BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021383
(313 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZM3|PPCS2_ARATH Phosphopantothenate--cysteine ligase 2 OS=Arabidopsis thaliana
GN=PPCS2 PE=2 SV=2
Length = 309
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/309 (66%), Positives = 250/309 (80%)
Query: 5 LNSEIESFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRY 64
+ EI SFF+S+PP + I + L EFI LNSS G RR+ CVTSGGTTVPLEQRCVRY
Sbjct: 1 MEDEISSFFESSPPQKNMEEILENLNEFIKLNSSSQGGRRIVCVTSGGTTVPLEQRCVRY 60
Query: 65 IDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVC 124
IDNFSSG+RGAASTE+ +K GYAVIFLYRRGTC+PYC SLPDD FLECFE ++++ +QV
Sbjct: 61 IDNFSSGNRGAASTENFVKAGYAVIFLYRRGTCQPYCRSLPDDPFLECFEFSDKTNIQVH 120
Query: 125 QPYSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAV 184
+ EAVK A+ D AVA G LLKLPF+TI+EYLQML++IA + + +GPCSMFYLAAAV
Sbjct: 121 TSHLEAVKMAVMDQQTAVAEGSLLKLPFSTIYEYLQMLRLIAEALKDVGPCSMFYLAAAV 180
Query: 185 SDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLE 244
SDFYVPWKSM EHKI+SGSGPLD++L QVPKMLSVLR WAP AFCISFKLETD++IL+E
Sbjct: 181 SDFYVPWKSMTEHKIESGSGPLDIRLAQVPKMLSVLRSNWAPKAFCISFKLETDSKILME 240
Query: 245 KADMARKKYGMHAVVANELLSRKEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLVDRH 304
KA A +KY +HAVVANEL +RKE+VVVV+++G + V R+ +S VE L +L+VDRH
Sbjct: 241 KATKALRKYKVHAVVANELSTRKEEVVVVSSSGNVVVRRECDKPESFVEDNLIRLIVDRH 300
Query: 305 SVYIKDSNT 313
S YIK+S+
Sbjct: 301 STYIKESHN 309
>sp|Q8GXR5|PPCS1_ARATH Phosphopantothenate--cysteine ligase 1 OS=Arabidopsis thaliana
GN=PPCS1 PE=2 SV=1
Length = 317
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/307 (68%), Positives = 247/307 (80%), Gaps = 1/307 (0%)
Query: 8 EIESFFDSAPPLNDRAAISQKLKEFIALNSS-ESGTRRVACVTSGGTTVPLEQRCVRYID 66
EI SFF+S+PPL ++ I L +FI LNSS + G RR+ CVTSGGTTVPLEQRCVRYID
Sbjct: 11 EISSFFESSPPLKNKEEIVANLNQFIELNSSCQGGMRRIVCVTSGGTTVPLEQRCVRYID 70
Query: 67 NFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQP 126
NFSSG+RGAASTE+ +K GYAVIFLYRRGTC+PYC LPDD FLECFE + +QV
Sbjct: 71 NFSSGNRGAASTENFVKAGYAVIFLYRRGTCQPYCRYLPDDPFLECFEFPDAKNIQVHGS 130
Query: 127 YSEAVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSD 186
+S AVK A+ D AAVA G LLKLPF+TI+EYLQML++IA + +GPCSMFYLAAAVSD
Sbjct: 131 HSGAVKMAVMDQQAAVAEGRLLKLPFSTIYEYLQMLRLIATILKDVGPCSMFYLAAAVSD 190
Query: 187 FYVPWKSMAEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKA 246
FYVPW SM EHKI+SGSGPLD++L QVPKMLS+LR WAP AFCISFKLETD++ILLEKA
Sbjct: 191 FYVPWLSMTEHKIESGSGPLDIRLAQVPKMLSILRSNWAPKAFCISFKLETDSKILLEKA 250
