FMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKAYSNWPTYPQLY 77 (105)
T ss_dssp HHHHHHT--SSSEEE-EESBCSSSBCTTHHHHHHHHHHHH--------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHhc--cCCEEE-EEecCCCCCCCccHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeEE
Confidence 3445442 234444 776 9999999999998877 25567778876543 235788999984
Q ss_pred EEeCCCC
Q 021368 238 FFPAGNK 244 (313)
Q Consensus 238 ~~~~g~~ 244 (313)
+ +|..
T Consensus 78 i--~g~~ 82 (105)
T 2yan_A 78 V--KGEL 82 (105)
T ss_dssp E--TTEE
T ss_pred E--CCEE
Confidence 3 5554
No 431
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.31 E-value=0.00062 Score=54.65 Aligned_cols=92 Identities=12% Similarity=0.181 Sum_probs=67.9
Q ss_pred CCCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhh
Q 021368 48 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 99 (313)
Q Consensus 48 ~~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~ 99 (313)
.++..+|.|| +.| +.|....+.|.+++.+|.+ .+.|+.|+++... ....+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 3456777899 999 9999999999999999963 3888888876410 0246788
Q ss_pred hhCCC-----CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHHh
Q 021368 100 YFGIT-----GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 141 (313)
Q Consensus 100 ~~~v~-----~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 141 (313)
.||+. .. |++++++.++...+.+.| ..+.+++.+.+..+.
T Consensus 110 ~~gv~~~~g~~~--P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVAL--RAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEEC--CEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCcee--eEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99998 66 998888766544444433 246788888887765
No 432
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.30 E-value=3e-05 Score=57.44 Aligned_cols=57 Identities=14% Similarity=0.229 Sum_probs=39.7
Q ss_pred EEEEeCCCCccchhh-hHHHHHHHHHhcCCCcEEEEEEeCCCcc--------c-ccCCCCcCceEEEEeCCCCC
Q 021368 182 LLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGTTNE--------H-HRAKSDGFPTILFFPAGNKS 245 (313)
Q Consensus 182 lv~fy~~~C~~C~~~-~~~~~~la~~~~~~~~v~~~~vd~~~~~--------~-~~~~v~~~P~i~~~~~g~~~ 245 (313)
++.|+++||++|+.+ .+.+.+++. ..+.+..+|++.+. . ..+++.++|+++ .+|..+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~-----~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vf--i~g~~i 93 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV-----PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIY--INGKHI 93 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC-----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE--ETTEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC-----CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 667999999999998 777765531 13667777777653 1 356889999874 466543
No 433
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.30 E-value=0.00024 Score=58.17 Aligned_cols=88 Identities=8% Similarity=0.065 Sum_probs=62.6
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------------------------------
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 225 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------------------------------ 225 (313)
.+++++|+|| ++||++|...++.+.++..+|+.. ++.++.|.++....
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 125 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS 125 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH
Confidence 4679999999 999999999999999999999753 57777777654211
Q ss_pred ccCCCC------cCceEEEEeC-CCCCcCceeecc----CcCHHHHHHHHHhcC
Q 021368 226 HRAKSD------GFPTILFFPA-GNKSFDPINVDV----DRTVVALYKFLKKNA 268 (313)
Q Consensus 226 ~~~~v~------~~P~i~~~~~-g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 268 (313)
..|++. ..|+++++.. |..+. .+.| ..+.+++++.|....
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~---~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQ---ITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHhh
Confidence 123442 4899999954 44432 2323 246788888887753
No 434
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.29 E-value=0.00056 Score=56.07 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=67.6
Q ss_pred CCCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhh
Q 021368 48 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 99 (313)
Q Consensus 48 ~~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~ 99 (313)
.++..+|.|| +.| +.|....+.|.+++.+|.+ .+.|+.|+++... ....+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 3446777788 899 9999999999999999963 4888888876410 1346788
Q ss_pred hhCCC-----CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHHh
Q 021368 100 YFGIT-----GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 141 (313)
Q Consensus 100 ~~~v~-----~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 141 (313)
.||+. .. |++++++.++...+.+.| .++.+++.+.+..+.
T Consensus 131 ~ygv~~~~g~~~--p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSL--RAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEEC--EEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcc--cEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99998 66 888888766544444333 356889998888765
No 435
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.27 E-value=0.00027 Score=59.12 Aligned_cols=45 Identities=20% Similarity=0.361 Sum_probs=37.1
Q ss_pred CCCcEEEEEe-CCCCccch-hhhHHHHHHHHHhcCCCcE-EEEEEeCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQ-AFEPTYNKLAKHLRGVDSI-VIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~-~~~~~~~~la~~~~~~~~v-~~~~vd~~~ 222 (313)
.+++++|+|| ++||++|. ..++.+.++...+++. ++ .+..+..+.
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~-~~~~vv~is~d~ 79 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY-GVDDILVVSVND 79 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT-TCCEEEEEESSC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEcCC
Confidence 4678999999 99999999 8999999999998754 46 666676654
No 436
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.27 E-value=0.00099 Score=53.90 Aligned_cols=96 Identities=6% Similarity=-0.062 Sum_probs=66.5
Q ss_pred CCCccEEEEEeeC-Cc-hhhhhHHHHHHHHhcc----CeEEEEEEeCCCcc-------------------------cccc
Q 021368 48 SPIKNQLLLFAVS-ND-SEKLLPVFEEAAKSFK----GKLIFVYVQMDNED-------------------------VGKP 96 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~-c~~~~~~~~~~a~~~~----~~v~f~~vd~~~~~-------------------------~~~~ 96 (313)
.++.++|.|+..| ++ |....|.|.++..++. +.+.|+.|+++... ....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3557788899999 87 9999999999887775 35888888877310 0135
Q ss_pred hhhhhCCC-CC-------------CCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHhcC
Q 021368 97 VSEYFGIT-GE-------------APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 143 (313)
Q Consensus 97 l~~~~~v~-~~-------------~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~~~ 143 (313)
+++.|||. .. +.|++++++.++.....+.|..+.+.+.+.|.+.+..
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 77888887 23 1135566666655555677778888888888887753
No 437
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.27 E-value=0.00023 Score=56.10 Aligned_cols=43 Identities=5% Similarity=0.056 Sum_probs=35.1
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~ 222 (313)
.+++++|+|| +.||+.|....+.+.++..++ . ++.+..|.++.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~--~v~vv~Is~d~ 89 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E--GVDVTVVSMDL 89 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C--CceEEEEeCCC
Confidence 3678999999 899999999999999998877 3 57777666554
No 438
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.27 E-value=0.00024 Score=55.48 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=35.8
Q ss_pred CCCcEEEEEe-CCCCccch-hhhHHHHHHHHHhcCCCcEE-EEEEeCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQ-AFEPTYNKLAKHLRGVDSIV-IAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~-~~~~~~~~la~~~~~~~~v~-~~~vd~~~ 222 (313)
.+++++|+|| +.||+.|. ...+.+.++..++++. ++. +..|..+.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~-~v~~vv~Is~d~ 81 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK-GVTEILCISVND 81 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT-TCCCEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCC
Confidence 4678999999 89999999 8999999999988643 455 66565543
No 439
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.23 E-value=0.00042 Score=56.22 Aligned_cols=43 Identities=26% Similarity=0.367 Sum_probs=36.4
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~ 222 (313)
.+++++|+|| +.||+.|....+.+.++..++ . ++.++.|.++.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~--~v~vv~Is~D~ 120 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E--NTVVLCISSDL 120 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T--TEEEEEEESSC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C--CCEEEEEECCC
Confidence 4688999999 689999999999999999988 3 57888777665
No 440
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.21 E-value=0.00023 Score=55.59 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=35.5
Q ss_pred CCCcEEEEEeC-CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 021368 177 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~ 222 (313)
.+++++|+||+ .||++|...++.+.++..++ . ++.+..|..+.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~--~v~vv~is~d~ 84 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D--NTVVLTVSMDL 84 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CcEEEEEECCC
Confidence 46789999995 99999999999999998887 3 57777776654
No 441
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.21 E-value=0.00014 Score=57.61 Aligned_cols=43 Identities=14% Similarity=0.305 Sum_probs=34.4
Q ss_pred CcEEEEEeCCCCccchhh-hHHHHHHHHHhcCCCcEE-EEEEeCCC
Q 021368 179 KDVLLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIV-IAKMDGTT 222 (313)
Q Consensus 179 k~~lv~fy~~~C~~C~~~-~~~~~~la~~~~~~~~v~-~~~vd~~~ 222 (313)
+.++++||++||++|... ++.|.++..+++.. ++. +..|+.+.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~-g~~~vv~Is~d~ 89 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK-GVDSVICVAIND 89 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT-TCSEEEEEESSC
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 467788999999999998 99999999988753 455 66676654
No 442
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.16 E-value=0.0005 Score=56.50 Aligned_cols=83 Identities=13% Similarity=0.223 Sum_probs=59.4
Q ss_pred CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeC---------------------------------------
Q 021368 49 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQM--------------------------------------- 88 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~--------------------------------------- 88 (313)
....++.|+.+| ++|+++.+.+.+++.. + +.|..+..
