BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021373
         (313 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
           PE=2 SV=2
          Length = 291

 Score =  271 bits (692), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 151/227 (66%), Positives = 169/227 (74%), Gaps = 11/227 (4%)

Query: 72  NPNFVNF----QHQNPRPLN---PKNLLYR-LNCNKLKSSGEETKSVVNTGSGGGGGGDG 123
           NPNF+ F    Q   P+ LN     NL  R L+C  +K S E TKS     S   G G G
Sbjct: 30  NPNFIQFTPKSQLLFPQRLNFNTGTNLNRRTLSCYGIKDSSETTKS---APSLDSGDGGG 86

Query: 124 GGGDGSDDEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPT 183
           G G   D  E E ++   P WL+ TSDDA+TV  A+ +SLAFR F+AEPRYIPSLSMYPT
Sbjct: 87  GDGGDDDKGEVEEKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPT 146

Query: 184 FDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVRE 243
           FDVGDR+VAEKV+YYFRKPC+NDIVIFKSPPVLQEVGYTD DVFIKR+VAKEGD+VEV  
Sbjct: 147 FDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHN 206

Query: 244 GKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSH 290
           GKL+VNGV RNE +ILE P Y MTPI VPENSVFVMGDNRNNSYDSH
Sbjct: 207 GKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSH 253


>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
           thaliana GN=TPP1 PE=2 SV=2
          Length = 340

 Score =  197 bits (501), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 99/180 (55%), Positives = 130/180 (72%), Gaps = 8/180 (4%)

Query: 122 DGGGGDGSDDEEAEGQSGALPGWLN----ITSDDAKTVLAALVISLAFRSFVAEPRYIPS 177
           D GG    DD++ E ++G   GW+N    + S+DAK    A+ +S+ FRS +AEP+ IPS
Sbjct: 124 DKGGTVCDDDDDKESRNGG-SGWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPS 182

Query: 178 LSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQ---EVGYTDDDVFIKRVVAK 234
            SMYPT D GDR++AEKV+Y+FRKP  +DIVIFK+PP+L    E GY+ +DVFIKR+VA 
Sbjct: 183 TSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVAS 242

Query: 235 EGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPP 294
           EGD VEVR+GKL VN +V+ ED++LE  SY M P+ VP+  VFV+GDNRN S+DSH   P
Sbjct: 243 EGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGP 302


>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
           OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
          Length = 367

 Score =  194 bits (492), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/164 (57%), Positives = 121/164 (73%)

Query: 131 DEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRI 190
           D+ + G +G +   LNI S+DAK    A+ +SL FRS +AEP+ IPS SM PT DVGDR+
Sbjct: 166 DKVSNGGNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRV 225

Query: 191 VAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG 250
           +AEKV+Y+FRKP  +DIVIFK+PP+L E GY+  DVFIKR+VA EGD VEV +GKL+VN 
Sbjct: 226 IAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVND 285

Query: 251 VVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPP 294
            V+ ED++LE   Y M P+ VPE  VFV+GDNRN S+DSH   P
Sbjct: 286 TVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGP 329


>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
           / Kazusa) GN=lepB1 PE=3 SV=1
          Length = 196

 Score =  137 bits (345), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 83/125 (66%)

Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
           R FVAEPRYIPS SM PT + GDR+V EKV+Y+F  P   DI++F  P +LQ  GY    
Sbjct: 31  RFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQ 90

Query: 226 VFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNN 285
            FIKRV+A  G  VEV  G +  +G    E+YILE P YN+  + VP+  VFVMGDNRNN
Sbjct: 91  AFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNN 150

Query: 286 SYDSH 290
           S DSH
Sbjct: 151 SNDSH 155


>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
          Length = 203

 Score =  132 bits (332), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 92/141 (65%)

Query: 150 DDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVI 209
           +  KT+  ++V++L  R+FVAE RYIPS SM PT +V DR++ EK++Y+F  P   DI++
Sbjct: 30  EGIKTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIV 89

Query: 210 FKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPI 269
           F     L++   + ++ FIKRV+   G+ V+V  G++++NG    E+YI   P Y   P 
Sbjct: 90  FHPTEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPE 149

Query: 270 TVPENSVFVMGDNRNNSYDSH 290
            VP +S  V+GDNRNNSYDSH
Sbjct: 150 KVPADSFLVLGDNRNNSYDSH 170


>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
           / Kazusa) GN=lepB2 PE=3 SV=1
          Length = 218

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 93/147 (63%), Gaps = 6/147 (4%)

Query: 144 WLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPC 203
           WL +     KT++ A+++++  R+FVAE RYIPS SM PT  + DR++ EK++Y  R P 
Sbjct: 21  WLEL----GKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPE 76

Query: 204 SNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPS 263
             +IV+F     L+   +   D FIKR++   GD V V +G + VNG + +E+YI   P+
Sbjct: 77  RGEIVVFNPTDALKAKNF--HDAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPA 134

Query: 264 YNMTPITVPENSVFVMGDNRNNSYDSH 290
           Y   P+ VP++   V+GDNRNNSYDSH
Sbjct: 135 YEYGPVKVPDDQYLVLGDNRNNSYDSH 161


>sp|O33021|LEP_MYCLE Probable signal peptidase I OS=Mycobacterium leprae (strain TN)
           GN=lepB PE=3 SV=1
          Length = 289

 Score = 82.0 bits (201), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 83/178 (46%), Gaps = 42/178 (23%)

