Query 021382
Match_columns 313
No_of_seqs 127 out of 1697
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 02:31:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021382.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021382hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 2.5E-47 5.5E-52 316.2 23.3 294 2-312 20-320 (322)
2 PLN02824 hydrolase, alpha/beta 100.0 9.7E-39 2.1E-43 276.0 24.6 278 4-311 8-293 (294)
3 PRK00870 haloalkane dehalogena 100.0 3.3E-38 7.3E-43 273.6 25.3 276 3-312 18-301 (302)
4 PRK03592 haloalkane dehalogena 100.0 3.7E-38 8.1E-43 272.4 25.4 267 4-311 7-288 (295)
5 PLN02679 hydrolase, alpha/beta 100.0 2.6E-37 5.6E-42 273.5 24.8 282 6-311 63-356 (360)
6 PRK03204 haloalkane dehalogena 100.0 9.5E-38 2.1E-42 268.2 18.4 274 3-310 13-286 (286)
7 TIGR02240 PHA_depoly_arom poly 100.0 2.9E-37 6.3E-42 264.3 20.8 263 4-311 2-265 (276)
8 PLN02965 Probable pheophorbida 100.0 1.7E-35 3.8E-40 250.4 21.2 242 28-311 4-252 (255)
9 TIGR03343 biphenyl_bphD 2-hydr 100.0 8.4E-35 1.8E-39 249.8 22.9 268 4-310 5-281 (282)
10 PLN03084 alpha/beta hydrolase 100.0 1E-34 2.2E-39 256.2 22.1 122 8-131 109-232 (383)
11 PLN02578 hydrolase 100.0 1.4E-34 3E-39 255.8 22.9 118 7-130 69-186 (354)
12 PLN03087 BODYGUARD 1 domain co 100.0 7.8E-35 1.7E-39 261.7 21.2 126 5-131 177-309 (481)
13 TIGR03056 bchO_mg_che_rel puta 100.0 1.9E-34 4.2E-39 246.8 21.2 270 5-310 7-278 (278)
14 PRK06489 hypothetical protein; 100.0 1.9E-34 4.1E-39 255.6 19.6 119 11-130 47-188 (360)
15 PRK10349 carboxylesterase BioH 100.0 1.5E-34 3.2E-39 244.9 17.7 252 15-311 3-255 (256)
16 PRK10673 acyl-CoA esterase; Pr 100.0 2.9E-33 6.3E-38 236.7 20.6 249 15-311 2-254 (255)
17 PRK11126 2-succinyl-6-hydroxy- 100.0 1E-32 2.2E-37 231.7 22.4 99 27-130 2-101 (242)
18 PRK08775 homoserine O-acetyltr 100.0 6.2E-33 1.3E-37 244.4 19.0 119 6-130 38-172 (343)
19 KOG1454 Predicted hydrolase/ac 100.0 9.3E-33 2E-37 238.7 17.6 254 26-312 57-324 (326)
20 PRK07581 hypothetical protein; 100.0 8.3E-33 1.8E-37 243.5 16.8 121 10-130 22-158 (339)
21 TIGR01250 pro_imino_pep_2 prol 100.0 5.1E-32 1.1E-36 232.2 21.0 123 8-130 6-130 (288)
22 TIGR03611 RutD pyrimidine util 100.0 7.6E-32 1.6E-36 227.5 19.9 253 16-310 1-256 (257)
23 PLN02385 hydrolase; alpha/beta 100.0 4.6E-32 1E-36 239.5 19.3 122 8-130 66-196 (349)
24 PRK10749 lysophospholipase L2; 100.0 2.3E-31 5.1E-36 233.1 23.3 125 6-130 33-165 (330)
25 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.5E-31 3.3E-36 224.3 19.4 250 15-310 1-251 (251)
26 PLN02211 methyl indole-3-aceta 100.0 8.9E-31 1.9E-35 223.1 22.8 262 11-311 4-269 (273)
27 TIGR01392 homoserO_Ac_trn homo 100.0 7E-32 1.5E-36 238.5 16.4 122 10-131 12-162 (351)
28 PRK00175 metX homoserine O-ace 100.0 1.9E-31 4.1E-36 237.6 18.6 122 10-131 29-182 (379)
29 PHA02857 monoglyceride lipase; 100.0 3.5E-30 7.6E-35 220.5 25.4 123 7-130 4-131 (276)
30 TIGR01738 bioH putative pimelo 100.0 2.1E-30 4.6E-35 216.7 18.5 240 28-309 5-245 (245)
31 KOG4409 Predicted hydrolase/ac 100.0 1E-29 2.2E-34 211.9 20.8 123 7-130 68-194 (365)
32 PLN02298 hydrolase, alpha/beta 100.0 4.9E-30 1.1E-34 225.2 19.1 122 8-130 37-168 (330)
33 PF12697 Abhydrolase_6: Alpha/ 100.0 4E-31 8.6E-36 218.3 10.5 101 30-131 1-101 (228)
34 PLN02894 hydrolase, alpha/beta 100.0 3E-29 6.4E-34 224.5 23.3 115 15-130 93-210 (402)
35 TIGR03695 menH_SHCHC 2-succiny 100.0 8.3E-30 1.8E-34 213.5 18.4 247 27-310 1-251 (251)
36 PRK14875 acetoin dehydrogenase 100.0 4.2E-29 9.1E-34 222.8 22.2 258 7-311 112-370 (371)
37 TIGR01249 pro_imino_pep_1 prol 100.0 1.8E-29 3.9E-34 219.1 18.9 126 4-131 4-130 (306)
38 PRK05855 short chain dehydroge 100.0 1E-28 2.3E-33 232.8 24.4 121 6-128 5-128 (582)
39 PLN02980 2-oxoglutarate decarb 100.0 7.5E-29 1.6E-33 252.8 22.9 113 16-129 1360-1478(1655)
40 PLN02652 hydrolase; alpha/beta 100.0 4.2E-27 9.1E-32 209.1 22.4 117 12-130 119-244 (395)
41 COG2267 PldB Lysophospholipase 100.0 2.7E-26 5.8E-31 196.6 22.7 128 5-132 11-143 (298)
42 KOG2984 Predicted hydrolase [G 100.0 2.3E-27 5E-32 182.1 13.9 248 5-312 22-276 (277)
43 PLN02511 hydrolase 99.9 1.2E-26 2.6E-31 206.9 18.4 264 12-311 80-364 (388)
44 PRK06765 homoserine O-acetyltr 99.9 2.2E-26 4.9E-31 203.7 19.6 119 12-130 39-195 (389)
45 KOG2382 Predicted alpha/beta h 99.9 4.6E-26 9.9E-31 189.8 16.0 245 26-311 51-312 (315)
46 TIGR01607 PST-A Plasmodium sub 99.9 7.8E-24 1.7E-28 185.2 19.9 122 9-130 3-184 (332)
47 TIGR03100 hydr1_PEP hydrolase, 99.9 4E-23 8.6E-28 176.3 21.2 117 9-130 7-133 (274)
48 PRK10985 putative hydrolase; P 99.9 1.5E-22 3.2E-27 177.0 21.8 119 12-131 40-168 (324)
49 PRK05077 frsA fermentation/res 99.9 2.2E-22 4.8E-27 180.3 20.8 230 12-312 177-412 (414)
50 KOG1455 Lysophospholipase [Lip 99.9 1.5E-22 3.3E-27 166.2 18.0 121 8-129 31-162 (313)
51 PLN02872 triacylglycerol lipas 99.9 1.9E-22 4.2E-27 178.6 19.9 294 3-311 43-388 (395)
52 KOG2564 Predicted acetyltransf 99.9 3.4E-22 7.3E-27 161.3 16.8 119 9-129 53-180 (343)
53 TIGR01838 PHA_synth_I poly(R)- 99.9 3.5E-22 7.5E-27 181.8 18.9 256 26-300 187-463 (532)
54 COG1647 Esterase/lipase [Gener 99.9 2.2E-22 4.8E-27 157.5 14.8 223 28-311 16-243 (243)
55 COG0596 MhpC Predicted hydrola 99.9 8.7E-21 1.9E-25 159.4 22.0 116 9-130 5-122 (282)
56 PF00561 Abhydrolase_1: alpha/ 99.9 1.3E-23 2.8E-28 174.4 4.7 76 55-130 1-78 (230)
57 PRK11071 esterase YqiA; Provis 99.9 4.7E-21 1E-25 154.1 16.6 87 28-130 2-92 (190)
58 PRK10566 esterase; Provisional 99.9 1.8E-20 3.9E-25 158.0 19.5 101 26-128 26-139 (249)
59 TIGR01836 PHA_synth_III_C poly 99.9 1.3E-20 2.8E-25 166.6 17.8 116 12-132 46-172 (350)
60 PRK07868 acyl-CoA synthetase; 99.8 3.8E-20 8.3E-25 183.3 17.8 103 26-131 66-177 (994)
61 TIGR03101 hydr2_PEP hydrolase, 99.8 7.4E-20 1.6E-24 153.5 15.7 122 7-130 3-133 (266)
62 PRK13604 luxD acyl transferase 99.8 7.1E-19 1.5E-23 148.5 18.8 118 8-129 13-139 (307)
63 KOG2565 Predicted hydrolases o 99.8 1.8E-19 3.9E-24 150.9 13.1 126 4-130 124-263 (469)
64 KOG2931 Differentiation-relate 99.8 3.8E-16 8.2E-21 127.6 21.5 270 7-311 25-305 (326)
65 PF12695 Abhydrolase_5: Alpha/ 99.7 1.9E-17 4.1E-22 127.6 12.4 93 29-129 1-93 (145)
66 PF03096 Ndr: Ndr family; Int 99.7 8.1E-17 1.7E-21 133.4 15.0 267 7-311 2-278 (283)
67 TIGR02821 fghA_ester_D S-formy 99.7 5.5E-16 1.2E-20 132.4 20.5 119 12-130 23-172 (275)
68 TIGR03230 lipo_lipase lipoprot 99.7 8.6E-17 1.9E-21 142.8 13.4 103 26-130 40-153 (442)
69 PRK11460 putative hydrolase; P 99.7 5.1E-16 1.1E-20 129.0 17.1 179 25-310 14-210 (232)
70 COG2021 MET2 Homoserine acetyl 99.7 6.7E-16 1.5E-20 131.0 17.6 120 11-130 33-181 (368)
71 PLN02442 S-formylglutathione h 99.7 4.2E-15 9E-20 127.3 19.5 105 26-130 46-177 (283)
72 PLN00021 chlorophyllase 99.7 6E-15 1.3E-19 127.2 19.1 101 26-128 51-163 (313)
73 cd00707 Pancreat_lipase_like P 99.6 5.6E-16 1.2E-20 131.7 9.4 103 26-130 35-146 (275)
74 COG1506 DAP2 Dipeptidyl aminop 99.6 1.6E-14 3.6E-19 136.3 17.4 226 12-312 374-616 (620)
75 PF06342 DUF1057: Alpha/beta h 99.6 1.1E-14 2.3E-19 119.4 13.6 112 16-130 23-136 (297)
76 TIGR03502 lipase_Pla1_cef extr 99.6 3.9E-15 8.5E-20 140.0 12.6 110 8-117 422-576 (792)
77 COG3208 GrsT Predicted thioest 99.6 3.4E-14 7.4E-19 114.3 14.9 223 27-310 7-234 (244)
78 PF12146 Hydrolase_4: Putative 99.6 1E-14 2.3E-19 99.0 9.2 78 13-91 1-79 (79)
79 KOG4667 Predicted esterase [Li 99.6 1.4E-13 3.1E-18 107.6 16.5 98 27-127 33-135 (269)
80 COG0429 Predicted hydrolase of 99.6 1.9E-13 4E-18 114.5 17.8 102 25-128 73-182 (345)
81 KOG1552 Predicted alpha/beta h 99.6 2.6E-13 5.6E-18 109.9 18.0 96 27-129 60-161 (258)
82 PF00326 Peptidase_S9: Prolyl 99.6 7.9E-15 1.7E-19 120.6 9.3 196 45-312 5-209 (213)
83 PF02230 Abhydrolase_2: Phosph 99.5 2.2E-13 4.7E-18 112.2 14.0 181 25-311 12-214 (216)
84 KOG4391 Predicted alpha/beta h 99.5 9.8E-14 2.1E-18 108.6 10.9 122 3-129 51-182 (300)
85 TIGR01839 PHA_synth_II poly(R) 99.5 6.4E-13 1.4E-17 120.4 17.6 102 26-132 214-329 (560)
86 TIGR01840 esterase_phb esteras 99.5 4E-13 8.6E-18 110.4 12.5 104 26-129 12-128 (212)
87 KOG1838 Alpha/beta hydrolase [ 99.5 9.3E-12 2E-16 108.1 21.3 247 26-310 124-386 (409)
88 TIGR00976 /NonD putative hydro 99.5 2.5E-13 5.4E-18 127.0 10.4 116 11-129 4-130 (550)
89 PRK10162 acetyl esterase; Prov 99.4 4E-11 8.7E-16 104.5 22.2 102 26-129 80-193 (318)
90 PF01738 DLH: Dienelactone hyd 99.4 2.3E-12 5.1E-17 106.3 12.3 101 26-127 13-128 (218)
91 PF05448 AXE1: Acetyl xylan es 99.4 4.1E-11 8.9E-16 103.7 17.7 116 11-128 64-206 (320)
92 PF06500 DUF1100: Alpha/beta h 99.3 1.3E-10 2.8E-15 101.7 17.7 121 9-131 170-296 (411)
93 COG0400 Predicted esterase [Ge 99.3 4.7E-11 1E-15 96.1 13.3 101 23-128 14-131 (207)
94 COG0412 Dienelactone hydrolase 99.3 3.6E-10 7.8E-15 93.8 18.3 117 9-126 7-141 (236)
95 TIGR01849 PHB_depoly_PhaZ poly 99.3 6.3E-10 1.4E-14 98.3 19.9 102 28-133 103-210 (406)
96 PF07819 PGAP1: PGAP1-like pro 99.3 4E-11 8.6E-16 98.8 11.4 102 26-132 3-124 (225)
97 PLN02733 phosphatidylcholine-s 99.3 4E-11 8.7E-16 107.5 11.5 123 7-133 71-203 (440)
98 PF05728 UPF0227: Uncharacteri 99.2 1.4E-09 3E-14 86.5 18.1 86 30-131 2-91 (187)
99 PF06821 Ser_hydrolase: Serine 99.2 1.3E-10 2.9E-15 91.4 11.8 88 30-130 1-90 (171)
100 PF00975 Thioesterase: Thioest 99.2 1E-10 2.2E-15 97.2 11.4 98 28-130 1-103 (229)
101 PRK10252 entF enterobactin syn 99.2 9E-11 2E-15 120.9 11.6 98 27-129 1068-1169(1296)
102 COG2945 Predicted hydrolase of 99.1 5.3E-09 1.1E-13 81.0 15.8 111 4-119 4-126 (210)
103 PF02273 Acyl_transf_2: Acyl t 99.1 4.8E-09 1.1E-13 84.2 15.5 116 8-127 6-130 (294)
104 PRK10115 protease 2; Provision 99.1 6.7E-09 1.4E-13 99.2 18.5 118 11-128 424-556 (686)
105 PF10230 DUF2305: Uncharacteri 99.1 1.8E-09 3.9E-14 91.4 12.8 103 27-129 2-120 (266)
106 COG3571 Predicted hydrolase of 99.1 8.4E-09 1.8E-13 77.4 14.0 103 28-131 15-124 (213)
107 COG3243 PhaC Poly(3-hydroxyalk 99.0 1.4E-09 3.1E-14 94.1 9.1 106 27-132 107-218 (445)
108 PF09752 DUF2048: Uncharacteri 99.0 1.3E-07 2.8E-12 81.0 19.0 242 26-311 91-348 (348)
109 PF12740 Chlorophyllase2: Chlo 99.0 3.8E-09 8.2E-14 87.3 8.8 101 27-129 17-129 (259)
110 COG4757 Predicted alpha/beta h 98.9 1.1E-08 2.5E-13 81.4 10.9 115 12-128 14-135 (281)
111 PF06028 DUF915: Alpha/beta hy 98.9 1.1E-08 2.4E-13 85.3 10.6 106 27-132 11-144 (255)
112 PF01674 Lipase_2: Lipase (cla 98.9 1E-09 2.2E-14 89.2 4.3 88 28-116 2-95 (219)
113 PF08538 DUF1749: Protein of u 98.9 3.5E-08 7.5E-13 83.2 12.4 96 27-131 33-148 (303)
114 COG3458 Acetyl esterase (deace 98.9 2.5E-08 5.5E-13 81.3 11.0 115 11-127 64-206 (321)
115 COG3319 Thioesterase domains o 98.9 2.7E-08 5.8E-13 82.8 11.0 100 28-132 1-104 (257)
116 KOG2624 Triglyceride lipase-ch 98.9 2.5E-07 5.4E-12 81.8 17.3 128 4-131 48-199 (403)
117 PTZ00472 serine carboxypeptida 98.9 2.2E-08 4.7E-13 91.3 11.0 123 7-129 50-214 (462)
118 PRK05371 x-prolyl-dipeptidyl a 98.8 2.5E-07 5.5E-12 89.2 17.9 80 47-129 272-371 (767)
119 PRK04940 hypothetical protein; 98.8 1.9E-07 4.1E-12 73.0 13.1 85 30-131 2-92 (180)
120 PF03959 FSH1: Serine hydrolas 98.8 2.8E-08 6.1E-13 81.4 8.4 90 27-117 4-123 (212)
121 PF07224 Chlorophyllase: Chlor 98.8 3.4E-08 7.3E-13 80.3 7.9 98 28-128 47-154 (307)
122 PF10503 Esterase_phd: Esteras 98.7 2E-07 4.4E-12 76.0 12.3 103 27-129 16-130 (220)
123 PF00151 Lipase: Lipase; Inte 98.7 1.9E-08 4.1E-13 87.5 4.7 103 26-130 70-186 (331)
124 smart00824 PKS_TE Thioesterase 98.7 2E-07 4.4E-12 75.8 10.7 93 32-129 2-100 (212)
125 PF12715 Abhydrolase_7: Abhydr 98.7 1.6E-07 3.5E-12 81.3 9.9 101 27-128 115-257 (390)
126 PF02129 Peptidase_S15: X-Pro 98.7 1.6E-07 3.5E-12 80.2 9.5 115 12-129 1-134 (272)
127 PF05057 DUF676: Putative seri 98.6 1.7E-07 3.8E-12 77.0 8.6 89 27-115 4-97 (217)
128 COG1075 LipA Predicted acetylt 98.6 1.3E-07 2.8E-12 82.9 7.8 100 28-131 60-164 (336)
129 PF08840 BAAT_C: BAAT / Acyl-C 98.6 1.3E-07 2.7E-12 77.5 6.1 48 82-130 5-55 (213)
130 PF05990 DUF900: Alpha/beta hy 98.5 4.1E-07 9E-12 75.4 8.9 104 26-130 17-136 (233)
131 KOG4627 Kynurenine formamidase 98.5 1.8E-06 4E-11 67.7 11.0 104 18-129 58-170 (270)
132 PF03403 PAF-AH_p_II: Platelet 98.5 2.7E-07 5.9E-12 81.9 6.4 103 27-130 100-261 (379)
133 PF11339 DUF3141: Protein of u 98.5 9.6E-05 2.1E-09 66.3 21.8 78 46-131 93-175 (581)
134 PF07859 Abhydrolase_3: alpha/ 98.4 1.2E-06 2.6E-11 71.7 8.7 91 30-129 1-108 (211)
135 KOG2112 Lysophospholipase [Lip 98.4 3.8E-06 8.2E-11 66.5 10.8 98 27-125 3-122 (206)
136 KOG2100 Dipeptidyl aminopeptid 98.4 1.5E-05 3.3E-10 76.9 17.1 123 5-129 499-642 (755)
137 COG3509 LpqC Poly(3-hydroxybut 98.4 4.8E-06 1E-10 69.3 11.8 123 7-129 38-177 (312)
138 KOG3043 Predicted hydrolase re 98.4 2.8E-06 6.1E-11 67.7 9.0 114 8-125 22-148 (242)
139 PF05677 DUF818: Chlamydia CHL 98.4 1E-05 2.2E-10 68.9 12.9 105 8-117 116-236 (365)
140 COG4814 Uncharacterized protei 98.4 3E-06 6.6E-11 68.7 9.2 104 28-131 46-176 (288)
141 PF06057 VirJ: Bacterial virul 98.4 1.5E-05 3.2E-10 62.7 12.5 94 29-129 4-105 (192)
142 PF00756 Esterase: Putative es 98.3 3.3E-06 7.1E-11 71.1 8.9 104 27-130 24-149 (251)
143 COG0657 Aes Esterase/lipase [L 98.3 0.00023 5E-09 62.0 20.1 99 26-129 78-189 (312)
144 KOG2551 Phospholipase/carboxyh 98.3 5.8E-05 1.3E-09 60.3 14.4 58 244-310 161-218 (230)
145 COG4188 Predicted dienelactone 98.2 2.9E-06 6.3E-11 73.1 7.1 93 27-119 71-182 (365)
146 KOG1515 Arylacetamide deacetyl 98.2 0.00055 1.2E-08 59.6 20.8 100 26-130 89-206 (336)
147 KOG3975 Uncharacterized conser 98.2 5E-05 1.1E-09 61.6 13.1 125 4-128 1-144 (301)
148 PF05577 Peptidase_S28: Serine 98.1 9.6E-05 2.1E-09 67.5 14.3 105 27-132 29-149 (434)
149 COG3545 Predicted esterase of 98.1 3.4E-05 7.4E-10 59.4 9.2 90 28-130 3-93 (181)
150 PRK10439 enterobactin/ferric e 98.1 3.4E-05 7.3E-10 69.5 10.8 103 26-130 208-322 (411)
151 PF03583 LIP: Secretory lipase 98.1 4.5E-05 9.7E-10 65.5 10.6 71 46-116 18-91 (290)
152 PF06441 EHN: Epoxide hydrolas 98.0 1.4E-05 3.1E-10 57.8 5.8 44 4-47 68-112 (112)
153 KOG1553 Predicted alpha/beta h 98.0 2E-05 4.3E-10 66.8 7.4 96 28-128 244-342 (517)
154 COG4099 Predicted peptidase [G 98.0 6.9E-05 1.5E-09 62.4 10.4 114 12-129 170-302 (387)
155 PF02450 LCAT: Lecithin:choles 98.0 4.8E-05 1E-09 68.2 10.0 82 42-133 66-162 (389)
156 KOG3724 Negative regulator of 97.9 0.00011 2.4E-09 68.8 11.2 108 12-125 66-210 (973)
157 KOG2281 Dipeptidyl aminopeptid 97.9 3E-05 6.6E-10 70.8 7.1 99 27-125 642-756 (867)
158 COG3150 Predicted esterase [Ge 97.9 6E-05 1.3E-09 57.4 6.8 89 30-130 2-90 (191)
159 COG4782 Uncharacterized protei 97.8 0.00011 2.5E-09 63.0 9.0 102 26-128 115-231 (377)
160 PF00450 Peptidase_S10: Serine 97.8 0.00035 7.7E-09 63.4 11.5 122 7-129 14-179 (415)
161 PLN02606 palmitoyl-protein thi 97.7 0.0002 4.3E-09 60.7 8.4 98 27-130 26-131 (306)
162 PF12048 DUF3530: Protein of u 97.7 0.0027 5.9E-08 55.1 15.7 122 7-129 65-227 (310)
163 PF08386 Abhydrolase_4: TAP-li 97.7 8.3E-05 1.8E-09 53.3 4.9 60 246-311 34-93 (103)
164 KOG2183 Prolylcarboxypeptidase 97.6 0.00036 7.8E-09 60.8 9.0 103 28-130 81-201 (492)
165 cd00312 Esterase_lipase Estera 97.6 0.00026 5.6E-09 65.9 8.4 103 26-130 94-212 (493)
166 PF10142 PhoPQ_related: PhoPQ- 97.6 0.002 4.4E-08 56.7 12.7 47 83-130 156-205 (367)
167 COG2936 Predicted acyl esteras 97.5 0.0004 8.7E-09 63.8 8.6 115 12-128 28-156 (563)
168 PF02089 Palm_thioest: Palmito 97.5 0.00012 2.6E-09 61.4 4.7 103 27-130 5-115 (279)
169 PF05705 DUF829: Eukaryotic pr 97.5 0.0065 1.4E-07 50.8 15.1 64 244-309 176-240 (240)
170 KOG1551 Uncharacterized conser 97.5 0.0053 1.1E-07 50.6 13.6 56 249-311 309-365 (371)
171 cd00741 Lipase Lipase. Lipase 97.5 0.00035 7.6E-09 54.0 6.8 51 80-130 8-66 (153)
172 PLN02633 palmitoyl protein thi 97.4 0.001 2.2E-08 56.5 9.2 98 27-130 25-130 (314)
173 KOG2369 Lecithin:cholesterol a 97.4 0.00018 3.9E-09 63.9 4.7 88 41-131 124-225 (473)
174 PF01764 Lipase_3: Lipase (cla 97.4 0.00055 1.2E-08 51.9 6.9 40 79-118 47-86 (140)
175 KOG2182 Hydrolytic enzymes of 97.4 0.0016 3.5E-08 58.3 9.8 106 26-131 85-207 (514)
176 COG0627 Predicted esterase [Ge 97.4 0.00078 1.7E-08 58.2 7.7 104 27-130 54-186 (316)
177 PLN02517 phosphatidylcholine-s 97.3 0.00083 1.8E-08 61.8 7.5 89 42-132 157-264 (642)
178 KOG3253 Predicted alpha/beta h 97.2 0.0015 3.3E-08 59.6 7.9 93 27-128 176-283 (784)
179 PLN02209 serine carboxypeptida 97.2 0.0047 1E-07 56.1 11.1 123 7-129 42-210 (437)
180 PF04083 Abhydro_lipase: Parti 97.2 0.00088 1.9E-08 43.0 4.6 41 4-44 12-60 (63)
181 PLN03016 sinapoylglucose-malat 97.2 0.0028 6.2E-08 57.5 9.5 123 6-129 39-208 (433)
182 PF10340 DUF2424: Protein of u 97.1 0.0069 1.5E-07 53.3 11.3 117 12-129 104-233 (374)
183 KOG3847 Phospholipase A2 (plat 97.1 0.00055 1.2E-08 57.6 4.0 40 28-67 119-158 (399)
184 KOG2541 Palmitoyl protein thio 97.1 0.0045 9.9E-08 51.1 9.2 96 28-130 24-127 (296)
185 COG2939 Carboxypeptidase C (ca 97.0 0.004 8.8E-08 56.1 8.6 90 26-116 100-218 (498)
186 KOG3967 Uncharacterized conser 96.8 0.01 2.2E-07 47.3 8.6 103 28-130 102-226 (297)
187 COG2819 Predicted hydrolase of 96.8 0.0075 1.6E-07 50.2 8.0 47 84-130 122-171 (264)
188 KOG3101 Esterase D [General fu 96.8 0.0018 3.9E-08 51.5 4.0 102 27-128 44-173 (283)
189 cd00519 Lipase_3 Lipase (class 96.7 0.0042 9.1E-08 51.5 6.4 24 94-117 126-149 (229)
190 COG2272 PnbA Carboxylesterase 96.6 0.023 5.1E-07 51.3 10.3 115 12-129 78-215 (491)
191 PLN02162 triacylglycerol lipas 96.6 0.0061 1.3E-07 54.8 6.6 56 77-132 259-322 (475)
192 PTZ00472 serine carboxypeptida 96.5 0.0033 7.1E-08 57.7 4.8 66 246-311 364-458 (462)
193 PF11187 DUF2974: Protein of u 96.5 0.0087 1.9E-07 49.3 6.5 47 83-130 72-122 (224)
194 PLN00413 triacylglycerol lipas 96.4 0.011 2.3E-07 53.4 6.9 54 79-132 267-328 (479)
195 PF06259 Abhydrolase_8: Alpha/ 96.3 0.01 2.3E-07 46.7 5.8 51 80-130 88-143 (177)
196 PF05576 Peptidase_S37: PS-10 96.2 0.0086 1.9E-07 52.7 5.1 112 15-130 53-168 (448)
197 PLN02571 triacylglycerol lipas 96.0 0.011 2.4E-07 52.7 5.1 37 80-116 208-246 (413)
198 PLN02454 triacylglycerol lipas 96.0 0.012 2.7E-07 52.3 5.4 35 82-116 212-248 (414)
199 PF00135 COesterase: Carboxyle 96.0 0.034 7.4E-07 52.2 8.8 102 27-129 125-243 (535)
200 KOG4372 Predicted alpha/beta h 95.8 0.013 2.8E-07 51.5 4.6 86 27-113 80-167 (405)
201 PF01083 Cutinase: Cutinase; 95.8 0.034 7.4E-07 44.1 6.7 52 79-130 64-121 (179)
202 KOG1282 Serine carboxypeptidas 95.8 0.067 1.4E-06 48.6 9.2 108 7-115 47-187 (454)
203 PLN02408 phospholipase A1 95.8 0.018 3.8E-07 50.6 5.1 37 81-117 183-221 (365)
204 PF00450 Peptidase_S10: Serine 95.7 0.008 1.7E-07 54.5 3.1 65 246-310 330-414 (415)
205 COG3946 VirJ Type IV secretory 95.7 0.048 1.1E-06 47.9 7.3 84 29-119 262-349 (456)
206 PLN02310 triacylglycerol lipas 95.6 0.036 7.8E-07 49.3 6.4 37 80-116 189-229 (405)
207 PLN02934 triacylglycerol lipas 95.5 0.026 5.6E-07 51.4 5.3 37 79-115 304-340 (515)
208 PF07082 DUF1350: Protein of u 95.4 0.044 9.5E-07 45.2 6.0 97 29-128 19-122 (250)
209 KOG4840 Predicted hydrolases o 95.4 0.13 2.8E-06 41.6 8.1 98 27-129 36-142 (299)
210 PF05277 DUF726: Protein of un 95.3 0.045 9.6E-07 47.9 5.9 39 94-132 218-261 (345)
211 PLN02213 sinapoylglucose-malat 95.3 0.066 1.4E-06 46.8 7.0 65 246-311 233-316 (319)
212 PLN02213 sinapoylglucose-malat 95.2 0.045 9.8E-07 47.8 5.9 60 55-115 2-70 (319)
213 PLN02324 triacylglycerol lipas 95.2 0.035 7.5E-07 49.5 5.1 36 81-116 198-235 (415)
214 PLN02802 triacylglycerol lipas 95.1 0.039 8.4E-07 50.3 5.2 37 81-117 313-351 (509)
215 PLN02753 triacylglycerol lipas 94.9 0.047 1E-06 49.9 5.2 36 81-116 292-332 (531)
216 PLN03037 lipase class 3 family 94.8 0.054 1.2E-06 49.5 5.1 36 81-116 299-338 (525)
217 PLN02209 serine carboxypeptida 94.7 0.066 1.4E-06 48.8 5.6 65 246-311 351-434 (437)
218 PLN02719 triacylglycerol lipas 94.5 0.067 1.4E-06 48.8 5.2 36 81-116 278-318 (518)
219 PLN02761 lipase class 3 family 94.4 0.072 1.6E-06 48.7 5.2 36 81-116 273-314 (527)
220 PLN03016 sinapoylglucose-malat 94.4 0.1 2.2E-06 47.6 6.1 65 246-311 347-430 (433)
221 PF04301 DUF452: Protein of un 94.3 0.25 5.4E-06 40.2 7.5 76 27-128 11-87 (213)
222 PLN02847 triacylglycerol lipas 93.8 0.12 2.7E-06 48.0 5.4 21 96-116 251-271 (633)
223 KOG1283 Serine carboxypeptidas 93.6 0.27 5.8E-06 42.1 6.6 97 26-122 30-148 (414)
224 KOG4569 Predicted lipase [Lipi 93.4 0.15 3.3E-06 44.8 5.1 37 80-116 155-191 (336)
225 KOG1282 Serine carboxypeptidas 93.2 0.16 3.5E-06 46.1 5.1 65 247-311 364-447 (454)
226 COG1505 Serine proteases of th 93.1 1.3 2.9E-05 41.3 10.7 115 12-126 403-530 (648)
227 PF11144 DUF2920: Protein of u 92.5 0.29 6.2E-06 43.6 5.5 30 97-126 185-214 (403)
228 PF11288 DUF3089: Protein of u 92.4 0.36 7.9E-06 39.0 5.6 64 54-117 45-116 (207)
229 KOG1202 Animal-type fatty acid 92.1 0.87 1.9E-05 45.9 8.5 93 26-129 2122-2217(2376)
230 COG1073 Hydrolases of the alph 92.0 0.3 6.6E-06 41.5 5.2 65 244-312 229-297 (299)
231 COG2382 Fes Enterochelin ester 91.3 0.17 3.6E-06 43.0 2.6 100 26-129 97-210 (299)
232 KOG1516 Carboxylesterase and r 90.7 1.1 2.3E-05 42.4 7.8 102 27-128 112-229 (545)
233 PF09949 DUF2183: Uncharacteri 89.9 5.3 0.00012 28.2 9.0 82 42-126 12-97 (100)
234 COG1770 PtrB Protease II [Amin 88.6 1.9 4E-05 40.8 7.3 102 27-128 448-559 (682)
235 KOG2029 Uncharacterized conser 88.3 0.89 1.9E-05 42.3 5.0 51 80-130 504-571 (697)
236 KOG2237 Predicted serine prote 87.7 0.56 1.2E-05 43.9 3.4 101 27-127 470-580 (712)
237 PF08237 PE-PPE: PE-PPE domain 87.0 7.1 0.00015 32.2 9.2 54 78-131 28-89 (225)
238 PRK11613 folP dihydropteroate 85.7 5.4 0.00012 34.1 8.0 77 27-112 133-227 (282)
239 KOG4540 Putative lipase essent 83.2 2 4.4E-05 36.2 4.3 31 88-118 268-298 (425)
240 COG5153 CVT17 Putative lipase 83.2 2 4.4E-05 36.2 4.3 31 88-118 268-298 (425)
241 COG4287 PqaA PhoPQ-activated p 83.1 6.8 0.00015 34.5 7.5 58 244-310 327-385 (507)
242 PRK10279 hypothetical protein; 80.3 1.5 3.3E-05 37.9 2.8 37 86-122 23-59 (300)
243 COG4947 Uncharacterized protei 80.3 1 2.2E-05 35.0 1.5 43 89-131 94-136 (227)
244 PF07519 Tannase: Tannase and 80.3 3.5 7.6E-05 38.2 5.2 80 48-129 54-148 (474)
245 TIGR03712 acc_sec_asp2 accesso 79.6 12 0.00025 34.5 8.0 106 7-117 269-378 (511)
246 cd01714 ETF_beta The electron 79.6 11 0.00023 30.6 7.4 60 56-125 79-143 (202)
247 PF00698 Acyl_transf_1: Acyl t 79.0 1.7 3.6E-05 38.0 2.7 30 86-115 74-103 (318)
248 COG1752 RssA Predicted esteras 78.3 2.9 6.4E-05 36.3 4.0 33 86-118 29-61 (306)
249 smart00827 PKS_AT Acyl transfe 77.9 2.9 6.3E-05 36.0 3.8 31 86-116 72-102 (298)
250 cd07225 Pat_PNPLA6_PNPLA7 Pata 77.8 3.3 7.1E-05 36.0 4.1 32 86-117 33-64 (306)
251 PF07519 Tannase: Tannase and 77.2 4.1 9E-05 37.7 4.8 63 247-311 354-426 (474)
252 COG1073 Hydrolases of the alph 76.1 4.6 0.0001 34.1 4.6 100 27-128 49-166 (299)
253 cd07227 Pat_Fungal_NTE1 Fungal 75.7 4.3 9.2E-05 34.5 4.1 32 86-117 28-59 (269)
254 TIGR03131 malonate_mdcH malona 74.3 4.2 9.1E-05 35.0 3.8 30 86-115 66-95 (295)
255 cd07210 Pat_hypo_W_succinogene 73.6 5.8 0.00013 32.6 4.3 31 87-117 19-49 (221)
256 TIGR00128 fabD malonyl CoA-acy 73.6 4.1 8.9E-05 34.8 3.6 30 87-116 73-103 (290)
257 PRK12467 peptide synthase; Pro 73.5 15 0.00032 43.7 8.8 84 28-116 3693-3777(3956)
258 PF03610 EIIA-man: PTS system 73.5 31 0.00067 24.9 7.8 75 29-116 2-77 (116)
259 cd07198 Patatin Patatin-like p 72.5 5.5 0.00012 31.2 3.8 33 86-118 16-48 (172)
260 cd07207 Pat_ExoU_VipD_like Exo 71.1 6.6 0.00014 31.3 4.1 32 86-117 17-48 (194)
261 PF07859 Abhydrolase_3: alpha/ 70.8 2.3 5.1E-05 34.3 1.4 44 247-294 167-210 (211)
262 COG4188 Predicted dienelactone 70.1 4.3 9.4E-05 35.8 2.9 54 243-301 248-303 (365)
263 KOG2385 Uncharacterized conser 64.3 9.7 0.00021 35.1 4.0 40 93-132 444-488 (633)
264 cd07230 Pat_TGL4-5_like Triacy 64.3 6.4 0.00014 35.9 2.9 40 86-125 91-130 (421)
265 cd07209 Pat_hypo_Ecoli_Z1214_l 63.7 11 0.00024 30.8 4.0 33 86-118 16-48 (215)
266 TIGR02816 pfaB_fam PfaB family 63.6 8.5 0.00018 36.2 3.6 32 86-117 254-286 (538)
267 COG0218 Predicted GTPase [Gene 63.5 11 0.00024 30.3 3.8 15 57-71 72-86 (200)
268 cd07228 Pat_NTE_like_bacteria 63.4 13 0.00027 29.2 4.2 32 88-119 20-51 (175)
269 cd07229 Pat_TGL3_like Triacylg 63.2 6.5 0.00014 35.3 2.7 40 86-125 101-140 (391)
270 COG3545 Predicted esterase of 63.0 5.7 0.00012 31.1 2.0 60 244-310 115-177 (181)
271 PF05576 Peptidase_S37: PS-10 62.6 15 0.00033 33.1 4.7 56 247-310 352-412 (448)
272 PF11713 Peptidase_C80: Peptid 61.1 5 0.00011 31.0 1.5 49 60-108 59-116 (157)
273 COG2939 Carboxypeptidase C (ca 60.8 19 0.00041 33.2 5.2 63 247-310 426-489 (498)
274 cd07205 Pat_PNPLA6_PNPLA7_NTE1 58.6 19 0.00041 28.2 4.4 30 88-117 20-49 (175)
275 PF06850 PHB_depo_C: PHB de-po 57.9 12 0.00025 30.1 3.0 64 246-312 134-202 (202)
276 TIGR02764 spore_ybaN_pdaB poly 57.8 11 0.00025 29.9 3.1 33 29-61 153-188 (191)
277 cd07231 Pat_SDP1-like Sugar-De 57.6 11 0.00023 32.9 2.9 40 86-125 86-125 (323)
278 TIGR02884 spore_pdaA delta-lac 56.2 16 0.00035 30.0 3.8 33 29-61 188-221 (224)
279 cd00006 PTS_IIA_man PTS_IIA, P 54.8 80 0.0017 23.0 7.2 73 29-114 3-76 (122)
280 cd07232 Pat_PLPL Patain-like p 54.3 11 0.00024 34.2 2.7 40 86-125 85-124 (407)
281 TIGR02883 spore_cwlD N-acetylm 53.6 29 0.00062 27.7 4.7 39 56-95 1-44 (189)
282 cd07222 Pat_PNPLA4 Patatin-lik 53.5 14 0.0003 30.9 3.0 35 87-122 18-56 (246)
283 cd07212 Pat_PNPLA9 Patatin-lik 53.5 23 0.0005 30.9 4.4 19 99-117 35-53 (312)
284 PF06309 Torsin: Torsin; Inte 52.9 20 0.00043 26.6 3.3 20 25-44 50-69 (127)
285 TIGR00521 coaBC_dfp phosphopan 51.3 1.9E+02 0.0041 26.2 10.1 87 28-117 113-225 (390)
286 COG1576 Uncharacterized conser 50.5 50 0.0011 25.4 5.2 49 53-112 66-114 (155)
287 COG3933 Transcriptional antite 49.5 1.3E+02 0.0029 27.5 8.4 75 28-115 110-184 (470)
288 PF02633 Creatininase: Creatin 49.3 98 0.0021 25.6 7.5 60 56-116 56-121 (237)
289 cd07208 Pat_hypo_Ecoli_yjju_li 49.2 27 0.00058 29.5 4.2 36 86-121 16-52 (266)
290 COG4850 Uncharacterized conser 49.1 23 0.00049 30.8 3.5 113 12-129 199-313 (373)
291 PF00975 Thioesterase: Thioest 48.2 37 0.00081 27.5 4.8 60 246-309 168-229 (229)
292 cd00739 DHPS DHPS subgroup of 47.9 1.1E+02 0.0025 25.8 7.6 77 27-112 120-214 (257)
293 PF14253 AbiH: Bacteriophage a 47.5 21 0.00046 30.1 3.3 21 88-108 226-247 (270)
294 PRK05579 bifunctional phosphop 46.6 2.2E+02 0.0047 25.9 9.6 85 28-116 117-227 (399)
295 PF06342 DUF1057: Alpha/beta h 46.1 22 0.00047 30.4 2.9 66 245-310 211-297 (297)
296 PRK02399 hypothetical protein; 46.1 2.3E+02 0.005 25.7 11.6 98 31-128 6-129 (406)
297 PF06792 UPF0261: Uncharacteri 45.5 2.4E+02 0.0051 25.7 10.6 96 33-128 6-127 (403)
298 PRK10319 N-acetylmuramoyl-l-al 45.2 48 0.001 28.5 5.0 41 54-95 55-100 (287)
299 PF10605 3HBOH: 3HB-oligomer h 45.1 26 0.00057 33.2 3.6 49 244-292 552-603 (690)
300 PRK10431 N-acetylmuramoyl-l-al 44.9 55 0.0012 30.1 5.6 45 56-101 192-241 (445)
301 cd07204 Pat_PNPLA_like Patatin 44.3 38 0.00082 28.3 4.2 37 86-122 17-58 (243)
302 TIGR02873 spore_ylxY probable 44.2 33 0.00071 29.2 3.9 33 29-61 232-264 (268)
303 cd07224 Pat_like Patatin-like 43.0 39 0.00084 28.0 4.1 33 86-118 17-51 (233)
304 PF13207 AAA_17: AAA domain; P 41.6 53 0.0012 23.4 4.3 70 30-102 1-77 (121)
305 PF01520 Amidase_3: N-acetylmu 40.2 26 0.00057 27.2 2.6 45 58-104 1-50 (175)
306 cd07206 Pat_TGL3-4-5_SDP1 Tria 40.0 40 0.00086 29.2 3.7 32 90-121 91-122 (298)
307 PRK07451 translation initiatio 39.9 1.5E+02 0.0032 21.6 7.4 74 15-102 41-114 (115)
308 PF12242 Eno-Rase_NADH_b: NAD( 39.6 62 0.0013 21.6 3.7 39 79-117 19-61 (78)
309 cd02696 MurNAc-LAA N-acetylmur 39.6 54 0.0012 25.4 4.3 44 58-103 2-50 (172)
310 COG0482 TrmU Predicted tRNA(5- 39.4 1.1E+02 0.0024 27.2 6.3 66 27-101 4-69 (356)
311 PRK14581 hmsF outer membrane N 38.2 87 0.0019 30.6 6.0 78 26-103 47-142 (672)
312 PRK06824 translation initiatio 38.0 1.6E+02 0.0035 21.5 7.1 75 14-102 43-117 (118)
313 TIGR01496 DHPS dihydropteroate 37.2 2E+02 0.0043 24.3 7.5 75 27-110 118-210 (257)
314 COG4822 CbiK Cobalamin biosynt 37.0 2.4E+02 0.0051 23.2 7.6 61 26-101 137-199 (265)
315 COG1087 GalE UDP-glucose 4-epi 37.0 1.4E+02 0.0029 26.1 6.3 97 31-130 3-119 (329)
316 cd07211 Pat_PNPLA8 Patatin-lik 36.9 39 0.00084 29.3 3.3 17 99-115 44-60 (308)
317 cd03818 GT1_ExpC_like This fam 36.6 2.9E+02 0.0062 24.7 9.0 37 30-69 2-39 (396)
318 cd07218 Pat_iPLA2 Calcium-inde 36.2 57 0.0012 27.3 4.1 24 99-122 33-57 (245)
319 COG3887 Predicted signaling pr 36.0 62 0.0013 30.7 4.5 47 79-128 323-375 (655)
320 PF15566 Imm18: Immunity prote 35.9 40 0.00087 20.5 2.2 31 78-108 3-33 (52)
321 COG2830 Uncharacterized protei 35.5 28 0.00061 27.0 1.9 75 29-129 13-88 (214)
322 TIGR00246 tRNA_RlmH_YbeA rRNA 35.5 79 0.0017 24.3 4.4 45 55-110 66-110 (153)
323 PF02590 SPOUT_MTase: Predicte 34.6 82 0.0018 24.3 4.4 44 53-107 66-110 (155)
324 COG3621 Patatin [General funct 34.5 59 0.0013 28.4 3.8 39 81-119 22-65 (394)
325 PF09664 DUF2399: Protein of u 34.4 53 0.0012 25.2 3.3 32 26-59 40-71 (152)
326 TIGR03607 patatin-related prot 33.9 49 0.0011 32.6 3.7 24 92-115 62-85 (739)
327 cd07221 Pat_PNPLA3 Patatin-lik 33.5 68 0.0015 27.0 4.1 28 97-124 33-61 (252)
328 COG0331 FabD (acyl-carrier-pro 33.5 48 0.001 28.9 3.3 22 94-115 83-104 (310)
329 TIGR02260 benz_CoA_red_B benzo 33.0 3.8E+02 0.0083 24.5 9.8 39 27-66 266-304 (413)
330 KOG1283 Serine carboxypeptidas 32.6 48 0.001 28.9 3.0 34 275-308 377-410 (414)
331 cd07217 Pat17_PNPLA8_PNPLA9_li 32.5 39 0.00084 30.0 2.6 19 99-117 44-62 (344)
332 PRK09019 translation initiatio 31.5 2E+02 0.0043 20.7 7.1 75 14-102 33-107 (108)
333 PRK00103 rRNA large subunit me 31.5 1.4E+02 0.0031 23.0 5.2 47 54-110 67-113 (157)
334 COG4553 DepA Poly-beta-hydroxy 30.8 3.6E+02 0.0078 23.5 10.3 102 27-132 103-210 (415)
335 PF00448 SRP54: SRP54-type pro 30.4 2.9E+02 0.0062 22.2 8.0 71 47-127 76-148 (196)
336 PLN02752 [acyl-carrier protein 30.1 53 0.0012 29.0 3.1 28 88-115 110-143 (343)
337 PRK11789 N-acetyl-anhydromuran 30.1 44 0.00095 26.6 2.3 27 79-105 132-158 (185)
338 PRK13753 dihydropteroate synth 30.0 2.2E+02 0.0047 24.4 6.5 58 49-113 159-219 (279)
339 KOG2170 ATPase of the AAA+ sup 29.7 39 0.00084 29.2 2.0 20 25-44 107-126 (344)
340 cd01819 Patatin_and_cPLA2 Pata 29.7 91 0.002 23.8 4.0 26 89-114 19-46 (155)
341 TIGR01361 DAHP_synth_Bsub phos 29.4 3.5E+02 0.0076 22.9 9.7 72 27-106 132-206 (260)
342 PF06028 DUF915: Alpha/beta hy 29.3 55 0.0012 27.6 2.9 62 246-310 184-253 (255)
343 COG0069 GltB Glutamate synthas 29.2 1.8E+02 0.0038 27.2 6.2 60 62-121 270-331 (485)
344 KOG3975 Uncharacterized conser 28.7 87 0.0019 26.4 3.8 58 246-309 242-300 (301)
345 PF11144 DUF2920: Protein of u 28.7 1.6E+02 0.0034 26.7 5.7 55 13-68 19-79 (403)
346 PF05577 Peptidase_S28: Serine 28.7 69 0.0015 29.3 3.7 39 247-294 377-415 (434)
347 TIGR01626 ytfJ_HI0045 conserve 28.2 88 0.0019 24.9 3.7 93 9-114 40-142 (184)
348 PRK14974 cell division protein 28.1 4.3E+02 0.0092 23.4 9.2 66 52-127 220-287 (336)
349 PF09994 DUF2235: Uncharacteri 28.0 3.8E+02 0.0082 22.8 8.9 26 91-116 86-112 (277)
350 TIGR02813 omega_3_PfaA polyket 27.9 60 0.0013 37.1 3.5 29 86-114 664-692 (2582)
351 PF02129 Peptidase_S15: X-Pro 27.7 53 0.0012 27.7 2.6 46 243-292 225-271 (272)
352 COG3910 Predicted ATPase [Gene 27.4 1.3E+02 0.0028 24.4 4.3 47 249-311 179-226 (233)
353 cd07220 Pat_PNPLA2 Patatin-lik 27.3 95 0.0021 26.1 4.0 21 98-118 38-58 (249)
354 smart00824 PKS_TE Thioesterase 27.0 1.2E+02 0.0025 23.7 4.4 58 244-308 151-211 (212)
355 PF10081 Abhydrolase_9: Alpha/ 26.5 1.2E+02 0.0025 26.1 4.2 50 82-131 92-147 (289)
356 KOG4388 Hormone-sensitive lipa 26.3 91 0.002 29.7 3.8 81 28-115 397-488 (880)
357 TIGR01840 esterase_phb esteras 26.1 48 0.001 26.7 2.0 22 246-267 168-189 (212)
358 cd07213 Pat17_PNPLA8_PNPLA9_li 25.8 59 0.0013 27.9 2.5 19 99-117 37-55 (288)
359 COG0529 CysC Adenylylsulfate k 25.6 1.8E+02 0.0039 23.2 4.8 35 27-61 22-58 (197)
360 PF03205 MobB: Molybdopterin g 25.6 1.5E+02 0.0031 22.3 4.4 43 29-71 1-45 (140)
361 KOG2521 Uncharacterized conser 25.4 3E+02 0.0065 24.5 6.7 85 28-113 39-126 (350)
362 PF01734 Patatin: Patatin-like 25.3 63 0.0014 25.0 2.5 24 94-117 25-48 (204)
363 TIGR02683 upstrm_HI1419 probab 25.2 94 0.002 21.5 3.0 22 13-38 57-78 (95)
364 PRK14582 pgaB outer membrane N 25.2 1.1E+02 0.0024 29.9 4.4 77 26-102 47-141 (671)
365 PRK14194 bifunctional 5,10-met 25.1 1.4E+02 0.0029 26.0 4.5 34 83-116 143-182 (301)
366 PRK07206 hypothetical protein; 24.5 2.7E+02 0.0058 25.2 6.7 80 29-114 4-89 (416)
367 PF06289 FlbD: Flagellar prote 24.3 1.3E+02 0.0028 19.0 3.2 35 276-311 23-57 (60)
368 PRK07313 phosphopantothenoylcy 23.7 3.4E+02 0.0074 21.5 6.3 61 27-91 113-179 (182)
369 PF01580 FtsK_SpoIIIE: FtsK/Sp 23.5 1.8E+02 0.0039 23.2 4.9 39 31-69 41-85 (205)
370 COG4667 Predicted esterase of 23.5 1E+02 0.0022 26.2 3.3 44 83-126 27-70 (292)
371 COG0860 AmiC N-acetylmuramoyl- 23.4 1.1E+02 0.0024 25.4 3.6 44 55-100 42-90 (231)
372 PF03490 Varsurf_PPLC: Variant 23.0 99 0.0021 18.6 2.3 27 76-102 5-31 (51)
373 PF03681 UPF0150: Uncharacteri 22.6 60 0.0013 19.0 1.4 33 53-92 12-44 (48)
374 cd01715 ETF_alpha The electron 22.1 3.7E+02 0.0081 20.7 7.9 75 28-117 30-106 (168)
375 COG1506 DAP2 Dipeptidyl aminop 22.0 3.5E+02 0.0077 26.2 7.2 43 27-69 551-598 (620)
376 TIGR01425 SRP54_euk signal rec 22.0 5.3E+02 0.011 23.8 7.9 68 50-127 178-247 (429)
377 COG2230 Cfa Cyclopropane fatty 21.9 2.2E+02 0.0048 24.4 5.2 49 78-127 52-104 (283)
378 PHA02114 hypothetical protein 20.9 1.5E+02 0.0032 20.8 3.1 33 29-61 84-116 (127)
379 COG1598 Predicted nuclease of 20.7 2.1E+02 0.0046 18.7 3.9 33 52-91 13-45 (73)
380 TIGR00959 ffh signal recogniti 20.3 6.5E+02 0.014 23.2 8.2 69 49-127 177-247 (428)
381 cd03379 beta_CA_cladeD Carboni 20.2 1.6E+02 0.0034 22.2 3.6 30 82-111 42-71 (142)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-47 Score=316.21 Aligned_cols=294 Identities=38% Similarity=0.754 Sum_probs=223.8
Q ss_pred ccccceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHH
Q 021382 2 DQIEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQD 81 (313)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (313)
..+++++++.+|+++||.+.|+ .++|.|+|+||||.++.+|+.+++.|+.++|||+|+|+||||.|+.|+.-..||+..
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~-~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~ 98 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGP-GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDE 98 (322)
T ss_pred hhcceeeEEEccEEEEEEeecC-CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHH
Confidence 3477899999999999999886 568999999999999999999999999888999999999999999998768999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCC--Chhh-HhhhcCchhhHHhhcCcchh
Q 021382 82 MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPP--GPIE-FHKYLPEGFYISRWQEPGRA 158 (313)
Q Consensus 82 ~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~ 158 (313)
++.|+..+++.||.++++++|||||++||+.+|+.+|++|+++|+++.+.... .+.. ........++.-.++.+...
T Consensus 99 l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~ 178 (322)
T KOG4178|consen 99 LVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKP 178 (322)
T ss_pred HHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcc
Confidence 99999999999999999999999999999999999999999999988654411 1110 11112233333344554444
Q ss_pred hhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccc
Q 021382 159 EADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKF 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
+..+...+.+..... +.. .....+...+. .....+.|+++++++.+...+...++...++. ||++..++
T Consensus 179 E~~~s~~~~~~~~~~-~~~-~~~~~~~~~~~--------~~~~~~~w~t~edi~~~~~~f~~~g~~gplNy-yrn~~r~w 247 (322)
T KOG4178|consen 179 ETELSKDDTEMLVKT-FRT-RKTPGPLIVPK--------QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNY-YRNFRRNW 247 (322)
T ss_pred hhhhccchhHHhHHh-hhc-cccCCccccCC--------CCCCccchhhHHHHHHHHhccccccccccchh-hHHHhhCc
Confidence 444444333332222 110 11110000000 01112568999999998888877778888888 88888777
Q ss_pred ---cCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCc-eEEEeCCCCCCccccChhHHHHHHHHHhhhc
Q 021382 239 ---SLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNL-EIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 312 (313)
Q Consensus 239 ---~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~-~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~~ 312 (313)
......+++|+++|||+.|.+.+.+. ....+++.+|+. +.++++++||+++.|+|+++++.|.+|+.+.
T Consensus 248 ~a~~~~~~~i~iPv~fi~G~~D~v~~~p~-----~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 248 EAAPWALAKITIPVLFIWGDLDPVLPYPI-----FGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred hhccccccccccceEEEEecCcccccchh-----HHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 44556899999999999999987652 233467788886 7788999999999999999999999999763
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=9.7e-39 Score=275.97 Aligned_cols=278 Identities=21% Similarity=0.300 Sum_probs=174.1
Q ss_pred ccceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCC-----CCCCc
Q 021382 4 IEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE-----PEKTS 78 (313)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-----~~~~~ 78 (313)
.+.++++++|.+++|...|+ .+|+|||+|||++++..|+.+++.|.. .|+||++|+||||.|+.+.. ...|+
T Consensus 8 ~~~~~~~~~~~~i~y~~~G~--~~~~vlllHG~~~~~~~w~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~ 84 (294)
T PLN02824 8 VETRTWRWKGYNIRYQRAGT--SGPALVLVHGFGGNADHWRKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYT 84 (294)
T ss_pred CCCceEEEcCeEEEEEEcCC--CCCeEEEECCCCCChhHHHHHHHHHHh-CCeEEEEcCCCCCCCCCCccccccccccCC
Confidence 45788999999999999885 268999999999999999999999876 58999999999999986531 13589
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhh--HHhhcCcc
Q 021382 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFY--ISRWQEPG 156 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 156 (313)
++++++|+.++++.+++++++|+||||||++++.+|+++|++|+++|++++........... ....... ...+....