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~-v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~ 162 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNAL--G-ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPAS 162 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhH
Confidence 345677799999 9999999999998764 3 55554432
Q ss_pred -CCc-ccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 89 -DNE-DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 89 -~~~-~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
... +.+..+++.+||+++ |++ ++.+|. .+.|..+.+.|.+++.+..
T Consensus 163 ~~~~v~~~~~l~~~~gV~gt--Pt~-v~~dG~----~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 163 CDVDIADHYALGVQLGVSGT--PAV-VLSNGT----LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CSCCHHHHHHHHHHHTCCSS--SEE-ECTTSC----EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcc--CEE-EEcCCe----EecCCCCHHHHHHHHHHhh
Confidence 110 114567889999999 999 554332 4578889999999988764
No 443
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.16 E-value=0.00042 Score=50.60 Aligned_cols=54 Identities=11% Similarity=0.357 Sum_probs=36.9
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCc----cc------ccCCCCcCceEEEEeCCCCC
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN----EH------HRAKSDGFPTILFFPAGNKS 245 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~----~~------~~~~v~~~P~i~~~~~g~~~ 245 (313)
++.|+++||++|+.+.+.|.++ ++.+..+|++.. .. ...+..++|++++ +|..+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi--~g~~i 84 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL--------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFV--CGKHI 84 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEE--TTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHc--------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEE
Confidence 6779999999999999988875 233445566542 11 1247889999844 66543
No 444
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.15 E-value=0.00044 Score=55.79 Aligned_cols=44 Identities=25% Similarity=0.479 Sum_probs=38.5
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~ 222 (313)
..++++|.|++.||++|..+.+.+.++...+.+ .+.|..+++..
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~~ 66 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVVW 66 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECCC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCCC
Confidence 357899999999999999999999999988876 68888888763
No 445
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.10 E-value=0.0011 Score=54.74 Aligned_cols=91 Identities=11% Similarity=0.135 Sum_probs=65.8
Q ss_pred CCCccEEEEEe-eC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcc-------------------------cccchhh
Q 021368 48 SPIKNQLLLFA-VS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED-------------------------VGKPVSE 99 (313)
Q Consensus 48 ~~~~~~v~f~~-~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~-------------------------~~~~l~~ 99 (313)
.++..+|.||+ .| +.|....|.|.++..+|.++ +.|+.|.++... ....+.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 34567778885 99 99999999999999999763 888888887421 1246778
Q ss_pred hhCCC------CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHH
Q 021368 100 YFGIT------GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDF 140 (313)
Q Consensus 100 ~~~v~------~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~ 140 (313)
.||+. .. |+.++++.++...+.+.| ....+++.+.+...
T Consensus 148 ~ygv~~~~~g~~~--P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 148 AYGVFDEEDGNAF--RGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HTTCBCTTTSSBC--EEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeecCCCCcc--ceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 89998 56 888888766544444333 24567777777654
No 446
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.09 E-value=0.00072 Score=54.10 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=33.8
Q ss_pred CCc-EEEEEeCCCCccchh-hhHHHHHHHHHhcCCCcEE-EEEEeCCC
Q 021368 178 SKD-VLLEIYAPWCGHCQA-FEPTYNKLAKHLRGVDSIV-IAKMDGTT 222 (313)
Q Consensus 178 ~k~-~lv~fy~~~C~~C~~-~~~~~~~la~~~~~~~~v~-~~~vd~~~ 222 (313)
+++ ++++||++||+.|.. -++.|.++..+|+.. ++. +..++.+.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 102 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR-GVDDIAVVAVND 102 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 554 556667999999999 699999999999764 455 66676654
No 447
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.02 E-value=0.0014 Score=53.67 Aligned_cols=82 Identities=13% Similarity=0.201 Sum_probs=58.3
Q ss_pred CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCC--------------------------------------
Q 021368 49 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMD-------------------------------------- 89 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~-------------------------------------- 89 (313)
....++.|+.+| ++|+++.+.+.++... + +.|.++...
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~ 162 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVK 162 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHH
Confidence 335567799999 9999999999997763 4 555544321
Q ss_pred --Cc-ccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHH
Q 021368 90 --NE-DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 140 (313)
Q Consensus 90 --~~-~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~ 140 (313)
.. ..+..+++.+||+++ |++++ .+|. .+.|..+.+.|.+++.+.
T Consensus 163 ~~~~v~~~~~l~~~~gV~gT--Pt~vi-~nG~----~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 163 TPNIVKKHYELGIQFGVRGT--PSIVT-STGE----LIGGYLKPADLLRALEET 209 (211)
T ss_dssp CSSHHHHHHHHHHHHTCCSS--CEEEC-TTSC----CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCcC--CEEEE-eCCE----EecCCCCHHHHHHHHHhc
Confidence 00 013567789999999 99966 4342 457888999999998763
No 448
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.01 E-value=0.00043 Score=48.36 Aligned_cols=54 Identities=15% Similarity=0.305 Sum_probs=38.9
Q ss_pred EEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------ccCCCCcCceEEEEeCCCC
Q 021368 181 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSDGFPTILFFPAGNK 244 (313)
Q Consensus 181 ~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------~~~~v~~~P~i~~~~~g~~ 244 (313)
.++.|+++||++|+.+...+.+. ++.+..+|++.+.. ..+++.++|+++ .+|..
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~--~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK--------GAEFNEIDASATPELRAEMQERSGRNTFPQIF--IGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT--------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEEE--ETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 47789999999999998888764 35566778776533 246788999753 35543
No 449
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.98 E-value=0.001 Score=51.05 Aligned_cols=78 Identities=19% Similarity=0.340 Sum_probs=55.5
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC----------------------------------
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------------------- 222 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~---------------------------------- 222 (313)
+.+.+++.|..++|++|+.+.+.+.++ + ++.+...+.-.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~ 85 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFP 85 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCC
Confidence 467899999999999999999987654 1 34444332111
Q ss_pred ---ccc-----------ccCCCCcCceEEEEeCCCCCcCceeeccCcCHHHHHHHHHhcC
Q 021368 223 ---NEH-----------HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 268 (313)
Q Consensus 223 ---~~~-----------~~~~v~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 268 (313)
..+ ..++|+++|++++ .+|. .+.|..+.+.|.++|.+..
