Query 021375
Match_columns 313
No_of_seqs 286 out of 1396
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 02:27:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021375.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021375hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00052 prolyl 4-hydroxylase; 100.0 1.5E-81 3.2E-86 592.5 26.5 264 49-313 38-308 (310)
2 KOG1591 Prolyl 4-hydroxylase a 100.0 9.1E-55 2E-59 406.0 15.2 199 49-260 81-288 (289)
3 smart00702 P4Hc Prolyl 4-hydro 100.0 1.3E-36 2.9E-41 265.7 17.4 172 65-255 1-178 (178)
4 PRK05467 Fe(II)-dependent oxyg 99.9 2.4E-25 5.1E-30 201.9 14.5 167 67-260 2-182 (226)
5 PHA02869 C4L/C10L-like gene fa 99.6 6.3E-16 1.4E-20 148.1 9.7 134 90-252 45-187 (418)
6 PHA02813 hypothetical protein; 99.6 1.2E-15 2.6E-20 144.3 11.1 150 78-258 24-186 (354)
7 PF13640 2OG-FeII_Oxy_3: 2OG-F 99.5 1.6E-14 3.5E-19 114.3 7.5 95 144-255 1-100 (100)
8 COG3128 PiuC Uncharacterized i 99.2 1.2E-10 2.5E-15 101.6 9.9 164 67-258 4-183 (229)
9 smart00254 ShKT ShK toxin doma 99.1 2.8E-11 6.1E-16 77.5 1.2 33 273-313 1-33 (33)
10 PF01549 ShK: ShK domain-like; 98.7 1.2E-09 2.6E-14 71.6 -0.5 36 272-313 1-38 (38)
11 PF03171 2OG-FeII_Oxy: 2OG-Fe( 98.3 3.8E-07 8.1E-12 71.7 3.5 89 142-255 2-97 (98)
12 PF13661 2OG-FeII_Oxy_4: 2OG-F 98.3 9.3E-07 2E-11 66.0 4.2 51 141-195 10-65 (70)
13 KOG3710 EGL-Nine (EGLN) protei 98.2 2.4E-05 5.2E-10 70.7 12.5 168 66-260 54-243 (280)
14 PF03336 Pox_C4_C10: Poxvirus 98.2 5.8E-06 1.3E-10 78.7 8.9 120 107-251 39-164 (339)
15 PHA02866 Hypothetical protein; 98.0 2.5E-05 5.5E-10 73.0 7.9 131 90-254 32-167 (333)
16 TIGR02408 ectoine_ThpD ectoine 97.8 0.0002 4.3E-09 67.2 11.2 188 53-252 17-245 (277)
17 COG3751 EGL-9 Predicted prolin 97.4 0.00096 2.1E-08 61.7 8.9 102 142-259 136-243 (252)
18 PF05721 PhyH: Phytanoyl-CoA d 97.2 0.00085 1.8E-08 58.1 6.9 162 67-245 6-206 (211)
19 PF09859 Oxygenase-NA: Oxygena 97.1 0.0019 4.1E-08 55.9 7.1 101 143-256 63-172 (173)
20 TIGR01762 chlorin-enz chlorina 96.4 0.045 9.7E-07 51.8 12.0 176 63-254 13-247 (288)
21 PF13759 2OG-FeII_Oxy_5: Putat 96.1 0.013 2.9E-07 46.3 5.5 70 172-250 20-98 (101)
22 TIGR02466 conserved hypothetic 95.7 0.098 2.1E-06 47.0 10.0 88 143-250 97-194 (201)
23 PF12851 Tet_JBP: Oxygenase do 95.5 0.047 1E-06 47.8 6.9 79 153-255 86-170 (171)
24 KOG3844 Predicted component of 94.0 0.27 5.8E-06 48.3 8.5 116 124-260 99-221 (476)
25 PF13532 2OG-FeII_Oxy_2: 2OG-F 93.8 0.35 7.6E-06 42.2 8.2 152 67-245 2-177 (194)
26 PHA02923 hypothetical protein; 92.0 0.24 5.2E-06 46.8 4.8 102 119-256 42-145 (315)
27 KOG3371 Uncharacterized conser 89.1 0.12 2.5E-06 47.7 0.0 38 270-313 24-62 (243)
28 PRK15401 alpha-ketoglutarate-d 83.5 35 0.00075 31.0 13.4 158 63-245 16-196 (213)
29 PLN02485 oxidoreductase 82.4 4.3 9.4E-05 38.9 7.1 110 124-259 157-290 (329)
30 KOG3200 Uncharacterized conser 80.4 7.2 0.00016 34.5 7.0 94 60-161 7-108 (224)
31 PLN02984 oxidoreductase, 2OG-F 79.9 14 0.00031 35.8 9.7 107 124-258 172-300 (341)
32 COG3826 Uncharacterized protei 79.7 15 0.00033 32.7 8.8 103 142-257 124-235 (236)
33 KOG3959 2-Oxoglutarate- and ir 77.4 3.5 7.5E-05 38.1 4.3 94 64-162 71-175 (306)
34 PLN03001 oxidoreductase, 2OG-F 76.9 14 0.0003 34.4 8.4 111 121-259 87-216 (262)
35 PLN02639 oxidoreductase, 2OG-F 75.7 19 0.00042 34.7 9.3 108 125-259 165-291 (337)
36 PLN02299 1-aminocyclopropane-1 73.7 26 0.00056 33.6 9.5 90 143-259 159-259 (321)
37 PLN00417 oxidoreductase, 2OG-F 72.9 20 0.00044 34.8 8.7 108 125-259 177-304 (348)
38 PLN02365 2-oxoglutarate-depend 70.1 19 0.00041 34.1 7.7 112 122-258 124-251 (300)
39 PLN02216 protein SRG1 69.9 24 0.00052 34.4 8.5 107 125-258 184-310 (357)
40 PF06822 DUF1235: Protein of u 69.8 24 0.00052 33.1 7.9 110 119-260 31-141 (266)
41 PLN02276 gibberellin 20-oxidas 69.1 32 0.00069 33.5 9.1 90 142-259 206-306 (361)
42 PLN02997 flavonol synthase 68.4 17 0.00037 34.9 7.0 89 143-259 184-283 (325)
43 PLN02750 oxidoreductase, 2OG-F 67.8 32 0.00069 33.3 8.8 110 124-259 167-295 (345)
44 PLN02904 oxidoreductase 66.6 37 0.0008 33.1 9.0 105 125-258 183-307 (357)
45 PLN02912 oxidoreductase, 2OG-F 65.9 31 0.00067 33.5 8.3 107 125-259 172-297 (348)
46 PLN02403 aminocyclopropanecarb 64.7 23 0.00049 33.8 7.0 50 209-259 201-255 (303)
47 PLN02758 oxidoreductase, 2OG-F 63.4 59 0.0013 31.7 9.8 108 124-258 185-312 (361)
48 PLN02515 naringenin,2-oxogluta 62.9 32 0.0007 33.5 7.8 50 209-259 244-297 (358)
49 PLN02947 oxidoreductase 62.3 46 0.00099 32.7 8.8 69 174-258 252-324 (374)
50 PHA02985 hypothetical protein; 61.7 36 0.00077 31.9 7.3 108 119-260 38-146 (271)
51 PLN02254 gibberellin 3-beta-di 61.1 46 0.00099 32.5 8.5 89 143-258 211-310 (358)
52 KOG0143 Iron/ascorbate family 59.2 55 0.0012 31.5 8.6 85 143-255 177-274 (322)
53 PRK11875 psbT photosystem II r 58.1 13 0.00028 23.3 2.6 22 1-22 1-22 (31)
54 PLN02393 leucoanthocyanidin di 57.8 69 0.0015 31.2 9.1 90 143-259 214-314 (362)
55 PF07172 GRP: Glycine rich pro 57.6 9.7 0.00021 30.1 2.6 20 1-20 1-20 (95)
56 COG4340 Uncharacterized protei 55.2 32 0.00068 30.8 5.6 52 177-244 148-201 (226)
57 PF02668 TauD: Taurine catabol 55.1 13 0.00029 33.2 3.4 38 208-253 219-258 (258)
58 PLN02704 flavonol synthase 54.8 31 0.00068 33.2 6.2 88 144-259 201-299 (335)
59 COG3145 AlkB Alkylated DNA rep 53.0 1.7E+02 0.0037 26.2 10.4 97 108-223 71-170 (194)
60 CHL00031 psbT photosystem II p 52.1 18 0.00038 23.0 2.6 22 1-22 1-22 (33)
61 PLN02156 gibberellin 2-beta-di 50.9 99 0.0022 29.9 8.9 90 143-259 179-281 (335)
62 PLN03002 oxidoreductase, 2OG-F 49.6 53 0.0012 31.6 6.8 92 143-258 183-286 (332)
63 PLN03178 leucoanthocyanidin di 47.8 96 0.0021 30.1 8.4 87 143-258 212-310 (360)
64 PF01405 PsbT: Photosystem II 45.8 22 0.00047 22.0 2.2 21 1-21 1-21 (29)
65 PF10014 2OG-Fe_Oxy_2: 2OG-Fe 42.8 41 0.00089 29.9 4.5 106 119-244 69-179 (195)
66 cd00250 CAS_like Clavaminic ac 42.1 32 0.00069 31.5 3.8 40 208-255 218-260 (262)
67 PTZ00273 oxidase reductase; Pr 40.4 99 0.0022 29.4 7.1 108 124-259 151-278 (320)
68 COG3491 PcbC Isopenicillin N s 38.3 1.2E+02 0.0025 29.3 7.0 106 125-257 149-273 (322)
69 COG5285 Protein involved in bi 38.0 90 0.0019 29.8 6.1 92 155-259 134-233 (299)
70 KOG1971 Lysyl hydroxylase [Pos 37.9 24 0.00051 35.2 2.3 70 171-257 280-357 (415)
71 PF12273 RCR: Chitin synthesis 37.3 11 0.00024 31.1 0.0 18 10-27 4-21 (130)
72 KOG4459 Membrane-associated pr 35.7 8 0.00017 38.9 -1.3 76 171-261 364-439 (471)
73 PHA03030 hypothetical protein; 35.0 16 0.00035 29.3 0.6 23 5-27 2-24 (122)
74 PF11403 Yeast_MT: Yeast metal 30.9 22 0.00047 22.8 0.5 8 304-311 18-25 (40)
75 PF11395 DUF2873: Protein of u 28.2 57 0.0012 21.4 2.2 13 7-19 16-28 (43)
76 KOG1231 Proteins containing th 28.1 2E+02 0.0044 29.3 7.0 80 1-89 1-86 (505)
77 TIGR00568 alkb DNA alkylation 26.7 1E+02 0.0022 26.9 4.2 40 121-160 74-114 (169)
78 PRK09553 tauD taurine dioxygen 25.2 51 0.0011 30.7 2.2 35 155-195 95-129 (277)
79 PF12751 Vac7: Vacuolar segreg 22.9 1.2E+02 0.0027 29.9 4.4 30 6-35 305-334 (387)
No 1
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=100.00 E-value=1.5e-81 Score=592.49 Aligned_cols=264 Identities=40% Similarity=0.821 Sum_probs=243.8
Q ss_pred CCcccCCceeEEeecCCcEEEEcCCCCHHHHHHHHHHhccCCccceeeCCCCCcccccccccccccccC-CccHHHHHHH
Q 021375 49 NSKRVDPSRVTQISWRPRVFLYRGLLSNEECDHLISLGHGAEKKYKRTGEDPENVSKNKQNSSFRTELN-IEDDIVARIE 127 (313)
Q Consensus 49 ~~~~~~P~kve~ls~~P~i~v~~~fLs~~EC~~Li~~a~~~l~~s~v~~~~~g~~~~~~~RtS~~~~l~-~~d~vv~~i~ 127 (313)
.+..++|.|+|+||++|+||+|+||||++||++||++|++++++|+++++.+|++..+++|||+++|+. .+++++++|+
T Consensus 38 ~~~~~~~~kve~lS~~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~s~~RTS~~~~l~~~~dpvv~~I~ 117 (310)
T PLN00052 38 AAPPFNASRVKAVSWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSSGMFLDKRQDPVVSRIE 117 (310)
T ss_pred CCCCcCCceEEEecCCCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCccccCCCEEecceeecCCCCHHHHHHH
Confidence 344679999999999999999999999999999999999999999999887777778899999999998 6789999999
Q ss_pred HHHHhhcCCCCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCc-----ccccc
Q 021375 128 EKILTWTFLPKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSE-----EKDKM 201 (313)
Q Consensus 128 ~Ri~~~tglp~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~-----~~~~~ 201 (313)
+||++++++|.++.|+|||+||++ |+|++|+|++.+..+...+++|++|+|+|||||++||||+||.++ +++..
T Consensus 118 ~Ria~~t~lp~~~~E~lQVlrY~~Gq~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~~~~~~~~~~~~ 197 (310)
T PLN00052 118 ERIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEGWENQPKDDT 197 (310)
T ss_pred HHHHHHhCCCcccCcceEEEecCCCCCCCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCcccccccccccc
Confidence 999999999999999999999999 999999999986544456899999999999999999999999984 34567
Q ss_pred cccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccceeeeeEEEEEeccccccccccCCCCCCCcCCCCCch
Q 021375 202 WSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAANAEEVLIGSDSNECTDEDDNCP 281 (313)
Q Consensus 202 ~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~~~~~~~~~~~~~~C~d~~~~C~ 281 (313)
|++|++.+++|+|+||+||||+|+++||..|++++|+||||++|+||+||+|||..++...... ...++.|.|++++|+
T Consensus 198 ~s~c~~~gl~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~~~~~~~~~-~~~~~~C~d~~~~C~ 276 (310)
T PLN00052 198 FSECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIRSYEHPPVV-PKDTEGCADKSAHCA 276 (310)
T ss_pred hhhhhcCCeEeccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEEeeecccccCCCcC-CccCCCCcCCcccCh
Confidence 8999999999999999999999999999999999999999999999999999999999753221 134679999999999
Q ss_pred hHhhcCccccCccccccCccCcchhhhhcCCC
Q 021375 282 HWAAVGECQRNPVYMLGSPDYYGTCRKSCHAC 313 (313)
Q Consensus 282 ~Wa~~geC~~n~~~M~g~~~~~~~C~~sC~~C 313 (313)
.||+.|||++||.||+|+++++++|+||||.|
T Consensus 277 ~Wa~~GeC~~Np~yM~g~~~~~~~C~~SC~~C 308 (310)
T PLN00052 277 EWAAAGECEKNPVYMVGAEGAPGNCRKSCGVC 308 (310)
T ss_pred hHhhCCccccChHhhcCCCCCCChhhcccccc
Confidence 99999999999999999999999999999999
No 2
>KOG1591 consensus Prolyl 4-hydroxylase alpha subunit [Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-55 Score=405.97 Aligned_cols=199 Identities=36% Similarity=0.613 Sum_probs=184.5
Q ss_pred CCcccCCceeEEeecCCcEEEEcCCCCHHHHHHHHHHhccCCccceee-CCCCCcccccccccccccccC-CccHHHHHH
Q 021375 49 NSKRVDPSRVTQISWRPRVFLYRGLLSNEECDHLISLGHGAEKKYKRT-GEDPENVSKNKQNSSFRTELN-IEDDIVARI 126 (313)
Q Consensus 49 ~~~~~~P~kve~ls~~P~i~v~~~fLs~~EC~~Li~~a~~~l~~s~v~-~~~~g~~~~~~~RtS~~~~l~-~~d~vv~~i 126 (313)
+++.++|+|+|+|||+|+|++||||||++||++|+++|++++++++|. +..+|....+.+|+|+++|+. +.++++++|
T Consensus 81 ~~~~~ap~k~E~lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~stv~~~~~~~~~~~~~~R~S~~t~l~~~~~~~~~~i 160 (289)
T KOG1591|consen 81 PFLRLAPVKLEELSWDPRVVLYHDFLSDEECDHLISLAKPKLERSTVVADKGTGHSTTSAVRTSSGTFLPDGASPVVSRI 160 (289)
T ss_pred cceeecchhhhhcccCCceEeehhcCCHHHHHHHHHhhhhhhhceeeeccCCcccccceeeEecceeEecCCCCHHHHHH
Confidence 789999999999999999999999999999999999999999999994 455566666778999999999 589999999
Q ss_pred HHHHHhhcCCCCCCCCcceEeeecC-CCccccccCCCC---C-CCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccc
Q 021375 127 EEKILTWTFLPKENSKPVHVMRYGL-DEAKENLDYFGN---K-SALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKM 201 (313)
Q Consensus 127 ~~Ri~~~tglp~~~~E~lqv~rY~~-~~y~~H~D~~~~---~-~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~ 201 (313)
++||+++|++|.+++|.|||++|++ |+|.+|+|++.+ . .+...+++|++|+|+||+||++||+|+||.+
T Consensus 161 ~~ri~~~T~l~~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~l~yls~v~~GG~TvFP~~------ 234 (289)
T KOG1591|consen 161 EQRIADLTGLPVENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNGLNGGNRIATVLMYLSDVEQGGETVFPNL------ 234 (289)
T ss_pred HHHHHhccCCCcccCccceEEEecCCccccccccccccccchhhhhcccCCcceeEEEEecccCCCCcccCCCC------
Confidence 9999999999999999999999999 999999999952 2 1234689999999999999999999999998
Q ss_pred cccccCcCe--eEecccceEEEEeccCCCCCCCCCCcccccccccceeeeeEEEEEecccc
Q 021375 202 WSDCAKTSN--VLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAAN 260 (313)
Q Consensus 202 ~~~c~~~~~--~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~~ 260 (313)
+. +|+|+||+||+|||+++||..|++|+|+||||+.|+||++|+|||++.+.
T Consensus 235 -------~~~~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~~wi~~~~~~ 288 (289)
T KOG1591|consen 235 -------GMKPAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIATKWIHEKNQE 288 (289)
T ss_pred -------CCcccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeeeeeeeecccc
Confidence 45 99999999999999999999999999999999999999999999998774
No 3
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=100.00 E-value=1.3e-36 Score=265.66 Aligned_cols=172 Identities=26% Similarity=0.460 Sum_probs=150.3
Q ss_pred CcEEEEcCCCCHHHHHHHHHHhccCCccceeeCCCCCcccccccccccccccCC-c-cHHHHHHHHHHHhhcCCC---CC
Q 021375 65 PRVFLYRGLLSNEECDHLISLGHGAEKKYKRTGEDPENVSKNKQNSSFRTELNI-E-DDIVARIEEKILTWTFLP---KE 139 (313)
Q Consensus 65 P~i~v~~~fLs~~EC~~Li~~a~~~l~~s~v~~~~~g~~~~~~~RtS~~~~l~~-~-d~vv~~i~~Ri~~~tglp---~~ 139 (313)
|.|++++||||++||++||+++++.+.++.+..+..+....+++|+|..+|+.. + ++++++|.+||+++++++ ..