Query: 155 VLAALVISLAF--RSFVAEPRYIPSLSMYPTFD-----VGDRIVAEKVTYYFRKPCSNDI 207
           +LA + I L +   +FVA P  IPS SM PT       VGDRI+ +K+TY F  P   D+
Sbjct: 58  ILAVIAIGLYYVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDV 117

Query: 208 VIFKSPP---------------------VLQEVGYT--DDDVFIKRVVAKEGDVVEVR-E 243
           ++FK PP                      L  VG+   D++  +KRV+A  G  V+ R +
Sbjct: 118 IVFKGPPSWNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSD 177

Query: 244 GKLIVNGVVRNEDYILEAP-----------SYNMTPITVPENSVFVMGDNRNNSYDSH 290
             L VNG    E Y+                    P+TVP+  ++VMGDNR +S DS 
Sbjct: 178 TGLTVNGKPLKEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSR 235


>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
          Length = 294

 Score = 81.3 bits (199), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 40/183 (21%)

Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFD-----VGDRIVAEKVTYYFRKPCSND 206
           A   + A+V+     +FVA P  IPS SM PT       VGDRI+ +K++Y F  P   D
Sbjct: 69  AVLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGD 128

Query: 207 IVIFKSPP---------------------VLQEVGYT--DDDVFIKRVVAKEGDVVEVR- 242
           +++F+ PP                      L  +G+   D++  +KRV+A  G  V+ R 
Sbjct: 129 VIVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRS 188

Query: 243 EGKLIVNGVVRNEDYI-----LEAPSY------NMTPITVPENSVFVMGDNRNNSYDSHG 291
           +  L VNG    E Y+     +  PS          P+TVP   V+VMGDNR +S DS  
Sbjct: 189 DTGLTVNGRPLKEPYLDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSRA 248

Query: 292 APP 294
             P
Sbjct: 249 HCP 251


>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
           SV=1
          Length = 193

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 18/149 (12%)

Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFK 211
            K ++ A++++L  R F+ EP  +   SMYPT   G+R+   K   Y  +    DIVI  
Sbjct: 24  GKAIVIAVLLALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKTVNYIGELKRGDIVIIN 83

Query: 212 SPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYI----LEAPSYNMT 267
                   G T    ++KR++ K G+ V++++  L +NG    E Y+     EA    ++
Sbjct: 84  --------GETSKIHYVKRLIGKPGETVQMKDDTLYINGKKVAEPYLSKNKKEAEKLGVS 135

Query: 268 ------PITVPENSVFVMGDNRNNSYDSH 290
                 P+ VP+   FVMGDNR NS DS 
Sbjct: 136 LTGDFGPVKVPKGKYFVMGDNRLNSMDSR 164


>sp|P28628|LEPS_BACSU Signal peptidase I S OS=Bacillus subtilis (strain 168) GN=sipS PE=1
           SV=1
          Length = 184

 Score = 75.5 bits (184), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 21/150 (14%)

Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFK 211
           AK ++ A+V++L  R+F+  P  +   SMYPT    +R+       Y  +    DIV+  
Sbjct: 16  AKAIVIAVVLALLIRNFIFAPYVVDGDSMYPTLHNRERVFVNMTVKYIGEFDRGDIVVLN 75

Query: 212 SPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYI-----------LE 260
                      DD  ++KR++   GD VE++  +L +NG   +E Y+            +
Sbjct: 76  G----------DDVHYVKRIIGLPGDTVEMKNDQLYINGKKVDEPYLAANKKRAKQDGFD 125

Query: 261 APSYNMTPITVPENSVFVMGDNRNNSYDSH 290
             + +  P+ VP+N  FVMGDNR NS DS 
Sbjct: 126 HLTDDFGPVKVPDNKYFVMGDNRRNSMDSR 155


>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
          Length = 193

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 18/148 (12%)

Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFK 211
            K ++ A+ ++L  R F+ EP  +   SMYPT   G+R+   K   Y  +    DIVI  
Sbjct: 24  GKAIIIAVALALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKSVNYIGEIERGDIVIIN 83

Query: 212 SPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYIL----EAPSY--N 265
                   G T    ++KR++ K G+ VE++   L +NG    E Y+     EA     N
Sbjct: 84  --------GDTSKVHYVKRLIGKPGETVEMKNDTLYINGKKIAEPYLASNKKEAKKLGVN 135

Query: 266 MT----PITVPENSVFVMGDNRNNSYDS 289
           +T    P+ VP+   FVMGDNR NS DS
Sbjct: 136 LTGDFGPVKVPKGKYFVMGDNRLNSMDS 163


>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
           SV=1
          Length = 185

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 18/151 (11%)

Query: 150 DDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVI 209
           D  K +L AL++    R+F+ EP  +   SM PT    +R+   K   Y       DIV+
Sbjct: 14  DWIKAILIALILVFLVRTFLFEPYIVQGESMKPTLFNSERLFVNKFVKYTGDFKRGDIVV 73

Query: 210 FKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPS------ 263
                     G      ++KR++   GD +E++   L VNG   NE+Y+ E         
Sbjct: 74  LN--------GEEKKTHYVKRLIGLPGDTIEMKNDNLFVNGKRFNEEYLKENKKDAHDSD 125

Query: 264 YNMT----PITVPENSVFVMGDNRNNSYDSH 290
            N+T    PI VP++  FVMGDNR NS DS 
Sbjct: 126 LNLTGDFGPIKVPKDKYFVMGDNRQNSMDSR 156


>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
          Length = 186

 Score = 73.6 bits (179), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 25/170 (14%)