T Consensus 86 ~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~------~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 86 VGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR------TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp TTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC------EEESCCCTTHHHHHHHHTS
T ss_pred CccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE------EeeCCCCHHHHHHHHHHHH
Confidence 000 3458999999998 4443 5778788899999998765
No 450
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.91 E-value=0.0011 Score=45.71 Aligned_cols=73 Identities=10% Similarity=0.061 Sum_probs=46.6
Q ss_pred cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCcc-----c-ccCCC-----CcCceEEEEeCCCCCcCc
Q 021368 180 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----H-HRAKS-----DGFPTILFFPAGNKSFDP 248 (313)
Q Consensus 180 ~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~-----~-~~~~v-----~~~P~i~~~~~g~~~~~~ 248 (313)
..++.|+++||++|+.+...+.+.. . .+.+..+|..... . ...+. .++|++++ +|..+
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~-----i-~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i--- 72 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN-----I-AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI--- 72 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT-----C-CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE---
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC-----C-CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE---
Confidence 3477899999999999988887653 1 3455555554431 1 33455 89999865 55432
Q ss_pred eeeccCcCHHHHHHHHHhcCC
Q 021368 249 INVDVDRTVVALYKFLKKNAS 269 (313)
Q Consensus 249 ~~y~g~~~~~~l~~fi~~~~~ 269 (313)
| ....+.+++.+.++
T Consensus 73 ----~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 73 ----G--GFTELKANADKILN 87 (89)
T ss_dssp ----E--SHHHHHHTHHHHTT
T ss_pred ----e--ChHHHHHHHHHHhc
Confidence 2 45667777776543
No 451
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=96.87 E-value=0.0035 Score=49.54 Aligned_cols=39 Identities=28% Similarity=0.554 Sum_probs=31.4
Q ss_pred CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEE
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIA 216 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~ 216 (313)
.++++|.|+.-.|++|..+.+.+..+.+.+.....+.+.
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKN 59 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEE
Confidence 578999999999999999999999998887663333333
No 452
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=96.86 E-value=0.0029 Score=49.05 Aligned_cols=90 Identities=9% Similarity=-0.017 Sum_probs=62.1
Q ss_pred CCccEEEEEe-eC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcc------------------cccchhhhhCCCC--
Q 021368 49 PIKNQLLLFA-VS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED------------------VGKPVSEYFGITG-- 105 (313)
Q Consensus 49 ~~~~~v~f~~-~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~------------------~~~~l~~~~~v~~-- 105 (313)
++..+|.||. .| +.|....+.+.++..+|++. +.++.|.++... ....+.+.||+..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4466777887 88 99999999999999999853 777777776321 1346677788865
Q ss_pred ----------CCCcEEEEEcCCCCceeccCCC---CCHHHHHHHHHHH
Q 021368 106 ----------EAPKVLAYTGNDDAKKHILDGE---LTLDKIKTFGEDF 140 (313)
Q Consensus 106 ----------~~~P~i~~~~~~~~~~~~~~g~---~~~~~i~~fi~~~ 140 (313)
. |+.++++.++...+.+.+. ...+++.+.+.+.
T Consensus 115 ~~~~~~~~~~~--p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 115 NMYGKQVLGIE--RSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EETTEEEEEEC--CEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccCcc--eEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 5 8888887766444444432 3345666666554
No 453
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.83 E-value=0.00066 Score=53.12 Aligned_cols=86 Identities=12% Similarity=0.074 Sum_probs=54.3
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-------------------------ccCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-------------------------HRAKS 230 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-------------------------~~~~v 230 (313)
.+++++|+|| +.||++|...++.+.++..+ .++.+..+..+.... ..|++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~----~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv 120 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK----EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGV 120 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT----TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTC
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc----CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCC
Confidence 4678999998 78999999999999888766 246666666554211 12344
Q ss_pred Cc------CceEEEEeC-CCCCcCce--eeccCcCHHHHHHHHHh
Q 021368 231 DG------FPTILFFPA-GNKSFDPI--NVDVDRTVVALYKFLKK 266 (313)
Q Consensus 231 ~~------~P~i~~~~~-g~~~~~~~--~y~g~~~~~~l~~fi~~ 266 (313)
.. .|+.+++.. |..+.... ...+..+.+.+++.|++
T Consensus 121 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 121 VMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp EETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred ccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 43 788888854 44321000 01124567788887764
No 454
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.81 E-value=0.0013 Score=55.36 Aligned_cols=45 Identities=9% Similarity=0.168 Sum_probs=38.7
Q ss_pred CCCcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCC
Q 021368 177 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 177 ~~k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~ 222 (313)
.+++++|+|| +.||+.|...++.+.++..+|++. ++.+..|.++.
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~-gv~vv~IS~D~ 135 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDS 135 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT-TEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEcCCC
Confidence 3678999999 999999999999999999999764 57888787765
No 455
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.77 E-value=0.0015 Score=47.27 Aligned_cols=64 Identities=11% Similarity=0.240 Sum_probs=42.9
Q ss_pred cChHHHhhcCCCcEEEEEeC-----CCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------ccCCCCcCceE
Q 021368 168 NNFDEIVLDESKDVLLEIYA-----PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSDGFPTI 236 (313)
Q Consensus 168 ~~f~~~l~~~~k~~lv~fy~-----~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------~~~~v~~~P~i 236 (313)
+.+++.+. ... ++.|+. +||++|..+...|... ++.+..+|++.+.. ...+..++|.+
T Consensus 6 ~~~~~~i~--~~~-vvvy~~g~~~~~~Cp~C~~ak~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 6 SGLKVLTN--KAS-VMLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp CCHHHHHT--TSS-EEEEESSTTTCCCSSTHHHHHHHHHHT--------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHhc--cCC-EEEEEecCCCCCCCchHHHHHHHHHHc--------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 45666663 233 445666 9999999999888765 35677888887643 23466789985
Q ss_pred EEEeCCCC
Q 021368 237 LFFPAGNK 244 (313)
Q Consensus 237 ~~~~~g~~ 244 (313)
|.+|..
T Consensus 75 --fi~g~~ 80 (109)
T 1wik_A 75 --YVRGDL 80 (109)
T ss_dssp --ECSSSE
T ss_pred --EECCEE
Confidence 446554
No 456
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.76 E-value=0.0017 Score=51.32 Aligned_cols=45 Identities=13% Similarity=0.297 Sum_probs=31.8
Q ss_pred CCCcEEE-EEeCCCCccch-hhhHHHHHHHHHhcCCCcEEEEE-EeCCC
Q 021368 177 ESKDVLL-EIYAPWCGHCQ-AFEPTYNKLAKHLRGVDSIVIAK-MDGTT 222 (313)
Q Consensus 177 ~~k~~lv-~fy~~~C~~C~-~~~~~~~~la~~~~~~~~v~~~~-vd~~~ 222 (313)
.+++++| +||++||+.|. ..++.|.++..+|+.. ++.+.. +..+.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~-gv~vv~~iS~D~ 89 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK-GVQVVACLSVND 89 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEEcCCC
Confidence 3565555 45599999999 5889999999999764 344442 55544
No 457
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=96.63 E-value=0.0021 Score=53.66 Aligned_cols=86 Identities=8% Similarity=0.037 Sum_probs=60.0
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCC---------------------------------------
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDN--------------------------------------- 90 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~--------------------------------------- 90 (313)
..++.|+.+| ++|+++.+.+.++... ++|.|.++...-
T Consensus 99 ~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~~~ 176 (241)
T 1v58_A 99 VIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPAN 176 (241)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCCSS
T ss_pred eEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcccc
Confidence 3466688888 9999999999987775 567777665410
Q ss_pred ----c----ccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHHHHHHHHHHHh
Q 021368 91 ----E----DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 141 (313)
Q Consensus 91 ----~----~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~~i~~fi~~~~ 141 (313)
. ..+..+++.+||+++ |++++.++++ ....+.|..+.+.|.+++.+.+
T Consensus 177 ~~~~~~~~v~~~~~l~~~~gv~gt--Pt~vi~~~~G-~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 177 VSTEQMKVLSDNEKLMDDLGANVT--PAIYYMSKEN-TLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCSS--CEEEEEETTT-EEEEEESSCCHHHHHHHTTC--
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCC--CEEEEECCCC-CEEEecCCCCHHHHHHHHHHHH
Confidence 0 013456788999999 9998876432 2234678889999999887654
No 458
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.54 E-value=0.00089 Score=53.75 Aligned_cols=43 Identities=19% Similarity=0.367 Sum_probs=34.3
Q ss_pred CCcEEEEEeCCCCccchhhhHHH---HHHHHHhcCCCcEEEEEEeCCC
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTT 222 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~vd~~~ 222 (313)
.++++|.|++.||++|+.+.+.+ ..+...+.+ .+.|..++...