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 80 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGWRGEVTRGDTNPNHDSKYRQSNGTWLELLKGDLVIERIRQRLADFLGLLRGLPL 80 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcccceeecCCCCccccCCCEeecceecCCCCCCHHHHHHHHHHHHHHCCCchhhc
Confidence 789999999999999999999999888888876543333567899999999983 2 799999999999999998 78
Q ss_pred CCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecccce
Q 021375 140 NSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGN 218 (313)
Q Consensus 140 ~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~ 218 (313)
..|++|+++|++ ++|.+|+|...... .++|.+|+++||||+++||+|.||.... .....|+|++|+
T Consensus 81 ~~~~~~~~~Y~~g~~~~~H~D~~~~~~----~~~r~~T~~~yLn~~~~GG~~~f~~~~~---------~~~~~v~P~~G~ 147 (178)
T smart00702 81 SAEDAQVARYGPGGHYGPHVDNFEDDE----NGDRIATFLLYLNDVEEGGELVFPGLGL---------MVCATVKPKKGD 147 (178)
T ss_pred cCcceEEEEECCCCcccCcCCCCCCCC----CCCeEEEEEEEeccCCcCceEEecCCCC---------ccceEEeCCCCc
Confidence 999999999999 99999999976532 2689999999999999999999998620 124599999999
Q ss_pred EEEEeccCCCCCCCCCCcccccccccceeeeeEEEEE
Q 021375 219 AILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQ 255 (313)
Q Consensus 219 AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~ 255 (313)
||+|++.+ +.++|++|||++|+||++++|+|
T Consensus 148 ~v~f~~~~------~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 148 LLFFPSGR------GRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred EEEEeCCC------CCccccCCcceeCCEEEEEEEEC
Confidence 99999853 37999999999999999999996
No 4
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=99.93 E-value=2.4e-25 Score=201.91 Aligned_cols=167 Identities=18% Similarity=0.196 Sum_probs=125.3
Q ss_pred EEEEcCCCCHHHHHHHHHHhcc-CCccceeeCCCCCcccccccccccccccCCccHHHHHHHHHHHhhc---------CC
Q 021375 67 VFLYRGLLSNEECDHLISLGHG-AEKKYKRTGEDPENVSKNKQNSSFRTELNIEDDIVARIEEKILTWT---------FL 136 (313)
Q Consensus 67 i~v~~~fLs~~EC~~Li~~a~~-~l~~s~v~~~~~g~~~~~~~RtS~~~~l~~~d~vv~~i~~Ri~~~t---------gl 136 (313)
|++++|+||++||+++++..+. .+....+.. | ....++|++...- .++++.+.|.+||.+.+ .+
T Consensus 2 i~~I~~vLs~eec~~~~~~le~~~~~dg~~ta---G-~~~~~vKnN~ql~--~d~~~a~~l~~~i~~~L~~~~l~~sa~l 75 (226)
T PRK05467 2 LLHIPDVLSPEEVAQIRELLDAAEWVDGRVTA---G-AQAAQVKNNQQLP--EDSPLARELGNLILDALTRNPLFFSAAL 75 (226)
T ss_pred eeeecccCCHHHHHHHHHHHHhcCCccCCcCc---C-ccchhcccccccC--CCCHHHHHHHHHHHHHHhcCchhhhhcc
Confidence 5789999999999999998774 344333221 1 1245677765543 35677777888777643 33
Q ss_pred CCCCCCcceEeeecC-CCccccccCCCCCCC-CCCCCCeeEEEEeeecCCC--CCcccccCCCcccccccccccCcCeeE
Q 021375 137 PKENSKPVHVMRYGL-DEAKENLDYFGNKSA-LGLSQPLMAAVVLYLSNVT--QGGELLFPNSEEKDKMWSDCAKTSNVL 212 (313)
Q Consensus 137 p~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~-~~~~~~R~~TvLiYLnDv~--~GGeT~FP~~~~~~~~~~~c~~~~~~V 212 (313)
|.. ..++++.||.+ ++|++|+|....... ...+.+|.+|+++||||++ +||||+|+... ....|
T Consensus 76 p~~-i~~~~f~rY~~G~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~~-----------g~~~V 143 (226)
T PRK05467 76 PRK-IHPPLFNRYEGGMSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDTY-----------GEHRV 143 (226)
T ss_pred ccc-cccceEEEECCCCccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecCC-----------CcEEE
Confidence 322 35789999999 999999999764321 1112356899999999875 79999998642 25789
Q ss_pred ecccceEEEEeccCCCCCCCCCCcccccccccceeeeeEEEEEecccc
Q 021375 213 RPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAAN 260 (313)
Q Consensus 213 ~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~~ 260 (313)
+|++|++|+|++ .++|+++||++|+||+++.|++..-.+
T Consensus 144 kp~aG~~vlfps---------~~lH~v~pVt~G~R~~~~~Wi~S~v~~ 182 (226)
T PRK05467 144 KLPAGDLVLYPS---------TSLHRVTPVTRGVRVASFFWIQSLVRD 182 (226)
T ss_pred ecCCCeEEEECC---------CCceeeeeccCccEEEEEecHHHHcCC
Confidence 999999999998 699999999999999999999876443
No 5
>PHA02869 C4L/C10L-like gene family protein; Provisional
Probab=99.64 E-value=6.3e-16 Score=148.07 Aligned_cols=134 Identities=15% Similarity=0.141 Sum_probs=106.1
Q ss_pred CccceeeCCCCCc-ccccccccccccccCCccHHHHHHHHHHHhh-----cCC--CCCCCCcceEeeecC-CCccccccC
Q 021375 90 EKKYKRTGEDPEN-VSKNKQNSSFRTELNIEDDIVARIEEKILTW-----TFL--PKENSKPVHVMRYGL-DEAKENLDY 160 (313)
Q Consensus 90 l~~s~v~~~~~g~-~~~~~~RtS~~~~l~~~d~vv~~i~~Ri~~~-----tgl--p~~~~E~lqv~rY~~-~~y~~H~D~ 160 (313)
+..|.+.+..+|. ......|+|++..+. ..+.+.|.+||+.+ -+. .+...|.++++||.+ |+|++|.|+
T Consensus 45 ~~~s~i~~~~~g~e~~~~~~~ksKqii~e--~~La~~L~erlr~lLp~~lk~~v~~V~lnerirfyrY~kGq~F~~H~Dg 122 (418)
T PHA02869 45 CEDSKIFFPEKRTELLSIKDRKSKQIVFE--NSLNDDLLKKLHALIYDELSTVVDSVTVENTVTLIMYEKGDYFARHRDF 122 (418)
T ss_pred cccceeeccccCceeEeeccccceeEEec--hHHHHHHHHHHHHhhhHHhhCccceEEEcceEEEEEECCCCcccccccC
Confidence 4678887766663 345667999988764 56677777777754 233 346789999999999 999999998
Q ss_pred CCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecccceEEEEeccCCCCCCCCCCccccc
Q 021375 161 FGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRC 240 (313)
Q Consensus 161 ~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gc 240 (313)
.... .+....+|+|+|||++++||||.|+.- ....|+|++| |+|.. ...|+|.
T Consensus 123 ~~~r----s~e~s~~tLLLYLNd~~~GGET~f~~~------------~~~sI~pksg--LLFdh---------~l~Heg~ 175 (418)
T PHA02869 123 STVF----SKNIICVHLLLYLEQPETGGETVIYID------------NNTSVKLKTD--HLFDK---------TIEHESI 175 (418)
T ss_pred ceec----CCCEEEEEEEEEEeccCCCCceEEEeC------------CCceEecCCC--eEecc---------ccccCCc
Confidence 6543 245678999999999999999999873 2577999999 88854 7999999
Q ss_pred ccccceeeeeEE
Q 021375 241 PVLEGEMWSAVK 252 (313)
Q Consensus 241 PV~~G~K~iat~ 252 (313)
+|.+|.||||..
T Consensus 176 ~V~sG~KyVart 187 (418)
T PHA02869 176 TVESGRKCVALF 187 (418)
T ss_pred EeecCeEEEEEE
Confidence 999999999843
No 6
>PHA02813 hypothetical protein; Provisional
Probab=99.63 E-value=1.2e-15 Score=144.34 Aligned_cols=150 Identities=17% Similarity=0.160 Sum_probs=109.0
Q ss_pred HHHHHHHHhccCCccceeeCCCCC-cccccccccccccccCCccHHHHHHHHHHHhh-----cCCC----CCCCCcceEe
Q 021375 78 ECDHLISLGHGAEKKYKRTGEDPE-NVSKNKQNSSFRTELNIEDDIVARIEEKILTW-----TFLP----KENSKPVHVM 147 (313)
Q Consensus 78 EC~~Li~~a~~~l~~s~v~~~~~g-~~~~~~~RtS~~~~l~~~d~vv~~i~~Ri~~~-----tglp----~~~~E~lqv~ 147 (313)
+.-.+|+.-.-.+..|.+.+..+| +....++|+++++.++.. +.|.+||+.+ .|.+ +...|.++++
T Consensus 24 ~l~~~i~~~d~~~~~s~i~~~~~~ge~l~~~iRnNkrviid~~----~~L~erIr~~Lp~~l~~~~lv~~V~vnerirfy 99 (354)
T PHA02813 24 IIMDMIKYKDIIWEESKVFDHEKGGEVINTNERQCKQYIIRGL----DDIFKVIRKKLLLSFEFPQKISDIILDNTITLI 99 (354)
T ss_pred HHHHHHhccccCccccceeccccCceEEccccccceEEEEcCH----HHHHHHHHHhhHHHhcCCccceeEEEcceEEEE
Confidence 344444433335677888775555 445778999999888632 5555555543 2333 3568999999
Q ss_pred eecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecccceEEEEeccC
Q 021375 148 RYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVH 226 (313)
Q Consensus 148 rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~ 226 (313)
||.+ |+|++|.|+....+ ...+.+|+|+|||++++||||.|...+ .-.|. .|++|+|..
T Consensus 100 rY~kGq~F~~H~Dg~~~r~----k~~s~~tLLLYLN~~~~GGeT~f~~~~------------~tsI~--~g~dlLFdh-- 159 (354)
T PHA02813 100 KYEKGDFFNNHRDFIHFKS----KNCYCYHLVLYLNNTSKGGNTNIHIKD------------NTIFS--TKNDVLFDK-- 159 (354)
T ss_pred EECCCcccCcccCCceeec----CCceEEEEEEEEeccCCCCceEEEcCC------------CceEe--ecceEEEec--
Confidence 9999 99999999865331 123899999999999999999998742 22466 999999965
Q ss_pred CCCCCCCCCcccccccccceeeee--EEEEEecc
Q 021375 227 PNAAPDESSSHTRCPVLEGEMWSA--VKFFQVKA 258 (313)
Q Consensus 227 ~~g~~D~~slH~gcPV~~G~K~ia--t~Wi~~~~ 258 (313)
...|+|.||.+|.||+| +.-+..++
T Consensus 160 -------~l~Heg~~V~sG~KyVa~~~V~l~~k~ 186 (354)
T PHA02813 160 -------TLNHSSDIITDGEKNIALINVVIKYNS 186 (354)
T ss_pred -------ccccCCcEeccCeEEEEEEEEEEEecc
Confidence 89999999999999987 44444444
No 7
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=99.54 E-value=1.6e-14 Score=114.30 Aligned_cols=95 Identities=24% Similarity=0.354 Sum_probs=69.0
Q ss_pred ceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCC---CCcccccCCCcccccccccccCcCeeEecccceE
Q 021375 144 VHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVT---QGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNA 219 (313)
Q Consensus 144 lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~---~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~A 219 (313)
+|+.+|.+ ++|+||.|... ...+.+|+|+|||+++ +||+|.|......+...... ....++|+.|++
T Consensus 1 ~~~~~y~~G~~~~~H~D~~~-------~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~--~~~~~~p~~g~~ 71 (100)
T PF13640_consen 1 MQLNRYPPGGFFGPHTDNSY-------DPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREV--EDFDIVPKPGRL 71 (100)
T ss_dssp -EEEEEETTEEEEEEESSSC-------CCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEE--GGGSEE-BTTEE
T ss_pred CEEEEECcCCEEeeeECCCC-------CCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEE--EeccccCCCCEE
Confidence 58999999 99999999754 3679999999999887 89999997631000000000 012234999999
Q ss_pred EEEeccCCCCCCCCCCccccccc-ccceeeeeEEEEE
Q 021375 220 ILFFTVHPNAAPDESSSHTRCPV-LEGEMWSAVKFFQ 255 (313)
Q Consensus 220 llF~n~~~~g~~D~~slH~gcPV-~~G~K~iat~Wi~ 255 (313)
|+|.+ ..++|++.|| ..|.|++++.|+|
T Consensus 72 v~F~~--------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 72 VIFPS--------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp EEEES--------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred EEEeC--------CCCeecCcccCCCCCEEEEEEEEC
Confidence 99987 3799999999 9999999999996
No 8
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=99.19 E-value=1.2e-10 Score=101.61 Aligned_cols=164 Identities=18% Similarity=0.219 Sum_probs=105.7
Q ss_pred EEEEcCCCCHHHHHHHHHHhcc-CCccceeeCCCCCcccccccccccccccCCccHHHHHHHHHHHhh-------c--CC
Q 021375 67 VFLYRGLLSNEECDHLISLGHG-AEKKYKRTGEDPENVSKNKQNSSFRTELNIEDDIVARIEEKILTW-------T--FL 136 (313)
Q Consensus 67 i~v~~~fLs~~EC~~Li~~a~~-~l~~s~v~~~~~g~~~~~~~RtS~~~~l~~~d~vv~~i~~Ri~~~-------t--gl 136 (313)
.+-++.+||+++|.+|.+..+. .+....+..+..+ ...|.....- .+++..+.|..-|.+. + .+
T Consensus 4 ~lhIp~VLs~a~va~iRa~l~~A~w~dGrat~g~q~----a~vk~n~qlp--~~s~l~~~vg~~il~al~~~plff~aAL 77 (229)
T COG3128 4 MLHIPEVLSEAQVARIRAALEQAEWVDGRATQGPQG----AQVKNNLQLP--QDSALARELGNEILQALTAHPLFFAAAL 77 (229)
T ss_pred EEechhhCCHHHHHHHHHHHhhccccccccccCcch----hhhhccccCC--cccHHHHHHHHHHHHHHHhchhHHHhhc
Confidence 4457899999999999776442 2211111111112 2233332222 2234444444333321 1 23
Q ss_pred CCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCee---EEEEeeecCCC--CCcccccCCCcccccccccccCcCe
Q 021375 137 PKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLM---AAVVLYLSNVT--QGGELLFPNSEEKDKMWSDCAKTSN 210 (313)
Q Consensus 137 p~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~---~TvLiYLnDv~--~GGeT~FP~~~~~~~~~~~c~~~~~ 210 (313)
| ...++.++.+|.. ..|.+|+|+........ .+.|+ ++.-++|+|++ +|||.+--..- ...
T Consensus 78 p-~t~~~P~Fn~Y~eg~~f~fHvDgavr~~hp~-~~~~lrtdls~tlfl~DPedYdGGeLVv~dtY-----------g~h 144 (229)
T COG3128 78 P-RTCLPPLFNRYQEGDFFGFHVDGAVRSIHPG-SGFRLRTDLSCTLFLSDPEDYDGGELVVNDTY-----------GNH 144 (229)
T ss_pred c-cccCCchhhhccCCCcccccccCcccccCCC-CCceeEeeeeeeeecCCccccCCceEEEeccc-----------cce
Confidence 3 2456789999999 99999999875432221 23354 45557899987 59999874431 367
Q ss_pred eEecccceEEEEeccCCCCCCCCCCcccccccccceeeeeEEEEEecc
Q 021375 211 VLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 211 ~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~ 258 (313)
.|+=..|++|+|++ .|+|...||++|+++..-.|+...-
T Consensus 145 ~VklPAGdLVlypS---------tSlH~VtPVTRg~R~asffW~qsli 183 (229)
T COG3128 145 RVKLPAGDLVLYPS---------TSLHEVTPVTRGERFASFFWIQSLI 183 (229)
T ss_pred EEeccCCCEEEccc---------ccceeccccccCceEEEeeehHHHh
Confidence 88888899999998 7999999999999999999987643
No 9
>smart00254 ShKT ShK toxin domain. ShK toxin domain
Probab=99.09 E-value=2.8e-11 Score=77.46 Aligned_cols=33 Identities=45% Similarity=1.164 Sum_probs=31.9
Q ss_pred CcCCCCCchhHhhcCccccCccccccCccCcchhhhhcCCC
Q 021375 273 CTDEDDNCPHWAAVGECQRNPVYMLGSPDYYGTCRKSCHAC 313 (313)
Q Consensus 273 C~d~~~~C~~Wa~~geC~~n~~~M~g~~~~~~~C~~sC~~C 313 (313)
|.|.+..|+.|| .|+| +||.||. .+|+||||.|
T Consensus 1 C~D~~~~C~~wa-~~~C-~~~~~~~------~~C~ktCg~C 33 (33)
T smart00254 1 CVDRHPDCAAWA-KGFC-TNPFYMK------SNCPKTCGFC 33 (33)
T ss_pred CCCCcccCcchh-hCcC-CChhHHH------hhhhhhcccC
Confidence 889999999999 9999 8999999 9999999998
No 10
>PF01549 ShK: ShK domain-like; InterPro: IPR003582 The ShK toxin domain is found in metridin, a toxin from Metridium senile (brown sea anemone) and in ShK, a structurally defined polypeptide from the sea anemone Stoichactis helianthus (Stichodactyla helianthus) (Caribbean sea anemone). ShK is a powerful inhibitor of T lymphocyte voltage-gated potassium channels, in particular Kv1.3 []. It has been proposed that structural analogues may have use as an immunosuppressants for the prevention of graft rejection and for the treatment of autoimmune diseases []. The ShK toxin domain, is also found in one or more copies as a C-terminal domain in the metallopeptidases of Caenorhabditis elegans. The metallopeptidases belonging to MEROPS peptidase families: M10A, M12A and M14A. The majority belonging to M12A, the astacin/adamalysin family of metallopeptidases.; PDB: 1BGK_A 2K72_A.
Probab=98.75 E-value=1.2e-09 Score=71.57 Aligned_cols=36 Identities=36% Similarity=0.898 Sum_probs=29.3
Q ss_pred CCcCCCCCchhHhhcCccccCc--cccccCccCcchhhhhcCCC
Q 021375 272 ECTDEDDNCPHWAAVGECQRNP--VYMLGSPDYYGTCRKSCHAC 313 (313)
Q Consensus 272 ~C~d~~~~C~~Wa~~geC~~n~--~~M~g~~~~~~~C~~sC~~C 313 (313)
.|.|.++.|+.|+..|.|++++ .||. .+||+|||.|
T Consensus 1 ~C~D~~~~C~~~~~~g~C~~~~~~~~m~------~~C~~tCg~C 38 (38)
T PF01549_consen 1 NCRDKNPNCATWANNGFCTNPFYQDFMR------KNCPKTCGFC 38 (38)
T ss_dssp ---S-HCHHHHHHCCTTTTTSH--HHHH------CCTTTTTT--
T ss_pred CCCCchhhhhhhhhhhhhcccccchhhh------chhcccCcCC
Confidence 4899999999999999999998 9999 9999999998
No 11
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=98.34 E-value=3.8e-07 Score=71.71 Aligned_cols=89 Identities=18% Similarity=0.186 Sum_probs=54.9
Q ss_pred CcceEeeec---C-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecccc
Q 021375 142 KPVHVMRYG---L-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKG 217 (313)
Q Consensus 142 E~lqv~rY~---~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG 217 (313)
+.+++.+|. . ..+.+|.|.. ++++|+|++ +++|++.|.... ..+.|.|..+
T Consensus 2 ~~~~~~~Y~~~~~~~~~~~H~D~~----------~~~~Til~~----~~~~gL~~~~~~-----------~~~~v~~~~~ 56 (98)
T PF03171_consen 2 SQLRLNRYPPPENGVGIGPHTDDE----------DGLLTILFQ----DEVGGLQVRDDG-----------EWVDVPPPPG 56 (98)
T ss_dssp -EEEEEEE-SCCGCEEEEEEEES------------SSEEEEEE----TSTS-EEEEETT-----------EEEE----TT
T ss_pred CEEEEEECCCcccCCceeCCCcCC----------CCeEEEEec----ccchheeccccc-----------cccCccCccc
Confidence 468999999 6 8899999974 478999999 677888887642 2456666665
Q ss_pred eEEEEe-ccC--CCCCCCCCCcccccccccceeeeeEEEEE
Q 021375 218 NAILFF-TVH--PNAAPDESSSHTRCPVLEGEMWSAVKFFQ 255 (313)
Q Consensus 218 ~AllF~-n~~--~~g~~D~~slH~gcPV~~G~K~iat~Wi~ 255 (313)
..++.. +.. -.+...+...|+++|+.+|.|++++.|++
T Consensus 57 ~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~ 97 (98)
T PF03171_consen 57 GFIVNFGDALEILTNGRYPATLHRVVPPTEGERYSLTFFLR 97 (98)
T ss_dssp CEEEEEBHHHHHHTTTSS----EEEE--STS-EEEEEEEEE
T ss_pred eeeeeceeeeecccCCccCCceeeeEcCCCCCEEEEEEEEC
Confidence 555543 311 13445678999999999999999999986
No 12
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily
Probab=98.27 E-value=9.3e-07 Score=66.02 Aligned_cols=51 Identities=24% Similarity=0.304 Sum_probs=42.3
Q ss_pred CCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeec----CCCCCcccccCCC
Q 021375 141 SKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLS----NVTQGGELLFPNS 195 (313)
Q Consensus 141 ~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLn----Dv~~GGeT~FP~~ 195 (313)
.+.++..+|.. ++|++|+|..... .+.+|.+|+||||| +...||++.|+.-
T Consensus 10 ~~~~~~~~~~~g~~~~~H~D~~~~~----~~~~r~~t~llYLn~~w~~d~~Gg~~~f~~~ 65 (70)
T PF13661_consen 10 RPNFRFYRYRRGDFFGWHVDADPSS----SGKRRFLTLLLYLNEDWDEDFGGGELFFDDD 65 (70)
T ss_pred CcceeEEEcCCCCEeeeeEcCCccc----cccceeEEEEEEecccccCccCCcEEEEeCC
Confidence 46789999999 9999999987643 26889999999999 4557888888764
No 13
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=98.22 E-value=2.4e-05 Score=70.71 Aligned_cols=168 Identities=14% Similarity=0.144 Sum_probs=107.6
Q ss_pred cEEEEcCCCCHHHHHHHHHHhc----c-CCccceeeCCCCCcccccccccccccccCCccHHHHHHH-------HHHHhh
Q 021375 66 RVFLYRGLLSNEECDHLISLGH----G-AEKKYKRTGEDPENVSKNKQNSSFRTELNIEDDIVARIE-------EKILTW 133 (313)
Q Consensus 66 ~i~v~~~fLs~~EC~~Li~~a~----~-~l~~s~v~~~~~g~~~~~~~RtS~~~~l~~~d~vv~~i~-------~Ri~~~ 133 (313)
.+.+++|||-.+-=..+.+..+ . .+....++..+. ....++|..+.+|+.+.++-...|. .-+...