Query: 247 DMARKKYGMHAVVANELLSRKEQVVVVTNNGKIPVYRDKTSSDSDVEKPLTKLLVDRHSV 306
A +KY +HAVVANELL+RKE+VVVV+++G + V RD +S VE L +LLVDRHS
Sbjct: 251 TKALQKYKVHAVVANELLTRKEEVVVVSSSGNVVVRRDSNKPESIVEDNLIRLLVDRHST 310
Query: 307 YIKDSNT 313
YIK+S T
Sbjct: 311 YIKESLT 317
>sp|Q9HAB8|PPCS_HUMAN Phosphopantothenate--cysteine ligase OS=Homo sapiens GN=PPCS PE=1
SV=2
Length = 311
Score = 227 bits (579), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/277 (44%), Positives = 161/277 (58%), Gaps = 7/277 (2%)
Query: 43 RRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCS 102
RRV VTSGGT VPLE R VR++DNFSSG RGA S E + GY V+FLYR + PY
Sbjct: 35 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAH 94
Query: 103 SLPDDAFLECFEVTEESAVQVCQPYSE-----AVKRAIRDHHAAVAGGLLLKLPFTTIFE 157
P +L + + + +E A+R + A A G L + FTT+ +
Sbjct: 95 RFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLAVEFTTLAD 154
Query: 158 YLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQVPKML 217
YL +LQ A + LGP +MFYLAAAVSDFYVP M EHKIQS GPL + + VPK+L
Sbjct: 155 YLHLLQAAAQALNPLGPSAMFYLAAAVSDFYVPVSEMPEHKIQSSGGPLQITMKMVPKLL 214
Query: 218 SVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLSRKEQVVVVTNNG 277
S L K+WAP AF ISFKLETD I++ +A A + Y VVAN L SR+ V +VT +
Sbjct: 215 SPLVKDWAPKAFIISFKLETDPAIVINRARKALEIYQHQVVVANILESRQSFVFIVTKDS 274
Query: 278 --KIPVYRDKTSSDSDVEKPLTKLLVDRHSVYIKDSN 312
K+ + ++ ++E+ + L RH+ +I D N
Sbjct: 275 ETKLLLSEEEIEKGVEIEEKIVDNLQSRHTAFIGDRN 311
>sp|Q9USK7|YJ2I_SCHPO Uncharacterized protein C4B3.18 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC4B3.18 PE=3 SV=1
Length = 316
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 161/267 (60%), Gaps = 7/267 (2%)
Query: 12 FFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSG 71
FF+ P N +S +++FI L +S ++ +A VTSGGT VPLEQ VR+IDNFS+G
Sbjct: 10 FFEENPCPNSLGDVSSLIEDFINL---QSNSQNIAFVTSGGTLVPLEQNTVRFIDNFSAG 66
Query: 72 HRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSL--PDDAFLECFEVTEESAVQVCQPYSE 129
+RGAAS E+ K GY+VIFLYR + P+ P E ++E V Q +
Sbjct: 67 NRGAASAEYFCKSGYSVIFLYRNYSLMPFTRRYEGPWTNLFERSNGSQEKPWIVKQEFQS 126
Query: 130 AVKRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYV 189
V A+ + L+ +P+TT+ EYL L+ IA + + ++FYLAAAVSDF++
Sbjct: 127 TVFNALNELDTYTKHHRLIMIPYTTLTEYLWYLKAIAERLQIIASRALFYLAAAVSDFHI 186
Query: 190 PWKSMAEHKIQSGSG--PLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKAD 247
P K ++EHKIQSGSG L++++ VPK L L WAP A ISFKLETD IL++KA