T Consensus 85 ~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 163 (294)
T PLN02824 85 FETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQP-WLGRPFIKAFQNLLRET 163 (294)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccc-hhhhHHHHHHHHHHhch
Confidence 99999999999999999999999999999999999999999999999998543211000000 0000000 00000000
Q ss_pred hhhhh-ccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCccccccc
Q 021382 157 RAEAD-FGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIH 235 (313)
Q Consensus 157 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
..... +............+.......... ..+..+.+... .........+..... +.. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----------~~~-~ 223 (294)
T PLN02824 164 AVGKAFFKSVATPETVKNILCQCYHDDSAV---TDELVEAILRP-----GLEPGAVDVFLDFIS-----------YSG-G 223 (294)
T ss_pred hHHHHHHHhhcCHHHHHHHHHHhccChhhc---cHHHHHHHHhc-----cCCchHHHHHHHHhc-----------ccc-c
Confidence 00000 000000000011000000000000 00111100000 000000111111100 000 0
Q ss_pred ccccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 236 EKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 236 ~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
........++++|+|+|+|++|.+++... .+.+++..|++++++++++||++++|+|++|++.|.+|+++
T Consensus 224 ~~~~~~l~~i~~P~lvi~G~~D~~~~~~~------~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 224 PLPEELLPAVKCPVLIAWGEKDPWEPVEL------GRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred cchHHHHhhcCCCeEEEEecCCCCCChHH------HHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 00011124789999999999999987532 23467778889999999999999999999999999999975
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.3e-38 Score=273.56 Aligned_cols=276 Identities=21% Similarity=0.311 Sum_probs=174.4
Q ss_pred cccceeeeeCC-----EEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCC
Q 021382 3 QIEHKFIKVQG-----LNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKT 77 (313)
Q Consensus 3 ~~~~~~~~~~g-----~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 77 (313)
+++.+++++++ .+|+|...|+ +++|+|||+||+++++..|..+++.|.+.+|+|+++|+||||.|+++.....|
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~G~-~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~ 96 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDEGP-ADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDY 96 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEecCC-CCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccC
Confidence 46678899988 8999999886 45789999999999999999999998766899999999999999876443468
Q ss_pred cHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcch
Q 021382 78 SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGR 157 (313)
Q Consensus 78 ~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
+++++++|+.++++++++++++|+||||||.+|+.+|.++|++|+++|++++......... ... + ..|...
T Consensus 97 ~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-----~~~-~-~~~~~~-- 167 (302)
T PRK00870 97 TYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPM-----PDA-F-WAWRAF-- 167 (302)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccc-----hHH-H-hhhhcc--
Confidence 9999999999999999999999999999999999999999999999999975321101000 000 0 001000
Q ss_pred hhhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCccccccccc
Q 021382 158 AEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEK 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
.............. ........ .+......... ...........+................. .
T Consensus 168 -----~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 230 (302)
T PRK00870 168 -----SQYSPVLPVGRLVN--GGTVRDLS---DAVRAAYDAPF------PDESYKAGARAFPLLVPTSPDDPAVAANR-A 230 (302)
T ss_pred -----cccCchhhHHHHhh--ccccccCC---HHHHHHhhccc------CChhhhcchhhhhhcCCCCCCCcchHHHH-H
Confidence 00000000000000 00000000 00000000000 00000000000000000000000000000 0
Q ss_pred ccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCce---EEEeCCCCCCccccChhHHHHHHHHHhhhc
Q 021382 238 FSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLE---IIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 312 (313)
Q Consensus 238 ~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~---~~~i~~~gH~~~~e~pe~~~~~i~~fl~~~ 312 (313)
......++++|+++|+|++|++++... +.+++.+|+++ +++++++||++++|+|++|++.|.+|+.+.
T Consensus 231 ~~~~l~~i~~P~lii~G~~D~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 231 AWAVLERWDKPFLTAFSDSDPITGGGD-------AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HHHhhhcCCCceEEEecCCCCcccCch-------HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 001124789999999999999987432 24677788776 889999999999999999999999999753
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.7e-38 Score=272.44 Aligned_cols=267 Identities=29% Similarity=0.441 Sum_probs=173.3
Q ss_pred ccceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 021382 4 IEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 83 (313)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (313)
++.++++++|.+++|...|+ ++||||+||++++...|+.+++.|.+ .++||++|+||||.|+.+. ..|++++++
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~---g~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~--~~~~~~~~a 80 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGE---GDPIVFLHGNPTSSYLWRNIIPHLAG-LGRCLAPDLIGMGASDKPD--IDYTFADHA 80 (295)
T ss_pred CcceEEEECCEEEEEEEeCC---CCEEEEECCCCCCHHHHHHHHHHHhh-CCEEEEEcCCCCCCCCCCC--CCCCHHHHH
Confidence 45678889999999999986 78999999999999999999999876 4799999999999998764 358999999
Q ss_pred HHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchh--hHHhhcCcchhhhh
Q 021382 84 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGF--YISRWQEPGRAEAD 161 (313)
Q Consensus 84 ~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 161 (313)
+|+.++++.+++++++++||||||.+|+.+|.++|++|+++|++++...+.....+ +... ....+.........
T Consensus 81 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK03592 81 RYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDF----PPAVRELFQALRSPGEGEEM 156 (295)
T ss_pred HHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhc----chhHHHHHHHHhCccccccc
Confidence 99999999999999999999999999999999999999999999863222110000 0000 00011100000000
Q ss_pred ccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCC-CCCCCCccccc-------
Q 021382 162 FGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSG-FRTALQVPYRS------- 233 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------- 233 (313)
.. ........ .+.... ...++++..+.+...+.... ....... ++.
T Consensus 157 ~~--~~~~~~~~---~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 210 (295)
T PRK03592 157 VL--EENVFIER---VLPGSI--------------------LRPLSDEEMAVYRRPFPTPESRRPTLSW-PRELPIDGEP 210 (295)
T ss_pred cc--chhhHHhh---cccCcc--------------------cccCCHHHHHHHHhhcCCchhhhhhhhh-hhhcCCCCcc
Confidence 00 00000000 000000 00111121111111110000 0000000 000
Q ss_pred -----ccccccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHH
Q 021382 234 -----IHEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTF 308 (313)
Q Consensus 234 -----~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~f 308 (313)
..........++++|+|+|+|++|.+++++... +.+++..|+++++++++|||++++|+|+++++.|.+|
T Consensus 211 ~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-----~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~f 285 (295)
T PRK03592 211 ADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIR-----DWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAW 285 (295)
T ss_pred hhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHH-----HHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHH
Confidence 000011112468999999999999998544322 2345567899999999999999999999999999999
Q ss_pred hhh
Q 021382 309 LNK 311 (313)
Q Consensus 309 l~~ 311 (313)
+.+
T Consensus 286 l~~ 288 (295)
T PRK03592 286 LRR 288 (295)
T ss_pred HHH
Confidence 975
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.6e-37 Score=273.51 Aligned_cols=282 Identities=20% Similarity=0.330 Sum_probs=172.5
Q ss_pred ceeeeeCCE-EEEEEecCCC---CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHH
Q 021382 6 HKFIKVQGL-NLHIAEAGAD---ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQD 81 (313)
Q Consensus 6 ~~~~~~~g~-~i~~~~~g~~---~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (313)
.++++.+|. +++|.+.|+. +++|+||||||+++++..|..+++.|.. +|+||++|+||||.|+.+.+ ..|++++
T Consensus 63 ~~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~ 140 (360)
T PLN02679 63 CKKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMET 140 (360)
T ss_pred CceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHH
Confidence 356777887 9999998861 1358999999999999999999998865 79999999999999987643 3689999
Q ss_pred HHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHH-hcccccceeeEecCCCCCCChh---hHh-hh-cCchhhHHhh-cC
Q 021382 82 MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAI-QHQERVSGVITLGVPILPPGPI---EFH-KY-LPEGFYISRW-QE 154 (313)
Q Consensus 82 ~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~---~~~-~~-~~~~~~~~~~-~~ 154 (313)
+++++.++++.+++++++|+||||||.+++.+++ .+|++|+++|+++++....... ... .. .+...+...+ ..
T Consensus 141 ~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (360)
T PLN02679 141 WAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQ 220 (360)
T ss_pred HHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhc
Confidence 9999999999999999999999999999999987 4799999999998643211100 000 00 0000000000 00
Q ss_pred cchhhhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccc
Q 021382 155 PGRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSI 234 (313)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
+......+........++..+.......... .++..+..... .........+....... .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-----~------- 280 (360)
T PLN02679 221 RGIASALFNRVKQRDNLKNILLSVYGNKEAV---DDELVEIIRGP-----ADDEGALDAFVSIVTGP-----P------- 280 (360)
T ss_pred hhhHHHHHHHhcCHHHHHHHHHHhccCcccC---CHHHHHHHHhh-----ccCCChHHHHHHHHhcC-----C-------
Confidence 0000000000000011111000000000000 01111100000 00000011111111000 0
Q ss_pred cccccCCCCccCCcEEEEeeCCCcCCCCCCc-hhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 235 HEKFSLPELTVKVPALLILGEKDYFLKFPGI-EDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 235 ~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
.........+|++|||+|+|++|.++|.+.. ..+ .+.+++.+|+++++++++|||++++|+|++|++.|.+||.+
T Consensus 281 ~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~--~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 281 GPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKY--FSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHH--HHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 0000011246899999999999999876421 111 12466778999999999999999999999999999999975
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=9.5e-38 Score=268.23 Aligned_cols=274 Identities=19% Similarity=0.345 Sum_probs=171.9
Q ss_pred cccceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHH
Q 021382 3 QIEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 82 (313)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (313)
+++.++++++|.+++|...|+ +|+||||||++.++..|+.+++.|.+ +|+||++|+||||.|+.+.+ ..|++.++
T Consensus 13 ~~~~~~~~~~~~~i~y~~~G~---~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~ 87 (286)
T PRK03204 13 PFESRWFDSSRGRIHYIDEGT---GPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FGYQIDEH 87 (286)
T ss_pred cccceEEEcCCcEEEEEECCC---CCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cccCHHHH
Confidence 466788999999999999886 78999999999999999999888864 79999999999999987643 35899999
Q ss_pred HHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhc
Q 021382 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADF 162 (313)
Q Consensus 83 ~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (313)
++++.++++++++++++++||||||.+++.+++.+|++|+++|+++++..+...... ..+...+....... ..
T Consensus 88 ~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~ 160 (286)
T PRK03204 88 ARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAM------KAFSRVMSSPPVQY-AI 160 (286)
T ss_pred HHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhH------HHHHHHhccccchh-hh
Confidence 999999999999999999999999999999999999999999988754322110000 00000000000000 00
Q ss_pred cCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCC
Q 021382 163 GRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPE 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
......... + +.. .......... ...+... ............... .+...... ...+.. ....
T Consensus 161 --~~~~~~~~~-~--~~~-~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~--~~~~ 223 (286)
T PRK03204 161 --LRRNFFVER-L--IPA-GTEHRPSSAV-MAHYRAV-----QPNAAARRGVAEMPK--QILAARPL-LARLAR--EVPA 223 (286)
T ss_pred --hhhhHHHHH-h--ccc-cccCCCCHHH-HHHhcCC-----CCCHHHHHHHHHHHH--hcchhhHH-HHHhhh--hhhh
Confidence 000000011 0 000 0000000011 1111000 000010111100000 00000000 000000 0000
Q ss_pred CccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 243 LTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 243 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
..+++|||+|+|++|.+++++.. .+.+++.+|++++++++++||++++|+|++|++.|.+||.
T Consensus 224 ~~~~~PtliI~G~~D~~~~~~~~-----~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 224 TLGTKPTLLVWGMKDVAFRPKTI-----LPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred hcCCCCeEEEecCCCcccCcHHH-----HHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 12389999999999998754321 2357788999999999999999999999999999999984
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.9e-37 Score=264.30 Aligned_cols=263 Identities=16% Similarity=0.205 Sum_probs=169.0
Q ss_pred ccceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 021382 4 IEHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 83 (313)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (313)
+-.++++++|.+++|...+.+++++||||+||+++++..|..+++.|.+ +|+||++|+||||.|+.+. ..|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~ 78 (276)
T TIGR02240 2 FIFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPR--HPYRFPGLA 78 (276)
T ss_pred eeEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCC--CcCcHHHHH
Confidence 3456788899999998753223357999999999999999999998864 7999999999999998653 368999999
Q ss_pred HHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCC-ChhhHhhhcCchhhHHhhcCcchhhhhc
Q 021382 84 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPP-GPIEFHKYLPEGFYISRWQEPGRAEADF 162 (313)
Q Consensus 84 ~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (313)
+|+.++++.+++++++||||||||++++.+|.++|++|+++|+++++.... .+.. +. .......... ..
T Consensus 79 ~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-----~~--~~~~~~~~~~---~~ 148 (276)
T TIGR02240 79 KLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGK-----PK--VLMMMASPRR---YI 148 (276)
T ss_pred HHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCc-----hh--HHHHhcCchh---hh
Confidence 999999999999999999999999999999999999999999998653211 0000 00 0000000000 00
Q ss_pred cCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCC
Q 021382 163 GRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPE 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
........... .+... .. .................. ...+..... ..........
T Consensus 149 ~~~~~~~~~~~---~~~~~-~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-------------~~~~~~~~~l 203 (276)
T TIGR02240 149 QPSHGIHIAPD---IYGGA-FR---RDPELAMAHASKVRSGGK-----LGYYWQLFA-------------GLGWTSIHWL 203 (276)
T ss_pred ccccccchhhh---hccce-ee---ccchhhhhhhhhcccCCC-----chHHHHHHH-------------HcCCchhhHh
Confidence 00000000000 00000 00 000000000000000000 000000000 0000000112
Q ss_pred CccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 243 LTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 243 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
.++++|+|+|+|++|+++++.. .+++.+.+|+++++++++ ||+++.|+|+++++.|.+|+++
T Consensus 204 ~~i~~P~lii~G~~D~~v~~~~------~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 204 HKIQQPTLVLAGDDDPIIPLIN------MRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred hcCCCCEEEEEeCCCCcCCHHH------HHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 4789999999999999997543 234677889999999985 9999999999999999999975
No 8
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.7e-35 Score=250.38 Aligned_cols=242 Identities=20% Similarity=0.278 Sum_probs=154.4
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC-CeEEEEEeChh
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL-AKVFLVAKDFG 106 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~-~~~~lvGhS~G 106 (313)
-+|||+||++.+...|+.+++.|.+.+|+|+++|+||||.|+.+.. ..|+++++++|+.++++++++ ++++|+|||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmG 82 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIG 82 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcc
Confidence 3699999999999999999999977789999999999999976532 368999999999999999988 49999999999
Q ss_pred HHHHHHHHHhcccccceeeEecCCCCCCCh---hhHhhhcCchhhHHhhcCc-chh-hhhccCCcH-HHHHHHHHhhhcC
Q 021382 107 ALTAYMFAIQHQERVSGVITLGVPILPPGP---IEFHKYLPEGFYISRWQEP-GRA-EADFGRLDA-KTVVRNIYILFSR 180 (313)
Q Consensus 107 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~~~~~~~ 180 (313)
|.+++.+|.++|++|+++|++++.....+. ..+...... . ...+... ... ......... ...... + +
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~-- 155 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEG-T-EKIWDYTFGEGPDKPPTGIMMKPEFVRH-Y--Y-- 155 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhc-c-ccceeeeeccCCCCCcchhhcCHHHHHH-H--H--
Confidence 999999999999999999998864221110 000000000 0 0000000 000 000000000 000000 0 0
Q ss_pred CCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEEEEeeCCCcCC
Q 021382 181 SEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFL 260 (313)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~ 260 (313)
... ...+.............. .. +.... ........+++|+++|+|++|.++
T Consensus 156 ---------------~~~-------~~~~~~~~~~~~~~~~~~-~~----~~~~~-~~~~~~~~i~vP~lvi~g~~D~~~ 207 (255)
T PLN02965 156 ---------------YNQ-------SPLEDYTLSSKLLRPAPV-RA----FQDLD-KLPPNPEAEKVPRVYIKTAKDNLF 207 (255)
T ss_pred ---------------hcC-------CCHHHHHHHHHhcCCCCC-cc----hhhhh-hccchhhcCCCCEEEEEcCCCCCC
Confidence 000 000000000010000000 00 00010 011122368999999999999998
Q ss_pred CCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 261 KFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
++.. .+.+++.+|+++++++++|||++++|+|++|++.|.+|++.
T Consensus 208 ~~~~------~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 208 DPVR------QDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred CHHH------HHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 7532 34678899999999999999999999999999999999864
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=8.4e-35 Score=249.82 Aligned_cols=268 Identities=22% Similarity=0.321 Sum_probs=162.0
Q ss_pred ccceeeeeC-----CEEEEEEecCCCCCCcEEEEECCCCCchhhHHH---HHHHHHHCCCEEEeeCCCCCCCCCCCCCCC
Q 021382 4 IEHKFIKVQ-----GLNLHIAEAGADADAHVVVFLHGFPEIWYSWRH---QMVGVATAGFRAIAPDCRGYGLSDPPAEPE 75 (313)
Q Consensus 4 ~~~~~~~~~-----g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~---~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~ 75 (313)
...++..++ |.+++|...|+ +|+||||||++.+...|.. ++..+.+.+|+|+++|+||||.|+.+....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~y~~~g~---~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~ 81 (282)
T TIGR03343 5 STSKFVKINEKGLSNFRIHYNEAGN---GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDE 81 (282)
T ss_pred CcceEEEcccccccceeEEEEecCC---CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcc
Confidence 445555553 67899998875 6899999999988777764 355566668999999999999998653222
Q ss_pred CCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCc
Q 021382 76 KTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEP 155 (313)
Q Consensus 76 ~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (313)
.++. .+++|+.++++.+++++++++||||||++++.+|.++|++++++|+++++... ...... .+.. ....+.
T Consensus 82 ~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~--~~~~~~-~~~~-~~~~~~-- 154 (282)
T TIGR03343 82 QRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLG--PSLFAP-MPME-GIKLLF-- 154 (282)
T ss_pred cccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCC--cccccc-CchH-HHHHHH--
Confidence 2232 57899999999999999999999999999999999999999999999854211 000000 0000 000000
Q ss_pred chhhhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhh-cccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccc
Q 021382 156 GRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMD-LVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSI 234 (313)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (313)
..+...... ........+.... .. ....... .+.... -.......+..... . .. +...
T Consensus 155 ----~~~~~~~~~-~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~-~~----~~~~ 213 (282)
T TIGR03343 155 ----KLYAEPSYE-TLKQMLNVFLFDQ-SL--ITEELLQGRWENIQ-----RQPEHLKNFLISSQ---K-AP----LSTW 213 (282)
T ss_pred ----HHhcCCCHH-HHHHHHhhCccCc-cc--CcHHHHHhHHHHhh-----cCHHHHHHHHHhcc---c-cc----cccc
Confidence 000000000 0111000000000 00 0000000 000000 00001111110000 0 00 0000
Q ss_pred cccccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 235 HEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 235 ~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
.......++++|+|+++|++|.+++.+.. +.+++.+|++++++++++||+++.|+|++|++.|.+||.
T Consensus 214 --~~~~~l~~i~~Pvlli~G~~D~~v~~~~~------~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 214 --DVTARLGEIKAKTLVTWGRDDRFVPLDHG------LKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred --hHHHHHhhCCCCEEEEEccCCCcCCchhH------HHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 00111247899999999999999875432 346778899999999999999999999999999999985
No 10
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1e-34 Score=256.20 Aligned_cols=122 Identities=26% Similarity=0.450 Sum_probs=110.2
Q ss_pred eeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCC--CCCcHHHHHHH
Q 021382 8 FIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP--EKTSFQDMVDD 85 (313)
Q Consensus 8 ~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~d 85 (313)
.++.+|.+++|.+.|+ .++|+|||||||+++...|+.+++.|.+ +|+||++|+||||.|+.+... ..|++++++++
T Consensus 109 ~~~~~~~~~~y~~~G~-~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 109 QASSDLFRWFCVESGS-NNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred EEcCCceEEEEEecCC-CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 4567999999999986 3578999999999999999999988864 799999999999999876432 36899999999
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
+.++++++++++++|+||||||++++.+|..+|++|+++|+++++.
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 9999999999999999999999999999999999999999998653
No 11
>PLN02578 hydrolase
Probab=100.00 E-value=1.4e-34 Score=255.78 Aligned_cols=118 Identities=25% Similarity=0.383 Sum_probs=108.0
Q ss_pred eeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 021382 7 KFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDL 86 (313)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di 86 (313)
++++.+|.+++|...|+ +|||||+||+++++..|..+++.|.+ +|+|+++|+||||.|+++. ..|+...+++++
T Consensus 69 ~~~~~~~~~i~Y~~~g~---g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l 142 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGE---GLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKAL--IEYDAMVWRDQV 142 (354)
T ss_pred eEEEECCEEEEEEEcCC---CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcc--cccCHHHHHHHH
Confidence 56778999999998886 78999999999999999999988864 7999999999999998763 468999999999
Q ss_pred HHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.++++.++.++++++||||||.+++.+|.++|++|+++|+++++
T Consensus 143 ~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 143 ADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred HHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 99999999999999999999999999999999999999998754
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=7.8e-35 Score=261.70 Aligned_cols=126 Identities=20% Similarity=0.372 Sum_probs=108.2
Q ss_pred cceeeeeCCEEEEEEecCCCC--CCcEEEEECCCCCchhhHHH-HHHHHH---HCCCEEEeeCCCCCCCCCCCCCCCCCc
Q 021382 5 EHKFIKVQGLNLHIAEAGADA--DAHVVVFLHGFPEIWYSWRH-QMVGVA---TAGFRAIAPDCRGYGLSDPPAEPEKTS 78 (313)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~--~~~~ivllHG~~~~~~~w~~-~~~~l~---~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (313)
.+.+.+++|.++||...|+.. .+|+|||+|||+++...|.. +++.|. +.+|+||++|+||||.|+.+. ...|+
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-~~~yt 255 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-DSLYT 255 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-CCcCC
Confidence 346777889999999988632 25799999999999999985 445554 258999999999999998764 34699
Q ss_pred HHHHHHHHH-HHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 79 FQDMVDDLL-AILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 79 ~~~~~~di~-~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
++++++++. .+++.+++++++++||||||++++.+|+++|++|+++|+++++.
T Consensus 256 l~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 256 LREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 999999995 89999999999999999999999999999999999999998653
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.9e-34 Score=246.77 Aligned_cols=270 Identities=20% Similarity=0.310 Sum_probs=171.3
Q ss_pred cceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHH
Q 021382 5 EHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (313)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (313)
..++++++|.+++|...|+ +++|+|||+||++++...|+.+++.|.+ +|+|+++|+||||.|+.+.. ..++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~g~-~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~ 83 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGP-TAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR-FRFTLPSMAE 83 (278)
T ss_pred ccceeeECCEEEEEEecCC-CCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc-cCCCHHHHHH
Confidence 4578899999999999886 3578999999999999999999988865 69999999999999986543 3689999999
Q ss_pred HHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccC
Q 021382 85 DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGR 164 (313)
Q Consensus 85 di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (313)
|+.++++++++++++|+||||||++++.+|.++|++++++|++++........ .....+. ...+... ..
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~-~~~~~~~---~~~~~~~-------~~ 152 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGM-AGTLFPY---MARVLAC-------NP 152 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccc-cccccch---hhHhhhh-------cc
Confidence 99999999999999999999999999999999999999999987543211100 0000000 0000000 00
Q ss_pred CcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCC-CCCCCCcccccccc-cccCCC
Q 021382 165 LDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSG-FRTALQVPYRSIHE-KFSLPE 242 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 242 (313)
.. ...... ..... .....+.... . ..........+........ ....... ...... ......
T Consensus 153 ~~-~~~~~~----~~~~~----~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 216 (278)
T TIGR03056 153 FT-PPMMSR----GAADQ----QRVERLIRDT--G----SLLDKAGMTYYGRLIRSPAHVDGALSM-MAQWDLAPLNRDL 216 (278)
T ss_pred cc-hHHHHh----hcccC----cchhHHhhcc--c----cccccchhhHHHHhhcCchhhhHHHHH-hhcccccchhhhc
Confidence 00 000000 00000 0000000000 0 0000000011110000000 0000000 000000 001122
Q ss_pred CccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 243 LTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 243 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
.++++|+++|+|++|..++... .+.+++.+|+++++.++++||+++.|+|+++++.|.+|++
T Consensus 217 ~~i~~P~lii~g~~D~~vp~~~------~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 217 PRITIPLHLIAGEEDKAVPPDE------SKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ccCCCCEEEEEeCCCcccCHHH------HHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 4689999999999999987532 2346778899999999999999999999999999999984
No 14
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=255.62 Aligned_cols=119 Identities=20% Similarity=0.373 Sum_probs=99.9
Q ss_pred eCCEEEEEEecCCCCC-------CcEEEEECCCCCchhhHH--HHHHHH-------HHCCCEEEeeCCCCCCCCCCCCCC
Q 021382 11 VQGLNLHIAEAGADAD-------AHVVVFLHGFPEIWYSWR--HQMVGV-------ATAGFRAIAPDCRGYGLSDPPAEP 74 (313)
Q Consensus 11 ~~g~~i~~~~~g~~~~-------~~~ivllHG~~~~~~~w~--~~~~~l-------~~~~~~vi~~D~~G~G~S~~~~~~ 74 (313)
++|.+++|.+.|+ ++ +|+||||||++++...|. .+...| ..++|+||++|+||||.|+.+.+.
T Consensus 47 ~~g~~i~y~~~G~-~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGT-PHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCC-CCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 5899999999986 33 789999999999988885 333333 245799999999999999866432
Q ss_pred -----CCCcHHHHHHHHHHH-HHHhCCCeEE-EEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 75 -----EKTSFQDMVDDLLAI-LDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 75 -----~~~~~~~~~~di~~~-~~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
..|+++++++++.++ ++.+++++++ |+||||||++|+.+|.++|++|+++|++++.
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 258999999998885 5889999986 8999999999999999999999999999754
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.5e-34 Score=244.94 Aligned_cols=252 Identities=19% Similarity=0.244 Sum_probs=152.6
Q ss_pred EEEEEecCCCCCC-cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 021382 15 NLHIAEAGADADA-HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL 93 (313)
Q Consensus 15 ~i~~~~~g~~~~~-~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l 93 (313)
.++|.+.|+ | |+||||||+++++..|..++..|.+ +|+|+++|+||||.|+.+ ..++++++++++.+ +
T Consensus 3 ~~~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~---~~~~~~~~~~~l~~----~ 71 (256)
T PRK10349 3 NIWWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGF---GALSLADMAEAVLQ----Q 71 (256)
T ss_pred ccchhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCC---CCCCHHHHHHHHHh----c
Confidence 377888886 4 4799999999999999999998864 799999999999999753 34788888887764 5
Q ss_pred CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHH
Q 021382 94 GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRN 173 (313)
Q Consensus 94 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (313)
+++++++|||||||.+++.+|.++|++++++|+++++........+. ..... ....+.. . .. .........
T Consensus 72 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~-~~~~~~~--~----~~-~~~~~~~~~ 142 (256)
T PRK10349 72 APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWP-GIKPD-VLAGFQQ--Q----LS-DDFQRTVER 142 (256)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCC-cccHH-HHHHHHH--H----HH-hchHHHHHH
Confidence 68999999999999999999999999999999997532210000000 00000 0000000 0 00 000011111
Q ss_pred HHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEEEEe
Q 021382 174 IYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLIL 253 (313)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~ 253 (313)
..................+....... ..+ ...........+.. .+......++++|||+|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~---------------~~~~~~l~~i~~P~lii~ 203 (256)
T PRK10349 143 FLALQTMGTETARQDARALKKTVLAL-PMP---EVDVLNGGLEILKT---------------VDLRQPLQNVSMPFLRLY 203 (256)
T ss_pred HHHHHHccCchHHHHHHHHHHHhhcc-CCC---cHHHHHHHHHHHHh---------------CccHHHHhhcCCCeEEEe
Confidence 00000000000000000000000000 000 00000000000000 001112247899999999
Q ss_pred eCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 254 GEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 254 G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
|++|.+++.+. .+.+++.+|+++++++++|||++++|+|++|++.|.+|-++
T Consensus 204 G~~D~~~~~~~------~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 204 GYLDGLVPRKV------VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred cCCCccCCHHH------HHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 99999886532 23567788999999999999999999999999999998653
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=2.9e-33 Score=236.75 Aligned_cols=249 Identities=17% Similarity=0.235 Sum_probs=158.3
Q ss_pred EEEEEecCC--CCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 021382 15 NLHIAEAGA--DADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH 92 (313)
Q Consensus 15 ~i~~~~~g~--~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~ 92 (313)
+++|...+. ..++|||||+||++++...|..++..|.+ +|+||++|+||||.|+.+ ..+++.++++|+.++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~---~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRD---PVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCC---CCCCHHHHHHHHHHHHHH
Confidence 455655432 23578999999999999999998888865 799999999999999754 358999999999999999
Q ss_pred hCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHH
Q 021382 93 LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVR 172 (313)
Q Consensus 93 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (313)
+++++++|+||||||++++.+|.++|++|+++|+++++.......... . ....+... ... .........
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~-----~-~~~~~~~~--~~~---~~~~~~~~~ 146 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHD-----E-IFAAINAV--SEA---GATTRQQAA 146 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhH-----H-HHHHHHHh--hhc---ccccHHHHH
Confidence 999999999999999999999999999999999987432211100000 0 00000000 000 000000000
Q ss_pred HHHhhhcCCCCCCCCchhhhhhcccCCCCCCCC-CCHH-HHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEE
Q 021382 173 NIYILFSRSEIPIAPENKEIMDLVSDSTPLPPW-FTEE-DLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPAL 250 (313)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 250 (313)
..... . .. . ...............+ +... .... +..+. .......+++|+|
T Consensus 147 ~~~~~--~----~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~~~~~P~l 199 (255)
T PRK10673 147 AIMRQ--H----LN-E-EGVIQFLLKSFVDGEWRFNVPVLWDQ-----------------YPHIV--GWEKIPAWPHPAL 199 (255)
T ss_pred HHHHH--h----cC-C-HHHHHHHHhcCCcceeEeeHHHHHHh-----------------HHHHh--CCcccCCCCCCeE
Confidence 00000 0 00 0 0000000000000000 0000 0000 00000 0011236789999
Q ss_pred EEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 251 LILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 251 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
+|+|++|..++... .+.+++.+|++++++++++||++++|+|+++++.|.+||..
T Consensus 200 ~i~G~~D~~~~~~~------~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 200 FIRGGNSPYVTEAY------RDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred EEECCCCCCCCHHH------HHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999886432 23467888999999999999999999999999999999975
No 17
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=1e-32 Score=231.67 Aligned_cols=99 Identities=23% Similarity=0.294 Sum_probs=89.9
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChh
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 106 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~G 106 (313)
+|+|||+||+++++..|+.+++.| + +|+||++|+||||.|+.+. ..+++++++|+.++++.+++++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 688999999999999999999887 4 6999999999999998653 3489999999999999999999999999999
Q ss_pred HHHHHHHHHhccc-ccceeeEecCC
Q 021382 107 ALTAYMFAIQHQE-RVSGVITLGVP 130 (313)
Q Consensus 107 g~ia~~~a~~~p~-~v~~lvl~~~~ 130 (313)
|.+|+.+|+++|+ +|++++++++.
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCC
Confidence 9999999999976 49999988643
No 18
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=6.2e-33 Score=244.43 Aligned_cols=119 Identities=26% Similarity=0.348 Sum_probs=99.3
Q ss_pred ceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchh------------hHHHHHH---HHHHCCCEEEeeCCCCCCCCCC
Q 021382 6 HKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWY------------SWRHQMV---GVATAGFRAIAPDCRGYGLSDP 70 (313)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~------------~w~~~~~---~l~~~~~~vi~~D~~G~G~S~~ 70 (313)
..+.+++|.+++|+..|+. ++|+|||||+.++.. .|..++. .|.+++|+||++|+||||.|.
T Consensus 38 ~~~~~~~~~~l~y~~~G~~--~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~- 114 (343)
T PRK08775 38 MRHAGLEDLRLRYELIGPA--GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL- 114 (343)
T ss_pred ecCCCCCCceEEEEEeccC--CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC-
Confidence 3455668999999999852 556888877776655 6888775 464457999999999999884
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCeE-EEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 71 PAEPEKTSFQDMVDDLLAILDHLGLAKV-FLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 71 ~~~~~~~~~~~~~~di~~~~~~l~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+ ..|++.++++|+.++++.++++++ +||||||||+||+.+|.++|++|+++|++++.
T Consensus 115 ~---~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 115 D---VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred C---CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 2 247889999999999999999875 79999999999999999999999999999864
No 19
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=9.3e-33 Score=238.67 Aligned_cols=254 Identities=21% Similarity=0.332 Sum_probs=155.2
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHHC-CCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeC
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 104 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS 104 (313)
+++||||+|||.++..+|++++..|... +++|+|+|++|||.|+..+....|+..++++-+..++...+.++++++|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 5899999999999999999999888654 399999999999966555445679999999999999999999999999999
Q ss_pred hhHHHHHHHHHhcccccceeeEe---cCCCCCCCh--hhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHHHhhhc
Q 021382 105 FGALTAYMFAIQHQERVSGVITL---GVPILPPGP--IEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFS 179 (313)
Q Consensus 105 ~Gg~ia~~~a~~~p~~v~~lvl~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (313)
|||.+|..+|+.+|+.|+++|++ +++...... ...... ...+..................... .
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~~~~~~~~~--~--- 205 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRL------LDKFLSALELLIPLSLTEPVRLVSE--G--- 205 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHh------hhhhccHhhhcCccccccchhheeH--h---
Confidence 99999999999999999999944 433221110 000000 0000000000000000000000000 0
Q ss_pred CCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhcc---CCCCCCCCcc-cccccc---cccCCCCccC-CcEEE
Q 021382 180 RSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEK---SGFRTALQVP-YRSIHE---KFSLPELTVK-VPALL 251 (313)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~---~~~~~~~~i~-~P~l~ 251 (313)
......... ....+..+. ....... ..+.....+. +..... .......++. ||+|+
T Consensus 206 -----------~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvli 269 (326)
T KOG1454|consen 206 -----------LLRCLKVVY-TDPSRLLEK----LLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLI 269 (326)
T ss_pred -----------hhcceeeec-cccccchhh----hhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEE
Confidence 000000000 000000000 0000000 0000000000 001110 1111123555 99999
Q ss_pred EeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhhc
Q 021382 252 ILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 312 (313)
Q Consensus 252 i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~~ 312 (313)
+||++|+++|.+. +..+++.+||++++++++|||.+|+|+||++++.|..|+.+.
T Consensus 270 i~G~~D~~~p~~~------~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 270 IWGDKDQIVPLEL------AEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred EEcCcCCccCHHH------HHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 9999999998652 345677779999999999999999999999999999999753
No 20
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=8.3e-33 Score=243.54 Aligned_cols=121 Identities=16% Similarity=0.287 Sum_probs=93.4
Q ss_pred eeCCEEEEEEecCCC-CCC-cEEEEECCCCCchhhHHHHH---HHHHHCCCEEEeeCCCCCCCCCCCCCC-CCCcHHH--
Q 021382 10 KVQGLNLHIAEAGAD-ADA-HVVVFLHGFPEIWYSWRHQM---VGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQD-- 81 (313)
Q Consensus 10 ~~~g~~i~~~~~g~~-~~~-~~ivllHG~~~~~~~w~~~~---~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~-- 81 (313)
+++|++++|...|+. +++ |+||++||+++++..|..++ +.|...+|+||++|+||||.|+.+... ..|++++
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 358999999999862 223 56777777777776776543 356545799999999999999865421 2345443
Q ss_pred ---HHHHHHH----HHHHhCCCe-EEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 82 ---MVDDLLA----ILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 82 ---~~~di~~----~~~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+++|+.+ +++.|++++ ++||||||||++|+.+|++||++|+++|++++.
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 5677765 778899999 589999999999999999999999999999754
No 21
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=5.1e-32 Score=232.16 Aligned_cols=123 Identities=24% Similarity=0.424 Sum_probs=102.4
Q ss_pred eeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCC-CCcHHHHHHH
Q 021382 8 FIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPE-KTSFQDMVDD 85 (313)
Q Consensus 8 ~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~d 85 (313)
+++++|.++.|...++...+++|||+||++++...|...+..++. .+|+|+++|+||||.|+.+.... .++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 85 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDE 85 (288)
T ss_pred eecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHH
Confidence 678888899998877533468999999998776555444444444 48999999999999998653322 4899999999
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+.++++.+++++++++||||||.+++.+|..+|++++++|++++.
T Consensus 86 ~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 86 LEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred HHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 999999999999999999999999999999999999999988753
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=7.6e-32 Score=227.55 Aligned_cols=253 Identities=23% Similarity=0.336 Sum_probs=158.8
Q ss_pred EEEEecCCC-CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 021382 16 LHIAEAGAD-ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 94 (313)
Q Consensus 16 i~~~~~g~~-~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~ 94 (313)
++|+..|+. +++|+|||+|||++++..|..++..|.+ +|+|+++|+||||.|+.+. ...++++++++++.++++.++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGEL-PPGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCC-cccCCHHHHHHHHHHHHHHhC
Confidence 467777742 2478999999999999999988887764 7999999999999997653 356899999999999999999
Q ss_pred CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHH
Q 021382 95 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNI 174 (313)
Q Consensus 95 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (313)
+++++++||||||++++.+|+++|++++++|++++.... .+..... ... ...+...... ..+ .. ....
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~-~~~~~~~-~~~---~~~~~~~~~~-~~~-----~~-~~~~ 146 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP-DPHTRRC-FDV---RIALLQHAGP-EAY-----VH-AQAL 146 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC-ChhHHHH-HHH---HHHHHhccCc-chh-----hh-hhhh
Confidence 999999999999999999999999999999998753221 1110000 000 0000000000 000 00 0000
Q ss_pred HhhhcCCCCCCCCchhhhhhc-ccCCCCCCCCCCHHH-HHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEEEE
Q 021382 175 YILFSRSEIPIAPENKEIMDL-VSDSTPLPPWFTEED-LAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLI 252 (313)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i 252 (313)
+ .+.... ........... .... ..+..... ...... ... + .......++++|++++
T Consensus 147 ~-~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~--~-------------~~~~~~~~i~~P~l~i 204 (257)
T TIGR03611 147 F-LYPADW--ISENAARLAADEAHAL---AHFPGKANVLRRINA-LEA--F-------------DVSARLDRIQHPVLLI 204 (257)
T ss_pred h-hccccH--hhccchhhhhhhhhcc---cccCccHHHHHHHHH-HHc--C-------------CcHHHhcccCccEEEE
Confidence 0 000000 00000000000 0000 00000000 000000 000 0 0111223689999999
Q ss_pred eeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 253 LGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 253 ~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
+|++|.+++.+.. +.+.+.+|+++++.++++||++++|+|+++++.|.+||+
T Consensus 205 ~g~~D~~~~~~~~------~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 205 ANRDDMLVPYTQS------LRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred ecCcCcccCHHHH------HHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999875432 345667889999999999999999999999999999986
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=4.6e-32 Score=239.53 Aligned_cols=122 Identities=20% Similarity=0.336 Sum_probs=102.8
Q ss_pred eeeeCCEEEEEEecCCC--CCCcEEEEECCCCCchhh-HHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHH
Q 021382 8 FIKVQGLNLHIAEAGAD--ADAHVVVFLHGFPEIWYS-WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (313)
Q Consensus 8 ~~~~~g~~i~~~~~g~~--~~~~~ivllHG~~~~~~~-w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (313)
.++.+|.+|+|..+++. +.+++|||+|||+++... |..+++.|.+.||+|+++|+||||.|+.+. ...++++++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-~~~~~~~~~~~ 144 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH-GYIPSFDDLVD 144 (349)
T ss_pred EEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-CCcCCHHHHHH
Confidence 34458999999888752 235789999999987654 678888887779999999999999998643 23468999999
Q ss_pred HHHHHHHHhCCC------eEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 85 DLLAILDHLGLA------KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 85 di~~~~~~l~~~------~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
|+.++++.++.+ +++|+||||||++++.++.++|+++.++|++++.
T Consensus 145 dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~ 196 (349)
T PLN02385 145 DVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPM 196 (349)
T ss_pred HHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccc
Confidence 999999988643 7999999999999999999999999999999853
No 24
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=2.3e-31 Score=233.09 Aligned_cols=125 Identities=21% Similarity=0.281 Sum_probs=108.0
Q ss_pred ceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCC----CCCcHHH
Q 021382 6 HKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP----EKTSFQD 81 (313)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~ 81 (313)
..++..+|.+++|...++..++++|||+||++++...|..++..+++.||+|+++|+||||.|+.+... ..+++.+
T Consensus 33 ~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~ 112 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFND 112 (330)
T ss_pred eEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHH
Confidence 346667999999999875334679999999999998999988888888999999999999999864221 2368999
Q ss_pred HHHHHHHHHHHh----CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 82 MVDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 82 ~~~di~~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+++|+.++++.+ +.++++++||||||.+++.+|+++|++++++|++++.
T Consensus 113 ~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 113 YVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 999999999987 6789999999999999999999999999999998753
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.5e-31 Score=224.34 Aligned_cols=250 Identities=23% Similarity=0.342 Sum_probs=159.7
Q ss_pred EEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 021382 15 NLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 94 (313)
Q Consensus 15 ~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~ 94 (313)
+++|...|+.+++|+|||+||++.+...|..+++.|. .+|+|+++|+||||.|+.+. ..+++.++++|+.++++.++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLG 77 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC
Confidence 3678777864357899999999999999999888875 58999999999999997543 46899999999999999999
Q ss_pred CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHH
Q 021382 95 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNI 174 (313)
Q Consensus 95 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (313)
.++++++||||||++++.+|..+|++++++++++++.....+..+... ...+... .........
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~------~~~~~~~----------~~~~~~~~~ 141 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNAR------IAAVRAE----------GLAALADAV 141 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHH------Hhhhhhc----------cHHHHHHHH
Confidence 999999999999999999999999999999988754321111111000 0000000 000000000
Q ss_pred HhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCccccccc-ccccCCCCccCCcEEEEe
Q 021382 175 YILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIH-EKFSLPELTVKVPALLIL 253 (313)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~P~l~i~ 253 (313)
...+...... .... ...+.+...+........... +..+. ........++++|+++++
T Consensus 142 ~~~~~~~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Pvlii~ 200 (251)
T TIGR02427 142 LERWFTPGFR-EAHP-------------------ARLDLYRNMLVRQPPDGYAGC-CAAIRDADFRDRLGAIAVPTLCIA 200 (251)
T ss_pred HHHHcccccc-cCCh-------------------HHHHHHHHHHHhcCHHHHHHH-HHHHhcccHHHHhhhcCCCeEEEE
Confidence 0000000000 0000 000000000000000000000 00000 001111236889999999
Q ss_pred eCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 254 GEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 254 G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
|++|..++.+.. ..+.+.+++.+++.++++||++++|+|+++++.|.+|+.
T Consensus 201 g~~D~~~~~~~~------~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 201 GDQDGSTPPELV------REIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred eccCCcCChHHH------HHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 999999976432 235667789999999999999999999999999999984
No 26
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.98 E-value=8.9e-31 Score=223.12 Aligned_cols=262 Identities=17% Similarity=0.201 Sum_probs=159.8
Q ss_pred eCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 021382 11 VQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAIL 90 (313)
Q Consensus 11 ~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~ 90 (313)
-+|-+++|...+ +++|+|||+||+..+...|..++..|.+.||+|+++|+||||.|...+. ..++++++++++.+++
T Consensus 4 ~~~~~~~~~~~~--~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i 80 (273)
T PLN02211 4 ENGEEVTDMKPN--RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFL 80 (273)
T ss_pred cccccccccccc--CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHH
Confidence 367788887742 3478999999999999999999988877789999999999999854332 3479999999999999
Q ss_pred HHhC-CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHH
Q 021382 91 DHLG-LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKT 169 (313)
Q Consensus 91 ~~l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (313)
+.++ .++++||||||||+++..++..+|++|+++|++++.....+................+...... .+
T Consensus 81 ~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~------- 151 (273)
T PLN02211 81 SSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYEL--GF------- 151 (273)
T ss_pred HhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceee--ee-------
Confidence 9985 5899999999999999999999999999999987532211110000000000000000000000 00
Q ss_pred HHHHHHhhhcCCCCCCCC-chhhhh-hcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCcc-C
Q 021382 170 VVRNIYILFSRSEIPIAP-ENKEIM-DLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTV-K 246 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~ 246 (313)
. .......... ...++. ..+. .....+............. ... +... .......++ +
T Consensus 152 ------~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~----~~~-~~~~--~~~~~~~~~~~ 211 (273)
T PLN02211 152 ------G-LGPDQPPTSAIIKKEFRRKILY------QMSPQEDSTLAAMLLRPGP----ILA-LRSA--RFEEETGDIDK 211 (273)
T ss_pred ------c-cCCCCCCceeeeCHHHHHHHHh------cCCCHHHHHHHHHhcCCcC----ccc-cccc--cccccccccCc
Confidence 0 0000000000 000000 0000 0011111111111110000 000 1000 000011234 7
Q ss_pred CcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 247 VPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 247 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
+|+++|+|++|..+|++. .+.+.+.+|+++++.++ +||++++|+|+++++.|.++...
T Consensus 212 vP~l~I~g~~D~~ip~~~------~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 212 VPRVYIKTLHDHVVKPEQ------QEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred cceEEEEeCCCCCCCHHH------HHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 999999999999997542 24567778888999997 89999999999999999998653
No 27
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.98 E-value=7e-32 Score=238.46 Aligned_cols=122 Identities=20% Similarity=0.367 Sum_probs=100.4
Q ss_pred eeCCEEEEEEecCC--CCCCcEEEEECCCCCchh-----------hHHHHHH---HHHHCCCEEEeeCCCC--CCCCCCC
Q 021382 10 KVQGLNLHIAEAGA--DADAHVVVFLHGFPEIWY-----------SWRHQMV---GVATAGFRAIAPDCRG--YGLSDPP 71 (313)
Q Consensus 10 ~~~g~~i~~~~~g~--~~~~~~ivllHG~~~~~~-----------~w~~~~~---~l~~~~~~vi~~D~~G--~G~S~~~ 71 (313)
.++|.+|+|...|+ ...+++|||+||++++++ .|+.++. .|...+|+||++|+|| ||.|.+.
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 35899999999985 123579999999999764 3777652 5555689999999999 5655431
Q ss_pred ---CC-------CCCCcHHHHHHHHHHHHHHhCCCe-EEEEEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 72 ---AE-------PEKTSFQDMVDDLLAILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 72 ---~~-------~~~~~~~~~~~di~~~~~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
+. ...|++.++++|+.++++++++++ ++|+||||||++++.+|+++|++|+++|++++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 11 125899999999999999999999 9999999999999999999999999999998653
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=1.9e-31 Score=237.58 Aligned_cols=122 Identities=19% Similarity=0.292 Sum_probs=99.3
Q ss_pred eeCCEEEEEEecCCC--CCCcEEEEECCCCCchhh-------------HHHHHH---HHHHCCCEEEeeCCCCC-CCCCC
Q 021382 10 KVQGLNLHIAEAGAD--ADAHVVVFLHGFPEIWYS-------------WRHQMV---GVATAGFRAIAPDCRGY-GLSDP 70 (313)
Q Consensus 10 ~~~g~~i~~~~~g~~--~~~~~ivllHG~~~~~~~-------------w~~~~~---~l~~~~~~vi~~D~~G~-G~S~~ 70 (313)
+++|++++|...|+. .++|+|||+||+++++.. |..++. .|...+|+||++|+||+ |.|+.
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 348889999999852 236899999999999875 666552 34345899999999993 55543
Q ss_pred CCC------------CCCCcHHHHHHHHHHHHHHhCCCe-EEEEEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 71 PAE------------PEKTSFQDMVDDLLAILDHLGLAK-VFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 71 ~~~------------~~~~~~~~~~~di~~~~~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
+.. ...|++.++++++.++++.+++++ ++|+||||||++++.+|.++|++|+++|++++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 210 026899999999999999999999 5999999999999999999999999999998643
No 29
>PHA02857 monoglyceride lipase; Provisional
Probab=99.98 E-value=3.5e-30 Score=220.53 Aligned_cols=123 Identities=15% Similarity=0.136 Sum_probs=100.5
Q ss_pred eeeeeCCEEEEEEecCCC-CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH
Q 021382 7 KFIKVQGLNLHIAEAGAD-ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 85 (313)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~-~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 85 (313)
.+++.||.+++|+.+-+. ...+.|+|+||+++++..|..+++.|.+.||+|+++|+||||.|+... ....++.++++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~-~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK-MMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc-CCcCCHHHHHHH
Confidence 356679999999876542 234567777999999999999999998879999999999999997532 223466777788
Q ss_pred HHHHHHHh----CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 86 LLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 86 i~~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+.+.++.+ +.++++|+||||||.+|+.+|.++|++++++|++++.
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~ 131 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPL 131 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccc
Confidence 88777654 3468999999999999999999999999999999854
No 30
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=2.1e-30 Score=216.75 Aligned_cols=240 Identities=17% Similarity=0.218 Sum_probs=143.5
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhH
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 107 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg 107 (313)
|+|||+||+++++..|..++..|.+ +|+|+++|+||||.|+.. ..+++.++++++.+++ .++++++||||||
T Consensus 5 ~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~---~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg 76 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF---GPLSLADAAEAIAAQA----PDPAIWLGWSLGG 76 (245)
T ss_pred ceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC---CCcCHHHHHHHHHHhC----CCCeEEEEEcHHH
Confidence 7999999999999999999988864 799999999999998653 3468888888877654 2689999999999
Q ss_pred HHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHHHhhhcCCCCCCCC
Q 021382 108 LTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIPIAP 187 (313)
Q Consensus 108 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (313)
.+++.+|.++|++++++|++++.........+..... ......+... ... ............ .........
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~-~~~~~~~~~~~~-~~~~~~~~~ 147 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIK-PDVLTGFQQQ------LSD-DYQRTIERFLAL-QTLGTPTAR 147 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcccccCCcccccCC-HHHHHHHHHH------hhh-hHHHHHHHHHHH-HHhcCCccc
Confidence 9999999999999999999875322111000000000 0000000000 000 000001110000 000000000
Q ss_pred c-hhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEEEEeeCCCcCCCCCCch
Q 021382 188 E-NKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPGIE 266 (313)
Q Consensus 188 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~ 266 (313)
. ...+...+... ..+ ....+......+ ... .......++++|+++|+|++|.+++.+..
T Consensus 148 ~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~-------------~~~--~~~~~l~~i~~Pvlii~g~~D~~~~~~~~- 207 (245)
T TIGR01738 148 QDARALKQTLLAR-PTP---NVQVLQAGLEIL-------------ATV--DLRQPLQNISVPFLRLYGYLDGLVPAKVV- 207 (245)
T ss_pred hHHHHHHHHhhcc-CCC---CHHHHHHHHHHh-------------hcc--cHHHHHhcCCCCEEEEeecCCcccCHHHH-
Confidence 0 00000000000 000 000010000000 000 00011237899999999999999875432
Q ss_pred hhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHh
Q 021382 267 DYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFL 309 (313)
Q Consensus 267 ~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl 309 (313)
+.+++.+|+++++.++++||++++|+|++|++.|.+|+
T Consensus 208 -----~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 208 -----PYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred -----HHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 34667889999999999999999999999999999996
No 31
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1e-29 Score=211.93 Aligned_cols=123 Identities=23% Similarity=0.370 Sum_probs=100.8
Q ss_pred eeeee-CCEEEEEEecCCC-CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCC--CCCcHHHH
Q 021382 7 KFIKV-QGLNLHIAEAGAD-ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP--EKTSFQDM 82 (313)
Q Consensus 7 ~~~~~-~g~~i~~~~~g~~-~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~ 82 (313)
+++.+ ++..++.....+. .++.|+|||||++.+...|-..++.|++ .++|+++|+||+|+|++|.=. ..-....+
T Consensus 68 ~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~f 146 (365)
T KOG4409|consen 68 KYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEF 146 (365)
T ss_pred eeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHH
Confidence 44555 4444544443332 3578999999999999999888999976 799999999999999987321 22344579
Q ss_pred HHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 83 ~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
++-|++.....|++|.+|+||||||++|..||++||++|+.|+|+++.
T Consensus 147 vesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 147 VESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred HHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 999999999999999999999999999999999999999999999854
No 32
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=4.9e-30 Score=225.15 Aligned_cols=122 Identities=18% Similarity=0.318 Sum_probs=98.9
Q ss_pred eeeeCCEEEEEEecCCC---CCCcEEEEECCCCCch-hhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 021382 8 FIKVQGLNLHIAEAGAD---ADAHVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 83 (313)
Q Consensus 8 ~~~~~g~~i~~~~~g~~---~~~~~ivllHG~~~~~-~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (313)
+...+|.+|+|+.+++. +.+++|||+||++.+. ..|......|...||+|+++|+||||.|+.+.. ...+++.++
T Consensus 37 ~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~ 115 (330)
T PLN02298 37 FTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVDLVV 115 (330)
T ss_pred EEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHHHHH
Confidence 34459999999876542 2345799999998654 245556667877799999999999999975432 346899999
Q ss_pred HHHHHHHHHhCC------CeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 84 DDLLAILDHLGL------AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 84 ~di~~~~~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+|+.++++.++. .+++|+||||||++++.++..+|++|+++|++++.
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 168 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPM 168 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccc
Confidence 999999998853 36999999999999999999999999999998754
No 33
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=4e-31 Score=218.29 Aligned_cols=101 Identities=41% Similarity=0.644 Sum_probs=92.3
Q ss_pred EEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHH
Q 021382 30 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALT 109 (313)
Q Consensus 30 ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~i 109 (313)
|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+.....++++++++|+.+++++++.++++++||||||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999884 699999999999999987654346899999999999999999999999999999999
Q ss_pred HHHHHHhcccccceeeEecCCC
Q 021382 110 AYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 110 a~~~a~~~p~~v~~lvl~~~~~ 131 (313)
++.++.++|++|+++|+++++.
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPP 101 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESS
T ss_pred ccccccccccccccceeecccc
Confidence 9999999999999999998653
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=3e-29 Score=224.47 Aligned_cols=115 Identities=24% Similarity=0.340 Sum_probs=93.5
Q ss_pred EEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCC---CcHHHHHHHHHHHHH
Q 021382 15 NLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEK---TSFQDMVDDLLAILD 91 (313)
Q Consensus 15 ~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~di~~~~~ 91 (313)
++++......+++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+..... ...+.+++++.++++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 55554443334578999999999999899888888865 69999999999999986532100 112346788889999
Q ss_pred HhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 92 HLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 92 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.+++++++|+||||||.+++.+|.++|++|+++|++++.
T Consensus 172 ~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 172 AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 999999999999999999999999999999999998754
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=8.3e-30 Score=213.46 Aligned_cols=247 Identities=26% Similarity=0.428 Sum_probs=151.3
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH-HHHHHHHhCCCeEEEEEeCh
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD-LLAILDHLGLAKVFLVAKDF 105 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d-i~~~~~~l~~~~~~lvGhS~ 105 (313)
+|+|||+||++++...|..+++.|. .+|+|+++|+||||.|+.+.....+++++++++ +..+++.++.++++++||||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 3789999999999999999999887 689999999999999987654456899999999 88899999999999999999
Q ss_pred hHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHHHh--hhcCCCC
Q 021382 106 GALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYI--LFSRSEI 183 (313)
Q Consensus 106 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 183 (313)
||.+++.+|.++|+++++++++++........... ..+.........+............+. .+.. ..
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 149 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERA---------ARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFAS-QK 149 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhh---------hhhhcchhhhhHHHhcCccHHHHHHhcCceeee-cc
Confidence 99999999999999999999987542211110000 000000000000000000011111000 0000 00
Q ss_pred CCCCch-hhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEEEEeeCCCcCCCC
Q 021382 184 PIAPEN-KEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKF 262 (313)
Q Consensus 184 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~ 262 (313)
...... ..+...... . ........ +..... . . .........++++|+++|+|++|..++
T Consensus 150 ~~~~~~~~~~~~~~~~-----~--~~~~~~~~---~~~~~~--~------~-~~~~~~~~~~~~~P~l~i~g~~D~~~~- 209 (251)
T TIGR03695 150 NLPPEQRQALRAKRLA-----N--NPEGLAKM---LRATGL--G------K-QPSLWPKLQALTIPVLYLCGEKDEKFV- 209 (251)
T ss_pred cCChHHhHHHHHhccc-----c--cchHHHHH---HHHhhh--h------c-ccchHHHhhCCCCceEEEeeCcchHHH-
Confidence 000000 000000000 0 00000000 000000 0 0 000001123689999999999997652
Q ss_pred CCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 263 PGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
+ ..+.+++..|++++++++++||++++|+|+++++.|.+|+.
T Consensus 210 ~------~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 210 Q------IAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred H------HHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 1 12346778899999999999999999999999999999984
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=4.2e-29 Score=222.80 Aligned_cols=258 Identities=23% Similarity=0.376 Sum_probs=163.4
Q ss_pred eeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 021382 7 KFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDL 86 (313)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di 86 (313)
..+..++.+++|...|+ +++++|||+||++++...|..++..|.. +|+|+++|+||||.|.... ..+++.++++++
T Consensus 112 ~~~~~~~~~i~~~~~g~-~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~ 187 (371)
T PRK14875 112 RKARIGGRTVRYLRLGE-GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAV--GAGSLDELAAAV 187 (371)
T ss_pred CcceEcCcEEEEecccC-CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 45667888999988876 4578999999999999999998888865 6999999999999996443 357899999999
Q ss_pred HHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCc
Q 021382 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLD 166 (313)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (313)
.++++.++.++++++||||||.+++.+|..+|+++.++|+++++...... ... +...+...... ..