T Consensus 54 g~~vvd~flg~~~g~~v~~ev~~l~~~G~f~dgql~~~~~--~~~k~iRgd~i~wi~G~e~gc~~i~~L~s~~d~~i~h~ 131 (280)
T KOG3710|consen 54 GICVVDNFLGSETGKFILKEVEALYETGAFRDGQLVSPDA--FHSKDIRGDKITWVGGNEPGCETIMLLPSPIDSVILHC 131 (280)
T ss_pred ceEEEechhhHHHHHHHHHHHHHHHhccCccCceeccCcC--CcchhhccCCceEecCCCCCccceeeecccchhhhhhh
Confidence 4668999998876555444333 2 234333333322 2234899999999983322111111 111111
Q ss_pred ---cCCCCCCCCcceEeeecC--CCccccccCCCCCCCCCCCCCeeEEEEeeecC---CC-CCcc-cccCCCcccccccc
Q 021375 134 ---TFLPKENSKPVHVMRYGL--DEAKENLDYFGNKSALGLSQPLMAAVVLYLSN---VT-QGGE-LLFPNSEEKDKMWS 203 (313)
Q Consensus 134 ---tglp~~~~E~lqv~rY~~--~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnD---v~-~GGe-T~FP~~~~~~~~~~ 203 (313)
.+--.-.--.--|+-|.- -.|-.|+|.-. +.-|..|.+.|||. +. .||. -.||...+
T Consensus 132 ~~r~~~~~~gRtkAMVAcYPGNGtgYVrHVDNP~-------gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~~------ 198 (280)
T KOG3710|consen 132 NGRLGSYIIGRTKAMVACYPGNGTGYVRHVDNPH-------GDGRCITCIYYLNQNWDVKVHGGILRIFPEGST------ 198 (280)
T ss_pred ccccccccccceeEEEEEecCCCceeeEeccCCC-------CCceEEEEEEEcccCcceeeccceeEeccCCCC------
Confidence 111111123456888977 68999999643 56799999999994 43 3544 47998631
Q ss_pred cccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccceeeeeEEEEEecccc
Q 021375 204 DCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAAN 260 (313)
Q Consensus 204 ~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~~ 260 (313)
.-..|.|+-+..||||+ |.+-.|+..|+.. +||.+|.|.-...-+
T Consensus 199 ----~~adieP~fdrLlffwS-------drrnPhev~Pa~~-tryaitvwyfda~er 243 (280)
T KOG3710|consen 199 ----TFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDAKER 243 (280)
T ss_pred ----cccccCcCCCeEEEEEe-------cCCCccccccccc-cceEEEEEEeccccc
Confidence 23569999999999999 6788999999986 799999998776544
No 14
>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae.
Probab=98.20 E-value=5.8e-06 Score=78.71 Aligned_cols=120 Identities=22% Similarity=0.291 Sum_probs=86.1
Q ss_pred ccccccccccC--CccHHHHHHHHHHHhhc-C-C-CCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEee
Q 021375 107 KQNSSFRTELN--IEDDIVARIEEKILTWT-F-L-PKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLY 180 (313)
Q Consensus 107 ~~RtS~~~~l~--~~d~vv~~i~~Ri~~~t-g-l-p~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiY 180 (313)
..|.|+...+. ..+++.++|++.+..-+ . + .+.-.+.+.+++|+. ++|+.|.|..... .....-.++++|
T Consensus 39 ~~r~sk~iv~~~~~~~dI~~~ik~~l~~~lk~~v~~V~V~n~iTfikY~kGd~f~~~~d~~~~~----~~n~~~y~LvLy 114 (339)
T PF03336_consen 39 EFRKSKQIVIEDSLNDDIFSKIKNLLYDELKNVVEDVIVDNTITFIKYEKGDFFDNHRDFIKRD----SKNCLEYHLVLY 114 (339)
T ss_pred cccccceEEEeccchHHHHHHHHHHHHHHhhcceeEEEEcceEEEEEEccCcchhhhcccceec----cCCceEEEEEEE
Confidence 37788776665 45678888877766432 2 1 234567899999999 9999999944322 345678999999
Q ss_pred ecCCCCCcccccCCCcccccccccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccceeeeeE
Q 021375 181 LSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAV 251 (313)
Q Consensus 181 LnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat 251 (313)
|+.+++||+|.+.--. + ..-.+.+ ++-++| |....|.+.+|.+|.|.+|.
T Consensus 115 L~~~~~GGktkiyi~~--------~--~~tvI~~--~~DvLF---------dKsl~h~s~~V~~G~K~VAl 164 (339)
T PF03336_consen 115 LNNPENGGKTKIYIDP--------N--DNTVIST--SEDVLF---------DKSLNHESIIVEEGRKIVAL 164 (339)
T ss_pred EeccCCCceEEEEECC--------C--Cceeeec--cccEEE---------eccccccceEeccCeEEEEE
Confidence 9999999999865310 0 1212433 667777 45799999999999999963
No 15
>PHA02866 Hypothetical protein; Provisional
Probab=97.97 E-value=2.5e-05 Score=72.97 Aligned_cols=131 Identities=13% Similarity=0.064 Sum_probs=89.4
Q ss_pred CccceeeCCCCC-cccccccccccccccCCccHHHHHHHHHHHhhcCCC---CCCCCcceEeeecC-CCccccccCCCCC
Q 021375 90 EKKYKRTGEDPE-NVSKNKQNSSFRTELNIEDDIVARIEEKILTWTFLP---KENSKPVHVMRYGL-DEAKENLDYFGNK 164 (313)
Q Consensus 90 l~~s~v~~~~~g-~~~~~~~RtS~~~~l~~~d~vv~~i~~Ri~~~tglp---~~~~E~lqv~rY~~-~~y~~H~D~~~~~ 164 (313)
+.+|.+.+...| +-.....|.|.++ +++..+++ |+.++ .+| +-..+.+.+++|.. .+|.-|.|....+
T Consensus 32 w~~s~i~~~~~~i~~~~~~~~k~k~~-----~~v~~~v~-~~~~~-~~~~~dv~v~~~~t~vk~~kg~~fdn~~~~~~~~ 104 (333)
T PHA02866 32 WEDSDILRHRQFIPCEILVLEKSERT-----KQVFGAVK-RVLAS-SLTDYDVYVCEHLTIVKCFKGVGFDNRFSILTED 104 (333)
T ss_pred cchhhhhhhccCCceeeeehhhhhhh-----HHHHHHHH-HHHhc-cCCCccEEEeeeEEEEEEecccccccceeEEEec
Confidence 778888775544 2334556776654 57777776 44433 222 23457899999999 9999998875533
Q ss_pred CCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecccceEEEEeccCCCCCCCCCCccccccccc
Q 021375 165 SALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLE 244 (313)
Q Consensus 165 ~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~ 244 (313)
....+-.++|+||+.+++||+|.++-- +-.+--.+-+ ++| |....|...-|.+
T Consensus 105 ----~~~~~~Y~LvLyL~~p~~GGkt~iyv~-------------~~t~i~~~~D-vLF---------DKsl~h~S~~V~~ 157 (333)
T PHA02866 105 ----RHRGREYTLVLHLSSPKNGGKTDVCVG-------------DKTVISTADD-FLL---------EKRSEQLSNVVQE 157 (333)
T ss_pred ----cCCceEEEEEEEEeccccCCceEEEeC-------------CCceEeeccc-eee---------eccccccceeeec
Confidence 234567999999999999999998843 1122222333 444 5679999999999
Q ss_pred ceeeeeEEEE
Q 021375 245 GEMWSAVKFF 254 (313)
Q Consensus 245 G~K~iat~Wi 254 (313)
|+|.+|-.=+
T Consensus 158 G~K~Vali~V 167 (333)
T PHA02866 158 GEKIVVAVKV 167 (333)
T ss_pred CcEEEEEEEE
Confidence 9998774433
No 16
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=97.81 E-value=0.0002 Score=67.20 Aligned_cols=188 Identities=13% Similarity=0.141 Sum_probs=96.7
Q ss_pred cCCceeEEeecCCcEEEEcCCCCHHHHHHHHHHhccCCccceeeCCCCCc--ccccccccccccccCCccHHHH------
Q 021375 53 VDPSRVTQISWRPRVFLYRGLLSNEECDHLISLGHGAEKKYKRTGEDPEN--VSKNKQNSSFRTELNIEDDIVA------ 124 (313)
Q Consensus 53 ~~P~kve~ls~~P~i~v~~~fLs~~EC~~Li~~a~~~l~~s~v~~~~~g~--~~~~~~RtS~~~~l~~~d~vv~------ 124 (313)
+.+..++....+-++ ++++||+++|++.|.+..+..+....+.....+. ......|.....+ ..++.+.
T Consensus 17 Lt~eqi~~f~~dGyv-vl~~vls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~~~l~~~p 93 (277)
T TIGR02408 17 LSAKQLQSYERDGFL-LLENLFSDDEVAALLAEVERMTRDPAIVRDEEAITEPGSNAVRSIFEVH--VLSPILARLVRDP 93 (277)
T ss_pred CCHHHHHHHHHCCEE-ECcccCCHHHHHHHHHHHHHHHhcccccCCCcceecCCCCceEEEeccc--ccCHHHHHHHcCh
Confidence 333334444455555 6899999999999998776543221111000000 0001122111111 2233332
Q ss_pred HHHHHHHhhcCCCCCCCCcceEeeecC--CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCC-ccccc-CCCccc--
Q 021375 125 RIEEKILTWTFLPKENSKPVHVMRYGL--DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQG-GELLF-PNSEEK-- 198 (313)
Q Consensus 125 ~i~~Ri~~~tglp~~~~E~lqv~rY~~--~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~G-GeT~F-P~~~~~-- 198 (313)
+|.+.+++++|-+.......-+.+.+. +.+.+|.|...-.........+.+|+.|+|.|+.+. |.+.| |.....
T Consensus 94 ~l~~~~~~LlG~~~~l~~~~l~~kp~~~g~~~~WHQD~~~w~~~~~~p~~~~vt~wiaLdD~t~eNG~l~vIPGSH~~~~ 173 (277)
T TIGR02408 94 RVANAARQILGSDVYVHQSRINMKPGFKGTGFYWHSDFETWHAEDGMPSMRAVSCSIALTDNNETNGPLMLVPGSHRTFI 173 (277)
T ss_pred HHHHHHHHHcCCCeEEEeeeeeecCCCCCCCccCCcCCccccccCCCCCcCeEEEEEEcccCCCCCCCEEEecCCCCCcc
Confidence 455556677775432211111234443 467899996421100001134689999999998753 66655 654311
Q ss_pred ----cc---ccc-----------c-------ccC-cCeeEecccceEEEEeccCCCCCCCCCCcccccccccc-eeeeeE
Q 021375 199 ----DK---MWS-----------D-------CAK-TSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEG-EMWSAV 251 (313)
Q Consensus 199 ----~~---~~~-----------~-------c~~-~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G-~K~iat 251 (313)
+. .+. + ... .-+.+.-++|++|+|.. +++|++-|..+. .++++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~~aGDvl~f~~---------~~~H~S~~N~s~~~R~~l~ 244 (277)
T TIGR02408 174 SCVGETPRDNYKQSLKKQEYGVPDPVSLTKLADQGGISTFTGKAGSAVWFDC---------NTMHGSGSNITPWPRSNVF 244 (277)
T ss_pred cCCccccchhhhhhhhhhhcCCCCHHHHHHHHHhCCceeeccCCceEEEEcc---------ccccCCCCCCCCCcceeEE
Confidence 00 000 0 000 11245569999999966 899999998875 455554
Q ss_pred E
Q 021375 252 K 252 (313)
Q Consensus 252 ~ 252 (313)
.
T Consensus 245 l 245 (277)
T TIGR02408 245 M 245 (277)
T ss_pred E
Confidence 4
No 17
>COG3751 EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=97.37 E-value=0.00096 Score=61.72 Aligned_cols=102 Identities=20% Similarity=0.233 Sum_probs=76.4
Q ss_pred CcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecC---CCCCccc-ccCCCcccccccccccCcCeeEeccc
Q 021375 142 KPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSN---VTQGGEL-LFPNSEEKDKMWSDCAKTSNVLRPVK 216 (313)
Q Consensus 142 E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnD---v~~GGeT-~FP~~~~~~~~~~~c~~~~~~V~Pkk 216 (313)
-..|+.-|.+ -+|..|-|.+.+ ...|.+|.++|++. ++-||+. .|+.+... -+ .+...-.+.|+=
T Consensus 136 ve~~~~~y~~G~~l~~H~D~~~~------~~~R~~~yv~y~~r~wkpe~GGeL~l~~s~~~~-~~---~~~~~~ti~P~f 205 (252)
T COG3751 136 VEGQITVYNPGCFLLKHDDNGRD------KDIRLATYVYYLTREWKPEYGGELRLFHSLQKN-NT---AADSFKTIAPVF 205 (252)
T ss_pred eeeeeeEecCCceeEeecccCCC------ccceEEEEEeccCCCCCcCCCCceeeccccccc-cc---ccccccccCCCC
Confidence 3689999999 999999998864 36799999999997 5679999 88886311 00 011245789999
Q ss_pred ceEEEEeccCCCCCCCCCCcccccccc-cceeeeeEEEEEeccc
Q 021375 217 GNAILFFTVHPNAAPDESSSHTRCPVL-EGEMWSAVKFFQVKAA 259 (313)
Q Consensus 217 G~AllF~n~~~~g~~D~~slH~gcPV~-~G~K~iat~Wi~~~~~ 259 (313)
+..++|-+-. ..+.|.+.+|. .+.+..++-|++.+..
T Consensus 206 n~lv~F~s~~------~Hs~h~V~~~~~~~~RlsV~GW~r~~~~ 243 (252)
T COG3751 206 NSLVFFKSRP------SHSVHSVEEPYAAADRLSVTGWFRRPGP 243 (252)
T ss_pred ceEEEEEecC------CccceeccccccccceEEEeeEEecCCC
Confidence 9888887621 24778777754 4688999999998754
No 18
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [].; PDB: 3GJA_A 3EMR_A 3OBZ_A 2OPW_A 3NNL_B 3NNF_A 3NNM_B 3NNJ_A 2FCV_B 2FCU_A ....
Probab=97.24 E-value=0.00085 Score=58.07 Aligned_cols=162 Identities=14% Similarity=0.053 Sum_probs=81.7
Q ss_pred EEEEcCCCCHHHHHHHHHHhccC----Ccc-ceeeCCCCCcccccccccccccccC----CccHHH-H-HHHHHHHhhcC
Q 021375 67 VFLYRGLLSNEECDHLISLGHGA----EKK-YKRTGEDPENVSKNKQNSSFRTELN----IEDDIV-A-RIEEKILTWTF 135 (313)
Q Consensus 67 i~v~~~fLs~~EC~~Li~~a~~~----l~~-s~v~~~~~g~~~~~~~RtS~~~~l~----~~d~vv-~-~i~~Ri~~~tg 135 (313)
.++++|+|+++|++.|.+..... ... ........+.. ......++. ..+.+. . .+.+.++++.|
T Consensus 6 yvvi~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (211)
T PF05721_consen 6 YVVIRNVLSPEEVERLREELDRLDDRALEPDQDVSDFFDESF-----FGDYTEQLAKSPNFYDLFLHPPRILDLVRALLG 80 (211)
T ss_dssp EEEETTSS-HHHHHHHHHHHHHHHHHHTTTTTSCEEEESTSC-----CCTCCCCGCCCHHHHHHHHTHHHHHHHHHHHHT
T ss_pred EEEECCcCCHHHHHHHHHHHHHHHhhhhcccccccccccccc-----ccccccccccchhhHHHHhhHHHHHHHHHHhhC
Confidence 35799999999999998877642 111 00000000000 000111111 001111 2 56666777777
Q ss_pred CCCC----CCCcce-EeeecC-CC--ccccccCCCCCCCCCCCCCeeEEEEeeecCCC-CCccccc-CCCcccc------
Q 021375 136 LPKE----NSKPVH-VMRYGL-DE--AKENLDYFGNKSALGLSQPLMAAVVLYLSNVT-QGGELLF-PNSEEKD------ 199 (313)
Q Consensus 136 lp~~----~~E~lq-v~rY~~-~~--y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~-~GGeT~F-P~~~~~~------ 199 (313)
-+.. ....++ +.+-.. +. ..+|.|...-.. ....+.+|+.|+|.|+. +.|.+.+ |......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~wH~D~~~~~~---~~~~~~~~~wi~L~d~~~~~G~~~v~pGSH~~~~~~~~~ 157 (211)
T PF05721_consen 81 SDVFVQNWLQSMYQDIVKPPGPGAAVQPWHQDAPYWHT---DPPENQLTVWIALDDITPENGPLEVVPGSHKWGVEPHEE 157 (211)
T ss_dssp SSEEEE--EEEEEEEEEE-TTTTC-EEEEBEHHHCSTE---ESSSCEEEEEEESS-BBTTCTCEEEETTGCCSCCEEECC
T ss_pred CcchhhhhhHHHHHhhhhccccCCCCCCCCCCCccccc---CCccceEEEEEeeccCCcccCceEeecCCcCCCcccccc
Confidence 6532 111121 222222 33 489999754321 01578999999999985 4455544 6543110
Q ss_pred cc--cc-c---------ccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccc
Q 021375 200 KM--WS-D---------CAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEG 245 (313)
Q Consensus 200 ~~--~~-~---------c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G 245 (313)
.. .. . .....+.+..++|++|||.. +++|++-|-...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gdvl~~~~---------~~~H~s~~N~s~ 206 (211)
T PF05721_consen 158 RFPEEDFPEEDDEESDEDEDEWVPVPMKAGDVLFFHS---------RLIHGSGPNTSD 206 (211)
T ss_dssp CCCCCCCCCCHHHHHHHHCSGCEEE-BSTTEEEEEET---------TSEEEEE-B-SS
T ss_pred cccccccccccccccccccCceEEeecCCCeEEEEcC---------CccccCCCCCCc
Confidence 00 00 0 01235788899999999976 899999986643
No 19
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=97.07 E-value=0.0019 Score=55.87 Aligned_cols=101 Identities=26% Similarity=0.347 Sum_probs=71.6
Q ss_pred cceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCC---CCCcccccCCCcccccccccccCcCeeEecccce
Q 021375 143 PVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNV---TQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGN 218 (313)
Q Consensus 143 ~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv---~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~ 218 (313)
..-+++|++ ++=-.|.|...+..- -+-+.+-||++ +.|||.+.-.-.+... .....+.+++|+
T Consensus 63 tplllrY~~gdyn~LHqdlyGe~vF-------PlQvv~lLs~Pg~DftGGEFVltEQrPR~Q------SR~~V~~L~qGd 129 (173)
T PF09859_consen 63 TPLLLRYGPGDYNCLHQDLYGEHVF-------PLQVVILLSEPGEDFTGGEFVLTEQRPRMQ------SRAMVLPLRQGD 129 (173)
T ss_pred chhhheeCCCCccccccCCCCCccc-------CeEEEEEcCCCCCcccCceEEEEEecCCcc------CccccCCcCCCC
Confidence 456899999 777789887544211 13577889985 4799998754321110 136778999999
Q ss_pred EEEEeccC-C----CCCCCCCCcccccccccceeeeeEEEEEe
Q 021375 219 AILFFTVH-P----NAAPDESSSHTRCPVLEGEMWSAVKFFQV 256 (313)
Q Consensus 219 AllF~n~~-~----~g~~D~~slH~gcPV~~G~K~iat~Wi~~ 256 (313)
|++|..-+ | .|.--....|+..+|.+|+++.+-.=||.