Query: 131 DEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRI 190
           +E++  +  +L  W+       K ++ A+V++L  R+F+ EP  +   SM PT   G+R+
Sbjct: 3   EEKSTNKKNSLFEWV-------KAIIIAVVLALLIRAFLFEPYLVEGTSMDPTLHDGERL 55

Query: 191 VAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG 250
              K   Y  +    DIVI          G   +  ++KR++   GD V++++  L +NG
Sbjct: 56  FVYKTVRYVGEFKRGDIVIID--------GDEKNVHYVKRLIGLPGDTVQMKDDTLYING 107

Query: 251 VVRNEDYI------LEAPSYNMT----PITVPENSVFVMGDNRNNSYDSH 290
              +E Y+       EA    +T    P+ VPE   FVMGDNR  S DS 
Sbjct: 108 KKVSEPYLSENRKEAEAVGVKLTGDFGPVKVPEGKYFVMGDNRQRSMDSR 157


>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
           PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
          Length = 284

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 79/181 (43%), Gaps = 50/181 (27%)

Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSN------ 205
            K+    L I L  RSF+ EP  IPS SM PT +VGD I+  K  Y  R P  +      
Sbjct: 63  GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEVGDFILVNKFAYGIRLPVLDTKVIPI 122

Query: 206 ------DIVIFKSPPVLQEVGYTDDDV-FIKRVVAKEGDVVE-VREGKLIVNGVVRNEDY 257
                 D+++F+ P        ++ ++ +IKRVV   GD V   +E +L VNG +  E  
Sbjct: 123 GDPQRGDVMVFRYP--------SEPNINYIKRVVGLPGDTVRYTKEKRLYVNGELVAEKL 174

Query: 258 ILEAPS-------------------------YNMTP---ITVPENSVFVMGDNRNNSYDS 289
           + E P                          Y + P    T+P    F+MGDNR+NS DS
Sbjct: 175 VGEEPGTLGSVTLYQEKLGQAEHLIRKEMSRYRIEPDRQWTIPAGHYFMMGDNRDNSNDS 234

Query: 290 H 290
            
Sbjct: 235 R 235


>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
          Length = 284

 Score = 67.0 bits (162), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 77/181 (42%), Gaps = 50/181 (27%)

Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSN------ 205
            K+    L I L  RSF+ EP  IPS SM PT DVGD I+  K +Y  R P  +      
Sbjct: 63  GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDVGDFILVNKFSYGIRLPVIDKKVIEV 122

Query: 206 ------DIVIFKSPPVLQEVGYTDDDV-FIKRVVAKEGDVVE-VREGKLIVNGVVRNEDY 257
                 D+++F+ P        +D +V +IKRVV   GDVV    + +L +NG    E  
Sbjct: 123 GDPQRGDVMVFRYP--------SDPNVNYIKRVVGLPGDVVRYTSDKRLFINGESVAEKL 174

Query: 258 ILEAPS-------------------------YNMTP---ITVPENSVFVMGDNRNNSYDS 289
           +   P+                         Y   P     VP    F+MGDNR+NS DS
Sbjct: 175 LGAEPNTLGSAELYQEKLGAVEHEIRKEMSRYRAMPDGQWKVPAGHYFMMGDNRDNSNDS 234

Query: 290 H 290
            
Sbjct: 235 R 235


>sp|P37943|LEPP_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=1
           SV=1
          Length = 186

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 18/149 (12%)

Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFK 211
            K ++ A++++L  R+F+ EP  +   SM PT    +R+   K   Y       DI+I  
Sbjct: 17  GKAIVIAVILALLIRNFLFEPYVVEGKSMDPTLVDSERLFVNKTVKYTGNFKRGDIIILN 76

Query: 212 SPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYI------LEAPSYN 265
                   G      ++KR++   GD VE++   L +NG    E Y+       +    N
Sbjct: 77  --------GKEKSTHYVKRLIGLPGDTVEMKNDHLFINGNEVKEPYLSYNKENAKKVGIN 128

Query: 266 MT----PITVPENSVFVMGDNRNNSYDSH 290
           +T    PI VP++  FVMGDNR  S DS 
Sbjct: 129 LTGDFGPIKVPKDKYFVMGDNRQESMDSR 157


>sp|P41026|LEP1_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipA PE=3 SV=1
          Length = 185

 Score = 66.2 bits (160), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 20/151 (13%)

Query: 150 DDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVI 209
           D AK ++ A+V+++  R+F+  P  +   SM PT    +RI       Y        IV+
Sbjct: 16  DWAKAIIIAVVLAVLIRNFLFAPYVVDGESMEPTLHDRERIFVNMTVKYISDFKRGQIVV 75

Query: 210 FKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYIL------EAPS 263
                        +++ ++KR++   GD V+++  +L +NG   +E Y+       +   
Sbjct: 76  LNG----------ENEHYVKRIIGLPGDTVQMKNDQLYINGKKVSEPYLAANKKKAKQDG 125

Query: 264 YNMT----PITVPENSVFVMGDNRNNSYDSH 290
           Y +T    P+ VP++  FVMGDNR NS DS 
Sbjct: 126 YTLTDDFGPVKVPDDKYFVMGDNRRNSMDSR 156


>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
           SV=1
          Length = 168

 Score = 63.2 bits (152), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 23/156 (14%)

Query: 156 LAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPV 215
           + ++V+++  ++ V     +  +SM PTF  G+ ++  K ++ F+     DIV+FK P  
Sbjct: 11  VVSVVLAIQVKNAVFIDYKVEGVSMNPTFQEGNELLVNKFSHRFKTIHRFDIVLFKGP-- 68