T Consensus 188 ~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~-------~~~-~~~~~~~~~~~------~~ 253 (371)
T PRK14875 188 LAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEI-------NGD-YIDGFVAAESR------RE 253 (371)
T ss_pred HHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCccc-------chh-HHHHhhcccch------hH
Confidence 99999999999999999999999999999999999999998754221000 000 00011000000 00
Q ss_pred HHHHHHHHHhhhcCCCCCCCCchhhhhh-cccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCcc
Q 021382 167 AKTVVRNIYILFSRSEIPIAPENKEIMD-LVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTV 245 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 245 (313)
....+.. .+.... ... ..+.+ .+.... . .. ....+..+.... +...... ........++
T Consensus 254 ~~~~~~~---~~~~~~-~~~---~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~----~~~~~~~------~~~~~~l~~i 313 (371)
T PRK14875 254 LKPVLEL---LFADPA-LVT---RQMVEDLLKYKR-L-DG-VDDALRALADAL----FAGGRQR------VDLRDRLASL 313 (371)
T ss_pred HHHHHHH---HhcChh-hCC---HHHHHHHHHHhc-c-cc-HHHHHHHHHHHh----ccCcccc------hhHHHHHhcC
Confidence 0000111 000000 000 00000 000000 0 00 000011110000 0000000 0000112368
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
++|+++++|++|.+++... .++..+++++.+++++||++++|+|+++++.|.+||.+
T Consensus 314 ~~Pvlii~g~~D~~vp~~~---------~~~l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 314 AIPVLVIWGEQDRIIPAAH---------AQGLPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCEEEEEECCCCccCHHH---------HhhccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 9999999999999887532 12234578999999999999999999999999999975
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=1.8e-29 Score=219.14 Aligned_cols=126 Identities=26% Similarity=0.376 Sum_probs=104.9
Q ss_pred ccceeeee-CCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHH
Q 021382 4 IEHKFIKV-QGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 82 (313)
Q Consensus 4 ~~~~~~~~-~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (313)
....+++. +|.+++|...|+ ++++||||+||++++...| .....+...+|+||++|+||||.|+.+.....++..++
T Consensus 4 ~~~~~~~~~~~~~l~y~~~g~-~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 4 FVSGYLNVSDNHQLYYEQSGN-PDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred ccCCeEEcCCCcEEEEEECcC-CCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 45566776 689999999885 4578999999998876554 33444444579999999999999986543345788999
Q ss_pred HHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 83 ~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
++|+..+++.+++++++++||||||.+++.++.++|++++++|++++..
T Consensus 82 ~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 82 VADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 9999999999999999999999999999999999999999999988643
No 38
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=1e-28 Score=232.79 Aligned_cols=121 Identities=25% Similarity=0.489 Sum_probs=103.4
Q ss_pred ceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH
Q 021382 6 HKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 85 (313)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 85 (313)
..+++.+|.+|+|...|+ +++|+|||+|||++++..|+.+++.| .++|+|+++|+||||.|+.+.....|++.++++|
T Consensus 5 ~~~~~~~g~~l~~~~~g~-~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 82 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD-PDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADD 82 (582)
T ss_pred EEEEeeCCEEEEEEEcCC-CCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHH
Confidence 456778999999999986 45789999999999999999999888 5689999999999999987654457899999999
Q ss_pred HHHHHHHhCCCe-EEEEEeChhHHHHHHHHHh--cccccceeeEec
Q 021382 86 LLAILDHLGLAK-VFLVAKDFGALTAYMFAIQ--HQERVSGVITLG 128 (313)
Q Consensus 86 i~~~~~~l~~~~-~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~ 128 (313)
+.++++.+++.+ ++|+||||||.+++.++.. .|+++.+++.++
T Consensus 83 l~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 83 FAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred HHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 999999999876 9999999999999988876 345665555544
No 39
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=7.5e-29 Score=252.76 Aligned_cols=113 Identities=27% Similarity=0.436 Sum_probs=98.7
Q ss_pred EEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCC------CCCCcHHHHHHHHHHH
Q 021382 16 LHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE------PEKTSFQDMVDDLLAI 89 (313)
Q Consensus 16 i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~di~~~ 89 (313)
++|...|+.+++++|||+|||+++...|..++..|.+ +|+||++|+||||.|+.+.. ...++++.+++++.++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 4555666534578999999999999999999988864 79999999999999975421 2357899999999999
Q ss_pred HHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 90 LDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 90 ~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
++.+++++++|+||||||.+++.+|.++|++|+++|++++
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 9999999999999999999999999999999999999874
No 40
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=4.2e-27 Score=209.11 Aligned_cols=117 Identities=20% Similarity=0.226 Sum_probs=96.6
Q ss_pred CCEEEEEEecCCC--CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 021382 12 QGLNLHIAEAGAD--ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAI 89 (313)
Q Consensus 12 ~g~~i~~~~~g~~--~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~ 89 (313)
++..+++..+.+. +..++|||+||++++...|..++..|.+.||+|+++|+||||.|+... ...++++.+++|+.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~-~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH-GYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-CCCcCHHHHHHHHHHH
Confidence 6678888877652 234689999999999989999999998889999999999999997643 2346888999999999
Q ss_pred HHHhCC----CeEEEEEeChhHHHHHHHHHhccc---ccceeeEecCC
Q 021382 90 LDHLGL----AKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVP 130 (313)
Q Consensus 90 ~~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 130 (313)
++.++. .+++++||||||.+++.++. +|+ +++++|+.++.
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~ 244 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPA 244 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcc
Confidence 998853 37999999999999997764 664 89999998653
No 41
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=2.7e-26 Score=196.59 Aligned_cols=128 Identities=28% Similarity=0.379 Sum_probs=108.1
Q ss_pred cceeeeeCCEEEEEEecCCCC-CCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 021382 5 EHKFIKVQGLNLHIAEAGADA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 83 (313)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~-~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (313)
+..+...+|..++|...-... ...+||++||+.+++..|.+++..|...||.|+++|+||||.|.....+..-+++++.
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~ 90 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYV 90 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHH
Confidence 345667799999998876432 2258999999999999999999999999999999999999999732223445699999
Q ss_pred HHHHHHHHHhCC----CeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCC
Q 021382 84 DDLLAILDHLGL----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (313)
Q Consensus 84 ~di~~~~~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (313)
+|+.++++.... .+++++||||||.|++.++.+++.++.++||+++...
T Consensus 91 ~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~ 143 (298)
T COG2267 91 DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALG 143 (298)
T ss_pred HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECcccc
Confidence 999999999853 5899999999999999999999999999999875443
No 42
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.95 E-value=2.3e-27 Score=182.10 Aligned_cols=248 Identities=21% Similarity=0.297 Sum_probs=164.2
Q ss_pred cceeeeeCCEEEEEEecCCCCCCcEEEEECCCCCc-hhhHHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHH-
Q 021382 5 EHKFIKVQGLNLHIAEAGADADAHVVVFLHGFPEI-WYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQD- 81 (313)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~-~~~w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~- 81 (313)
+++.+.++|.+|+|..+|.. .-.|+++.|.-+| ..+|.+++..|.+ ..+.+|++|.||||.|.+|. ....++.
T Consensus 22 te~kv~vng~ql~y~~~G~G--~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~--Rkf~~~ff 97 (277)
T KOG2984|consen 22 TESKVHVNGTQLGYCKYGHG--PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE--RKFEVQFF 97 (277)
T ss_pred hhheeeecCceeeeeecCCC--CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc--ccchHHHH
Confidence 34567789999999999982 1279999999665 5679998877754 34899999999999997663 3344443
Q ss_pred --HHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC-CCCCChh-hHhhhcCchhhHHhhcCcch
Q 021382 82 --MVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP-ILPPGPI-EFHKYLPEGFYISRWQEPGR 157 (313)
Q Consensus 82 --~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (313)
=+++...+|++|..++|.++|+|=||..|+..|+++++.|.++++.++. +...... .+.. + .-+..|....+
T Consensus 98 ~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kg-i---Rdv~kWs~r~R 173 (277)
T KOG2984|consen 98 MKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKG-I---RDVNKWSARGR 173 (277)
T ss_pred HHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhc-h---HHHhhhhhhhc
Confidence 3566677999999999999999999999999999999999999998743 3221110 1100 0 00122221100
Q ss_pred hhhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCccccccccc
Q 021382 158 AEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEK 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+ .. ...| +.. .+....+++.+ .+.++... ++ .+ -
T Consensus 174 -----~--P~----e~~Y----g~e-~f~~~wa~wvD---------------~v~qf~~~---~d----G~--------f 207 (277)
T KOG2984|consen 174 -----Q--PY----EDHY----GPE-TFRTQWAAWVD---------------VVDQFHSF---CD----GR--------F 207 (277)
T ss_pred -----c--hH----HHhc----CHH-HHHHHHHHHHH---------------HHHHHhhc---CC----Cc--------h
Confidence 0 00 0000 000 00000011111 11111111 10 00 0
Q ss_pred ccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhhc
Q 021382 238 FSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 312 (313)
Q Consensus 238 ~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~~ 312 (313)
+....++++||+||++|+.|+.++.+.+ -.+....+.+++++++.++|..|+.-|++||..+.+||.++
T Consensus 208 Cr~~lp~vkcPtli~hG~kDp~~~~~hv------~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 208 CRLVLPQVKCPTLIMHGGKDPFCGDPHV------CFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred HhhhcccccCCeeEeeCCcCCCCCCCCc------cchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 2234468999999999999999975543 23556778999999999999999999999999999999753
No 43
>PLN02511 hydrolase
Probab=99.95 E-value=1.2e-26 Score=206.86 Aligned_cols=264 Identities=20% Similarity=0.289 Sum_probs=149.6
Q ss_pred CCEEEEEEec-----CCCCCCcEEEEECCCCCchhh-H-HHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHH
Q 021382 12 QGLNLHIAEA-----GADADAHVVVFLHGFPEIWYS-W-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (313)
Q Consensus 12 ~g~~i~~~~~-----g~~~~~~~ivllHG~~~~~~~-w-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (313)
||..+.+--. ....++|+|||+||+.+++.. | ..++..+.++||+|+++|+||||.|.... . .+....+++
T Consensus 80 DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~-~-~~~~~~~~~ 157 (388)
T PLN02511 80 DGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT-P-QFYSASFTG 157 (388)
T ss_pred CCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC-c-CEEcCCchH
Confidence 7777765211 111347899999999876643 5 44556666789999999999999997532 2 223356788
Q ss_pred HHHHHHHHhCC----CeEEEEEeChhHHHHHHHHHhcccc--cceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchh
Q 021382 85 DLLAILDHLGL----AKVFLVAKDFGALTAYMFAIQHQER--VSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRA 158 (313)
Q Consensus 85 di~~~~~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (313)
|+.++++.++. .+++++||||||++++.|+..+|++ +.++++++++... ......+..+.. ..+.
T Consensus 158 Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l---~~~~~~~~~~~~-~~y~----- 228 (388)
T PLN02511 158 DLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL---VIADEDFHKGFN-NVYD----- 228 (388)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH---HHHHHHHhccHH-HHHH-----
Confidence 89888888865 5899999999999999999999987 8888877654321 000000000000 0000
Q ss_pred hhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccC--CCCCCCCcccccccc
Q 021382 159 EADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKS--GFRTALQVPYRSIHE 236 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 236 (313)
..+.. .......+....+... .......... ... + +..+...+... ++...... |+..
T Consensus 229 -~~~~~-~l~~~~~~~~~~~~~~--~~~~~~~~~~----~~~------~---~~~fd~~~t~~~~gf~~~~~y-y~~~-- 288 (388)
T PLN02511 229 -KALAK-ALRKIFAKHALLFEGL--GGEYNIPLVA----NAK------T---VRDFDDGLTRVSFGFKSVDAY-YSNS-- 288 (388)
T ss_pred -HHHHH-HHHHHHHHHHHHHhhC--CCccCHHHHH----hCC------C---HHHHHHhhhhhcCCCCCHHHH-HHHc--
Confidence 00000 0000000000000000 0000000000 000 0 11111111111 11100000 1110
Q ss_pred cccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhH------HHHHHHHHhh
Q 021382 237 KFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEE------VNQLVLTFLN 310 (313)
Q Consensus 237 ~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~------~~~~i~~fl~ 310 (313)
.......+|++|+|+|+|++|++++..... ..+.+.+|+++++++++|||++++|+|+. +++.|.+||.
T Consensus 289 s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~-----~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 289 SSSDSIKHVRVPLLCIQAANDPIAPARGIP-----REDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred CchhhhccCCCCeEEEEcCCCCcCCcccCc-----HhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHH
Confidence 111223479999999999999998764321 12445789999999999999999999987 4899999996
Q ss_pred h
Q 021382 311 K 311 (313)
Q Consensus 311 ~ 311 (313)
.
T Consensus 364 ~ 364 (388)
T PLN02511 364 A 364 (388)
T ss_pred H
Confidence 3
No 44
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=2.2e-26 Score=203.67 Aligned_cols=119 Identities=16% Similarity=0.266 Sum_probs=96.3
Q ss_pred CCEEEEEEecCC-CC-CCcEEEEECCCCCchhh-------------HHHHHH---HHHHCCCEEEeeCCCCCCCCCCC--
Q 021382 12 QGLNLHIAEAGA-DA-DAHVVVFLHGFPEIWYS-------------WRHQMV---GVATAGFRAIAPDCRGYGLSDPP-- 71 (313)
Q Consensus 12 ~g~~i~~~~~g~-~~-~~~~ivllHG~~~~~~~-------------w~~~~~---~l~~~~~~vi~~D~~G~G~S~~~-- 71 (313)
+..+|+|+.+|+ .+ ..++||++|++.++++. |..++. .|...+|.||++|..|-|.|+.|
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 678999999996 12 24689999999886532 766553 34445799999999998764322
Q ss_pred ---------C--------CCCCCcHHHHHHHHHHHHHHhCCCeEE-EEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 72 ---------A--------EPEKTSFQDMVDDLLAILDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 72 ---------~--------~~~~~~~~~~~~di~~~~~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+ +...+|+.++++++.++++++++++++ ++||||||++++.+|.+||++|+++|++++.
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 1 123489999999999999999999987 9999999999999999999999999999754
No 45
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=4.6e-26 Score=189.83 Aligned_cols=245 Identities=21% Similarity=0.309 Sum_probs=153.7
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC----CCeEEE
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG----LAKVFL 100 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~----~~~~~l 100 (313)
..||++++||+.++..+|+.+...|.. .+..|++.|+|.||.|.+.. .+++..+++|+..||+..+ ..++.+
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 479999999999999999998888864 35789999999999997543 4578899999999999985 668999
Q ss_pred EEeChhH-HHHHHHHHhcccccceeeEecCCCCC--CChhhHhhhcCchhhHHhhcCcc--------hhhhhccCCcHHH
Q 021382 101 VAKDFGA-LTAYMFAIQHQERVSGVITLGVPILP--PGPIEFHKYLPEGFYISRWQEPG--------RAEADFGRLDAKT 169 (313)
Q Consensus 101 vGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 169 (313)
+|||||| .+++.++..+|+.+.++++++.++.. .........+ ......+.. ...+.+.......
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i----~~m~~~d~~~~~~~~rke~~~~l~~~~~d~ 203 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELI----KAMIQLDLSIGVSRGRKEALKSLIEVGFDN 203 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHH----HHHHhccccccccccHHHHHHHHHHHhcch
Confidence 9999999 88888889999999999998744311 1111110000 000000000 0000010000001
Q ss_pred HHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCC-CCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCc
Q 021382 170 VVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPW-FTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVP 248 (313)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 248 (313)
..+. +.. ++.. + . .......| ..-+.+..+...+.... |.. .......+.|
T Consensus 204 ~~~~-fi~-~nl~-~-~-----------~~~~s~~w~~nl~~i~~~~~~~~~~s--------~~~-----~l~~~~~~~p 255 (315)
T KOG2382|consen 204 LVRQ-FIL-TNLK-K-S-----------PSDGSFLWRVNLDSIASLLDEYEILS--------YWA-----DLEDGPYTGP 255 (315)
T ss_pred HHHH-HHH-HhcC-c-C-----------CCCCceEEEeCHHHHHHHHHHHHhhc--------ccc-----cccccccccc
Confidence 1111 100 0000 0 0 00000011 11122222111110000 100 1111356789
Q ss_pred EEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 249 ALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 249 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
|+++.|.++..++.+. ...+++.+|+++++.+++||||+|.|+|++|.+.|.+|+..
T Consensus 256 vlfi~g~~S~fv~~~~------~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 256 VLFIKGLQSKFVPDEH------YPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred eeEEecCCCCCcChhH------HHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 9999999999997542 23578899999999999999999999999999999999864
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.92 E-value=7.8e-24 Score=185.19 Aligned_cols=122 Identities=17% Similarity=0.276 Sum_probs=94.3
Q ss_pred eeeCCEEEEEEecCCCCCCcEEEEECCCCCchh-hH-------------------------HHHHHHHHHCCCEEEeeCC
Q 021382 9 IKVQGLNLHIAEAGADADAHVVVFLHGFPEIWY-SW-------------------------RHQMVGVATAGFRAIAPDC 62 (313)
Q Consensus 9 ~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~-~w-------------------------~~~~~~l~~~~~~vi~~D~ 62 (313)
.+.+|.+|+++.+.++..+.+|+++||+++++. .+ ..+++.|.+.||+|+++|+
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc
Confidence 345899999888754333458999999999885 21 3467888888999999999
Q ss_pred CCCCCCCCCCC--CCCCcHHHHHHHHHHHHHHhC------------------------CCeEEEEEeChhHHHHHHHHHh
Q 021382 63 RGYGLSDPPAE--PEKTSFQDMVDDLLAILDHLG------------------------LAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 63 ~G~G~S~~~~~--~~~~~~~~~~~di~~~~~~l~------------------------~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
||||.|+.... ....+++++++|+.++++... -.+++|+||||||.+++.+++.
T Consensus 83 rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 83 QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 99999975422 112489999999999998742 2379999999999999999987
Q ss_pred ccc--------ccceeeEecCC
Q 021382 117 HQE--------RVSGVITLGVP 130 (313)
Q Consensus 117 ~p~--------~v~~lvl~~~~ 130 (313)
+++ .++++|++++.
T Consensus 163 ~~~~~~~~~~~~i~g~i~~s~~ 184 (332)
T TIGR01607 163 LGKSNENNDKLNIKGCISLSGM 184 (332)
T ss_pred hccccccccccccceEEEeccc
Confidence 643 58888876643
No 47
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.92 E-value=4e-23 Score=176.27 Aligned_cols=117 Identities=22% Similarity=0.261 Sum_probs=89.1
Q ss_pred eeeCCEEEEE-EecCCCCCCcEEEEECCCCC----chhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 021382 9 IKVQGLNLHI-AEAGADADAHVVVFLHGFPE----IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 83 (313)
Q Consensus 9 ~~~~g~~i~~-~~~g~~~~~~~ivllHG~~~----~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (313)
+..+|..+.- ...+..+++++||++||+++ +...|..+++.|.+.||+|+++|+||||.|+.. .+++.++.
T Consensus 7 ~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~----~~~~~~~~ 82 (274)
T TIGR03100 7 FSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE----NLGFEGID 82 (274)
T ss_pred EEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC----CCCHHHHH
Confidence 4456666542 33332234568999998874 334466677888888999999999999998632 24677888
Q ss_pred HHHHHHHHHh-----CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 84 DDLLAILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 84 ~di~~~~~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|++++.
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~ 133 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPW 133 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCc
Confidence 8888888887 67789999999999999999875 5689999999854
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.91 E-value=1.5e-22 Score=176.99 Aligned_cols=119 Identities=14% Similarity=0.156 Sum_probs=82.7
Q ss_pred CCEEEEEE--ecCC-CCCCcEEEEECCCCCchhh--HHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCC---cHHHHH
Q 021382 12 QGLNLHIA--EAGA-DADAHVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKT---SFQDMV 83 (313)
Q Consensus 12 ~g~~i~~~--~~g~-~~~~~~ivllHG~~~~~~~--w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~---~~~~~~ 83 (313)
||..+.+. ..++ .+++|+||++||+++++.. +..++..|.+.||+|+++|+||||.|.... ...| ...++.
T Consensus 40 dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~-~~~~~~~~~~D~~ 118 (324)
T PRK10985 40 DGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL-HRIYHSGETEDAR 118 (324)
T ss_pred CCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC-cceECCCchHHHH
Confidence 66665432 2221 1246899999999887544 345778888889999999999999874321 1122 233433
Q ss_pred HHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccc--cceeeEecCCC
Q 021382 84 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQER--VSGVITLGVPI 131 (313)
Q Consensus 84 ~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~ 131 (313)
..+..+.++++.++++++||||||.++..+++.+++. +.++|+++++.
T Consensus 119 ~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~ 168 (324)
T PRK10985 119 FFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPL 168 (324)
T ss_pred HHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCC
Confidence 3333444456778999999999999999888887654 88999888654
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.90 E-value=2.2e-22 Score=180.34 Aligned_cols=230 Identities=16% Similarity=0.098 Sum_probs=140.3
Q ss_pred CCEEEEEEecCC--CCCCcEEEEECCCCCch-hhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 021382 12 QGLNLHIAEAGA--DADAHVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 88 (313)
Q Consensus 12 ~g~~i~~~~~g~--~~~~~~ivllHG~~~~~-~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~ 88 (313)
+|.+|.....-+ ++..|+||+.||+.+.. ..|..++..|++.||+|+++|+||||.|...+ .......+.+.+.+
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~~~~avld 254 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSLLHQAVLN 254 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHHHHHHHHH
Confidence 454666543322 12345566555555543 46877788888889999999999999996432 12344455566777
Q ss_pred HHHHh---CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCC
Q 021382 89 ILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRL 165 (313)
Q Consensus 89 ~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (313)
.+... +.+++.++||||||.+++++|..+|++++++|+++++... + .... ..+.. ....
T Consensus 255 ~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~-----~---~~~~---~~~~~-------~p~~ 316 (414)
T PRK05077 255 ALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHT-----L---LTDP---KRQQQ-------VPEM 316 (414)
T ss_pred HHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccch-----h---hcch---hhhhh-------chHH
Confidence 77665 5578999999999999999999999999999998764321 0 0000 00000 0000
Q ss_pred cHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCcc
Q 021382 166 DAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTV 245 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 245 (313)
....+.. .+... ....+.+......+ .+. .......++
T Consensus 317 -~~~~la~---~lg~~-----------------------~~~~~~l~~~l~~~-------sl~--------~~~~l~~~i 354 (414)
T PRK05077 317 -YLDVLAS---RLGMH-----------------------DASDEALRVELNRY-------SLK--------VQGLLGRRC 354 (414)
T ss_pred -HHHHHHH---HhCCC-----------------------CCChHHHHHHhhhc-------cch--------hhhhhccCC
Confidence 0000000 00000 00011111110000 000 000011368
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhhc
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKH 312 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~~ 312 (313)
++|+|+|+|++|+++|.... +.+.+..|+++++.+|++ ++.|.|+++++.|.+||.+.
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a------~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDS------RLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CCcEEEEecCCCCCCCHHHH------HHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 99999999999999986432 345677899999999986 67789999999999999763
No 50
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.90 E-value=1.5e-22 Score=166.16 Aligned_cols=121 Identities=24% Similarity=0.348 Sum_probs=99.3
Q ss_pred eee-eCCEEEEEEecCCC---CCCcEEEEECCCCCch-hhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHH
Q 021382 8 FIK-VQGLNLHIAEAGAD---ADAHVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDM 82 (313)
Q Consensus 8 ~~~-~~g~~i~~~~~g~~---~~~~~ivllHG~~~~~-~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (313)
+++ .+|..++...+-+. +.+-.|+++||+++++ ..|...+..|+..||-|+++|++|||+|+.. .....+++.+
T Consensus 31 ~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl-~~yi~~~d~~ 109 (313)
T KOG1455|consen 31 FFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL-HAYVPSFDLV 109 (313)
T ss_pred eEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC-cccCCcHHHH
Confidence 444 48889998877542 2234799999998865 6677778889889999999999999999854 2345689999
Q ss_pred HHHHHHHHHHh------CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 83 VDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 83 ~~di~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
++|+..+.+.. ...+..+.||||||.|++.++.+.|+...++|++++
T Consensus 110 v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaP 162 (313)
T KOG1455|consen 110 VDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAP 162 (313)
T ss_pred HHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeec
Confidence 99999999864 234799999999999999999999999999999863
No 51
>PLN02872 triacylglycerol lipase
Probab=99.90 E-value=1.9e-22 Score=178.64 Aligned_cols=294 Identities=15% Similarity=0.169 Sum_probs=161.1
Q ss_pred cccceeeee-CCEEEEEEecCCC------CCCcEEEEECCCCCchhhHH------HHHHHHHHCCCEEEeeCCCCCCCCC
Q 021382 3 QIEHKFIKV-QGLNLHIAEAGAD------ADAHVVVFLHGFPEIWYSWR------HQMVGVATAGFRAIAPDCRGYGLSD 69 (313)
Q Consensus 3 ~~~~~~~~~-~g~~i~~~~~g~~------~~~~~ivllHG~~~~~~~w~------~~~~~l~~~~~~vi~~D~~G~G~S~ 69 (313)
+.+...+++ ||..+......+. ..+|+|+|+||+..++..|. .+...|++.||+|+++|+||+|.|.
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 345555655 8999988764311 23689999999998888883 2333566779999999999988653
Q ss_pred C----C---CCCCCCcHHHHH-HHHHHHHHHh---CCCeEEEEEeChhHHHHHHHHHhccc---ccceeeEecCCCCCC-
Q 021382 70 P----P---AEPEKTSFQDMV-DDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVPILPP- 134 (313)
Q Consensus 70 ~----~---~~~~~~~~~~~~-~di~~~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~- 134 (313)
. . .....+++++++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+ +|++++++++.....
T Consensus 123 gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~ 201 (395)
T PLN02872 123 GHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDH 201 (395)
T ss_pred CCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhcc
Confidence 2 1 111257899999 8999999986 347999999999999998544 6786 677777766432111
Q ss_pred ChhhHhhhcCchhhHHhhcCcchhhhhcc-CCc-HHHHHH----------HHHhhhcCCCCCCCCchhhhhhcccCCCCC
Q 021382 135 GPIEFHKYLPEGFYISRWQEPGRAEADFG-RLD-AKTVVR----------NIYILFSRSEIPIAPENKEIMDLVSDSTPL 202 (313)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (313)
....+...+... ....+... -....+. ... ...... .....+.+.+... +...+-.++. ..
T Consensus 202 ~~~~~~~~~~~~-~~~~~~~~-~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~--n~~~~~~~~~---~~ 274 (395)
T PLN02872 202 VTAPLVLRMVFM-HLDQMVVA-MGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCF--NASRIDYYLE---YE 274 (395)
T ss_pred CCCHHHHHHHHH-hHHHHHHH-hcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCccc--chhhhhHHHh---cC
Confidence 111110000000 00000000 0000000 000 000000 0000111111010 0111101111 11
Q ss_pred CCCCCHHHHHHHHHHhccCCC---CCCC--Ccc-cccccccccCCCCcc--CCcEEEEeeCCCcCCCCCCchhhhhcccc
Q 021382 203 PPWFTEEDLAAYGALYEKSGF---RTAL--QVP-YRSIHEKFSLPELTV--KVPALLILGEKDYFLKFPGIEDYIRSGKV 274 (313)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~-~~~~~~~~~~~~~~i--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 274 (313)
|...+-..+..+.+......| +... +.. |.... ...-...++ ++|+++++|++|.++++..+. .+
T Consensus 275 pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~-pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~------~l 347 (395)
T PLN02872 275 PHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVN-PPAFDLSLIPKSLPLWMGYGGTDGLADVTDVE------HT 347 (395)
T ss_pred CCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCC-CCCcCcccCCCCccEEEEEcCCCCCCCHHHHH------HH
Confidence 223344455555555443322 2111 110 11100 011122355 689999999999998754332 34
Q ss_pred cccCCC-ceEEEeCCCCCC---ccccChhHHHHHHHHHhhh
Q 021382 275 KDFVPN-LEIIRLSEGSHF---VQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 275 ~~~~p~-~~~~~i~~~gH~---~~~e~pe~~~~~i~~fl~~ 311 (313)
.+.+|+ .+++.++++||. ...|.|+++++.|.+|+.+
T Consensus 348 ~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~ 388 (395)
T PLN02872 348 LAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRS 388 (395)
T ss_pred HHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHH
Confidence 455565 688899999995 5569999999999999975
No 52
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.90 E-value=3.4e-22 Score=161.33 Aligned_cols=119 Identities=19% Similarity=0.313 Sum_probs=95.9
Q ss_pred eeeCCE--EEEEEecCC-CCCCcEEEEECCCCCchhhHHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHH
Q 021382 9 IKVQGL--NLHIAEAGA-DADAHVVVFLHGFPEIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (313)
Q Consensus 9 ~~~~g~--~i~~~~~g~-~~~~~~ivllHG~~~~~~~w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (313)
++++|. ++..+..++ .+.||.++|+||++.|..+|..+...|+. ...||+|+|+||||.|... +..+.+.+.++.
T Consensus 53 v~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~-~e~dlS~eT~~K 131 (343)
T KOG2564|consen 53 VSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVE-NEDDLSLETMSK 131 (343)
T ss_pred cccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccC-ChhhcCHHHHHH
Confidence 444444 355555554 44689999999999999999999988865 3578999999999999754 345789999999
Q ss_pred HHHHHHHHh---CCCeEEEEEeChhHHHHHHHHHhc--ccccceeeEecC
Q 021382 85 DLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQH--QERVSGVITLGV 129 (313)
Q Consensus 85 di~~~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~ 129 (313)
|+-++++++ ...+++||||||||.||...|... |. +.+++.++.
T Consensus 132 D~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 132 DFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred HHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 999999997 345799999999999998887643 65 889998874
No 53
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.89 E-value=3.5e-22 Score=181.79 Aligned_cols=256 Identities=15% Similarity=0.165 Sum_probs=148.3
Q ss_pred CCcEEEEECCCCCchhhHH-----HHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEE
Q 021382 26 DAHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFL 100 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~-----~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~l 100 (313)
.++|||++||+-.....|+ .++..|.+.||+|+++|+||+|.|.......+|..+.+.+.+..+++.+|.+++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~l 266 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNC 266 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEE
Confidence 4689999999988877775 57788888899999999999999876544456777778888888998899999999
Q ss_pred EEeChhHHHH----HHHHHhc-ccccceeeEecCCCCCCChhhHhhhcCchhh--HHhh------cCcchhhhhccCCcH
Q 021382 101 VAKDFGALTA----YMFAIQH-QERVSGVITLGVPILPPGPIEFHKYLPEGFY--ISRW------QEPGRAEADFGRLDA 167 (313)
Q Consensus 101 vGhS~Gg~ia----~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~ 167 (313)
+||||||.++ ..+++.+ |++++++++++++.....+..+..+...... +.+. .+.......|..+..
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp 346 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRE 346 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcCh
Confidence 9999999985 2356665 8899999999876543333222111111100 0000 000000111111111
Q ss_pred HHHHHHHHhh--hcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHH-HHhccCCCCCCCCcccccccccccCCCCc
Q 021382 168 KTVVRNIYIL--FSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYG-ALYEKSGFRTALQVPYRSIHEKFSLPELT 244 (313)
Q Consensus 168 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
...+-+.+.. +.+.. +. ..++..+....+. +.-.....|. ..+....+. ...+ . ..........
T Consensus 347 ~~l~w~~~v~~yl~g~~-~~---~fdll~Wn~D~t~----lP~~~~~~~lr~ly~~N~L~-~G~~--~--v~g~~~dL~~ 413 (532)
T TIGR01838 347 NDLIWNYYVDNYLKGKS-PV---PFDLLFWNSDSTN----LPGKMHNFYLRNLYLQNALT-TGGL--E--VCGVRLDLSK 413 (532)
T ss_pred hhHHHHHHHHHHhcCCC-cc---chhHHHHhccCcc----chHHHHHHHHHHHHhcCCCc-CCee--E--ECCEecchhh
Confidence 1111110100 00000 00 0011111111211 1222223332 222222211 1111 0 0011123357
Q ss_pred cCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhH
Q 021382 245 VKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEE 300 (313)
Q Consensus 245 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~ 300 (313)
|++|+++|+|++|.++|...+ ..+.+.+++.+.++++++||++++|+|..
T Consensus 414 I~vPvLvV~G~~D~IvP~~sa------~~l~~~i~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 414 VKVPVYIIATREDHIAPWQSA------YRGAALLGGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCCEEEEeeCCCCcCCHHHH------HHHHHHCCCCEEEEECCCCCchHhhCCCC
Confidence 999999999999999976433 23566788999999999999999999863
No 54
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=2.2e-22 Score=157.45 Aligned_cols=223 Identities=18% Similarity=0.207 Sum_probs=144.2
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh---CCCeEEEEEeC
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---GLAKVFLVAKD 104 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l---~~~~~~lvGhS 104 (313)
-+|||||||.++..+.+.+.+.|.+.||.|++|-+||||-.. .+.-.++..+|..|+.+-.+.| |-+.+.++|-|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~--e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLP--EDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCH--HHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 589999999999999999999999999999999999999863 2233568888888887766655 67899999999
Q ss_pred hhHHHHHHHHHhcccccceeeEecCCCCCCC-hhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHHHhhhcCCCC
Q 021382 105 FGALTAYMFAIQHQERVSGVITLGVPILPPG-PIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEI 183 (313)
Q Consensus 105 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (313)
|||.+|+.+|.++| ++++|.++++....+ ...++..+ .+..+. +.++..+.+. +.+.+..+
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l---~y~~~~-------kk~e~k~~e~-~~~e~~~~----- 155 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLL---EYFRNA-------KKYEGKDQEQ-IDKEMKSY----- 155 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHH---HHHHHh-------hhccCCCHHH-HHHHHHHh-----
Confidence 99999999999999 999999887654321 11111100 000000 0111111111 11101000
Q ss_pred CCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEEEEeeCCCcCCCCC
Q 021382 184 PIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFP 263 (313)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~ 263 (313)
. +.+ ....+.+..... ........|..|++++.|++|+.++..
T Consensus 156 -------------~-----~~~--~~~~~~~~~~i~-----------------~~~~~~~~I~~pt~vvq~~~D~mv~~~ 198 (243)
T COG1647 156 -------------K-----DTP--MTTTAQLKKLIK-----------------DARRSLDKIYSPTLVVQGRQDEMVPAE 198 (243)
T ss_pred -------------h-----cch--HHHHHHHHHHHH-----------------HHHhhhhhcccchhheecccCCCCCHH
Confidence 0 000 011112211111 000011268899999999999999865
Q ss_pred CchhhhhcccccccCCCceEEEeCCCCCCcccc-ChhHHHHHHHHHhhh
Q 021382 264 GIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQ-SPEEVNQLVLTFLNK 311 (313)
Q Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e-~pe~~~~~i~~fl~~ 311 (313)
.+.-.+ .......-++.+++++||.+-.+ +.|.+.+.|..||+.
T Consensus 199 sA~~Iy----~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 199 SANFIY----DHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHH----HhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 543221 12223357899999999965554 789999999999963
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=8.7e-21 Score=159.39 Aligned_cols=116 Identities=41% Similarity=0.674 Sum_probs=95.5
Q ss_pred eeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHC--CCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 021382 9 IKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATA--GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDL 86 (313)
Q Consensus 9 ~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di 86 (313)
....+..+.|...+.. +|+|+++||++++...|......+... .|+|+++|+||||.|. .. .++...+++++
T Consensus 5 ~~~~~~~~~~~~~~~~--~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~ 78 (282)
T COG0596 5 LAADGVRLAYREAGGG--GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSLSAYADDL 78 (282)
T ss_pred ccCCCeEEEEeecCCC--CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---cccHHHHHHHH
Confidence 3446677888877753 669999999999999998743334331 2899999999999997 11 34556669999
Q ss_pred HHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
..+++.++.++++++||||||.++..++.++|++++++|++++.
T Consensus 79 ~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 79 AALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred HHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 99999999999999999999999999999999999999998854
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=1.3e-23 Score=174.41 Aligned_cols=76 Identities=33% Similarity=0.541 Sum_probs=70.0
Q ss_pred CEEEeeCCCCCCCCCC--CCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 55 FRAIAPDCRGYGLSDP--PAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 55 ~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
|+|+++|+||+|.|++ ......|+..++++++..+++.+++++++++||||||++++.||+.+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7899999999999984 134568999999999999999999999999999999999999999999999999998753
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.87 E-value=4.7e-21 Score=154.09 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=73.1
Q ss_pred cEEEEECCCCCchhhHHHH-H-HHHHH--CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEe
Q 021382 28 HVVVFLHGFPEIWYSWRHQ-M-VGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAK 103 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~-~-~~l~~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGh 103 (313)
|+|||+|||+++..+|... + ..+.+ .+|+|+++|+|||| .++++++.++++++++++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 6899999999999999843 2 44433 26999999999984 357889999999999999999999
Q ss_pred ChhHHHHHHHHHhcccccceeeEecCC
Q 021382 104 DFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 104 S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
||||.+++.+|.++|. ++|+++++
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPA 92 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCC
Confidence 9999999999999993 35777754
No 58
>PRK10566 esterase; Provisional
Probab=99.87 E-value=1.8e-20 Score=158.01 Aligned_cols=101 Identities=21% Similarity=0.247 Sum_probs=73.4
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcH-------HHHHHHHHHHHHHh-----
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSF-------QDMVDDLLAILDHL----- 93 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~-------~~~~~di~~~~~~l----- 93 (313)
..|+||++||++++...|..+...|.+.||+|+++|+||||.|..... ..++ ....+|+.++++.+
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDE--ARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcc--ccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 368999999999998889888889988899999999999998642211 1111 11233443333332
Q ss_pred -CCCeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 94 -GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 94 -~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
+.++++++||||||.+++.+++++|+....+++.+
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 34689999999999999999999987544444443
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.86 E-value=1.3e-20 Score=166.60 Aligned_cols=116 Identities=13% Similarity=0.113 Sum_probs=86.6
Q ss_pred CCEEEEEEecCC-CCCCcEEEEECCCCCchhhH-----HHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHH-
Q 021382 12 QGLNLHIAEAGA-DADAHVVVFLHGFPEIWYSW-----RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD- 84 (313)
Q Consensus 12 ~g~~i~~~~~g~-~~~~~~ivllHG~~~~~~~w-----~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~- 84 (313)
++.+++...... ...++|||++||+..+...| +.++..|.+.||+|+++|++|+|.|+.. +++.+++.
T Consensus 46 ~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-----~~~~d~~~~ 120 (350)
T TIGR01836 46 DKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-----LTLDDYING 120 (350)
T ss_pred CcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-----CCHHHHHHH
Confidence 455555433211 12356899999986554443 5788889888999999999999987532 35555543
Q ss_pred ----HHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCC
Q 021382 85 ----DLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (313)
Q Consensus 85 ----di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (313)
.+..+.+..+.++++++||||||++++.+++.+|++++++|+++++..
T Consensus 121 ~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 121 YIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred HHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccc
Confidence 344455566889999999999999999999999999999999986654
No 60
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.84 E-value=3.8e-20 Score=183.30 Aligned_cols=103 Identities=20% Similarity=0.279 Sum_probs=82.8
Q ss_pred CCcEEEEECCCCCchhhHHHH-----HHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---hCCCe
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQ-----MVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAK 97 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~-----~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~---l~~~~ 97 (313)
.++||||+|||+.+...|+.+ ++.|.+.||+|+++| +|.|+++.....+++.+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 578999999999999999865 677878899999999 5777665332246777777666666655 34579
Q ss_pred EEEEEeChhHHHHHHHHHhc-ccccceeeEecCCC
Q 021382 98 VFLVAKDFGALTAYMFAIQH-QERVSGVITLGVPI 131 (313)
Q Consensus 98 ~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~ 131 (313)
++++||||||++++.+++.+ |++|+++|+++++.
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 99999999999999998855 56899999988764
No 61
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.84 E-value=7.4e-20 Score=153.55 Aligned_cols=122 Identities=21% Similarity=0.205 Sum_probs=92.8
Q ss_pred eeeeeC-CEEEEEEecCCC-CCCcEEEEECCCCCc----hhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHH
Q 021382 7 KFIKVQ-GLNLHIAEAGAD-ADAHVVVFLHGFPEI----WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQ 80 (313)
Q Consensus 7 ~~~~~~-g~~i~~~~~g~~-~~~~~ivllHG~~~~----~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 80 (313)
.+++.. |..+.+...... +..++|||+|||++. ...|..+++.|.+.||+|+++|+||||.|+... ..+++.
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~ 80 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWD 80 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHH
Confidence 345554 333333333321 124689999999864 346777788888889999999999999997543 245788
Q ss_pred HHHHHHHHH---HHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 81 DMVDDLLAI---LDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 81 ~~~~di~~~---~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.+++|+..+ +++.+.++++|+||||||.+++.+|.++|++++++|++++.
T Consensus 81 ~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 888887775 45557789999999999999999999999999999998754
No 62
>PRK13604 luxD acyl transferase; Provisional
Probab=99.83 E-value=7.1e-19 Score=148.53 Aligned_cols=118 Identities=21% Similarity=0.256 Sum_probs=87.9
Q ss_pred eeee-CCEEEEEEecCCC----CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCC-CCCCCCCCCCCCcHHH
Q 021382 8 FIKV-QGLNLHIAEAGAD----ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GLSDPPAEPEKTSFQD 81 (313)
Q Consensus 8 ~~~~-~g~~i~~~~~g~~----~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~-G~S~~~~~~~~~~~~~ 81 (313)
.+.+ +|.+|..+...+. +..++||++||+.++...+..++..|.+.||.|+.+|+||| |.|+..- ...++..
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~s~ 90 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTMSI 90 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCcccc
Confidence 3444 8999987665442 12468999999999887788889999999999999999998 9996432 2334444
Q ss_pred HHHHHHHHHHHh---CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 82 MVDDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 82 ~~~di~~~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
..+|+..+++.+ +.+++.|+||||||.+|+..|+.. .++++|+.++
T Consensus 91 g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp 139 (307)
T PRK13604 91 GKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVG 139 (307)
T ss_pred cHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCC
Confidence 567775555444 567899999999999997777643 3888887653
No 63
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=1.8e-19 Score=150.92 Aligned_cols=126 Identities=21% Similarity=0.351 Sum_probs=105.3
Q ss_pred ccceeeeeCCEEEEEEecCCC--C---CCcEEEEECCCCCchhhHHHHHHHHHHC---------CCEEEeeCCCCCCCCC
Q 021382 4 IEHKFIKVQGLNLHIAEAGAD--A---DAHVVVFLHGFPEIWYSWRHQMVGVATA---------GFRAIAPDCRGYGLSD 69 (313)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~--~---~~~~ivllHG~~~~~~~w~~~~~~l~~~---------~~~vi~~D~~G~G~S~ 69 (313)
+.+-..++.|++||+.+.-+. + .--|++++||||++...|-.+++.|... -|.||||.+||||.|+
T Consensus 124 f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd 203 (469)
T KOG2565|consen 124 FKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSD 203 (469)
T ss_pred hhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCc
Confidence 334456679999999876531 1 1138999999999999998889888653 2789999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 70 PPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 70 ~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.+.. ...+..+.|.-+..+|=+||.+++.|-|.+||+.|+..+|..||++|.++-+--+.
T Consensus 204 ~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~ 263 (469)
T KOG2565|consen 204 APSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCF 263 (469)
T ss_pred CCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccc
Confidence 8754 46788899999999999999999999999999999999999999999999875443
No 64
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.76 E-value=3.8e-16 Score=127.57 Aligned_cols=270 Identities=20% Similarity=0.278 Sum_probs=161.6
Q ss_pred eeeeeCCEEEEEEecCCCC-CCcEEEEECCCCCchhh-HHHH-----HHHHHHCCCEEEeeCCCCCCC--CCCCCCCCCC
Q 021382 7 KFIKVQGLNLHIAEAGADA-DAHVVVFLHGFPEIWYS-WRHQ-----MVGVATAGFRAIAPDCRGYGL--SDPPAEPEKT 77 (313)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~-~~~~ivllHG~~~~~~~-w~~~-----~~~l~~~~~~vi~~D~~G~G~--S~~~~~~~~~ 77 (313)
+.|++.-..+|+...|+.+ ++|+||=.|..+.++.+ |..+ +..++. +|.|+-+|.|||-. ...|.+..-.
T Consensus 25 ~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~fcv~HV~~PGqe~gAp~~p~~y~yP 103 (326)
T KOG2931|consen 25 HDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-HFCVYHVDAPGQEDGAPSFPEGYPYP 103 (326)
T ss_pred eeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-heEEEecCCCccccCCccCCCCCCCC
Confidence 3455555679999998622 47899999999877665 5443 345555 59999999999943 3334443456
Q ss_pred cHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcch
Q 021382 78 SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGR 157 (313)
Q Consensus 78 ~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
|++++|++|..+++.++++.++-+|---|+.|-.++|..||++|.+|||+++.....+...| ...++....|..
T Consensus 104 smd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew---~~~K~~s~~l~~--- 177 (326)
T KOG2931|consen 104 SMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEW---AYNKVSSNLLYY--- 177 (326)
T ss_pred CHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHH---HHHHHHHHHHHh---
Confidence 99999999999999999999999999999999999999999999999999864332221111 111111111100
Q ss_pred hhhhccCCc-HHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccc
Q 021382 158 AEADFGRLD-AKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHE 236 (313)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++-.. ..+.+-. ..|.... ...+.++....+.. ......+.++..|...+.. .+++..
T Consensus 178 ----~Gmt~~~~d~ll~--H~Fg~e~---~~~~~diVq~Yr~~--l~~~~N~~Nl~~fl~ayn~----------R~DL~~ 236 (326)
T KOG2931|consen 178 ----YGMTQGVKDYLLA--HHFGKEE---LGNNSDIVQEYRQH--LGERLNPKNLALFLNAYNG----------RRDLSI 236 (326)
T ss_pred ----hchhhhHHHHHHH--HHhcccc---ccccHHHHHHHHHH--HHhcCChhHHHHHHHHhcC----------CCCccc
Confidence 00000 0111111 1111111 11111111100000 0011222334444433321 111111
Q ss_pred cccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCC-CceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 237 KFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVP-NLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 237 ~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p-~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
........++||+|++.|+..+.+.. +.+ .-.+.-| +.++..+.+||=.++.|+|.++++.++=|+..
T Consensus 237 ~r~~~~~tlkc~vllvvGd~Sp~~~~--vv~-----~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 237 ERPKLGTTLKCPVLLVVGDNSPHVSA--VVE-----CNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred cCCCcCccccccEEEEecCCCchhhh--hhh-----hhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 11111125789999999999987642 111 1122233 47899999999999999999999999999864
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.75 E-value=1.9e-17 Score=127.56 Aligned_cols=93 Identities=25% Similarity=0.373 Sum_probs=75.5
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHH
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGAL 108 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ 108 (313)
+|||+||++++...|...++.|.+.||.|+++|+||+|.+.. .....++.+++. .+..+.+++.++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG-----ADAVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH-----SHHHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch-----hHHHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 699999999999999999999999999999999999998732 113333433333 1123678999999999999
Q ss_pred HHHHHHHhcccccceeeEecC
Q 021382 109 TAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 109 ia~~~a~~~p~~v~~lvl~~~ 129 (313)
+++.++..+ .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999988 78999998863
No 66
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.74 E-value=8.1e-17 Score=133.39 Aligned_cols=267 Identities=17% Similarity=0.273 Sum_probs=142.4
Q ss_pred eeeeeCCEEEEEEecCCCC-CCcEEEEECCCCCchhh-HHHHH-----HHHHHCCCEEEeeCCCCCCCC--CCCCCCCCC
Q 021382 7 KFIKVQGLNLHIAEAGADA-DAHVVVFLHGFPEIWYS-WRHQM-----VGVATAGFRAIAPDCRGYGLS--DPPAEPEKT 77 (313)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~-~~~~ivllHG~~~~~~~-w~~~~-----~~l~~~~~~vi~~D~~G~G~S--~~~~~~~~~ 77 (313)
+.+++.-..+++...|+.. ++|+||=.|-.+.+..+ |..++ ..++ .+|.++=+|.||+..- +.|.+..-.
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCccccccccccc
Confidence 3577777799999999732 48999999988877766 55443 4444 4799999999999653 333333345
Q ss_pred cHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcch
Q 021382 78 SFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGR 157 (313)
Q Consensus 78 ~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (313)
|++++|++|.++++.++++.++-+|---|+.|-.++|..||++|.++||+++.....+ +..+...+.....+..-
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g---w~Ew~~~K~~~~~L~~~-- 155 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG---WMEWFYQKLSSWLLYSY-- 155 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S------HHHHHHHHHH---------
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc---HHHHHHHHHhccccccc--
Confidence 9999999999999999999999999999999999999999999999999986433212 11111111110000000
Q ss_pred hhhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCccccccccc
Q 021382 158 AEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEK 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
.... ...+.+-. ..|.... ...+.++....+.. ..+...+.++..|...+... +++
T Consensus 156 ---gmt~-~~~d~Ll~--h~Fg~~~---~~~n~Dlv~~yr~~--l~~~~Np~Nl~~f~~sy~~R----------~DL--- 211 (283)
T PF03096_consen 156 ---GMTS-SVKDYLLW--HYFGKEE---EENNSDLVQTYRQH--LDERINPKNLALFLNSYNSR----------TDL--- 211 (283)
T ss_dssp ---CTTS--HHHHHHH--HHS-HHH---HHCT-HHHHHHHHH--HHT-TTHHHHHHHHHHHHT-----------------
T ss_pred ---cccc-chHHhhhh--ccccccc---ccccHHHHHHHHHH--HhcCCCHHHHHHHHHHHhcc----------ccc---
Confidence 0000 01111110 0011000 00011111100000 00112334455555443210 011
Q ss_pred ccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCC-CceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 238 FSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVP-NLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 238 ~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p-~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
........||+|++.|+..+... .+.+ ...+..| +.++..+++||=.+..|+|+++++.++=||+.
T Consensus 212 -~~~~~~~~c~vLlvvG~~Sp~~~--~vv~-----~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 212 -SIERPSLGCPVLLVVGDNSPHVD--DVVE-----MNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp --SECTTCCS-EEEEEETTSTTHH--HHHH-----HHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred -hhhcCCCCCCeEEEEecCCcchh--hHHH-----HHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 11122456999999999998753 1111 1223334 47999999999999999999999999999874
No 67
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.74 E-value=5.5e-16 Score=132.40 Aligned_cols=119 Identities=18% Similarity=0.274 Sum_probs=84.3
Q ss_pred CCEEEEEEecCC----CCCCcEEEEECCCCCchhhHHHH--HHHHHH-CCCEEEeeCC--CCCCCCCCC-----------
Q 021382 12 QGLNLHIAEAGA----DADAHVVVFLHGFPEIWYSWRHQ--MVGVAT-AGFRAIAPDC--RGYGLSDPP----------- 71 (313)
Q Consensus 12 ~g~~i~~~~~g~----~~~~~~ivllHG~~~~~~~w~~~--~~~l~~-~~~~vi~~D~--~G~G~S~~~----------- 71 (313)
-+.++.|...-+ ..+.|+|+|+||++++...|... +..+++ .++.||+||. +|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~ 102 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGF 102 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccc
Confidence 455555554432 12368999999999998888542 344543 5899999998 666543211
Q ss_pred -------CCCCCCcHHH-HHHHHHHHHHH---hCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 72 -------AEPEKTSFQD-MVDDLLAILDH---LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 72 -------~~~~~~~~~~-~~~di~~~~~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+....+++.. +++++..++++ ++.++++++||||||.+|+.++.++|+.+++++++++.
T Consensus 103 ~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 103 YVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred cccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 0001234444 46888888887 35568999999999999999999999999999987643
No 68
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.72 E-value=8.6e-17 Score=142.77 Aligned_cols=103 Identities=15% Similarity=0.230 Sum_probs=81.9
Q ss_pred CCcEEEEECCCCCc--hhhHHH-HHHHHHH--CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh------C
Q 021382 26 DAHVVVFLHGFPEI--WYSWRH-QMVGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL------G 94 (313)
Q Consensus 26 ~~~~ivllHG~~~~--~~~w~~-~~~~l~~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l------~ 94 (313)
++|++|+||||.++ ...|.. +...|.. ..++||++|++|||.|..+.. ..+ ...+++++.++++.| +
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a-~~~-t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS-AAY-TKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc-ccc-HHHHHHHHHHHHHHHHHhhCCC
Confidence 57999999999865 356875 4445542 259999999999999875532 233 367778888888865 4
Q ss_pred CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 95 LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 95 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
++++|||||||||.||..++.++|++|.++++++++
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 789999999999999999999999999999999854
No 69
>PRK11460 putative hydrolase; Provisional
Probab=99.72 E-value=5.1e-16 Score=129.04 Aligned_cols=179 Identities=13% Similarity=0.067 Sum_probs=112.2
Q ss_pred CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCC---------CCCCc---HHHHHHHH----HH
Q 021382 25 ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE---------PEKTS---FQDMVDDL----LA 88 (313)
Q Consensus 25 ~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~---------~~~~~---~~~~~~di----~~ 88 (313)
+..|.|||+||++++...|..+++.|......+..++++|...+..... ..... +....+.+ ..
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 3467999999999999999999988876444444444555432211000 00111 12222223 33
Q ss_pred HHHHhCC--CeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCc
Q 021382 89 ILDHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLD 166 (313)
Q Consensus 89 ~~~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (313)
+.+++++ ++++|+|||+||.+++.+++.+|+.+.+++..+... +
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~------------~---------------------- 139 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY------------A---------------------- 139 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc------------c----------------------
Confidence 3344454 479999999999999999999998777766543100 0
Q ss_pred HHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccC
Q 021382 167 AKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVK 246 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (313)
. . + . ....+
T Consensus 140 ------~-~--------~------------------------~--------------------------------~~~~~ 148 (232)
T PRK11460 140 ------S-L--------P------------------------E--------------------------------TAPTA 148 (232)
T ss_pred ------c-c--------c------------------------c--------------------------------cccCC
Confidence 0 0 0 0 00135
Q ss_pred CcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 247 VPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 247 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
.|+++++|++|+++|........ ..+++.-.+++++.++++||.+..+.-+.+.+.+.++|.
T Consensus 149 ~pvli~hG~~D~vvp~~~~~~~~--~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 149 TTIHLIHGGEDPVIDVAHAVAAQ--EALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred CcEEEEecCCCCccCHHHHHHHH--HHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 79999999999999865443322 223433346788999999999876666666666665553
No 70
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=6.7e-16 Score=131.04 Aligned_cols=120 Identities=22% Similarity=0.292 Sum_probs=93.0
Q ss_pred eCCEEEEEEecCCCC--CCcEEEEECCCCCchh-----------hHHHHHH---HHHHCCCEEEeeCCCCCC-CCCCC--
Q 021382 11 VQGLNLHIAEAGADA--DAHVVVFLHGFPEIWY-----------SWRHQMV---GVATAGFRAIAPDCRGYG-LSDPP-- 71 (313)
Q Consensus 11 ~~g~~i~~~~~g~~~--~~~~ivllHG~~~~~~-----------~w~~~~~---~l~~~~~~vi~~D~~G~G-~S~~~-- 71 (313)
+++.+|.|+.+|.-. ...+||++||+.++++ -|+.++. .+...+|.|||.+..|.+ .|+.|
T Consensus 33 l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 33 LSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred ccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 367889999999521 1358999999988543 3554442 233457999999999998 45444
Q ss_pred --CC-------CCCCcHHHHHHHHHHHHHHhCCCeEE-EEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 72 --AE-------PEKTSFQDMVDDLLAILDHLGLAKVF-LVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 72 --~~-------~~~~~~~~~~~di~~~~~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+. ...+|+.+++.--..+++.|||+++. +||.|||||.|+.++..|||+|.+++.++++
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 11 12468889888778899999999966 9999999999999999999999999988754
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.69 E-value=4.2e-15 Score=127.31 Aligned_cols=105 Identities=16% Similarity=0.241 Sum_probs=75.9
Q ss_pred CCcEEEEECCCCCchhhHHHHH---HHHHHCCCEEEeeCCCCCCC-----CCC-------------C-C-----CCCCCc
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQM---VGVATAGFRAIAPDCRGYGL-----SDP-------------P-A-----EPEKTS 78 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~---~~l~~~~~~vi~~D~~G~G~-----S~~-------------~-~-----~~~~~~ 78 (313)
..|+|+|+||++++...|.... ..+...++.||+||.+++|. +.. . . ....+-
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 3589999999999887775422 44455689999999987761 100 0 0 000122
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.+++.+.+.++.+.++.++++|+||||||..|+.++.++|+++++++.+++.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 3445555555566678889999999999999999999999999999987754
No 72
>PLN00021 chlorophyllase
Probab=99.68 E-value=6e-15 Score=127.22 Aligned_cols=101 Identities=24% Similarity=0.311 Sum_probs=72.8
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-------hCCCeE
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH-------LGLAKV 98 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~-------l~~~~~ 98 (313)
+.|+|||+||++.+...|..+++.|++.||.|+++|++|++.+.... ...+..+..+.+.+.++. .+.+++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v 128 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSKL 128 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhhe
Confidence 36899999999999889999999998889999999999975432111 111122223333332222 345789
Q ss_pred EEEEeChhHHHHHHHHHhccc-----ccceeeEec
Q 021382 99 FLVAKDFGALTAYMFAIQHQE-----RVSGVITLG 128 (313)
Q Consensus 99 ~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~ 128 (313)
+++||||||.+|+.+|..+|+ ++.++++++
T Consensus 129 ~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ld 163 (313)
T PLN00021 129 ALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLD 163 (313)
T ss_pred EEEEECcchHHHHHHHhhccccccccceeeEEeec
Confidence 999999999999999999885 466777665
No 73
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.65 E-value=5.6e-16 Score=131.73 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=78.7
Q ss_pred CCcEEEEECCCCCch-hhHHHHH-HHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh------CCC
Q 021382 26 DAHVVVFLHGFPEIW-YSWRHQM-VGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL------GLA 96 (313)
Q Consensus 26 ~~~~ivllHG~~~~~-~~w~~~~-~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l------~~~ 96 (313)
++|++|+||||.++. ..|...+ ..++. .+++||++|++|++.+..+. ..+++...++++.++++.+ +.+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 478999999999887 6786544 34543 47999999999984432211 2345555666666666664 457
Q ss_pred eEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 97 KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+++||||||||.+|..++.++|+++.++++++++
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa 146 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPA 146 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCC
Confidence 8999999999999999999999999999999854
No 74
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.62 E-value=1.6e-14 Score=136.25 Aligned_cols=226 Identities=18% Similarity=0.265 Sum_probs=135.7
Q ss_pred CCEEEEEEecCCCC-C--C--cEEEEECCCCCchhh--HHHHHHHHHHCCCEEEeeCCCCCCCC-----CCC-CCCCCCc
Q 021382 12 QGLNLHIAEAGADA-D--A--HVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLS-----DPP-AEPEKTS 78 (313)
Q Consensus 12 ~g~~i~~~~~g~~~-~--~--~~ivllHG~~~~~~~--w~~~~~~l~~~~~~vi~~D~~G~G~S-----~~~-~~~~~~~ 78 (313)
+|.+|+.+..-+.. + + |.||++||.|..... |...++.|+..||-|++++.||-+.- +.. .+.....