T Consensus 130 a~if~t~~RPv~G~rG~yRv~~RHgVS~vrsG~R~tLgliFHD 172 (173)
T PF09859_consen 130 ALIFATNHRPVRGARGYYRVNMRHGVSRVRSGERHTLGLIFHD 172 (173)
T ss_pred EEEEecCCCCcCCCccceecccccccccccccceEEEEEEeec
Confidence 99997543 2 12233478999999999999999888875
No 20
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=96.44 E-value=0.045 Score=51.79 Aligned_cols=176 Identities=12% Similarity=0.071 Sum_probs=92.0
Q ss_pred cCCcEEEEcCCCCHHHHHHHHHHhccCCc-cceeeCCCCCcccccccccccccccCCccHHH------HHHHHHHHhhcC
Q 021375 63 WRPRVFLYRGLLSNEECDHLISLGHGAEK-KYKRTGEDPENVSKNKQNSSFRTELNIEDDIV------ARIEEKILTWTF 135 (313)
Q Consensus 63 ~~P~i~v~~~fLs~~EC~~Li~~a~~~l~-~s~v~~~~~g~~~~~~~RtS~~~~l~~~d~vv------~~i~~Ri~~~tg 135 (313)
.+-++ +++++||++|++.|.+.++..+. ++.......+. ..|... +....++.+ .+|...+++++|
T Consensus 13 e~Gyv-~~~~~~s~eei~~L~~~~~~~l~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~llG 85 (288)
T TIGR01762 13 KNGFI-GPFTLYSPEEMKETWKRIRLRLLDRSAAPYQDLGG----TNIANY--DRHLDDDFLASHICRPEICHRVESILG 85 (288)
T ss_pred hCCEE-eCcCCCCHHHHHHHHHHHHHHhhccccccccCCCC----ceeEee--eecccCHHHHHHhcCHHHHHHHHHHhC
Confidence 34444 68999999999999987754332 21111100011 111111 000112222 345556667777
Q ss_pred CCCCCCCcceEeeecC-CCccccccCCCCCCC--------CCCCCCeeEEEEeeecCCCC-Cccccc-CCCccc---c--
Q 021375 136 LPKENSKPVHVMRYGL-DEAKENLDYFGNKSA--------LGLSQPLMAAVVLYLSNVTQ-GGELLF-PNSEEK---D-- 199 (313)
Q Consensus 136 lp~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~--------~~~~~~R~~TvLiYLnDv~~-GGeT~F-P~~~~~---~-- 199 (313)
-++...-..-+.+... +...+|.|...-... ......+.+|+.|-|.|+.. -|.+.| |..... +
T Consensus 86 ~~v~l~~~~~~~K~pg~~~~~wHQD~~y~~~~~~~~~~~p~~~~~~~~vt~wiaLdd~t~eNG~L~viPGSH~~~~~~~~ 165 (288)
T TIGR01762 86 PNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQLVWPENEEFGGTITVWTAFTDATIENGCMQFIPGTHNSMNYDET 165 (288)
T ss_pred CcEEeeeceeeeeCCCCCCCCCCccCcccccCCcccccccccCCCCCeEEEEEEcccCCcccCCEEEECCCCCCCCCCcc
Confidence 5542222222344444 558899995331110 01123589999999999763 344444 443210 0
Q ss_pred ---------------------------------cccccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccce
Q 021375 200 ---------------------------------KMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGE 246 (313)
Q Consensus 200 ---------------------------------~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~ 246 (313)
..+......-+.+.=++|++++|.. .++|++-|-.+..
T Consensus 166 ~~~~~~p~~~~~~~~g~~~~~~~~~~~~~l~~d~~~~~~~~~~v~~~lkaGd~~~f~~---------~t~HgS~~N~S~~ 236 (288)
T TIGR01762 166 RRMTFEPDANNSVVKGGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFWS---------TLMHASYPNSGES 236 (288)
T ss_pred cccccCccccccccccccccccccccchhhcccccCCccccceeeeeeCCceEEEECC---------CceecCCCCCCCC
Confidence 0000011123456668999999965 8999999998853
Q ss_pred --eeee-EEEE
Q 021375 247 --MWSA-VKFF 254 (313)
Q Consensus 247 --K~ia-t~Wi 254 (313)
++.+ ..|+
T Consensus 237 ~~R~~~~~ry~ 247 (288)
T TIGR01762 237 QMRMGFASRYV 247 (288)
T ss_pred ceEEEEEEEEc
Confidence 4443 3454
No 21
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=96.09 E-value=0.013 Score=46.33 Aligned_cols=70 Identities=20% Similarity=0.151 Sum_probs=38.3
Q ss_pred CeeEEEEeeecCCCCCcccccCCCcccc-----c---ccccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccc
Q 021375 172 PLMAAVVLYLSNVTQGGELLFPNSEEKD-----K---MWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVL 243 (313)
Q Consensus 172 ~R~~TvLiYLnDv~~GGeT~FP~~~~~~-----~---~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~ 243 (313)
...++.++||+-+++.|.+.|....... . ....-......++|+.|+.|||++ ...|+..|-.
T Consensus 20 ~s~~SgVyYv~~p~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~G~lvlFPs---------~l~H~v~p~~ 90 (101)
T PF13759_consen 20 NSWLSGVYYVQVPEGSGPLRFHDPRGSFSFGAPFDNYDQNDLNSPYYIVEPEEGDLVLFPS---------WLWHGVPPNN 90 (101)
T ss_dssp T-SEEEEEECE--TTS-SEEEE-TTCCCGTTS----TTTTCCC-SEEEE---TTEEEEEET---------TSEEEE----
T ss_pred CcCEEEEEEEECCCCCCceeeeCCCccceecccccccccCcccCceEEeCCCCCEEEEeCC---------CCEEeccCcC
Confidence 3478899999998888888886532100 0 001111246789999999999998 7999999987
Q ss_pred cc-eeeee
Q 021375 244 EG-EMWSA 250 (313)
Q Consensus 244 ~G-~K~ia 250 (313)
.. .+.++
T Consensus 91 ~~~~Risi 98 (101)
T PF13759_consen 91 SDEERISI 98 (101)
T ss_dssp SSS-EEEE
T ss_pred CCCCEEEE
Confidence 64 55544
No 22
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=95.72 E-value=0.098 Score=47.04 Aligned_cols=88 Identities=16% Similarity=0.135 Sum_probs=57.5
Q ss_pred cceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccc--------cccccccCcCeeEe
Q 021375 143 PVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKD--------KMWSDCAKTSNVLR 213 (313)
Q Consensus 143 ~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~--------~~~~~c~~~~~~V~ 213 (313)
..-+.++.+ ++-..|+- .+..++-.+||+-++.+|...|-...... ..........+.|+
T Consensus 97 ~~W~ni~~~Gg~h~~H~H-----------p~~~lSgvyYl~~p~~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~ 165 (201)
T TIGR02466 97 KAWVNILPQGGTHSPHLH-----------PGSVISGTYYVQTPENCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVP 165 (201)
T ss_pred eEeEEEcCCCCccCceEC-----------CCceEEEEEEEeCCCCCCceeEecCcchhhhccccccCccccccCccEEEC
Confidence 344556667 65555542 24478999999998888888874322000 00001112355799
Q ss_pred cccceEEEEeccCCCCCCCCCCccccccccc-ceeeee
Q 021375 214 PVKGNAILFFTVHPNAAPDESSSHTRCPVLE-GEMWSA 250 (313)
Q Consensus 214 PkkG~AllF~n~~~~g~~D~~slH~gcPV~~-G~K~ia 250 (313)
|+.|+.|||++ ...|+..|-.. +++.++
T Consensus 166 P~~G~lvlFPS---------~L~H~v~p~~~~~~RISi 194 (201)
T TIGR02466 166 PQEGRVLLFES---------WLRHEVPPNESEEERISV 194 (201)
T ss_pred CCCCeEEEECC---------CCceecCCCCCCCCEEEE
Confidence 99999999999 79999999875 456554
No 23
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=95.49 E-value=0.047 Score=47.81 Aligned_cols=79 Identities=20% Similarity=0.231 Sum_probs=58.2
Q ss_pred CccccccCCCCCCCCCCCCCeeEEEEeeecCC-CCCcccccCCCcccccccccccCcCeeEecccceEEEEeccCCCCCC
Q 021375 153 EAKENLDYFGNKSALGLSQPLMAAVVLYLSNV-TQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAP 231 (313)
Q Consensus 153 ~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv-~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~ 231 (313)
....|.|... .+--+|+++-|.-. +.||..++|..++. -.|++|.|..|++|+|-.
T Consensus 86 ~t~~HrD~~~--------~~~~~~~~~t~~~gd~~~g~l~lp~~~~~--------~~g~~~~~~~GtVl~~~~------- 142 (171)
T PF12851_consen 86 CTHSHRDTHN--------MPNGYDVLCTLGRGDYDGGRLELPGLDPN--------ILGVAFAYQPGTVLIFCA------- 142 (171)
T ss_pred CccceecCCC--------CCCCeEEEEecCCccccCceEeccccccc--------cCCEEEecCCCcEEEEcc-------
Confidence 4556777543 22346777766543 88999999992100 028999999999999965
Q ss_pred CCCCccccccccc-----ceeeeeEEEEE
Q 021375 232 DESSSHTRCPVLE-----GEMWSAVKFFQ 255 (313)
Q Consensus 232 D~~slH~gcPV~~-----G~K~iat~Wi~ 255 (313)
....|+..||.. |+++.+.-+.|
T Consensus 143 -~~~~Hgvtpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 143 -KRELHGVTPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred -cceeeecCcccCCCCCCCeEEEEEEEeE
Confidence 268999999997 99999988766
No 24
>KOG3844 consensus Predicted component of NuA3 histone acetyltransferase complex [Chromatin structure and dynamics]
Probab=94.00 E-value=0.27 Score=48.26 Aligned_cols=116 Identities=23% Similarity=0.206 Sum_probs=79.6
Q ss_pred HHHHHHHHhhcCCCCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCC----CCccc-ccCCCcc
Q 021375 124 ARIEEKILTWTFLPKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVT----QGGEL-LFPNSEE 197 (313)
Q Consensus 124 ~~i~~Ri~~~tglp~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~----~GGeT-~FP~~~~ 197 (313)
.....-++.++|--....-++-+..|.. .+--.|=|-. +.|...+++||.|.. -||+. .||...+
T Consensus 99 ke~r~~~q~vtg~~s~sk~Dms~s~Y~kgd~LL~HDD~i---------etRriaFilYL~~~Dwds~~GG~L~Lf~~d~~ 169 (476)
T KOG3844|consen 99 KEARGEIQDVTGGLSTSKIDMSGSYYRKGDHLLCHDDVI---------ETRRIAFILYLVDPDWDSEYGGELRLFPDDCP 169 (476)
T ss_pred HHHHHHHHhccCccccceeeeceeeeeccceeccccccc---------cceEEEEEEEecCcccccccCceeEecccccc
Confidence 3445556667755444456788999999 8888887753 457777999999876 37766 5776431
Q ss_pred cccccccccCcCeeEecccceEEEEeccCCCCCCCCCCccccccccccee-eeeEEEEEecccc
Q 021375 198 KDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEM-WSAVKFFQVKAAN 260 (313)
Q Consensus 198 ~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K-~iat~Wi~~~~~~ 260 (313)
.-. .+- -.++.|+--..++|.- -|.|.|....|++.++ .+++-|+|.....
T Consensus 170 ~~P-~s~----~asl~P~~Nql~fFeV-------sp~SFH~V~Ev~sde~RlSIsGWfH~p~~~ 221 (476)
T KOG3844|consen 170 SQP-KSV----AASLEPQWNQLVFFEV-------SPISFHDVEEVLSDEPRLSISGWFHFPQIG 221 (476)
T ss_pred cCc-cch----hhccCcccceEEEEEe-------cccchhhHHHHhccCcceeEeeeecCCccC
Confidence 100 011 2347777777777754 3589999999998766 8999999986543
No 25
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=93.75 E-value=0.35 Score=42.19 Aligned_cols=152 Identities=15% Similarity=0.084 Sum_probs=73.2
Q ss_pred EEEEcCCCCHHHHHHHHHHhccC--CccceeeCCCCCccc---------------ccccccccc-cccC----CccHHHH
Q 021375 67 VFLYRGLLSNEECDHLISLGHGA--EKKYKRTGEDPENVS---------------KNKQNSSFR-TELN----IEDDIVA 124 (313)
Q Consensus 67 i~v~~~fLs~~EC~~Li~~a~~~--l~~s~v~~~~~g~~~---------------~~~~RtS~~-~~l~----~~d~vv~ 124 (313)
+++++||||++|.+.|++..... +....... ++.. ...++.+.. ..-. .-.+.+.
T Consensus 2 ~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~y~y~~~~~~~~~~~~~~p~~l~ 78 (194)
T PF13532_consen 2 LYYIPNFLSEEEAAELLNELRESAPFRQPTYPM---GKVYSLPRKLCGGLSWVGDGPSYRYSGKRPVRSKPWPPFPEWLS 78 (194)
T ss_dssp EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCC---CCECCECCE-SSEEEEEECT--CCCTCC-EECCCEBSCCHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcC---CCEEccceecceeeEEECCCCCeEcCCccccCCCCCCCccHHHH
Confidence 57899999999999999887631 11111110 1100 011121111 1101 1123456
Q ss_pred HHHHHHHhhcC-CCCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCccccccc
Q 021375 125 RIEEKILTWTF-LPKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMW 202 (313)
Q Consensus 125 ~i~~Ri~~~tg-lp~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~ 202 (313)
.+.+++....+ .+........|..|.. +.-.+|.|.... .-+..++|+-+ |+..+|-.-...+
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~liN~Y~~g~~i~~H~D~~~~-----~~~~~I~slSL-------G~~~~~~f~~~~~--- 143 (194)
T PF13532_consen 79 RLLERLVEATGIPPGWRPNQCLINYYRDGSGIGPHSDDEEY-----GFGPPIASLSL-------GSSRVFRFRNKSD--- 143 (194)
T ss_dssp HHHHHHHHHHT-SHSS--SEEEEEEESSTT-EEEE---TTC------CCSEEEEEEE-------ES-EEEEEEECGG---
T ss_pred HHHHHHHHHhccccCCCCCEEEEEecCCCCCcCCCCCcccc-----cCCCcEEEEEE-------ccCceEEEeeccC---
Confidence 66666665544 2222334566778999 999999997632 13566777665 3333332110000
Q ss_pred ccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccc
Q 021375 203 SDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEG 245 (313)
Q Consensus 203 ~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G 245 (313)
.+..+.|.-..|+++++.. ...... |+..|+..+
T Consensus 144 ---~~~~~~~~L~~gsl~vm~g-----~~r~~~-H~I~~~~~~ 177 (194)
T PF13532_consen 144 ---DDEPIEVPLPPGSLLVMSG-----EARYDW-HGIPPVKKD 177 (194)
T ss_dssp ---TS-EEEEEE-TTEEEEEET-----THHHHE-EEE-S-SCE
T ss_pred ---CCccEEEEcCCCCEEEeCh-----HHhhhe-eEcccccCC
Confidence 0125778888999999963 112234 888888764
No 26
>PHA02923 hypothetical protein; Provisional
Probab=91.98 E-value=0.24 Score=46.82 Aligned_cols=102 Identities=19% Similarity=0.222 Sum_probs=67.8
Q ss_pred ccHHHHHHHHHHHhhcCCC--CCCCCcceEeeecCCCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCc
Q 021375 119 EDDIVARIEEKILTWTFLP--KENSKPVHVMRYGLDEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSE 196 (313)
Q Consensus 119 ~d~vv~~i~~Ri~~~tglp--~~~~E~lqv~rY~~~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~ 196 (313)
.+++...|++.|-+-+... +.-.-.+.++.|++|-| -|. .....-+.+|+||+.++.||+|.|+..
T Consensus 42 ~~di~~~ir~liy~elk~v~~V~V~n~iT~ikYekgd~-~~l----------~~~~~~y~LvLyL~~p~~GGt~i~~~~- 109 (315)
T PHA02923 42 TIDISECIREILYKQFKNVRNIEVSSTISFIKYNPFND-TTL----------TDDNMGYYLVIYLNRPKSGKTLIYPTP- 109 (315)
T ss_pred chHHHHHHHHHHHHhccCcceEEEeceEEEEEEcCCCc-cee----------ecCceEEEEEEEEeccCCCCeEEEecC-
Confidence 3567777777776543322 22345688999999333 111 012377889999999999999999875
Q ss_pred ccccccccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccceeeeeEEEEEe
Q 021375 197 EKDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQV 256 (313)
Q Consensus 197 ~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~ 256 (313)
+ .+--.+-+ ++| |....|...-|.+|.|.||-. +-.
T Consensus 110 ------------~-t~i~~~~D-vLF---------dKsl~h~s~~V~~G~K~VAl~-V~l 145 (315)
T PHA02923 110 ------------E-TVITSSED-IMF---------SKSLNFRFENVKRGYKLVMCS-ISL 145 (315)
T ss_pred ------------C-CeEeeccc-eee---------ecccccceeeeecCcEEEEEE-EEE
Confidence 2 22222333 444 567899999999999998766 443
No 27
>KOG3371 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.12 E-value=0.12 Score=47.69 Aligned_cols=38 Identities=21% Similarity=0.586 Sum_probs=28.8
Q ss_pred CCCCcCCCCCchhHhhcCccc-cCccccccCccCcchhhhhcCCC
Q 021375 270 SNECTDEDDNCPHWAAVGECQ-RNPVYMLGSPDYYGTCRKSCHAC 313 (313)
Q Consensus 270 ~~~C~d~~~~C~~Wa~~geC~-~n~~~M~g~~~~~~~C~~sC~~C 313 (313)
...|+|....|+.|++.+.=. .+-.|.. .||++|||.|
T Consensus 24 ~~~c~di~~~c~~w~~s~~~~r~~~~f~~------~nc~~Sc~~c 62 (243)
T KOG3371|consen 24 ARKCRDIYKSCDRWKRSDHSSRPITEFFD------LNCATSCGNC 62 (243)
T ss_pred hhhhhhhhhhhhhhhhcCccccchhHHhh------hhhhhhccCc
Confidence 457999999999999987211 1234444 8999999998
No 28
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=83.50 E-value=35 Score=31.02 Aligned_cols=158 Identities=14% Similarity=0.118 Sum_probs=88.9
Q ss_pred cCCcEEEEcCCCCHHHHHHHHHHhcc-----CCccceeeCCC--------CCc---c-cccccccccccccC-----Ccc
Q 021375 63 WRPRVFLYRGLLSNEECDHLISLGHG-----AEKKYKRTGED--------PEN---V-SKNKQNSSFRTELN-----IED 120 (313)
Q Consensus 63 ~~P~i~v~~~fLs~~EC~~Li~~a~~-----~l~~s~v~~~~--------~g~---~-~~~~~RtS~~~~l~-----~~d 120 (313)
..|.++++++|+ .+|.++|++..+. .+.+-.+.++. -|+ . ....+|-|...-.. .-.