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ--GSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT--TCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC--CCEEEEEechh
Confidence 36889999999999999999986 677777665 57777776654
No 459
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=96.53 E-value=0.011 Score=46.53 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=51.7
Q ss_pred CCccEEEEEeeC--CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc-------------------cccchhhhhCCCCCC
Q 021368 49 PIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED-------------------VGKPVSEYFGITGEA 107 (313)
Q Consensus 49 ~~~~~v~f~~~~--~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~-------------------~~~~l~~~~~v~~~~ 107 (313)
++..+|.||..| +.|....|.|.+++.+ .+ +.|+.|+.+... ....+.+.||+....
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~-v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-SG-ATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TT-CEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cC-CEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 456777899888 8999999999999998 54 888888876211 024678889987542
Q ss_pred -------CcEEEEEcCCCCceecc
Q 021368 108 -------PKVLAYTGNDDAKKHIL 124 (313)
Q Consensus 108 -------~P~i~~~~~~~~~~~~~ 124 (313)
.|+.++++.++...+.+
T Consensus 122 ~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp STTTTSBCSEEEEECTTSBEEEEE
T ss_pred cccCCcccceEEEECCCCeEEEEE
Confidence 16666666554444444
No 460
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.52 E-value=0.00049 Score=46.70 Aligned_cols=74 Identities=12% Similarity=0.064 Sum_probs=48.7
Q ss_pred EEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHH
Q 021368 53 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLD 131 (313)
Q Consensus 53 ~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~ 131 (313)
+++|+++| ++|+++.+.|.+. + +.|..+|++..........++|+... |++ +. ++. . . +..+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~-i~~~~vdi~~~~~~~~~~~~~g~~~v--P~~-~~-~g~--~--~-~g~~~~ 67 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----G-FDFEMINVDRVPEAAEALRAQGFRQL--PVV-IA-GDL--S--W-SGFRPD 67 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTCHHHHHHHHHTTCCSS--CEE-EE-TTE--E--E-ESCCHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----C-CCeEEEECCCCHHHHHHHHHhCCCcc--CEE-EE-CCE--E--E-ecCCHH
Confidence 56788899 9999999998864 3 66788999873212233345899988 998 44 332 1 1 235677
Q ss_pred HHHHHHHHHh
Q 021368 132 KIKTFGEDFL 141 (313)
Q Consensus 132 ~i~~fi~~~~ 141 (313)
.|.+++.+.+
T Consensus 68 ~l~~~l~~~~ 77 (81)
T 1h75_A 68 MINRLHPAPH 77 (81)
T ss_dssp HHGGGSCCC-
T ss_pred HHHHHHhccc
Confidence 7766665543
No 461
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.42 E-value=0.022 Score=46.57 Aligned_cols=42 Identities=10% Similarity=0.051 Sum_probs=35.1
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN 90 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~ 90 (313)
.++.++|.|++.| +.|. -.|.|.++..+|.+. +.|+.|.|+.
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~ 98 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQ 98 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccc
Confidence 4557778899999 9998 899999999999864 8899998763
No 462
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.39 E-value=0.0037 Score=41.34 Aligned_cols=70 Identities=14% Similarity=0.212 Sum_probs=47.8
Q ss_pred EEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEEEEEcCCCCceeccCCCCCHH
Q 021368 53 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLD 131 (313)
Q Consensus 53 ~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i~~~~~~~~~~~~~~g~~~~~ 131 (313)
+++|+++| ++|+++.+.++++ + +.|..+|.+.........+.+|+... |++.+ ++. . . +..+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~-i~~~~~di~~~~~~~~~~~~~~~~~v--P~l~~--~g~--~--~-~g~~~~ 67 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----G-LAYNTVDISLDDEARDYVMALGYVQA--PVVEV--DGE--H--W-SGFRPE 67 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTCHHHHHHHHHTTCBCC--CEEEE--TTE--E--E-ESCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----C-CCcEEEECCCCHHHHHHHHHcCCCcc--CEEEE--CCe--E--E-cCCCHH
Confidence 56688889 9999999998875 3 67788898873211222247899888 99863 332 1 2 345778
Q ss_pred HHHHHH
Q 021368 132 KIKTFG 137 (313)
Q Consensus 132 ~i~~fi 137 (313)
.|.+++
T Consensus 68 ~l~~~l 73 (75)
T 1r7h_A 68 RIKQLQ 73 (75)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887776
No 463
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=96.32 E-value=0.011 Score=48.47 Aligned_cols=94 Identities=12% Similarity=0.138 Sum_probs=64.5
Q ss_pred CCCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhh
Q 021368 48 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 99 (313)
Q Consensus 48 ~~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~ 99 (313)
.++..+|.|| +.| +.|....|.|.++..+|.+ .+.|+.|.++... ....+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 3456777899 999 9999999999999999963 3778887765411 0124556
Q ss_pred hhCCC---CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHHh
Q 021368 100 YFGIT---GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 141 (313)
Q Consensus 100 ~~~v~---~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 141 (313)
.||+. +...|+.++++.++...+.+.| ..+.+++.+.+....
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 77773 1123888888766544444333 357888988888765
No 464
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=96.27 E-value=0.0069 Score=48.37 Aligned_cols=40 Identities=13% Similarity=0.098 Sum_probs=33.8
Q ss_pred CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeC
Q 021368 49 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQM 88 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~ 88 (313)
....++.|+..| ++|..+.|.+.++..++.+++.|..+..
T Consensus 25 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 25 GKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 335577799999 9999999999999999998888886665
No 465
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=96.25 E-value=0.0043 Score=52.00 Aligned_cols=86 Identities=10% Similarity=0.008 Sum_probs=63.4
Q ss_pred EEEeeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc------------------------cccchhhhhCCC----
Q 021368 55 LLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED------------------------VGKPVSEYFGIT---- 104 (313)
Q Consensus 55 ~f~~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~------------------------~~~~l~~~~~v~---- 104 (313)
.|+++| +.|....+.|.+++.+|.+ .+.|+.|.++... ....+++.|||.
T Consensus 40 ~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~ 119 (249)
T 3a2v_A 40 SHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAES 119 (249)
T ss_dssp CCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTC
T ss_pred EEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccC
Confidence 356788 9999999999999999985 3888888886521 134688899997
Q ss_pred ---CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHHhc
Q 021368 105 ---GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFLE 142 (313)
Q Consensus 105 ---~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~~ 142 (313)
.. |++++++.++...+.+.| .++.++|.+.|..+..
T Consensus 120 g~~~~--p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 120 ATHTV--RGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKL 162 (249)
T ss_dssp SSSCC--EEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred CCccc--ceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHh
Confidence 55 988888766544333322 3678999999887653
No 466
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.21 E-value=0.0037 Score=45.62 Aligned_cols=53 Identities=9% Similarity=0.253 Sum_probs=36.6
Q ss_pred EEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc---------ccCCCCcCceEEEEeCCCC
Q 021368 182 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---------HRAKSDGFPTILFFPAGNK 244 (313)
Q Consensus 182 lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~---------~~~~v~~~P~i~~~~~g~~ 244 (313)
++.|+++||++|..+...+.++ ++.+..+|++.... ...+..++|++++ +|..