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~ 453 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVD 453 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCcc
Confidence 89899987765422 1 1 789999999876554 44556778889999999999976442 111 1112335
Q ss_pred HHHHHHHHHHHHHHhC-CC--eEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCc
Q 021382 79 FQDMVDDLLAILDHLG-LA--KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEP 155 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~-~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (313)
++++.+.+. ++++.+ ++ ++.+.|||+||.+++..+.+.| ++++.+....... . +. ...
T Consensus 454 ~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~--~---~~-~~~----------- 514 (620)
T COG1506 454 LEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD--W---LL-YFG----------- 514 (620)
T ss_pred HHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch--h---hh-hcc-----------
Confidence 556665555 555554 33 7999999999999999999998 5666554332110 0 00 000
Q ss_pred chhhhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCccccccc
Q 021382 156 GRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIH 235 (313)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
.... . + ... ..+.. . .+.+ . ...|...
T Consensus 515 --------~~~~-----~-~---~~~-------~~~~~---~----~~~~-~---~~~~~~~------------------ 541 (620)
T COG1506 515 --------ESTE-----G-L---RFD-------PEENG---G----GPPE-D---REKYEDR------------------ 541 (620)
T ss_pred --------ccch-----h-h---cCC-------HHHhC---C----Cccc-C---hHHHHhc------------------
Confidence 0000 0 0 000 00000 0 0000 0 0111000
Q ss_pred ccccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccc-cChhHHHHHHHHHhhhc
Q 021382 236 EKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQE-QSPEEVNQLVLTFLNKH 312 (313)
Q Consensus 236 ~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~-e~pe~~~~~i~~fl~~~ 312 (313)
.......++++|+|+|+|+.|.-++.+....++. .+++.-..++++++|+.||.+-. ++-..+.+.+.+|+.++
T Consensus 542 -sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~--aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 542 -SPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVD--ALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred -ChhhhhcccCCCEEEEeecCCccCChHHHHHHHH--HHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 0000123789999999999999998765544433 35555667999999999997666 55667778888888653
No 75
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.62 E-value=1.1e-14 Score=119.37 Aligned_cols=112 Identities=21% Similarity=0.356 Sum_probs=96.6
Q ss_pred EEEEecCCCC-CCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 021382 16 LHIAEAGADA-DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 94 (313)
Q Consensus 16 i~~~~~g~~~-~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~ 94 (313)
--|.+..+.+ ...+||=+||-|+|+.+|..+.+.|.+.+.|+|.+.+||+|.|+.+++ ..|+-.+-..-+.++++.|+
T Consensus 23 a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~ 101 (297)
T PF06342_consen 23 AVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELG 101 (297)
T ss_pred EEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcC
Confidence 3466665422 123799999999999999999999988999999999999999987654 57899999999999999999
Q ss_pred CC-eEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 95 LA-KVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 95 ~~-~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
++ +.+++|||.||-.|+.+|..+| +.++++++++
T Consensus 102 i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 102 IKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred CCCceEEEEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 87 5999999999999999999996 7799999864
No 76
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.62 E-value=3.9e-15 Score=140.00 Aligned_cols=110 Identities=21% Similarity=0.185 Sum_probs=87.6
Q ss_pred eeeeCCEEEEEEecCCC--------CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCC-------
Q 021382 8 FIKVQGLNLHIAEAGAD--------ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPA------- 72 (313)
Q Consensus 8 ~~~~~g~~i~~~~~g~~--------~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~------- 72 (313)
+...++.+|.|...|.. ...|+|||+||+.++...|..+++.|.+.+|+||++|+||||.|....
T Consensus 422 ~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a 501 (792)
T TIGR03502 422 LTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNA 501 (792)
T ss_pred EEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccc
Confidence 44457777777665432 113589999999999999999999998789999999999999995531
Q ss_pred ---CCCC-----------CcHHHHHHHHHHHHHHhC----------------CCeEEEEEeChhHHHHHHHHHhc
Q 021382 73 ---EPEK-----------TSFQDMVDDLLAILDHLG----------------LAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 73 ---~~~~-----------~~~~~~~~di~~~~~~l~----------------~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
.... ..+.+.+.|+..++..++ ..+++++||||||+++..++...
T Consensus 502 ~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 502 TNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1111 278999999999999887 34899999999999999999753
No 77
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.61 E-value=3.4e-14 Score=114.26 Aligned_cols=223 Identities=18% Similarity=0.161 Sum_probs=134.0
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH-HhCCCeEEEEEeCh
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD-HLGLAKVFLVAKDF 105 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~-~l~~~~~~lvGhS~ 105 (313)
++-++|+|=-++++..|+.-...|.. ...++++++||.|.--. .+-..+++.+++.|..-+. -..-+++.++||||
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~--ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFG--EPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccC--CcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 56799999777777777765556644 59999999999987522 2235689999999998777 34445899999999
Q ss_pred hHHHHHHHHHhccc---ccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHHHhhhcCCC
Q 021382 106 GALTAYMFAIQHQE---RVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSE 182 (313)
Q Consensus 106 Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (313)
||++|..+|.+... ...++.++++... .... . +.+...+.++.++. ...+++..
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP--~~~~------~--------------~~i~~~~D~~~l~~-l~~lgG~p 140 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAP--HYDR------G--------------KQIHHLDDADFLAD-LVDLGGTP 140 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCC--CCcc------c--------------CCccCCCHHHHHHH-HHHhCCCC
Confidence 99999999987542 2444555543211 0000 0 00111111222332 11122221
Q ss_pred CCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEEEEeeCCCcCCCC
Q 021382 183 IPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKF 262 (313)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~ 262 (313)
. ...++++++..+- -.+.+.+.. ... |+. .....++||+.++.|++|..++.
T Consensus 141 ~-e~led~El~~l~L--------------PilRAD~~~-----~e~--Y~~------~~~~pl~~pi~~~~G~~D~~vs~ 192 (244)
T COG3208 141 P-ELLEDPELMALFL--------------PILRADFRA-----LES--YRY------PPPAPLACPIHAFGGEKDHEVSR 192 (244)
T ss_pred h-HHhcCHHHHHHHH--------------HHHHHHHHH-----hcc--ccc------CCCCCcCcceEEeccCcchhccH
Confidence 0 1112223322111 011111110 000 111 11236899999999999999875
Q ss_pred CCchhhhhcccccccCC-CceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 263 PGIEDYIRSGKVKDFVP-NLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 263 ~~~~~~~~~~~~~~~~p-~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
+.+.. .++... ..+++.+| +||+...++.+++.+.|.+.+.
T Consensus 193 ~~~~~------W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 193 DELGA------WREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHHHH------HHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 44332 334444 57899998 5999999999999999999885
No 78
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.59 E-value=1e-14 Score=98.98 Aligned_cols=78 Identities=32% Similarity=0.408 Sum_probs=67.3
Q ss_pred CEEEEEEecCCCCC-CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 021382 13 GLNLHIAEAGADAD-AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 91 (313)
Q Consensus 13 g~~i~~~~~g~~~~-~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~ 91 (313)
|.+|+++.+.++.. +.+|+++||+.+++..|..+++.|++.||.|+++|+||||+|+... ....+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~r-g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKR-GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcc-cccCCHHHHHHHHHHHhC
Confidence 67899998876443 6799999999999999999999999999999999999999998543 245689999999999874
No 79
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.59 E-value=1.4e-13 Score=107.58 Aligned_cols=98 Identities=18% Similarity=0.267 Sum_probs=76.1
Q ss_pred CcEEEEECCCCCchhh--HHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC---CeEEEE
Q 021382 27 AHVVVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL---AKVFLV 101 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~--w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~---~~~~lv 101 (313)
...+|++|||-++... -..++.+|.+.++.+..+|++|-|.|+-.-....| ...|+|+..+++.+.- -=-+++
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~--~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNY--NTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcc--cchHHHHHHHHHHhccCceEEEEEE
Confidence 4689999999887643 23456677778999999999999999755333333 3567999999999842 236899
Q ss_pred EeChhHHHHHHHHHhcccccceeeEe
Q 021382 102 AKDFGALTAYMFAIQHQERVSGVITL 127 (313)
Q Consensus 102 GhS~Gg~ia~~~a~~~p~~v~~lvl~ 127 (313)
|||-||-+++.||.++++ +.-++-+
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNc 135 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINC 135 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEc
Confidence 999999999999999988 5545533
No 80
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.58 E-value=1.9e-13 Score=114.47 Aligned_cols=102 Identities=18% Similarity=0.276 Sum_probs=68.9
Q ss_pred CCCcEEEEECCCCCchhh-HH-HHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCCeE
Q 021382 25 ADAHVVVFLHGFPEIWYS-WR-HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKV 98 (313)
Q Consensus 25 ~~~~~ivllHG~~~~~~~-w~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l----~~~~~ 98 (313)
..+|.||++||+.+++.+ |. ..+..+.++|+.|++++.||||.+.-. .+.-|+. ...+|+..+++.+ .-.|+
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~-~p~~yh~-G~t~D~~~~l~~l~~~~~~r~~ 150 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANT-SPRLYHS-GETEDIRFFLDWLKARFPPRPL 150 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCccc-Ccceecc-cchhHHHHHHHHHHHhCCCCce
Confidence 346899999999776543 53 345677778999999999999998542 1222322 2336666666665 45689
Q ss_pred EEEEeChhH-HHHHHHHHhccc-ccceeeEec
Q 021382 99 FLVAKDFGA-LTAYMFAIQHQE-RVSGVITLG 128 (313)
Q Consensus 99 ~lvGhS~Gg-~ia~~~a~~~p~-~v~~lvl~~ 128 (313)
..||.|+|| +++..++..-.+ .+.+.+.++
T Consensus 151 ~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs 182 (345)
T COG0429 151 YAVGFSLGGNMLANYLGEEGDDLPLDAAVAVS 182 (345)
T ss_pred EEEEecccHHHHHHHHHhhccCcccceeeeee
Confidence 999999999 777777764322 334444444
No 81
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.58 E-value=2.6e-13 Score=109.94 Aligned_cols=96 Identities=16% Similarity=0.279 Sum_probs=67.8
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH----hC-CCeEEE
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH----LG-LAKVFL 100 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~----l~-~~~~~l 100 (313)
.++|++.||...+...-..+...|.. .+++++++|.+|+|.|+..+. +. ..-+|+.++-+. .| .++++|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps-E~----n~y~Di~avye~Lr~~~g~~~~Iil 134 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS-ER----NLYADIKAVYEWLRNRYGSPERIIL 134 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc-cc----cchhhHHHHHHHHHhhcCCCceEEE
Confidence 48999999995544311122223322 378999999999999975432 12 334455544333 33 578999
Q ss_pred EEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 101 VAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 101 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
.|+|||...++.+|.+.| +.++||.++
T Consensus 135 ~G~SiGt~~tv~Lasr~~--~~alVL~SP 161 (258)
T KOG1552|consen 135 YGQSIGTVPTVDLASRYP--LAAVVLHSP 161 (258)
T ss_pred EEecCCchhhhhHhhcCC--cceEEEecc
Confidence 999999999999999999 999998763
No 82
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.58 E-value=7.9e-15 Score=120.61 Aligned_cols=196 Identities=17% Similarity=0.220 Sum_probs=111.9
Q ss_pred HHHHHHHHCCCEEEeeCCCCCCCCCCC--CCCCCCcHHHHHHHHHHHHHHh----C--CCeEEEEEeChhHHHHHHHHHh
Q 021382 45 HQMVGVATAGFRAIAPDCRGYGLSDPP--AEPEKTSFQDMVDDLLAILDHL----G--LAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 45 ~~~~~l~~~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~~~di~~~~~~l----~--~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
.....|++.||.|+.+|.||.+..... .......-....+|+.+.++.+ . .+++.++|||+||.+++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 345677788999999999998753221 0001111123455566555555 2 3589999999999999999999
Q ss_pred cccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcc
Q 021382 117 HQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLV 196 (313)
Q Consensus 117 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (313)
+|++++++|..++.......... .. . .... . +..+...
T Consensus 85 ~~~~f~a~v~~~g~~d~~~~~~~----~~----------------~----~~~~--~-~~~~~~~--------------- 122 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVSDLFSYYGT----TD----------------I----YTKA--E-YLEYGDP--------------- 122 (213)
T ss_dssp TCCGSSEEEEESE-SSTTCSBHH----TC----------------C----HHHG--H-HHHHSST---------------
T ss_pred cceeeeeeeccceecchhccccc----cc----------------c----cccc--c-ccccCcc---------------
Confidence 99999999977643221110000 00 0 0000 0 0000000
Q ss_pred cCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCCCccCCcEEEEeeCCCcCCCCCCchhhhhcccccc
Q 021382 197 SDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPELTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKD 276 (313)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~ 276 (313)
+...+....... +..+.. ..+++|+|+++|++|..+|+.....+.. .+++
T Consensus 123 --------~~~~~~~~~~s~--------------~~~~~~------~~~~~P~li~hG~~D~~Vp~~~s~~~~~--~L~~ 172 (213)
T PF00326_consen 123 --------WDNPEFYRELSP--------------ISPADN------VQIKPPVLIIHGENDPRVPPSQSLRLYN--ALRK 172 (213)
T ss_dssp --------TTSHHHHHHHHH--------------GGGGGG------CGGGSEEEEEEETTBSSSTTHHHHHHHH--HHHH
T ss_pred --------chhhhhhhhhcc--------------cccccc------ccCCCCEEEEccCCCCccCHHHHHHHHH--HHHh
Confidence 001111111100 000000 0178999999999999998765554432 3455
Q ss_pred cCCCceEEEeCCCCCCcc-ccChhHHHHHHHHHhhhc
Q 021382 277 FVPNLEIIRLSEGSHFVQ-EQSPEEVNQLVLTFLNKH 312 (313)
Q Consensus 277 ~~p~~~~~~i~~~gH~~~-~e~pe~~~~~i~~fl~~~ 312 (313)
.-..++++++|++||... .+...+..+.+.+||.++
T Consensus 173 ~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 173 AGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp TTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 555699999999999444 455668889999999763
No 83
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.53 E-value=2.2e-13 Score=112.24 Aligned_cols=181 Identities=23% Similarity=0.308 Sum_probs=105.9
Q ss_pred CCCcEEEEECCCCCchhhHHHHHH-HHHHCCCEEEeeCCCC------CCC---CCCC-----CCC--CCCcHHHHHHHHH
Q 021382 25 ADAHVVVFLHGFPEIWYSWRHQMV-GVATAGFRAIAPDCRG------YGL---SDPP-----AEP--EKTSFQDMVDDLL 87 (313)
Q Consensus 25 ~~~~~ivllHG~~~~~~~w~~~~~-~l~~~~~~vi~~D~~G------~G~---S~~~-----~~~--~~~~~~~~~~di~ 87 (313)
+..+.||||||++++...|..... .+.....++|++.-|- .|. +-.+ ... ..-.+.+.++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 457899999999999877765444 2222457788776541 233 2111 100 1123444455566
Q ss_pred HHHHHh---C--CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhc
Q 021382 88 AILDHL---G--LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADF 162 (313)
Q Consensus 88 ~~~~~l---~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (313)
++++.. + -++++|.|.|.||++|+.++.++|+.+.++|.++..... .
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~-~--------------------------- 143 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP-E--------------------------- 143 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT-G---------------------------
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc-c---------------------------
Confidence 666643 3 357999999999999999999999999999987632100 0
Q ss_pred cCCcHHHHHHHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccCCC
Q 021382 163 GRLDAKTVVRNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSLPE 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
. . .. . .. .
T Consensus 144 ----------------~-~----------~~---~---------------------------------------~~--~- 151 (216)
T PF02230_consen 144 ----------------S-E----------LE---D---------------------------------------RP--E- 151 (216)
T ss_dssp ----------------C-C----------CH---C---------------------------------------CH--C-
T ss_pred ----------------c-c----------cc---c---------------------------------------cc--c-
Confidence 0 0 00 0 00 0
Q ss_pred CccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 243 LTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 243 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
..-++|+++++|++|+++|....+.. .+.+++...+++++.++++||.+. .+..+.+.+||.+
T Consensus 152 ~~~~~pi~~~hG~~D~vvp~~~~~~~--~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 152 ALAKTPILIIHGDEDPVVPFEWAEKT--AEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp CCCTS-EEEEEETT-SSSTHHHHHHH--HHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred ccCCCcEEEEecCCCCcccHHHHHHH--HHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 01158999999999999986544332 234666666899999999999664 3445778888875
No 84
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.53 E-value=9.8e-14 Score=108.59 Aligned_cols=122 Identities=18% Similarity=0.230 Sum_probs=89.2
Q ss_pred cccceeeee---CCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHH-HHHHCCCEEEeeCCCCCCCCCCCCCCCCCc
Q 021382 3 QIEHKFIKV---QGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMV-GVATAGFRAIAPDCRGYGLSDPPAEPEKTS 78 (313)
Q Consensus 3 ~~~~~~~~~---~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~-~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (313)
+|.+..+++ |.++++....-++...|+++.+||..++....-..+. .....+.+|..++.||||+|+..+...
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~--- 127 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE--- 127 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcccc---
Confidence 455555554 7888886655444568999999999888766655443 334567999999999999997544322
Q ss_pred HHHHHHHHHHHHHHh------CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 79 FQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 79 ~~~~~~di~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
.+.-|-..+++.+ .-.|+++.|-|.||.+|..+|+++.+++.++++-++
T Consensus 128 --GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENT 182 (300)
T KOG4391|consen 128 --GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENT 182 (300)
T ss_pred --ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeech
Confidence 3333444444544 334799999999999999999999999999998764
No 85
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.53 E-value=6.4e-13 Score=120.38 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=82.2
Q ss_pred CCcEEEEECCCCCchhhH-----HHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCC
Q 021382 26 DAHVVVFLHGFPEIWYSW-----RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLA 96 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w-----~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l----~~~ 96 (313)
.+.|||+++.+-.....| .-+++.|.+.||+|+.+|.++-+.++ ...+++++++.+.+.++.. |.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 357999999997555555 34677888899999999999866543 3568888887777777765 678
Q ss_pred eEEEEEeChhHHHHHH----HHHhccc-ccceeeEecCCCC
Q 021382 97 KVFLVAKDFGALTAYM----FAIQHQE-RVSGVITLGVPIL 132 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~ 132 (313)
+++++|+||||.++.. |++++++ +|++++++.++..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 9999999999999997 8899986 8999999876544
No 86
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.49 E-value=4e-13 Score=110.36 Aligned_cols=104 Identities=13% Similarity=0.168 Sum_probs=70.9
Q ss_pred CCcEEEEECCCCCchhhHH---HHHHHHHHCCCEEEeeCCCCCCCCCCCCC-----C---CCCcHHHHHHHHHHHHHHhC
Q 021382 26 DAHVVVFLHGFPEIWYSWR---HQMVGVATAGFRAIAPDCRGYGLSDPPAE-----P---EKTSFQDMVDDLLAILDHLG 94 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~---~~~~~l~~~~~~vi~~D~~G~G~S~~~~~-----~---~~~~~~~~~~di~~~~~~l~ 94 (313)
..|.||++||++++...|. .....+.+.+|.|++||.||+|.+....+ . ......++.+-+..+.+..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 3689999999998877665 22233334689999999999986532110 0 01112222222333333444
Q ss_pred C--CeEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 95 L--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 95 ~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
+ ++++|+||||||.+++.++..+|+++.+++.++.
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g 128 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG 128 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecC
Confidence 4 4799999999999999999999999999987764
No 87
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.49 E-value=9.3e-12 Score=108.08 Aligned_cols=247 Identities=19% Similarity=0.247 Sum_probs=128.2
Q ss_pred CCcEEEEECCCCCchh-hH-HHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCCeEE
Q 021382 26 DAHVVVFLHGFPEIWY-SW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVF 99 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~-~w-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l----~~~~~~ 99 (313)
+.|.||+|||..+++. .+ +.+...+..+||||+.+..||+|.|.... +.-|+. ...+|+.++++.+ ...+..
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT-pr~f~a-g~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT-PRLFTA-GWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC-Cceeec-CCHHHHHHHHHHHHHhCCCCceE
Confidence 4589999999976654 34 33444555679999999999999997542 233322 2345555555544 566899
Q ss_pred EEEeChhHHHHHHHHHhcccc--cceeeEecCCCCCCChh-hHhhhcCchhhHHhhcCcchhhhhccCCcHHHHHHHHHh
Q 021382 100 LVAKDFGALTAYMFAIQHQER--VSGVITLGVPILPPGPI-EFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVVRNIYI 176 (313)
Q Consensus 100 lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (313)
.+|.||||++-..|...--++ +.+.+.++.++...... .+...+....+...+. ..+.++..
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~---------------~~l~~~~~ 266 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALT---------------LNLKRIVL 266 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHH---------------HhHHHHHh
Confidence 999999999999998754332 33333344343210000 0000011111110000 00000000
Q ss_pred hhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccC--CCCCCCCcccccccccccCCCCccCCcEEEEee
Q 021382 177 LFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKS--GFRTALQVPYRSIHEKFSLPELTVKVPALLILG 254 (313)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G 254 (313)
. ++ ....++...++..... ..++.+...+... +|.....+ |+.-. ......+|++|+|+|..
T Consensus 267 ~-~r---~~~~~~~vd~d~~~~~---------~SvreFD~~~t~~~~gf~~~deY-Y~~aS--s~~~v~~I~VP~L~ina 330 (409)
T KOG1838|consen 267 R-HR---HTLFEDPVDFDVILKS---------RSVREFDEALTRPMFGFKSVDEY-YKKAS--SSNYVDKIKVPLLCINA 330 (409)
T ss_pred h-hh---hhhhhccchhhhhhhc---------CcHHHHHhhhhhhhcCCCcHHHH-Hhhcc--hhhhcccccccEEEEec
Confidence 0 00 0000000001111111 1122333222211 22111111 22111 11123479999999999
Q ss_pred CCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccC----hhHHHHH-HHHHhh
Q 021382 255 EKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQS----PEEVNQL-VLTFLN 310 (313)
Q Consensus 255 ~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~----pe~~~~~-i~~fl~ 310 (313)
.+|+++|.+.+. + ...+.+|++-+++-.-+||.-++|. +....+. +.+|+.
T Consensus 331 ~DDPv~p~~~ip-~----~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 331 ADDPVVPEEAIP-I----DDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred CCCCCCCcccCC-H----HHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 999999865442 1 2345688999999999999999997 2333333 666664
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.46 E-value=2.5e-13 Score=126.98 Aligned_cols=116 Identities=15% Similarity=0.156 Sum_probs=88.2
Q ss_pred eCCEEEEEEecCCC--CCCcEEEEECCCCCchh---hHH-HHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHH
Q 021382 11 VQGLNLHIAEAGAD--ADAHVVVFLHGFPEIWY---SWR-HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (313)
Q Consensus 11 ~~g~~i~~~~~g~~--~~~~~ivllHG~~~~~~---~w~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (313)
.||++|++...-+. +..|+||++||++.+.. .|. .....|+++||.|+++|+||+|.|+.... .++ ...++
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~ 80 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDEAA 80 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-cccch
Confidence 37889986554321 23689999999987643 122 23456777899999999999999975422 233 56788
Q ss_pred HHHHHHHHhCC-----CeEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 85 DLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 85 di~~~~~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
|+.++++.+.. .++.++||||||.+++.+|+.+|++++++|..++
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~ 130 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEG 130 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCc
Confidence 88888887632 4899999999999999999999999999997654
No 89
>PRK10162 acetyl esterase; Provisional
Probab=99.45 E-value=4e-11 Score=104.50 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=71.1
Q ss_pred CCcEEEEECCCC---CchhhHHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC--CeEE
Q 021382 26 DAHVVVFLHGFP---EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL--AKVF 99 (313)
Q Consensus 26 ~~~~ivllHG~~---~~~~~w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~--~~~~ 99 (313)
..|+||++||++ ++...|..+...|+. .++.|+++|.|.......|. ...+.....+.+.+..+++++ ++++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D~~~a~~~l~~~~~~~~~d~~~i~ 157 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEEIVAVCCYFHQHAEDYGINMSRIG 157 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHHHHHHHHHHHHhHHHhCCChhHEE
Confidence 368999999976 566678888887876 48999999999754432221 111222333444445556776 4799
Q ss_pred EEEeChhHHHHHHHHHhc------ccccceeeEecC
Q 021382 100 LVAKDFGALTAYMFAIQH------QERVSGVITLGV 129 (313)
Q Consensus 100 lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~ 129 (313)
|+|+|+||.+|+.++... +.++.+++++.+
T Consensus 158 l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p 193 (318)
T PRK10162 158 FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG 193 (318)
T ss_pred EEEECHHHHHHHHHHHHHHhcCCCccChhheEEECC
Confidence 999999999999998754 356788887754
No 90
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.42 E-value=2.3e-12 Score=106.29 Aligned_cols=101 Identities=24% Similarity=0.279 Sum_probs=67.6
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCC-CCCCCC--------cHHHHHHHHHHHHHHh---
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP-AEPEKT--------SFQDMVDDLLAILDHL--- 93 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~-~~~~~~--------~~~~~~~di~~~~~~l--- 93 (313)
+.|.||++|++.+-...-+..+..|++.||.|++||+-+-...... ...... ..+...+|+.+.++.|
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 3689999999988665566778899999999999998643331111 100001 1234567776666665
Q ss_pred C---CCeEEEEEeChhHHHHHHHHHhcccccceeeEe
Q 021382 94 G---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (313)
Q Consensus 94 ~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 127 (313)
. .+++.++|.||||.+++.+|... +.+++.|..
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~ 128 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSF 128 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEE
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEE
Confidence 2 35899999999999999999887 578887754
No 91
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.38 E-value=4.1e-11 Score=103.68 Aligned_cols=116 Identities=21% Similarity=0.174 Sum_probs=74.0
Q ss_pred eCCEEEEEEecCC---CCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCC----------------
Q 021382 11 VQGLNLHIAEAGA---DADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP---------------- 71 (313)
Q Consensus 11 ~~g~~i~~~~~g~---~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~---------------- 71 (313)
.+|.+|+-...-+ .+.-|.||.+||.++....|...+. ++..|+-|+++|.||.|..+..
T Consensus 64 ~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g 142 (320)
T PF05448_consen 64 FDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRG 142 (320)
T ss_dssp GGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTT
T ss_pred cCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcC
Confidence 3777777543322 1234789999999998878876543 5567999999999999932211
Q ss_pred -CC-CCCCcHHHHHHHHHHHHHHh------CCCeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 72 -AE-PEKTSFQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 72 -~~-~~~~~~~~~~~di~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
.+ ...|-+..+..|....++.+ .-+++.+.|.|.||.+++.+|+..| +|++++...
T Consensus 143 ~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~v 206 (320)
T PF05448_consen 143 IDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADV 206 (320)
T ss_dssp TTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEES
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecC
Confidence 00 22344556667777666655 2357999999999999999999886 698888654
No 92
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.33 E-value=1.3e-10 Score=101.74 Aligned_cols=121 Identities=18% Similarity=0.197 Sum_probs=73.5
Q ss_pred eeeCCEEEEEE-ecCCCC-CCcEEEEECCCCCchhhHHHHH-HHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHH
Q 021382 9 IKVQGLNLHIA-EAGADA-DAHVVVFLHGFPEIWYSWRHQM-VGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDD 85 (313)
Q Consensus 9 ~~~~g~~i~~~-~~g~~~-~~~~ivllHG~~~~~~~w~~~~-~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 85 (313)
|...|.+|... ...+.. ..|+||++-|.-+....+...+ +.+..+|+.++++|+||-|.|..-+-..++ ..+-+.
T Consensus 170 iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~--~~l~~a 247 (411)
T PF06500_consen 170 IPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS--SRLHQA 247 (411)
T ss_dssp EEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C--CHHHHH
T ss_pred EeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCH--HHHHHH
Confidence 44466666533 333211 2244554445544444543444 457788999999999999998643211222 345566
Q ss_pred HHHHHHHhC---CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 86 LLAILDHLG---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 86 i~~~~~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
+.+.+.... -+++.++|-|+||.+|.++|..+++|++++|..|++.
T Consensus 248 VLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 248 VLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred HHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 766666664 3489999999999999999999999999999988653
No 93
>COG0400 Predicted esterase [General function prediction only]
Probab=99.32 E-value=4.7e-11 Score=96.15 Aligned_cols=101 Identities=16% Similarity=0.233 Sum_probs=69.7
Q ss_pred CCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCC--------CCCCCC-------cHHHHHHHHH
Q 021382 23 ADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP--------AEPEKT-------SFQDMVDDLL 87 (313)
Q Consensus 23 ~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~--------~~~~~~-------~~~~~~~di~ 87 (313)
.+++.|+|||+||++++-.++-+....+. .++.++++ || .+..+ .+...+ ....+++-+.
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~-P~~~~is~--rG--~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELIL-PNATLVSP--RG--PVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcC-CCCeEEcC--CC--CccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 33557789999999998777766444333 34666654 22 22111 011122 3445666666
Q ss_pred HHHHHhCC--CeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 88 AILDHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 88 ~~~~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
...++.++ ++++++|+|=|+++++.+..++|+.++++++.+
T Consensus 89 ~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~ 131 (207)
T COG0400 89 ELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFS 131 (207)
T ss_pred HHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcC
Confidence 66777787 789999999999999999999999999988765
No 94
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.30 E-value=3.6e-10 Score=93.80 Aligned_cols=117 Identities=22% Similarity=0.216 Sum_probs=83.9
Q ss_pred eeeCCEEEEEEecCC-CCCC-cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCC-CCCCCCCCCC---------C
Q 021382 9 IKVQGLNLHIAEAGA-DADA-HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GLSDPPAEPE---------K 76 (313)
Q Consensus 9 ~~~~g~~i~~~~~g~-~~~~-~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~-G~S~~~~~~~---------~ 76 (313)
+...+..+.-...-+ .+.+ |.||++|++.+-....+.+.+.|+..||-|++||+-+. |.+....+.. .
T Consensus 7 ~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (236)
T COG0412 7 IPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVER 86 (236)
T ss_pred eeCCCceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhcc
Confidence 444555555333222 1223 79999999988777888999999999999999999874 4433222110 1
Q ss_pred CcHHHHHHHHHHHHHHhC------CCeEEEEEeChhHHHHHHHHHhcccccceeeE
Q 021382 77 TSFQDMVDDLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQHQERVSGVIT 126 (313)
Q Consensus 77 ~~~~~~~~di~~~~~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 126 (313)
.+..+...|+.+.++.|. .+++.++|.||||.+++.++...| .+++.|.
T Consensus 87 ~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~ 141 (236)
T COG0412 87 VDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVA 141 (236)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEE
Confidence 223577788888888773 467999999999999999999988 6777664
No 95
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.29 E-value=6.3e-10 Score=98.28 Aligned_cols=102 Identities=13% Similarity=0.152 Sum_probs=82.9
Q ss_pred cEEEEECCCCCchhhHH-HHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChh
Q 021382 28 HVVVFLHGFPEIWYSWR-HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 106 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~-~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~G 106 (313)
||||++--+-++..... ..++.|+. |+.|+..|..--+.... .....+++++++-|.++++.+|-+ ++++|.++|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~--~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL--SAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch--hcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 79999999887766653 45677877 99999999887765422 234689999999999999999877 999999999
Q ss_pred HHHHHHHHHhc-----ccccceeeEecCCCCC
Q 021382 107 ALTAYMFAIQH-----QERVSGVITLGVPILP 133 (313)
Q Consensus 107 g~ia~~~a~~~-----p~~v~~lvl~~~~~~~ 133 (313)
|..++.+++.. |++++++++++++...
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 99988777655 6779999999877654
No 96
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.28 E-value=4e-11 Score=98.78 Aligned_cols=102 Identities=22% Similarity=0.234 Sum_probs=70.9
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHH--------CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHH----HHHHHHHHh
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVAT--------AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD----DLLAILDHL 93 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~--------~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~----di~~~~~~l 93 (313)
++.|||||||..++...|+.+...+.. ..+++++.|+......- ...++.+.++ .+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~-----~g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF-----HGRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc-----ccccHHHHHHHHHHHHHHHHHhh
Confidence 478999999999998887765544421 24889999987753221 1223333333 444444545
Q ss_pred -----CCCeEEEEEeChhHHHHHHHHHhcc---cccceeeEecCCCC
Q 021382 94 -----GLAKVFLVAKDFGALTAYMFAIQHQ---ERVSGVITLGVPIL 132 (313)
Q Consensus 94 -----~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~ 132 (313)
+.++++||||||||.+|..+....+ +.|+.+|.+++|..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 5678999999999999998887543 57999999887654
No 97
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.27 E-value=4e-11 Score=107.50 Aligned_cols=123 Identities=15% Similarity=0.252 Sum_probs=85.4
Q ss_pred eeeee-CCEEEEEEe--cCCCCCCcEEEEECCC---CCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHH
Q 021382 7 KFIKV-QGLNLHIAE--AGADADAHVVVFLHGF---PEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQ 80 (313)
Q Consensus 7 ~~~~~-~g~~i~~~~--~g~~~~~~~ivllHG~---~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 80 (313)
++... +|+.+.+.. .|.. + .-.+-..+ ..+...|..+++.|.+.||.+ ..|++|+|.+.+........+.
T Consensus 71 ~~~~~~~gv~i~vp~~~~g~~--~-i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~ 146 (440)
T PLN02733 71 KTVSLDPKTEIVVPDDRYGLY--A-IDILDPDVIIRLDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMD 146 (440)
T ss_pred ceecCCCCceEEcCCCCCCce--e-eEEecCccccCcchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHH
Confidence 34555 588887654 2321 1 11111111 345578999999998877654 8999999998654321123456
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccc----cceeeEecCCCCC
Q 021382 81 DMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQER----VSGVITLGVPILP 133 (313)
Q Consensus 81 ~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~ 133 (313)
++.+.|.++.+..+.++++|+||||||.++..++..+|+. |+++|.++++...
T Consensus 147 ~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 147 GLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 6666677777777889999999999999999999988874 6788888876543
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.25 E-value=1.4e-09 Score=86.55 Aligned_cols=86 Identities=19% Similarity=0.306 Sum_probs=63.4
Q ss_pred EEEECCCCCchhhHHHH--HHHHHHC--CCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCh
Q 021382 30 VVFLHGFPEIWYSWRHQ--MVGVATA--GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF 105 (313)
Q Consensus 30 ivllHG~~~~~~~w~~~--~~~l~~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~ 105 (313)
|+.||||.++..+...+ ...+.+. ..+++++|++- ......+.+.+++++..-+.+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-------------~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-------------FPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-------------CHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 79999999887766432 2333332 25677777652 3456677888899998877799999999
Q ss_pred hHHHHHHHHHhcccccceeeEecCCC
Q 021382 106 GALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 106 Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
||+.|..+|.+++ +++ ||++++.
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 9999999999986 444 7788654
No 99
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.24 E-value=1.3e-10 Score=91.36 Aligned_cols=88 Identities=25% Similarity=0.399 Sum_probs=60.6
Q ss_pred EEEECCCCCch-hhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHH
Q 021382 30 VVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGAL 108 (313)
Q Consensus 30 ivllHG~~~~~-~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ 108 (313)
|+++||+.++. .+|.+-++.-....++|-.+|+ + ..+++++.+.+.+-+..+. ++.+|||||+|+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D------NPDLDEWVQALDQAIDAID-EPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHH
Confidence 68899998763 4677655444444477777776 1 1257788888877776553 4599999999999
Q ss_pred HHHHHH-HhcccccceeeEecCC
Q 021382 109 TAYMFA-IQHQERVSGVITLGVP 130 (313)
Q Consensus 109 ia~~~a-~~~p~~v~~lvl~~~~ 130 (313)
.+++++ ...+.+|++++|++++
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~ 90 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPF 90 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--
T ss_pred HHHHHHhhcccccccEEEEEcCC
Confidence 999999 7778999999999754
No 100
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.23 E-value=1e-10 Score=97.24 Aligned_cols=98 Identities=17% Similarity=0.210 Sum_probs=80.7
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCC-CEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC-eEEEEEeCh
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAG-FRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA-KVFLVAKDF 105 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~-~~~lvGhS~ 105 (313)
.+|+|+|+.+++...|..+++.|.. . +.|++++.||.+.... ...++++++++..+-|....-+ +++|+|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~-~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPD-DVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTT-TEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCC-CeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCc
Confidence 3799999999999999998888754 4 8999999999984332 2468999999999988887665 999999999
Q ss_pred hHHHHHHHHHhc---ccccceeeEecCC
Q 021382 106 GALTAYMFAIQH---QERVSGVITLGVP 130 (313)
Q Consensus 106 Gg~ia~~~a~~~---p~~v~~lvl~~~~ 130 (313)
||.||..+|.+= -..+..|++++++
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 999999999743 2358889999854
No 101
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.20 E-value=9e-11 Score=120.86 Aligned_cols=98 Identities=13% Similarity=0.050 Sum_probs=85.2
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC-eEEEEEeCh
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA-KVFLVAKDF 105 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~-~~~lvGhS~ 105 (313)
+++++|+||++++...|..+...|. .+++|+++|+||+|.+. ...++++++++++.+.++.+..+ +++++||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~----~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~ 1142 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPM----QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSL 1142 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCCC----CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEech
Confidence 6789999999999999999888875 47999999999998653 23579999999999999987644 899999999
Q ss_pred hHHHHHHHHHh---cccccceeeEecC
Q 021382 106 GALTAYMFAIQ---HQERVSGVITLGV 129 (313)
Q Consensus 106 Gg~ia~~~a~~---~p~~v~~lvl~~~ 129 (313)
||.+|..+|.+ .++++..++++++
T Consensus 1143 Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1143 GGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred hhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 99999999985 5788999998874
No 102
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.14 E-value=5.3e-09 Score=81.01 Aligned_cols=111 Identities=23% Similarity=0.271 Sum_probs=68.8
Q ss_pred ccceeeeeCCEEEEEEecCCC-CCCcEEEEECCCC------CchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCC
Q 021382 4 IEHKFIKVQGLNLHIAEAGAD-ADAHVVVFLHGFP------EIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEK 76 (313)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~-~~~~~ivllHG~~------~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~ 76 (313)
|...+++=.-.++..+...++ ++.|..|.+|=.| .+. .-......|.+.||.++.+|+||-|+|.-.- +
T Consensus 4 ~~~v~i~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nk-vv~~la~~l~~~G~atlRfNfRgVG~S~G~f---D 79 (210)
T COG2945 4 MPTVIINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNK-VVQTLARALVKRGFATLRFNFRGVGRSQGEF---D 79 (210)
T ss_pred CCcEEecCCcccceeccCCCCCCCCceEEecCCCccccCccCCH-HHHHHHHHHHhCCceEEeecccccccccCcc---c
Confidence 334344433234544443332 4567788888443 222 2233456677789999999999999997542 2
Q ss_pred CcHHHHHHHHHHHHHHh---C--CCeEEEEEeChhHHHHHHHHHhccc
Q 021382 77 TSFQDMVDDLLAILDHL---G--LAKVFLVAKDFGALTAYMFAIQHQE 119 (313)
Q Consensus 77 ~~~~~~~~di~~~~~~l---~--~~~~~lvGhS~Gg~ia~~~a~~~p~ 119 (313)
+..-+. +|..+.++-+ . ...+-|.|.|+|++|++.+|.+.|+
T Consensus 80 ~GiGE~-~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 80 NGIGEL-EDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred CCcchH-HHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc
Confidence 333333 3444444443 2 2235689999999999999999876
No 103
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.12 E-value=4.8e-09 Score=84.22 Aligned_cols=116 Identities=22% Similarity=0.307 Sum_probs=74.0
Q ss_pred eeee-CCEEEEEEecCCCC----CCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCC-CCCCCCCCCCCCcHHH
Q 021382 8 FIKV-QGLNLHIAEAGADA----DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GLSDPPAEPEKTSFQD 81 (313)
Q Consensus 8 ~~~~-~g~~i~~~~~g~~~----~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~-G~S~~~~~~~~~~~~~ 81 (313)
.+.+ +|.+|++++.-|.. ..++||+..||+.....|..++.+|..-||+||.||..-| |.|+.. ...+|+..
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~--I~eftms~ 83 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD--INEFTMSI 83 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HHH
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC--hhhcchHH
Confidence 4555 78999998776422 2479999999999999999999999988999999999988 888754 35789988
Q ss_pred HHHHHHHHHHHh---CCCeEEEEEeChhHHHHHHHHHhcccccceeeEe
Q 021382 82 MVDDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (313)
Q Consensus 82 ~~~di~~~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 127 (313)
..+++..+++.+ |+.++-|+..|+.|.||+..|++- .+.-+|+.
T Consensus 84 g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLita 130 (294)
T PF02273_consen 84 GKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITA 130 (294)
T ss_dssp HHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEE
Confidence 888888776665 788999999999999999999953 35555543
No 104
>PRK10115 protease 2; Provisional
Probab=99.10 E-value=6.7e-09 Score=99.23 Aligned_cols=118 Identities=17% Similarity=0.157 Sum_probs=86.0
Q ss_pred eCCEEEEEE-ecCC----CCCCcEEEEECCCCCchh--hHHHHHHHHHHCCCEEEeeCCCCCCCCCCC------CCCCCC
Q 021382 11 VQGLNLHIA-EAGA----DADAHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPP------AEPEKT 77 (313)
Q Consensus 11 ~~g~~i~~~-~~g~----~~~~~~ivllHG~~~~~~--~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~------~~~~~~ 77 (313)
-||.+|.+. ...+ +...|.||.+||.++... .|......|+++||-|+.+..||-|.=... ......
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~ 503 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKN 503 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCC
Confidence 389998863 2211 123589999999988764 366666778889999999999996543211 011235
Q ss_pred cHHHHHHHHHHHHHHh--CCCeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 78 SFQDMVDDLLAILDHL--GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 78 ~~~~~~~di~~~~~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
+++++++-+..++++= .-+++.+.|.|.||.++...+.++|++++++|...
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~v 556 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQV 556 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecC
Confidence 6777776666666552 23579999999999999999999999999999754
No 105
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.09 E-value=1.8e-09 Score=91.42 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=87.0
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHH---CCCEEEeeCCCCCCCCCCC----CCCCCCcHHHHHHHHHHHHHHhCC----
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVAT---AGFRAIAPDCRGYGLSDPP----AEPEKTSFQDMVDDLLAILDHLGL---- 95 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~---~~~~vi~~D~~G~G~S~~~----~~~~~~~~~~~~~di~~~~~~l~~---- 95 (313)
++.|+|+.|.||-..-|.+++..|-+ .++.|+++.+.||-.++.. .+...|+++++++-..++++++-.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 46799999999999888888877753 4799999999999887654 134689999999999998888633
Q ss_pred --CeEEEEEeChhHHHHHHHHHhcc---cccceeeEecC
Q 021382 96 --AKVFLVAKDFGALTAYMFAIQHQ---ERVSGVITLGV 129 (313)
Q Consensus 96 --~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~ 129 (313)
.+++|+|||+|+++++++..+.| .+|.+++++-+
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfP 120 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFP 120 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCC
Confidence 46999999999999999999999 78888888764
No 106
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.08 E-value=8.4e-09 Score=77.36 Aligned_cols=103 Identities=18% Similarity=0.220 Sum_probs=75.9
Q ss_pred cEEEEECCCCCchh--hHHHHHHHHHHCCCEEEeeCCCC-----CCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEE
Q 021382 28 HVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRG-----YGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFL 100 (313)
Q Consensus 28 ~~ivllHG~~~~~~--~w~~~~~~l~~~~~~vi~~D~~G-----~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~l 100 (313)
-+|||-||-+.+.+ ....+...|+..|+.|..+.+|= .|.- +|+.....--..+...+.++.+.+.-.+.++
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r-kPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRR-KPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCC-CCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 37999998876544 45566678888899999998762 3322 2333333344567788888888887779999
Q ss_pred EEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 101 VAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 101 vGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
=||||||.++..++..-.-.|.++++.+-++
T Consensus 94 GGkSmGGR~aSmvade~~A~i~~L~clgYPf 124 (213)
T COG3571 94 GGKSMGGRVASMVADELQAPIDGLVCLGYPF 124 (213)
T ss_pred ccccccchHHHHHHHhhcCCcceEEEecCcc
Confidence 9999999999999876544599999887543
No 107
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.02 E-value=1.4e-09 Score=94.11 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=81.7
Q ss_pred CcEEEEECCCCCchhhHH-----HHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEE
Q 021382 27 AHVVVFLHGFPEIWYSWR-----HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 101 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~-----~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lv 101 (313)
++|++++|=+-.....|+ ..+..|.+.|+.|..+|.++=..+....+..+|-.+.+.+.+..+.+..|.+++.++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inli 186 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLI 186 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCcccccee
Confidence 569999998865554442 245567788999999998876665443333455556666777778888899999999
Q ss_pred EeChhHHHHHHHHHhcccc-cceeeEecCCCC
Q 021382 102 AKDFGALTAYMFAIQHQER-VSGVITLGVPIL 132 (313)
Q Consensus 102 GhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~ 132 (313)
|++.||+++..+++.+|.+ |+++++..++..
T Consensus 187 GyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 187 GYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred eEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 9999999999999999988 999998876543
No 108
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.97 E-value=1.3e-07 Score=81.03 Aligned_cols=242 Identities=15% Similarity=0.177 Sum_probs=129.3
Q ss_pred CCcEEEEECCCCCchhhHHH-H-HHHHHHCCCEEEeeCCCCCCCCCCCCCCC--CCcHHHH-------HH---HHHHHHH
Q 021382 26 DAHVVVFLHGFPEIWYSWRH-Q-MVGVATAGFRAIAPDCRGYGLSDPPAEPE--KTSFQDM-------VD---DLLAILD 91 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~-~-~~~l~~~~~~vi~~D~~G~G~S~~~~~~~--~~~~~~~-------~~---di~~~~~ 91 (313)
.+|.+|.|.|-+++....+. + +..|++.|+.-+.+..|=||.-.+..... -.++.++ +. -+...++
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 47888899999886543332 2 45677779999999999999865432111 1122222 12 2233444
Q ss_pred HhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCCCCChhhHhhhcCchhhHHhhcCcchhhhhccCCcHHHHH
Q 021382 92 HLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPILPPGPIEFHKYLPEGFYISRWQEPGRAEADFGRLDAKTVV 171 (313)
Q Consensus 92 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (313)
+.|..++.+.|-||||.+|...|..+|..+..+-+++.... ...-.+..+.... .|... ..++......+..
T Consensus 171 ~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sA--s~vFt~Gvls~~i---~W~~L---~~q~~~~~~~~~~ 242 (348)
T PF09752_consen 171 REGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSA--SVVFTEGVLSNSI---NWDAL---EKQFEDTVYEEEI 242 (348)
T ss_pred hcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCC--CcchhhhhhhcCC---CHHHH---HHHhcccchhhhh
Confidence 55888999999999999999999999987765555542211 1000000111000 11100 0001000000000
Q ss_pred HHHHhhhcCCCCCCCCchhhhhhcccCCCCCCCCCCHHHHHHHHHHhccCCCCCCCCcccccccccccC-CCCccCCcEE
Q 021382 172 RNIYILFSRSEIPIAPENKEIMDLVSDSTPLPPWFTEEDLAAYGALYEKSGFRTALQVPYRSIHEKFSL-PELTVKVPAL 250 (313)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~P~l 250 (313)
.. ...... . ...... .....+.+.+......+... .+... ..+.-+-.+.
T Consensus 243 ~~---------~~~~~~-~---~~~~~~--~~~~~~~Ea~~~m~~~md~~--------------T~l~nf~~P~dp~~ii 293 (348)
T PF09752_consen 243 SD---------IPAQNK-S---LPLDSM--EERRRDREALRFMRGVMDSF--------------THLTNFPVPVDPSAII 293 (348)
T ss_pred cc---------cccCcc-c---ccchhh--ccccchHHHHHHHHHHHHhh--------------ccccccCCCCCCCcEE
Confidence 00 000000 0 000000 01112223222211111110 01110 1112234589
Q ss_pred EEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCC-CccccChhHHHHHHHHHhhh
Q 021382 251 LILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSH-FVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 251 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH-~~~~e~pe~~~~~i~~fl~~ 311 (313)
+|.+++|.++|.+++. .+++..|++++..+++ || ...+-+.+.|.+.|.+-+++
T Consensus 294 ~V~A~~DaYVPr~~v~------~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 294 FVAAKNDAYVPRHGVL------SLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred EEEecCceEechhhcc------hHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhhC
Confidence 9999999999866543 5789999999999986 99 47777889999999987753
No 109
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.95 E-value=3.8e-09 Score=87.29 Aligned_cols=101 Identities=30% Similarity=0.401 Sum_probs=72.9
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH-HHHHh------CCCeEE
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA-ILDHL------GLAKVF 99 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~-~~~~l------~~~~~~ 99 (313)
=|.|||+||+......|..++..+++.||-||++|+...+.... ........++++.+.+ +-..+ .+.++.
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~--~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~ 94 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDD--TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLA 94 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCc--chhHHHHHHHHHHHHhcchhhccccccccccceE
Confidence 48999999999766667888899999999999999776544211 1112233333333333 11222 456899
Q ss_pred EEEeChhHHHHHHHHHhc-----ccccceeeEecC
Q 021382 100 LVAKDFGALTAYMFAIQH-----QERVSGVITLGV 129 (313)
Q Consensus 100 lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~ 129 (313)
|.|||-||-+|..+++.+ +.++++++++++
T Consensus 95 l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 95 LAGHSRGGKVAFAMALGNASSSLDLRFSALILLDP 129 (259)
T ss_pred EeeeCCCCHHHHHHHhhhcccccccceeEEEEecc
Confidence 999999999999999988 568999999975
No 110
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.94 E-value=1.1e-08 Score=81.39 Aligned_cols=115 Identities=24% Similarity=0.321 Sum_probs=79.5
Q ss_pred CCEEEEEEecCCCCCCc-EEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCC-CCCCCcHHHHH-HHHHH
Q 021382 12 QGLNLHIAEAGADADAH-VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPA-EPEKTSFQDMV-DDLLA 88 (313)
Q Consensus 12 ~g~~i~~~~~g~~~~~~-~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~-~di~~ 88 (313)
||+.+.......+++.+ -|+.--+++.....+++++..+++.||.|+.+|+||-|+|++.. ....+.+.+++ .|+.+
T Consensus 14 DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~a 93 (281)
T COG4757 14 DGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPA 93 (281)
T ss_pred CCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHH
Confidence 78877766665433233 34444445555667788888888899999999999999998652 22357777776 56666
Q ss_pred HHHHh----CCCeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 89 ILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 89 ~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
.++.+ ..-+.++|||||||.+.-.+.+ +| +..+....+
T Consensus 94 al~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG 135 (281)
T COG4757 94 ALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFG 135 (281)
T ss_pred HHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEec
Confidence 66665 3347999999999988766655 44 455554444
No 111
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.92 E-value=1.1e-08 Score=85.34 Aligned_cols=106 Identities=19% Similarity=0.347 Sum_probs=69.1
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHH-HCC--CEE--EeeCCCCC----CC-C---CCC------CCCCCCcHHHHHHHHH
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVA-TAG--FRA--IAPDCRGY----GL-S---DPP------AEPEKTSFQDMVDDLL 87 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~-~~~--~~v--i~~D~~G~----G~-S---~~~------~~~~~~~~~~~~~di~ 87 (313)
..|.||+|||.++..++..++..+. +.+ -.+ +-++-=|. |. + ..| .+...-++...+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4689999999999999999999886 333 223 23333332 21 1 111 1111136788888888
Q ss_pred HHHHHh----CCCeEEEEEeChhHHHHHHHHHhccc-----ccceeeEecCCCC
Q 021382 88 AILDHL----GLAKVFLVAKDFGALTAYMFAIQHQE-----RVSGVITLGVPIL 132 (313)
Q Consensus 88 ~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 132 (313)
.+|..| +++++-+|||||||.++..|+..+-. ++..+|.|++++.
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 888887 78999999999999999999987532 6899999987654
No 112
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.92 E-value=1e-09 Score=89.23 Aligned_cols=88 Identities=20% Similarity=0.208 Sum_probs=53.6
Q ss_pred cEEEEECCCCC-chhhHHHHHHHHHHCCCE---EEeeCCCCCCCCCCCCCC--CCCcHHHHHHHHHHHHHHhCCCeEEEE
Q 021382 28 HVVVFLHGFPE-IWYSWRHQMVGVATAGFR---AIAPDCRGYGLSDPPAEP--EKTSFQDMVDDLLAILDHLGLAKVFLV 101 (313)
Q Consensus 28 ~~ivllHG~~~-~~~~w~~~~~~l~~~~~~---vi~~D~~G~G~S~~~~~~--~~~~~~~~~~di~~~~~~l~~~~~~lv 101 (313)
.||||+||..+ ....|..+.+.|++.||. |++++.-....+...... ..-+..++++-|.++++.-|- |+-||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 37999999998 667899999999999999 899996433322111100 011223555555566666688 99999
Q ss_pred EeChhHHHHHHHHHh
Q 021382 102 AKDFGALTAYMFAIQ 116 (313)
Q Consensus 102 GhS~Gg~ia~~~a~~ 116 (313)
||||||+++-.|...
T Consensus 81 gHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 81 GHSMGGTIARYYIKG 95 (219)
T ss_dssp EETCHHHHHHHHHHH
T ss_pred EcCCcCHHHHHHHHH
Confidence 999999998888754
No 113
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.88 E-value=3.5e-08 Score=83.21 Aligned_cols=96 Identities=17% Similarity=0.319 Sum_probs=57.7
Q ss_pred CcEEEEECCCCCchhh---HHHHHHHHHHCCCEEEeeCCC----CCCCCCCCCCCCCCcHHHHHHHHHHHHHHh------
Q 021382 27 AHVVVFLHGFPEIWYS---WRHQMVGVATAGFRAIAPDCR----GYGLSDPPAEPEKTSFQDMVDDLLAILDHL------ 93 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~---w~~~~~~l~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~di~~~~~~l------ 93 (313)
...||||-|..+.-.+ ...++..|...++.|+-+-++ |+|.+ ++++=++||.++++.|
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~---------SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS---------SLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc---------hhhhHHHHHHHHHHHHHHhhcc
Confidence 3489999999875544 344556665568998887654 44443 4555566666655544
Q ss_pred --CCCeEEEEEeChhHHHHHHHHHhc-c----cccceeeEecCCC
Q 021382 94 --GLAKVFLVAKDFGALTAYMFAIQH-Q----ERVSGVITLGVPI 131 (313)
Q Consensus 94 --~~~~~~lvGhS~Gg~ia~~~a~~~-p----~~v~~lvl~~~~~ 131 (313)
+-+|++|+|||-|+--++.|.... + ..|.++||.++..
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 356899999999999999998764 2 6799999987543
No 114
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.88 E-value=2.5e-08 Score=81.33 Aligned_cols=115 Identities=18% Similarity=0.211 Sum_probs=83.0
Q ss_pred eCCEEEEEEecCCC---CCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCC----C-C---------
Q 021382 11 VQGLNLHIAEAGAD---ADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPP----A-E--------- 73 (313)
Q Consensus 11 ~~g~~i~~~~~g~~---~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~----~-~--------- 73 (313)
.+|.+|+-+..=+. ...|.||-.||.++....|++++ .++..||.|++.|-||.|.|+.. + .
T Consensus 64 ~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtr 142 (321)
T COG3458 64 YGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTR 142 (321)
T ss_pred cCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccc-cccccceeEEEEecccCCCccccCCCCCCCCcCCceeEe
Confidence 37888886643321 23588999999999988887654 34556999999999999988431 1 1
Q ss_pred -----CCCCcHHHHHHHHHHHHHHh------CCCeEEEEEeChhHHHHHHHHHhcccccceeeEe
Q 021382 74 -----PEKTSFQDMVDDLLAILDHL------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (313)
Q Consensus 74 -----~~~~~~~~~~~di~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 127 (313)
.+.|-+...-.|+...++.+ .-+++.+.|.|-||.|++..++..| ++++++..
T Consensus 143 GilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~ 206 (321)
T COG3458 143 GILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVAD 206 (321)
T ss_pred ecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccc
Confidence 12333444555665555554 3457999999999999999999887 78888864
No 115
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.87 E-value=2.7e-08 Score=82.79 Aligned_cols=100 Identities=17% Similarity=0.182 Sum_probs=82.4
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC-CCeEEEEEeChh
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAKDFG 106 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~-~~~~~lvGhS~G 106 (313)
||+.|+|+..++...|..+...+.. ..+|+..+-||+|.-..+ .-+++++++...+-|.+.. -.+++|+|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-~~~v~~l~a~g~~~~~~~----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-LLPVYGLQAPGYGAGEQP----FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-CceeeccccCcccccccc----cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 5899999999999999988888865 599999999999864322 3489999999998888875 348999999999
Q ss_pred HHHHHHHHHhc---ccccceeeEecCCCC
Q 021382 107 ALTAYMFAIQH---QERVSGVITLGVPIL 132 (313)
Q Consensus 107 g~ia~~~a~~~---p~~v~~lvl~~~~~~ 132 (313)
|.+|+.+|.+= -+.|..++++++...