T Consensus 16 ~~~g~~~~~~~~-~~~~~~l~~~~~~~~~~~p~~~~~~~gg~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~~P 94 (213)
T PRK15401 16 LAPGAVLLRGFA-LAAAEALLAAIEAVAAQAPFRHMVTPGGYTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPAMP 94 (213)
T ss_pred cCCCcEEeCCCC-HHHHHHHHHHHHHHHhcCCccceecCCCCcceeEEeccccceEecCCCCcccCCcCCCCCCCCCCch
Confidence 477889999996 7887877765543 12221111100 010 0 01245555321111 112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccc
Q 021375 121 DIVARIEEKILTWTFLPKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKD 199 (313)
Q Consensus 121 ~vv~~i~~Ri~~~tglp~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~ 199 (313)
+.+..|.++++...+.+.-..+..-|-.|.+ +.-.+|.|..... .+.-++++-+ |.+-+|-.-..+.
T Consensus 95 ~~l~~L~~~~~~~~~~~~~~p~a~LvN~Y~~G~~mg~H~D~~E~~-----~~~pI~SvSL-------G~~~~F~~~~~~~ 162 (213)
T PRK15401 95 ASFLALAQRAAAAAGFPGFQPDACLINRYAPGAKLSLHQDKDERD-----FRAPIVSVSL-------GLPAVFQFGGLKR 162 (213)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEeccCcCccccccCCCccc-----CCCCEEEEeC-------CCCeEEEecccCC
Confidence 3688899999888887544456678888999 9999999963211 1223444442 3333443210000
Q ss_pred cccccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccc
Q 021375 200 KMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEG 245 (313)
Q Consensus 200 ~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G 245 (313)
.....++.-.-||+|++-. . ....+|+.-|+..|
T Consensus 163 ------~~~~~~l~L~~Gdllvm~G-----~-sr~~~HgVp~~~~~ 196 (213)
T PRK15401 163 ------SDPLQRILLEHGDVVVWGG-----P-SRLRYHGILPLKAG 196 (213)
T ss_pred ------CCceEEEEeCCCCEEEECc-----h-HhheeccCCcCCCC
Confidence 0124678889999999832 2 23566888887754
No 29
>PLN02485 oxidoreductase
Probab=82.44 E-value=4.3 Score=38.91 Aligned_cols=110 Identities=11% Similarity=0.015 Sum_probs=64.0
Q ss_pred HHHHHHHHhhcCCCCCC------CC---cceEeeecC-CC----------ccccccCCCCCCCCCCCCCeeEEEEeeecC
Q 021375 124 ARIEEKILTWTFLPKEN------SK---PVHVMRYGL-DE----------AKENLDYFGNKSALGLSQPLMAAVVLYLSN 183 (313)
Q Consensus 124 ~~i~~Ri~~~tglp~~~------~E---~lqv~rY~~-~~----------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnD 183 (313)
.+|.+-++..+|+|.+. .+ .+++++|.+ .. -.+|.|+. .+|+|+ .|
T Consensus 157 ~~ll~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~~~~~~~~g~~~HTD~g------------~lTlL~--qd 222 (329)
T PLN02485 157 RKILRGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLNGPPENDIGCGAHTDYG------------LLTLVN--QD 222 (329)
T ss_pred HHHHHHHHHHcCCChHHhhhhhccCccceEEEEeCCCCccccCCcccCcccccccCCC------------eEEEEe--cc
Confidence 34444455557776421 11 478888977 42 23555542 567763 44
Q ss_pred CCCCcccccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 184 VTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 184 v~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
...||-=+... ++ .-+.|.|..|..||--. ...|| .-..++|.+.+....++|++.-+++-...
T Consensus 223 ~~~~GLqV~~~----~g-------~Wi~V~p~pg~~vVNiGD~L~~~TnG-~~~St~HRVv~~~~~~R~Si~~F~~p~~d 290 (329)
T PLN02485 223 DDITALQVRNL----SG-------EWIWAIPIPGTFVCNIGDMLKIWSNG-VYQSTLHRVINNSPKYRVCVAFFYETNFD 290 (329)
T ss_pred CCCCeeeEEcC----CC-------cEEECCCCCCcEEEEhHHHHHHHHCC-EeeCCCceecCCCCCCeEEEEEEecCCCC
Confidence 44566434332 22 24889999998877411 11122 33578999986555578999888765544
No 30
>KOG3200 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.41 E-value=7.2 Score=34.46 Aligned_cols=94 Identities=14% Similarity=0.015 Sum_probs=54.7
Q ss_pred EeecCCcEEEEcCCCCHHHHHHHHHHhccCCcc-ceeeC-----CCCCcccccccccccccccC-CccHHHHHHHHHHHh
Q 021375 60 QISWRPRVFLYRGLLSNEECDHLISLGHGAEKK-YKRTG-----EDPENVSKNKQNSSFRTELN-IEDDIVARIEEKILT 132 (313)
Q Consensus 60 ~ls~~P~i~v~~~fLs~~EC~~Li~~a~~~l~~-s~v~~-----~~~g~~~~~~~RtS~~~~l~-~~d~vv~~i~~Ri~~ 132 (313)
++...|.++.++||+|+||-..+.+..+..-++ -.+.. +-.|- +- ....+. .-.+-.+.+...|..
T Consensus 7 ~V~~~pt~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~NRRLqNyGGv-vh------~~glipeelP~wLq~~v~kinn 79 (224)
T KOG3200|consen 7 IVKSAPTMIYIPNFITEEEENLYLSHIENAPQPKWRVLANRRLQNYGGV-VH------KTGLIPEELPPWLQYYVDKINN 79 (224)
T ss_pred EecccceEEEcCCccChHHHHHHHHHHhcCCCchhHHHHhhhhhhcCCc-cc------cCCcCccccCHHHHHHHHHhhc
Confidence 456788999999999999999988776532111 00100 00011 00 011122 223455666666664
Q ss_pred hcCCCCCCCCcceEeeecC-CCccccccCC
Q 021375 133 WTFLPKENSKPVHVMRYGL-DEAKENLDYF 161 (313)
Q Consensus 133 ~tglp~~~~E~lqv~rY~~-~~y~~H~D~~ 161 (313)
+ |+=....-...|-.|.+ |.--||.|+-
T Consensus 80 l-glF~s~~NHVLVNeY~pgqGImPHtDGP 108 (224)
T KOG3200|consen 80 L-GLFKSPANHVLVNEYLPGQGIMPHTDGP 108 (224)
T ss_pred c-cccCCCcceeEeecccCCCCcCcCCCCC
Confidence 3 33223445677888999 9999999974
No 31
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=79.86 E-value=14 Score=35.75 Aligned_cols=107 Identities=16% Similarity=0.149 Sum_probs=62.1
Q ss_pred HHHHHHHHhhcCCC--CC--------CCCcceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCC
Q 021375 124 ARIEEKILTWTFLP--KE--------NSKPVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQ 186 (313)
Q Consensus 124 ~~i~~Ri~~~tglp--~~--------~~E~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~ 186 (313)
.+|.+-++..+|++ .+ ..-.+++++|.+ . ...+|.|+. .+|+|+- ++ .
T Consensus 172 ~~ll~~lA~~Lgl~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g------------~lTlL~Q-d~--v 236 (341)
T PLN02984 172 VTLFEAIAKTLSLELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSS------------VISILNQ-DE--V 236 (341)
T ss_pred HHHHHHHHHHcCCCcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCC------------ceEEEEe-CC--C
Confidence 34444444557887 31 123588999977 3 133566653 5778755 33 3
Q ss_pred CcccccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCccccc-ccccceeeeeEEEEEecc
Q 021375 187 GGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRC-PVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 187 GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gc-PV~~G~K~iat~Wi~~~~ 258 (313)
||==+.. ++ .-+.|.|..|..||--. ...|| .-..+.|.+- +-....+|++.-+++-..
T Consensus 237 ~GLQV~~-----~g-------~Wv~V~p~pgalVVNiGD~Le~wTNg-~~kSt~HRVv~~~~~~~R~Sia~F~~P~~ 300 (341)
T PLN02984 237 GGLEVMK-----DG-------EWFNVKPIANTLVVNLGDMMQVISDD-EYKSVLHRVGKRNKKKERYSICYFVFPEE 300 (341)
T ss_pred CCeeEee-----CC-------ceEECCCCCCeEEEECChhhhhhcCC-eeeCCCCccccCCCCCCeEEEEEEecCCC
Confidence 5633332 23 35889999998888421 11122 2357899993 333457888887765543
No 32
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.72 E-value=15 Score=32.72 Aligned_cols=103 Identities=17% Similarity=0.260 Sum_probs=67.6
Q ss_pred CcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCC---CCcccccCCCcccccccccccCcCeeEecccc
Q 021375 142 KPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVT---QGGELLFPNSEEKDKMWSDCAKTSNVLRPVKG 217 (313)
Q Consensus 142 E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~---~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG 217 (313)
....+++|++ .+--.|.|-..+.. =-+-+.|-|+|++ .|||.+.-.-.|... ..+-.|.=++|
T Consensus 124 pTpLlLqYgpgD~NcLHQDLYGelv-------FPLQvailLsePg~DfTGGEF~lvEQRPR~Q------Sr~~vvpLrqG 190 (236)
T COG3826 124 PTPLLLQYGPGDYNCLHQDLYGELV-------FPLQVAILLSEPGTDFTGGEFVLVEQRPRMQ------SRPTVVPLRQG 190 (236)
T ss_pred CCceeEEecCCccchhhhhhhhcee-------eeeeEEEeccCCCCcccCceEEEEecccccc------cCCceeeccCC
Confidence 3456899999 66668888654321 1244677799975 699887533221110 12445666999
Q ss_pred eEEEEeccC--CCCC---CCCCCcccccccccceeeeeEEEEEec
Q 021375 218 NAILFFTVH--PNAA---PDESSSHTRCPVLEGEMWSAVKFFQVK 257 (313)
Q Consensus 218 ~AllF~n~~--~~g~---~D~~slH~gcPV~~G~K~iat~Wi~~~ 257 (313)
++++|-..+ .+|+ --....|+..-+.+|+++.+-+=||..
T Consensus 191 ~g~vFavr~RPv~gtrG~~r~~lRHGvS~lRSG~R~t~GiIFHDA 235 (236)
T COG3826 191 DGVVFAVRDRPVQGTRGWYRVPLRHGVSRLRSGERHTVGIIFHDA 235 (236)
T ss_pred ceEEEEeecCcccCccCccccchhcchhhhhcccceeeEEEeecC
Confidence 999996543 1232 223678999999999999988777753
No 33
>KOG3959 consensus 2-Oxoglutarate- and iron-dependent dioxygenase-related proteins [General function prediction only]
Probab=77.43 E-value=3.5 Score=38.06 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=52.8
Q ss_pred CCcEEEEcCCCCHHHHHHHHHHhccC-Ccccee--eCCCCCcccc---cccccccccccCCccHHHHHHHHHHHhhcCCC
Q 021375 64 RPRVFLYRGLLSNEECDHLISLGHGA-EKKYKR--TGEDPENVSK---NKQNSSFRTELNIEDDIVARIEEKILTWTFLP 137 (313)
Q Consensus 64 ~P~i~v~~~fLs~~EC~~Li~~a~~~-l~~s~v--~~~~~g~~~~---~~~RtS~~~~l~~~d~vv~~i~~Ri~~~tglp 137 (313)
-|-|.+++||||.+|=.+|++.-..- +..|.- .-.+=|..++ ...|+-. |. +-....+.+.+|+.+.-++.
T Consensus 71 ~pG~~lie~Fls~~Eea~l~~~~D~~pW~~SQSGRRKQdyGPKvNFkk~Klkt~~--F~-G~P~~~~~v~rrm~~yp~l~ 147 (306)
T KOG3959|consen 71 IPGLTLIENFLSESEEAKLLNMIDTVPWAQSQSGRRKQDYGPKVNFKKKKLKTDT--FV-GMPEYADMVLRRMSEYPVLK 147 (306)
T ss_pred cCCeeehhhhhccchHhHHHHHhccCchhhhcccccccccCCccchhhhhhccCc--cc-CCchHHHHHHHHhhccchhh
Confidence 47899999999999999999987642 221211 0000122222 2333322 22 33456777778887764432
Q ss_pred CCCCCcce--EeeecC---CCccccccCCC
Q 021375 138 KENSKPVH--VMRYGL---DEAKENLDYFG 162 (313)
Q Consensus 138 ~~~~E~lq--v~rY~~---~~y~~H~D~~~ 162 (313)
- ..++. =+.|+| ..-+||.|-..
T Consensus 148 g--fqp~EqCnLeYep~kgsaIdpH~DD~W 175 (306)
T KOG3959|consen 148 G--FQPFEQCNLEYEPVKGSAIDPHQDDMW 175 (306)
T ss_pred c--cCcHHHcCcccccccCCccCccccchh
Confidence 1 01111 245888 56889999543
No 34
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=76.89 E-value=14 Score=34.44 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHhhcCCCCC--------CCCcceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCC
Q 021375 121 DIVARIEEKILTWTFLPKE--------NSKPVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVT 185 (313)
Q Consensus 121 ~vv~~i~~Ri~~~tglp~~--------~~E~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~ 185 (313)
.+..+|.+-++..+|+|.+ ....+++.+|.+ . ...+|.|+ -.+|+|+. +++
T Consensus 87 ~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HtD~------------g~lTlL~q-d~v- 152 (262)
T PLN03001 87 ALAQKLLAFISESLGLPCSCIEDAVGDFYQNITVSYYPPCPQPELTLGLQSHSDF------------GAITLLIQ-DDV- 152 (262)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhcCcchhheeecCCCCCCcccccCCcCCcCC------------CeeEEEEe-CCC-
Confidence 4556666666777788742 122477888866 2 13356554 26788755 333
Q ss_pred CCcccccCCCcccccccccccCcCeeEecccceEEEEe----ccCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 186 QGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFF----TVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 186 ~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~----n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
||==+.. ++ .-+.|.|..|..||-- ....|| .-..++|.+.-....++|++.-+++-...
T Consensus 153 -~GLqV~~-----~g-------~Wi~V~p~p~a~vVNiGD~l~~~tng-~~~S~~HRVv~~~~~~R~Sia~F~~p~~d 216 (262)
T PLN03001 153 -EGLQLLK-----DA-------EWLMVPPISDAILIIIADQTEIITNG-NYKSAQHRAIANANKARLSVATFHDPAKT 216 (262)
T ss_pred -CceEEee-----CC-------eEEECCCCCCcEEEEccHHHHHHhCC-ccccccceEEcCCCCCEEEEEEEEcCCCC
Confidence 5533322 22 2588999999877731 111122 33578999875445678999887765543
No 35
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=75.72 E-value=19 Score=34.65 Aligned_cols=108 Identities=18% Similarity=0.138 Sum_probs=62.3
Q ss_pred HHHHHHHhhcCCCCC--------CCCcceEeeecC-CC------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcc
Q 021375 125 RIEEKILTWTFLPKE--------NSKPVHVMRYGL-DE------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGE 189 (313)
Q Consensus 125 ~i~~Ri~~~tglp~~--------~~E~lqv~rY~~-~~------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGe 189 (313)
+|.+-++..+|+|.+ ....+++.+|.+ .. ..+|.|+. .+|+|+- |...||=
T Consensus 165 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~q--d~~v~GL 230 (337)
T PLN02639 165 RLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPN------------ALTILLQ--DQQVAGL 230 (337)
T ss_pred HHHHHHHHHcCCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCC------------ceEEEEe--cCCcCce
Confidence 444444455677642 223577888877 31 33555542 5777743 4334553
Q ss_pred cccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 190 LLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 190 T~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
=+++. + +-+.|.|..|..||--. ...|| .-..++|.+-.....++|++.-+++-...
T Consensus 231 QV~~~-----g-------~Wi~V~p~pg~lVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~p~~d 291 (337)
T PLN02639 231 QVLKD-----G-------KWVAVNPHPGAFVINIGDQLQALSNG-RYKSVWHRAVVNTDKERMSVASFLCPCDD 291 (337)
T ss_pred EeecC-----C-------eEEeccCCCCeEEEechhHHHHHhCC-eeeccCcccccCCCCCEEEEEEEecCCCC
Confidence 34432 2 35889999998888311 11122 33578999854334679999888765443
No 36
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=73.72 E-value=26 Score=33.61 Aligned_cols=90 Identities=16% Similarity=0.160 Sum_probs=55.5
Q ss_pred cceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecc
Q 021375 143 PVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPV 215 (313)
Q Consensus 143 ~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~Pk 215 (313)
.+++.+|.+ . ...+|.|+. .+|+| +.|...||==+.. ++ .-+.|.|.
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~g------------~lTlL--~qd~~v~GLQV~~-----~g-------~Wi~V~p~ 212 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDAG------------GIILL--FQDDKVSGLQLLK-----DG-------EWVDVPPM 212 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCCC------------eEEEE--EecCCCCCcCccc-----CC-------eEEECCCC
Confidence 378899976 2 244677753 57777 4443345533432 22 25889999
Q ss_pred cceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 216 KGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 216 kG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
.|..||--. ...|| .-..+.|.+.....+++|++.-+++-...
T Consensus 213 pg~lvVNiGD~l~~~Tng-~~kS~~HRVv~~~~~~R~Si~~F~~p~~d 259 (321)
T PLN02299 213 RHSIVVNLGDQLEVITNG-KYKSVMHRVVAQTDGNRMSIASFYNPGSD 259 (321)
T ss_pred CCeEEEEeCHHHHHHhCC-ceecccceeecCCCCCEEEEEEEecCCCC
Confidence 998887421 11123 33578999875456789999888775543
No 37
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=72.89 E-value=20 Score=34.76 Aligned_cols=108 Identities=15% Similarity=0.043 Sum_probs=63.2
Q ss_pred HHHHHHHhhcCCCCCC-----C----CcceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCc
Q 021375 125 RIEEKILTWTFLPKEN-----S----KPVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGG 188 (313)
Q Consensus 125 ~i~~Ri~~~tglp~~~-----~----E~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GG 188 (313)
+|.+-++..+|++.+. . -.+++.+|.+ . ...+|.|+. .+|+| +.|...||
T Consensus 177 ~ll~~la~~LGl~~~~f~~~~~~~~~~~lRl~~YPp~~~~~~~~g~~~HTD~g------------~lTlL--~qd~~v~G 242 (348)
T PLN00417 177 KFFKAMARSLELEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGS------------AFTLL--LPDKDVEG 242 (348)
T ss_pred HHHHHHHHHcCCCHHHHHHHhccCccceeeeeecCCCCCcccccCCcCccCCC------------ceEEE--EecCCCCc
Confidence 3334444456776421 1 1378899966 2 234566653 56766 34433456
Q ss_pred ccccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 189 ELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 189 eT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
==+.. ++ .-+.|.|..|..||--. ...| ..-..++|.+-+...+++|++.-+++-...
T Consensus 243 LQV~~-----~g-------~Wi~V~p~pg~lVVNiGD~Le~~Tn-g~~kSt~HRVv~~~~~~R~Si~fF~~P~~d 304 (348)
T PLN00417 243 LQFLK-----DG-------KWYKAPIVPDTILINVGDQMEIMSN-GIYKSPVHRVVTNREKERISVATFCIPGAD 304 (348)
T ss_pred eeEeE-----CC-------eEEECCCCCCcEEEEcChHHHHHhC-CeecccceEEecCCCCCEEEEEEEecCCCC
Confidence 33332 22 25889999998877421 0112 234689999976556789999888775543
No 38
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=70.09 E-value=19 Score=34.08 Aligned_cols=112 Identities=12% Similarity=0.076 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhhcCC-CCCC----CCcceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcc
Q 021375 122 IVARIEEKILTWTFL-PKEN----SKPVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGE 189 (313)
Q Consensus 122 vv~~i~~Ri~~~tgl-p~~~----~E~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGe 189 (313)
+..+|.+-++..+|+ +.+. ...+++++|.+ . .-.+|.|+. .+|+|+. |...||-
T Consensus 124 l~~~ll~~la~~Lgl~~~~~f~~~~~~lr~~~YP~~p~~~~~~g~~~HtD~g------------~lTlL~q--d~~~~GL 189 (300)
T PLN02365 124 LAMDLARKLAESLGLVEGDFFQGWPSQFRINKYNFTPETVGSSGVQIHTDSG------------FLTILQD--DENVGGL 189 (300)
T ss_pred HHHHHHHHHHHHcCCCChHHHhhcccceeeeecCCCCCccccccccCccCCC------------ceEEEec--CCCcCce
Confidence 334444445555788 5422 23578889954 2 133555542 5777744 4334553
Q ss_pred cccCCCcccccccccccCcCeeEecccceEEEEe----ccCCCCCCCCCCcccccccccceeeeeEEEEEecc
Q 021375 190 LLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFF----TVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 190 T~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~----n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~ 258 (313)
=+... .++ .-+.|.|..|..||=- ....| ..-..++|.+...-..++|++.-+++-..