Query: 216 LQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPS----------YN 265
                  D  V IKRV+   G+ ++ ++ +L VNG    E ++    S          ++
Sbjct: 69  -------DHKVLIKRVIGLPGETIKYKDDQLYVNGKQVAEPFLKHLKSVSAGSHVTGDFS 121

Query: 266 MTPIT----VPENSVFVMGDNRNNSYDSHGAPPCQE 297
           +  +T    VP+   FV+GDNR  S+DS    P +E
Sbjct: 122 LKDVTGTSKVPKGKYFVVGDNRIYSFDSRHFGPIRE 157


>sp|O67088|LEP_AQUAE Signal peptidase I OS=Aquifex aeolicus (strain VF5) GN=lepB PE=3
           SV=1
          Length = 256

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 153 KTVLAALVISLA---FRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVI 209
           K ++   +I LA    R ++A+   IPS SM PT  VGD I+  K+ Y   +P   D+++
Sbjct: 3   KQIVELFLIILAVLFIREYIAQAYTIPSASMEPTLLVGDFILVNKLVYSLSEPMRGDMIV 62

Query: 210 FKSPPVLQEVGYTDDDVFIKRVVAKEGDVVE 240
           FK P          D  FIKR++A+ GD VE
Sbjct: 63  FKYPK-------NPDIDFIKRIIARGGDTVE 86


>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
           SV=2
          Length = 324

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 50/112 (44%), Gaps = 27/112 (24%)

Query: 142 PGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRK 201
           PGWL    +   +V   L I L  RSF+ EP  IPS SM PT  +GD I+ EK  Y  + 
Sbjct: 58  PGWL----ETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKD 113

Query: 202 PC------------SNDIVIFKSP--PVLQEVGYTDDDVFIKRVVAKEGDVV 239
           P               DIV+FK P  P L          +IKR V   GD V
Sbjct: 114 PIYQKTLIETGHPKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKV 156


>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
           / ATCC 700720) GN=lepB PE=3 SV=1
          Length = 324

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 50/112 (44%), Gaps = 27/112 (24%)

Query: 142 PGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRK 201
           PGWL    +   +V   L I L  RSF+ EP  IPS SM PT  +GD I+ EK  Y  + 
Sbjct: 58  PGWL----ETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKD 113

Query: 202 PC------------SNDIVIFKSP--PVLQEVGYTDDDVFIKRVVAKEGDVV 239
           P               DIV+FK P  P L          +IKR V   GD +
Sbjct: 114 PIYQKTLIETGHPKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKI 156


>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
          Length = 324

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 50/112 (44%), Gaps = 27/112 (24%)

Query: 142 PGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRK 201
           PGWL    +   +V   L I L  RSF+ EP  IPS SM PT  +GD I+ EK  Y  + 
Sbjct: 58  PGWL----ETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKD 113

Query: 202 PC------------SNDIVIFKSP--PVLQEVGYTDDDVFIKRVVAKEGDVV 239
           P               DIV+FK P  P L          +IKR V   GD +
Sbjct: 114 PIYQKTLIETGHPKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKI 156


>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
           pisum (strain APS) GN=lepB PE=3 SV=1
          Length = 314

 Score = 52.4 bits (124), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 9/90 (10%)

Query: 156 LAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPV 215
           LA  +I    RSF+ EP  IPS SM PT  VGD I+ EK +Y  ++P ++ I+I    P 
Sbjct: 69  LAIFII----RSFIYEPFQIPSGSMMPTLLVGDFILVEKFSYGIKEPITHKILIRTKKPN 124

Query: 216 LQEVGY----TDDDV-FIKRVVAKEGDVVE 240
             ++      TD ++ +IKR++   GD + 
Sbjct: 125 RGDIAVFQHPTDHNINYIKRIIGLPGDKIR 154



 Score = 32.3 bits (72), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 235 EGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDS 289
           E  + +V+   L++N +   ++   +  +       VP+   F+MGDNR+NS DS
Sbjct: 218 EEIIEDVKHSILLLNSIKNTKENYFQQKNMPKLTWIVPKGEYFMMGDNRDNSLDS 272


>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
           PE=3 SV=2
          Length = 191

 Score = 52.0 bits (123), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
           ++  A VI      F+  P  I   SM PT   G+R+    V Y        ++V+F + 
Sbjct: 11  SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHA- 69

Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
                     +D ++KRV+   GD VE +   L VNG  ++E            DYI   
Sbjct: 70  --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121

Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPPCQE 297
               + P+ N     +P+    V+GDNR  S DS       E
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDE 163


>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
           PE=3 SV=1
          Length = 191

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
           ++  A VI      F+  P  I   SM PT   G+R+    + Y        ++V+F + 
Sbjct: 11  SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69

Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
                     +D ++KRV+   GD VE +   L VNG  ++E            DYI   
Sbjct: 70  --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121

Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPPCQE 297
               + P+ N     +P+    V+GDNR  S DS       E
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDE 163


>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
          Length = 191

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
           ++  A VI      F+  P  I   SM PT   G+R+    + Y        ++V+F + 
Sbjct: 11  SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69

Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
                     +D ++KRV+   GD VE +   L VNG  ++E            DYI   
Sbjct: 70  --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121

Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPPCQE 297
               + P+ N     +P+    V+GDNR  S DS       E
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDE 163


>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
           GN=spsB PE=3 SV=1
          Length = 191

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
           ++  A VI      F+  P  I   SM PT   G+R+    + Y        ++V+F + 
Sbjct: 11  SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69

Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
                     +D ++KRV+   GD VE +   L VNG  ++E            DYI   
Sbjct: 70  --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121

Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPPCQE 297
               + P+ N     +P+    V+GDNR  S DS       E
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDE 163


>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
           PE=1 SV=1
          Length = 191

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
           ++  A VI      F+  P  I   SM PT   G+R+    + Y        ++V+F + 
Sbjct: 11  SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69

Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
                     +D ++KRV+   GD VE +   L VNG  ++E            DYI   
Sbjct: 70  --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121

Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPPCQE 297
               + P+ N     +P+    V+GDNR  S DS       E
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDE 163


>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
           700699) GN=spsB PE=3 SV=1
          Length = 191

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
           ++  A VI      F+  P  I   SM PT   G+R+    + Y        ++V+F + 
Sbjct: 11  SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69

Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
                     +D ++KRV+   GD VE +   L VNG  ++E            DYI   
Sbjct: 70  --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121

Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPPCQE 297
               + P+ N     +P+    V+GDNR  S DS       E
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDE 163


>sp|Q8K9R0|LEP_BUCAP Signal peptidase I OS=Buchnera aphidicola subsp. Schizaphis
           graminum (strain Sg) GN=lepB PE=3 SV=1
          Length = 312

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 20/99 (20%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSN-------- 205
           ++     I    RSF+ EP  IPS SM PT  +GD I+ +K +Y  ++P +N        
Sbjct: 63  SLFPTFFIVFIIRSFIYEPFQIPSGSMMPTLLIGDFILVKKFSYGIKEPITNKTIIKMNL 122

Query: 206 ----DIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVE 240
               DIV+FK P         ++  +IKRVV   GD ++
Sbjct: 123 PQRGDIVVFKHPK--------NNIDYIKRVVGLPGDKIQ 153



 Score = 36.2 bits (82), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 19/122 (15%)

Query: 184 FDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQ--------------EVGYTDDDVFIK 229
           +D+  + +   + Y  +K C N + I  S P L               E     + ++ K
Sbjct: 154 YDINRKKIKICINYTNQKNCENKLFITYSKPKLSNFFQKIYLLKSRTNEEEKVYNSIYFK 213

Query: 230 RVVAKEGDVVEVREGKLIVNGV-VRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYD 288
           +V   E  +  ++   LI++G+  +  DY  +     +  I VP+N  F+MGDNR+NS D
Sbjct: 214 KV---EEKINNLKHNILILDGINSKINDYYQQKGMPKLIWI-VPKNKYFMMGDNRDNSLD 269

Query: 289 SH 290
           S 
Sbjct: 270 SR 271


>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
           GN=spsB PE=3 SV=1
          Length = 191

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
           ++  A VI      F+  P  I   SM PT   G+R+    + Y        ++V+F + 
Sbjct: 11  SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69

Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
                     +D ++KRV+   GD VE +   L VNG  ++E            DYI   
Sbjct: 70  --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121

Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHGAPPCQE 297
               + P+ N     +P+    V+GDNR  S DS       E
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDE 163


>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
           pistaciae (strain Bp) GN=lepB PE=3 SV=1
          Length = 310

 Score = 51.2 bits (121), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 5/86 (5%)

Query: 159 LVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQE 218
           L+I    R+F+ EP  IPS SM PT   GD I+ +K +Y  + P SN++++F + P   +
Sbjct: 62  LIIVFIIRTFICEPFQIPSESMMPTLLPGDFILVKKFSYGIKNPFSNNVIVFINTPKRGD 121

Query: 219 V---GYTDDDV--FIKRVVAKEGDVV 239
           +    + +++   ++KR+V   GD +
Sbjct: 122 IVVFKHPNNNAINYVKRIVGLPGDKI 147


>sp|A8GYE1|LEP_RICB8 Signal peptidase I OS=Rickettsia bellii (strain OSU 85-389) GN=lepB
           PE=3 SV=1
          Length = 289

 Score = 48.5 bits (114), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 66/225 (29%)

Query: 148 TSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY---------- 197
           T+ + K+ +  +VI+L  R  + E   +P+ SM  T    DRI   K +Y          
Sbjct: 37  TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 96

Query: 198 ----------YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLI 247
                     + R P   DI+IF+ P  +       +  +IKR++   GD V++ +  + 
Sbjct: 97  DFIHLFKGRIFARTPERGDIIIFRPPHEM-------NTRYIKRLIGLPGDKVQLIDDVIY 149

Query: 248 VNG--VVRNED--YILEAP-----------------SYNMTPIT---------------V 271
           +N   + R E   Y+ E                   SY + P+                V
Sbjct: 150 INDEKIERVESGIYVSEEGRKYLKFKETLPNGKTYFSYKLAPVLGIMFNDKYGNTDAFYV 209

Query: 272 PENSVFVMGDNRNNSYDSH---GAPPCQEYHRKISISLLASAKDW 313
           PE   F +GDNR+ S DS    G  P + +  K      ++   W
Sbjct: 210 PEGEYFFLGDNRDQSNDSRIDLGFVPFENFIAKAQFIWFSTKITW 254


>sp|Q1RHA1|LEP_RICBR Signal peptidase I OS=Rickettsia bellii (strain RML369-C) GN=lepB
           PE=3 SV=1
          Length = 291

 Score = 48.1 bits (113), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 66/225 (29%)

Query: 148 TSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY---------- 197
           T+ + K+ +  +VI+L  R  + E   +P+ SM  T    DRI   K +Y          
Sbjct: 39  TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 98

Query: 198 ----------YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLI 247
                     + R P   DI+IF+ P  +       +  +IKR++   GD V++ +  + 
Sbjct: 99  DFIHLFKGRIFARTPERGDIIIFRPPHEM-------NTRYIKRLIGLPGDKVQLIDDVIY 151