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999642 347888999986543
No 116
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.86 E-value=2.5e-07 Score=81.81 Aligned_cols=128 Identities=23% Similarity=0.307 Sum_probs=90.6
Q ss_pred ccceeeee-CCEEEEEEecCCC-CCCcEEEEECCCCCchhhHHHH------HHHHHHCCCEEEeeCCCCCCCCCCC----
Q 021382 4 IEHKFIKV-QGLNLHIAEAGAD-ADAHVVVFLHGFPEIWYSWRHQ------MVGVATAGFRAIAPDCRGYGLSDPP---- 71 (313)
Q Consensus 4 ~~~~~~~~-~g~~i~~~~~g~~-~~~~~ivllHG~~~~~~~w~~~------~~~l~~~~~~vi~~D~~G~G~S~~~---- 71 (313)
.|...+++ ||+-+........ ..+|||+|.||..+++..|--. .-.|+..||.|-.-..||--.|.+.
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~ 127 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLS 127 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccC
Confidence 34444444 8886666554332 4579999999999999999533 1244567999999999997777543
Q ss_pred CC----CCCCcHHHHH-HHHHHH----HHHhCCCeEEEEEeChhHHHHHHHHHhccc---ccceeeEecCCC
Q 021382 72 AE----PEKTSFQDMV-DDLLAI----LDHLGLAKVFLVAKDFGALTAYMFAIQHQE---RVSGVITLGVPI 131 (313)
Q Consensus 72 ~~----~~~~~~~~~~-~di~~~----~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 131 (313)
+. ...+++.+++ -||-+. ++.-+.++.+.||||-|+.+...+....|+ +|+.+++++++.
T Consensus 128 ~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 128 PSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred CcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 11 1245666644 344444 444478899999999999999999988876 788888887544
No 117
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.85 E-value=2.2e-08 Score=91.31 Aligned_cols=123 Identities=15% Similarity=0.185 Sum_probs=83.6
Q ss_pred eeeeeC----CEEEEEEecC---CCCCCcEEEEECCCCCchhhHHHHHH-----------HH------HHCCCEEEeeCC
Q 021382 7 KFIKVQ----GLNLHIAEAG---ADADAHVVVFLHGFPEIWYSWRHQMV-----------GV------ATAGFRAIAPDC 62 (313)
Q Consensus 7 ~~~~~~----g~~i~~~~~g---~~~~~~~ivllHG~~~~~~~w~~~~~-----------~l------~~~~~~vi~~D~ 62 (313)
-+++++ +.+++|+-.. +..+.|.||+++|.|+++..+-.+.+ .+ -.+..+++.+|+
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDq 129 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQ 129 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeC
Confidence 456663 4577776443 22357999999999999876532110 01 013478999997
Q ss_pred C-CCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-------CCCeEEEEEeChhHHHHHHHHHhc----------cccccee
Q 021382 63 R-GYGLSDPPAEPEKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQH----------QERVSGV 124 (313)
Q Consensus 63 ~-G~G~S~~~~~~~~~~~~~~~~di~~~~~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~l 124 (313)
| |+|.|.........+.++.++|+.++++.+ +..+++|+||||||..+..+|..- +-.++++
T Consensus 130 P~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi 209 (462)
T PTZ00472 130 PAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGL 209 (462)
T ss_pred CCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEE
Confidence 5 888886433223456788999999998854 457899999999999998888642 1245677
Q ss_pred eEecC
Q 021382 125 ITLGV 129 (313)
Q Consensus 125 vl~~~ 129 (313)
++-++
T Consensus 210 ~IGNg 214 (462)
T PTZ00472 210 AVGNG 214 (462)
T ss_pred EEecc
Confidence 76543
No 118
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.83 E-value=2.5e-07 Score=89.21 Aligned_cols=80 Identities=18% Similarity=0.138 Sum_probs=62.4
Q ss_pred HHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC--------------------CCeEEEEEeChh
Q 021382 47 MVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG--------------------LAKVFLVAKDFG 106 (313)
Q Consensus 47 ~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~--------------------~~~~~lvGhS~G 106 (313)
...++.+||.|+..|.||+|.|+.... .+. .+-.+|..++|+-+. -.++.++|.|||
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 456778899999999999999975421 222 344566666666554 358999999999
Q ss_pred HHHHHHHHHhcccccceeeEecC
Q 021382 107 ALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 107 g~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
|.+++.+|+..|+.++++|.+++
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~ 371 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAA 371 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCC
Confidence 99999999999999999997653
No 119
>PRK04940 hypothetical protein; Provisional
Probab=98.80 E-value=1.9e-07 Score=72.96 Aligned_cols=85 Identities=16% Similarity=0.259 Sum_probs=50.0
Q ss_pred EEEECCCCCchhh--HHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh---C-CCeEEEEEe
Q 021382 30 VVFLHGFPEIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---G-LAKVFLVAK 103 (313)
Q Consensus 30 ivllHG~~~~~~~--w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l---~-~~~~~lvGh 103 (313)
||.||||.+|..+ ..- ..+ +.+-+|-+=+-.| ..+..+-++.+.++++++ + .++..|||.
T Consensus 2 IlYlHGF~SS~~S~~~Ka--~~l-----~~~~p~~~~~~l~-------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKV--LQL-----QFIDPDVRLISYS-------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHH--Hhh-----eeeCCCCeEEECC-------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7899999998776 422 111 1223333322111 012222233444444432 1 257999999
Q ss_pred ChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 104 DFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 104 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
|+||+-|..+|.++. +++ ||++++.
T Consensus 68 SLGGyyA~~La~~~g--~~a-VLiNPAv 92 (180)
T PRK04940 68 GLGGYWAERIGFLCG--IRQ-VIFNPNL 92 (180)
T ss_pred ChHHHHHHHHHHHHC--CCE-EEECCCC
Confidence 999999999999985 544 5578654
No 120
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.78 E-value=2.8e-08 Score=81.44 Aligned_cols=90 Identities=18% Similarity=0.202 Sum_probs=51.1
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHH---HC-CCEEEeeCCCCC-----CCCCC------------C------CC---CCC
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVA---TA-GFRAIAPDCRGY-----GLSDP------------P------AE---PEK 76 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~---~~-~~~vi~~D~~G~-----G~S~~------------~------~~---~~~ 76 (313)
++-||||||++.+...|+.+...|. .+ ++.++.+|=|=- |-... + .. ...
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 5789999999999999988776553 23 688888875421 11100 0 00 012
Q ss_pred CcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 77 TSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 77 ~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
..+++-.+.|.+++++.|- =..|+|.|.||.+|..+++..
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~ 123 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQ 123 (212)
T ss_dssp ---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHH
Confidence 3466677777788887763 357999999999999998654
No 121
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.76 E-value=3.4e-08 Score=80.33 Aligned_cols=98 Identities=27% Similarity=0.414 Sum_probs=68.6
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHh-------CCCeEE
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPE-KTSFQDMVDDLLAILDHL-------GLAKVF 99 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~di~~~~~~l-------~~~~~~ 99 (313)
|.|+|+|||.-....|..++..++..||-||||++-.- . .+.... .-+....++.+..-+..+ +++|+.
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~-~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kla 123 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--F-PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLA 123 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--c-CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEE
Confidence 78999999998887888888999999999999998752 2 121111 112233334444333332 467999
Q ss_pred EEEeChhHHHHHHHHHhccc--ccceeeEec
Q 021382 100 LVAKDFGALTAYMFAIQHQE--RVSGVITLG 128 (313)
Q Consensus 100 lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~ 128 (313)
++|||+||-.|..+|+.+.- .+.+||-++
T Consensus 124 l~GHSrGGktAFAlALg~a~~lkfsaLIGiD 154 (307)
T PF07224_consen 124 LSGHSRGGKTAFALALGYATSLKFSALIGID 154 (307)
T ss_pred EeecCCccHHHHHHHhcccccCchhheeccc
Confidence 99999999999999998742 345555554
No 122
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.75 E-value=2e-07 Score=76.02 Aligned_cols=103 Identities=14% Similarity=0.150 Sum_probs=68.1
Q ss_pred CcEEEEECCCCCchhhHHHH--HHHHHH-CCCEEEeeCCCCCC--CCCCC--C--CC-CCCcHHHHHHHHHHHHHHhCCC
Q 021382 27 AHVVVFLHGFPEIWYSWRHQ--MVGVAT-AGFRAIAPDCRGYG--LSDPP--A--EP-EKTSFQDMVDDLLAILDHLGLA 96 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~--~~~l~~-~~~~vi~~D~~G~G--~S~~~--~--~~-~~~~~~~~~~di~~~~~~l~~~ 96 (313)
.|.||+|||...+...+... +..+++ .+|-|+.|+...-. ...+. . .. .......+++-+.++.++.+++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 47899999999988776542 234443 47889999864211 11110 0 00 1112223333444455666665
Q ss_pred --eEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 97 --KVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 97 --~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
++++.|+|.||+.+..++..|||.+.++...+.
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecc
Confidence 799999999999999999999999999887653
No 123
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.68 E-value=1.9e-08 Score=87.49 Aligned_cols=103 Identities=15% Similarity=0.198 Sum_probs=61.8
Q ss_pred CCcEEEEECCCCCch--hhHHH-HHHHHHH---CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh------
Q 021382 26 DAHVVVFLHGFPEIW--YSWRH-QMVGVAT---AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL------ 93 (313)
Q Consensus 26 ~~~~ivllHG~~~~~--~~w~~-~~~~l~~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l------ 93 (313)
..|++|++|||.++. ..|-. +...+.. ..++||++|....-.. ...............|..+++.|
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 578999999998876 45754 3444544 3689999997532111 00000011223334444444443
Q ss_pred CCCeEEEEEeChhHHHHHHHHHhccc--ccceeeEecCC
Q 021382 94 GLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVITLGVP 130 (313)
Q Consensus 94 ~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 130 (313)
..+++||||||+||.||-..+..... ++.+++-++++
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPA 186 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPA 186 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcc
Confidence 45789999999999999999988777 89999988754
No 124
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.68 E-value=2e-07 Score=75.83 Aligned_cols=93 Identities=17% Similarity=0.149 Sum_probs=69.5
Q ss_pred EECCC--CCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-hCCCeEEEEEeChhHH
Q 021382 32 FLHGF--PEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH-LGLAKVFLVAKDFGAL 108 (313)
Q Consensus 32 llHG~--~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~-l~~~~~~lvGhS~Gg~ 108 (313)
|+|+- +++...|..+...+.. .++|+++|++|+|.+.... .++..+++.+.+.+.. .+..+++++||||||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 44543 3666789888877754 6899999999999775432 3677777766654443 4567899999999999
Q ss_pred HHHHHHHh---cccccceeeEecC
Q 021382 109 TAYMFAIQ---HQERVSGVITLGV 129 (313)
Q Consensus 109 ia~~~a~~---~p~~v~~lvl~~~ 129 (313)
++..++.+ .++.+.++++++.
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEcc
Confidence 99999886 3467888988764
No 125
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.67 E-value=1.6e-07 Score=81.30 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=61.1
Q ss_pred CcEEEEECCCCCchhh--------------H----HHHHHHHHHCCCEEEeeCCCCCCCCCCCCCC---CCCcHHHHHH-
Q 021382 27 AHVVVFLHGFPEIWYS--------------W----RHQMVGVATAGFRAIAPDCRGYGLSDPPAEP---EKTSFQDMVD- 84 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~--------------w----~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~- 84 (313)
-|+||++||-++..+. | ..+...|++.||-|+++|.+|+|........ ..++...++.
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 4799999998765422 1 1346678889999999999999987544211 1233333322
Q ss_pred --------------HHHHHHHHhC------CCeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 85 --------------DLLAILDHLG------LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 85 --------------di~~~~~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
|....++.|. -+++.++|+||||..++.+|+.. ++|++.|..+
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~ 257 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANG 257 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhh
Confidence 2223445442 35799999999999999999986 5898888665
No 126
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.65 E-value=1.6e-07 Score=80.15 Aligned_cols=115 Identities=16% Similarity=0.196 Sum_probs=74.7
Q ss_pred CCEEEEEEecCC--C--CCCcEEEEECCCCCch-hhHHHH-H-H-------HHHHCCCEEEeeCCCCCCCCCCCCCCCCC
Q 021382 12 QGLNLHIAEAGA--D--ADAHVVVFLHGFPEIW-YSWRHQ-M-V-------GVATAGFRAIAPDCRGYGLSDPPAEPEKT 77 (313)
Q Consensus 12 ~g~~i~~~~~g~--~--~~~~~ivllHG~~~~~-~~w~~~-~-~-------~l~~~~~~vi~~D~~G~G~S~~~~~~~~~ 77 (313)
||++|+.-.+-+ . ..-|+||..|+++.+. ..+... . . .++++||-||..|.||.|.|+-....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~--- 77 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP--- 77 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T---
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc---
Confidence 577777654322 2 2347899999998643 112211 0 1 27788999999999999999754321
Q ss_pred cHHHHHHHHHHHHHHh---CC--CeEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 78 SFQDMVDDLLAILDHL---GL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 78 ~~~~~~~di~~~~~~l---~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
....-++|..++|+=+ .+ .++.++|.|++|++++..|+..|..+++++...+
T Consensus 78 ~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~ 134 (272)
T PF02129_consen 78 MSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG 134 (272)
T ss_dssp TSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE
T ss_pred CChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc
Confidence 1344566666655554 33 3799999999999999999988999999997653
No 127
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.62 E-value=1.7e-07 Score=76.97 Aligned_cols=89 Identities=16% Similarity=0.166 Sum_probs=51.9
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHH--CCCEEEeeCCCCCCCCCCC-CCCCCCcHHHHHHHHHHHHHHhCCC--eEEEE
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVAT--AGFRAIAPDCRGYGLSDPP-AEPEKTSFQDMVDDLLAILDHLGLA--KVFLV 101 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~--~~~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~~di~~~~~~l~~~--~~~lv 101 (313)
...|||+||+.++..+|......+.. ..+.--.+...++-..... .++-...-.+++++|.+.++....+ ++++|
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfI 83 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFI 83 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEE
Confidence 45799999999999999766555543 1222112222333211111 1111123334566666666655544 89999
Q ss_pred EeChhHHHHHHHHH
Q 021382 102 AKDFGALTAYMFAI 115 (313)
Q Consensus 102 GhS~Gg~ia~~~a~ 115 (313)
||||||.|+-.+..
T Consensus 84 gHSLGGli~r~al~ 97 (217)
T PF05057_consen 84 GHSLGGLIARYALG 97 (217)
T ss_pred EecccHHHHHHHHH
Confidence 99999999865443
No 128
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.61 E-value=1.3e-07 Score=82.88 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=78.2
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCE---EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeC
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFR---AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 104 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS 104 (313)
-|++++||+..+...|..+...+...++- ++.++.++-..+ ....-.-+++..-|.+++...+-+++.++|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGT----YSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCC----ccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 48999999988888888766666555665 888888866221 11233556677777788888888999999999
Q ss_pred hhHHHHHHHHHhcc--cccceeeEecCCC
Q 021382 105 FGALTAYMFAIQHQ--ERVSGVITLGVPI 131 (313)
Q Consensus 105 ~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 131 (313)
|||.++..++...+ .+|++++.++++-
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 99999999999888 8999999988653
No 129
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.56 E-value=1.3e-07 Score=77.53 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHh-CC--CeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 82 MVDDLLAILDHL-GL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 82 ~~~di~~~~~~l-~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+-++..+++.+. .+ +++.|+|.|.||-+|+.+|.++| .|+++|.++++
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps 55 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPS 55 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCc
Confidence 445555666655 33 58999999999999999999999 89999988743
No 130
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.55 E-value=4.1e-07 Score=75.42 Aligned_cols=104 Identities=20% Similarity=0.206 Sum_probs=63.9
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHH-CCC--EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH----hCCCeE
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVAT-AGF--RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH----LGLAKV 98 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~-~~~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~----l~~~~~ 98 (313)
++..+||+|||..+...-...+..+.. .++ .+|.+..|..|.-.. ......+...-+..+.++++. .+.+++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~-Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLG-YFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhh-hhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 467999999999875543222222221 223 799999999886311 000112333334445555554 467899
Q ss_pred EEEEeChhHHHHHHHHHh----cc-----cccceeeEecCC
Q 021382 99 FLVAKDFGALTAYMFAIQ----HQ-----ERVSGVITLGVP 130 (313)
Q Consensus 99 ~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvl~~~~ 130 (313)
+|++||||+.+.+..... .+ .++..+++.++.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 999999999999887543 11 256677776643
No 131
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.52 E-value=1.8e-06 Score=67.72 Aligned_cols=104 Identities=17% Similarity=0.199 Sum_probs=65.8
Q ss_pred EEecCCCCCCcEEEEECCCC---CchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH----HH
Q 021382 18 IAEAGADADAHVVVFLHGFP---EIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA----IL 90 (313)
Q Consensus 18 ~~~~g~~~~~~~ivllHG~~---~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~----~~ 90 (313)
+-.+|++...+..||+||.- ++..+=..+...+...||+|.+.+ ||.+.. ..++.+...+... ++
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q-----~htL~qt~~~~~~gv~fil 129 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQ-----VHTLEQTMTQFTHGVNFIL 129 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCcc-----cccHHHHHHHHHHHHHHHH
Confidence 44566544468999999973 221121223333446799999875 787742 2355555555444 34
Q ss_pred HHh-CCCeEEEEEeChhHHHHHHHHHh-cccccceeeEecC
Q 021382 91 DHL-GLAKVFLVAKDFGALTAYMFAIQ-HQERVSGVITLGV 129 (313)
Q Consensus 91 ~~l-~~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~ 129 (313)
+.. ..+++.+-|||-|+.++.....+ +..+|.++++.+.
T Consensus 130 k~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~G 170 (270)
T KOG4627|consen 130 KYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCG 170 (270)
T ss_pred HhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhh
Confidence 443 45678899999999999887654 4458888887653
No 132
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.48 E-value=2.7e-07 Score=81.94 Aligned_cols=103 Identities=24% Similarity=0.268 Sum_probs=59.4
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCC-CC-CCCCCCC------------------------CCCcH-
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY-GL-SDPPAEP------------------------EKTSF- 79 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~-G~-S~~~~~~------------------------~~~~~- 79 (313)
=|.|||-||++++...+..+...|++.||=|+++|+|.. +- +....+. ....+
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 489999999999999999999999999999999999943 11 0000000 00000
Q ss_pred ---HHH---HHHHHHHHHHh--------------------------CCCeEEEEEeChhHHHHHHHHHhcccccceeeEe
Q 021382 80 ---QDM---VDDLLAILDHL--------------------------GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (313)
Q Consensus 80 ---~~~---~~di~~~~~~l--------------------------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 127 (313)
.++ +.|+..+++.+ ..+++.++|||+||..+...+... .+++..|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 011 23333333332 245799999999999999887765 678888888
Q ss_pred cCC
Q 021382 128 GVP 130 (313)
Q Consensus 128 ~~~ 130 (313)
++-
T Consensus 259 D~W 261 (379)
T PF03403_consen 259 DPW 261 (379)
T ss_dssp S--
T ss_pred CCc
Confidence 753
No 133
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.46 E-value=9.6e-05 Score=66.32 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=59.0
Q ss_pred HHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-----CCCeEEEEEeChhHHHHHHHHHhcccc
Q 021382 46 QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-----GLAKVFLVAKDFGALTAYMFAIQHQER 120 (313)
Q Consensus 46 ~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 120 (313)
+-..|. .|+.||.+.+.= .|. ..-|+.+.+.-..+|++.. +-.|.+|+|+--||+.++.+|+.+|+.
T Consensus 93 vG~AL~-~GHPvYFV~F~p-----~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 93 VGVALR-AGHPVYFVGFFP-----EPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred HHHHHH-cCCCeEEEEecC-----CCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 444554 589999887641 121 2348888777777777775 234899999999999999999999999
Q ss_pred cceeeEecCCC
Q 021382 121 VSGVITLGVPI 131 (313)
Q Consensus 121 v~~lvl~~~~~ 131 (313)
+..+|+-|+|.
T Consensus 165 ~gplvlaGaPl 175 (581)
T PF11339_consen 165 VGPLVLAGAPL 175 (581)
T ss_pred cCceeecCCCc
Confidence 99999877654
No 134
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.43 E-value=1.2e-06 Score=71.73 Aligned_cols=91 Identities=23% Similarity=0.349 Sum_probs=57.5
Q ss_pred EEEECCCC---CchhhHHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH----HHHH-----hCCC
Q 021382 30 VVFLHGFP---EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA----ILDH-----LGLA 96 (313)
Q Consensus 30 ivllHG~~---~~~~~w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~----~~~~-----l~~~ 96 (313)
||++||.+ ++..........+++ .|+.|+.+|.|=... .++....+|+.+ +++. ...+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~---------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE---------APFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT---------SSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc---------ccccccccccccceeeecccccccccccc
Confidence 78999885 333333344555654 799999999994311 233344455544 4443 2346
Q ss_pred eEEEEEeChhHHHHHHHHHhcccc----cceeeEecC
Q 021382 97 KVFLVAKDFGALTAYMFAIQHQER----VSGVITLGV 129 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~ 129 (313)
+++|+|+|-||.+|+.++....+. +++++++++
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p 108 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISP 108 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESC
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccc
Confidence 899999999999999999866553 788888764
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.42 E-value=3.8e-06 Score=66.47 Aligned_cols=98 Identities=16% Similarity=0.330 Sum_probs=70.1
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCC--------CCCCCCCC---------CCCCCCcHHHHHHHHHHH
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCR--------GYGLSDPP---------AEPEKTSFQDMVDDLLAI 89 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~--------G~G~S~~~---------~~~~~~~~~~~~~di~~~ 89 (313)
..+||++||.+++...|..++..|.-.+...|+|-.| |.+...+- .+ +.-++...++-+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~-d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE-DEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch-hhhHHHHHHHHHHHH
Confidence 3589999999999999988777765556778888433 22111110 11 233566777888888
Q ss_pred HHHh---CC--CeEEEEEeChhHHHHHHHHHhcccccceee
Q 021382 90 LDHL---GL--AKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (313)
Q Consensus 90 ~~~l---~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 125 (313)
+++. |+ +++.+-|.||||.+|+..+..+|..+.+++
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~ 122 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIF 122 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceee
Confidence 8875 44 468999999999999999999976666555
No 136
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.42 E-value=1.5e-05 Score=76.93 Aligned_cols=123 Identities=16% Similarity=0.220 Sum_probs=85.0
Q ss_pred cceeeeeCCEEEEEEecCC---C-C-CCcEEEEECCCCCch-------hhHHHHHHHHHHCCCEEEeeCCCCCCCCCCC-
Q 021382 5 EHKFIKVQGLNLHIAEAGA---D-A-DAHVVVFLHGFPEIW-------YSWRHQMVGVATAGFRAIAPDCRGYGLSDPP- 71 (313)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~---~-~-~~~~ivllHG~~~~~-------~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~- 71 (313)
+...+..+|...++...-| . . .=|.+|.+||.|++. ..|..+ .....++-|+.+|-||-|.....
T Consensus 499 ~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 499 EFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred eeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhH
Confidence 3455666999998876543 1 1 236788999999732 246544 23457899999999999875432
Q ss_pred -----CCCCCCcHHHHHHHHHHHHHHhCC--CeEEEEEeChhHHHHHHHHHhccccccee-eEecC
Q 021382 72 -----AEPEKTSFQDMVDDLLAILDHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGV-ITLGV 129 (313)
Q Consensus 72 -----~~~~~~~~~~~~~di~~~~~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l-vl~~~ 129 (313)
..-....+.++..-+..+++..-+ +++.+.|+|.||.+++.+....|+.+.+. +.+++
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaP 642 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAP 642 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecc
Confidence 112234566666666666666544 47999999999999999999998666555 65543
No 137
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.42 E-value=4.8e-06 Score=69.32 Aligned_cols=123 Identities=19% Similarity=0.167 Sum_probs=81.6
Q ss_pred eeeeeCCEEEEEEecCC---CCCCcEEEEECCCCCchhhHHHHH--HHHHH-CCCEEEeeCCC-C------CCCCCCCC-
Q 021382 7 KFIKVQGLNLHIAEAGA---DADAHVVVFLHGFPEIWYSWRHQM--VGVAT-AGFRAIAPDCR-G------YGLSDPPA- 72 (313)
Q Consensus 7 ~~~~~~g~~i~~~~~g~---~~~~~~ivllHG~~~~~~~w~~~~--~~l~~-~~~~vi~~D~~-G------~G~S~~~~- 72 (313)
..+.++|.+-.|+.+-+ +...|.||+|||-.++..-.+... ..|++ .+|-|+.||-- + +|.+-.+.
T Consensus 38 ~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 38 ASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD 117 (312)
T ss_pred cccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc
Confidence 34566777777765432 123468999999987754332221 23332 57999999522 1 22221111
Q ss_pred -CCCCCcHHHHHHHHHHHHHHhCCC--eEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 73 -EPEKTSFQDMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 73 -~~~~~~~~~~~~di~~~~~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
......+..+++.+..++.+.+++ ++++.|.|=||.++.+++..+|+.+.++-.+..
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg 177 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAG 177 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeec
Confidence 111234555666777777888888 799999999999999999999999999887753
No 138
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.37 E-value=2.8e-06 Score=67.74 Aligned_cols=114 Identities=19% Similarity=0.270 Sum_probs=66.7
Q ss_pred eeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhh-HHHHHHHHHHCCCEEEeeCCCCCC--CCCC-CCC-----CCCCc
Q 021382 8 FIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYS-WRHQMVGVATAGFRAIAPDCRGYG--LSDP-PAE-----PEKTS 78 (313)
Q Consensus 8 ~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~-w~~~~~~l~~~~~~vi~~D~~G~G--~S~~-~~~-----~~~~~ 78 (313)
..++.|..-++ .|+..+...||.+--+.+-... =+..+..++..||.|+.||+. .| .|.. ... ....+
T Consensus 22 ~~~v~gldaYv--~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~-~Gdp~~~~~~~~~~~~w~~~~~ 98 (242)
T KOG3043|consen 22 EEEVGGLDAYV--VGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFF-RGDPWSPSLQKSERPEWMKGHS 98 (242)
T ss_pred eEeecCeeEEE--ecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhh-cCCCCCCCCChhhhHHHHhcCC
Confidence 34455655543 4543333467777655443322 345566677779999999986 34 1211 000 01223
Q ss_pred HHHHHHHHHHHHHHh---C-CCeEEEEEeChhHHHHHHHHHhcccccceee
Q 021382 79 FQDMVDDLLAILDHL---G-LAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (313)
Q Consensus 79 ~~~~~~di~~~~~~l---~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 125 (313)
.+..-.++..+++.+ | .+++-++|.-|||.++..+....| .+.+.|
T Consensus 99 ~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v 148 (242)
T KOG3043|consen 99 PPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGV 148 (242)
T ss_pred cccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeee
Confidence 334445566555555 4 568999999999988877777766 455544
No 139
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.37 E-value=1e-05 Score=68.86 Aligned_cols=105 Identities=17% Similarity=0.206 Sum_probs=74.0
Q ss_pred eeeeCCEEEEEEecCC--CCCCcEEEEECCCCCchhhH------HHHHHHH-HHCCCEEEeeCCCCCCCCCCCCCCCCCc
Q 021382 8 FIKVQGLNLHIAEAGA--DADAHVVVFLHGFPEIWYSW------RHQMVGV-ATAGFRAIAPDCRGYGLSDPPAEPEKTS 78 (313)
Q Consensus 8 ~~~~~g~~i~~~~~g~--~~~~~~ivllHG~~~~~~~w------~~~~~~l-~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (313)
.|+.|++.|--..... .++.-.||+.-|.+++.+.- +..+..+ ...+-+|+.+.+||.|.|..+. +
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-----s 190 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-----S 190 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----C
Confidence 5667888877554431 12345899999998776651 1123223 2357899999999999996432 4
Q ss_pred HHHHHHHHHHHHHHh-----CC--CeEEEEEeChhHHHHHHHHHhc
Q 021382 79 FQDMVDDLLAILDHL-----GL--AKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 79 ~~~~~~di~~~~~~l-----~~--~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
..+++.|-.+.++.| |+ +++++-|||+||.|+.....++
T Consensus 191 ~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 678888887777776 23 5799999999999998755544
No 140
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.36 E-value=3e-06 Score=68.71 Aligned_cols=104 Identities=19% Similarity=0.194 Sum_probs=73.7
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCC-----CEEEeeCCCCC----CCCCCCC---------CCCCCcHHHHHHHHHHH
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAG-----FRAIAPDCRGY----GLSDPPA---------EPEKTSFQDMVDDLLAI 89 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~-----~~vi~~D~~G~----G~S~~~~---------~~~~~~~~~~~~di~~~ 89 (313)
-|.|||||++++..+...++..|..++ -=++..|--|- |.=++.. ....-+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 389999999999999998888887642 12455555551 1111110 01234677778888888
Q ss_pred HHHh----CCCeEEEEEeChhHHHHHHHHHhccc-----ccceeeEecCCC
Q 021382 90 LDHL----GLAKVFLVAKDFGALTAYMFAIQHQE-----RVSGVITLGVPI 131 (313)
Q Consensus 90 ~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~ 131 (313)
|..| +++++-+|||||||.-...|+..|-+ .+..+|.++.++
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 8877 78999999999999999999987642 567888777543
No 141
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.35 E-value=1.5e-05 Score=62.69 Aligned_cols=94 Identities=23% Similarity=0.269 Sum_probs=69.4
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCCeEEEEEeC
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVFLVAKD 104 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l----~~~~~~lvGhS 104 (313)
.+||+-|=++....=..+...|.++|+.|+.+|-+=|=.+.+ |.++.+.|+.++++.. +.++++|+|.|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r-------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER-------TPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC-------CHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 466777655543222346788989999999999888877643 4556777777766664 78899999999
Q ss_pred hhHHHHHHHHHhcc----cccceeeEecC
Q 021382 105 FGALTAYMFAIQHQ----ERVSGVITLGV 129 (313)
Q Consensus 105 ~Gg~ia~~~a~~~p----~~v~~lvl~~~ 129 (313)
+|+-|......+-| ++|+.++|++.
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSP 105 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEecc
Confidence 99987777766655 47788888864
No 142
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.32 E-value=3.3e-06 Score=71.13 Aligned_cols=104 Identities=11% Similarity=0.136 Sum_probs=64.6
Q ss_pred CcEEEEECCCCCchhhHH--HHHHHHHHCC----CEEEeeCCCCCCCC--CCC---------C-CCCCCcH-HHHHHHHH
Q 021382 27 AHVVVFLHGFPEIWYSWR--HQMVGVATAG----FRAIAPDCRGYGLS--DPP---------A-EPEKTSF-QDMVDDLL 87 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~--~~~~~l~~~~----~~vi~~D~~G~G~S--~~~---------~-~~~~~~~-~~~~~di~ 87 (313)
-|+|+++||.......|. ..+..+...+ .-+|+++.-+.+.- +.. . ......+ .-+.++|.
T Consensus 24 ~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~ 103 (251)
T PF00756_consen 24 YPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELI 103 (251)
T ss_dssp EEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHH
T ss_pred CEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccch
Confidence 479999999733222332 2223333322 45677777666511 110 0 0111122 34557777
Q ss_pred HHHHHh-CCCe--EEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 88 AILDHL-GLAK--VFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 88 ~~~~~l-~~~~--~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
..|++. ++.+ ..|+|+||||..|+.++.+||+.+.+++.+++.
T Consensus 104 p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 104 PYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 776664 4333 699999999999999999999999999988743
No 143
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.29 E-value=0.00023 Score=62.01 Aligned_cols=99 Identities=17% Similarity=0.151 Sum_probs=62.3
Q ss_pred CCcEEEEECCCC---CchhhH-HHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH---HhC--CC
Q 021382 26 DAHVVVFLHGFP---EIWYSW-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD---HLG--LA 96 (313)
Q Consensus 26 ~~~~ivllHG~~---~~~~~w-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~---~l~--~~ 96 (313)
..|+||++||.+ ++.... ......+...|+.|+++|.|---.-.. ...+++..+-+.-+.+ +++ .+
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-----p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF-----PAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-----CchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 468999999885 333333 334444455799999999995433322 2233332222222332 244 45
Q ss_pred eEEEEEeChhHHHHHHHHHhccc----ccceeeEecC
Q 021382 97 KVFLVAKDFGALTAYMFAIQHQE----RVSGVITLGV 129 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~ 129 (313)
++.++|+|-||.+++.++..-.+ ...+.+++.+
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P 189 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISP 189 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 79999999999999999987554 3456666653
No 144
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.28 E-value=5.8e-05 Score=60.33 Aligned_cols=58 Identities=19% Similarity=0.420 Sum_probs=43.9
Q ss_pred ccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 244 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 244 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
.+++|+|.|.|+.|.+++... +..+.+.++++.+..-+ +||+++-.+ ...+.|.+|+.
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~------s~~L~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSER------SEQLAESFKDATVLEHP-GGHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred CCCCCeeEEecccceeecchH------HHHHHHhcCCCeEEecC-CCccCCCch--HHHHHHHHHHH
Confidence 588999999999999997542 34577888999777776 699988776 44455555553
No 145
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.25 E-value=2.9e-06 Score=73.09 Aligned_cols=93 Identities=24% Similarity=0.296 Sum_probs=65.7
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCC--CCCCCCCCC-----------CCCcHHHHHHHHHHH----
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGY--GLSDPPAEP-----------EKTSFQDMVDDLLAI---- 89 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~--G~S~~~~~~-----------~~~~~~~~~~di~~~---- 89 (313)
-|.|++-||.+++...|....+.+++.||-|.++|+||- |........ ..+.+..+.+.+.+.
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 478999999999999999899999999999999999993 444332111 112233333333322
Q ss_pred --HHHhCCCeEEEEEeChhHHHHHHHHHhccc
Q 021382 90 --LDHLGLAKVFLVAKDFGALTAYMFAIQHQE 119 (313)
Q Consensus 90 --~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 119 (313)
-.++...++.++|||+||+.++.++.-..+
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhcccccc
Confidence 122345689999999999999999865543
No 146
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.23 E-value=0.00055 Score=59.59 Aligned_cols=100 Identities=20% Similarity=0.198 Sum_probs=67.5
Q ss_pred CCcEEEEECCCCCc-----hhhHHHHHHHHH-HCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH----h--
Q 021382 26 DAHVVVFLHGFPEI-----WYSWRHQMVGVA-TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH----L-- 93 (313)
Q Consensus 26 ~~~~ivllHG~~~~-----~~~w~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~----l-- 93 (313)
..|.||++||++-. +..++.+...++ ..+.-|+++|+|=--....| -.+++-.+-+.-+.+. .
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P-----a~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP-----AAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC-----ccchHHHHHHHHHHHhHHHHhCC
Confidence 35899999998633 344666665553 35688999999854333222 2344544445555553 2
Q ss_pred CCCeEEEEEeChhHHHHHHHHHhc------ccccceeeEecCC
Q 021382 94 GLAKVFLVAKDFGALTAYMFAIQH------QERVSGVITLGVP 130 (313)
Q Consensus 94 ~~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~ 130 (313)
+.+++.|+|=|-||.||..+|.+. +-++++.|++-+.
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 456899999999999999988643 3578899988654
No 147
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.22 E-value=5e-05 Score=61.62 Aligned_cols=125 Identities=18% Similarity=0.200 Sum_probs=90.1
Q ss_pred ccceeeeeCCEEEEEEecCC-----CCCCcEEEEECCCCCchhhHHHHHHHHHH---CCCEEEeeCCCCCCCCC---CC-
Q 021382 4 IEHKFIKVQGLNLHIAEAGA-----DADAHVVVFLHGFPEIWYSWRHQMVGVAT---AGFRAIAPDCRGYGLSD---PP- 71 (313)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~-----~~~~~~ivllHG~~~~~~~w~~~~~~l~~---~~~~vi~~D~~G~G~S~---~~- 71 (313)
|+.++++..|..++....++ ..+++-|+++.|.||...-|.++...|.. ++++++.+-..||-.-. +.
T Consensus 1 m~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~ 80 (301)
T KOG3975|consen 1 MTEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLRED 80 (301)
T ss_pred CcceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccc
Confidence 34567777777766654442 23567899999999998888877766643 34779999999986532 11
Q ss_pred ---CCCCCCcHHHHHHHHHHHHHHh--CCCeEEEEEeChhHHHHHHHHHh-cc-cccceeeEec
Q 021382 72 ---AEPEKTSFQDMVDDLLAILDHL--GLAKVFLVAKDFGALTAYMFAIQ-HQ-ERVSGVITLG 128 (313)
Q Consensus 72 ---~~~~~~~~~~~~~di~~~~~~l--~~~~~~lvGhS~Gg~ia~~~a~~-~p-~~v~~lvl~~ 128 (313)
...+.++++++++--.+|+++. .-.|++++|||-|+++.+.+... .+ -.|.+.+++-
T Consensus 81 ~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LF 144 (301)
T KOG3975|consen 81 HSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLF 144 (301)
T ss_pred cccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEec
Confidence 1224689999999999999987 34589999999999999998763 23 2566666654
No 148
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.10 E-value=9.6e-05 Score=67.51 Aligned_cols=105 Identities=17% Similarity=0.233 Sum_probs=67.2
Q ss_pred CcEEEEECCCCCchhh-H--HHHHHHHHH-CCCEEEeeCCCCCCCCCCCCC-----CCCCcHHHHHHHHHHHHHHhC--C
Q 021382 27 AHVVVFLHGFPEIWYS-W--RHQMVGVAT-AGFRAIAPDCRGYGLSDPPAE-----PEKTSFQDMVDDLLAILDHLG--L 95 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~-w--~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~di~~~~~~l~--~ 95 (313)
+| |+|.-|.-+.... | ...+..|++ -+--+|++.+|-||.|.+..+ ..-.|.++-.+|+..|++.+. .
T Consensus 29 gp-ifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GP-IFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SE-EEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CC-EEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 54 5555566554432 2 123334443 356799999999999975422 123588888899999998874 1
Q ss_pred -----CeEEEEEeChhHHHHHHHHHhcccccceeeEecCCCC
Q 021382 96 -----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPIL 132 (313)
Q Consensus 96 -----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (313)
.|++++|-|+||++|..+-.+||+.+.+.+..+++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 2799999999999999999999999999998776543
No 149
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.09 E-value=3.4e-05 Score=59.41 Aligned_cols=90 Identities=20% Similarity=0.270 Sum_probs=64.2
Q ss_pred cEEEEECCCCCch-hhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChh
Q 021382 28 HVVVFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFG 106 (313)
Q Consensus 28 ~~ivllHG~~~~~-~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~G 106 (313)
+.+|.+||+.+|. ..|....+.-.. .+-.+++. +.....++++++.+.+-+... -++++||+||+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~---------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQD---------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccC---------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEeccc
Confidence 4689999997765 458765543211 11112221 223457888888888877777 345999999999
Q ss_pred HHHHHHHHHhcccccceeeEecCC
Q 021382 107 ALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 107 g~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+.++..++......|+++.|++++
T Consensus 70 c~~v~h~~~~~~~~V~GalLVApp 93 (181)
T COG3545 70 CATVAHWAEHIQRQVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHHhhhhccceEEEecCC
Confidence 999999999877799999999754
No 150
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.08 E-value=3.4e-05 Score=69.48 Aligned_cols=103 Identities=15% Similarity=0.204 Sum_probs=64.9
Q ss_pred CCcEEEEECCCCCc--hhhHHHHHHHHHHCC----CEEEeeCCCCC-CCCCCCCCCCCCcHHHHHHHHHHHHHHh-----
Q 021382 26 DAHVVVFLHGFPEI--WYSWRHQMVGVATAG----FRAIAPDCRGY-GLSDPPAEPEKTSFQDMVDDLLAILDHL----- 93 (313)
Q Consensus 26 ~~~~ivllHG~~~~--~~~w~~~~~~l~~~~----~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~di~~~~~~l----- 93 (313)
.-|.|+|+||-.-. ...+ ..+..|.+.| .-++.+|..+- .++.... ....-...++++|.-.+++.
T Consensus 208 ~~PvlyllDG~~w~~~~~~~-~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~-~~~~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVW-PALDSLTHRGQLPPAVYLLIDAIDTTHRSQELP-CNADFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCCEEEEEECHHhhhcCCHH-HHHHHHHHcCCCCceEEEEECCCCcccccccCC-chHHHHHHHHHHHHHHHHHhCCCCC
Confidence 35889999996421 1122 2344554444 34788886321 1111101 01112334567777777764
Q ss_pred CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 94 GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 94 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.-++.+|+|+||||..|+.++.+||+++.+++.+++.
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 2346899999999999999999999999999987643
No 151
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.06 E-value=4.5e-05 Score=65.54 Aligned_cols=71 Identities=24% Similarity=0.276 Sum_probs=43.5
Q ss_pred HHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC---CeEEEEEeChhHHHHHHHHHh
Q 021382 46 QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL---AKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 46 ~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~---~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
.+..++++||-|+++|..|.|..=.......+.+-+.+.-..++...+|+ .++.+.|||-||.-+...|..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 34556678999999999999972111111123333333333333333343 379999999999888766643
No 152
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=98.02 E-value=1.4e-05 Score=57.76 Aligned_cols=44 Identities=20% Similarity=0.483 Sum_probs=28.1
Q ss_pred ccceeeeeCCEEEEEEecC-CCCCCcEEEEECCCCCchhhHHHHH
Q 021382 4 IEHKFIKVQGLNLHIAEAG-ADADAHVVVFLHGFPEIWYSWRHQM 47 (313)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g-~~~~~~~ivllHG~~~~~~~w~~~~ 47 (313)
+.+...+++|++||+...- +.++..||||+||||+|...|..++
T Consensus 68 ~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 68 FPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp S-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred CCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 4455677899999987653 3345679999999999988887653
No 153
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.02 E-value=2e-05 Score=66.80 Aligned_cols=96 Identities=17% Similarity=0.259 Sum_probs=64.8
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH-HHHHhCC--CeEEEEEeC
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA-ILDHLGL--AKVFLVAKD 104 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~-~~~~l~~--~~~~lvGhS 104 (313)
.-|||.-|-.+=.+. .++..-++.||.|+-+.+|||+.|...+-+ ..+.. -+|.+.+ .|..||. +.+++.|+|
T Consensus 244 ~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p-~n~~n-A~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYP-VNTLN-AADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred eEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCc-ccchH-HHHHHHHHHHHHcCCCccceEEEEee
Confidence 367777776542211 122222456899999999999999754322 22322 2333333 4566664 579999999
Q ss_pred hhHHHHHHHHHhcccccceeeEec
Q 021382 105 FGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 105 ~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
.||+-+...|..||| |+++||-.
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeec
Confidence 999999999999996 99999743
No 154
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.02 E-value=6.9e-05 Score=62.42 Aligned_cols=114 Identities=16% Similarity=0.204 Sum_probs=69.5
Q ss_pred CCEEEEEEecCC-----CCCC-cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCC-------CCCCCCCCC---
Q 021382 12 QGLNLHIAEAGA-----DADA-HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG-------LSDPPAEPE--- 75 (313)
Q Consensus 12 ~g~~i~~~~~g~-----~~~~-~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G-------~S~~~~~~~--- 75 (313)
-|..+-|+-.-+ ++.- |-|||+||.+.....-+.+ +. .+.--|+.+.|=++ .+....+.+
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~---l~-sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t 245 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKV---LS-SGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT 245 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhh---hh-cCccceeeecccCceEEEccccccccccccccc
Confidence 355666664432 2233 7899999998655443322 22 24444555555444 111111111
Q ss_pred CCcHHHHHHHHH-HHHHHhCCC--eEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 76 KTSFQDMVDDLL-AILDHLGLA--KVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 76 ~~~~~~~~~di~-~~~~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
..-.....+.+. .+.++.+|+ +++++|.|+||+-++.++.++||.+.+.++++.
T Consensus 246 ~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 246 LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 112333444444 345556776 699999999999999999999999999999864
No 155
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.99 E-value=4.8e-05 Score=68.18 Aligned_cols=82 Identities=21% Similarity=0.299 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHCCCEE-----Ee-eCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh---CCCeEEEEEeChhHHHHHH
Q 021382 42 SWRHQMVGVATAGFRA-----IA-PDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL---GLAKVFLVAKDFGALTAYM 112 (313)
Q Consensus 42 ~w~~~~~~l~~~~~~v-----i~-~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l---~~~~~~lvGhS~Gg~ia~~ 112 (313)
.|..+++.|.+.||.. .+ +|.|= | +. ..+++...+.++++.. .-+|++||||||||.++..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~---~~----~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---S---PA----ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---c---hh----hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHH
Confidence 6889999998766532 22 66661 1 11 2334444444444443 3579999999999999999
Q ss_pred HHHhccc------ccceeeEecCCCCC
Q 021382 113 FAIQHQE------RVSGVITLGVPILP 133 (313)
Q Consensus 113 ~a~~~p~------~v~~lvl~~~~~~~ 133 (313)
+....+. .|+++|.++++...
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 9887743 59999999877653
No 156
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.93 E-value=0.00011 Score=68.78 Aligned_cols=108 Identities=17% Similarity=0.199 Sum_probs=60.5
Q ss_pred CCEEEEEEecCC--------CCCCcEEEEECCCCCchhhHHHHHHHHH----------------HCCCEEEeeCCCCCCC
Q 021382 12 QGLNLHIAEAGA--------DADAHVVVFLHGFPEIWYSWRHQMVGVA----------------TAGFRAIAPDCRGYGL 67 (313)
Q Consensus 12 ~g~~i~~~~~g~--------~~~~~~ivllHG~~~~~~~w~~~~~~l~----------------~~~~~vi~~D~~G~G~ 67 (313)
+-+.++.+..|. +.+|-||+|+.|..||...=+-++-... ...|+..+.|+=+
T Consensus 66 ~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE--- 142 (973)
T KOG3724|consen 66 DKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE--- 142 (973)
T ss_pred CceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc---
Confidence 445666555552 1257799999999888543332221111 1235666666543
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHh-----C--------CCeEEEEEeChhHHHHHHHHHhcccccceee
Q 021382 68 SDPPAEPEKTSFQDMVDDLLAILDHL-----G--------LAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (313)
Q Consensus 68 S~~~~~~~~~~~~~~~~di~~~~~~l-----~--------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 125 (313)
.....+.-++.++++-+.+.|+.. | -+.+++|||||||+||...+. +|..+.+.|
T Consensus 143 --e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~sV 210 (973)
T KOG3724|consen 143 --EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGSV 210 (973)
T ss_pred --hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccchh
Confidence 111123446666665555544432 2 124999999999999987654 444444433
No 157
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.91 E-value=3e-05 Score=70.77 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=74.3
Q ss_pred CcEEEEECCCCCch-----hhHHHH--HHHHHHCCCEEEeeCCCCCCCCCCC------CCCCCCcHHHHHHHHHHHHHHh
Q 021382 27 AHVVVFLHGFPEIW-----YSWRHQ--MVGVATAGFRAIAPDCRGYGLSDPP------AEPEKTSFQDMVDDLLAILDHL 93 (313)
Q Consensus 27 ~~~ivllHG~~~~~-----~~w~~~--~~~l~~~~~~vi~~D~~G~G~S~~~------~~~~~~~~~~~~~di~~~~~~l 93 (313)
=|+++++=|.|+-. ..|-.. +..|++.||-|+++|.||-..-... .......++++++-+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 37999999998632 223222 2466778999999999997654321 1123446778888888888888
Q ss_pred C---CCeEEEEEeChhHHHHHHHHHhcccccceee
Q 021382 94 G---LAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (313)
Q Consensus 94 ~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 125 (313)
| .+++.+-|||+||.+++...++||+-++..|
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAI 756 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAI 756 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEe
Confidence 5 5689999999999999999999998777666
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=97.86 E-value=6e-05 Score=57.40 Aligned_cols=89 Identities=20% Similarity=0.313 Sum_probs=66.3
Q ss_pred EEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHH
Q 021382 30 VVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALT 109 (313)
Q Consensus 30 ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~i 109 (313)
||.||||.+|-.+...++. . ..+..|-|-.+.|.+.. ...+...++.+..++.+++-+...|||-|+||.-
T Consensus 2 ilYlHGFnSSP~shka~l~--~----q~~~~~~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLL--L----QFIDEDVRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcccHHHHHH--H----HHHhccccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 8999999988777765431 1 22344556666665432 2368889999999999999778999999999999
Q ss_pred HHHHHHhcccccceeeEecCC
Q 021382 110 AYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 110 a~~~a~~~p~~v~~lvl~~~~ 130 (313)
|.+++.++- +++++ ++++
T Consensus 73 At~l~~~~G--irav~-~NPa 90 (191)
T COG3150 73 ATWLGFLCG--IRAVV-FNPA 90 (191)
T ss_pred HHHHHHHhC--Chhhh-cCCC
Confidence 999999874 66666 4543
No 159
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.84 E-value=0.00011 Score=63.02 Aligned_cols=102 Identities=19% Similarity=0.198 Sum_probs=61.4
Q ss_pred CCcEEEEECCCCCchhh--HHHHHHHHHHCC--CEEEeeCCCCCCCCC-CC--CCCCCCcHHHHHHHHHHHHHHhCCCeE
Q 021382 26 DAHVVVFLHGFPEIWYS--WRHQMVGVATAG--FRAIAPDCRGYGLSD-PP--AEPEKTSFQDMVDDLLAILDHLGLAKV 98 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~--w~~~~~~l~~~~--~~vi~~D~~G~G~S~-~~--~~~~~~~~~~~~~di~~~~~~l~~~~~ 98 (313)
++..+||+|||+.+-.. ++ .++-....+ .-.|.+-.|--|.-- -. .+...|+-+.+..-|..+.+..+.+++
T Consensus 115 ~k~vlvFvHGfNntf~dav~R-~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYR-TAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCeEEEEEcccCCchhHHHHH-HHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 46799999999875332 22 222222223 456777777655421 00 111245555566656666666678899
Q ss_pred EEEEeChhHHHHHHHHHh--------cccccceeeEec
Q 021382 99 FLVAKDFGALTAYMFAIQ--------HQERVSGVITLG 128 (313)
Q Consensus 99 ~lvGhS~Gg~ia~~~a~~--------~p~~v~~lvl~~ 128 (313)
+|++||||.++.+....+ -+.+++-+||-.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAa 231 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAA 231 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeC
Confidence 999999999998876532 233567777654
No 160
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.75 E-value=0.00035 Score=63.36 Aligned_cols=122 Identities=15% Similarity=0.155 Sum_probs=79.5
Q ss_pred eeeeeC---CEEEEEEecCC---CCCCcEEEEECCCCCchhhHHHHHHHH-----H--------------HCCCEEEeeC
Q 021382 7 KFIKVQ---GLNLHIAEAGA---DADAHVVVFLHGFPEIWYSWRHQMVGV-----A--------------TAGFRAIAPD 61 (313)
Q Consensus 7 ~~~~~~---g~~i~~~~~g~---~~~~~~ivllHG~~~~~~~w~~~~~~l-----~--------------~~~~~vi~~D 61 (313)
-+++++ +.+++|+-... ..+.|.||++.|.|+++..|..+.+ . . .+..+++.+|
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e-~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD 92 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGE-NGPFRINPDGPYTLEDNPYSWNKFANLLFID 92 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCT-TSSEEEETTSTSEEEE-TT-GGGTSEEEEE-
T ss_pred EEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccc-cCceEEeecccccccccccccccccceEEEe
Confidence 356664 77888875442 2357999999999999988854321 1 1 1246899999
Q ss_pred CC-CCCCCCCCCCC-CCCcHHHHHHHHHHHHHHh-------CCCeEEEEEeChhHHHHHHHHH----hc------ccccc
Q 021382 62 CR-GYGLSDPPAEP-EKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAI----QH------QERVS 122 (313)
Q Consensus 62 ~~-G~G~S~~~~~~-~~~~~~~~~~di~~~~~~l-------~~~~~~lvGhS~Gg~ia~~~a~----~~------p~~v~ 122 (313)
+| |.|.|-..... ...+.++.|+|+.++|+.+ .-.+++|.|-|+||.-+..+|. .. +-.++
T Consensus 93 ~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLk 172 (415)
T PF00450_consen 93 QPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLK 172 (415)
T ss_dssp -STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEE
T ss_pred ecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccc
Confidence 55 99999654322 2357888999999988886 4448999999999987766664 23 23467
Q ss_pred eeeEecC
Q 021382 123 GVITLGV 129 (313)
Q Consensus 123 ~lvl~~~ 129 (313)
++++.++
T Consensus 173 Gi~IGng 179 (415)
T PF00450_consen 173 GIAIGNG 179 (415)
T ss_dssp EEEEESE
T ss_pred cceecCc
Confidence 8886554
No 161
>PLN02606 palmitoyl-protein thioesterase
Probab=97.71 E-value=0.0002 Score=60.67 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=63.6
Q ss_pred CcEEEEECCCC--CchhhHHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---hCCCeEEE
Q 021382 27 AHVVVFLHGFP--EIWYSWRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKVFL 100 (313)
Q Consensus 27 ~~~ivllHG~~--~~~~~w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~---l~~~~~~l 100 (313)
..|||+.||++ .+...+..+.+.+.+ .+..+.++- .|-|.. +.--..+.++++.+.+-+.. +. +-+++
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~----~s~~~~~~~Qv~~vce~l~~~~~L~-~G~na 99 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ----DSLFMPLRQQASIACEKIKQMKELS-EGYNI 99 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc----cccccCHHHHHHHHHHHHhcchhhc-CceEE
Confidence 35899999998 444466666665532 255555554 332321 10112445555555544443 32 35999
Q ss_pred EEeChhHHHHHHHHHhccc--ccceeeEecCC
Q 021382 101 VAKDFGALTAYMFAIQHQE--RVSGVITLGVP 130 (313)
Q Consensus 101 vGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 130 (313)
||+|-||.++-.++.+.|+ .|+.+|.++.+
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999987 59999988754
No 162
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.71 E-value=0.0027 Score=55.07 Aligned_cols=122 Identities=11% Similarity=0.146 Sum_probs=73.5
Q ss_pred eeeeeCCEEEEEEecC--CCCCCcEEEEECCCCCchhhHHH----HHHHHHHCCCEEEeeCCCC--CCCCCC--------
Q 021382 7 KFIKVQGLNLHIAEAG--ADADAHVVVFLHGFPEIWYSWRH----QMVGVATAGFRAIAPDCRG--YGLSDP-------- 70 (313)
Q Consensus 7 ~~~~~~g~~i~~~~~g--~~~~~~~ivllHG~~~~~~~w~~----~~~~l~~~~~~vi~~D~~G--~G~S~~-------- 70 (313)
..++.++.++-..... .....-.||+|||++.+. +|.. +-..|...|...+++.+|. -..+..
T Consensus 65 ~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~-d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 65 QWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHP-DWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred EEeecCCEEEEEEEecccCCCCceEEEEecCCCCCC-CcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 3455566655433222 111223899999998875 3433 3346667899999999987 111000
Q ss_pred C--CCC--CC-------------CcH----HHHHHHHHH---HHHHhCCCeEEEEEeChhHHHHHHHHHhccc-ccceee
Q 021382 71 P--AEP--EK-------------TSF----QDMVDDLLA---ILDHLGLAKVFLVAKDFGALTAYMFAIQHQE-RVSGVI 125 (313)
Q Consensus 71 ~--~~~--~~-------------~~~----~~~~~di~~---~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lv 125 (313)
+ .+. .. -.. ..+..-|.+ +..+.+.++++||||+.|+..+..|....+. .+.++|
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV 223 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALV 223 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEE
Confidence 0 000 00 011 122223333 4444466679999999999999999998864 589999
Q ss_pred EecC
Q 021382 126 TLGV 129 (313)
Q Consensus 126 l~~~ 129 (313)
++++
T Consensus 224 ~I~a 227 (310)
T PF12048_consen 224 LINA 227 (310)
T ss_pred EEeC
Confidence 9985
No 163
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.67 E-value=8.3e-05 Score=53.30 Aligned_cols=60 Identities=18% Similarity=0.286 Sum_probs=49.9
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
+.|+|+|.++.|++.|.+. ++.+++.+++++++.+++.||......-.-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~------a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEG------ARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHH------HHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 5899999999999998643 34678889999999999999998865456678899999863
No 164
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.63 E-value=0.00036 Score=60.85 Aligned_cols=103 Identities=18% Similarity=0.216 Sum_probs=72.6
Q ss_pred cEEEEECCCCCchhhHHH---HHHHHHH-CCCEEEeeCCCCCCCCCCCCCC--------CCCcHHHHHHHHHHHHHHhCC
Q 021382 28 HVVVFLHGFPEIWYSWRH---QMVGVAT-AGFRAIAPDCRGYGLSDPPAEP--------EKTSFQDMVDDLLAILDHLGL 95 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~---~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~--------~~~~~~~~~~di~~~~~~l~~ 95 (313)
-||+|--|--++.+.|.. ++-.++. .+--+|..++|=||+|-+-... .-.|.++-..|.++++..|+-
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 479999999877655432 1112222 2456999999999999754221 112555555677777777643
Q ss_pred ------CeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 96 ------AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 96 ------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.+++.+|-|+|||+|..+-.+||..|.+....++|
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 37999999999999999999999999888765544
No 165
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.60 E-value=0.00026 Score=65.86 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=63.5
Q ss_pred CCcEEEEECCCC---CchhhHHHHHHHHHHC-C-CEEEeeCCC----CCCCCCCCCCCCCCcHHHHH---HHHHHHHHHh
Q 021382 26 DAHVVVFLHGFP---EIWYSWRHQMVGVATA-G-FRAIAPDCR----GYGLSDPPAEPEKTSFQDMV---DDLLAILDHL 93 (313)
Q Consensus 26 ~~~~ivllHG~~---~~~~~w~~~~~~l~~~-~-~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~---~di~~~~~~l 93 (313)
..|+||++||.+ ++...+. ...+... + +-|++++.| |++.+........+.+.++. +.+.+-++.+
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~~--~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLYP--GDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCEEEEEcCCccccCCCCCCC--hHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 468999999964 2222221 1233332 3 899999999 44433222111233444443 3344455556
Q ss_pred CCC--eEEEEEeChhHHHHHHHHHh--cccccceeeEecCC
Q 021382 94 GLA--KVFLVAKDFGALTAYMFAIQ--HQERVSGVITLGVP 130 (313)
Q Consensus 94 ~~~--~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 130 (313)
|.+ +++|+|+|-||..+..++.. .+..++++|+.+..