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~--------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~g~~ 80 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL--------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--NKVH 80 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHc--------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--CCEE
Confidence 5559999999999999888875 24455566664211 2346778999876 5554
No 467
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.20 E-value=0.029 Score=45.51 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=34.3
Q ss_pred CCCccEEEEEeeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCC
Q 021368 48 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMD 89 (313)
Q Consensus 48 ~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~ 89 (313)
.++.++|.|++.| +.| ...|.|.++..+|.+. +.|+.|.|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 4457788899999 999 6789999999999864 888888875
No 468
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.19 E-value=0.0035 Score=44.74 Aligned_cols=63 Identities=6% Similarity=0.005 Sum_probs=44.4
Q ss_pred cccccCCCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCccc----ccchhhhhCCCCCCCcEEE
Q 021368 43 PSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDV----GKPVSEYFGITGEAPKVLA 112 (313)
Q Consensus 43 ~~~~~~~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~----~~~l~~~~~v~~~~~P~i~ 112 (313)
++++.. ..+++|+++| ++|+++.+.|.+++..+.+ |..+|++.... ...+.+.+|+... |+++
T Consensus 6 ~~~i~~--~~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~v--P~i~ 73 (105)
T 1kte_A 6 NSKIQP--GKVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTV--PRVF 73 (105)
T ss_dssp HHHCCT--TCEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCS--CEEE
T ss_pred Hhhccc--CCEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCc--CeEE
Confidence 344443 3577789999 9999999999988777654 55566655210 1257788999988 9983
No 469
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=96.12 E-value=0.0066 Score=50.05 Aligned_cols=88 Identities=11% Similarity=0.043 Sum_probs=58.8
Q ss_pred cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc---------------------------------c
Q 021368 180 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---------------------------------H 226 (313)
Q Consensus 180 ~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~---------------------------------~ 226 (313)
.+|++|+++||+.|....+.+.++..+|+.. ++.+..+.++.... .
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR-NVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAI 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHH
Confidence 4566678999999999999999999999764 57777777664211 1
Q ss_pred cCCCC------------cCceEEEEeCCCCCcCceeec--cCcCHHHHHHHHHhcC
Q 021368 227 RAKSD------------GFPTILFFPAGNKSFDPINVD--VDRTVVALYKFLKKNA 268 (313)
Q Consensus 227 ~~~v~------------~~P~i~~~~~g~~~~~~~~y~--g~~~~~~l~~fi~~~~ 268 (313)
.|++. .+|+++++.....+.....+. ..++.++|++.|....
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 23442 368999995544431111111 1357888998887764
No 470
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=96.11 E-value=0.013 Score=45.11 Aligned_cols=76 Identities=9% Similarity=0.029 Sum_probs=49.3
Q ss_pred cEEEEE-eeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc------------------cccchhhhhCCCCCCCc--
Q 021368 52 NQLLLF-AVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED------------------VGKPVSEYFGITGEAPK-- 109 (313)
Q Consensus 52 ~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~------------------~~~~l~~~~~v~~~~~P-- 109 (313)
.++.|| +.| +.|....|.|.++..+|.+.-.|+.|.++... ....+++.||+... |
T Consensus 38 vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~--p~~ 115 (159)
T 2a4v_A 38 VVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKT--PLS 115 (159)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSS--SSS
T ss_pred EEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccc--ccC
Confidence 445566 788 99999999999999999852266666654311 13467888999877 5
Q ss_pred -----EEEEEcCCCCceeccCCCCCHH
Q 021368 110 -----VLAYTGNDDAKKHILDGELTLD 131 (313)
Q Consensus 110 -----~i~~~~~~~~~~~~~~g~~~~~ 131 (313)
++++ ..| ...+.+.|.....
T Consensus 116 g~~~~~~li-~~G-~i~~~~~g~~~~~ 140 (159)
T 2a4v_A 116 GSIRSHFIF-VDG-KLKFKRVKISPEV 140 (159)
T ss_dssp CBCCEEEEE-ETT-EEEEEEESCCHHH
T ss_pred CccceEEEE-cCC-EEEEEEccCCccc
Confidence 5544 444 3444455544433
No 471
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=96.10 E-value=0.014 Score=46.07 Aligned_cols=92 Identities=10% Similarity=-0.017 Sum_probs=59.6
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCcc------------------cccchhhhhCCCCC-
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED------------------VGKPVSEYFGITGE- 106 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~------------------~~~~l~~~~~v~~~- 106 (313)
++..+|.|| +.| +.|....+.|.++..+|.+. +.++.|.++... ....+++.||+...
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 345666677 888 89999999999999999863 777777766422 13456677777531
Q ss_pred ---------CCcEEEEEcCCCCceeccCC---CCCHHHHHHHHHHH
Q 021368 107 ---------APKVLAYTGNDDAKKHILDG---ELTLDKIKTFGEDF 140 (313)
Q Consensus 107 ---------~~P~i~~~~~~~~~~~~~~g---~~~~~~i~~fi~~~ 140 (313)
..|+.++++.++...+.+.+ ....+++.+.++..
T Consensus 131 ~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp CCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 12667777766544444433 23455666666554
No 472
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.09 E-value=0.0028 Score=50.60 Aligned_cols=40 Identities=30% Similarity=0.504 Sum_probs=34.0
Q ss_pred CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 221 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~ 221 (313)
+++++|.|++.||++|..+.+.+.++.+.+ + +.|..+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~---v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G---TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T---SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C---CeEEEEecc
Confidence 578999999999999999999999999988 3 556666654
No 473
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.09 E-value=0.0047 Score=51.28 Aligned_cols=89 Identities=6% Similarity=-0.042 Sum_probs=60.0
Q ss_pred CcEEEEEe-CCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc-------------------------------c
Q 021368 179 KDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-------------------------------H 226 (313)
Q Consensus 179 k~~lv~fy-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~-------------------------------~ 226 (313)
+.++|+|| ++||+.|....+.+.++..+|+.. ++.+..+.++.... .
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~-~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR-GVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 47888898 899999999999999999988753 57777777654210 1
Q ss_pred cCCCC------------cCceEEEEeCCCCCcCceeecc--CcCHHHHHHHHHhcC
Q 021368 227 RAKSD------------GFPTILFFPAGNKSFDPINVDV--DRTVVALYKFLKKNA 268 (313)
Q Consensus 227 ~~~v~------------~~P~i~~~~~g~~~~~~~~y~g--~~~~~~l~~fi~~~~ 268 (313)
.|++. .+|+++++.....+.....+.. .++.++|++.|....
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 23442 4689988855444311111211 357888998887653
No 474
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=95.99 E-value=0.015 Score=46.47 Aligned_cols=41 Identities=20% Similarity=0.249 Sum_probs=35.9
Q ss_pred CCccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCC
Q 021368 49 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMD 89 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~ 89 (313)
....++.|+..| ++|..+.|.+.++..++.+++.|..++..
T Consensus 25 ~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 25 GKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 345677899999 99999999999999999988999998875
No 475
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=95.94 E-value=0.018 Score=46.80 Aligned_cols=93 Identities=12% Similarity=0.149 Sum_probs=64.1
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhhh
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSEY 100 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~~ 100 (313)
++..+|.|| +.| +.|....|.|.++..+|.. .+.|+.|.++... ....+++.
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 456777788 999 9999999999999999964 4778888765421 01345567
Q ss_pred hCCC----CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHHh
Q 021368 101 FGIT----GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 141 (313)
Q Consensus 101 ~~v~----~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~~ 141 (313)
||+. +...|+.++++.++...+.+.| ..+.+++.+.+..+.