Query: 248 VNG--VVRNED--YILEAP-----------------SYNMTPIT---------------V 271
           +N   + R E   Y+ E                   SY + P+                V
Sbjct: 152 INDEKIERVESGIYVSEEGRKYLKFKETLPNGKTYFSYKLAPVLGIMFNDKYGNTDAFYV 211

Query: 272 PENSVFVMGDNRNNSYDSH---GAPPCQEYHRKISISLLASAKDW 313
           PE   F +GDNR+ S DS    G  P + +  K      ++   W
Sbjct: 212 PEGEYFFLGDNRDQSNDSRIDLGFVPFENFIAKAQFIWFSTKITW 256


>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
          Length = 182

 Score = 47.8 bits (112), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 23/149 (15%)

Query: 156 LAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPV 215
             A+ +    R FV     +   SM PT + G+ ++  K++Y        DI++F +   
Sbjct: 15  FVAVCVVATLRLFVFSNYVVEGKSMMPTLESGNLLIVNKLSYDIGPIRRFDIIVFHA--- 71

Query: 216 LQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPS----------YN 265
                    + ++KRV+   GD +  +   L VNG   +E Y+               + 
Sbjct: 72  ------NKKEDYVKRVIGLPGDRIAYKNDILYVNGKKVDEPYLRPYKQKLLDGRLTGDFT 125

Query: 266 MTPIT----VPENSVFVMGDNRNNSYDSH 290
           +  +T    VP   +FV+GDNR +S+DS 
Sbjct: 126 LEEVTGKTRVPPGCIFVLGDNRLSSWDSR 154


>sp|P42959|LEPU_BACSU Signal peptidase I U OS=Bacillus subtilis (strain 168) GN=sipU PE=1
           SV=1
          Length = 187

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 19/145 (13%)

Query: 155 VLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPP 214
           ++AAL+ ++  R    +P  I   SM PT    +RI+ +K   +       DI++     
Sbjct: 24  MIAALIFTI--RLVFYKPFLIEGSSMAPTLKDSERILVDKAVKWTGGFHRGDIIVIHD-- 79

Query: 215 VLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILE------APSYNMT- 267
             ++ G +    F+KR++   GD ++++  +L +N     E Y+ E           +T 
Sbjct: 80  --KKSGRS----FVKRLIGLPGDSIKMKNDQLYINDKKVEEPYLKEYKQEVKESGVTLTG 133

Query: 268 --PITVPENSVFVMGDNRNNSYDSH 290
              + VP    FVMGDNR NS DS 
Sbjct: 134 DFEVEVPSGKYFVMGDNRLNSLDSR 158


>sp|Q4UKA7|LEP_RICFE Signal peptidase I OS=Rickettsia felis (strain ATCC VR-1525 /
           URRWXCal2) GN=lepB PE=3 SV=1
          Length = 266

 Score = 45.4 bits (106), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 81/215 (37%), Gaps = 66/215 (30%)

Query: 158 ALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY-------------------- 197
            + I+L  R  + EP  +P+ SM  T    D I + K +Y                    
Sbjct: 24  VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83

Query: 198 YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG--VVRNE 255
           + R+P   DIV+F+ PP    V Y      IKR++   GD +++ +  + +N   + R E
Sbjct: 84  FAREPERGDIVVFR-PPNDMNVRY------IKRLIGLPGDKIQLIDDVIYINDKKIERTE 136

Query: 256 --DYILEAP-----------------SYNMTPI---------------TVPENSVFVMGD 281
              YI E                   SY + PI                VPE   F +GD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIFGVIYNDRYGNTDVFYVPEGKYFFLGD 196

Query: 282 NRNNSYDSH---GAPPCQEYHRKISISLLASAKDW 313
           NR+ S DS    G  P + +  K     L++   W
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQFIWLSTKITW 231


>sp|P44454|LEP_HAEIN Signal peptidase I OS=Haemophilus influenzae (strain ATCC 51907 /
           DSM 11121 / KW20 / Rd) GN=lepB PE=3 SV=1
          Length = 349

 Score = 45.4 bits (106), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 91/252 (36%), Gaps = 86/252 (34%)

Query: 148 TSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFR------- 200
            S+   ++   L +    RSF+ EP  IPS SM  T  VGD +V  K  Y  +       
Sbjct: 84  ASEFLSSLFPVLAVVFLVRSFLFEPFQIPSGSMESTLRVGDFLVVNKYAYGVKDPIFQNT 143

Query: 201 -----KPCSNDIVIFKSP-PVLQEVGY--------------TDDDV----FIKRVVAKEG 236
                KP   D+++FK+P   L   G               + D++    +IKR+V K G
Sbjct: 144 IIAGEKPQRGDVIVFKAPQQALIRTGLGATRAAFAENLALSSKDNMSGVDYIKRIVGKGG 203

Query: 237 D------------VVEVREGK---------------------------LIVNGVVRNEDY 257
           D            VV  +EGK                           L   G V +   
Sbjct: 204 DRVIFDVEQKTLKVVYGKEGKPCEIDCETKAFEYTQNPTNPAFPNELELTEKGDVTHNVL 263

Query: 258 ILEAPSYN-----------MTPITVPENSVFVMGDNRNNSYDSH--GAPPCQEYHRK--- 301
           I E   Y+                VPE   FVMGD+R++S DS   G  P +    K   
Sbjct: 264 ISEYRRYSDLEFFPQEGMQTAEWLVPEGQYFVMGDHRDHSDDSRFWGFVPEKNIVGKATY 323