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 654 79999999999999988876 34578888877643
No 166
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.55 E-value=0.002 Score=56.65 Aligned_cols=47 Identities=15% Similarity=0.281 Sum_probs=38.0
Q ss_pred HHHHHHHHHHh---CCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 83 VDDLLAILDHL---GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 83 ~~di~~~~~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.|-+.+++++. .+++|+|.|.|==|..++..|+ -+.||++++-+...
T Consensus 156 MD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid 205 (367)
T PF10142_consen 156 MDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVID 205 (367)
T ss_pred HHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEc
Confidence 35555677666 7899999999999999999999 55799999966543
No 167
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.55 E-value=0.0004 Score=63.78 Aligned_cols=115 Identities=16% Similarity=0.157 Sum_probs=78.1
Q ss_pred CCEEEEEEecCCC--CCCcEEEEECCCCCchhh---HH--HHHH---HHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHH
Q 021382 12 QGLNLHIAEAGAD--ADAHVVVFLHGFPEIWYS---WR--HQMV---GVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQD 81 (313)
Q Consensus 12 ~g~~i~~~~~g~~--~~~~~ivllHG~~~~~~~---w~--~~~~---~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (313)
||++|+..++=+. ...|+++..+=+|-...+ +. ...+ .+++.||-||..|.||.|.|+-.-+. .++ .+
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~-~~~-~E 105 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP-ESS-RE 105 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-ecc-cc
Confidence 9999997765442 235788888844433331 11 1112 35678999999999999999754221 122 12
Q ss_pred H--HHHHHHHHHHhCC--CeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 82 M--VDDLLAILDHLGL--AKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 82 ~--~~di~~~~~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
. .-|+++.+.+..+ .++..+|-|++|+..+.+|+..|..+++++...
T Consensus 106 ~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~ 156 (563)
T COG2936 106 AEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTE 156 (563)
T ss_pred ccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccc
Confidence 1 2355555555533 479999999999999999999988898888654
No 168
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.53 E-value=0.00012 Score=61.42 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=55.0
Q ss_pred CcEEEEECCCCCch---hhHHHHHHHHHH--CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC-C-CeEE
Q 021382 27 AHVVVFLHGFPEIW---YSWRHQMVGVAT--AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-L-AKVF 99 (313)
Q Consensus 27 ~~~ivllHG~~~~~---~~w~~~~~~l~~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~-~-~~~~ 99 (313)
-.|||+.||++++. ..+..+...+.+ .|-.|+++++ |-|.++-.....--.+.++++.+.+.+..-. + +-++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 34899999998753 234433322221 3678888885 4433210000011245666666776666532 1 3599
Q ss_pred EEEeChhHHHHHHHHHhccc-ccceeeEecCC
Q 021382 100 LVAKDFGALTAYMFAIQHQE-RVSGVITLGVP 130 (313)
Q Consensus 100 lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 130 (313)
+||+|=||.+.-.++.+.|+ .|..+|.++.+
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 99999999999999999875 79999988754
No 169
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.52 E-value=0.0065 Score=50.77 Aligned_cols=64 Identities=13% Similarity=0.264 Sum_probs=49.8
Q ss_pred ccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCcccc-ChhHHHHHHHHHh
Q 021382 244 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQ-SPEEVNQLVLTFL 309 (313)
Q Consensus 244 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e-~pe~~~~~i~~fl 309 (313)
..++|.|+++++.|.+++.+.+++.... .++.--.++.+.+++++|..|+. +|++-.+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~--~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEE--ARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHH--HHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4568999999999999998777665432 23323337888899999987766 8999999999885
No 170
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.51 E-value=0.0053 Score=50.61 Aligned_cols=56 Identities=14% Similarity=0.329 Sum_probs=46.0
Q ss_pred EEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCC-CccccChhHHHHHHHHHhhh
Q 021382 249 ALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSH-FVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 249 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH-~~~~e~pe~~~~~i~~fl~~ 311 (313)
+.++..++|.++|-.++. .+.+..|++++..++ +|| ...+-+-+.|.+.|.+-|.+
T Consensus 309 ~ivv~A~~D~Yipr~gv~------~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVR------SLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcH------HHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 667789999999866654 467889999999999 799 47777889999999988764
No 171
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.51 E-value=0.00035 Score=54.04 Aligned_cols=51 Identities=20% Similarity=0.325 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHh----CCCeEEEEEeChhHHHHHHHHHhccc----ccceeeEecCC
Q 021382 80 QDMVDDLLAILDHL----GLAKVFLVAKDFGALTAYMFAIQHQE----RVSGVITLGVP 130 (313)
Q Consensus 80 ~~~~~di~~~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~ 130 (313)
..+...+...+++. ...+++++|||+||.+|..++...+. ....++..+++
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 34445555555544 56789999999999999999988765 45556655544
No 172
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.45 E-value=0.001 Score=56.51 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=62.8
Q ss_pred CcEEEEECCCCCchhh--HHHHHHHHHH-CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---hCCCeEEE
Q 021382 27 AHVVVFLHGFPEIWYS--WRHQMVGVAT-AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKVFL 100 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~--w~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~---l~~~~~~l 100 (313)
..|+|+.||++++... -..+.+.+.. .|..++++-. |.+. .+.--..+.++++.+.+-+.. +. +-+++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~--~~s~~~~~~~Qve~vce~l~~~~~l~-~G~na 98 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV--GDSWLMPLTQQAEIACEKVKQMKELS-QGYNI 98 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc--cccceeCHHHHHHHHHHHHhhchhhh-CcEEE
Confidence 3589999999876543 2222222222 2566666643 3331 111223555666665554444 32 35999
Q ss_pred EEeChhHHHHHHHHHhccc--ccceeeEecCC
Q 021382 101 VAKDFGALTAYMFAIQHQE--RVSGVITLGVP 130 (313)
Q Consensus 101 vGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 130 (313)
||+|-||.++-.++.+.|+ .|..+|.++.+
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999987 59999988754
No 173
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.44 E-value=0.00018 Score=63.91 Aligned_cols=88 Identities=18% Similarity=0.351 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHCCCE------EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHH
Q 021382 41 YSWRHQMVGVATAGFR------AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFA 114 (313)
Q Consensus 41 ~~w~~~~~~l~~~~~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a 114 (313)
..|..+++.|..=||. -..||.| +|-...+..+-++.++..-|+...+.-|.+|++||+|||||.+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwR---ls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWR---LSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchh---hccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 3789999988765554 5667777 221122222345666666666666666889999999999999999999
Q ss_pred Hhccc--------ccceeeEecCCC
Q 021382 115 IQHQE--------RVSGVITLGVPI 131 (313)
Q Consensus 115 ~~~p~--------~v~~lvl~~~~~ 131 (313)
..+++ .+++++-++++.
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred hcccccchhHHHHHHHHHHccCchh
Confidence 98876 456777666543
No 174
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.43 E-value=0.00055 Score=51.93 Aligned_cols=40 Identities=13% Similarity=0.279 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcc
Q 021382 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 118 (313)
..++.+.+.+++++.+-.++++.|||+||.+|..+++...
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 3356677777777777678999999999999999998643
No 175
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.37 E-value=0.0016 Score=58.34 Aligned_cols=106 Identities=16% Similarity=0.208 Sum_probs=75.5
Q ss_pred CCcEEEEECCCCCchhhHHH----HHHHHH-HCCCEEEeeCCCCCCCCCCCCCCC-----CCcHHHHHHHHHHHHHHhCC
Q 021382 26 DAHVVVFLHGFPEIWYSWRH----QMVGVA-TAGFRAIAPDCRGYGLSDPPAEPE-----KTSFQDMVDDLLAILDHLGL 95 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~----~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~-----~~~~~~~~~di~~~~~~l~~ 95 (313)
++|.-|+|=|=+.....|-. .+..++ +-|-.|+..++|=||+|.+..+.. -.|..+...|+++||++++.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 46666666554433333411 111222 336789999999999996543322 23677888999999999843
Q ss_pred -------CeEEEEEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 96 -------AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 96 -------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
.|++.+|-|+-|.++..+-++||+.+.+-|..++|.
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 279999999999999999999999999999766543
No 176
>COG0627 Predicted esterase [General function prediction only]
Probab=97.36 E-value=0.00078 Score=58.24 Aligned_cols=104 Identities=16% Similarity=0.204 Sum_probs=62.3
Q ss_pred CcEEEEECCCCCchhhHHH--HHHHH-HHCCCEEEeeCC--------------CCCCCC---CCCCC---CCCCcHHH-H
Q 021382 27 AHVVVFLHGFPEIWYSWRH--QMVGV-ATAGFRAIAPDC--------------RGYGLS---DPPAE---PEKTSFQD-M 82 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~--~~~~l-~~~~~~vi~~D~--------------~G~G~S---~~~~~---~~~~~~~~-~ 82 (313)
-|++.++||..++..+|-. -++.. ...+.-++++|- .|-|.| +.... ...|.+.. +
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 4688888988776433321 12222 223566666522 233222 11100 01255555 3
Q ss_pred HHHHHHHHHHhCC-----CeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 83 VDDLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 83 ~~di~~~~~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
.+++-..+++-.. ++-.++||||||.=|+.+|+++|++++++...++.
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 4666644444322 26899999999999999999999999999976643
No 177
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.30 E-value=0.00083 Score=61.82 Aligned_cols=89 Identities=17% Similarity=0.236 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH----hCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 42 SWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH----LGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 42 ~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~----l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
.|..+++.|...||. --|+.|...--+........-+++-..+..+++. -+-+|++|+||||||.+++.+...-
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 678899999887775 3444443221100000001122333344444443 3568999999999999999876531
Q ss_pred ---------------ccccceeeEecCCCC
Q 021382 118 ---------------QERVSGVITLGVPIL 132 (313)
Q Consensus 118 ---------------p~~v~~lvl~~~~~~ 132 (313)
...|+++|.++++..
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccC
Confidence 135788888876654
No 178
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.19 E-value=0.0015 Score=59.63 Aligned_cols=93 Identities=14% Similarity=0.189 Sum_probs=56.1
Q ss_pred CcEEEEECCCC----Cchhh--HHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH--------H
Q 021382 27 AHVVVFLHGFP----EIWYS--WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD--------H 92 (313)
Q Consensus 27 ~~~ivllHG~~----~~~~~--w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~--------~ 92 (313)
.|.++++||.+ .+..+ |...+ .++.+--.+.++|++--- ..-++..-++-+..|.+ +
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~l-sl~gevvev~tfdl~n~i--------gG~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRL-SLKGEVVEVPTFDLNNPI--------GGANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHH-hhhceeeeeccccccCCC--------CCcchHHHHHHHHHHhhhhhhhhhcc
Confidence 57899999998 22222 33322 222233567778876321 11244444444444444 3
Q ss_pred hCCCeEEEEEeChhHHHHHHHHHhcc-cccceeeEec
Q 021382 93 LGLAKVFLVAKDFGALTAYMFAIQHQ-ERVSGVITLG 128 (313)
Q Consensus 93 l~~~~~~lvGhS~Gg~ia~~~a~~~p-~~v~~lvl~~ 128 (313)
+...+++|+|.|||+.++.......- ..|.++|+++
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCig 283 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIG 283 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEec
Confidence 34568999999999888877776543 3577788776
No 179
>PLN02209 serine carboxypeptidase
Probab=97.18 E-value=0.0047 Score=56.12 Aligned_cols=123 Identities=14% Similarity=0.143 Sum_probs=75.1
Q ss_pred eeeeeC---CEEEEEEecCC--C-CCCcEEEEECCCCCchhhHHHHHH---H-------------HH------HCCCEEE
Q 021382 7 KFIKVQ---GLNLHIAEAGA--D-ADAHVVVFLHGFPEIWYSWRHQMV---G-------------VA------TAGFRAI 58 (313)
Q Consensus 7 ~~~~~~---g~~i~~~~~g~--~-~~~~~ivllHG~~~~~~~w~~~~~---~-------------l~------~~~~~vi 58 (313)
-+++++ +..++|.-..+ + .+.|.|+++-|.|+++..+-.+.+ . +. .+..+++
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 356663 56677764332 1 246899999999999877643221 0 00 1236899
Q ss_pred eeC-CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh-------CCCeEEEEEeChhHHHHHHHHHh----c------ccc
Q 021382 59 APD-CRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQ----H------QER 120 (313)
Q Consensus 59 ~~D-~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~------p~~ 120 (313)
.+| ..|.|.|-........+-++.++|+.++++.+ .-.+++|.|.|+||.-+-.+|.. + +-.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 999 77999985332211122234556777766663 22479999999999866666542 2 124
Q ss_pred cceeeEecC
Q 021382 121 VSGVITLGV 129 (313)
Q Consensus 121 v~~lvl~~~ 129 (313)
++++++.++
T Consensus 202 l~Gi~igng 210 (437)
T PLN02209 202 LQGYVLGNP 210 (437)
T ss_pred eeeEEecCc
Confidence 567776554
No 180
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.18 E-value=0.00088 Score=42.96 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=22.9
Q ss_pred ccceeeee-CCEEEEEEecCCC-------CCCcEEEEECCCCCchhhHH
Q 021382 4 IEHKFIKV-QGLNLHIAEAGAD-------ADAHVVVFLHGFPEIWYSWR 44 (313)
Q Consensus 4 ~~~~~~~~-~g~~i~~~~~g~~-------~~~~~ivllHG~~~~~~~w~ 44 (313)
.+...+++ ||.-+........ +.+|||+|.||+.+|+..|-
T Consensus 12 ~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 12 CEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp -EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred cEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 44455555 8998887554321 24689999999999999993
No 181
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.17 E-value=0.0028 Score=57.49 Aligned_cols=123 Identities=11% Similarity=0.076 Sum_probs=74.2
Q ss_pred ceeeeeC---CEEEEEEecCC---CCCCcEEEEECCCCCchhhHHHHH---HH-------------HH------HCCCEE
Q 021382 6 HKFIKVQ---GLNLHIAEAGA---DADAHVVVFLHGFPEIWYSWRHQM---VG-------------VA------TAGFRA 57 (313)
Q Consensus 6 ~~~~~~~---g~~i~~~~~g~---~~~~~~ivllHG~~~~~~~w~~~~---~~-------------l~------~~~~~v 57 (313)
.-+++++ +..++|+-..+ ..+.|.|+++-|.|+++..+-.+. +. +. .+..++
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 118 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANI 118 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcE
Confidence 3466663 46777764332 124689999999999887542211 11 10 123789
Q ss_pred EeeC-CCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHh-------CCCeEEEEEeChhHHHHHHHHHh----c------c
Q 021382 58 IAPD-CRGYGLSDPPAEPEKTSF-QDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAIQ----H------Q 118 (313)
Q Consensus 58 i~~D-~~G~G~S~~~~~~~~~~~-~~~~~di~~~~~~l-------~~~~~~lvGhS~Gg~ia~~~a~~----~------p 118 (313)
+.+| ..|.|.|-.... ..++- .+.++++.++++.+ .-.+++|.|.|+||.-+..+|.. + +
T Consensus 119 lfiDqPvGtGfSy~~~~-~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~ 197 (433)
T PLN03016 119 IFLDQPVGSGFSYSKTP-IDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPP 197 (433)
T ss_pred EEecCCCCCCccCCCCC-CCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCc
Confidence 9999 789999954321 11211 13345666655553 33579999999999866666542 2 1
Q ss_pred cccceeeEecC
Q 021382 119 ERVSGVITLGV 129 (313)
Q Consensus 119 ~~v~~lvl~~~ 129 (313)
-.++++++-++
T Consensus 198 inLkGi~iGNg 208 (433)
T PLN03016 198 INLQGYMLGNP 208 (433)
T ss_pred ccceeeEecCC
Confidence 25677776553
No 182
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.15 E-value=0.0069 Score=53.25 Aligned_cols=117 Identities=15% Similarity=0.138 Sum_probs=72.9
Q ss_pred CCEEEEEEecCCC---CCCcEEEEECCCCCchhhHHHHHHHHHH-----CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHH
Q 021382 12 QGLNLHIAEAGAD---ADAHVVVFLHGFPEIWYSWRHQMVGVAT-----AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV 83 (313)
Q Consensus 12 ~g~~i~~~~~g~~---~~~~~ivllHG~~~~~~~w~~~~~~l~~-----~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (313)
+...++....+.. ++.|.||.+||++-.......++..|.+ ....+++.|.--.. |........+.+.+.+
T Consensus 104 d~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~-~~~~~~~yPtQL~qlv 182 (374)
T PF10340_consen 104 DSQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTS-SDEHGHKYPTQLRQLV 182 (374)
T ss_pred ccceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccc-cccCCCcCchHHHHHH
Confidence 3344565554321 2368999999997555444444443322 24688888865432 0000111234566777
Q ss_pred HHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHh--ccc---ccceeeEecC
Q 021382 84 DDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ--HQE---RVSGVITLGV 129 (313)
Q Consensus 84 ~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~--~p~---~v~~lvl~~~ 129 (313)
+-...+++..|.+.++|+|-|-||.+++.+.+. .+. .-+++|||++
T Consensus 183 ~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 183 ATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred HHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 777778878899999999999999999988753 211 2367787763
No 183
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.11 E-value=0.00055 Score=57.59 Aligned_cols=40 Identities=28% Similarity=0.332 Sum_probs=35.3
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCC
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGL 67 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~ 67 (313)
|.|||-||.+++...|...--.|+..||-|.|+.+|.+-.
T Consensus 119 PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA 158 (399)
T KOG3847|consen 119 PVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSA 158 (399)
T ss_pred cEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcc
Confidence 8999999999998888877788889999999999997643
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.11 E-value=0.0045 Score=51.12 Aligned_cols=96 Identities=20% Similarity=0.169 Sum_probs=63.9
Q ss_pred cEEEEECCCCCchhh--HHHHHHHHHH-CCCEEEeeCCCCCC--CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCeEEE
Q 021382 28 HVVVFLHGFPEIWYS--WRHQMVGVAT-AGFRAIAPDCRGYG--LSDPPAEPEKTSFQDMVDDLLAILDHLG--LAKVFL 100 (313)
Q Consensus 28 ~~ivllHG~~~~~~~--w~~~~~~l~~-~~~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~di~~~~~~l~--~~~~~l 100 (313)
.|+|++||++++..+ ...+.+.+.+ .|..|++.| .|-| .|. -.-+.++++.+.+-+.... -+-+++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~le-ig~g~~~s~------l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLE-IGDGIKDSS------LMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEE-ecCCcchhh------hccHHHHHHHHHHHHhcchhccCceEE
Confidence 479999999877655 5554454433 378899999 4666 322 1234455554444433221 135999
Q ss_pred EEeChhHHHHHHHHHhccc-ccceeeEecCC
Q 021382 101 VAKDFGALTAYMFAIQHQE-RVSGVITLGVP 130 (313)
Q Consensus 101 vGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~ 130 (313)
+|.|-||.++-.++..-|+ .|..+|.++.+
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999999999986553 68888877654
No 185
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.00 E-value=0.004 Score=56.11 Aligned_cols=90 Identities=20% Similarity=0.241 Sum_probs=63.3
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHH-------------------CCCEEEeeC-CCCCCCCCCCCCCCCCcHHHHHHH
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVAT-------------------AGFRAIAPD-CRGYGLSDPPAEPEKTSFQDMVDD 85 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~-------------------~~~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~d 85 (313)
++|.|+++.|.|+|+..|..+.+ +.. ..-.+|.+| ..|.|.|....+...-+.....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~e-lGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGE-LGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhh-cCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 47899999999999988875432 210 123699999 779999975333334455666666
Q ss_pred HHHHHHHh-------C--CCeEEEEEeChhHHHHHHHHHh
Q 021382 86 LLAILDHL-------G--LAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 86 i~~~~~~l-------~--~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
+..+.+.. . ..+.+|+|-|+||.=+..+|..
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~ 218 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHE 218 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHH
Confidence 66655543 2 3489999999999888888753
No 186
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.83 E-value=0.01 Score=47.31 Aligned_cols=103 Identities=13% Similarity=0.155 Sum_probs=61.2
Q ss_pred cEEEEECCCCC-chhhHHH---------------HHHHHHHCCCEEEeeCCCC---CCCCCCCCCCCCCcHHHHHHHH-H
Q 021382 28 HVVVFLHGFPE-IWYSWRH---------------QMVGVATAGFRAIAPDCRG---YGLSDPPAEPEKTSFQDMVDDL-L 87 (313)
Q Consensus 28 ~~ivllHG~~~-~~~~w~~---------------~~~~l~~~~~~vi~~D~~G---~G~S~~~~~~~~~~~~~~~~di-~ 87 (313)
.-+|||||.+- -+..|.+ .+.+..+.||-||....-- +-.+...+.....|..+-+.-+ .
T Consensus 102 kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~ 181 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWK 181 (297)
T ss_pred ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHH
Confidence 47999999863 2234432 2222234688888776331 1111111111111333333222 2
Q ss_pred HHHHHhCCCeEEEEEeChhHHHHHHHHHhccc--ccceeeEecCC
Q 021382 88 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVITLGVP 130 (313)
Q Consensus 88 ~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 130 (313)
.++....-+.+.+|.||+||...+.+..++|+ +|.++.+.+++
T Consensus 182 ~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 182 NIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 45555567789999999999999999999985 67777777655
No 187
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.79 E-value=0.0075 Score=50.19 Aligned_cols=47 Identities=6% Similarity=0.149 Sum_probs=36.8
Q ss_pred HHHHHHHHH-hC--CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 84 DDLLAILDH-LG--LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 84 ~di~~~~~~-l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+++.-++++ .. -++-.++|||+||.+++.....+|+.+....+++++
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 334445555 33 345899999999999999999999999999988754
No 188
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.76 E-value=0.0018 Score=51.50 Aligned_cols=102 Identities=21% Similarity=0.352 Sum_probs=64.5
Q ss_pred CcEEEEECCCCCchhhHHH--HH-HHHHHCCCEEEeeCC--CCC---CCCCC-C--C----------C--CCCCcHHHH-
Q 021382 27 AHVVVFLHGFPEIWYSWRH--QM-VGVATAGFRAIAPDC--RGY---GLSDP-P--A----------E--PEKTSFQDM- 82 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~--~~-~~l~~~~~~vi~~D~--~G~---G~S~~-~--~----------~--~~~~~~~~~- 82 (313)
-|++.+|-|.....++|-. -+ +...+.|+-||+||- ||. |.++. . . + ...|.+-++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 3688889999887766532 11 122345788999994 444 22210 0 0 0 012333333
Q ss_pred HHHHHHHHHH----hCCCeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 83 VDDLLAILDH----LGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 83 ~~di~~~~~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
..++.+++.. +...++.+.||||||.=|+..++++|++.+++-...
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFA 173 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFA 173 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccc
Confidence 3455555552 234479999999999999999999999998887544
No 189
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.74 E-value=0.0042 Score=51.50 Aligned_cols=24 Identities=17% Similarity=0.265 Sum_probs=20.8
Q ss_pred CCCeEEEEEeChhHHHHHHHHHhc
Q 021382 94 GLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 94 ~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
.-.++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 456899999999999999998764
No 190
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.60 E-value=0.023 Score=51.26 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=68.1
Q ss_pred CCEEEEEEecC-CCCCCcEEEEECCCC---Cchhh--HHHHHHHHHHCC-CEEEeeCCCC--CCC---CCCCC-C--CCC
Q 021382 12 QGLNLHIAEAG-ADADAHVVVFLHGFP---EIWYS--WRHQMVGVATAG-FRAIAPDCRG--YGL---SDPPA-E--PEK 76 (313)
Q Consensus 12 ~g~~i~~~~~g-~~~~~~~ivllHG~~---~~~~~--w~~~~~~l~~~~-~~vi~~D~~G--~G~---S~~~~-~--~~~ 76 (313)
|-+.++++.-. +..+.|++|+|||.. ++... ++. ..|++.| +=||++++|= +|. |+... + ...
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n 155 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN 155 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhcccccccccc
Confidence 45555554332 223469999999883 33222 333 4566666 7778777761 121 11110 0 012
Q ss_pred CcHHHHH---HHHHHHHHHhCCC--eEEEEEeChhHHHHHHHHHhcc---cccceeeEecC
Q 021382 77 TSFQDMV---DDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQHQ---ERVSGVITLGV 129 (313)
Q Consensus 77 ~~~~~~~---~di~~~~~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~ 129 (313)
..+.+++ +.+.+-|+.+|.+ .+.|+|+|-||+.++.+.+. | ..+.++|+.+.
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg 215 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSG 215 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCC
Confidence 3455543 5566778888876 59999999999998888764 4 35566665553
No 191
>PLN02162 triacylglycerol lipase
Probab=96.60 E-value=0.0061 Score=54.76 Aligned_cols=56 Identities=21% Similarity=0.339 Sum_probs=39.2
Q ss_pred CcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHh---c-----ccccceeeEecCCCC
Q 021382 77 TSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ---H-----QERVSGVITLGVPIL 132 (313)
Q Consensus 77 ~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~~~ 132 (313)
+.+.++.+.+.+++++..-.++++.|||+||.+|..+|+. + .+++.+++..|+|..
T Consensus 259 ~ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 259 YAYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred hhHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 3455666777777777766789999999999999998652 1 123455666676544
No 192
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.54 E-value=0.0033 Score=57.73 Aligned_cols=66 Identities=14% Similarity=0.321 Sum_probs=49.5
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhccc------------------------ccccCC-----CceEEEeCCCCCCcccc
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGK------------------------VKDFVP-----NLEIIRLSEGSHFVQEQ 296 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~p-----~~~~~~i~~~gH~~~~e 296 (313)
.+++|+..|+.|.+++..+.+.+..... ..+... +.+++.+.+|||+++.|
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 4899999999999887654433322111 112223 67888899999999999
Q ss_pred ChhHHHHHHHHHhhh
Q 021382 297 SPEEVNQLVLTFLNK 311 (313)
Q Consensus 297 ~pe~~~~~i~~fl~~ 311 (313)
+|++..+.|.+|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999999964
No 193
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.49 E-value=0.0087 Score=49.27 Aligned_cols=47 Identities=23% Similarity=0.260 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhc----ccccceeeEecCC
Q 021382 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQH----QERVSGVITLGVP 130 (313)
Q Consensus 83 ~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~ 130 (313)
++-+..+++..+- ++.+.|||.||.+|+..|+.- .+++.++...++|
T Consensus 72 ~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 72 LAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 3444555555544 599999999999999999874 3577787766644
No 194
>PLN00413 triacylglycerol lipase
Probab=96.40 E-value=0.011 Score=53.40 Aligned_cols=54 Identities=30% Similarity=0.511 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHh---c-----ccccceeeEecCCCC
Q 021382 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ---H-----QERVSGVITLGVPIL 132 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~---~-----p~~v~~lvl~~~~~~ 132 (313)
+.++.+.+.+++++..-.++++.|||+||.+|..+|+. + ..++.++...++|..
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 34566778888888777789999999999999998852 1 123445555665543
No 195
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.33 E-value=0.01 Score=46.71 Aligned_cols=51 Identities=27% Similarity=0.333 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHhC-----CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 80 QDMVDDLLAILDHLG-----LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 80 ~~~~~di~~~~~~l~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+.-+.+|..|++.|. -.+..++|||+|+.++-..+...+..+..+|++++|
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 455677777777763 236899999999999999888877889999998865
No 196
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.19 E-value=0.0086 Score=52.72 Aligned_cols=112 Identities=15% Similarity=0.193 Sum_probs=83.2
Q ss_pred EEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCC-CCCcHHHHHHHHHHHHHHh
Q 021382 15 NLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQDMVDDLLAILDHL 93 (313)
Q Consensus 15 ~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~di~~~~~~l 93 (313)
++...+.+. ++|+|+.--|...+..-.+.-.-.|+. -+-|.+.+|=||.|.+.+.+ ...|+.+-|.|.+++++.+
T Consensus 53 RvtLlHk~~--drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~ 128 (448)
T PF05576_consen 53 RVTLLHKDF--DRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAF 128 (448)
T ss_pred EEEEEEcCC--CCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHH
Confidence 344444443 478888888887764434321223333 47899999999999764433 3569999999999999998
Q ss_pred C---CCeEEEEEeChhHHHHHHHHHhcccccceeeEecCC
Q 021382 94 G---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 94 ~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
+ -+|++=-|-|-||+.++.+-.-||+-|.+.|..-+|
T Consensus 129 K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 129 KPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred HhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 4 358999999999999999999999999999975444
No 197
>PLN02571 triacylglycerol lipase
Probab=96.04 E-value=0.011 Score=52.66 Aligned_cols=37 Identities=11% Similarity=0.274 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhCCC--eEEEEEeChhHHHHHHHHHh
Q 021382 80 QDMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 80 ~~~~~di~~~~~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 116 (313)
+++..+|.++++...-+ ++++.||||||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45667777788776433 58999999999999999875
No 198
>PLN02454 triacylglycerol lipase
Probab=96.03 E-value=0.012 Score=52.29 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCCCe--EEEEEeChhHHHHHHHHHh
Q 021382 82 MVDDLLAILDHLGLAK--VFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 82 ~~~di~~~~~~l~~~~--~~lvGhS~Gg~ia~~~a~~ 116 (313)
+...|.+++++..-++ +++.||||||.+|...|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444555555554444 9999999999999999864
No 199
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.03 E-value=0.034 Score=52.17 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=59.2
Q ss_pred CcEEEEECCCC---Cch--hhHHHHHHHHHHCCCEEEeeCCC----CCCCCCCCCCC-CCCcHHHHH---HHHHHHHHHh
Q 021382 27 AHVVVFLHGFP---EIW--YSWRHQMVGVATAGFRAIAPDCR----GYGLSDPPAEP-EKTSFQDMV---DDLLAILDHL 93 (313)
Q Consensus 27 ~~~ivllHG~~---~~~--~~w~~~~~~l~~~~~~vi~~D~~----G~G~S~~~~~~-~~~~~~~~~---~di~~~~~~l 93 (313)
.|++|+|||.. ++. ..+.. ...+...+.=||.+..| ||-.+...... ..+.+.++. +.|.+-|..+
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 48999999874 333 23432 23344557888888777 33222211111 345666654 4444555566
Q ss_pred CCC--eEEEEEeChhHHHHHHHHHhc--ccccceeeEecC
Q 021382 94 GLA--KVFLVAKDFGALTAYMFAIQH--QERVSGVITLGV 129 (313)
Q Consensus 94 ~~~--~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~ 129 (313)
|.+ ++.|+|||-||..+..+...- ...+.++|+.+.
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred ccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 755 699999999999888887652 257888888765
No 200
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.85 E-value=0.013 Score=51.53 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=53.6
Q ss_pred CcEEEEECCCCC-chhhHHHHHHHHHHCCCEEEeeCCCCCCCC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeC
Q 021382 27 AHVVVFLHGFPE-IWYSWRHQMVGVATAGFRAIAPDCRGYGLS-DPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD 104 (313)
Q Consensus 27 ~~~ivllHG~~~-~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS 104 (313)
+.-+||.||+-+ +...|...+..... .+.=..+..+|+=+. ....++..+==.++++++.+.+....++++.+||||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~k-k~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTK-KMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhc-CCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 457999999977 67778777765543 233324444555322 222221111112466677777777778999999999
Q ss_pred hhHHHHHHH
Q 021382 105 FGALTAYMF 113 (313)
Q Consensus 105 ~Gg~ia~~~ 113 (313)
.||.++...
T Consensus 159 LGGLvar~A 167 (405)
T KOG4372|consen 159 LGGLVARYA 167 (405)
T ss_pred cCCeeeeEE
Confidence 999776443
No 201
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.83 E-value=0.034 Score=44.13 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHh------cccccceeeEecCC
Q 021382 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ------HQERVSGVITLGVP 130 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~~~ 130 (313)
...+.+.|.+...+..-.|++|+|+|.|+.|+...+.. ..++|.++++++-|
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP 121 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDP 121 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-T
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCC
Confidence 44555566666666666799999999999999999876 45789999998754
No 202
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.83 E-value=0.067 Score=48.61 Aligned_cols=108 Identities=15% Similarity=0.130 Sum_probs=69.4
Q ss_pred eeeeeC---CEEEEEEecCC--C-CCCcEEEEECCCCCchhhHHHHHHHHHH------------------CCCEEEeeCC
Q 021382 7 KFIKVQ---GLNLHIAEAGA--D-ADAHVVVFLHGFPEIWYSWRHQMVGVAT------------------AGFRAIAPDC 62 (313)
Q Consensus 7 ~~~~~~---g~~i~~~~~g~--~-~~~~~ivllHG~~~~~~~w~~~~~~l~~------------------~~~~vi~~D~ 62 (313)
-+++++ +..++|+-..+ + ...|.||.|.|+|+|+..- ..+.++.. +.-+++.+|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 467775 78898864432 2 2478999999999998543 33333210 1247888998
Q ss_pred C-CCCCCCCCCC-CCCCcHHHHHHHHHHHHHHh-------CCCeEEEEEeChhHHHHHHHHH
Q 021382 63 R-GYGLSDPPAE-PEKTSFQDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 63 ~-G~G~S~~~~~-~~~~~~~~~~~di~~~~~~l-------~~~~~~lvGhS~Gg~ia~~~a~ 115 (313)
| |-|.|-.... ....+-+..|.|+.+|+.+. .-.+++|.|-|++|...-.+|.
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 7 7888753321 11124445667777666654 3457999999999966666654
No 203
>PLN02408 phospholipase A1
Probab=95.76 E-value=0.018 Score=50.61 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhCCC--eEEEEEeChhHHHHHHHHHhc
Q 021382 81 DMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 81 ~~~~di~~~~~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
+..++|.+++++.+-+ ++++.|||+||.+|...|..-
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3456677777776543 599999999999999998753
No 204
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.74 E-value=0.008 Score=54.51 Aligned_cols=65 Identities=25% Similarity=0.407 Sum_probs=44.1
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhc------------c--------cccccCCCceEEEeCCCCCCccccChhHHHHHH
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRS------------G--------KVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLV 305 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~------------~--------~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i 305 (313)
.+++|+..|..|.+++..+.+.+... . -..+...+.+++.|.+|||+++.++|++..+.|
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 48999999999999864333222111 0 011233568889999999999999999999999
Q ss_pred HHHhh
Q 021382 306 LTFLN 310 (313)
Q Consensus 306 ~~fl~ 310 (313)
.+||.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99986
No 205
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.65 E-value=0.048 Score=47.91 Aligned_cols=84 Identities=19% Similarity=0.200 Sum_probs=59.2
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCCeEEEEEeC
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVFLVAKD 104 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l----~~~~~~lvGhS 104 (313)
.-||+-|=++....=..+...|.+.|+.||-+|=.=|=+|.+ |.++.++|+..+++.. +.+++.|+|.|
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r-------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER-------TPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC-------CHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 344555544432222346677778899999999887877753 5668889998888876 56789999999
Q ss_pred hhHHHHHHHHHhccc
Q 021382 105 FGALTAYMFAIQHQE 119 (313)
Q Consensus 105 ~Gg~ia~~~a~~~p~ 119 (313)
+|+=|--....+-|.
T Consensus 335 fGADvlP~~~n~L~~ 349 (456)
T COG3946 335 FGADVLPFAYNRLPP 349 (456)
T ss_pred ccchhhHHHHHhCCH
Confidence 999776655444443
No 206
>PLN02310 triacylglycerol lipase
Probab=95.58 E-value=0.036 Score=49.33 Aligned_cols=37 Identities=8% Similarity=0.242 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhC----CCeEEEEEeChhHHHHHHHHHh
Q 021382 80 QDMVDDLLAILDHLG----LAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 80 ~~~~~di~~~~~~l~----~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
+++.++|.++++... -.++++.|||+||.+|...|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 345567777777663 1379999999999999998854
No 207
>PLN02934 triacylglycerol lipase
Probab=95.51 E-value=0.026 Score=51.37 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHH
Q 021382 79 FQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~ 115 (313)
+.++.+.+.+++++..-.++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 4456777888888877779999999999999999985
No 208
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.43 E-value=0.044 Score=45.22 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=57.1
Q ss_pred EEEEECCCCCc---hhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC----eEEEE
Q 021382 29 VVVFLHGFPEI---WYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA----KVFLV 101 (313)
Q Consensus 29 ~ivllHG~~~~---~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~----~~~lv 101 (313)
.|-||=|..-. .-+|+.+.+.|.++||-|||.=.. .|.- .-. -..--+..+-..+..+.+.-++. +++-|
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~-~tfD-H~~-~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~v 95 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV-VTFD-HQA-IAREVWERFERCLRALQKRGGLDPAYLPVYGV 95 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC-CCCc-HHH-HHHHHHHHHHHHHHHHHHhcCCCcccCCeeee
Confidence 55555555322 235788899999999999997653 1110 000 00001112222222233222322 56789
Q ss_pred EeChhHHHHHHHHHhcccccceeeEec
Q 021382 102 AKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 102 GhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
|||||+-+-+.+...++...++.++++
T Consensus 96 GHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 96 GHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred ecccchHHHHHHhhhccCcccceEEEe
Confidence 999999999999988876667778775
No 209
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.35 E-value=0.13 Score=41.61 Aligned_cols=98 Identities=19% Similarity=0.285 Sum_probs=65.8
Q ss_pred CcEEEEECCCCCchhh--H-HHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC----eEE
Q 021382 27 AHVVVFLHGFPEIWYS--W-RHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLA----KVF 99 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~--w-~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~----~~~ 99 (313)
+.-|||+-|.+..-.. + ..+...|.+.++.+|-+-++-+ . ......++.+=++|+..+++.++.. +++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss----y-~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS----Y-NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc----c-cccccccccccHHHHHHHHHHhhccCcccceE
Confidence 3568999888765332 2 2344566667899998887632 1 1112345666688999999977543 799
Q ss_pred EEEeChhHHHHHHHHH--hcccccceeeEecC
Q 021382 100 LVAKDFGALTAYMFAI--QHQERVSGVITLGV 129 (313)
Q Consensus 100 lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~ 129 (313)
|+|||-|+-=.+.|.. .-|..+.+.|+.++
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqAp 142 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAP 142 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCc
Confidence 9999999998888873 23556666666543
No 210
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.26 E-value=0.045 Score=47.90 Aligned_cols=39 Identities=31% Similarity=0.491 Sum_probs=30.3
Q ss_pred CCCeEEEEEeChhHHHHHHHHHhccc-----ccceeeEecCCCC
Q 021382 94 GLAKVFLVAKDFGALTAYMFAIQHQE-----RVSGVITLGVPIL 132 (313)
Q Consensus 94 ~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 132 (313)
|-.++.|||||+|+.+...+...-++ .|+.++++++|..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 55579999999999999888754333 4788899987643
No 211
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.25 E-value=0.066 Score=46.78 Aligned_cols=65 Identities=17% Similarity=0.306 Sum_probs=47.5
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhccc------------------ccccCC-CceEEEeCCCCCCccccChhHHHHHHH
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGK------------------VKDFVP-NLEIIRLSEGSHFVQEQSPEEVNQLVL 306 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------~~~~~p-~~~~~~i~~~gH~~~~e~pe~~~~~i~ 306 (313)
.+++|+..|+.|.+++..+.+.+..... ..+... +.++..+-+|||+++ .+|++..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4899999999998887655433322111 112222 388888999999997 59999999999
Q ss_pred HHhhh
Q 021382 307 TFLNK 311 (313)
Q Consensus 307 ~fl~~ 311 (313)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99964
No 212
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.24 E-value=0.045 Score=47.83 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=40.2
Q ss_pred CEEEeeCCC-CCCCCCCCCCCCCCcH-HHHHHHHHHHHHHh-------CCCeEEEEEeChhHHHHHHHHH
Q 021382 55 FRAIAPDCR-GYGLSDPPAEPEKTSF-QDMVDDLLAILDHL-------GLAKVFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 55 ~~vi~~D~~-G~G~S~~~~~~~~~~~-~~~~~di~~~~~~l-------~~~~~~lvGhS~Gg~ia~~~a~ 115 (313)
.+++.+|+| |.|.|-...+ ..++- ...|+|+..+++.+ .-.+++|.|-|+||.-+-.+|.
T Consensus 2 aNvLfiDqPvGvGfSy~~~~-~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~ 70 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTP-IDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 70 (319)
T ss_pred ccEEEecCCCCCCCCCCCCC-CCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHH
Confidence 378999999 9999953322 22222 23446666666553 3357999999999987766665
No 213
>PLN02324 triacylglycerol lipase
Probab=95.22 E-value=0.035 Score=49.50 Aligned_cols=36 Identities=14% Similarity=0.260 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhCCC--eEEEEEeChhHHHHHHHHHh
Q 021382 81 DMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 81 ~~~~di~~~~~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 116 (313)
++.++|.++++...-+ ++++.|||+||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3456677788776532 69999999999999999864
No 214
>PLN02802 triacylglycerol lipase
Probab=95.11 E-value=0.039 Score=50.26 Aligned_cols=37 Identities=14% Similarity=0.248 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhCCC--eEEEEEeChhHHHHHHHHHhc
Q 021382 81 DMVDDLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 81 ~~~~di~~~~~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
++.++|.++++...-+ ++++.|||+||.+|...|..-
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3456677777766432 689999999999999988753
No 215
>PLN02753 triacylglycerol lipase
Probab=94.93 E-value=0.047 Score=49.94 Aligned_cols=36 Identities=11% Similarity=0.275 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhCC-----CeEEEEEeChhHHHHHHHHHh
Q 021382 81 DMVDDLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 81 ~~~~di~~~~~~l~~-----~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
++...|.+++++.+. .++++.|||+||.+|...|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344566667766542 379999999999999999864
No 216
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.76 E-value=0.054 Score=49.51 Aligned_cols=36 Identities=8% Similarity=0.277 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhC----CCeEEEEEeChhHHHHHHHHHh
Q 021382 81 DMVDDLLAILDHLG----LAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 81 ~~~~di~~~~~~l~----~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
+..++|..+++... -.++++.|||+||.+|...|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 45567777777663 1269999999999999998854
No 217
>PLN02209 serine carboxypeptidase
Probab=94.67 E-value=0.066 Score=48.79 Aligned_cols=65 Identities=18% Similarity=0.347 Sum_probs=48.7
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhccc------------------ccccCCC-ceEEEeCCCCCCccccChhHHHHHHH
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGK------------------VKDFVPN-LEIIRLSEGSHFVQEQSPEEVNQLVL 306 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------~~~~~p~-~~~~~i~~~gH~~~~e~pe~~~~~i~ 306 (313)
.+++|+..|+.|.+++..+.+.+..... ..+...+ .+++.|-+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4799999999999997655544332211 1123344 88889999999996 59999999999
Q ss_pred HHhhh
Q 021382 307 TFLNK 311 (313)
Q Consensus 307 ~fl~~ 311 (313)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 218
>PLN02719 triacylglycerol lipase
Probab=94.54 E-value=0.067 Score=48.83 Aligned_cols=36 Identities=11% Similarity=0.282 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCC-----CeEEEEEeChhHHHHHHHHHh
Q 021382 81 DMVDDLLAILDHLGL-----AKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 81 ~~~~di~~~~~~l~~-----~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
++..+|.++++...- .++++.|||+||.+|...|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344566666666532 279999999999999998864
No 219
>PLN02761 lipase class 3 family protein
Probab=94.44 E-value=0.072 Score=48.75 Aligned_cols=36 Identities=14% Similarity=0.285 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhC-----C-CeEEEEEeChhHHHHHHHHHh
Q 021382 81 DMVDDLLAILDHLG-----L-AKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 81 ~~~~di~~~~~~l~-----~-~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
++...|..+++..+ - -++++.|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 45566677777652 1 269999999999999998853
No 220
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.41 E-value=0.1 Score=47.61 Aligned_cols=65 Identities=17% Similarity=0.306 Sum_probs=48.1
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhccc------------------ccccCC-CceEEEeCCCCCCccccChhHHHHHHH
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGK------------------VKDFVP-NLEIIRLSEGSHFVQEQSPEEVNQLVL 306 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------~~~~~p-~~~~~~i~~~gH~~~~e~pe~~~~~i~ 306 (313)
.+++|+..|+.|.+++..+.+.+..... ..+... +.+++.|-+|||+++ .+|++....+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4899999999999997655443332111 112223 478889999999997 59999999999
Q ss_pred HHhhh
Q 021382 307 TFLNK 311 (313)
Q Consensus 307 ~fl~~ 311 (313)
+|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99964
No 221
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=94.31 E-value=0.25 Score=40.17 Aligned_cols=76 Identities=20% Similarity=0.318 Sum_probs=50.5
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCE-EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCh
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFR-AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF 105 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~ 105 (313)
...|||..||+.+...+.++. ...++. ++++|.|-.-. +. |+ -+.++++|||+||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~--------d~-------~~------~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDF--------DF-------DL------SGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCccccc--------cc-------cc------ccCceEEEEEEeH
Confidence 358999999999877666532 123455 67788774321 00 11 2467999999999
Q ss_pred hHHHHHHHHHhcccccceeeEec
Q 021382 106 GALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 106 Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
|=.+|.++....| ++.-|.++
T Consensus 67 GVw~A~~~l~~~~--~~~aiAIN 87 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAIN 87 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEE
Confidence 9999999866554 45555554
No 222
>PLN02847 triacylglycerol lipase
Probab=93.80 E-value=0.12 Score=47.96 Aligned_cols=21 Identities=24% Similarity=0.298 Sum_probs=18.7
Q ss_pred CeEEEEEeChhHHHHHHHHHh
Q 021382 96 AKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 96 ~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
=+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 479999999999999999864
No 223
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=93.59 E-value=0.27 Score=42.05 Aligned_cols=97 Identities=15% Similarity=0.230 Sum_probs=66.3
Q ss_pred CCcEEEEECCCCCchhh----HHHHHHHHHH---------CCCEEEeeCCC-CCCCCCCCCC-CCCCcHHHHHHHHHHHH
Q 021382 26 DAHVVVFLHGFPEIWYS----WRHQMVGVAT---------AGFRAIAPDCR-GYGLSDPPAE-PEKTSFQDMVDDLLAIL 90 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~----w~~~~~~l~~---------~~~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~di~~~~ 90 (313)
..|-.+.+.|.|+.+.+ |+.+-+.-+. +.-.++.+|.| |.|.|-.... ...-+..+.+.|+.+++
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ll 109 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELL 109 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHH
Confidence 36778999999876543 4443221110 12578888876 7888854321 12235678999999999
Q ss_pred HHh-------CCCeEEEEEeChhHHHHHHHHHhcccccc
Q 021382 91 DHL-------GLAKVFLVAKDFGALTAYMFAIQHQERVS 122 (313)
Q Consensus 91 ~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 122 (313)
+.+ +-.+++|+.-|+||-+|..++..--+.|+
T Consensus 110 k~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk 148 (414)
T KOG1283|consen 110 KGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIK 148 (414)
T ss_pred HHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence 986 33479999999999999999876555444
No 224
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.36 E-value=0.15 Score=44.85 Aligned_cols=37 Identities=11% Similarity=0.248 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHh
Q 021382 80 QDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 80 ~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
.++.+++..+++...-=++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5778888888888886689999999999999998864
No 225
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.16 E-value=0.16 Score=46.15 Aligned_cols=65 Identities=26% Similarity=0.444 Sum_probs=47.8
Q ss_pred CcEEEEeeCCCcCCCCCCchhhhhc----------------cccc---ccCCCceEEEeCCCCCCccccChhHHHHHHHH
Q 021382 247 VPALLILGEKDYFLKFPGIEDYIRS----------------GKVK---DFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLT 307 (313)
Q Consensus 247 ~P~l~i~G~~D~~~~~~~~~~~~~~----------------~~~~---~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~ 307 (313)
.+++|..|+.|.++|.-+.+.+..+ .+.+ +...+..+..+-||||+++.++|+..-..+.+
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999976544332111 0110 12234666888999999999999999999999
Q ss_pred Hhhh
Q 021382 308 FLNK 311 (313)
Q Consensus 308 fl~~ 311 (313)
|+..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9975
No 226
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=93.09 E-value=1.3 Score=41.28 Aligned_cols=115 Identities=18% Similarity=0.179 Sum_probs=76.7
Q ss_pred CCEEEEEEecC--CCC-CCcEEEEECCCCCchh--hHHHHHHHHHHCCCEEEeeCCCCCCCCCCC--CCCCCCcHHHHHH
Q 021382 12 QGLNLHIAEAG--ADA-DAHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPP--AEPEKTSFQDMVD 84 (313)
Q Consensus 12 ~g~~i~~~~~g--~~~-~~~~ivllHG~~~~~~--~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~~~ 84 (313)
||++|.|-+.+ .+. +.|++|.-=|...-+. .|..++...+++|--.+.-..||=|.=.+. .....-.-+...|
T Consensus 403 DGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfd 482 (648)
T COG1505 403 DGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFD 482 (648)
T ss_pred CCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhH
Confidence 99999997764 112 3677776665543332 366666666778888888899997753221 1111112223445
Q ss_pred HHHHHHHHh---CC---CeEEEEEeChhHHHHHHHHHhcccccceeeE
Q 021382 85 DLLAILDHL---GL---AKVFLVAKDFGALTAYMFAIQHQERVSGVIT 126 (313)
Q Consensus 85 di~~~~~~l---~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 126 (313)
|..++.+.| || +++.+-|-|=||.+......++||.+-++|+
T Consensus 483 Df~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 483 DFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred HHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceee
Confidence 555555554 44 4789999999999999999999999988885
No 227
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=92.45 E-value=0.29 Score=43.56 Aligned_cols=30 Identities=20% Similarity=0.183 Sum_probs=28.1
Q ss_pred eEEEEEeChhHHHHHHHHHhcccccceeeE
Q 021382 97 KVFLVAKDFGALTAYMFAIQHQERVSGVIT 126 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 126 (313)
+.+++|+|.||.+|...|.-.|..+.+++=
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iD 214 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVID 214 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEe
Confidence 899999999999999999999999998884
No 228
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=92.40 E-value=0.36 Score=39.00 Aligned_cols=64 Identities=13% Similarity=0.096 Sum_probs=40.8
Q ss_pred CCEEEeeCCCCCCCCCCC----CCC---CCCcHHHHHHHHHHHHHHhC-CCeEEEEEeChhHHHHHHHHHhc
Q 021382 54 GFRAIAPDCRGYGLSDPP----AEP---EKTSFQDMVDDLLAILDHLG-LAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 54 ~~~vi~~D~~G~G~S~~~----~~~---~~~~~~~~~~di~~~~~~l~-~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
-.+|++|=.|=....... .+. ...-+.+..+-...+|+..+ ..+++|+|||-|+++..++...+
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 468999887755433222 110 11233344444455666664 45899999999999999998765
No 229
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=92.07 E-value=0.87 Score=45.93 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=62.8
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC-CeEEEEEeC
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL-AKVFLVAKD 104 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~-~~~~lvGhS 104 (313)
.+||+.|+|-.-+....++. |++ +. ..|-||.-... .-...+++..|.-.+.-|+++.- .+..++|.|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~----la~-rl-----e~PaYglQ~T~-~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALES----LAS-RL-----EIPAYGLQCTE-AVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred cCCceEEEeccccchHHHHH----HHh-hc-----CCcchhhhccc-cCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 47899999988776554544 433 22 34667754321 12345788888888777777753 479999999
Q ss_pred hhHHHHHHHHHh--cccccceeeEecC
Q 021382 105 FGALTAYMFAIQ--HQERVSGVITLGV 129 (313)
Q Consensus 105 ~Gg~ia~~~a~~--~p~~v~~lvl~~~ 129 (313)
+|+.++..+|.. ..+....+++.+.
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 999999999853 2344555777764
No 230
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=91.99 E-value=0.3 Score=41.47 Aligned_cols=65 Identities=22% Similarity=0.379 Sum_probs=44.3
Q ss_pred ccC-CcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccChh---HHHHHHHHHhhhc
Q 021382 244 TVK-VPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPE---EVNQLVLTFLNKH 312 (313)
Q Consensus 244 ~i~-~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe---~~~~~i~~fl~~~ 312 (313)
.+. +|+|+++|..|..+|.....+.+.. .+.. ..+...+++++|......+. +....+.+|+.+.
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~~---~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYEA---ARER-PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHhh---hccC-CceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 344 7999999999999987655443321 1111 45677888899988865443 5667888888653
No 231
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=91.26 E-value=0.17 Score=43.00 Aligned_cols=100 Identities=16% Similarity=0.150 Sum_probs=59.1
Q ss_pred CCcEEEEECCCC--CchhhHHHHHHHHHHCC----CEEEeeCCCCCCCCCCCCC---CCCCcHHHHHHHHHHHHHHh-C-
Q 021382 26 DAHVVVFLHGFP--EIWYSWRHQMVGVATAG----FRAIAPDCRGYGLSDPPAE---PEKTSFQDMVDDLLAILDHL-G- 94 (313)
Q Consensus 26 ~~~~ivllHG~~--~~~~~w~~~~~~l~~~~----~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~di~~~~~~l-~- 94 (313)
.-|.+++.||-. .+...|+ +++.|...+ --+|.+|. ........ ...-....++++|.=++++- .
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~---~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~ 172 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDY---IDVKKRREELHCNEAYWRFLAQELLPYVEERYPT 172 (299)
T ss_pred cccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCC---CCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcc
Confidence 357899999853 3333454 455555433 34555553 33221111 01113344455554444442 1
Q ss_pred ---CCeEEEEEeChhHHHHHHHHHhcccccceeeEecC
Q 021382 95 ---LAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 95 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
-+.=+|.|-|+||.+|+..+.+||+++-.++..++
T Consensus 173 ~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sp 210 (299)
T COG2382 173 SADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSG 210 (299)
T ss_pred cccCCCcEEeccccccHHHHHHHhcCchhhceeeccCC
Confidence 12468999999999999999999999988876553
No 232
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=90.71 E-value=1.1 Score=42.44 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=54.4
Q ss_pred CcEEEEECCCC---CchhhHHHHHH-HHHH-CCCEEEeeCCC----CCCCCCCCCCCCCCcHHHHHHHHH---HHHHHhC
Q 021382 27 AHVVVFLHGFP---EIWYSWRHQMV-GVAT-AGFRAIAPDCR----GYGLSDPPAEPEKTSFQDMVDDLL---AILDHLG 94 (313)
Q Consensus 27 ~~~ivllHG~~---~~~~~w~~~~~-~l~~-~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~di~---~~~~~l~ 94 (313)
-|++|++||.+ ++..++..... .++. +..=||.+-.| |+.-+.....+..+.+.++..-+. +-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 58999999985 33223321111 1111 12334444433 332222111124566665554443 4444555
Q ss_pred --CCeEEEEEeChhHHHHHHHHHhc--ccccceeeEec
Q 021382 95 --LAKVFLVAKDFGALTAYMFAIQH--QERVSGVITLG 128 (313)
Q Consensus 95 --~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~ 128 (313)
.+++.|+|||-||..+..++..- ...+.+.|..+
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~S 229 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMS 229 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhc
Confidence 45799999999999998887631 24555555544
No 233
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=89.92 E-value=5.3 Score=28.23 Aligned_cols=82 Identities=17% Similarity=0.093 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHCCCEEEeeCCCCCCCCCCC--CCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhH--HHHHHHHHhc
Q 021382 42 SWRHQMVGVATAGFRAIAPDCRGYGLSDPP--AEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA--LTAYMFAIQH 117 (313)
Q Consensus 42 ~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg--~ia~~~a~~~ 117 (313)
.|..+...+...+|-.-.+.++.+|.+-.. ..... +.=.+.|.++++.+.-.++++||=|--. -+-..+|.+|
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~---~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAE---EHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCch---hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 454444555455677777888888765322 11111 2234568888899988899999977544 4445567889
Q ss_pred ccccceeeE
Q 021382 118 QERVSGVIT 126 (313)
Q Consensus 118 p~~v~~lvl 126 (313)
|++|.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 999998864
No 234
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=88.61 E-value=1.9 Score=40.82 Aligned_cols=102 Identities=16% Similarity=0.207 Sum_probs=67.2
Q ss_pred CcEEEEECCCCCchh--hHHHHHHHHHHCCCEEEeeCCCCCCCCCCC--CC----CCCCcHHHHHHHHHHHHHHh--CCC
Q 021382 27 AHVVVFLHGFPEIWY--SWRHQMVGVATAGFRAIAPDCRGYGLSDPP--AE----PEKTSFQDMVDDLLAILDHL--GLA 96 (313)
Q Consensus 27 ~~~ivllHG~~~~~~--~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~--~~----~~~~~~~~~~~di~~~~~~l--~~~ 96 (313)
+|.+|..=|--+.+. .|......|+.+|+-.-.-=-||=|.=... .+ ....|+.++++....++++= .-+
T Consensus 448 ~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~ 527 (682)
T COG1770 448 APLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPD 527 (682)
T ss_pred CcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCcc
Confidence 566666666544332 355555566677754333334664432111 11 12568889988887777663 234
Q ss_pred eEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 97 KVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
.++++|-|-||++....+...|+.++++|+--
T Consensus 528 ~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~V 559 (682)
T COG1770 528 RIVAIGGSAGGMLMGAVANMAPDLFAGIIAQV 559 (682)
T ss_pred ceEEeccCchhHHHHHHHhhChhhhhheeecC
Confidence 69999999999999999999999999999643
No 235
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.33 E-value=0.89 Score=42.27 Aligned_cols=51 Identities=22% Similarity=0.487 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHh---CCC---eEEEEEeChhHHHHHHHHHh-----ccc------ccceeeEecCC
Q 021382 80 QDMVDDLLAILDHL---GLA---KVFLVAKDFGALTAYMFAIQ-----HQE------RVSGVITLGVP 130 (313)
Q Consensus 80 ~~~~~di~~~~~~l---~~~---~~~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~ 130 (313)
..++.-..++++++ ++. +++.+||||||.++=.+... .|+ ...++++++.|
T Consensus 504 ~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 504 RSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 34444444455544 443 69999999999888776643 232 45667766654
No 236
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=87.66 E-value=0.56 Score=43.93 Aligned_cols=101 Identities=16% Similarity=0.152 Sum_probs=68.2
Q ss_pred CcEEEEECCCCC-ch-hhHHHHHHHHHHCCCEEEeeCCCCCCCCC--CCCCC----CCCcHHHHHHHHHHHHHHh--CCC
Q 021382 27 AHVVVFLHGFPE-IW-YSWRHQMVGVATAGFRAIAPDCRGYGLSD--PPAEP----EKTSFQDMVDDLLAILDHL--GLA 96 (313)
Q Consensus 27 ~~~ivllHG~~~-~~-~~w~~~~~~l~~~~~~vi~~D~~G~G~S~--~~~~~----~~~~~~~~~~di~~~~~~l--~~~ 96 (313)
.|.+|..+|..+ +. -.|..--..|...|.-+...|.||=|.=. +..++ ...+++++.....-+++.- .-+
T Consensus 470 ~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~ 549 (712)
T KOG2237|consen 470 KPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPS 549 (712)
T ss_pred CceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCcc
Confidence 566666666543 22 23654333445567777777899876432 12221 2457777777766666642 345
Q ss_pred eEEEEEeChhHHHHHHHHHhcccccceeeEe
Q 021382 97 KVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 127 (313)
+..+.|.|-||.++..+...+||.+.++|+-
T Consensus 550 kL~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 550 KLAIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred ceeEecccCccchhHHHhccCchHhhhhhhc
Confidence 7999999999999999999999999998863
No 237
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=87.04 E-value=7.1 Score=32.22 Aligned_cols=54 Identities=19% Similarity=0.155 Sum_probs=34.4
Q ss_pred cHHHHHHHHHHHHHH-h-CCCeEEEEEeChhHHHHHHHHHhccc------ccceeeEecCCC
Q 021382 78 SFQDMVDDLLAILDH-L-GLAKVFLVAKDFGALTAYMFAIQHQE------RVSGVITLGVPI 131 (313)
Q Consensus 78 ~~~~~~~di~~~~~~-l-~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~ 131 (313)
++.+=++.+.+.++. . .-++++++|+|.|+.++...+.+.-. ....+|+++-+.