T Consensus 128 ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 128 YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 7774 1123888888766544444323 257788888888765
No 476
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.88 E-value=0.0026 Score=47.62 Aligned_cols=56 Identities=11% Similarity=0.231 Sum_probs=36.1
Q ss_pred EEEEeCCCCccchhh-hHHHHHHHHHhcCCCcEEEEEEeCCCcc--------c-ccCCCCcCceEEEEeCCCC
Q 021368 182 LLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGTTNE--------H-HRAKSDGFPTILFFPAGNK 244 (313)
Q Consensus 182 lv~fy~~~C~~C~~~-~~~~~~la~~~~~~~~v~~~~vd~~~~~--------~-~~~~v~~~P~i~~~~~g~~ 244 (313)
+++|+++||++|..+ .+.+..+.. ..+.+..+|++... . ..++..++|++++ +|..
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~-----~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vfi--~g~~ 104 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNV-----PKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVYI--NGKH 104 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCC-----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCc-----cCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEEE--CCEE
Confidence 678999999999988 777765531 01344445555432 1 3467889999743 5554
No 477
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=95.84 E-value=0.018 Score=45.70 Aligned_cols=94 Identities=9% Similarity=-0.071 Sum_probs=63.0
Q ss_pred CCccEEEEEe-eC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCccc----------------------ccchhhhhCC
Q 021368 49 PIKNQLLLFA-VS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDV----------------------GKPVSEYFGI 103 (313)
Q Consensus 49 ~~~~~v~f~~-~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~~----------------------~~~l~~~~~v 103 (313)
++..+|.||. .| +.|....|.|.++..+|.+ .+.|+.|.++.... ...+++.||+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 4466677885 78 9999999999999999874 47788877654210 1234556666
Q ss_pred C----CCCCcEEEEEcCCCCceeccCCC----CCHHHHHHHHHHHhc
Q 021368 104 T----GEAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLE 142 (313)
Q Consensus 104 ~----~~~~P~i~~~~~~~~~~~~~~g~----~~~~~i~~fi~~~~~ 142 (313)
. ++..|+.++++.++...+.+.|. .+.+++.+.+..+..
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 5 21238887887665444444332 368888888887653
No 478
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=95.73 E-value=0.022 Score=47.43 Aligned_cols=91 Identities=11% Similarity=0.138 Sum_probs=63.4
Q ss_pred CCCccEEEEEe-eC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhh
Q 021368 48 SPIKNQLLLFA-VS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 99 (313)
Q Consensus 48 ~~~~~~v~f~~-~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~ 99 (313)
.++..+|.||. .| +.|....+.|.+++.+|++ .+.++.|.++... ....+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 34466777888 88 9999999999999999975 3778888776421 0235667
Q ss_pred hhCCC------CCCCcEEEEEcCCCCceeccCC----CCCHHHHHHHHHHH
Q 021368 100 YFGIT------GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDF 140 (313)
Q Consensus 100 ~~~v~------~~~~P~i~~~~~~~~~~~~~~g----~~~~~~i~~fi~~~ 140 (313)
.||+. .. |+.++++.++...+.+.+ ..+.+++.+.+...
T Consensus 156 ~ygv~~~~~g~~~--p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTL--RGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEEC--EEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCcc--ceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 78886 34 888788766544333222 45678888887665
No 479
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=95.72 E-value=0.0072 Score=49.65 Aligned_cols=88 Identities=11% Similarity=0.159 Sum_probs=58.3
Q ss_pred cEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------------------------------ccCC
Q 021368 180 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------HRAK 229 (313)
Q Consensus 180 ~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------------------------------~~~~ 229 (313)
.++++|+++||+.|....+.+.++..+|+.. ++.+..+.++.... ..|+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~yg 112 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKL-NCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLK 112 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhC
Confidence 4455568999999999999999999999764 57777777764211 1124
Q ss_pred CC------------cCceEEEEeCCCCCcCceeec--cCcCHHHHHHHHHhcC
Q 021368 230 SD------------GFPTILFFPAGNKSFDPINVD--VDRTVVALYKFLKKNA 268 (313)
Q Consensus 230 v~------------~~P~i~~~~~g~~~~~~~~y~--g~~~~~~l~~fi~~~~ 268 (313)
+. ..|+++++.....+.....+. ..++.++|++.|....
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 31 368999885544431111221 2468888988887754
No 480
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=95.64 E-value=0.028 Score=43.55 Aligned_cols=89 Identities=12% Similarity=0.079 Sum_probs=54.7
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCccccc--------------------chhhhhCCCCC
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGK--------------------PVSEYFGITGE 106 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~--------------------~l~~~~~v~~~ 106 (313)
++..+|.|| +.| +.|....+.|.++..+ .+ +.++.|.++...... .+.+.||+...
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~-~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 123 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK-EE-GIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVME 123 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TT-SEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEET
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc-CC-CEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccc
Confidence 446677777 678 8999999999999888 55 777777765432122 34445555430
Q ss_pred ----CCcEEEEEcCCCCceec-----cCCCCCHHHHHHHHHH
Q 021368 107 ----APKVLAYTGNDDAKKHI-----LDGELTLDKIKTFGED 139 (313)
Q Consensus 107 ----~~P~i~~~~~~~~~~~~-----~~g~~~~~~i~~fi~~ 139 (313)
..|+.++++.++...+. ..+..+.+.+.+.+.+
T Consensus 124 ~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 124 ELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp TTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred cCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 13777677655433333 2234566777766653
No 481
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=95.63 E-value=0.05 Score=42.41 Aligned_cols=94 Identities=7% Similarity=-0.066 Sum_probs=63.7
Q ss_pred CCccEEEEEeeC-C-chhhhhHHHHHHHHhcc---CeEEEEEEeCCCcc----------------------------ccc
Q 021368 49 PIKNQLLLFAVS-N-DSEKLLPVFEEAAKSFK---GKLIFVYVQMDNED----------------------------VGK 95 (313)
Q Consensus 49 ~~~~~v~f~~~~-~-~c~~~~~~~~~~a~~~~---~~v~f~~vd~~~~~----------------------------~~~ 95 (313)
++.++|.|+..| + .|....+.+.++..++. ..+.++.|.++..+ ...
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 557788899999 5 59999999999999995 34777777665200 012
Q ss_pred chhhhhCCCC-------CCCcEEEEEcCCCCceeccCC-CCCHHHHHHHHHHHhc
Q 021368 96 PVSEYFGITG-------EAPKVLAYTGNDDAKKHILDG-ELTLDKIKTFGEDFLE 142 (313)
Q Consensus 96 ~l~~~~~v~~-------~~~P~i~~~~~~~~~~~~~~g-~~~~~~i~~fi~~~~~ 142 (313)
.+++.||+.. .+.|++++++.++.....+.| ..+.++|.+.+.+.+.
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 4555555432 134777777766544444445 4789999999998765
No 482
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=95.62 E-value=0.013 Score=45.50 Aligned_cols=57 Identities=14% Similarity=0.181 Sum_probs=42.0
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
++..+|.|| +.| +.|....|.|.++..+| ..+.|+.|..+.......+++++++..+
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~ 101 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENA 101 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCce
Confidence 445667787 788 99999999999999999 5588888888753323455666666334
No 483
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=95.60 E-value=0.012 Score=45.50 Aligned_cols=92 Identities=12% Similarity=0.136 Sum_probs=52.3
Q ss_pred CCCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCccc------------------ccchhhhhCCCC-
Q 021368 48 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDV------------------GKPVSEYFGITG- 105 (313)
Q Consensus 48 ~~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~~------------------~~~l~~~~~v~~- 105 (313)
.++.+++.|| +.| +.|....|.+.++..++.+ .+.++.|..+.... ...+++.|||..