T Consensus 190 qV~~~---~~g-------~Wi~V~p~pga~vVNiGD~l~~~TN-G~~~St~HRVv~~~~~~R~Si~~F~~p~~ 251 (300)
T PLN02365 190 EVMDP---SSG-------EFVPVDPLPGTLLVNLGDVATAWSN-GRLCNVKHRVQCKEATMRISIASFLLGPK 251 (300)
T ss_pred EEEEC---CCC-------eEEecCCCCCeEEEEhhHHHHHHhC-CceecccceeEcCCCCCEEEEEEEecCCC
Confidence 33321 012 2488999999888831 11112 23468999887544457999887765443
No 39
>PLN02216 protein SRG1
Probab=69.91 E-value=24 Score=34.36 Aligned_cols=107 Identities=14% Similarity=0.107 Sum_probs=60.7
Q ss_pred HHHHHHHhhcCCCCC---------CCCcceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCc
Q 021375 125 RIEEKILTWTFLPKE---------NSKPVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGG 188 (313)
Q Consensus 125 ~i~~Ri~~~tglp~~---------~~E~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GG 188 (313)
+|.+-++..+|++.+ ....+++.+|.+ . ...+|.|+ -.+|+|+.-++ .||
T Consensus 184 ~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~------------g~lTlL~q~~~--v~G 249 (357)
T PLN02216 184 ILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDA------------VGLTILLQVNE--VEG 249 (357)
T ss_pred HHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccC------------ceEEEEEecCC--CCc
Confidence 444444455677642 122577888866 2 13355553 25677744343 456
Q ss_pred ccccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEecc
Q 021375 189 ELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 189 eT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~ 258 (313)
==+.. ++ +-+.|.|..|..||--. ...|| .-..++|.+......+++++.-+++-..
T Consensus 250 LQV~~-----~g-------~Wi~V~p~pgalvVNiGD~L~~~TNG-~~kS~~HRVv~~~~~~R~Si~~F~~P~~ 310 (357)
T PLN02216 250 LQIKK-----DG-------KWVSVKPLPNALVVNVGDILEIITNG-TYRSIEHRGVVNSEKERLSVATFHNTGM 310 (357)
T ss_pred eeEEE-----CC-------EEEECCCCCCeEEEEcchhhHhhcCC-eeeccCceeecCCCCCEEEEEEEecCCC
Confidence 33432 22 25889999998887311 11122 3458899985444567898888766543
No 40
>PF06822 DUF1235: Protein of unknown function (DUF1235); InterPro: IPR009641 This family contains a number of poxviral proteins, which include Vaccinia virus, A37, the function of which is unknown.
Probab=69.80 E-value=24 Score=33.11 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=77.9
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcc
Q 021375 119 EDDIVARIEEKILTWTFLPKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEE 197 (313)
Q Consensus 119 ~d~vv~~i~~Ri~~~tglp~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~ 197 (313)
..+++..|++++.+ +.--.+.+++..|+. |-++.-. .......++|+=|..+..||..+.-...
T Consensus 31 ~~~i~~EI~kh~~e----~V~~~~~i~i~~f~~~~~~~~~~----------~~~~~~sr~lvCi~sakkGG~iii~~~~- 95 (266)
T PF06822_consen 31 VKIILSEIEKHINE----PVYVNNLISIQVFDKGQCYKSRI----------QDNSSLSRILVCIQSAKKGGCIIIRNTI- 95 (266)
T ss_pred HHHHHHHHHHhcCC----eEEecCcEEEEEEeCCCceeccc----------cCCCcceeEEEEeeccccCCeEEEeecc-
Confidence 34677777777643 334456889999988 7664211 1245688899999999999988764431
Q ss_pred cccccccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccceeeeeEEEEEecccc
Q 021375 198 KDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAAN 260 (313)
Q Consensus 198 ~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~~ 260 (313)
....-.++|..|.||+-- |.+.....+|++|.-.+++.=+....-+
T Consensus 96 --------~~~kkii~~~~~~aVlLs---------pl~~y~Vs~V~~G~~i~i~l~idIPSmr 141 (266)
T PF06822_consen 96 --------SNDKKIITPNQNMAVLLS---------PLADYDVSNVTKGSMIIIVLDIDIPSMR 141 (266)
T ss_pred --------cCCceEEecCCCeEEEec---------chhheEEEEecCCcEEEEEEEeccCccE
Confidence 223567999999999964 4677888899999988887766655543
No 41
>PLN02276 gibberellin 20-oxidase
Probab=69.13 E-value=32 Score=33.53 Aligned_cols=90 Identities=20% Similarity=0.172 Sum_probs=54.2
Q ss_pred CcceEeeecC-CC------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEec
Q 021375 142 KPVHVMRYGL-DE------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRP 214 (313)
Q Consensus 142 E~lqv~rY~~-~~------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~P 214 (313)
..+++.+|.+ .. -.+|.|+. .+|+|+- | ..||-=+.. ++ .-+.|.|
T Consensus 206 ~~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~Q--d-~v~GLQV~~-----~g-------~Wi~V~p 258 (361)
T PLN02276 206 SIMRCNYYPPCQEPELTLGTGPHCDPT------------SLTILHQ--D-QVGGLQVFV-----DN-------KWRSVRP 258 (361)
T ss_pred ceeeeEeCCCCCCcccccCCccccCCc------------eeEEEEe--c-CCCceEEEE-----CC-------EEEEcCC
Confidence 3577888865 21 33565542 5777754 4 355644442 22 2589999
Q ss_pred ccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 215 VKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 215 kkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
..|..||--. ...|| .-..++|.+-.-...++|++.-+++-...
T Consensus 259 ~pgalVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~P~~d 306 (361)
T PLN02276 259 RPGALVVNIGDTFMALSNG-RYKSCLHRAVVNSERERRSLAFFLCPKED 306 (361)
T ss_pred CCCeEEEEcHHHHHHHhCC-ccccccceeecCCCCCEEEEEEEecCCCC
Confidence 9999888521 11122 34579999754345678998887765443
No 42
>PLN02997 flavonol synthase
Probab=68.35 E-value=17 Score=34.90 Aligned_cols=89 Identities=17% Similarity=0.064 Sum_probs=53.9
Q ss_pred cceEeeecC-CC------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecc
Q 021375 143 PVHVMRYGL-DE------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPV 215 (313)
Q Consensus 143 ~lqv~rY~~-~~------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~Pk 215 (313)
.+++.+|.+ .. ..+|.|+ -.+|+|+. |. .||==+... + .-+.|.|.
T Consensus 184 ~lRl~~YP~~~~~~~~~g~~~HTD~------------g~lTlL~Q--d~-v~GLQV~~~-----g-------~Wi~V~p~ 236 (325)
T PLN02997 184 VLRVNFYPPTQDTELVIGAAAHSDM------------GAIALLIP--NE-VPGLQAFKD-----E-------QWLDLNYI 236 (325)
T ss_pred eeeeecCCCCCCcccccCccCccCC------------CceEEEec--CC-CCCEEEeEC-----C-------cEEECCCC
Confidence 477888977 31 3456554 25778743 32 456334322 2 35889999
Q ss_pred cceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 216 KGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 216 kG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
+|..||--. ...|| .-..++|.+..-...++|++.-+++-...
T Consensus 237 pgalvVNiGD~Le~~TNG-~~kSt~HRVv~~~~~~R~Si~fF~~P~~d 283 (325)
T PLN02997 237 NSAVVVIIGDQLMRMTNG-RFKNVLHRAKTDKERLRISWPVFVAPRAD 283 (325)
T ss_pred CCeEEEEechHHHHHhCC-ccccccceeeCCCCCCEEEEEEEecCCCC
Confidence 998777421 11123 34578999964444568988887766554
No 43
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=67.83 E-value=32 Score=33.26 Aligned_cols=110 Identities=18% Similarity=0.080 Sum_probs=63.3
Q ss_pred HHHHHHHHhhcCCCCC--------CCCcceEeeecC-CC------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCc
Q 021375 124 ARIEEKILTWTFLPKE--------NSKPVHVMRYGL-DE------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGG 188 (313)
Q Consensus 124 ~~i~~Ri~~~tglp~~--------~~E~lqv~rY~~-~~------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GG 188 (313)
.+|.+-++..+|+|.+ ..-.+++.+|.+ .. ..+|.|+. .+|+|+- | ..||
T Consensus 167 ~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YPp~~~~~~~~g~~~HtD~g------------~lTlL~q--d-~v~G 231 (345)
T PLN02750 167 FKLLELISLSLGLPADRLNGYFKDQISFARFNHYPPCPAPHLALGVGRHKDGG------------ALTVLAQ--D-DVGG 231 (345)
T ss_pred HHHHHHHHHHcCCCHHHHHHHhcCcceEEEEEecCCCCCcccccCcCCCCCCC------------eEEEEec--C-CCCc
Confidence 3344444455677642 123578888876 32 34565542 5677633 3 2466
Q ss_pred ccccCCCcccccccccccCcCeeEecccceEEEEe----ccCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 189 ELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFF----TVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 189 eT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~----n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
==++.. +++. -+.|.|..|..||=- ....|| .-..++|.+......++|++.-+++-...
T Consensus 232 LQV~~~---~~g~-------Wi~V~p~pg~~vVNiGD~L~~~Tng-~~~St~HRVv~~~~~~R~Si~~F~~P~~d 295 (345)
T PLN02750 232 LQISRR---SDGE-------WIPVKPIPDAFIINIGNCMQVWTND-LYWSAEHRVVVNSQKERFSIPFFFFPSHY 295 (345)
T ss_pred eEEeec---CCCe-------EEEccCCCCeEEEEhHHHHHHHhCC-eeecccceeccCCCCCEEEEEEeecCCCC
Confidence 444321 1222 488999999877731 011122 33579999975445679999887766544
No 44
>PLN02904 oxidoreductase
Probab=66.56 E-value=37 Score=33.07 Aligned_cols=105 Identities=15% Similarity=0.083 Sum_probs=60.7
Q ss_pred HHHHHHHhhcCCCCC--------CCCcceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcc
Q 021375 125 RIEEKILTWTFLPKE--------NSKPVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGE 189 (313)
Q Consensus 125 ~i~~Ri~~~tglp~~--------~~E~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGe 189 (313)
+|.+-++..+|++.+ ....+++.+|.+ . .-.+|.|+ -.+|+|+- |+ ||=
T Consensus 183 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~p~~~~~~g~~~HtD~------------g~lTlL~q--d~--~GL 246 (357)
T PLN02904 183 QLIEAISESLGLEKNYLQEEIEEGSQVMAVNCYPACPEPEIALGMPPHSDF------------GSLTILLQ--SS--QGL 246 (357)
T ss_pred HHHHHHHHHcCCCHHHHHHHhcCcccEEEeeecCCCCCcccccCCcCccCC------------CceEEEec--CC--Cee
Confidence 344444455677642 223577888876 2 12356654 25788853 53 553
Q ss_pred cccCCCcccccccccccCcCeeEecccceEEEEeccCC-----CCCCCCCCcccccccccceeeeeEEEEEecc
Q 021375 190 LLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVHP-----NAAPDESSSHTRCPVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 190 T~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~-----~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~ 258 (313)
=+... ++ .-+.|.|..|..||- +-. .+..-..++|.+-.....++|++.-+++-..
T Consensus 247 QV~~~----~g-------~Wi~V~p~pgalVVN--iGD~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~ 307 (357)
T PLN02904 247 QIMDC----NK-------NWVCVPYIEGALIVQ--LGDQVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPL 307 (357)
T ss_pred eEEeC----CC-------CEEECCCCCCeEEEE--ccHHHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCC
Confidence 23221 22 258899999988873 211 1123358899985434567899888776543
No 45
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=65.87 E-value=31 Score=33.47 Aligned_cols=107 Identities=18% Similarity=0.155 Sum_probs=62.2
Q ss_pred HHHHHHHhhcCCCCC--------CCCcceEeeecC-CC------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcc
Q 021375 125 RIEEKILTWTFLPKE--------NSKPVHVMRYGL-DE------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGE 189 (313)
Q Consensus 125 ~i~~Ri~~~tglp~~--------~~E~lqv~rY~~-~~------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGe 189 (313)
+|.+-++..+|++.+ ....+++.+|.+ .. -.+|.|+. .+|+|+- | ..||=
T Consensus 172 ~il~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g------------~lTlL~Q--d-~v~GL 236 (348)
T PLN02912 172 TLLEAISESLGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDAN------------LITVLLQ--D-EVSGL 236 (348)
T ss_pred HHHHHHHHHcCCCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCC------------ceEEEEE--C-CCCce
Confidence 334444445677642 223577888877 21 33566542 5777744 4 34564
Q ss_pred cccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 190 LLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 190 T~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
=++.. + +-+.|.|..|..||--. ...|| .-..++|.+-....+++|++.-+++-...
T Consensus 237 QV~~~-----g-------~Wi~V~p~pgalvVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~p~~d 297 (348)
T PLN02912 237 QVFKD-----G-------KWIAVNPIPNTFIVNLGDQMQVISND-KYKSVLHRAVVNTDKERISIPTFYCPSED 297 (348)
T ss_pred EEEEC-----C-------cEEECCCcCCeEEEEcCHHHHHHhCC-EEEcccccccCCCCCCEEEEEEEecCCCC
Confidence 44422 2 35889999998777311 11122 33588999854445679999888876544
No 46
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=64.66 E-value=23 Score=33.77 Aligned_cols=50 Identities=24% Similarity=0.241 Sum_probs=32.5
Q ss_pred CeeEecccceEEEEec-----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 209 SNVLRPVKGNAILFFT-----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 209 ~~~V~PkkG~AllF~n-----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
-+.|.|..|++++-.- ...| ..-..++|.+-....+++|++.-+++-...
T Consensus 201 Wi~V~p~p~~~lvVNvGD~L~~~Tn-g~~~S~~HRVv~~~~~~R~Si~~F~~p~~d 255 (303)
T PLN02403 201 WVPIPPSKNNTIFVNTGDQLEVLSN-GRYKSTLHRVMADKNGSRLSIATFYNPAGD 255 (303)
T ss_pred EEECCCCCCCEEEEEehHHHHHHhC-CeeecccceeecCCCCCEEEEEEEEcCCCC
Confidence 4789999865544321 1112 234588999976666789999888776544
No 47
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=63.37 E-value=59 Score=31.68 Aligned_cols=108 Identities=19% Similarity=0.141 Sum_probs=60.6
Q ss_pred HHHHHHHHhhcCCCCCC--------CCcceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCC-CCC
Q 021375 124 ARIEEKILTWTFLPKEN--------SKPVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNV-TQG 187 (313)
Q Consensus 124 ~~i~~Ri~~~tglp~~~--------~E~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv-~~G 187 (313)
.+|.+-++..+|++.+. ...+++.+|.+ . .-.+|.|+. .+|+|+ .|. ..|
T Consensus 185 ~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g------------~lTlL~--qd~~~v~ 250 (361)
T PLN02758 185 QRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGS------------ALTVLQ--QGKGSCV 250 (361)
T ss_pred HHHHHHHHHHcCCChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCc------------eeEEEE--eCCCCCC
Confidence 34444444556776432 12466777865 2 124566642 577774 343 456
Q ss_pred cccccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEecc
Q 021375 188 GELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 188 GeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~ 258 (313)
|==+.. ++ .-+.|.|..|..||--. ...| ..-..+.|.+......++|++.-+++-..
T Consensus 251 GLQV~~-----~g-------~Wi~V~p~pgalVVNiGD~L~~~SN-G~~kS~~HRVv~~~~~~R~Sia~F~~P~~ 312 (361)
T PLN02758 251 GLQILK-----DN-------TWVPVHPVPNALVINIGDTLEVLTN-GKYKSVEHRAVTNKEKDRLSIVTFYAPSY 312 (361)
T ss_pred Ceeeee-----CC-------EEEeCCCCCCeEEEEccchhhhhcC-CeeecccceeecCCCCCEEEEEEEecCCC
Confidence 633332 22 25889999998877421 1112 23458899986544456888887766443
No 48
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=62.95 E-value=32 Score=33.51 Aligned_cols=50 Identities=14% Similarity=0.113 Sum_probs=33.5
Q ss_pred CeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 209 SNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 209 ~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
-+.|.|..|..||=-. ...|| .-..++|.+-....+++|++.-+++-...
T Consensus 244 Wi~Vpp~pgalVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Si~~F~~P~~d 297 (358)
T PLN02515 244 WITVQPVEGAFVVNLGDHGHYLSNG-RFKNADHQAVVNSNCSRLSIATFQNPAPD 297 (358)
T ss_pred EEECCCCCCeEEEEccHHHHHHhCC-eeeeecceEECCCCCCEEEEEEEecCCCC
Confidence 5889999998777311 11123 34689999765545689999888776544
No 49
>PLN02947 oxidoreductase
Probab=62.26 E-value=46 Score=32.69 Aligned_cols=69 Identities=12% Similarity=0.107 Sum_probs=41.7
Q ss_pred eEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecccceEEEEe----ccCCCCCCCCCCcccccccccceeee
Q 021375 174 MAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFF----TVHPNAAPDESSSHTRCPVLEGEMWS 249 (313)
Q Consensus 174 ~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~----n~~~~g~~D~~slH~gcPV~~G~K~i 249 (313)
.+|+|+. ++ .||-=+.. ++ +-+.|.|..|..||-- ....|| .-..++|.+-......+++
T Consensus 252 ~lTlL~Q-d~--v~GLQV~~-----~g-------~Wi~V~p~pga~VVNvGD~Lq~~SNG-~~kS~~HRVv~~~~~~R~S 315 (374)
T PLN02947 252 FLTLLLQ-DE--VEGLQIMH-----AG-------RWVTVEPIPGSFVVNVGDHLEIFSNG-RYKSVLHRVRVNSTKPRIS 315 (374)
T ss_pred ceEEEEe-cC--CCCeeEeE-----CC-------EEEeCCCCCCeEEEEeCceeeeeeCC-EEeccccccccCCCCCEEE
Confidence 6788865 33 35543433 22 3588999998777731 111123 2357899885444567899
Q ss_pred eEEEEEecc
Q 021375 250 AVKFFQVKA 258 (313)
Q Consensus 250 at~Wi~~~~ 258 (313)
+.-+++-..
T Consensus 316 ia~F~~P~~ 324 (374)
T PLN02947 316 VASLHSLPF 324 (374)
T ss_pred EEEEecCCC
Confidence 888776544
No 50
>PHA02985 hypothetical protein; Provisional
Probab=61.74 E-value=36 Score=31.92 Aligned_cols=108 Identities=12% Similarity=0.152 Sum_probs=74.7
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcc
Q 021375 119 EDDIVARIEEKILTWTFLPKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEE 197 (313)
Q Consensus 119 ~d~vv~~i~~Ri~~~tglp~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~ 197 (313)
..++++.|++++.+ ++-..+.+++..|+. +.|.. ....++..+|+=+..+..||..+--+-.