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCC
Confidence 444444555555544 1 23689999999999999988764321 244677776443
No 238
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=85.71 E-value=5.4 Score=34.13 Aligned_cols=77 Identities=18% Similarity=0.335 Sum_probs=43.2
Q ss_pred CcEEEEEC--CCCCch--------------hhHHHHHHHHHHCCCE--EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 021382 27 AHVVVFLH--GFPEIW--------------YSWRHQMVGVATAGFR--AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 88 (313)
Q Consensus 27 ~~~ivllH--G~~~~~--------------~~w~~~~~~l~~~~~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~ 88 (313)
+.++|++| |-|.+. ..+...+..+.+.|.. =|.+| ||+|.+.... .+ -++...+..
T Consensus 133 ~~~vVlmh~~g~p~~~~~~~~y~dv~~~v~~~l~~~i~~a~~~GI~~~~IilD-PGiGF~k~~~----~n-~~ll~~l~~ 206 (282)
T PRK11613 133 GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEAAGIAKEKLLLD-PGFGFGKNLS----HN-YQLLARLAE 206 (282)
T ss_pred CCCEEEEcCCCCCCccccCCCcccHHHHHHHHHHHHHHHHHHcCCChhhEEEe-CCCCcCCCHH----HH-HHHHHHHHH
Confidence 45788888 444432 1233445555566765 78889 5888764221 01 122333333
Q ss_pred HHHHhCCCeEEEEEeChhHHHHHH
Q 021382 89 ILDHLGLAKVFLVAKDFGALTAYM 112 (313)
Q Consensus 89 ~~~~l~~~~~~lvGhS~Gg~ia~~ 112 (313)
| ..+ ...+++|+|-=+++...
T Consensus 207 l-~~l--g~Pilvg~SRKsfig~~ 227 (282)
T PRK11613 207 F-HHF--NLPLLVGMSRKSMIGQL 227 (282)
T ss_pred H-HhC--CCCEEEEecccHHHHhh
Confidence 3 333 45899999977766543
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=83.18 E-value=2 Score=36.25 Aligned_cols=31 Identities=19% Similarity=0.325 Sum_probs=24.0
Q ss_pred HHHHHhCCCeEEEEEeChhHHHHHHHHHhcc
Q 021382 88 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (313)
Q Consensus 88 ~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 118 (313)
.+.+...-.++.|-|||+||.+|..+..++-
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 3444344457999999999999999998873
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=83.18 E-value=2 Score=36.25 Aligned_cols=31 Identities=19% Similarity=0.325 Sum_probs=24.0
Q ss_pred HHHHHhCCCeEEEEEeChhHHHHHHHHHhcc
Q 021382 88 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (313)
Q Consensus 88 ~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 118 (313)
.+.+...-.++.|-|||+||.+|..+..++-
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 3444344457999999999999999998873
No 241
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=83.06 E-value=6.8 Score=34.53 Aligned_cols=58 Identities=16% Similarity=0.227 Sum_probs=40.3
Q ss_pred ccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCc-eEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 244 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNL-EIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 244 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~-~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
++.+|-.+|.|..|.++.++... ..-+.+|+. -+..+|+..|..- ++.+.+.+..|+.
T Consensus 327 RLalpKyivnaSgDdff~pDsa~------lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~fln 385 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSAN------LYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLN 385 (507)
T ss_pred hccccceeecccCCcccCCCccc------eeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHH
Confidence 67899999999999888766543 233567774 5678999888643 4455566666654
No 242
>PRK10279 hypothetical protein; Provisional
Probab=80.34 E-value=1.5 Score=37.87 Aligned_cols=37 Identities=14% Similarity=0.309 Sum_probs=29.8
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccc
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVS 122 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 122 (313)
+.+.+++.|+..-.++|.|+|+.++..||....+.+.
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l~ 59 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALE 59 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHHH
Confidence 4556667899889999999999999999987654443
No 243
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.32 E-value=1 Score=35.02 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=34.2
Q ss_pred HHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeEecCCC
Q 021382 89 ILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLGVPI 131 (313)
Q Consensus 89 ~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (313)
++++.=...-.+-|-||||.-|..+..++|+...++|..+..+
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 3444323457889999999999999999999999999776544
No 244
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=80.25 E-value=3.5 Score=38.22 Aligned_cols=80 Identities=14% Similarity=0.179 Sum_probs=54.6
Q ss_pred HHHHHCCCEEEeeCCCCCCCCCC--CC--CCCC--------CcHHHHHHHHHHHHHHh---CCCeEEEEEeChhHHHHHH
Q 021382 48 VGVATAGFRAIAPDCRGYGLSDP--PA--EPEK--------TSFQDMVDDLLAILDHL---GLAKVFLVAKDFGALTAYM 112 (313)
Q Consensus 48 ~~l~~~~~~vi~~D~~G~G~S~~--~~--~~~~--------~~~~~~~~di~~~~~~l---~~~~~~lvGhS~Gg~ia~~ 112 (313)
..+ ..||-+++-| =||..+.. .. .... -.+..++.--.++++.. ..+.-+..|.|-||.-++.
T Consensus 54 ~~~-~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 54 TAL-ARGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred hhh-hcCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 344 5699999999 68876643 11 0011 12333333334455554 4567999999999999999
Q ss_pred HHHhcccccceeeEecC
Q 021382 113 FAIQHQERVSGVITLGV 129 (313)
Q Consensus 113 ~a~~~p~~v~~lvl~~~ 129 (313)
.|++||+...+++.-.+
T Consensus 132 ~AQryP~dfDGIlAgaP 148 (474)
T PF07519_consen 132 AAQRYPEDFDGILAGAP 148 (474)
T ss_pred HHHhChhhcCeEEeCCc
Confidence 99999999999996443
No 245
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=79.64 E-value=12 Score=34.45 Aligned_cols=106 Identities=14% Similarity=0.169 Sum_probs=66.4
Q ss_pred eeeeeCCEEEEEEecCCCCCCcEEEEECCCCCchhhHH--HHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHH
Q 021382 7 KFIKVQGLNLHIAEAGADADAHVVVFLHGFPEIWYSWR--HQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVD 84 (313)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~--~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (313)
++++-.+..|.|.-.+.+-..|-.|..-|+-. ++-|+ .++..|.. =-++.-|.|=-|.+=-. +...| -+...+
T Consensus 269 r~~D~~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~--PfLL~~DpRleGGaFYl-Gs~ey-E~~I~~ 343 (511)
T TIGR03712 269 RLVDSKRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLGA--PFLLIGDPRLEGGAFYL-GSDEY-EQGIIN 343 (511)
T ss_pred eEecCCCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcCC--CeEEeeccccccceeee-CcHHH-HHHHHH
Confidence 34444555555544332223455777778854 33333 24555532 35777799988876221 11122 334666
Q ss_pred HHHHHHHHhCCC--eEEEEEeChhHHHHHHHHHhc
Q 021382 85 DLLAILDHLGLA--KVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 85 di~~~~~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
-|.+-++.||.+ ..+|-|-|||..=|+.|+++-
T Consensus 344 ~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 344 VIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 777888999986 599999999999999999874
No 246
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=79.64 E-value=11 Score=30.55 Aligned_cols=60 Identities=18% Similarity=0.196 Sum_probs=44.4
Q ss_pred EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCh----hHHHHHHHHHhc-ccccceee
Q 021382 56 RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF----GALTAYMFAIQH-QERVSGVI 125 (313)
Q Consensus 56 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~----Gg~ia~~~a~~~-p~~v~~lv 125 (313)
+|+..|.++. ..|+.+.+++-+.+++++.+ -.++|+|||- |..++.++|++- -..+..++
T Consensus 79 ~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~ 143 (202)
T cd01714 79 RAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVS 143 (202)
T ss_pred EEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEE
Confidence 6777665543 24678889999999999887 4799999998 889999998863 22444444
No 247
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=79.03 E-value=1.7 Score=38.00 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHH
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~ 115 (313)
+.++++..|+++-.++|||+|=..|+.++-
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 446778889999999999999888876653
No 248
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=78.34 E-value=2.9 Score=36.26 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcc
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 118 (313)
+.+-+++.|++.-.|.|.|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 556677788999999999999999999998653
No 249
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=77.87 E-value=2.9 Score=35.97 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHh
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
+.++++.+|+++-.++|||+|-..|..++..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 3356678899999999999999988877643
No 250
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=77.84 E-value=3.3 Score=35.96 Aligned_cols=32 Identities=16% Similarity=0.368 Sum_probs=27.5
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
+.+.+++.|+..=.++|.|+|+.++..||..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 55666777998889999999999999999875
No 251
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=77.20 E-value=4.1 Score=37.75 Aligned_cols=63 Identities=14% Similarity=0.147 Sum_probs=46.6
Q ss_pred CcEEEEeeCCCcCCCCCCchhhhhcccccccCC--------CceEEEeCCCCCCcccc--ChhHHHHHHHHHhhh
Q 021382 247 VPALLILGEKDYFLKFPGIEDYIRSGKVKDFVP--------NLEIIRLSEGSHFVQEQ--SPEEVNQLVLTFLNK 311 (313)
Q Consensus 247 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p--------~~~~~~i~~~gH~~~~e--~pe~~~~~i~~fl~~ 311 (313)
-.+++.+|..|+++++....+|+.+ +.+... -.++..+||.+||.--. .+-.....|.+|+++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~--V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYER--VVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHH--HHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 4789999999999998887777653 222221 26899999999986554 344566888888875
No 252
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=76.13 E-value=4.6 Score=34.09 Aligned_cols=100 Identities=26% Similarity=0.233 Sum_probs=58.2
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCC----------CCCCCCCCCCCC-C-----CCcHHHHHHHHHHHH
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDC----------RGYGLSDPPAEP-E-----KTSFQDMVDDLLAIL 90 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~----------~G~G~S~~~~~~-~-----~~~~~~~~~di~~~~ 90 (313)
-|.+++.||+.++...-......+...+++++..|. +|++.+...... . ......+..+.....
T Consensus 49 ~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (299)
T COG1073 49 LPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLG 128 (299)
T ss_pred CceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHHh
Confidence 467999999998876644455666677788777764 343333221100 0 001111112211222
Q ss_pred HHhCCCeEEEEEeChhHHHHHHHHHhccc--ccceeeEec
Q 021382 91 DHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVITLG 128 (313)
Q Consensus 91 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~ 128 (313)
.. ..+....|.++|+..+..++...+. ....+++.+
T Consensus 129 ~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 166 (299)
T COG1073 129 AS--LGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWG 166 (299)
T ss_pred hh--cCcceEEEEEeeccchHHHhhcchhHHHhhccccee
Confidence 22 2579999999999999999988874 344445444
No 253
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=75.75 E-value=4.3 Score=34.53 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=27.2
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
+.+.+++.|+.-=.++|.|+|+.++..||..+
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 55556778998889999999999999999864
No 254
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=74.29 E-value=4.2 Score=35.01 Aligned_cols=30 Identities=17% Similarity=-0.035 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHH
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~ 115 (313)
+.++++..|+++-.++|||+|=..|..++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 445667789999999999999988888764
No 255
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=73.62 E-value=5.8 Score=32.64 Aligned_cols=31 Identities=32% Similarity=0.354 Sum_probs=24.8
Q ss_pred HHHHHHhCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 87 LAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 87 ~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
.+.+++.+++.-.++|.|.|+.++..+|..+
T Consensus 19 L~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 3344556787789999999999999999765
No 256
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=73.57 E-value=4.1 Score=34.83 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=24.3
Q ss_pred HHHHHHhC-CCeEEEEEeChhHHHHHHHHHh
Q 021382 87 LAILDHLG-LAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 87 ~~~~~~l~-~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
.++++..| +++..++|||+|=..|..++..
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 34556677 9999999999999988887754
No 257
>PRK12467 peptide synthase; Provisional
Probab=73.48 E-value=15 Score=43.70 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=60.2
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC-CCeEEEEEeChh
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG-LAKVFLVAKDFG 106 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~-~~~~~lvGhS~G 106 (313)
+.+++.|...+....+..+...+.. ...++.+..++.-.-.+ ...++..++....+.+.... ..+..+.|+|+|
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCC-CCcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 4599999988877667665555533 57888888776532222 23467777777777776654 347999999999
Q ss_pred HHHHHHHHHh
Q 021382 107 ALTAYMFAIQ 116 (313)
Q Consensus 107 g~ia~~~a~~ 116 (313)
|.++..++..
T Consensus 3768 ~~~a~~~~~~ 3777 (3956)
T PRK12467 3768 GTLARLVAEL 3777 (3956)
T ss_pred hHHHHHHHHH
Confidence 9999998764
No 258
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=73.47 E-value=31 Score=24.87 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=48.7
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHC-CCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhH
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 107 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg 107 (313)
.||.-|| .-+......+..+... .-.+.++|+.- ..+.+++.+.+.+.++++.-++-+++=.+++|
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~-----------~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP-----------DESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT-----------TSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC-----------CCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 4788999 3333455566666655 34788877541 23688999999999998875555555566666
Q ss_pred HHHHHHHHh
Q 021382 108 LTAYMFAIQ 116 (313)
Q Consensus 108 ~ia~~~a~~ 116 (313)
......+.+
T Consensus 69 gsp~n~a~~ 77 (116)
T PF03610_consen 69 GSPFNEAAR 77 (116)
T ss_dssp SHHHHHHHH
T ss_pred CccchHHHH
Confidence 555554443
No 259
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=72.49 E-value=5.5 Score=31.19 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=26.6
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcc
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 118 (313)
+.+.+++.++..-.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344455568888899999999999999998654
No 260
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=71.12 E-value=6.6 Score=31.32 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
+.+.+++.++..=.++|.|.||.+|..++..+
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 33444556787789999999999999999864
No 261
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=70.83 E-value=2.3 Score=34.25 Aligned_cols=44 Identities=23% Similarity=0.266 Sum_probs=31.5
Q ss_pred CcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCcc
Q 021382 247 VPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQ 294 (313)
Q Consensus 247 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~ 294 (313)
.|++++.|+.|.+++ ....+. +.+++.--.++++++++++|...
T Consensus 167 Pp~~i~~g~~D~l~~--~~~~~~--~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVD--DSLRFA--EKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HEEEEEEETTSTTHH--HHHHHH--HHHHHTT-EEEEEEETTEETTGG
T ss_pred CCeeeeccccccchH--HHHHHH--HHHHHCCCCEEEEEECCCeEEee
Confidence 489999999998763 223332 34666566789999999999654
No 262
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=70.14 E-value=4.3 Score=35.78 Aligned_cols=54 Identities=20% Similarity=0.194 Sum_probs=41.1
Q ss_pred CccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCc--eEEEeCCCCCCccccChhHH
Q 021382 243 LTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNL--EIIRLSEGSHFVQEQSPEEV 301 (313)
Q Consensus 243 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~--~~~~i~~~gH~~~~e~pe~~ 301 (313)
.++++|++++.|..|.+.|+.... ..-...+|+. .+..++++.|.-++|-++++
T Consensus 248 ~~v~~P~~~~a~s~D~~aP~~~~~-----~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 248 VKVTDPVLLAAGSADGFAPPVTEQ-----IRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eeeecceeeecccccccCCccccc-----ccccccCCcchhheeecCCCccccccccCccc
Confidence 478999999999999976654321 2234566776 67889999999999987774
No 263
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.29 E-value=9.7 Score=35.11 Aligned_cols=40 Identities=25% Similarity=0.362 Sum_probs=31.0
Q ss_pred hCCCeEEEEEeChhHHHHHHHHHh-----cccccceeeEecCCCC
Q 021382 93 LGLAKVFLVAKDFGALTAYMFAIQ-----HQERVSGVITLGVPIL 132 (313)
Q Consensus 93 l~~~~~~lvGhS~Gg~ia~~~a~~-----~p~~v~~lvl~~~~~~ 132 (313)
+|-.++.|||.|.|+.+...+... .-..|..+++.|+|..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 477789999999999999876652 2346788888887654
No 264
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=64.29 E-value=6.4 Score=35.87 Aligned_cols=40 Identities=15% Similarity=0.282 Sum_probs=30.8
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceee
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 125 (313)
+.+.+.+.++.+=++.|.|.|+.+|..++...++.+..+.
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~l 130 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPELL 130 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 4444455577777999999999999999998777765544
No 265
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=63.75 E-value=11 Score=30.77 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=26.6
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcc
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ 118 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 118 (313)
+.+.+++.++.-=.++|.|.|+.+|..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 334455567777799999999999999999875
No 266
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=63.58 E-value=8.5 Score=36.22 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=26.3
Q ss_pred HHHHH-HHhCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 86 LLAIL-DHLGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 86 i~~~~-~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
+.+++ +.+|+++-.++|||+|=..|+..|--.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34555 578999999999999999998888655
No 267
>COG0218 Predicted GTPase [General function prediction only]
Probab=63.52 E-value=11 Score=30.30 Aligned_cols=15 Identities=33% Similarity=0.536 Sum_probs=12.7
Q ss_pred EEeeCCCCCCCCCCC
Q 021382 57 AIAPDCRGYGLSDPP 71 (313)
Q Consensus 57 vi~~D~~G~G~S~~~ 71 (313)
+..+|+||||....+
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 778999999997654
No 268
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=63.41 E-value=13 Score=29.22 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=25.3
Q ss_pred HHHHHhCCCeEEEEEeChhHHHHHHHHHhccc
Q 021382 88 AILDHLGLAKVFLVAKDFGALTAYMFAIQHQE 119 (313)
Q Consensus 88 ~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 119 (313)
+.+++.++.-=.++|.|.|+.+|..++..++.
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 33455677777999999999999999987643
No 269
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=63.15 E-value=6.5 Score=35.28 Aligned_cols=40 Identities=20% Similarity=0.271 Sum_probs=32.4
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceee
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 125 (313)
+.+.+.+.|+.+=++.|.|.|+.+|..+|...++.+..+.
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 4455566788888899999999999999997777776665
No 270
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=63.03 E-value=5.7 Score=31.14 Aligned_cols=60 Identities=17% Similarity=0.341 Sum_probs=40.4
Q ss_pred ccCCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCccccC---hhHHHHHHHHHhh
Q 021382 244 TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQS---PEEVNQLVLTFLN 310 (313)
Q Consensus 244 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~---pe~~~~~i~~fl~ 310 (313)
++..|.++|..++|++++.+..+ .+++.. ++.++.+..+||.--.+- =.+....+.+|+.
T Consensus 115 ~lpfps~vvaSrnDp~~~~~~a~------~~a~~w-gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 115 PLPFPSVVVASRNDPYVSYEHAE------DLANAW-GSALVDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred cCCCceeEEEecCCCCCCHHHHH------HHHHhc-cHhheecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 56689999999999999865333 344455 367888888999754432 2344455666654
No 271
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=62.58 E-value=15 Score=33.07 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=37.4
Q ss_pred CcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCcccc-----ChhHHHHHHHHHhh
Q 021382 247 VPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQ-----SPEEVNQLVLTFLN 310 (313)
Q Consensus 247 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e-----~pe~~~~~i~~fl~ 310 (313)
--+|+|+|+.|++.... . .+.+-..+..+.+.||+.|...+. +-++....|.+|-.
T Consensus 352 ~rmlFVYG~nDPW~A~~-f-------~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 352 PRMLFVYGENDPWSAEP-F-------RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CeEEEEeCCCCCcccCc-c-------ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 35999999999986321 1 122224578888999999975543 34466677777753
No 272
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=61.14 E-value=5 Score=31.01 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=29.2
Q ss_pred eCCCCCCCCCCC-CCCCCCcHHHHHHHH----HHHHHHhC----CCeEEEEEeChhHH
Q 021382 60 PDCRGYGLSDPP-AEPEKTSFQDMVDDL----LAILDHLG----LAKVFLVAKDFGAL 108 (313)
Q Consensus 60 ~D~~G~G~S~~~-~~~~~~~~~~~~~di----~~~~~~l~----~~~~~lvGhS~Gg~ 108 (313)
+-+-|||..... .....++..+++.-+ ..|-+..+ .+++.|+|.||++.
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 445689977221 112468899999988 44555543 45788888888876
No 273
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=60.79 E-value=19 Score=33.25 Aligned_cols=63 Identities=19% Similarity=0.076 Sum_probs=37.1
Q ss_pred CcEEEEeeCCCcCCCCCCchh-hhhcccccccCCCceEEEeCCCCCCccccChhHHHHHHHHHhh
Q 021382 247 VPALLILGEKDYFLKFPGIED-YIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 247 ~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
.+.+...|=.|..+++-.... .......+..-+...+.+++ +|||++.++|+...+.+..|+.
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHh
Confidence 455555666666555322210 00111222222334555665 8999999999999999998875
No 274
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=58.63 E-value=19 Score=28.17 Aligned_cols=30 Identities=17% Similarity=0.295 Sum_probs=23.9
Q ss_pred HHHHHhCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 88 AILDHLGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 88 ~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
+.+++.+++.=.++|.|.|+.+|..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334555777779999999999999999764
No 275
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=57.95 E-value=12 Score=30.05 Aligned_cols=64 Identities=16% Similarity=0.147 Sum_probs=41.6
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhcccccccCCC--ceEEEeCCCCCCccccC---hhHHHHHHHHHhhhc
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPN--LEIIRLSEGSHFVQEQS---PEEVNQLVLTFLNKH 312 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~--~~~~~i~~~gH~~~~e~---pe~~~~~i~~fl~~~ 312 (313)
++++|-|-|+.|.+...-.... +..+-.-+|. ...++.++|||+--..= -+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~A---A~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHA---AHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHH---HHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 4678889999999875432221 1123223332 35567899999865553 368889999998753
No 276
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=57.78 E-value=11 Score=29.94 Aligned_cols=33 Identities=9% Similarity=0.190 Sum_probs=24.6
Q ss_pred EEEEECC---CCCchhhHHHHHHHHHHCCCEEEeeC
Q 021382 29 VVVFLHG---FPEIWYSWRHQMVGVATAGFRAIAPD 61 (313)
Q Consensus 29 ~ivllHG---~~~~~~~w~~~~~~l~~~~~~vi~~D 61 (313)
.||++|. ...+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 5899992 34455567777888888999998875
No 277
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=57.61 E-value=11 Score=32.86 Aligned_cols=40 Identities=13% Similarity=0.244 Sum_probs=29.8
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceee
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 125 (313)
+.+.+.+.|+.+-++.|-|.|+.+|..++...++.+..+.
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~~ 125 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSFF 125 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 4444455588888899999999999999986665554443
No 278
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=56.18 E-value=16 Score=30.05 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=26.3
Q ss_pred EEEEECCC-CCchhhHHHHHHHHHHCCCEEEeeC
Q 021382 29 VVVFLHGF-PEIWYSWRHQMVGVATAGFRAIAPD 61 (313)
Q Consensus 29 ~ivllHG~-~~~~~~w~~~~~~l~~~~~~vi~~D 61 (313)
.||++|.. +.+......++..|.++||+++.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 68899964 5566677788888888999998875
No 279
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=54.84 E-value=80 Score=22.96 Aligned_cols=73 Identities=18% Similarity=0.152 Sum_probs=45.1
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCh-hH
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF-GA 107 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~-Gg 107 (313)
.||.-|| . -+......+..+....-.+.++|+.- ..+..++.+.+.++++.+.-.+=+++=.+| ||
T Consensus 3 ili~sHG-~-~A~gi~~~~~~i~G~~~~i~~~~~~~-----------~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GG 69 (122)
T cd00006 3 IIIATHG-G-FASGLLNSAEMILGEQENVEAIDFPP-----------GESPDDLLEKIKAALAELDSGEGVLILTDLFGG 69 (122)
T ss_pred EEEEcCH-H-HHHHHHHHHHHhcCCCCCeEEEEeCC-----------CCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Confidence 5788899 3 22344455555654334777777652 235778888889988888644444545555 77
Q ss_pred HHHHHHH
Q 021382 108 LTAYMFA 114 (313)
Q Consensus 108 ~ia~~~a 114 (313)
.......
T Consensus 70 Sp~n~~~ 76 (122)
T cd00006 70 SPNNAAA 76 (122)
T ss_pred CHHHHHH
Confidence 6655433
No 280
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=54.28 E-value=11 Score=34.21 Aligned_cols=40 Identities=15% Similarity=0.233 Sum_probs=31.2
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceee
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVI 125 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 125 (313)
+.+.+.+.++.+=+++|.|.|+.+|..++...++.+..++
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 4444445577777899999999999999997777776664
No 281
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=53.64 E-value=29 Score=27.70 Aligned_cols=39 Identities=26% Similarity=0.205 Sum_probs=22.4
Q ss_pred EEEeeCCCCCCCCCCCCCC-CCCcHH----HHHHHHHHHHHHhCC
Q 021382 56 RAIAPDCRGYGLSDPPAEP-EKTSFQ----DMVDDLLAILDHLGL 95 (313)
Q Consensus 56 ~vi~~D~~G~G~S~~~~~~-~~~~~~----~~~~di~~~~~~l~~ 95 (313)
.+|++| ||||.+++.... ....-. +++..+.+.+++.|.
T Consensus 1 k~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 1 KIIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred CEEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 378899 999998754211 111222 345555566666665
No 282
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=53.48 E-value=14 Score=30.93 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=24.1
Q ss_pred HHHHHHhCCC---eE-EEEEeChhHHHHHHHHHhcccccc
Q 021382 87 LAILDHLGLA---KV-FLVAKDFGALTAYMFAIQHQERVS 122 (313)
Q Consensus 87 ~~~~~~l~~~---~~-~lvGhS~Gg~ia~~~a~~~p~~v~ 122 (313)
.+.+.+.|++ ++ .+.|.|.|+.++..|+. .|+++.
T Consensus 18 l~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~-~~~~~~ 56 (246)
T cd07222 18 AKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT-APEKIE 56 (246)
T ss_pred HHHHHHcCchhhccCCEEEEECHHHHHHHHHhc-ChHHHH
Confidence 3344445653 34 89999999999999984 355443
No 283
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=53.47 E-value=23 Score=30.87 Aligned_cols=19 Identities=11% Similarity=0.246 Sum_probs=17.1
Q ss_pred EEEEeChhHHHHHHHHHhc
Q 021382 99 FLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 99 ~lvGhS~Gg~ia~~~a~~~ 117 (313)
.+.|.|+||.||..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6899999999999999755
No 284
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=52.91 E-value=20 Score=26.59 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=17.1
Q ss_pred CCCcEEEEECCCCCchhhHH
Q 021382 25 ADAHVVVFLHGFPEIWYSWR 44 (313)
Q Consensus 25 ~~~~~ivllHG~~~~~~~w~ 44 (313)
+.+|-|+-+|||+|...+|-
T Consensus 50 p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCEEEEeecCCCCcHHHH
Confidence 45788999999999988884
No 285
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=51.27 E-value=1.9e+02 Score=26.20 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=52.5
Q ss_pred cEEEEECCCCCch---hhHHHHHHHHHHCCCEEEeeCCCCC--CCCCCCCCCCCCcHHHHHHHHHHHHHH---hCCCeEE
Q 021382 28 HVVVFLHGFPEIW---YSWRHQMVGVATAGFRAIAPDCRGY--GLSDPPAEPEKTSFQDMVDDLLAILDH---LGLAKVF 99 (313)
Q Consensus 28 ~~ivllHG~~~~~---~~w~~~~~~l~~~~~~vi~~D~~G~--G~S~~~~~~~~~~~~~~~~di~~~~~~---l~~~~~~ 99 (313)
.|||++.-+.... ......+..|.+.|+.|+-|..=-+ |.... ...-+.+++.+.+.+.+.. +..+++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~---g~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGK---GRLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccC---CCCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 3677777654432 1335566777777877776652212 33321 1234677888777776644 5556777
Q ss_pred EEEe------------------ChhHHHHHHHHHhc
Q 021382 100 LVAK------------------DFGALTAYMFAIQH 117 (313)
Q Consensus 100 lvGh------------------S~Gg~ia~~~a~~~ 117 (313)
+.|- .||..+|..++.+-
T Consensus 190 it~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G 225 (390)
T TIGR00521 190 ITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG 225 (390)
T ss_pred EecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC
Confidence 7776 47777777777653
No 286
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=50.48 E-value=50 Score=25.36 Aligned_cols=49 Identities=24% Similarity=0.202 Sum_probs=31.5
Q ss_pred CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHH
Q 021382 53 AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYM 112 (313)
Q Consensus 53 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~ 112 (313)
.+-.||+.|.+|=- .+-+++|+.+..+. ..|-+=..++|-|.|=.=+..
T Consensus 66 ~~~~vi~Ld~~Gk~----------~sSe~fA~~l~~~~-~~G~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 66 KGSYVVLLDIRGKA----------LSSEEFADFLERLR-DDGRDISFLIGGADGLSEAVK 114 (155)
T ss_pred CCCeEEEEecCCCc----------CChHHHHHHHHHHH-hcCCeEEEEEeCcccCCHHHH
Confidence 46799999999832 34557776665553 345233788888888444443
No 287
>COG3933 Transcriptional antiterminator [Transcription]
Probab=49.49 E-value=1.3e+02 Score=27.53 Aligned_cols=75 Identities=21% Similarity=0.214 Sum_probs=55.6
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhH
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 107 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg 107 (313)
..||..||....+. -..++.+|+.. =-+.++|+|= ..++.+..+.+.+-+++....+=.++=-+||+
T Consensus 110 ~vIiiAHG~sTASS-maevanrLL~~-~~~~aiDMPL-----------dvsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYSTASS-MAEVANRLLGE-EIFIAIDMPL-----------DVSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcchHHH-HHHHHHHHhhc-cceeeecCCC-----------cCCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 48999999977653 34578888764 5799999982 23566788888888888876665677779999
Q ss_pred HHHHHHHH
Q 021382 108 LTAYMFAI 115 (313)
Q Consensus 108 ~ia~~~a~ 115 (313)
..+..=..
T Consensus 177 L~~f~~~i 184 (470)
T COG3933 177 LTSFGSII 184 (470)
T ss_pred HHHHHHHH
Confidence 87766444
No 288
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=49.28 E-value=98 Score=25.62 Aligned_cols=60 Identities=20% Similarity=0.282 Sum_probs=32.2
Q ss_pred EEEeeCCCCCCCCCCCCCC---C---CCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHh
Q 021382 56 RAIAPDCRGYGLSDPPAEP---E---KTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 56 ~vi~~D~~G~G~S~~~~~~---~---~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
-+++|-++ ||.|...... - .-++..+..|+.+-+...|+++++++..--|-.-++..+++
T Consensus 56 ~lv~P~i~-yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~ 121 (237)
T PF02633_consen 56 ALVLPPIP-YGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAR 121 (237)
T ss_dssp EEE---B---BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHH
T ss_pred EEEeCCCc-cccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHH
Confidence 67777777 8887654221 1 22555666666666666799998888887775545555543
No 289
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=49.17 E-value=27 Score=29.49 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=26.3
Q ss_pred HHHHHHHhCCC-eEEEEEeChhHHHHHHHHHhccccc
Q 021382 86 LLAILDHLGLA-KVFLVAKDFGALTAYMFAIQHQERV 121 (313)
Q Consensus 86 i~~~~~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~~v 121 (313)
+.+.+.+.++. -=.++|.|.|+.++..+++..+.+.
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~~ 52 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGRA 52 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcchH
Confidence 33344455666 4499999999999999998765543
No 290
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=49.07 E-value=23 Score=30.78 Aligned_cols=113 Identities=13% Similarity=0.011 Sum_probs=66.0
Q ss_pred CCEEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 021382 12 QGLNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 91 (313)
Q Consensus 12 ~g~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~ 91 (313)
+|+...|+..-+.. .-||+++--.|. ..|..+.+.+..+++.-.-.=++-||..-... ...+-..=..-+..++.
T Consensus 199 pGV~~~yr~l~~~~-~apvfYvSnSPw--~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i--~~sga~rK~~~l~nil~ 273 (373)
T COG4850 199 PGVSAWYRALTNLG-DAPVFYVSNSPW--QLFPTLQEFITNRNFPYGPLLLRRWGGVLDNI--IESGAARKGQSLRNILR 273 (373)
T ss_pred CCHHHHHHHHHhcC-CCCeEEecCChh--HhHHHHHHHHhcCCCCCCchhHhhcCCccccc--ccchhhhcccHHHHHHH
Confidence 55555555433321 146877765553 36777667776665665555566666321110 01111122334666778
Q ss_pred HhCCCeEEEEEeChh--HHHHHHHHHhcccccceeeEecC
Q 021382 92 HLGLAKVFLVAKDFG--ALTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 92 ~l~~~~~~lvGhS~G--g~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
.+.-.||+|||-|-= --|=..++.++|++|.++-+-+.
T Consensus 274 ~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdv 313 (373)
T COG4850 274 RYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDV 313 (373)
T ss_pred hCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeec
Confidence 888889999998732 13444556789999999987654
No 291
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=48.18 E-value=37 Score=27.49 Aligned_cols=60 Identities=22% Similarity=0.427 Sum_probs=40.4
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhcccccccCCC-ceEEEeCCCCCCcccc-ChhHHHHHHHHHh
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPN-LEIIRLSEGSHFVQEQ-SPEEVNQLVLTFL 309 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~-~~~~~i~~~gH~~~~e-~pe~~~~~i~~fl 309 (313)
.+|..+.....|+......... .....+..++ .+++.++ ++|+-++. +..++++.|.++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~---~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 168 KVPITLFYALDDPLVSMDRLEE---ADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSEEEEEEECSSSSSSHHCGGH---HCHHHGCBSSSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCccccchhhhh---HHHHHHhcCCCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 4678888898888764321111 1123455554 6788898 59988886 7788888888875
No 292
>cd00739 DHPS DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.
Probab=47.88 E-value=1.1e+02 Score=25.75 Aligned_cols=77 Identities=19% Similarity=0.345 Sum_probs=40.3
Q ss_pred CcEEEEEC--CCCCch--------------hhHHHHHHHHHHCCCE--EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 021382 27 AHVVVFLH--GFPEIW--------------YSWRHQMVGVATAGFR--AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 88 (313)
Q Consensus 27 ~~~ivllH--G~~~~~--------------~~w~~~~~~l~~~~~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~ 88 (313)
+.++|++| |-|... ..+...++.+.+.|+. =|.+| ||+|.+... ..+ -+....+..
T Consensus 120 ~~~vV~m~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Gi~~~~Ii~D-Pg~gf~ks~----~~~-~~~l~~i~~ 193 (257)
T cd00739 120 GAPLVLMHMRGTPKTMQENPYYEDVVDEVLSFLEARLEAAESAGVARNRIILD-PGIGFGKTP----EHN-LELLRRLDE 193 (257)
T ss_pred CCCEEEECCCCCCcccccCCCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEe-cCCCcccCH----HHH-HHHHHHHHH
Confidence 45777788 555431 1133444555556764 67888 477764321 111 122222322
Q ss_pred HHHHhCCCeEEEEEeChhHHHHHH
Q 021382 89 ILDHLGLAKVFLVAKDFGALTAYM 112 (313)
Q Consensus 89 ~~~~l~~~~~~lvGhS~Gg~ia~~ 112 (313)
+ +++ +-..++|.|-=+++.-.
T Consensus 194 l-~~~--~~pil~G~SrkSfig~~ 214 (257)
T cd00739 194 L-KQL--GLPVLVGASRKSFIGAL 214 (257)
T ss_pred H-HhC--CCcEEEEecccHHHHHh
Confidence 2 223 44779999877766543
No 293
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=47.48 E-value=21 Score=30.08 Aligned_cols=21 Identities=10% Similarity=0.512 Sum_probs=15.3
Q ss_pred HHHHHh-CCCeEEEEEeChhHH
Q 021382 88 AILDHL-GLAKVFLVAKDFGAL 108 (313)
Q Consensus 88 ~~~~~l-~~~~~~lvGhS~Gg~ 108 (313)
.+.+.+ .++.++++|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 334444 467899999999974
No 294
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=46.58 E-value=2.2e+02 Score=25.92 Aligned_cols=85 Identities=18% Similarity=0.222 Sum_probs=50.5
Q ss_pred cEEEEECCCCCchh---hHHHHHHHHHHCCCEEEeeCCCCC---CCCCCCCCCCCCcHHHHHHHHHHHHHH--hCCCeEE
Q 021382 28 HVVVFLHGFPEIWY---SWRHQMVGVATAGFRAIAPDCRGY---GLSDPPAEPEKTSFQDMVDDLLAILDH--LGLAKVF 99 (313)
Q Consensus 28 ~~ivllHG~~~~~~---~w~~~~~~l~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~di~~~~~~--l~~~~~~ 99 (313)
.|||++.-+..... .....+..|.+.|+.|+-|+ +|+ |.... +.--..++..+.+...+.. +.-+++.
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~---gr~~~~~~I~~~~~~~~~~~~l~gk~vl 192 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGP---GRMAEPEEIVAAAERALSPKDLAGKRVL 192 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCC---CCCCCHHHHHHHHHHHhhhcccCCCEEE
Confidence 46777776643321 23456677777888888664 444 33221 1234667777777766643 4455778
Q ss_pred EEEe---------------C---hhHHHHHHHHHh
Q 021382 100 LVAK---------------D---FGALTAYMFAIQ 116 (313)
Q Consensus 100 lvGh---------------S---~Gg~ia~~~a~~ 116 (313)
+-|- | ||..+|..++.+
T Consensus 193 ITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~ 227 (399)
T PRK05579 193 ITAGPTREPIDPVRYITNRSSGKMGYALARAAARR 227 (399)
T ss_pred EeCCCccccccceeeeccCCcchHHHHHHHHHHHC
Confidence 8777 2 566666666664
No 295
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=46.11 E-value=22 Score=30.42 Aligned_cols=66 Identities=14% Similarity=0.233 Sum_probs=41.5
Q ss_pred cCCcEEEEeeCCCcCCCCCCchhhhh-------------------cccccccCC--CceEEEeCCCCCCccccChhHHHH
Q 021382 245 VKVPALLILGEKDYFLKFPGIEDYIR-------------------SGKVKDFVP--NLEIIRLSEGSHFVQEQSPEEVNQ 303 (313)
Q Consensus 245 i~~P~l~i~G~~D~~~~~~~~~~~~~-------------------~~~~~~~~p--~~~~~~i~~~gH~~~~e~pe~~~~ 303 (313)
-++|+++++|.+|.++..+...+... ...+++... ...-+.|.+.||+.+-.+|+-+++
T Consensus 211 ~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~ 290 (297)
T PF06342_consen 211 KPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAE 290 (297)
T ss_pred CCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHH
Confidence 34899999999999873222111100 011112211 223346677899999999999999
Q ss_pred HHHHHhh
Q 021382 304 LVLTFLN 310 (313)
Q Consensus 304 ~i~~fl~ 310 (313)
.+.+.|+
T Consensus 291 ~i~~mfe 297 (297)
T PF06342_consen 291 AIKKMFE 297 (297)
T ss_pred HHHHhhC
Confidence 9887663
No 296
>PRK02399 hypothetical protein; Provisional
Probab=46.10 E-value=2.3e+02 Score=25.72 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=62.8
Q ss_pred EEECCCCCch-hhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCC---------------------CCCCcHHHHHHHHHH
Q 021382 31 VFLHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE---------------------PEKTSFQDMVDDLLA 88 (313)
Q Consensus 31 vllHG~~~~~-~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~---------------------~~~~~~~~~~~di~~ 88 (313)
|+|=|-.++. .....+-..+.+.|..|+.+|.-..|....+.+ ....-++.++.-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 3444555554 345555556666689999999843332111110 011223445555566
Q ss_pred HHHHh----CCCeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 89 ILDHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 89 ~~~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
+++.| +++-++-+|-|+|..++...+..-|--+-+++...
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVST 129 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVST 129 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEc
Confidence 66653 47789999999999999999998898888888654
No 297
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=45.50 E-value=2.4e+02 Score=25.66 Aligned_cols=96 Identities=10% Similarity=0.047 Sum_probs=62.8
Q ss_pred ECCCCCch-hhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCC---------------------CCCCcHHHHHHHHHHHH
Q 021382 33 LHGFPEIW-YSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAE---------------------PEKTSFQDMVDDLLAIL 90 (313)
Q Consensus 33 lHG~~~~~-~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~---------------------~~~~~~~~~~~di~~~~ 90 (313)
|=|-.++. ..+..+-..+.+.|.+++.+|.==.|.+..+.+ .....++.+++-...++
T Consensus 6 iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v 85 (403)
T PF06792_consen 6 IIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFV 85 (403)
T ss_pred EEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHH
Confidence 33444443 456666667777899999999543333322211 01123344555555566
Q ss_pred HHh----CCCeEEEEEeChhHHHHHHHHHhcccccceeeEec
Q 021382 91 DHL----GLAKVFLVAKDFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 91 ~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
..+ .++-++-+|-|.|..++...+..-|=-+-+++...
T Consensus 86 ~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 86 SDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred HHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 665 46779999999999999999998898888888654
No 298
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=45.20 E-value=48 Score=28.53 Aligned_cols=41 Identities=24% Similarity=0.295 Sum_probs=24.7
Q ss_pred CCEEEeeCCCCCCCCCCCCCC-CCCcH----HHHHHHHHHHHHHhCC
Q 021382 54 GFRAIAPDCRGYGLSDPPAEP-EKTSF----QDMVDDLLAILDHLGL 95 (313)
Q Consensus 54 ~~~vi~~D~~G~G~S~~~~~~-~~~~~----~~~~~di~~~~~~l~~ 95 (313)
+-++|++| ||||..++..-. ....- -+++..+.+.++..|.
T Consensus 55 ~~~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~ 100 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGI 100 (287)
T ss_pred CCeEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCC
Confidence 45799999 999998754211 12222 2355555666666665
No 299
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=45.08 E-value=26 Score=33.18 Aligned_cols=49 Identities=20% Similarity=0.419 Sum_probs=33.0
Q ss_pred cc-CCcEEEEeeCCCcCCCCC-Cchhhhhccc-ccccCCCceEEEeCCCCCC
Q 021382 244 TV-KVPALLILGEKDYFLKFP-GIEDYIRSGK-VKDFVPNLEIIRLSEGSHF 292 (313)
Q Consensus 244 ~i-~~P~l~i~G~~D~~~~~~-~~~~~~~~~~-~~~~~p~~~~~~i~~~gH~ 292 (313)
++ ..|+++++|+.|.++|.. ....|+...+ .+-.....+++++.++-|+
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 44 689999999999999864 3344433211 1122345788999999886
No 300
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=44.92 E-value=55 Score=30.11 Aligned_cols=45 Identities=29% Similarity=0.238 Sum_probs=25.2
Q ss_pred EEEeeCCCCCCCCCCCCCC-CCCcHH----HHHHHHHHHHHHhCCCeEEEE
Q 021382 56 RAIAPDCRGYGLSDPPAEP-EKTSFQ----DMVDDLLAILDHLGLAKVFLV 101 (313)
Q Consensus 56 ~vi~~D~~G~G~S~~~~~~-~~~~~~----~~~~di~~~~~~l~~~~~~lv 101 (313)
-+|++| ||||..++..-. ....-. +++..+.+.+++.+.-++++.
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv~L~iA~~L~~~L~~~~g~~VvlT 241 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVLT 241 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 489999 999998764221 111112 355566666666532244443
No 301
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=44.34 E-value=38 Score=28.30 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=25.8
Q ss_pred HHHHHHHhCCC--e--EEEEEeChhHHHHHHHHHhcc-cccc
Q 021382 86 LLAILDHLGLA--K--VFLVAKDFGALTAYMFAIQHQ-ERVS 122 (313)
Q Consensus 86 i~~~~~~l~~~--~--~~lvGhS~Gg~ia~~~a~~~p-~~v~ 122 (313)
+.+.+.+.++. + -.++|-|.|+.++..|+...+ +.+.
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~ 58 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVSMEEAC 58 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCCHHHHH
Confidence 33344445554 2 389999999999999998764 5543
No 302
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=44.23 E-value=33 Score=29.19 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=26.6
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHCCCEEEeeC
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPD 61 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D 61 (313)
.|||+|-...+......++..|.++||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 588999766666677778888888999998875
No 303
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=43.03 E-value=39 Score=27.99 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCe--EEEEEeChhHHHHHHHHHhcc
Q 021382 86 LLAILDHLGLAK--VFLVAKDFGALTAYMFAIQHQ 118 (313)
Q Consensus 86 i~~~~~~l~~~~--~~lvGhS~Gg~ia~~~a~~~p 118 (313)
+.+.+.+.++.+ -.++|-|.|+.++..|+...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 444445567753 489999999999999998754
No 304
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=41.64 E-value=53 Score=23.44 Aligned_cols=70 Identities=24% Similarity=0.254 Sum_probs=40.2
Q ss_pred EEEECCCCCchhhHHHHHHHHHHC-CCEEEeeCC--CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh----CCCeEEEEE
Q 021382 30 VVFLHGFPEIWYSWRHQMVGVATA-GFRAIAPDC--RGYGLSDPPAEPEKTSFQDMVDDLLAILDHL----GLAKVFLVA 102 (313)
Q Consensus 30 ivllHG~~~~~~~w~~~~~~l~~~-~~~vi~~D~--~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l----~~~~~~lvG 102 (313)
||+|-|-+++..+- ++..|++. ++.++..|- +-.+..... ...........+.+.+.++.+ ..+.+++-|
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~g 77 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERD-DDEREYIDADIDLLDDILEQLQNKPDNDNWIIDG 77 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGC-TTCCHHHHHHHHHHHHHHHHHHETTT--EEEEEC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccC-cchhhHHHHHHHHHHHHHHhhhccCCCCeEEEeC
Confidence 68899999887653 45556654 899999998 555555322 111111334445555666665 233455555
No 305
>PF01520 Amidase_3: N-acetylmuramoyl-L-alanine amidase; InterPro: IPR002508 The cell wall envelope of Gram-positive bacteria is a macromolecular, exoskeletal organelle that is assembled and turned over at designated sites. The cell wall also functions as a surface organelle that allows Gram-positive pathogens to interact with their environment, in particular the tissues of the infected host. All of these functions require that surface proteins and enzymes be properly targeted to the cell wall envelope. Two basic mechanisms, cell wall sorting and targeting, have been identified. Cell well sorting is the covalent attachment of surface proteins to the peptidoglycan via a C-terminal sorting signal that contains a consensus LPXTG sequence. More than 100 proteins that possess cell wall-sorting signals, including the M proteins of Streptococcus pyogenes, protein A of Staphylococcus aureus, and several internalins of Listeria monocytogenes, have been identified. Cell wall targeting involves the noncovalent attachment of proteins to the cell surface via specialised binding domains. Several of these wall-binding domains appear to interact with secondary wall polymers that are associated with the peptidoglycan, for example teichoic acids and polysaccharides. Proteins that are targeted to the cell surface include muralytic enzymes such as autolysins, lysostaphin, and phage lytic enzymes. Other examples for targeted proteins are the surface S-layer proteins of bacilli and clostridia, as well as virulence factors required for the pathogenesis of L. monocytogenes (internalin B) and Streptococcus pneumoniae (PspA) infections []. Autolysin 3.5.1.28 from EC hydrolyses the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell wall glycopeptides.; GO: 0008745 N-acetylmuramoyl-L-alanine amidase activity, 0009253 peptidoglycan catabolic process; PDB: 3QAY_A 3CZX_A 1JWQ_A 1XOV_A 3NE8_A.
Probab=40.16 E-value=26 Score=27.25 Aligned_cols=45 Identities=31% Similarity=0.397 Sum_probs=25.2
Q ss_pred EeeCCCCCCCCCCCCCC-CCCcHH----HHHHHHHHHHHHhCCCeEEEEEeC
Q 021382 58 IAPDCRGYGLSDPPAEP-EKTSFQ----DMVDDLLAILDHLGLAKVFLVAKD 104 (313)
Q Consensus 58 i~~D~~G~G~S~~~~~~-~~~~~~----~~~~di~~~~~~l~~~~~~lvGhS 104 (313)
|++| ||||..++.... ..+.-. +++.-+.+.+++.|+ ++++.--+
T Consensus 1 I~id-pGHgg~d~Ga~~~~g~~E~~~~l~ia~~l~~~L~~~g~-~V~~tr~~ 50 (175)
T PF01520_consen 1 IVID-PGHGGNDPGAVGPNGIREKDINLDIALRLKKELEKHGI-KVYLTRDN 50 (175)
T ss_dssp EEEE-EEEBTTBTSSBCTTSCBHHHHHHHHHHHHHHHHHHTTE-EEEESSSS
T ss_pred CEEE-CCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhcCCc-EEEEeCCC
Confidence 5677 899987653211 223333 355555566666673 55655544
No 306
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=40.03 E-value=40 Score=29.16 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=25.0
Q ss_pred HHHhCCCeEEEEEeChhHHHHHHHHHhccccc
Q 021382 90 LDHLGLAKVFLVAKDFGALTAYMFAIQHQERV 121 (313)
Q Consensus 90 ~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 121 (313)
+.+.++.+=++.|.|.|+.+|..++....+.+
T Consensus 91 L~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 91 LWEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 33456777789999999999999998655444
No 307
>PRK07451 translation initiation factor Sui1; Validated
Probab=39.85 E-value=1.5e+02 Score=21.63 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=47.7
Q ss_pred EEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 021382 15 NLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLG 94 (313)
Q Consensus 15 ~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~ 94 (313)
+|.+...|. .+..|-.|-|++........++..|... -|+|.|-... .--=.-+..+.+.+++...|
T Consensus 41 rI~~~r~gR--~GK~VTvV~Gl~~~~~dlk~LaK~LK~k---------~gcGGtvkd~--~IelQGD~r~~v~~~L~~~G 107 (115)
T PRK07451 41 RVQATRSGR--KGKTVTVITGFQHKPETLAKLLKQLKTQ---------CGSGGTVKDN--TIEIQGDHRQKILEILIKLG 107 (115)
T ss_pred EEEEEecCC--CCCeEEEEeCCCCCHHHHHHHHHHHHHH---------hcCCceEcCC--EEEEcCcHHHHHHHHHHHCC
Confidence 333334453 3678999999998766666777777553 5888885432 11112267788899999988
Q ss_pred CCeEEEEE
Q 021382 95 LAKVFLVA 102 (313)
Q Consensus 95 ~~~~~lvG 102 (313)
. ++.++|
T Consensus 108 f-~~k~~g 114 (115)
T PRK07451 108 Y-KAKISG 114 (115)
T ss_pred C-eEeecc
Confidence 7 455554
No 308
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=39.63 E-value=62 Score=21.60 Aligned_cols=39 Identities=18% Similarity=0.173 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHH----hCCCeEEEEEeChhHHHHHHHHHhc
Q 021382 79 FQDMVDDLLAILDH----LGLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 79 ~~~~~~di~~~~~~----l~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
....+++-.+.++. -|-+++-++|-|-|=.+|.+.++.+
T Consensus 19 C~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 33444444444444 3568899999999999999998876
No 309
>cd02696 MurNAc-LAA N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs
Probab=39.60 E-value=54 Score=25.41 Aligned_cols=44 Identities=30% Similarity=0.323 Sum_probs=24.5
Q ss_pred EeeCCCCCCCCCCCCCCC-CCcHH----HHHHHHHHHHHHhCCCeEEEEEe
Q 021382 58 IAPDCRGYGLSDPPAEPE-KTSFQ----DMVDDLLAILDHLGLAKVFLVAK 103 (313)
Q Consensus 58 i~~D~~G~G~S~~~~~~~-~~~~~----~~~~di~~~~~~l~~~~~~lvGh 103 (313)
|++| +|||.+++..... .++-. +++..+.+.+++.|+ ++++.--
T Consensus 2 v~ld-~GHg~~~~Ga~~~~g~~E~~~~~~ia~~l~~~L~~~G~-~v~~~r~ 50 (172)
T cd02696 2 IVID-PGHGGKDPGAVGNDGLKEKDINLAIALKLAKLLEAAGA-KVVLTRD 50 (172)
T ss_pred EEEe-CCCCCCCCCCcCCCCCchHHHHHHHHHHHHHHHHHCCC-EEEEEec
Confidence 6677 9999987542211 23322 455555566666665 4444443
No 310
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=39.39 E-value=1.1e+02 Score=27.23 Aligned_cols=66 Identities=15% Similarity=0.200 Sum_probs=43.4
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEE
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 101 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lv 101 (313)
..+|+.+-|.-+|+- .+..|.++||.|+.+-+.-+..+ .....+..+-..|...+.++||| +++++
T Consensus 4 ~kV~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~----~~~~C~s~~d~~da~~va~~LGI-p~~~v 69 (356)
T COG0482 4 KKVLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDED----GGGGCCSEEDLRDAERVADQLGI-PLYVV 69 (356)
T ss_pred cEEEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccC----CCCcCCchhHHHHHHHHHHHhCC-ceEEE
Confidence 347888888877752 33456678999999998876541 11223444556677888888887 45554
No 311
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=38.22 E-value=87 Score=30.57 Aligned_cols=78 Identities=14% Similarity=0.202 Sum_probs=50.5
Q ss_pred CCcEEEEECCCCCc----------hhhHHHHHHHHHHCCCEEEeeCCCC---CCCCCCCCCCC----CCcHHHHHHHHHH
Q 021382 26 DAHVVVFLHGFPEI----------WYSWRHQMVGVATAGFRAIAPDCRG---YGLSDPPAEPE----KTSFQDMVDDLLA 88 (313)
Q Consensus 26 ~~~~ivllHG~~~~----------~~~w~~~~~~l~~~~~~vi~~D~~G---~G~S~~~~~~~----~~~~~~~~~di~~ 88 (313)
++.+||+.|..... ...|..++..|.+.||++|..|..= .|....|+..- +.++.+....+..
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 46799999987432 3469999999988899999998431 12222222111 1123356677888
Q ss_pred HHHHhCCCe-EEEEEe
Q 021382 89 ILDHLGLAK-VFLVAK 103 (313)
Q Consensus 89 ~~~~l~~~~-~~lvGh 103 (313)
++++.++.- +.++|.
T Consensus 127 ILKkyg~pATfFvVg~ 142 (672)
T PRK14581 127 LLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHcCCCEEEEEech
Confidence 999999864 445553
No 312
>PRK06824 translation initiation factor Sui1; Validated
Probab=38.03 E-value=1.6e+02 Score=21.55 Aligned_cols=75 Identities=19% Similarity=0.128 Sum_probs=49.0
Q ss_pred EEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 021382 14 LNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL 93 (313)
Q Consensus 14 ~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l 93 (313)
++|++...|. .+..|-.|-|++........++..|... -|+|.|-... .--=.-+..+.+.+++...