Query: 302 ISISLLASAKDW 313
           I +SL   A +W
Sbjct: 324 IWMSLEKEANEW 335


>sp|Q6GIC4|LEPH_STAAR Inactive signal peptidase IA OS=Staphylococcus aureus (strain
           MRSA252) GN=spsA PE=3 SV=1
          Length = 174

 Score = 45.1 bits (105), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 18/133 (13%)

Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
           ++FV     IP+  M PT + GDR++  K+   F +  + DI+ ++            ++
Sbjct: 22  QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71

Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
           ++  R++AK G  +  R+G+L      V+        I +    N   +    +P N+  
Sbjct: 72  IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKKLDGDIIPPNNFV 131

Query: 278 VMGDNRNNSYDSH 290
           V+ D+ NN +DS 
Sbjct: 132 VLNDHDNNQHDSR 144


>sp|P0A065|LEPH_STAAW Inactive signal peptidase IA OS=Staphylococcus aureus (strain MW2)
           GN=spsA PE=3 SV=1
          Length = 174

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 18/133 (13%)

Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
           ++FV     IP+  M PT + GDR++  K+   F +  + DI+ ++            ++
Sbjct: 22  QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71

Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
           ++  R++AK G  +  R+G+L      V+        I +    N   +    +P N+  
Sbjct: 72  IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131

Query: 278 VMGDNRNNSYDSH 290
           V+ D+ NN +DS 
Sbjct: 132 VLNDHDNNQHDSR 144


>sp|P0A066|LEPH_STAAU Inactive signal peptidase IA OS=Staphylococcus aureus GN=spsA PE=3
           SV=1
          Length = 174

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 18/133 (13%)

Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
           ++FV     IP+  M PT + GDR++  K+   F +  + DI+ ++            ++
Sbjct: 22  QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71

Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
           ++  R++AK G  +  R+G+L      V+        I +    N   +    +P N+  
Sbjct: 72  IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131

Query: 278 VMGDNRNNSYDSH 290
           V+ D+ NN +DS 
Sbjct: 132 VLNDHDNNQHDSR 144


>sp|Q6GAW2|LEPH_STAAS Inactive signal peptidase IA OS=Staphylococcus aureus (strain
           MSSA476) GN=spsA PE=3 SV=1
          Length = 174

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 18/133 (13%)

Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
           ++FV     IP+  M PT + GDR++  K+   F +  + DI+ ++            ++
Sbjct: 22  QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71

Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
           ++  R++AK G  +  R+G+L      V+        I +    N   +    +P N+  
Sbjct: 72  IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131

Query: 278 VMGDNRNNSYDSH 290
           V+ D+ NN +DS 
Sbjct: 132 VLNDHDNNQHDSR 144


>sp|P0A064|LEPH_STAAN Inactive signal peptidase IA OS=Staphylococcus aureus (strain N315)
           GN=spsA PE=3 SV=1
          Length = 174

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 18/133 (13%)

Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
           ++FV     IP+  M PT + GDR++  K+   F +  + DI+ ++            ++
Sbjct: 22  QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71

Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
           ++  R++AK G  +  R+G+L      V+        I +    N   +    +P N+  
Sbjct: 72  IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131

Query: 278 VMGDNRNNSYDSH 290
           V+ D+ NN +DS 
Sbjct: 132 VLNDHDNNQHDSR 144


>sp|P0A063|LEPH_STAAM Inactive signal peptidase IA OS=Staphylococcus aureus (strain Mu50
           / ATCC 700699) GN=spsA PE=3 SV=1
          Length = 174

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 18/133 (13%)

Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
           ++FV     IP+  M PT + GDR++  K+   F +  + DI+ ++            ++
Sbjct: 22  QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71

Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
           ++  R++AK G  +  R+G+L      V+        I +    N   +    +P N+  
Sbjct: 72  IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131

Query: 278 VMGDNRNNSYDSH 290
           V+ D+ NN +DS 
Sbjct: 132 VLNDHDNNQHDSR 144


>sp|A8GM78|LEP_RICAH Signal peptidase I OS=Rickettsia akari (strain Hartford) GN=lepB
           PE=3 SV=1
          Length = 266

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 80/215 (37%), Gaps = 66/215 (30%)

Query: 158 ALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY-------------------- 197
            + I+L  R  + EP  +P+ SM  T    D I + K +Y                    
Sbjct: 24  VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83

Query: 198 YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVN-------- 249
           + R+P   DIV+F+ PP    V Y      IKR++   GD +++ +  + +N        
Sbjct: 84  FAREPERGDIVVFR-PPNDMNVRY------IKRLIGLPGDKIQLIDDVIYINDKKIERTE 136

Query: 250 -GVVRNEDYILEAP------------SYNMTPI---------------TVPENSVFVMGD 281
            G   +ED I                SY + PI                VPE   F +GD
Sbjct: 137 VGTYTSEDGIKYLKFKETLPNGRTYFSYKLAPIFSVIYNDRYGNTDVFYVPEGKYFFLGD 196

Query: 282 NRNNSYDSH---GAPPCQEYHRKISISLLASAKDW 313
           NR+ S DS    G  P + +  K      ++  +W
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQFIWFSTKINW 231


>sp|Q5HHC0|LEPH_STAAC Inactive signal peptidase IA OS=Staphylococcus aureus (strain COL)
           GN=spsA PE=3 SV=1
          Length = 174

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 18/133 (13%)

Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
           ++FV     IP+  M PT + GDR++  K+   F +  + DI+ ++            ++
Sbjct: 22  QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71

Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
           ++  R++AK G  +  R+G+L      V+        I +    N   +    +P N+  
Sbjct: 72  IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131

Query: 278 VMGDNRNNSYDSH 290
           V+ D  NN +DS 
Sbjct: 132 VLNDQDNNKHDSR 144


>sp|A8F0M1|LEP_RICM5 Signal peptidase I OS=Rickettsia massiliae (strain Mtu5) GN=lepB
           PE=3 SV=2
          Length = 266

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 82/219 (37%), Gaps = 66/219 (30%)

Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY---------------- 197
           + +  + I+L  R  + EP  +P+ SM  T    D I + K +Y                
Sbjct: 20  SFVFVICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLF 79

Query: 198 ----YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG--V 251
               + R+P   DIV+F+ PP    V Y      IKR++   GD +++ +  + +N   +
Sbjct: 80  KGRIFAREPERGDIVVFR-PPHDMSVRY------IKRLIGLPGDKIQLIDDVIYINDKKI 132

Query: 252 VRNE--DYILEAP-----------------SYNMTPI---------------TVPENSVF 277
            R E   YI E                   SY + PI                VPE   F
Sbjct: 133 ERTEVGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYGNTDVFYVPEGKYF 192

Query: 278 VMGDNRNNSYDSH---GAPPCQEYHRKISISLLASAKDW 313
            +GDNR+ S DS    G  P + +  K      ++   W
Sbjct: 193 FLGDNRDQSNDSRVNLGFVPFENFIAKAQFIWFSTKITW 231


>sp|A8GQT7|LEP_RICRS Signal peptidase I OS=Rickettsia rickettsii (strain Sheila Smith)
           GN=lepB PE=1 SV=1
          Length = 266

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 80/215 (37%), Gaps = 66/215 (30%)

Query: 158 ALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY-------------------- 197
            + I+L  R  + EP  +P+ SM  T    D I + K +Y                    
Sbjct: 24  VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83

Query: 198 YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG--VVRNE 255
           + R+P   DIV+F+ PP    V Y      IKR++   GD +++ +  + +N   + R E
Sbjct: 84  FAREPDRGDIVVFR-PPNDMSVRY------IKRLIGLPGDKIQLIDDVIYINDKKIERTE 136

Query: 256 --DYILEAP-----------------SYNMTPI---------------TVPENSVFVMGD 281
              YI E                   SY + PI                VPE   F +GD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYGNTDVFYVPEGKYFFLGD 196

Query: 282 NRNNSYDSH---GAPPCQEYHRKISISLLASAKDW 313
           NR+ S DS    G  P + +  K      ++   W
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQFIWFSTKITW 231


>sp|Q92JB1|LEP_RICCN Signal peptidase I OS=Rickettsia conorii (strain ATCC VR-613 /
           Malish 7) GN=lepB PE=3 SV=1
          Length = 266

 Score = 43.9 bits (102), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 80/215 (37%), Gaps = 66/215 (30%)

Query: 158 ALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY-------------------- 197
            + I+L  R  + EP  +P+ SM  T    D I + K +Y                    
Sbjct: 24  VICIALLIRILIMEPFNVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83

Query: 198 YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG--VVRNE 255
           + R+P   DIV+F+ PP    V Y      IKR++   GD +++ +  + +N   + R E
Sbjct: 84  FAREPDRGDIVVFR-PPNDMSVRY------IKRLIGLPGDKIQLIDDVIYINDKKIERTE 136

Query: 256 --DYILEAP-----------------SYNMTPI---------------TVPENSVFVMGD 281
              YI E                   SY + PI                VPE   F +GD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYSNTDVFYVPEGQYFFLGD 196

Query: 282 NRNNSYDSH---GAPPCQEYHRKISISLLASAKDW 313
           NR+ S DS    G  P + +  K      ++   W
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQFIWFSTKITW 231


>sp|Q9ZE32|LEP_RICPR Signal peptidase I OS=Rickettsia prowazekii (strain Madrid E)
           GN=lepB PE=3 SV=1
          Length = 264

 Score = 43.5 bits (101), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 78/215 (36%), Gaps = 66/215 (30%)

Query: 158 ALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY-------------------- 197
            + I+L  R  + EP  +P+ SM  T    D I + K +Y                    
Sbjct: 22  VICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIHLFKGRV 81

Query: 198 YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVN-------- 249
           + R+P   DIV+F+ PP    V Y      IKR++   GD +++ +  + +N        
Sbjct: 82  FAREPERGDIVVFR-PPNDMSVRY------IKRLIGLPGDKIQLIDDVIYINDKKIERTE 134

Query: 250 -GVVRNEDYILEAP------------SYNMTPI---------------TVPENSVFVMGD 281
            G    ED I                SY + PI                VPE   F +GD
Sbjct: 135 VGTYIGEDGIKYLKFKETLPNGRTYFSYKLAPIFGVIPSDRYSNTDVFYVPEGQYFFLGD 194

Query: 282 NRNNSYDSH---GAPPCQEYHRKISISLLASAKDW 313
           NR+ S DS    G  P + +  K      ++   W
Sbjct: 195 NRDRSNDSRVNLGFVPFENFIAKAQFIWFSTKITW 229


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.135    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,606,275
Number of Sequences: 539616
Number of extensions: 5939692
Number of successful extensions: 54579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 44088
Number of HSP's gapped (non-prelim): 6991
length of query: 313
length of database: 191,569,459
effective HSP length: 117
effective length of query: 196
effective length of database: 128,434,387
effective search space: 25173139852
effective search space used: 25173139852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)