Sbjct: 187 PPKELSEHKIQSGSGSNKLEVKMHPVPKFLRFLVDTWAPEASIISFKLETDPSILIDKAR 246
Query: 248 MARKKYGMHAVVANELLSRKEQVVVVT 274
+A ++Y V+AN L +RK V VT
Sbjct: 247 VALQRYNHQLVIANLLSTRKRSVAFVT 273
>sp|Q8VDG5|PPCS_MOUSE Phosphopantothenate--cysteine ligase OS=Mus musculus GN=Ppcs PE=2
SV=1
Length = 311
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 171/300 (57%), Gaps = 9/300 (3%)
Query: 22 RAAISQKLKEFIALNSSESG--TRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTE 79
R A + + E +A ++ G RRV +TSGGT VPLE R VR++DNFSSG RGAAS E
Sbjct: 12 RPAGAARWAEVMARFAARLGEQGRRVVLITSGGTKVPLEARAVRFLDNFSSGRRGAASAE 71
Query: 80 HLIKMGYAVIFLYRRGTCEPYCSSLPDDAFLECFEVTEES-----AVQVCQPYSEAVKRA 134
+ GY V+FLYR + PY P A+L + + +++ + A
Sbjct: 72 VFLAAGYGVLFLYRARSAFPYAHRFPPQAWLSALRPSGPAQSGKLSLEAEENALPGFAAA 131
Query: 135 IRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSM 194
++ + A A G L + FTT+ +YL +LQ A++ LG +MFYLAAAVSDFY+P M
Sbjct: 132 LQSYQEAAAAGTFLAVEFTTLADYLHLLQAAALALSPLGSSAMFYLAAAVSDFYIPVSEM 191
Query: 195 AEHKIQSGSGPLDMQLLQVPKMLSVLRKEWAPMAFCISFKLETDAEILLEKADMARKKYG 254
EHKI S GPL + + VPKMLS L K+WAP AF +SFKLETD +I++ +A A + Y
Sbjct: 192 PEHKIHSSGGPLQITMKMVPKMLSPLVKDWAPKAFVVSFKLETDPDIIISRARNALEVYQ 251
Query: 255 MHAVVANELLSRKEQVVVVTNNGKIPVYRDKTSSDSD--VEKPLTKLLVDRHSVYIKDSN 312
VVAN L S K V++VT + + + + +E+ + L RH+ +I D N
Sbjct: 252 HQVVVANILESIKSFVIIVTKDSETELLLSEEEVAKGLVIEEKIVDDLRSRHTAFICDKN 311
>sp|P40506|PPCS_YEAST Phosphopantothenate--cysteine ligase CAB2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CAB2 PE=1
SV=2
Length = 365
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 170/331 (51%), Gaps = 32/331 (9%)
Query: 7 SEIESFFDSAPPLNDRAAISQKLKEFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYID 66
+E E +F + P + + KEFI L S ++ +TSGGTTVPLE VR+ID
Sbjct: 38 TEEEQYFKTNPKPAYIDELIKDAKEFIDLQYSLK-RNKIVLITSGGTTVPLENNTVRFID 96
Query: 67 NFSSGHRGAASTEHLIKMGYAVIFLYRRGTCEPYCSSLP---DDAFLECFEVTEESAVQV 123
NFS+G RGA+S E + GY+VIFL+R + PY S + FL+ +S ++
Sbjct: 97 NFSAGTRGASSAEQFLANGYSVIFLHREFSLTPYNRSFSHSINTLFLDYI----DSEGKI 152
Query: 124 CQPYSEAV--KRAIRDHHAAVAGGLLLKLPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLA 181
++E V + + D + LLL LPFTT+ +YL L+ IA + G C +FYLA
Sbjct: 153 KPEFAENVLKNKKLYDKYMEKEEKLLL-LPFTTVNQYLWSLKSIAKLLNNSG-C-LFYLA 209
Query: 182 AAVSDFYVPWKSMAEHKIQSG-------------------SGPLDMQLLQVPKMLSVLRK 222
AAVSDF+VP+ + +HKIQSG G L + L VPK L L +
Sbjct: 210 AAVSDFFVPYSRLPQHKIQSGDNGKMGANNDTEGTTRTTPDGKLIVNLDPVPKFLRRLVE 269