T Consensus 43 vri~~~~kgr--~gK~VTvI~Gl~~~~~dlk~l~K~LKkk---------~gcGGtvkd~--~IeiQGD~r~~v~~~L~~~ 109 (118)
T PRK06824 43 VRVRRETKGR--GGKTVTVITGVPLAEDALKELAKELKRR---------CGTGGTLKDG--VIEIQGDHVELLLAELLKR 109 (118)
T ss_pred EEEEEEEccC--CCceEEEEeCCcCCHHHHHHHHHHHHHH---------hcCCceEecC--EEEEcCcHHHHHHHHHHHC
Confidence 4555555554 3678999999998877777777777653 6788875431 1111125677888888888
Q ss_pred CCCeEEEEE
Q 021382 94 GLAKVFLVA 102 (313)
Q Consensus 94 ~~~~~~lvG 102 (313)
|. ++.++|
T Consensus 110 G~-~~k~~g 117 (118)
T PRK06824 110 GF-KAKKAG 117 (118)
T ss_pred CC-eEeecc
Confidence 87 344444
No 313
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=37.18 E-value=2e+02 Score=24.31 Aligned_cols=75 Identities=20% Similarity=0.312 Sum_probs=38.2
Q ss_pred CcEEEEEC--CCCCch--------------hhHHHHHHHHHHCCC--EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 021382 27 AHVVVFLH--GFPEIW--------------YSWRHQMVGVATAGF--RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLA 88 (313)
Q Consensus 27 ~~~ivllH--G~~~~~--------------~~w~~~~~~l~~~~~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~ 88 (313)
+.++|++| |.|.+. ..+...+..+.+.|. .=+.+|. |.|..... .. --+..+.+..
T Consensus 118 ~~~vV~m~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Gi~~~~iilDP-g~gf~ks~----~~-~~~~l~~i~~ 191 (257)
T TIGR01496 118 GVPLVLMHMRGTPRTMQENPHYEDVVEEVLRFLEARAEELVAAGVAAERIILDP-GIGFGKTP----EH-NLELLKHLEE 191 (257)
T ss_pred CCcEEEEeCCCCCcccccCCCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEEC-CCCcccCH----HH-HHHHHHHHHH
Confidence 45677788 555442 113444455555666 4677885 88865311 01 1122223333
Q ss_pred HHHHhCCCeEEEEEeChhHHHH
Q 021382 89 ILDHLGLAKVFLVAKDFGALTA 110 (313)
Q Consensus 89 ~~~~l~~~~~~lvGhS~Gg~ia 110 (313)
+- ++ ....++|.|-=+++.
T Consensus 192 l~-~~--~~p~l~G~SrkSfig 210 (257)
T TIGR01496 192 FV-AL--GYPLLVGASRKSFIG 210 (257)
T ss_pred HH-hC--CCcEEEEecccHHHH
Confidence 22 23 346889997544444
No 314
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=36.97 E-value=2.4e+02 Score=23.20 Aligned_cols=61 Identities=25% Similarity=0.397 Sum_probs=35.5
Q ss_pred CCcEEEEECCCCCchhhHHHHHH-HHHHCCC-EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEE
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMV-GVATAGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLV 101 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~-~l~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lv 101 (313)
+...|++.||-..++...---++ .+.+.|| .|+.--.-|| | ..+++.+-++.-++++++|+
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y-----P----------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY-----P----------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC-----C----------cHHHHHHHHHHcCCceEEEe
Confidence 34578888998766544222222 3334455 4444433333 1 15667777788889887775
No 315
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=36.96 E-value=1.4e+02 Score=26.07 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=55.6
Q ss_pred EEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCC-CCCcHHHHH--HHHHHHHHHhCCCe------EEEE
Q 021382 31 VFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEP-EKTSFQDMV--DDLLAILDHLGLAK------VFLV 101 (313)
Q Consensus 31 vllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~--~di~~~~~~l~~~~------~~lv 101 (313)
||+-|..+-.. .+....|++.||.|+.+|..-.|..+.-... ...-..++. +-+.+++++..++- ...|
T Consensus 3 iLVtGGAGYIG--SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 3 VLVTGGAGYIG--SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred EEEecCcchhH--HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 45666544321 1234456678999999999988865432210 011111222 24666777777764 3356
Q ss_pred EeCh-----------hHHHHHHHHHhcccccceeeEecCC
Q 021382 102 AKDF-----------GALTAYMFAIQHQERVSGVITLGVP 130 (313)
Q Consensus 102 GhS~-----------Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (313)
|-|+ +|.+.+.=+... ..|+.+|+.+++
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~-~gv~~~vFSStA 119 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQ-TGVKKFIFSSTA 119 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHH-hCCCEEEEecch
Confidence 6664 566666655544 359999987643
No 316
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=36.93 E-value=39 Score=29.32 Aligned_cols=17 Identities=18% Similarity=0.610 Sum_probs=15.5
Q ss_pred EEEEeChhHHHHHHHHH
Q 021382 99 FLVAKDFGALTAYMFAI 115 (313)
Q Consensus 99 ~lvGhS~Gg~ia~~~a~ 115 (313)
.++|.|.||.||..++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48899999999999986
No 317
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=36.55 E-value=2.9e+02 Score=24.65 Aligned_cols=37 Identities=22% Similarity=0.413 Sum_probs=28.8
Q ss_pred EEEECC-CCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCC
Q 021382 30 VVFLHG-FPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSD 69 (313)
Q Consensus 30 ivllHG-~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~ 69 (313)
|||+|. ||+ -|+++++.|.+.|+.|..+-+.+.+...
T Consensus 2 il~~~~~~p~---~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFPG---QFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCch---hHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 789985 565 4788999999899999888777776543
No 318
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=36.23 E-value=57 Score=27.29 Aligned_cols=24 Identities=17% Similarity=0.177 Sum_probs=19.7
Q ss_pred EEEEeChhHHHHHHHHHhcc-cccc
Q 021382 99 FLVAKDFGALTAYMFAIQHQ-ERVS 122 (313)
Q Consensus 99 ~lvGhS~Gg~ia~~~a~~~p-~~v~ 122 (313)
.+.|-|.|+.+|..++...+ +++.
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~~~~~~ 57 (245)
T cd07218 33 KISGASAGALAACCLLCDLPLGEMT 57 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCcHHHHH
Confidence 49999999999999998754 4444
No 319
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=36.00 E-value=62 Score=30.71 Aligned_cols=47 Identities=13% Similarity=0.207 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEEe------ChhHHHHHHHHHhcccccceeeEec
Q 021382 79 FQDMVDDLLAILDHLGLAKVFLVAK------DFGALTAYMFAIQHQERVSGVITLG 128 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~~~~~~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (313)
...+..-+.+++.. .++++++|| +.|+.+++..-+..-++ .+.+.++
T Consensus 323 aRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~d 375 (655)
T COG3887 323 ARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLD 375 (655)
T ss_pred HHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEEC
Confidence 33455555555554 689999999 78999998876655444 4555555
No 320
>PF15566 Imm18: Immunity protein 18
Probab=35.87 E-value=40 Score=20.53 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHHHHHhCCCeEEEEEeChhHH
Q 021382 78 SFQDMVDDLLAILDHLGLAKVFLVAKDFGAL 108 (313)
Q Consensus 78 ~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ 108 (313)
.+.-++++|..+.+....+..|++=-||||.
T Consensus 3 gL~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 3 GLELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred hHHHHHHHHHHHHhccCCCCceecccccccc
Confidence 3567788888888887677899999999985
No 321
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.50 E-value=28 Score=26.99 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=50.7
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHCCCE-EEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhH
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATAGFR-AIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGA 107 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg 107 (313)
-||..-||+.....+.+++ +.+.+. ++++|......- ..+. ..+.+-||++|||=
T Consensus 13 LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~ld--------fDfs-------------Ay~hirlvAwSMGV 68 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLNLD--------FDFS-------------AYRHIRLVAWSMGV 68 (214)
T ss_pred EEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcCcc--------cchh-------------hhhhhhhhhhhHHH
Confidence 6788889988877666543 233454 789998765321 1121 12356789999999
Q ss_pred HHHHHHHHhcccccceeeEecC
Q 021382 108 LTAYMFAIQHQERVSGVITLGV 129 (313)
Q Consensus 108 ~ia~~~a~~~p~~v~~lvl~~~ 129 (313)
.+|-++..-.+ .++.+.++.
T Consensus 69 wvAeR~lqg~~--lksatAiNG 88 (214)
T COG2830 69 WVAERVLQGIR--LKSATAING 88 (214)
T ss_pred HHHHHHHhhcc--ccceeeecC
Confidence 99999988765 666676653
No 322
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=35.48 E-value=79 Score=24.31 Aligned_cols=45 Identities=16% Similarity=0.136 Sum_probs=25.7
Q ss_pred CEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHH
Q 021382 55 FRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTA 110 (313)
Q Consensus 55 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia 110 (313)
-.||+.|-+|- .++-.++|+.|.+..+. |-+=+.+||-+.|=.=.
T Consensus 66 ~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~~ 110 (153)
T TIGR00246 66 AHVVTLDIPGK----------PWTTPQLADTLEKWKTD-GRDVTLLIGGPEGLSPT 110 (153)
T ss_pred CeEEEEcCCCC----------cCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCHH
Confidence 46777777762 24555666666665332 22346777777664333
No 323
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=34.60 E-value=82 Score=24.28 Aligned_cols=44 Identities=23% Similarity=0.274 Sum_probs=29.3
Q ss_pred CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC-CeEEEEEeChhH
Q 021382 53 AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL-AKVFLVAKDFGA 107 (313)
Q Consensus 53 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~-~~~~lvGhS~Gg 107 (313)
.+-.+|+.|-.|- .++-.++|+-|.+.... |. +=+.+||-|.|=
T Consensus 66 ~~~~~i~Ld~~Gk----------~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 66 PNDYVILLDERGK----------QLSSEEFAKKLERWMNQ-GKSDIVFIIGGADGL 110 (155)
T ss_dssp TTSEEEEE-TTSE----------E--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB-
T ss_pred CCCEEEEEcCCCc----------cCChHHHHHHHHHHHhc-CCceEEEEEecCCCC
Confidence 4678999998873 45677888888877664 43 348899999983
No 324
>COG3621 Patatin [General function prediction only]
Probab=34.54 E-value=59 Score=28.44 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhCCCe----EEE-EEeChhHHHHHHHHHhccc
Q 021382 81 DMVDDLLAILDHLGLAK----VFL-VAKDFGALTAYMFAIQHQE 119 (313)
Q Consensus 81 ~~~~di~~~~~~l~~~~----~~l-vGhS~Gg~ia~~~a~~~p~ 119 (313)
.+..++..+|++...++ +.+ -|.|.||.+++.+|+-.+.
T Consensus 22 ~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks~ 65 (394)
T COG3621 22 AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKSP 65 (394)
T ss_pred HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCCC
Confidence 56667778888854333 444 5899999999999986543
No 325
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=34.43 E-value=53 Score=25.20 Aligned_cols=32 Identities=25% Similarity=0.205 Sum_probs=23.7
Q ss_pred CCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEe
Q 021382 26 DAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIA 59 (313)
Q Consensus 26 ~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~ 59 (313)
..+|+||.+|.|..+ +..++..|.+.|.+++.
T Consensus 40 ~~~pLVCt~G~p~~A--~~~LL~~L~~~g~~l~y 71 (152)
T PF09664_consen 40 SCPPLVCTSGQPSAA--ARRLLDRLAAAGARLYY 71 (152)
T ss_pred CCCeEEEcCCcHHHH--HHHHHHHHHhCCCEEEE
Confidence 367999999999874 34577778777776554
No 326
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=33.86 E-value=49 Score=32.59 Aligned_cols=24 Identities=13% Similarity=0.241 Sum_probs=20.4
Q ss_pred HhCCCeEEEEEeChhHHHHHHHHH
Q 021382 92 HLGLAKVFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 92 ~l~~~~~~lvGhS~Gg~ia~~~a~ 115 (313)
..++.-=+++|.|+||.++..+|+
T Consensus 62 ~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 62 RLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred ccCCCCceEEeeCHHHHHHHHHHc
Confidence 346666799999999999999997
No 327
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.55 E-value=68 Score=27.00 Aligned_cols=28 Identities=14% Similarity=0.231 Sum_probs=21.6
Q ss_pred eEEEEEeChhHHHHHHHHHhcc-ccccee
Q 021382 97 KVFLVAKDFGALTAYMFAIQHQ-ERVSGV 124 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~~a~~~p-~~v~~l 124 (313)
.-.++|.|.|+.++..|+...+ +++..+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~~~~~~~~ 61 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLPLDQILQI 61 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCCHHHHHHH
Confidence 3469999999999999998765 444443
No 328
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=33.55 E-value=48 Score=28.90 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=19.2
Q ss_pred CCCeEEEEEeChhHHHHHHHHH
Q 021382 94 GLAKVFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 94 ~~~~~~lvGhS~Gg~ia~~~a~ 115 (313)
+.++..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4778899999999999988776
No 329
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=33.00 E-value=3.8e+02 Score=24.46 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=26.7
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCC
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYG 66 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G 66 (313)
..+-|++||.|.... ...++..+.+.|..|++-|+..++
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEeccccc
Confidence 467999999987643 122333444668999999887654
No 330
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=32.58 E-value=48 Score=28.91 Aligned_cols=34 Identities=15% Similarity=0.323 Sum_probs=27.5
Q ss_pred cccCCCceEEEeCCCCCCccccChhHHHHHHHHH
Q 021382 275 KDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTF 308 (313)
Q Consensus 275 ~~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~f 308 (313)
.+...|..+..+..+||+++.++|+.....++.+
T Consensus 377 ~ktyknl~f~wilraghmvp~Dnp~~a~hmlr~v 410 (414)
T KOG1283|consen 377 EKTYKNLSFFWILRAGHMVPADNPAAASHMLRHV 410 (414)
T ss_pred hhhhccceeEEeecccCcccCCCHHHHhhheeec
Confidence 3455688889999999999999999887666544
No 331
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.51 E-value=39 Score=29.95 Aligned_cols=19 Identities=21% Similarity=0.308 Sum_probs=16.8
Q ss_pred EEEEeChhHHHHHHHHHhc
Q 021382 99 FLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 99 ~lvGhS~Gg~ia~~~a~~~ 117 (313)
.+.|.|.||.||..++..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 7899999999999998743
No 332
>PRK09019 translation initiation factor Sui1; Validated
Probab=31.48 E-value=2e+02 Score=20.69 Aligned_cols=75 Identities=17% Similarity=0.155 Sum_probs=48.6
Q ss_pred EEEEEEecCCCCCCcEEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 021382 14 LNLHIAEAGADADAHVVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHL 93 (313)
Q Consensus 14 ~~i~~~~~g~~~~~~~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l 93 (313)
++|+....|. .+..|-+|-|++........++..|... -|+|.|-... .--=.-+..+.+.+++...
T Consensus 33 vri~~~r~gR--kGK~VTiI~Gl~~~~~dlk~l~K~lKkk---------~gcGGtvk~~--~IelQGD~r~~v~~~L~~~ 99 (108)
T PRK09019 33 VRIQRQTSGR--KGKGVCLITGLDLDDAELKKLAAELKKK---------CGCGGAVKDG--VIEIQGDKRDLLKSLLEAK 99 (108)
T ss_pred EEEEEecCCC--CCCeEEEEeCCcCCHHHHHHHHHHHHHH---------hcCCCeEEcC--EEEEcCcHHHHHHHHHHHC
Confidence 3555555553 3668999999997776777777777653 5788886431 1111125677788888888
Q ss_pred CCCeEEEEE
Q 021382 94 GLAKVFLVA 102 (313)
Q Consensus 94 ~~~~~~lvG 102 (313)
|. ++.++|
T Consensus 100 Gf-~~k~~g 107 (108)
T PRK09019 100 GM-KVKLAG 107 (108)
T ss_pred CC-eEEecc
Confidence 87 444544
No 333
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=31.46 E-value=1.4e+02 Score=23.03 Aligned_cols=47 Identities=28% Similarity=0.271 Sum_probs=29.5
Q ss_pred CCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHH
Q 021382 54 GFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTA 110 (313)
Q Consensus 54 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia 110 (313)
+-.+|+.|-+|- ..+-.++|+.+.+..+.-.-+=+.+||-+.|=.-.
T Consensus 67 ~~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~~ 113 (157)
T PRK00103 67 GARVIALDERGK----------QLSSEEFAQELERWRDDGRSDVAFVIGGADGLSPA 113 (157)
T ss_pred CCEEEEEcCCCC----------cCCHHHHHHHHHHHHhcCCccEEEEEcCccccCHH
Confidence 456899998873 34566777777766332212347888888774333
No 334
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=30.78 E-value=3.6e+02 Score=23.46 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=70.8
Q ss_pred CcEEEEECCCCCchhh-HHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCh
Q 021382 27 AHVVVFLHGFPEIWYS-WRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDF 105 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~-w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~ 105 (313)
.|.|+.+--+.++..+ -+.-.+.|+. ...|+.-|.-.--. .|.....+.+++++|-+.+++..+|-+ +|+++-.-
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp-~~~vyitDW~dAr~--Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLP-YHDVYITDWVDARM--VPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhcc-ccceeEeeccccce--eecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEec
Confidence 3567777777776554 3455567765 46788888765432 233335789999999999999999975 66666543
Q ss_pred -----hHHHHHHHHHhcccccceeeEecCCCC
Q 021382 106 -----GALTAYMFAIQHQERVSGVITLGVPIL 132 (313)
Q Consensus 106 -----Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (313)
=+.+++.-+...|..-.+.+++|.+..
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 345566656677888889999987654
No 335
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=30.41 E-value=2.9e+02 Score=22.16 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=47.5
Q ss_pred HHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhccc--cccee
Q 021382 47 MVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSGV 124 (313)
Q Consensus 47 ~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~l 124 (313)
++.+..+++.+|.+|=+|... .-.+..+++.++++.....+++||=-+..+.-.+.-+..+-+ .+.++
T Consensus 76 l~~~~~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~l 145 (196)
T PF00448_consen 76 LEKFRKKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGL 145 (196)
T ss_dssp HHHHHHTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEE
T ss_pred HHHHhhcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceE
Confidence 344445679999999988542 234667788888888876677777776666666655544422 47888
Q ss_pred eEe
Q 021382 125 ITL 127 (313)
Q Consensus 125 vl~ 127 (313)
|+.
T Consensus 146 IlT 148 (196)
T PF00448_consen 146 ILT 148 (196)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 336
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=30.13 E-value=53 Score=28.97 Aligned_cols=28 Identities=21% Similarity=0.133 Sum_probs=20.0
Q ss_pred HHHHHhCCCe------EEEEEeChhHHHHHHHHH
Q 021382 88 AILDHLGLAK------VFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 88 ~~~~~l~~~~------~~lvGhS~Gg~ia~~~a~ 115 (313)
++++..|+.. -.++|||+|=..|+..+.
T Consensus 110 ~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 110 EKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAG 143 (343)
T ss_pred HHHHhcCCCcccccCCCeeeeccHHHHHHHHHhC
Confidence 4455666433 357999999988888774
No 337
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=30.09 E-value=44 Score=26.64 Aligned_cols=27 Identities=7% Similarity=-0.006 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhCCCeEEEEEeCh
Q 021382 79 FQDMVDDLLAILDHLGLAKVFLVAKDF 105 (313)
Q Consensus 79 ~~~~~~di~~~~~~l~~~~~~lvGhS~ 105 (313)
+..++..+..++++.++....|+|||-
T Consensus 132 ~~aL~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 132 YQALAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHcCCCHHhEEehhh
Confidence 345666777788888886688999963
No 338
>PRK13753 dihydropteroate synthase; Provisional
Probab=29.96 E-value=2.2e+02 Score=24.45 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=33.6
Q ss_pred HHHHCCC--EEEeeCCCCCCCCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHH
Q 021382 49 GVATAGF--RAIAPDCRGYGLSD-PPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMF 113 (313)
Q Consensus 49 ~l~~~~~--~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~ 113 (313)
.+.+.|. .=|.+| ||+|... +.. ..++ ++...+.+|...+| ..+|+|+|-=+++.-.+
T Consensus 159 ~~~~~Gi~~~~IilD-PGiGF~k~k~~---~~n~-~ll~~l~~l~~~~g--~PvLvg~SRKsfig~~~ 219 (279)
T PRK13753 159 ALRRSGVAADRLILD-PGMGFFLSPAP---ETSL-HVLSNLQKLKSALG--LPLLVSVSRKSFLGATV 219 (279)
T ss_pred HHHHcCCChhhEEEe-CCCCCCCCCCh---HHHH-HHHHhHHHHHHhCC--CceEEEccHhHHHHHHc
Confidence 3444554 468899 8999831 111 1111 23344444433344 48999999998887554
No 339
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=29.69 E-value=39 Score=29.24 Aligned_cols=20 Identities=15% Similarity=0.277 Sum_probs=17.1
Q ss_pred CCCcEEEEECCCCCchhhHH
Q 021382 25 ADAHVVVFLHGFPEIWYSWR 44 (313)
Q Consensus 25 ~~~~~ivllHG~~~~~~~w~ 44 (313)
+.+|-++=+|||+|+..+|-
T Consensus 107 p~KPLvLSfHG~tGTGKN~V 126 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYV 126 (344)
T ss_pred CCCCeEEEecCCCCCchhHH
Confidence 45788999999999988873
No 340
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=29.68 E-value=91 Score=23.82 Aligned_cols=26 Identities=27% Similarity=0.300 Sum_probs=20.2
Q ss_pred HHHHhCC--CeEEEEEeChhHHHHHHHH
Q 021382 89 ILDHLGL--AKVFLVAKDFGALTAYMFA 114 (313)
Q Consensus 89 ~~~~l~~--~~~~lvGhS~Gg~ia~~~a 114 (313)
.+++.++ .--++.|.|.|+.++..++
T Consensus 19 ~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 19 ALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3344455 5568889999999999999
No 341
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=29.37 E-value=3.5e+02 Score=22.86 Aligned_cols=72 Identities=14% Similarity=0.215 Sum_probs=45.2
Q ss_pred CcEEEEECCCCCchhhHHHHHHHHHHCCC-EEEeeCCCCCCCCCC-CCCCCCCcHHHHHHHHHHHHHHhCCCeEEE-EEe
Q 021382 27 AHVVVFLHGFPEIWYSWRHQMVGVATAGF-RAIAPDCRGYGLSDP-PAEPEKTSFQDMVDDLLAILDHLGLAKVFL-VAK 103 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~-~vi~~D~~G~G~S~~-~~~~~~~~~~~~~~di~~~~~~l~~~~~~l-vGh 103 (313)
+.||++=-|...+...|...++.+...|- +++... + |-|.. +.......+.. +..+-+..+. ++.+ ..|
T Consensus 132 gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-r--G~s~y~~~~~~~~dl~~----i~~lk~~~~~-pV~~ds~H 203 (260)
T TIGR01361 132 GKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-R--GIRTFEKATRNTLDLSA----VPVLKKETHL-PIIVDPSH 203 (260)
T ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-C--CCCCCCCCCcCCcCHHH----HHHHHHhhCC-CEEEcCCC
Confidence 66899999999999999988888876554 455544 3 44443 22222233332 2223333454 6777 799
Q ss_pred Chh
Q 021382 104 DFG 106 (313)
Q Consensus 104 S~G 106 (313)
|.|
T Consensus 204 s~G 206 (260)
T TIGR01361 204 AAG 206 (260)
T ss_pred CCC
Confidence 988
No 342
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=29.25 E-value=55 Score=27.59 Aligned_cols=62 Identities=18% Similarity=0.267 Sum_probs=37.7
Q ss_pred CCcEEEEeeC------CCcCCCCCCchhhhhcccccccCCCceEEEeCC--CCCCccccChhHHHHHHHHHhh
Q 021382 246 KVPALLILGE------KDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSE--GSHFVQEQSPEEVNQLVLTFLN 310 (313)
Q Consensus 246 ~~P~l~i~G~------~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~--~gH~~~~e~pe~~~~~i~~fl~ 310 (313)
++.+|-|.|. .|..||...+... ...++.....-+-.++.| +.|.-..|.|+ +.+.|.+||=
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl--~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~-V~~~I~~FLw 253 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSL--RYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ-VDKLIIQFLW 253 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTH--HHHCTTTSSEEEEEEEESGGGSCCGGGCCHH-HHHHHHHHHC
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHH--HHHhhcccCceEEEEEECCCCccccCCCCHH-HHHHHHHHhc
Confidence 5679999998 6777654322110 112333334455556655 68988888775 5589999983
No 343
>COG0069 GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
Probab=29.21 E-value=1.8e+02 Score=27.18 Aligned_cols=60 Identities=25% Similarity=0.211 Sum_probs=42.5
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCe--EEEEEeChhHHHHHHHHHhccccc
Q 021382 62 CRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAK--VFLVAKDFGALTAYMFAIQHQERV 121 (313)
Q Consensus 62 ~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~--~~lvGhS~Gg~ia~~~a~~~p~~v 121 (313)
-||-|.=++++..+-|+++++++-|.++-+.-+.++ +-++...-=+.++.-.|-.++|.|
T Consensus 270 ~pG~~~ISP~pHHDiysieDLaqlI~dLk~~~~~~~I~VKlva~~~v~~iaagvakA~AD~I 331 (485)
T COG0069 270 PPGVGLISPPPHHDIYSIEDLAQLIKDLKEANPWAKISVKLVAEHGVGTIAAGVAKAGADVI 331 (485)
T ss_pred CCCCCCcCCCCcccccCHHHHHHHHHHHHhcCCCCeEEEEEecccchHHHHhhhhhccCCEE
Confidence 478887777777678999999998888876656665 455665555666666666666643
No 344
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.72 E-value=87 Score=26.38 Aligned_cols=58 Identities=16% Similarity=0.155 Sum_probs=44.0
Q ss_pred CCcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEE-eCCCCCCccccChhHHHHHHHHHh
Q 021382 246 KVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIR-LSEGSHFVQEQSPEEVNQLVLTFL 309 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~-i~~~gH~~~~e~pe~~~~~i~~fl 309 (313)
.+-+-+.+|..|.++|.+ + ...+++..|..++.. .+++-|..-..+.|..+..+.+.+
T Consensus 242 ~d~l~Fyygt~DgW~p~~----~--~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVPSH----Y--YDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CcEEEEEccCCCCCcchH----H--HHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 467889999999999842 2 235788888755543 377999998888999888887765
No 345
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=28.69 E-value=1.6e+02 Score=26.72 Aligned_cols=55 Identities=15% Similarity=0.122 Sum_probs=32.1
Q ss_pred CEEEEEEec-CCCC-CCcEEEEECCCCCchhh-HHH-HHHHHHHCCCEE--EeeCCCCCCCC
Q 021382 13 GLNLHIAEA-GADA-DAHVVVFLHGFPEIWYS-WRH-QMVGVATAGFRA--IAPDCRGYGLS 68 (313)
Q Consensus 13 g~~i~~~~~-g~~~-~~~~ivllHG~~~~~~~-w~~-~~~~l~~~~~~v--i~~D~~G~G~S 68 (313)
.-++.|+.. .+.+ ....|+++.||+++... +.. ..+.++ +.|.| |.++.-|+|.-
T Consensus 19 ~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA-~~fnvv~I~V~YHCf~~R 79 (403)
T PF11144_consen 19 ESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIA-KKFNVVVISVNYHCFCNR 79 (403)
T ss_pred cceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHH-HhCCEEEEEeeeeheeec
Confidence 345666652 2211 23468888999988763 443 444554 46774 55677777654
No 346
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=28.67 E-value=69 Score=29.29 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=23.1
Q ss_pred CcEEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCCcc
Q 021382 247 VPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQ 294 (313)
Q Consensus 247 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~~~ 294 (313)
--++++.|+.||+.... + .....+....++|++++|+.=
T Consensus 377 tnviFtNG~~DPW~~lg-v--------~~~~~~~~~~~~I~g~~Hc~D 415 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG-V--------TSDSSDSVPAIVIPGGAHCSD 415 (434)
T ss_dssp -SEEEEEETT-CCGGGS-----------S-SSSSEEEEEETT--TTGG
T ss_pred CeEEeeCCCCCCccccc-C--------CCCCCCCcccEEECCCeeecc
Confidence 36999999999986422 1 122344566678999999843
No 347
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=28.20 E-value=88 Score=24.91 Aligned_cols=93 Identities=11% Similarity=-0.021 Sum_probs=56.1
Q ss_pred eeeCCEEEEEEecCCCC-CCcE--EEEECCCCCchhhHHHHHHHHHHCCCEE------EeeCCCCCCCCCCCCCCCCCcH
Q 021382 9 IKVQGLNLHIAEAGADA-DAHV--VVFLHGFPEIWYSWRHQMVGVATAGFRA------IAPDCRGYGLSDPPAEPEKTSF 79 (313)
Q Consensus 9 ~~~~g~~i~~~~~g~~~-~~~~--ivllHG~~~~~~~w~~~~~~l~~~~~~v------i~~D~~G~G~S~~~~~~~~~~~ 79 (313)
+..+|..+.|..+.... .|.+ |-++=||+...+.-.+.+.+|.++++.+ +.++.- .+.
T Consensus 40 ~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN~d-------------d~~ 106 (184)
T TIGR01626 40 IVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIINAD-------------DAI 106 (184)
T ss_pred EEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEECc-------------cch
Confidence 33466778887765421 2443 4445599988888889999998878877 666511 012
Q ss_pred HHHHHHHHHHHHHhCCCe-EEEEEeChhHHHHHHHH
Q 021382 80 QDMVDDLLAILDHLGLAK-VFLVAKDFGALTAYMFA 114 (313)
Q Consensus 80 ~~~~~di~~~~~~l~~~~-~~lvGhS~Gg~ia~~~a 114 (313)
......+.+++++.+.+- +..+.-+-.|.++..+.
T Consensus 107 ~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~g 142 (184)
T TIGR01626 107 VGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAWQ 142 (184)
T ss_pred hhHHHHHHHHHHHhcccCCcceEEECCcchHHHhcC
Confidence 233345677777776542 33344444565555544
No 348
>PRK14974 cell division protein FtsY; Provisional
Probab=28.06 E-value=4.3e+02 Score=23.41 Aligned_cols=66 Identities=20% Similarity=0.204 Sum_probs=45.4
Q ss_pred HCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcc--cccceeeEe
Q 021382 52 TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQ--ERVSGVITL 127 (313)
Q Consensus 52 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~ 127 (313)
..++.+|.+|-.|...+ -..+.+.+..+.+..+.+..++|.-+.-|.-+..-+..+. -.+.++|+.
T Consensus 220 ~~~~DvVLIDTaGr~~~----------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 220 ARGIDVVLIDTAGRMHT----------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred hCCCCEEEEECCCccCC----------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 45788999998875442 2255666777777777777888888877776666565543 356777764
No 349
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=28.00 E-value=3.8e+02 Score=22.82 Aligned_cols=26 Identities=27% Similarity=0.282 Sum_probs=20.9
Q ss_pred HHh-CCCeEEEEEeChhHHHHHHHHHh
Q 021382 91 DHL-GLAKVFLVAKDFGALTAYMFAIQ 116 (313)
Q Consensus 91 ~~l-~~~~~~lvGhS~Gg~ia~~~a~~ 116 (313)
+.. ..+++.++|.|-|+.+|-.+|..
T Consensus 86 ~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 86 KNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred hccCCcceEEEEecCccHHHHHHHHHH
Confidence 443 35679999999999999998854
No 350
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=27.92 E-value=60 Score=37.09 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCeEEEEEeChhHHHHHHHH
Q 021382 86 LLAILDHLGLAKVFLVAKDFGALTAYMFA 114 (313)
Q Consensus 86 i~~~~~~l~~~~~~lvGhS~Gg~ia~~~a 114 (313)
+.++++.+|+++-.++|||+|=..|+..|
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 34567888999999999999998887765
No 351
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=27.68 E-value=53 Score=27.74 Aligned_cols=46 Identities=17% Similarity=0.098 Sum_probs=24.6
Q ss_pred CccCCcEEEEeeCCCcCCCCCCchhhhhcccccccC-CCceEEEeCCCCCC
Q 021382 243 LTVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFV-PNLEIIRLSEGSHF 292 (313)
Q Consensus 243 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~ 292 (313)
.++++|+|++.|-.|..+. .+..+.+. .+.+.- .+.++++-| .+|+
T Consensus 225 ~~i~vP~l~v~Gw~D~~~~-~~~~~~~~--~l~~~~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 225 DKIDVPVLIVGGWYDTLFL-RGALRAYE--ALRAPGSKPQRLIIGP-WTHG 271 (272)
T ss_dssp GG--SEEEEEEETTCSSTS-HHHHHHHH--HHCTTSTC-EEEEEES-ESTT
T ss_pred hhCCCCEEEecccCCcccc-hHHHHHHH--HhhcCCCCCCEEEEeC-CCCC
Confidence 4789999999999995554 33222221 233222 233665554 5774
No 352
>COG3910 Predicted ATPase [General function prediction only]
Probab=27.37 E-value=1.3e+02 Score=24.38 Aligned_cols=47 Identities=26% Similarity=0.370 Sum_probs=34.2
Q ss_pred EEEEeeCCCcCCCCCCchhhhhcccccccCCCceEEEeCCCCCC-ccccChhHHHHHHHHHhhh
Q 021382 249 ALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHF-VQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 249 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~~~gH~-~~~e~pe~~~~~i~~fl~~ 311 (313)
..+|-.++.|+. |+ +|++++..|+.+||- .-.|+.|.+ +.+++|+++
T Consensus 179 aQ~IiATHSPiL-------------lA--iP~A~I~~~~~~g~~~~~fe~te~~-r~lR~Fl~d 226 (233)
T COG3910 179 AQIIIATHSPIL-------------LA--IPGAEIYEISESGIEERDFEETEHF-RALRDFLND 226 (233)
T ss_pred CeEEEEecChhh-------------ee--CCCcEEEEEecCCccccchHHHHHH-HHHHHHHhC
Confidence 556777777764 22 799999999999984 445555555 788888865
No 353
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=27.30 E-value=95 Score=26.07 Aligned_cols=21 Identities=24% Similarity=0.099 Sum_probs=18.3
Q ss_pred EEEEEeChhHHHHHHHHHhcc
Q 021382 98 VFLVAKDFGALTAYMFAIQHQ 118 (313)
Q Consensus 98 ~~lvGhS~Gg~ia~~~a~~~p 118 (313)
-.++|-|.|+.++..|+...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 568999999999999998764
No 354
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=27.01 E-value=1.2e+02 Score=23.72 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=36.8
Q ss_pred ccCCcEEEEeeCCCcCC-CCCCchhhhhccccccc-CCCceEEEeCCCCCCcc-ccChhHHHHHHHHH
Q 021382 244 TVKVPALLILGEKDYFL-KFPGIEDYIRSGKVKDF-VPNLEIIRLSEGSHFVQ-EQSPEEVNQLVLTF 308 (313)
Q Consensus 244 ~i~~P~l~i~G~~D~~~-~~~~~~~~~~~~~~~~~-~p~~~~~~i~~~gH~~~-~e~pe~~~~~i~~f 308 (313)
.+.+|+.++.+++|... +..... ...+. ....+++.++ ++|+-+ .+++..+.+.|..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~------~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 151 PVAAPTLLVRASEPLAEWPDEDPD------GWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCEEEEeccCCCCCCCCCCcc------cccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 57899999999998654 111111 12222 2457888888 578665 55677777776655
No 355
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.49 E-value=1.2e+02 Score=26.10 Aligned_cols=50 Identities=22% Similarity=0.344 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCC---CeEEEEEeChhHHHHHHHHHh---cccccceeeEecCCC
Q 021382 82 MVDDLLAILDHLGL---AKVFLVAKDFGALTAYMFAIQ---HQERVSGVITLGVPI 131 (313)
Q Consensus 82 ~~~di~~~~~~l~~---~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 131 (313)
+.+.|.+-++++.- -|++|.|-|+|++-+...-.. .-+++.+.++.|++.
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 44444445555532 379999999999877765332 235788888888653
No 356
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=26.26 E-value=91 Score=29.71 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=43.1
Q ss_pred cEEEEECCCCC------chhhHHHHHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHH---HHHHHHHHHhC--CC
Q 021382 28 HVVVFLHGFPE------IWYSWRHQMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMV---DDLLAILDHLG--LA 96 (313)
Q Consensus 28 ~~ivllHG~~~------~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~---~di~~~~~~l~--~~ 96 (313)
..|+-+||.+- +++.|.+.+.. +.+..||.+|.-=- |+.+-.--+++.- -.+++=-+.+| .+
T Consensus 397 sli~HcHGGGfVAqsSkSHE~YLr~Wa~--aL~cPiiSVdYSLA-----PEaPFPRaleEv~fAYcW~inn~allG~TgE 469 (880)
T KOG4388|consen 397 SLIVHCHGGGFVAQSSKSHEPYLRSWAQ--ALGCPIISVDYSLA-----PEAPFPRALEEVFFAYCWAINNCALLGSTGE 469 (880)
T ss_pred eEEEEecCCceeeeccccccHHHHHHHH--HhCCCeEEeeeccC-----CCCCCCcHHHHHHHHHHHHhcCHHHhCcccc
Confidence 36777888752 33445554432 34789999996432 2222111122110 01111123344 36
Q ss_pred eEEEEEeChhHHHHHHHHH
Q 021382 97 KVFLVAKDFGALTAYMFAI 115 (313)
Q Consensus 97 ~~~lvGhS~Gg~ia~~~a~ 115 (313)
+++++|-|-||.+..-.|+
T Consensus 470 riv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred eEEEeccCCCcceeehhHH
Confidence 8999999999976554443
No 357
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=26.11 E-value=48 Score=26.73 Aligned_cols=22 Identities=14% Similarity=0.220 Sum_probs=17.1
Q ss_pred CCcEEEEeeCCCcCCCCCCchh
Q 021382 246 KVPALLILGEKDYFLKFPGIED 267 (313)
Q Consensus 246 ~~P~l~i~G~~D~~~~~~~~~~ 267 (313)
..|+++++|++|.++++....+
T Consensus 168 ~p~~~i~hG~~D~vVp~~~~~~ 189 (212)
T TIGR01840 168 TPIMSVVHGDADYTVLPGNADE 189 (212)
T ss_pred CCeEEEEEcCCCceeCcchHHH
Confidence 4457899999999998765543
No 358
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.77 E-value=59 Score=27.90 Aligned_cols=19 Identities=21% Similarity=0.298 Sum_probs=17.3
Q ss_pred EEEEeChhHHHHHHHHHhc
Q 021382 99 FLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 99 ~lvGhS~Gg~ia~~~a~~~ 117 (313)
.++|.|.||.+|..++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 8899999999999998765
No 359
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=25.65 E-value=1.8e+02 Score=23.20 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=25.9
Q ss_pred CcEEEEECCCCCchhh-HH-HHHHHHHHCCCEEEeeC
Q 021382 27 AHVVVFLHGFPEIWYS-WR-HQMVGVATAGFRAIAPD 61 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~-w~-~~~~~l~~~~~~vi~~D 61 (313)
++.+|++-|..++..+ -. .+.+.|.+.|++++..|
T Consensus 22 ~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 22 KGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 5789999999887543 22 23356667899999998
No 360
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=25.59 E-value=1.5e+02 Score=22.33 Aligned_cols=43 Identities=16% Similarity=0.087 Sum_probs=27.4
Q ss_pred EEEEECCCCCchhhH--HHHHHHHHHCCCEEEeeCCCCCCCCCCC
Q 021382 29 VVVFLHGFPEIWYSW--RHQMVGVATAGFRAIAPDCRGYGLSDPP 71 (313)
Q Consensus 29 ~ivllHG~~~~~~~w--~~~~~~l~~~~~~vi~~D~~G~G~S~~~ 71 (313)
|+|.+-|...+..+. +.++..|..+|++|.++=.-+||+.+..
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d 45 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEID 45 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccC
Confidence 578888887665443 4566778778999887766778776543
No 361
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.43 E-value=3e+02 Score=24.53 Aligned_cols=85 Identities=9% Similarity=-0.028 Sum_probs=55.9
Q ss_pred cEEEEECCCCCchhhHHH-HHHHHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC--CeEEEEEeC
Q 021382 28 HVVVFLHGFPEIWYSWRH-QMVGVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGL--AKVFLVAKD 104 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~-~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~--~~~~lvGhS 104 (313)
.+||++=||.++.+.|.. ......++|+.++.+-.|-+=..- +......++.....-+.+++...+. .+.++--.|
T Consensus 39 k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~-~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 39 KPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFL-SASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred ccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccc-ccccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 379999999999887643 333344578999999988664332 2222234455555677777777763 356666889
Q ss_pred hhHHHHHHH
Q 021382 105 FGALTAYMF 113 (313)
Q Consensus 105 ~Gg~ia~~~ 113 (313)
|||...+..
T Consensus 118 ~ng~~~~~s 126 (350)
T KOG2521|consen 118 GNGVRLMYS 126 (350)
T ss_pred CCceeehHH
Confidence 999665543
No 362
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=25.26 E-value=63 Score=24.97 Aligned_cols=24 Identities=25% Similarity=0.254 Sum_probs=18.5
Q ss_pred CCCeEEEEEeChhHHHHHHHHHhc
Q 021382 94 GLAKVFLVAKDFGALTAYMFAIQH 117 (313)
Q Consensus 94 ~~~~~~lvGhS~Gg~ia~~~a~~~ 117 (313)
+..--.+.|-|.||.+|..++...
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC-
T ss_pred CCCccEEEEcChhhhhHHHHHhCC
Confidence 344468999999999998888763
No 363
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=25.19 E-value=94 Score=21.51 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=15.8
Q ss_pred CEEEEEEecCCCCCCcEEEEECCCCC
Q 021382 13 GLNLHIAEAGADADAHVVVFLHGFPE 38 (313)
Q Consensus 13 g~~i~~~~~g~~~~~~~ivllHG~~~ 38 (313)
+.++.|...+ +..+|++|||-=
T Consensus 57 ~yRiif~~~~----~~~vvll~gf~K 78 (95)
T TIGR02683 57 GYRVYFTQRG----KVIILLLCGGDK 78 (95)
T ss_pred CEEEEEEEEC----CEEEEEEeCEec
Confidence 6788776654 347889999853
No 364
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=25.19 E-value=1.1e+02 Score=29.86 Aligned_cols=77 Identities=13% Similarity=0.181 Sum_probs=47.6
Q ss_pred CCcEEEEECCCCC----------chhhHHHHHHHHHHCCCEEEeeCCCC---CCCCCCCCCCC----CCcHHHHHHHHHH
Q 021382 26 DAHVVVFLHGFPE----------IWYSWRHQMVGVATAGFRAIAPDCRG---YGLSDPPAEPE----KTSFQDMVDDLLA 88 (313)
Q Consensus 26 ~~~~ivllHG~~~----------~~~~w~~~~~~l~~~~~~vi~~D~~G---~G~S~~~~~~~----~~~~~~~~~di~~ 88 (313)
++.+||+.|.... +...|+.++..|.+.||++|..|..= .|....|...- +.++.+....+.-
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~P 126 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFP 126 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHH
Confidence 4679999998743 23469999999988899999998431 12222221111 1122233456778
Q ss_pred HHHHhCCCe-EEEEE
Q 021382 89 ILDHLGLAK-VFLVA 102 (313)
Q Consensus 89 ~~~~l~~~~-~~lvG 102 (313)
++++.++.- +.++|
T Consensus 127 ILkkygvpATfFlvg 141 (671)
T PRK14582 127 ILQAFQWPAVWAPVG 141 (671)
T ss_pred HHHHcCCCEEEEEec
Confidence 899999864 33444
No 365
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.06 E-value=1.4e+02 Score=26.01 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCC----CeEEEEEeC--hhHHHHHHHHHh
Q 021382 83 VDDLLAILDHLGL----AKVFLVAKD--FGALTAYMFAIQ 116 (313)
Q Consensus 83 ~~di~~~~~~l~~----~~~~lvGhS--~Gg~ia~~~a~~ 116 (313)
+.-+.++++..++ +++.++|.| ||..+|..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4457778887754 589999997 999999999765
No 366
>PRK07206 hypothetical protein; Provisional
Probab=24.51 E-value=2.7e+02 Score=25.19 Aligned_cols=80 Identities=20% Similarity=0.179 Sum_probs=44.8
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHCCCEEEeeCCCCCCCC----CCCCCC--CCCcHHHHHHHHHHHHHHhCCCeEEEEE
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPDCRGYGLS----DPPAEP--EKTSFQDMVDDLLAILDHLGLAKVFLVA 102 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D~~G~G~S----~~~~~~--~~~~~~~~~~di~~~~~~l~~~~~~lvG 102 (313)
.|++|-|+... ..+++.+...|++++++|-.+.-.. ...... ..... ...+.+.++++..++ ..++.|
T Consensus 4 ~~liv~~~~~~----~~~~~a~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~l~~~~~~~~~-d~vi~~ 77 (416)
T PRK07206 4 KVVIVDPFSSG----KFLAPAFKKRGIEPIAVTSSCLLDPYYYASFDTSDFIEVIIN-GDIDDLVEFLRKLGP-EAIIAG 77 (416)
T ss_pred eEEEEcCCchH----HHHHHHHHHcCCeEEEEEcCCCCchhhhcccCcccchhhhcC-CCHHHHHHHHHHcCC-CEEEEC
Confidence 57888886443 2456677778999998885432100 000000 00000 124567777777776 466678
Q ss_pred eChhHHHHHHHH
Q 021382 103 KDFGALTAYMFA 114 (313)
Q Consensus 103 hS~Gg~ia~~~a 114 (313)
...+-.++..++
T Consensus 78 ~e~~~~~~a~l~ 89 (416)
T PRK07206 78 AESGVELADRLA 89 (416)
T ss_pred CCccHHHHHHHH
Confidence 776665555544
No 367
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=24.31 E-value=1.3e+02 Score=19.02 Aligned_cols=35 Identities=26% Similarity=0.441 Sum_probs=26.6
Q ss_pred ccCCCceEEEeCCCCCCccccChhHHHHHHHHHhhh
Q 021382 276 DFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNK 311 (313)
Q Consensus 276 ~~~p~~~~~~i~~~gH~~~~e~pe~~~~~i~~fl~~ 311 (313)
+..|+..+.. -++-+++-.|.++++.+.|.+|-.+
T Consensus 23 e~~PDTvItL-~~G~k~vV~Es~~eVi~ki~~y~~~ 57 (60)
T PF06289_consen 23 EETPDTVITL-TNGKKYVVKESVEEVIEKIIEYRRK 57 (60)
T ss_pred EEcCCeEEEE-eCCCEEEEECCHHHHHHHHHHHHHh
Confidence 4568754444 4567789999999999999998754
No 368
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=23.71 E-value=3.4e+02 Score=21.49 Aligned_cols=61 Identities=10% Similarity=0.174 Sum_probs=35.9
Q ss_pred CcEEEEECCCCCch---hhHHHHHHHHHHCCCEEEeeCCCCC---CCCCCCCCCCCCcHHHHHHHHHHHHH
Q 021382 27 AHVVVFLHGFPEIW---YSWRHQMVGVATAGFRAIAPDCRGY---GLSDPPAEPEKTSFQDMVDDLLAILD 91 (313)
Q Consensus 27 ~~~ivllHG~~~~~---~~w~~~~~~l~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~di~~~~~ 91 (313)
+.|||++.-+.... ..+++.+..|.+.|+.|+-|. +|+ |..... ..-+++++++.+.+++.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g---~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYG---ALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCC---CCCCHHHHHHHHHHHhc
Confidence 44677777543321 134556777878888888887 666 443321 22356677666665543
No 369
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=23.47 E-value=1.8e+02 Score=23.20 Aligned_cols=39 Identities=15% Similarity=0.142 Sum_probs=22.2
Q ss_pred EEECCCCCchhh-HH-HHHHHHHH----CCCEEEeeCCCCCCCCC
Q 021382 31 VFLHGFPEIWYS-WR-HQMVGVAT----AGFRAIAPDCRGYGLSD 69 (313)
Q Consensus 31 vllHG~~~~~~~-w~-~~~~~l~~----~~~~vi~~D~~G~G~S~ 69 (313)
+++-|-+++..+ +. .++..++. .+.+++.+|..|.+.+.
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~ 85 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAP 85 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGG
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccch
Confidence 446677666544 32 34445544 57899999999775543
No 370
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=23.46 E-value=1e+02 Score=26.16 Aligned_cols=44 Identities=20% Similarity=0.118 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhcccccceeeE
Q 021382 83 VDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQERVSGVIT 126 (313)
Q Consensus 83 ~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 126 (313)
|.-+.+|++...+.==-++|.|+|+.-...|....+.+.++++.
T Consensus 27 AGVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 27 AGVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 55677788655443345789999999999999999998888874
No 371
>COG0860 AmiC N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=23.38 E-value=1.1e+02 Score=25.39 Aligned_cols=44 Identities=34% Similarity=0.379 Sum_probs=27.9
Q ss_pred CEEEeeCCCCCCCCCCCCCC-----CCCcHHHHHHHHHHHHHHhCCCeEEE
Q 021382 55 FRAIAPDCRGYGLSDPPAEP-----EKTSFQDMVDDLLAILDHLGLAKVFL 100 (313)
Q Consensus 55 ~~vi~~D~~G~G~S~~~~~~-----~~~~~~~~~~di~~~~~~l~~~~~~l 100 (313)
-.+|.+| ||||..++..-. +..=.-+.+..+.+.+++.|. ++++
T Consensus 42 ~~~I~ID-pGHGG~D~GAig~~g~~EKdvtL~ia~~l~~~L~~~g~-~v~m 90 (231)
T COG0860 42 GKTIVID-PGHGGKDPGAIGPNGTLEKDVTLDIAKRLRDLLRAEGV-EVVL 90 (231)
T ss_pred CeEEEEc-CCCCCCCCCccCCCCCccceeHHHHHHHHHHHHHhCCC-EEEE
Confidence 5799999 999998764221 111233566777777887773 4443
No 372
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=22.99 E-value=99 Score=18.59 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=22.4
Q ss_pred CCcHHHHHHHHHHHHHHhCCCeEEEEE
Q 021382 76 KTSFQDMVDDLLAILDHLGLAKVFLVA 102 (313)
Q Consensus 76 ~~~~~~~~~di~~~~~~l~~~~~~lvG 102 (313)
....+.+..|+...|..+.|..+.++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 345678889999999999998888887
No 373
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=22.57 E-value=60 Score=19.03 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=23.0
Q ss_pred CCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 021382 53 AGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDH 92 (313)
Q Consensus 53 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~ 92 (313)
.+|.+.+||+||+-- ...|+++....+.+.+..
T Consensus 12 ~~y~~~~pdlpg~~t-------~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFT-------QGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSEEEEETTCCTCEE-------EESSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhh-------cCCCHHHHHHHHHHHHHH
Confidence 479999999998741 234677777766665543
No 374
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=22.11 E-value=3.7e+02 Score=20.67 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=46.6
Q ss_pred cEEEEECCCCCchhhHHHHHHHHHHCCC-EEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeC-h
Q 021382 28 HVVVFLHGFPEIWYSWRHQMVGVATAGF-RAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKD-F 105 (313)
Q Consensus 28 ~~ivllHG~~~~~~~w~~~~~~l~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS-~ 105 (313)
...+++-|-.... ....+...|. +|+.+|.+.. ..|+...+++-+.+++++.+. .++|+|+| .
T Consensus 30 ~v~~v~~G~~~~~-----~~~~~~~~Gad~v~~~~~~~~---------~~~~~~~~a~al~~~i~~~~p-~~Vl~~~t~~ 94 (168)
T cd01715 30 EVTALVIGSGAEA-----VAAALKAYGADKVLVAEDPAL---------AHYLAEPYAPALVALAKKEKP-SHILAGATSF 94 (168)
T ss_pred CEEEEEECCChHH-----HHHHHHhcCCCEEEEecChhh---------cccChHHHHHHHHHHHHhcCC-CEEEECCCcc
Confidence 4566666654332 1333333344 6777764432 235677888889999988774 67777765 5
Q ss_pred hHHHHHHHHHhc
Q 021382 106 GALTAYMFAIQH 117 (313)
Q Consensus 106 Gg~ia~~~a~~~ 117 (313)
|.-++.++|++-
T Consensus 95 g~~la~rlAa~L 106 (168)
T cd01715 95 GKDLAPRVAAKL 106 (168)
T ss_pred ccchHHHHHHHh
Confidence 667777777653
No 375
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=22.02 E-value=3.5e+02 Score=26.19 Aligned_cols=43 Identities=14% Similarity=0.122 Sum_probs=23.7
Q ss_pred CcEEEEECCCCCchhh---HHHHHHHHHHCCCEEEeeCC--CCCCCCC
Q 021382 27 AHVVVFLHGFPEIWYS---WRHQMVGVATAGFRAIAPDC--RGYGLSD 69 (313)
Q Consensus 27 ~~~ivllHG~~~~~~~---w~~~~~~l~~~~~~vi~~D~--~G~G~S~ 69 (313)
..|+++|||-.+.--. =..+...|...|..|-..=+ -|||.+.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 4689999999654211 12234555555655444444 5566553
No 376
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=21.99 E-value=5.3e+02 Score=23.78 Aligned_cols=68 Identities=16% Similarity=0.202 Sum_probs=46.7
Q ss_pred HHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhccc--ccceeeEe
Q 021382 50 VATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVITL 127 (313)
Q Consensus 50 l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~ 127 (313)
+...+|.+|.+|-+|.-. .-..+.+.+..+.+......+++|--++-|.-+...|..+-+ .+.++|+.
T Consensus 178 ~~~~~~DvViIDTaGr~~----------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 178 FKKENFDIIIVDTSGRHK----------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred HHhCCCCEEEEECCCCCc----------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 334579999999998422 122466677777777777778888888877666666665533 47888874
No 377
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=21.92 E-value=2.2e+02 Score=24.45 Aligned_cols=49 Identities=24% Similarity=0.320 Sum_probs=33.9
Q ss_pred cHHH-HHHHHHHHHHHhCCC---eEEEEEeChhHHHHHHHHHhcccccceeeEe
Q 021382 78 SFQD-MVDDLLAILDHLGLA---KVFLVAKDFGALTAYMFAIQHQERVSGVITL 127 (313)
Q Consensus 78 ~~~~-~~~di~~~~~~l~~~---~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 127 (313)
|+++ +..-+..+.+.++++ .+-=+|-.|||+. ..+|.+|-.+|.|+.+.
T Consensus 52 tL~eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 52 TLEEAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLS 104 (283)
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCC
Confidence 4443 445566788888776 4777999999864 45566666778887753
No 378
>PHA02114 hypothetical protein
Probab=20.92 E-value=1.5e+02 Score=20.81 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=25.5
Q ss_pred EEEEECCCCCchhhHHHHHHHHHHCCCEEEeeC
Q 021382 29 VVVFLHGFPEIWYSWRHQMVGVATAGFRAIAPD 61 (313)
Q Consensus 29 ~ivllHG~~~~~~~w~~~~~~l~~~~~~vi~~D 61 (313)
+||+=--+..+..-|-.++.+|.+.||.|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 567666677777788888888888889988754
No 379
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=20.70 E-value=2.1e+02 Score=18.65 Aligned_cols=33 Identities=15% Similarity=0.379 Sum_probs=22.1
Q ss_pred HCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 021382 52 TAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILD 91 (313)
Q Consensus 52 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~ 91 (313)
..+|-+..||+||+=. ...|+++..+.+.+.++
T Consensus 13 dg~y~~~~Pdlpgc~s-------~G~T~eea~~n~~eai~ 45 (73)
T COG1598 13 DGGYVASVPDLPGCHS-------QGETLEEALQNAKEAIE 45 (73)
T ss_pred CCCEEEEeCCCCCccc-------cCCCHHHHHHHHHHHHH
Confidence 3468899999999832 23466666666655544
No 380
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=20.32 E-value=6.5e+02 Score=23.17 Aligned_cols=69 Identities=23% Similarity=0.319 Sum_probs=45.1
Q ss_pred HHHHCCCEEEeeCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeChhHHHHHHHHHhccc--ccceeeE
Q 021382 49 GVATAGFRAIAPDCRGYGLSDPPAEPEKTSFQDMVDDLLAILDHLGLAKVFLVAKDFGALTAYMFAIQHQE--RVSGVIT 126 (313)
Q Consensus 49 ~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 126 (313)
.+...+|.+|.+|-+|....+ ..+.+.+..+.+.+..+.+++|--++-|.-+...|..+-+ .+.++|+
T Consensus 177 ~~~~~~~DvVIIDTaGr~~~d----------~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIl 246 (428)
T TIGR00959 177 YAKENGFDVVIVDTAGRLQID----------EELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVVL 246 (428)
T ss_pred HHHhcCCCEEEEeCCCccccC----------HHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEEEE
Confidence 333457999999999864321 1355666666666666777888777766666666655432 5667776
Q ss_pred e
Q 021382 127 L 127 (313)
Q Consensus 127 ~ 127 (313)
.
T Consensus 247 T 247 (428)
T TIGR00959 247 T 247 (428)
T ss_pred e
Confidence 4
No 381
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.16 E-value=1.6e+02 Score=22.22 Aligned_cols=30 Identities=10% Similarity=0.265 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEEeChhHHHHH
Q 021382 82 MVDDLLAILDHLGLAKVFLVAKDFGALTAY 111 (313)
Q Consensus 82 ~~~di~~~~~~l~~~~~~lvGhS~Gg~ia~ 111 (313)
....+.--+..++.+.++++||+-=|++..
T Consensus 42 ~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 42 AIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred HHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 445566667888999999999986555443
Done!