T Consensus 38 ~~~I~~EI~~~i~E----~V~~~n~i~i~~f~~~~~~~~------------~~~~~~SkilICiqsAkkGG~iIi~~~~- 100 (271)
T PHA02985 38 QKIILDEIEQYIDE----TVLVKNLISIEVFNKKKKYYQ------------NIPSRLSKIIICIQSAKKGGCIIIINNI- 100 (271)
T ss_pred hhHHHHHHHHhcCC----eEEecceeEEEEEcCCcceEe------------eCCCCceeEEEEEeecccCCEEEEeccc-
Confidence 45677788877743 223345688888777 55431 1245778999999999999988753321
Q ss_pred cccccccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccceeeeeEEEEEecccc
Q 021375 198 KDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAAN 260 (313)
Q Consensus 198 ~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~~ 260 (313)
++ ..-.++|..|.||+-- |.+-....||.+|.-.++..=+....-+
T Consensus 101 -------~~-~K~ii~~~~n~aVlLS---------PLs~Y~Vs~V~kGsli~i~l~idIPSmr 146 (271)
T PHA02985 101 -------TN-NKKIITLNINHIIILS---------PLSKYTVSKVSKGSLIIIVLDIDIPSMR 146 (271)
T ss_pred -------cc-CceEEecCCCeEEEec---------chhhceEEEecCCcEEEEEEEecCCceE
Confidence 11 2457999999999964 4678888899999888777666555443
No 51
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=61.10 E-value=46 Score=32.48 Aligned_cols=89 Identities=16% Similarity=0.171 Sum_probs=52.4
Q ss_pred cceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecc
Q 021375 143 PVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPV 215 (313)
Q Consensus 143 ~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~Pk 215 (313)
.+++.+|.+ . ...+|.|+ -.+|+|+. ++ .||==++... + .-+.|.|.
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~------------g~lTiL~Q-d~--v~GLQV~~~~----~-------~Wi~V~p~ 264 (358)
T PLN02254 211 ALQLNSYPVCPDPDRAMGLAPHTDS------------SLLTILYQ-SN--TSGLQVFREG----V-------GWVTVPPV 264 (358)
T ss_pred eEEEecCCCCCCcccccCcCCccCC------------CcEEEEec-CC--CCCceEECCC----C-------EEEEcccC
Confidence 466778876 2 13456554 36788865 33 3564444321 1 25899999
Q ss_pred cceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEecc
Q 021375 216 KGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 216 kG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~ 258 (313)
.|..||--. ...|| .-..++|.+-.-...+++++.-+++-..
T Consensus 265 pgalVVNiGD~lq~~SNg-~~kS~~HRVv~~~~~~R~Sia~F~~P~~ 310 (358)
T PLN02254 265 PGSLVVNVGDLLHILSNG-RFPSVLHRAVVNKTRHRISVAYFYGPPS 310 (358)
T ss_pred CCCEEEEhHHHHHHHhCC-eeccccceeecCCCCCEEEEEEEecCCC
Confidence 998888421 11123 3458899985333456888877665443
No 52
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=59.19 E-value=55 Score=31.48 Aligned_cols=85 Identities=20% Similarity=0.184 Sum_probs=53.4
Q ss_pred cceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecc
Q 021375 143 PVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPV 215 (313)
Q Consensus 143 ~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~Pk 215 (313)
-+++.+|.+ . ...+|.|.. .+|+| |.|...||-=+|. +++ .-+.|+|.
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~~------------~lTiL--lqd~~V~GLQv~~----~dg-------~Wi~V~P~ 231 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDKS------------FLTIL--LQDDDVGGLQVFT----KDG-------KWIDVPPI 231 (322)
T ss_pred EEEEeecCCCcCccccccccCccCcC------------ceEEE--EccCCcCceEEEe----cCC-------eEEECCCC
Confidence 677888877 2 345666642 36666 5554667766664 122 35899999
Q ss_pred cceEEEEeccC------CCCCCCCCCcccccccccceeeeeEEEEE
Q 021375 216 KGNAILFFTVH------PNAAPDESSSHTRCPVLEGEMWSAVKFFQ 255 (313)
Q Consensus 216 kG~AllF~n~~------~~g~~D~~slH~gcPV~~G~K~iat~Wi~ 255 (313)
+|..|+ |+- .|| .-...+|.+......+++++-.++-
T Consensus 232 p~a~vV--NiGD~l~~lSNG-~ykSv~HRV~~n~~~~R~Sia~F~~ 274 (322)
T KOG0143|consen 232 PGAFVV--NIGDMLQILSNG-RYKSVLHRVVVNGEKERISVAFFVF 274 (322)
T ss_pred CCCEEE--EcccHHhHhhCC-cccceEEEEEeCCCCceEEEEEEec
Confidence 975555 321 233 3457899998777777777765443
No 53
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=58.08 E-value=13 Score=23.29 Aligned_cols=22 Identities=9% Similarity=0.241 Sum_probs=14.6
Q ss_pred CchhHHHHHHHHHHHHhhhhcc
Q 021375 1 MASIRFVFLVLAFTSSFVSSSS 22 (313)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (313)
|-++.|.||++..+.++.|..+
T Consensus 1 MEal~Ytfll~~tlgiiFFAIf 22 (31)
T PRK11875 1 MESFAYILILTLALVTLFFAIA 22 (31)
T ss_pred ChhHHHHHHHHHHHHHHHHhhh
Confidence 7789999987655554444433
No 54
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=57.81 E-value=69 Score=31.21 Aligned_cols=90 Identities=20% Similarity=0.090 Sum_probs=52.3
Q ss_pred cceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecc
Q 021375 143 PVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPV 215 (313)
Q Consensus 143 ~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~Pk 215 (313)
.+++.+|.+ . .-.+|.|+. .+|+|+. |...||==+.. ++ .-+.|.|.
T Consensus 214 ~lRl~~YP~~p~~~~~~g~~~HtD~g------------~lTlL~q--~~~v~GLQV~~-----~g-------~W~~V~p~ 267 (362)
T PLN02393 214 CLRVNYYPKCPQPDLTLGLSPHSDPG------------GMTILLP--DDNVAGLQVRR-----DD-------AWITVKPV 267 (362)
T ss_pred eeeeeecCCCCCcccccccccccCCc------------eEEEEee--CCCCCcceeeE-----CC-------EEEECCCC
Confidence 477788855 2 244666653 4577643 33345533332 22 24889999
Q ss_pred cceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 216 KGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 216 kG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
.|..||--. ...| ..-..++|.+..-...++|++.-+++-...
T Consensus 268 pgalVVNiGD~l~~~Tn-g~~kSt~HRVv~~~~~~R~SiafF~~P~~d 314 (362)
T PLN02393 268 PDAFIVNIGDQIQVLSN-AIYKSVEHRVIVNSAKERVSLAFFYNPKSD 314 (362)
T ss_pred CCeEEEEcchhhHhhcC-CeeeccceecccCCCCCEEEEEEEecCCCC
Confidence 998887321 0112 223578999854334578998887766544
No 55
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=57.61 E-value=9.7 Score=30.14 Aligned_cols=20 Identities=35% Similarity=0.439 Sum_probs=13.0
Q ss_pred CchhHHHHHHHHHHHHhhhh
Q 021375 1 MASIRFVFLVLAFTSSFVSS 20 (313)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (313)
|||=.+|||.++|.++++++
T Consensus 1 MaSK~~llL~l~LA~lLlis 20 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLIS 20 (95)
T ss_pred CchhHHHHHHHHHHHHHHHH
Confidence 88877777766655554444
No 56
>COG4340 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.19 E-value=32 Score=30.84 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=29.4
Q ss_pred EEeeecCCC--CCcccccCCCcccccccccccCcCeeEecccceEEEEeccCCCCCCCCCCccccccccc
Q 021375 177 VVLYLSNVT--QGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLE 244 (313)
Q Consensus 177 vLiYLnDv~--~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~ 244 (313)
+.|.+-|=+ .||||-.+..+ -++-+..---..|.+++- -|.+.+|..||+..
T Consensus 148 I~I~~vDR~NI~gGet~lY~~~--------~~~p~f~kvl~pGe~~~l--------~Dh~~~H~~tpi~p 201 (226)
T COG4340 148 IIIMLVDRQNIDGGETDLYAPD--------GASPGFFKVLAPGEAVFL--------DDHRVLHGVTPIVP 201 (226)
T ss_pred EEEEEeeeccccCceEEEEccC--------CCCcceEEeccCCcEEEe--------ccchhcccccceec
Confidence 445555533 69999765542 011122222344555543 26799999999764
No 57
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=55.08 E-value=13 Score=33.24 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=28.9
Q ss_pred cCeeEecccceEEEEeccCCCCCCCCCCccccccc--ccceeeeeEEE
Q 021375 208 TSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPV--LEGEMWSAVKF 253 (313)
Q Consensus 208 ~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV--~~G~K~iat~W 253 (313)
..+.++=++|++|+|.|. +.+|+..+. ..|.+++...|
T Consensus 219 ~~~~~~~~~GDlli~dN~--------~~lHgR~~~~~~~~~R~L~R~~ 258 (258)
T PF02668_consen 219 YTYRHRWQPGDLLIWDNH--------RVLHGRTAFDDPDGDRHLLRVW 258 (258)
T ss_dssp GEEEEE--TTEEEEEETT--------TEEEEE--E-STTSSEEEEEEE
T ss_pred hcccccCCCceEEEEcCC--------eeEecCCCCCCCCCCEEEEEeC
Confidence 357788899999999984 899999998 67888988887
No 58
>PLN02704 flavonol synthase
Probab=54.81 E-value=31 Score=33.15 Aligned_cols=88 Identities=14% Similarity=0.106 Sum_probs=52.4
Q ss_pred ceEeeecC-CC------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEeccc
Q 021375 144 VHVMRYGL-DE------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVK 216 (313)
Q Consensus 144 lqv~rY~~-~~------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~Pkk 216 (313)
+++.+|.+ .. ..+|.|+. .+|+|+- |. .||==+.+ ++ .-+.|.|..
T Consensus 201 lrl~~YP~~~~~~~~~g~~~HtD~g------------~lTlL~q--d~-v~GLQV~~-----~g-------~Wi~V~p~p 253 (335)
T PLN02704 201 LKINYYPPCPRPDLALGVVAHTDMS------------AITILVP--NE-VQGLQVFR-----DD-------HWFDVKYIP 253 (335)
T ss_pred hhhhcCCCCCCcccccCccCccCCc------------ceEEEec--CC-CCceeEeE-----CC-------EEEeCCCCC
Confidence 66778876 21 33566653 5677755 32 45533332 22 258899999
Q ss_pred ceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 217 GNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 217 G~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
|..||--. ...| ..-..++|.+...-..++|++.-+++-...
T Consensus 254 g~lvVNvGD~L~~~TN-g~~kSt~HRVv~~~~~~R~Si~~F~~p~~d 299 (335)
T PLN02704 254 NALVIHIGDQIEILSN-GKYKSVLHRTTVNKEKTRMSWPVFLEPPSE 299 (335)
T ss_pred CeEEEEechHHHHHhC-CeeecccceeecCCCCCeEEEEEEecCCCC
Confidence 98777421 1112 234579999864445678999888776544
No 59
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=52.95 E-value=1.7e+02 Score=26.20 Aligned_cols=97 Identities=18% Similarity=0.116 Sum_probs=60.3
Q ss_pred cccccccccC-CccHHHHHHHHHHHhhcCCCCCCCCcceEeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCC
Q 021375 108 QNSSFRTELN-IEDDIVARIEEKILTWTFLPKENSKPVHVMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVT 185 (313)
Q Consensus 108 ~RtS~~~~l~-~~d~vv~~i~~Ri~~~tglp~~~~E~lqv~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~ 185 (313)
+|.+....+. .-.+..-.+...+...+|.+....|..-|..|.+ ..-.+|.|-.... ...-++++-+=.+..+
T Consensus 71 y~y~~~~p~~~~p~p~l~~~~~~~~~~~g~~~~~~ea~Lvn~Y~pGd~ig~HqD~~e~~-----~~~~v~slSLg~~~~F 145 (194)
T COG3145 71 YRYSLRSPLTGKPWPPLLALFHDLFGAAGYPFEGPEAVLVNRYRPGASIGWHQDKDEED-----DRPPVASLSLGAPCIF 145 (194)
T ss_pred ccccccccCCCCCCCccHHHHHHHHHHhcCCCCChhheeEEeccCCCcccccccccccc-----CCCceEEEecCCCeEE
Confidence 5555555444 1124455666677778899988889999999999 9999999965421 1112344433222222
Q ss_pred C-CcccccCCCcccccccccccCcCeeEecccceEEEEe
Q 021375 186 Q-GGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFF 223 (313)
Q Consensus 186 ~-GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~ 223 (313)
. ||... .+...++.=..|++|++-
T Consensus 146 ~~~~~~r--------------~~~~~~~~L~~Gdvvvm~ 170 (194)
T COG3145 146 RLRGRRR--------------RGPGLRLRLEHGDVVVMG 170 (194)
T ss_pred EeccccC--------------CCCceeEEecCCCEEEec
Confidence 1 22221 113677888999999984
No 60
>CHL00031 psbT photosystem II protein T
Probab=52.12 E-value=18 Score=23.00 Aligned_cols=22 Identities=14% Similarity=0.258 Sum_probs=14.3
Q ss_pred CchhHHHHHHHHHHHHhhhhcc
Q 021375 1 MASIRFVFLVLAFTSSFVSSSS 22 (313)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (313)
|-++.|.||++.-+.++.|..+
T Consensus 1 MEalvYtfll~~tlgilFFAI~ 22 (33)
T CHL00031 1 MEALVYTFLLVSTLGIIFFAIF 22 (33)
T ss_pred CchhHHHHHHHHHHHHHHHhhe
Confidence 7789999987655444444333
No 61
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=50.95 E-value=99 Score=29.85 Aligned_cols=90 Identities=17% Similarity=0.117 Sum_probs=55.0
Q ss_pred cceEeeecC-CC--------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEe
Q 021375 143 PVHVMRYGL-DE--------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLR 213 (313)
Q Consensus 143 ~lqv~rY~~-~~--------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~ 213 (313)
.+++.+|.+ .. -.+|.|+ -.+|+|+- | ..||-=+.. +++. -+.|.
T Consensus 179 ~lRl~~YP~~~~~~~~~~~g~~~HTD~------------g~lTlL~Q--d-~v~GLQV~~----~~g~-------Wi~Vp 232 (335)
T PLN02156 179 CLRMNHYPEKEETPEKVEIGFGEHTDP------------QLISLLRS--N-DTAGLQICV----KDGT-------WVDVP 232 (335)
T ss_pred eEeEEeCCCCCCCccccccCCCCccCC------------CceEEEEe--C-CCCceEEEe----CCCC-------EEEcc
Confidence 588899977 42 1245554 25777754 3 245633332 2232 58899
Q ss_pred cccceEEEEe----ccCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 214 PVKGNAILFF----TVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 214 PkkG~AllF~----n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
|..|..||-- ....|| .-..+.|.+......++|++.-+++-...
T Consensus 233 p~pga~VVNiGD~l~~wTNg-~~kSt~HRVv~~~~~~R~SiafF~~P~~d 281 (335)
T PLN02156 233 PDHSSFFVLVGDTLQVMTNG-RFKSVKHRVVTNTKRSRISMIYFAGPPLS 281 (335)
T ss_pred CCCCcEEEEhHHHHHHHhCC-eeeccceeeecCCCCCEEEEEEeecCCCC
Confidence 9999888742 111222 34689999976556679999887765544
No 62
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=49.62 E-value=53 Score=31.57 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=51.8
Q ss_pred cceEeeecC-CC-------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEec
Q 021375 143 PVHVMRYGL-DE-------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRP 214 (313)
Q Consensus 143 ~lqv~rY~~-~~-------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~P 214 (313)
.+++++|.+ .. ..+|.|+ -.+|+|+- | ..||-=+.......++ .-+.|.|
T Consensus 183 ~lrl~~YP~~~~~~~~~~g~~~HTD~------------g~lTlL~q--d-~v~GLQV~~~~~~~~g-------~Wi~Vpp 240 (332)
T PLN03002 183 TMRLLRYQGISDPSKGIYACGAHSDF------------GMMTLLAT--D-GVMGLQICKDKNAMPQ-------KWEYVPP 240 (332)
T ss_pred heeeeeCCCCCCcccCccccccccCC------------CeEEEEee--C-CCCceEEecCCCCCCC-------cEEECCC
Confidence 467888877 31 2355554 26788843 4 2456444432100011 3578999
Q ss_pred ccceEEEEe----ccCCCCCCCCCCcccccccccceeeeeEEEEEecc
Q 021375 215 VKGNAILFF----TVHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 215 kkG~AllF~----n~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~ 258 (313)
..|..||-- ....|| .-..++|.+.. -..++|++.-+++-..
T Consensus 241 ~pg~~VVNiGD~L~~wTng-~~kSt~HRVv~-~~~~R~Sia~F~~p~~ 286 (332)
T PLN03002 241 IKGAFIVNLGDMLERWSNG-FFKSTLHRVLG-NGQERYSIPFFVEPNH 286 (332)
T ss_pred CCCeEEEEHHHHHHHHhCC-eeECcCCeecC-CCCCeeEEEEEecCCC
Confidence 999888742 111122 23578898853 2457888887766544
No 63
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=47.83 E-value=96 Score=30.15 Aligned_cols=87 Identities=13% Similarity=0.037 Sum_probs=52.6
Q ss_pred cceEeeecC-C------CccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecc
Q 021375 143 PVHVMRYGL-D------EAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPV 215 (313)
Q Consensus 143 ~lqv~rY~~-~------~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~Pk 215 (313)
.+++.+|.+ . ...+|.|+. .+|+|+. | ..||-=+.. ++ .-+.|.|.
T Consensus 212 ~lrl~~YP~~~~~~~~~g~~~HTD~g------------~lTlL~q--d-~v~GLQV~~-----~g-------~Wi~V~p~ 264 (360)
T PLN03178 212 QMKINYYPRCPQPDLALGVEAHTDVS------------ALTFILH--N-MVPGLQVLY-----EG-------KWVTAKCV 264 (360)
T ss_pred hhheeccCCCCCCccccCcCCccCCC------------ceEEEee--C-CCCceeEeE-----CC-------EEEEcCCC
Confidence 467788865 2 234666653 5788743 3 245533332 22 25889999
Q ss_pred cceEEEEeccCC-----CCCCCCCCcccccccccceeeeeEEEEEecc
Q 021375 216 KGNAILFFTVHP-----NAAPDESSSHTRCPVLEGEMWSAVKFFQVKA 258 (313)
Q Consensus 216 kG~AllF~n~~~-----~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~ 258 (313)
.|..||- +-. .+..-..++|.+..--.+++|++.-+++-..
T Consensus 265 pg~lvVN--iGD~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~ 310 (360)
T PLN03178 265 PDSIVVH--IGDTLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPK 310 (360)
T ss_pred CCeEEEE--ccHHHHHHhCCccccccceeecCCCCCeEEEEEEecCCc
Confidence 9987773 221 1223458999974333457999988887654
No 64
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=45.76 E-value=22 Score=21.98 Aligned_cols=21 Identities=14% Similarity=0.336 Sum_probs=12.7
Q ss_pred CchhHHHHHHHHHHHHhhhhc
Q 021375 1 MASIRFVFLVLAFTSSFVSSS 21 (313)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (313)
|-++.|.||++.-+.++.|..
T Consensus 1 MEa~vY~~ll~~tlgilffAI 21 (29)
T PF01405_consen 1 MEALVYTFLLIGTLGILFFAI 21 (29)
T ss_dssp -HHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhhh
Confidence 678999988765444444433
No 65
>PF10014 2OG-Fe_Oxy_2: 2OG-Fe dioxygenase; InterPro: IPR018724 Members of this family of hypothetical bacterial proteins have no known function. Some are described as putative biofilm formation or putative agglutination proteins. ; PDB: 3PL0_B.
Probab=42.83 E-value=41 Score=29.88 Aligned_cols=106 Identities=13% Similarity=0.077 Sum_probs=52.9
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCCCcce----EeeecC-CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccC
Q 021375 119 EDDIVARIEEKILTWTFLPKENSKPVH----VMRYGL-DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFP 193 (313)
Q Consensus 119 ~d~vv~~i~~Ri~~~tglp~~~~E~lq----v~rY~~-~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP 193 (313)
++++++.|...-.++++......++++ -.|+.. .... ---.++. ....|..-+++.||--+++ +||+|.-.