Query: 223 EWAPMAFCISFKLETDAEILLEKADMARKKYGMHAVVANELLSRKEQVVVVTNNGKIPVY 282
WA A +SFKLETD +LL K A +Y V+ N L +R +QV+ V+ + +
Sbjct: 270 SWATQAMIVSFKLETDESMLLYKCTQALDRYNHQLVIGNLLQTRNKQVIFVSPENRKGDW 329
Query: 283 RDKTSSDSDVEKPLTKLLVDRHSVYIKDSNT 313
+E+ + ++ RH ++ S T
Sbjct: 330 VRLDEKHHSIEEMIIPEVIARHDKWVAHSKT 360
>sp|Q58323|COABC_METJA Coenzyme A biosynthesis bifunctional protein CoaBC
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=coaBC
PE=3 SV=1
Length = 403
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 91/236 (38%), Gaps = 64/236 (27%)
Query: 31 EFIALNSSESGTRRVACVTSGGTTVPLEQRCVRYIDNFSSGHRGAASTEHLIKMGYAVIF 90
E I N + G R + +GGT +++ VR I N SSG G A E K G+ V
Sbjct: 185 EKIGNNLKKEGNR--VLILNGGTVEFIDK--VRVISNLSSGKMGVALAEAFCKEGFYVEV 240
Query: 91 LYRRGTCEPYCSSLPDDAFLECFEVTEESAVQVCQPYSEAVKRAIRDHHAAVAGGLLLK- 149
+ G PY I++H A +L K
Sbjct: 241 ITAMGLEPPYY---------------------------------IKNHKVLTAKEMLNKA 267
Query: 150 LPFTTIFEYLQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQ 209
+ F+ I +SS AA+SDF V E K+ S L ++
Sbjct: 268 IELAKDFD-------IIISS------------AAISDFTVES---FEGKLSSEE-ELILK 304
Query: 210 LLQVPKMLSVLRKEWAPMAFCISFKLE--TDAEILLEKADMARKKYGMHAVVANEL 263
L + PK+L LR+ + I FK E D + L+ +A KY ++ ++AN+L
Sbjct: 305 LKRNPKVLEELRRIYKDKVI-IGFKAEYNLDEKELINRAKERLNKYNLNMIIANDL 359
>sp|Q54LF0|SIR2B_DICDI NAD-dependent deacetylase sir2B OS=Dictyostelium discoideum
GN=sir2B PE=2 SV=1
Length = 778
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 22/143 (15%)
Query: 159 LQMLQMIAVSSRSLGPCSMFYLAAAVSDFYVPWKSMAEHKIQSGSGPLDMQLLQV----- 213
+ +L+ I S S FYL A+ + Y P K++ E + + P + L +
Sbjct: 2 INILKDILYKSYSYLAFPFFYLGWAIKNSYQPNKTIKEEESKPPKYPKEWSDLFIHSYNN 61
Query: 214 --PKMLSVLRKE-----------WAPMAFCISFKLETDAEILLEKA-DMARKKY-GMHAV 258
K+L +++KE W P+ +S K +LLE+ +++ K+Y H
Sbjct: 62 EHEKVLEIIQKEPNSINSVDSLNWTPLHVAVSNKSIEVVTLLLERNIEISIKRYTAFHIA 121
Query: 259 VANELLSRKEQVVVVTN--NGKI 279
N L+ E+++ + NG I
Sbjct: 122 ACNGDLNIIEKMITMNRVPNGNI 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,580,093
Number of Sequences: 539616
Number of extensions: 4049819
Number of successful extensions: 9150
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9133
Number of HSP's gapped (non-prelim): 9
length of query: 313
length of database: 191,569,459
effective HSP length: 117
effective length of query: 196
effective length of database: 128,434,387
effective search space: 25173139852
effective search space used: 25173139852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)