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 3446677787 889 9999999999999998886 36777777654321 234555666531
Q ss_pred --------CCCcEEEEEcCCCCceecc-----CCCCCHHHHHHHHHH
Q 021368 106 --------EAPKVLAYTGNDDAKKHIL-----DGELTLDKIKTFGED 139 (313)
Q Consensus 106 --------~~~P~i~~~~~~~~~~~~~-----~g~~~~~~i~~fi~~ 139 (313)
...|+.++++.++...+.+ .+..+.+++.+.+..
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 0125555666554333322 345677888887764
No 484
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.57 E-value=0.022 Score=44.60 Aligned_cols=45 Identities=9% Similarity=0.040 Sum_probs=35.0
Q ss_pred CCCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC
Q 021368 177 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 221 (313)
Q Consensus 177 ~~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~ 221 (313)
+.+..++.|+..+|++|..+.+.+..+...+.....+.+...+..
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 356789999999999999999999998888722225777766654
No 485
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=95.54 E-value=0.0061 Score=44.36 Aligned_cols=58 Identities=7% Similarity=0.084 Sum_probs=41.9
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc----cccchhhhhCCCCCCCcEEEE
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED----VGKPVSEYFGITGEAPKVLAY 113 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~----~~~~l~~~~~v~~~~~P~i~~ 113 (313)
..+++|+++| +.|+++.+.|.+++... +. |..+|++... ....+.+.+|+.+. |++++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~v--P~v~i 81 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTV--PRIFF 81 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSS--CEEEE
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCc--CEEEE
Confidence 4577888999 99999999998765442 22 7778887631 01367889999988 98743
No 486
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=95.54 E-value=0.031 Score=46.93 Aligned_cols=93 Identities=11% Similarity=0.101 Sum_probs=62.5
Q ss_pred CCCccEEEEE-eeC-CchhhhhHHHHHHHHhccC-eEEEEEEeCCCcc-------------------------cccchhh
Q 021368 48 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 99 (313)
Q Consensus 48 ~~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~-~v~f~~vd~~~~~-------------------------~~~~l~~ 99 (313)
.++..+|.|| +.| +.|....+.|.+++.+|++ .+.|+.|.++... ....+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 3445667787 788 9999999999999999975 3778888776421 0235667
Q ss_pred hhCCCC----CCCcEEEEEcCCCCceeccC----CCCCHHHHHHHHHHH
Q 021368 100 YFGITG----EAPKVLAYTGNDDAKKHILD----GELTLDKIKTFGEDF 140 (313)
Q Consensus 100 ~~~v~~----~~~P~i~~~~~~~~~~~~~~----g~~~~~~i~~fi~~~ 140 (313)
.||+.. ...|++++++.++...+.+. ..++.+++.+.+...
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 777752 11377778876654433332 246678888877654
No 487
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=95.43 E-value=0.019 Score=45.71 Aligned_cols=41 Identities=17% Similarity=0.361 Sum_probs=34.5
Q ss_pred CCcEEEEEeCCCCccchhhhHHHHHHHHHhcCCCcEEEEEEeC
Q 021368 178 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 220 (313)
Q Consensus 178 ~k~~lv~fy~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~ 220 (313)
.+.+++.|+..+|++|..+.+.+.++...+.. .+.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK--DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC--ceEEEEeCc
Confidence 46689999999999999999999999887764 577776665
No 488
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.43 E-value=0.04 Score=38.40 Aligned_cols=77 Identities=6% Similarity=0.043 Sum_probs=51.2
Q ss_pred cEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhh--CCCCCCCcEEEEEcCCCCceeccCCCC
Q 021368 52 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYF--GITGEAPKVLAYTGNDDAKKHILDGEL 128 (313)
Q Consensus 52 ~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~--~v~~~~~P~i~~~~~~~~~~~~~~g~~ 128 (313)
.+++|..+| +.|.+....|.+. + +.|..+|.+......+...+. |.+.. |+|++ ..+. . -+..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-----g-i~y~~idi~~d~~~~~~~~~~~~G~~tV--P~I~i-~Dg~--~---l~~~ 70 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-----R-IAYDEVDIEHNRAAAEFVGSVNGGNRTV--PTVKF-ADGS--T---LTNP 70 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-----T-CCCEEEETTTCHHHHHHHHHHSSSSSCS--CEEEE-TTSC--E---EESC
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-----C-CceEEEEcCCCHHHHHHHHHHcCCCCEe--CEEEE-eCCE--E---EeCC
Confidence 455666777 9999999998863 3 667788988743222333332 67777 99854 3332 1 1246
Q ss_pred CHHHHHHHHHHHhc
Q 021368 129 TLDKIKTFGEDFLE 142 (313)
Q Consensus 129 ~~~~i~~fi~~~~~ 142 (313)
+.++|.+++.+..+
T Consensus 71 ~~~el~~~L~el~g 84 (92)
T 2lqo_A 71 SADEVKAKLVKIAG 84 (92)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcC
Confidence 88999999998765
No 489
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=95.15 E-value=0.0054 Score=49.50 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=38.0
Q ss_pred CCccEEEEEeeC-CchhhhhHHH---HHHHHhccCeEEEEEEeCCC
Q 021368 49 PIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDN 90 (313)
Q Consensus 49 ~~~~~v~f~~~~-~~c~~~~~~~---~~~a~~~~~~v~f~~vd~~~ 90 (313)
....+|.||+.| ++|+.+.|.| .++++++.+++.|..++.+.
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~ 158 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNF 158 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCc
Confidence 446788899999 9999999999 99999999889999999875
No 490
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.05 E-value=0.031 Score=40.36 Aligned_cols=50 Identities=18% Similarity=0.109 Sum_probs=34.7
Q ss_pred EEEEEeCCCCccch------hhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------ccC--------CCCcCceEEE
Q 021368 181 VLLEIYAPWCGHCQ------AFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRA--------KSDGFPTILF 238 (313)
Q Consensus 181 ~lv~fy~~~C~~C~------~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------~~~--------~v~~~P~i~~ 238 (313)
.++.|+.++|+.|. .+...|... ++.+..+|++.+.. ..+ +...+|.+++
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~--------gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi 78 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN--------KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFN 78 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT--------TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEEE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc--------CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEEE
Confidence 46778999999998 566655542 46677888887643 232 5567898765
No 491
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=95.04 E-value=0.091 Score=41.72 Aligned_cols=38 Identities=11% Similarity=0.127 Sum_probs=31.9
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeC
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQM 88 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~ 88 (313)
..++.|+..+ ++|..+.+.+.++..++.+.+.|..+..