T Consensus 69 ~~~~~~~ll~~~~~~~~~~~~~~~~~~i~vHq~Ri~a~~~~~--g~ptPEG-iH~DG~d~v~~~li~r~Ni-~GG~s~i~ 144 (195)
T PF10014_consen 69 SNPVLQALLRFDAEIFGWDEDSSEPWHIGVHQIRIIATPDEP--GEPTPEG-IHRDGVDFVFIHLINRHNI-EGGESQIY 144 (195)
T ss_dssp TSHHHHHHHHHHHHHHHCCS-GGGEEEEEEEEEEEETTTS----B--STTS-SB--SSSEEEEEEEEEESE-EE--EEEE
T ss_pred cCHHHHHHHHHHHHHhcccccCCCCEEEEEEEEEEEEecCcc--CCcCCCC-ccCCCCCEEEEEEEcCCCc-cCceEEEE
Confidence 467777777777777665532333333 234443 1110 0000000 0124567788899888888 78888643
Q ss_pred CCcccccccccccCcCeeEecccceEEEEeccCCCCCCCCCCccccccccc
Q 021375 194 NSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLE 244 (313)
Q Consensus 194 ~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~ 244 (313)
..+ +. .......-..|+.+++. |...+|.+.||..
T Consensus 145 ~~~-~~-------~~~~~~l~~p~d~l~~~--------D~~~~H~vtpI~~ 179 (195)
T PF10014_consen 145 DND-KE-------ILFFFTLLEPGDTLLVD--------DRRVWHYVTPIRP 179 (195)
T ss_dssp ETT-SS-------EEEEE---STTEEEEEE--------TTTEEEEE--EEE
T ss_pred eCC-CC-------cceEEEecCCCCEEEEe--------CCcceECCCceec
Confidence 221 00 01223334667888874 5799999999975
No 66
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=42.06 E-value=32 Score=31.48 Aligned_cols=40 Identities=15% Similarity=0.309 Sum_probs=32.9
Q ss_pred cCeeEecccceEEEEeccCCCCCCCCCCccccccccc---ceeeeeEEEEE
Q 021375 208 TSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLE---GEMWSAVKFFQ 255 (313)
Q Consensus 208 ~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~---G~K~iat~Wi~ 255 (313)
..+.++=++|++|+|.| .+++|+..+-.. +.+|....|+.
T Consensus 218 ~~~~~~l~~Gdivi~DN--------~r~lHgR~~f~~~~~~~R~L~r~~i~ 260 (262)
T cd00250 218 NQLTVKLEPGDLLIFDN--------RRVLHGRTAFSPRYGGDRWLKGCYVD 260 (262)
T ss_pred hEEEEEcCCCCEEEEec--------hhhhcCCCCCCCCCCCceEEEEEEec
Confidence 35788999999999998 489999988664 56898888875
No 67
>PTZ00273 oxidase reductase; Provisional
Probab=40.36 E-value=99 Score=29.37 Aligned_cols=108 Identities=14% Similarity=0.138 Sum_probs=61.1
Q ss_pred HHHHHHHHhhcCCCCC--------CCCcceEeeecC-CC-------ccccccCCCCCCCCCCCCCeeEEEEeeecCCCCC
Q 021375 124 ARIEEKILTWTFLPKE--------NSKPVHVMRYGL-DE-------AKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQG 187 (313)
Q Consensus 124 ~~i~~Ri~~~tglp~~--------~~E~lqv~rY~~-~~-------y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~G 187 (313)
.+|.+-++..+|+|.+ ..-.+++++|.+ .. -.+|.|+ -.+|+|+ .| ..|
T Consensus 151 ~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~~g~~~HTD~------------g~lTlL~--qd-~~~ 215 (320)
T PTZ00273 151 LVLLRALALAIGLREDFFDSKFMEPLSVFRMKHYPALPQTKKGRTVCGEHTDY------------GIITLLY--QD-SVG 215 (320)
T ss_pred HHHHHHHHHHhCcCHHHHHHhhCCCcceeeeeecCCCCCccccCcccccccCC------------CeEEEEe--cC-CCC
Confidence 3444444455677642 123477888876 21 2355554 2577774 34 245
Q ss_pred cccccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 188 GELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 188 GeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
|==++.. ++ .-+.|.|..|..||--. ...|| .-..++|.+... ..++|++.-+++-...
T Consensus 216 GLqV~~~----~g-------~Wi~V~p~pg~lvVNvGD~l~~~TnG-~~kSt~HRVv~~-~~~R~Si~~F~~p~~d 278 (320)
T PTZ00273 216 GLQVRNL----SG-------EWMDVPPLEGSFVVNIGDMMEMWSNG-RYRSTPHRVVNT-GVERYSMPFFCEPNPN 278 (320)
T ss_pred ceEEECC----CC-------CEEeCCCCCCeEEEEHHHHHHHHHCC-eeeCCCccccCC-CCCeEEEEEEEcCCCC
Confidence 6334332 22 24889999998887421 11223 335799998633 4578888887765543
No 68
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=38.31 E-value=1.2e+02 Score=29.34 Aligned_cols=106 Identities=18% Similarity=0.191 Sum_probs=63.2
Q ss_pred HHHHHHHhhcCCCC--------CCCCcceEeeecC-------CCccccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcc
Q 021375 125 RIEEKILTWTFLPK--------ENSKPVHVMRYGL-------DEAKENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGE 189 (313)
Q Consensus 125 ~i~~Ri~~~tglp~--------~~~E~lqv~rY~~-------~~y~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGe 189 (313)
+|.+-|+.-+++|. +-.+.++++||.. +.-..|.|+. .+|+| --...||-
T Consensus 149 rLL~aiA~~LdL~~d~Fd~~~~d~~~~~RLlrYP~~~~~~~~~~~GaHtD~G------------~lTLl---~Qd~~~GL 213 (322)
T COG3491 149 RLLRAIALGLDLPEDFFDKRTSDPNSVLRLLRYPSRPAREGADGVGAHTDYG------------LLTLL---FQDDVGGL 213 (322)
T ss_pred HHHHHHHHHcCCChhhhhhccCCchheEEEEecCCCcccccccccccccCCC------------eEEEE---EecccCCe
Confidence 44444444456653 2356899999985 2234666653 34444 33446676
Q ss_pred cccCCCcccccccccccCcCeeEecccceEEEEec----cCCCCCCCCCCcccccccccceeeeeEEEEEec
Q 021375 190 LLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFT----VHPNAAPDESSSHTRCPVLEGEMWSAVKFFQVK 257 (313)
Q Consensus 190 T~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n----~~~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~ 257 (313)
-+.+... +-+.|.|..|..|+... ...+ ..-..|.|.++--..=++|++--++..+
T Consensus 214 qv~~~~g-----------~Wl~v~P~pgtlvVNiGdmLe~~Tn-g~lrST~HRV~~~~~~~R~SipfF~~p~ 273 (322)
T COG3491 214 EVRPPNG-----------GWLDVPPIPGTLVVNIGDMLERWTN-GRLRSTVHRVRNPPGVDRYSIPFFLEPN 273 (322)
T ss_pred EEecCCC-----------CeeECCCCCCeEEEeHHHHHHHHhC-CeeccccceeecCCCccceeeeeeccCC
Confidence 6665421 36899999999999742 1112 2346899998855433778776655433
No 69
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=38.02 E-value=90 Score=29.83 Aligned_cols=92 Identities=20% Similarity=0.143 Sum_probs=58.3
Q ss_pred cccccCCCCCCCCCCCCCeeEEEEeeecCCC-CCccccc-CCCccccc--ccc----cccCcCeeEecccceEEEEeccC
Q 021375 155 KENLDYFGNKSALGLSQPLMAAVVLYLSNVT-QGGELLF-PNSEEKDK--MWS----DCAKTSNVLRPVKGNAILFFTVH 226 (313)
Q Consensus 155 ~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~-~GGeT~F-P~~~~~~~--~~~----~c~~~~~~V~PkkG~AllF~n~~ 226 (313)
.+|.|+.... .+..-+..+.+=|-|.. +-|.|.+ |.....+. .++ .-....+-|.=.|||||||..
T Consensus 134 ~~HqD~~~~~----~~~~~lV~~wiAl~d~~~dnGat~vvPgSH~~~~~~~r~d~~~y~~~~~~pv~lekGDallF~~-- 207 (299)
T COG5285 134 RWHQDYPLVS----PGYPALVNAWIALCDFTEDNGATLVVPGSHKWDVIPERPDHETYLERNAVPVELEKGDALLFNG-- 207 (299)
T ss_pred cccccccccc----CCccceEEEEEeccccccccCceEEEecccccccCCCCCCccchhhhcceeeeecCCCEEEEcc--
Confidence 4788854321 34455666888888865 4577755 66542210 011 111235667779999999954
Q ss_pred CCCCCCCCCcccccccccceeeeeEEEEEeccc
Q 021375 227 PNAAPDESSSHTRCPVLEGEMWSAVKFFQVKAA 259 (313)
Q Consensus 227 ~~g~~D~~slH~gcPV~~G~K~iat~Wi~~~~~ 259 (313)
.++|++---..+.+-.|........+
T Consensus 208 -------~L~HaA~aNrT~~~R~A~~~~~~~~~ 233 (299)
T COG5285 208 -------SLWHAAGANRTSADRVALTLQFTVSF 233 (299)
T ss_pred -------hhhhhhhcCCCCcccceEEEEEeecc
Confidence 89999999888877777665555555
No 70
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=37.90 E-value=24 Score=35.17 Aligned_cols=70 Identities=26% Similarity=0.324 Sum_probs=47.5
Q ss_pred CCeeEEEEeeecCCCCCcccccCCCcccccccccccCc--------CeeEecccceEEEEeccCCCCCCCCCCccccccc
Q 021375 171 QPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKT--------SNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPV 242 (313)
Q Consensus 171 ~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~--------~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV 242 (313)
..|-.|+.+||++..+||+..|-... |++. -+...=..|-|++..+ .+.|+..+.
T Consensus 280 ~~~e~~l~v~l~nq~~gG~L~~~~~~--------~~~h~~~~~~~EiFdn~h~p~qa~LHrg---------~~~~~a~~~ 342 (415)
T KOG1971|consen 280 DAREVGLFVCLSNQFEGGELLFTGKY--------CTKHLRTDDLWEIFDNSHDPGQAYLHRG---------YHKHGARAT 342 (415)
T ss_pred chhhcceeEEecccccCCeeEeeccc--------cccccCCCchhhhccCcCCCccceecCc---------chhcccccc
Confidence 56899999999999999999997642 2211 1111112355666655 566777776
Q ss_pred ccceeeeeEEEEEec
Q 021375 243 LEGEMWSAVKFFQVK 257 (313)
Q Consensus 243 ~~G~K~iat~Wi~~~ 257 (313)
+.|.-+.-..|+-..
T Consensus 343 ~~~~~~~nv~~~~~~ 357 (415)
T KOG1971|consen 343 IVGQPCPNVYWFPIS 357 (415)
T ss_pred CCCCCCCceeeehhH
Confidence 777777778888665
No 71
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=37.30 E-value=11 Score=31.13 Aligned_cols=18 Identities=6% Similarity=-0.326 Sum_probs=7.8
Q ss_pred HHHHHHHhhhhccccccc
Q 021375 10 VLAFTSSFVSSSSSSDSG 27 (313)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~ 27 (313)
|+++|++++++++|+..+
T Consensus 4 l~~iii~~i~l~~~~~~~ 21 (130)
T PF12273_consen 4 LFAIIIVAILLFLFLFYC 21 (130)
T ss_pred eHHHHHHHHHHHHHHHHH
Confidence 344444444444444444
No 72
>KOG4459 consensus Membrane-associated proteoglycan Leprecan [Function unknown]
Probab=35.67 E-value=8 Score=38.86 Aligned_cols=76 Identities=24% Similarity=0.323 Sum_probs=58.4
Q ss_pred CCeeEEEEeeecCCCCCcccccCCCcccccccccccCcCeeEecccceEEEEeccCCCCCCCCCCcccccccccceeeee
Q 021375 171 QPLMAAVVLYLSNVTQGGELLFPNSEEKDKMWSDCAKTSNVLRPVKGNAILFFTVHPNAAPDESSSHTRCPVLEGEMWSA 250 (313)
Q Consensus 171 ~~R~~TvLiYLnDv~~GGeT~FP~~~~~~~~~~~c~~~~~~V~PkkG~AllF~n~~~~g~~D~~slH~gcPV~~G~K~ia 250 (313)
+-+....+.|+||+++||+..|...+.+. ....++|+-|+.+-|-+-. .-.|+..+|++|..--+
T Consensus 364 ~~~~~~a~~~~~dd~~~~el~~t~~d~~t--------~~a~~k~~~~re~~~~~g~-------e~~~~~~~~~kg~e~~~ 428 (471)
T KOG4459|consen 364 TELDYFALLYLNDDFEGGELLFTEPDAKT--------YTAISKPECGRECAFSSGA-------ENPHGVKAVTKGLECAV 428 (471)
T ss_pred HHHHhhccHhhcCccccccceecCCcccc--------hhhccccccccchhhhccc-------cCccchhhhhhhhHHhh
Confidence 45678889999999999999985543121 2567889999888886532 45689999999998888
Q ss_pred EEEEEeccccc
Q 021375 251 VKFFQVKAANA 261 (313)
Q Consensus 251 t~Wi~~~~~~~ 261 (313)
.-|....|-..
T Consensus 429 ~lw~~~~~~~r 439 (471)
T KOG4459|consen 429 ALWPTLAPLNR 439 (471)
T ss_pred hcCcccChhhh
Confidence 88988877654
No 73
>PHA03030 hypothetical protein; Provisional
Probab=35.03 E-value=16 Score=29.35 Aligned_cols=23 Identities=22% Similarity=0.137 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhhhhccccccc
Q 021375 5 RFVFLVLAFTSSFVSSSSSSDSG 27 (313)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~ 27 (313)
.|+||+++|.++++|+.+...+.
T Consensus 2 nci~~ili~lfifl~iffYI~~I 24 (122)
T PHA03030 2 NCIFLILIFLFIFLFIFFYIRII 24 (122)
T ss_pred ceehHHHHHHHHHHHHHHHheee
Confidence 46778887777777776665554
No 74
>PF11403 Yeast_MT: Yeast metallothionein; InterPro: IPR022710 Metallothioneins are characterised by an abundance of cysteine residues and a lack of generic secondary structure motifs. This protein functions in primary metal storage, transport and detoxification []. For the first 40 residues in the protein the polypeptide wraps around the metal by forming two large parallel loops separated by a deep cleft containing the metal cluster []. ; PDB: 1AQS_A 1AQR_A 1RJU_V 1FMY_A 1AOO_A 1AQQ_A.
Probab=30.90 E-value=22 Score=22.81 Aligned_cols=8 Identities=50% Similarity=1.203 Sum_probs=4.3
Q ss_pred chhhhhcC
Q 021375 304 GTCRKSCH 311 (313)
Q Consensus 304 ~~C~~sC~ 311 (313)
..|+|||.
T Consensus 18 eqcqkscs 25 (40)
T PF11403_consen 18 EQCQKSCS 25 (40)
T ss_dssp TTSTTS-S
T ss_pred HHHhhcCC
Confidence 55777663
No 75
>PF11395 DUF2873: Protein of unknown function (DUF2873); InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=28.23 E-value=57 Score=21.38 Aligned_cols=13 Identities=15% Similarity=0.220 Sum_probs=7.2
Q ss_pred HHHHHHHHHHhhh
Q 021375 7 VFLVLAFTSSFVS 19 (313)
Q Consensus 7 ~~~~~~~~~~~~~ 19 (313)
++|++|+++++.|
T Consensus 16 ~llflv~imliif 28 (43)
T PF11395_consen 16 FLLFLVIIMLIIF 28 (43)
T ss_pred HHHHHHHHHHHHH
Confidence 4555566665544
No 76
>KOG1231 consensus Proteins containing the FAD binding domain [Energy production and conversion]
Probab=28.06 E-value=2e+02 Score=29.27 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=49.1
Q ss_pred CchhHHHHHHHHHHHHhhhhcccccccchhhcccCCCcceeEEcCC------CCCCcccCCceeEEeecCCcEEEEcCCC
Q 021375 1 MASIRFVFLVLAFTSSFVSSSSSSDSGRKELRNKKGNWESVVQLPH------SINSKRVDPSRVTQISWRPRVFLYRGLL 74 (313)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~P~kve~ls~~P~i~v~~~fL 74 (313)
|||+..+|||.++++...+..+..++.-.....-...++..+..++ +..|-. .--..|.+++++.
T Consensus 1 ~~~~~~lflI~~l~~i~~~~p~~~ks~~~~~~~l~~~~~~~~~~~~~~~a~~s~dFg~-------~~~~~P~aVL~P~-- 71 (505)
T KOG1231|consen 1 MASSLRLFLITLLSIIKLITPVITKSSESLKKILGNSLEGTLESDPSSVAHASTDFGN-------RTQLPPLAVLFPS-- 71 (505)
T ss_pred CchhHHHHHHHHHHHHhcccchhhccCcchhhhcCccccceeeccchhhhhhhhhccc-------cCCCCCeeEEcCC--
Confidence 7899999999999999988888877764444332211222222221 111111 1113677777654
Q ss_pred CHHHHHHHHHHhccC
Q 021375 75 SNEECDHLISLGHGA 89 (313)
Q Consensus 75 s~~EC~~Li~~a~~~ 89 (313)
|.+|...|++.+...
T Consensus 72 S~edVs~ilk~~~~~ 86 (505)
T KOG1231|consen 72 SVEDVSKILKHCNDY 86 (505)
T ss_pred CHHHHHHHHHHHhcc
Confidence 789999999977643
No 77
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=26.66 E-value=1e+02 Score=26.85 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCcceEeeecC-CCccccccC
Q 021375 121 DIVARIEEKILTWTFLPKENSKPVHVMRYGL-DEAKENLDY 160 (313)
Q Consensus 121 ~vv~~i~~Ri~~~tglp~~~~E~lqv~rY~~-~~y~~H~D~ 160 (313)
+.+..|.+++++..|++....+..-|-.|.+ +.-.+|.|.
T Consensus 74 ~~L~~L~~~v~~~~g~~~~~~n~~LvN~Y~~Gd~mg~H~D~ 114 (169)
T TIGR00568 74 QDLGDLCERVATAAGFPDFQPDACLVNRYAPGATLSLHQDR 114 (169)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEEeecCCCcccccccc
Confidence 6788999999999888655667778888999 999999994
No 78
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=25.23 E-value=51 Score=30.68 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=24.7
Q ss_pred cccccCCCCCCCCCCCCCeeEEEEeeecCCCCCcccccCCC
Q 021375 155 KENLDYFGNKSALGLSQPLMAAVVLYLSNVTQGGELLFPNS 195 (313)
Q Consensus 155 ~~H~D~~~~~~~~~~~~~R~~TvLiYLnDv~~GGeT~FP~~ 195 (313)
.+|.|..... ..-.+++|.-+.-+.+||+|.|-+.
T Consensus 95 ~wHtD~sy~~------~pp~~~~L~~~~~p~~GG~T~fad~ 129 (277)
T PRK09553 95 NWHTDVTFIE------TPPLGAILAAKQLPSTGGDTLWASG 129 (277)
T ss_pred CCeecccCee------CCCceeEEEEEecCCCCCccHhhhH
Confidence 4899976543 2234677777777889999999553
No 79
>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []. Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.
Probab=22.93 E-value=1.2e+02 Score=29.94 Aligned_cols=30 Identities=10% Similarity=0.049 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhcccC
Q 021375 6 FVFLVLAFTSSFVSSSSSSDSGRKELRNKK 35 (313)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (313)
+++|.+++++++.+++.|.+---|+|.+.+
T Consensus 305 c~~~~i~~lL~ig~~~gFv~AttKpL~~v~ 334 (387)
T PF12751_consen 305 CIYLSILLLLVIGFAIGFVFATTKPLTDVQ 334 (387)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcCcccccce
Confidence 344555556667777777777777777755
Done!