T Consensus 24 ~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 24 IEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp EEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred cEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 4566788888 9999999999999999987777777764
No 492
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=95.04 E-value=0.034 Score=44.79 Aligned_cols=57 Identities=11% Similarity=0.145 Sum_probs=42.6
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
++..+|.|| +.| +.|....+.|.++..+|.+ +.|+.|.++......++++++++..+
T Consensus 78 Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~~-v~vv~Is~D~~~~~~~~~~~~~~~~f 136 (200)
T 3zrd_A 78 GKRKVLNIFPSIDTGVCAASVRKFNQLAGELEN-TVVLCISSDLPFAQSRFCGAEGLSNV 136 (200)
T ss_dssp TSEEEEEECSCCCCSCCCHHHHHHHHHHHTSTT-EEEEEEESSCHHHHTTCTTTTTCTTE
T ss_pred CCcEEEEEECCCCCchhHHHHHHHHHHHHHhCC-CEEEEEECCCHHHHHHHHHHcCCCCc
Confidence 445667787 678 9999999999999999944 88888888764324456666666444
No 493
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.04 E-value=0.025 Score=42.19 Aligned_cols=53 Identities=11% Similarity=0.132 Sum_probs=39.1
Q ss_pred cEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCccccc----chhhhhCCCCCCCcEEE
Q 021368 52 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGK----PVSEYFGITGEAPKVLA 112 (313)
Q Consensus 52 ~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~----~l~~~~~v~~~~~P~i~ 112 (313)
.+++|+.+| ++|+++.+.|.++. +.|..+|++....++ .+.+.+|+..+ |+++
T Consensus 28 ~vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~v--P~l~ 85 (130)
T 2cq9_A 28 CVVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTV--PRIF 85 (130)
T ss_dssp SEEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCS--SEEE
T ss_pred cEEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCc--CEEE
Confidence 466688999 99999999999874 345667776531012 37788999988 9984
No 494
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=95.02 E-value=0.024 Score=44.19 Aligned_cols=57 Identities=18% Similarity=0.153 Sum_probs=43.3
Q ss_pred CCccEEEEE-eeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCC
Q 021368 49 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 106 (313)
Q Consensus 49 ~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~ 106 (313)
++..+|.|| +.| +.|....+.+.++..+| ..+.|+.|.++.......+++++++..+
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~ 105 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNV 105 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSS
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCe
Confidence 445666677 688 99999999999999999 5588999988764324556777777545
No 495
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=94.98 E-value=0.0064 Score=47.41 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=62.1
Q ss_pred ccCCCccEEEEE-eeC-CchhhhhHHHHHHHHhccCe-EEEEEEeCCCccc------------------ccchhhhhCCC
Q 021368 46 FESPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDV------------------GKPVSEYFGIT 104 (313)
Q Consensus 46 ~~~~~~~~v~f~-~~~-~~c~~~~~~~~~~a~~~~~~-v~f~~vd~~~~~~------------------~~~l~~~~~v~ 104 (313)
..+++..++.|| +.| +.|....+.|.++..+|++. +.++.|..+.... ...+++.|||.
T Consensus 30 ~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~ 109 (164)
T 4gqc_A 30 LKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVY 109 (164)
T ss_dssp HHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred hcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCc
Confidence 335556777787 889 99999999999999998863 7777777654221 23556666663
Q ss_pred C--------CCCcEEEEEcCCCCceecc-----CCCCCHHHHHHHHHHHhc
Q 021368 105 G--------EAPKVLAYTGNDDAKKHIL-----DGELTLDKIKTFGEDFLE 142 (313)
Q Consensus 105 ~--------~~~P~i~~~~~~~~~~~~~-----~g~~~~~~i~~fi~~~~~ 142 (313)
. ...|+.++++.++...+.+ .+..+.+++.+.+.+..+
T Consensus 110 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 110 HEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred ccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 1 1125566666655433332 234578888888877643
No 496
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=94.97 E-value=0.024 Score=43.79 Aligned_cols=61 Identities=16% Similarity=0.128 Sum_probs=45.1
Q ss_pred CCCccEEEEEe-eC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhhCCCCCCCcEE
Q 021368 48 SPIKNQLLLFA-VS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 111 (313)
Q Consensus 48 ~~~~~~v~f~~-~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~~v~~~~~P~i 111 (313)
.++..+|.||. .| +.|....|.|.++..+| ..+.|+.|.++.......+++++++..+ |.+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~--~~l 103 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNA--IML 103 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTS--EEE
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCc--EEe
Confidence 34466677874 88 89999999999999999 5588999988764324556777787445 643
No 497
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.95 E-value=0.025 Score=39.37 Aligned_cols=49 Identities=14% Similarity=0.043 Sum_probs=34.6
Q ss_pred EEEEeCCCCccc------hhhhHHHHHHHHHhcCCCcEEEEEEeCCCccc------ccCC--CCcCceEEE
Q 021368 182 LLEIYAPWCGHC------QAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAK--SDGFPTILF 238 (313)
Q Consensus 182 lv~fy~~~C~~C------~~~~~~~~~la~~~~~~~~v~~~~vd~~~~~~------~~~~--v~~~P~i~~ 238 (313)
++.|++++|+.| ..+...+... ++.+..+|++.+.. ...+ ...+|.+++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~--------~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK--------RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT--------TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC--------CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 667899999999 6776666543 46677788876633 2345 568898865
No 498
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=94.58 E-value=0.029 Score=38.46 Aligned_cols=52 Identities=4% Similarity=0.069 Sum_probs=39.8
Q ss_pred cEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcccccchhhhh-CCCCCCCcEEE
Q 021368 52 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYF-GITGEAPKVLA 112 (313)
Q Consensus 52 ~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~~~~~l~~~~-~v~~~~~P~i~ 112 (313)
.+++|+++| +.|+++.+.|.+.. +.|..+|.+ ......+.+.+ |+... |+++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~-~~~~~~l~~~~~~~~~v--P~l~ 60 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDAS-TSLRQEMVQRANGRNTF--PQIF 60 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSC-HHHHHHHHHHHHSSCCS--CEEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECC-HHHHHHHHHHhCCCCCc--CEEE
Confidence 466788889 99999999998763 556778887 21145788888 99888 9984
No 499
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.57 E-value=0.027 Score=38.57 Aligned_cols=49 Identities=10% Similarity=0.150 Sum_probs=33.6
Q ss_pred EEEEeCC----CCccchhhhHHHHHHHHHhcCCCcEEEEEEeCC-----Cccc------ccCCCC-----cCceEEE
Q 021368 182 LLEIYAP----WCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT-----TNEH------HRAKSD-----GFPTILF 238 (313)
Q Consensus 182 lv~fy~~----~C~~C~~~~~~~~~la~~~~~~~~v~~~~vd~~-----~~~~------~~~~v~-----~~P~i~~ 238 (313)
++.|+.+ ||+.|..+...|.+. ++.+-.+|++ .+.. ...+.. ++|.+++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~--------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i 70 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK--------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA 70 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT--------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc--------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE
Confidence 5678899 999999998887774 3556667776 3322 233555 7898764
No 500
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.43 E-value=0.037 Score=38.16 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=48.7
Q ss_pred ccEEEEEeeC-CchhhhhHHHHHHHHhccCeEEEEEEeCCCcc--cc----cchhhhhCCCCCCCcEEEEEcCCCCceec
Q 021368 51 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED--VG----KPVSEYFGITGEAPKVLAYTGNDDAKKHI 123 (313)
Q Consensus 51 ~~~v~f~~~~-~~c~~~~~~~~~~a~~~~~~v~f~~vd~~~~~--~~----~~l~~~~~v~~~~~P~i~~~~~~~~~~~~ 123 (313)
..+++|..+| +.|+++...|.++.-. +..+|.+..+ .. ..+.+.+|+... |++.+ ++. .
T Consensus 12 ~~v~ly~~~~Cp~C~~~~~~L~~~gi~------~~~~~v~~~~~~~~~~~~~~l~~~~g~~~v--P~l~~--~g~--~-- 77 (92)
T 3ic4_A 12 AEVLMYGLSTCPHCKRTLEFLKREGVD------FEVIWIDKLEGEERKKVIEKVHSISGSYSV--PVVVK--GDK--H-- 77 (92)
T ss_dssp SSSEEEECTTCHHHHHHHHHHHHHTCC------CEEEEGGGCCHHHHHHHHHHHHHHHSSSCS--CEEEE--TTE--E--
T ss_pred ceEEEEECCCChHHHHHHHHHHHcCCC------cEEEEeeeCCccchHHHHHHHHHhcCCCCc--CEEEE--CCE--E--
Confidence 3466777888 9999999999887533 3445555210 02 466778899877 99865 231 1
Q ss_pred cCCCCCHHHHHHHHH
Q 021368 124 LDGELTLDKIKTFGE 138 (313)
Q Consensus 124 ~~g~~~~~~i~~fi~ 138 (313)
-+..+.+.|.+++.
T Consensus 78 -i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 78 -VLGYNEEKLKELIR 91 (92)
T ss_dssp -EESCCHHHHHHHHH
T ss_pred -EeCCCHHHHHHHhc
Confidence 23468899888874
Done!