Query 021388
Match_columns 313
No_of_seqs 235 out of 1729
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 03:25:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021388.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021388hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgs_A Dehydrogenase; structur 100.0 2E-74 6.8E-79 541.7 31.2 312 1-313 28-340 (340)
2 4g2n_A D-isomer specific 2-hyd 100.0 1.1E-72 3.7E-77 530.9 39.1 313 1-313 26-345 (345)
3 4e5n_A Thermostable phosphite 100.0 2.8E-70 9.6E-75 512.9 34.6 310 3-313 2-326 (330)
4 3k5p_A D-3-phosphoglycerate de 100.0 1.3E-69 4.4E-74 519.3 36.7 311 2-313 14-331 (416)
5 3kb6_A D-lactate dehydrogenase 100.0 1.6E-70 5.6E-75 515.1 25.7 271 42-312 39-327 (334)
6 3hg7_A D-isomer specific 2-hyd 100.0 1.2E-69 4E-74 506.3 29.5 304 1-313 3-311 (324)
7 1sc6_A PGDH, D-3-phosphoglycer 100.0 8.7E-69 3E-73 514.6 35.7 309 3-313 4-320 (404)
8 3ba1_A HPPR, hydroxyphenylpyru 100.0 5.4E-68 1.9E-72 497.7 37.6 313 1-313 21-333 (333)
9 3gg9_A D-3-phosphoglycerate de 100.0 3.3E-68 1.1E-72 502.2 31.7 309 1-313 1-333 (352)
10 3evt_A Phosphoglycerate dehydr 100.0 1.4E-68 4.7E-73 499.6 28.5 303 4-313 2-311 (324)
11 3jtm_A Formate dehydrogenase, 100.0 1.6E-68 5.3E-73 504.0 27.5 305 3-307 19-333 (351)
12 2pi1_A D-lactate dehydrogenase 100.0 7.6E-69 2.6E-73 503.7 25.1 306 4-313 1-328 (334)
13 2yq5_A D-isomer specific 2-hyd 100.0 3E-68 1E-72 500.4 28.5 308 4-313 2-332 (343)
14 4hy3_A Phosphoglycerate oxidor 100.0 8E-68 2.7E-72 500.6 29.0 296 13-313 45-348 (365)
15 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 5.8E-66 2E-70 484.1 34.7 304 3-310 26-334 (335)
16 1xdw_A NAD+-dependent (R)-2-hy 100.0 7.1E-66 2.4E-70 483.6 33.0 310 4-313 1-331 (331)
17 2cuk_A Glycerate dehydrogenase 100.0 2.6E-65 9E-70 475.8 35.9 307 4-313 1-311 (311)
18 1j4a_A D-LDH, D-lactate dehydr 100.0 9.3E-66 3.2E-70 483.2 30.6 308 4-313 2-331 (333)
19 1wwk_A Phosphoglycerate dehydr 100.0 5.2E-65 1.8E-69 473.1 35.3 301 1-305 1-307 (307)
20 1dxy_A D-2-hydroxyisocaproate 100.0 4.4E-66 1.5E-70 485.3 27.9 307 5-313 2-329 (333)
21 3pp8_A Glyoxylate/hydroxypyruv 100.0 2E-65 6.9E-70 476.7 31.8 296 3-313 3-310 (315)
22 2ekl_A D-3-phosphoglycerate de 100.0 1.2E-64 3.9E-69 472.0 34.4 302 2-309 4-313 (313)
23 1gdh_A D-glycerate dehydrogena 100.0 4.6E-64 1.6E-68 469.3 37.4 307 4-311 2-317 (320)
24 2j6i_A Formate dehydrogenase; 100.0 2.6E-65 8.7E-70 485.1 28.4 308 3-310 17-342 (364)
25 2nac_A NAD-dependent formate d 100.0 1E-64 3.5E-69 483.6 30.6 295 18-312 61-365 (393)
26 1mx3_A CTBP1, C-terminal bindi 100.0 1.3E-63 4.4E-68 470.3 32.9 312 1-313 19-346 (347)
27 2w2k_A D-mandelate dehydrogena 100.0 5.4E-63 1.8E-67 467.0 32.4 311 1-313 1-338 (348)
28 2d0i_A Dehydrogenase; structur 100.0 1.2E-62 4E-67 462.1 32.3 307 3-313 2-318 (333)
29 2gcg_A Glyoxylate reductase/hy 100.0 6.5E-62 2.2E-66 456.7 35.7 312 1-313 6-329 (330)
30 1qp8_A Formate dehydrogenase; 100.0 1.7E-62 5.9E-67 455.2 30.9 292 4-313 1-296 (303)
31 2dbq_A Glyoxylate reductase; D 100.0 5E-62 1.7E-66 458.2 34.2 310 3-313 2-322 (334)
32 3oet_A Erythronate-4-phosphate 100.0 4.7E-61 1.6E-65 455.3 27.3 279 3-307 3-285 (381)
33 1ygy_A PGDH, D-3-phosphoglycer 100.0 3.6E-60 1.2E-64 470.2 33.6 309 1-313 2-314 (529)
34 3gvx_A Glycerate dehydrogenase 100.0 1.6E-60 5.3E-65 438.6 27.8 279 5-307 2-284 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 2.2E-58 7.4E-63 438.0 27.7 279 4-308 1-283 (380)
36 3d64_A Adenosylhomocysteinase; 100.0 5.5E-37 1.9E-41 299.0 0.7 222 66-312 212-445 (494)
37 1v8b_A Adenosylhomocysteinase; 100.0 1.2E-36 4.3E-41 295.5 2.4 225 65-312 191-430 (479)
38 3d4o_A Dipicolinate synthase s 100.0 2E-29 6.9E-34 232.3 14.8 204 1-235 3-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 9.5E-27 3.2E-31 215.0 10.2 210 1-235 5-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.9 2.7E-26 9.2E-31 224.3 1.6 224 66-312 209-445 (494)
41 2vhw_A Alanine dehydrogenase; 99.9 3.6E-23 1.2E-27 196.9 17.6 245 12-286 18-307 (377)
42 2eez_A Alanine dehydrogenase; 99.8 1.9E-20 6.6E-25 177.6 12.3 270 12-310 18-338 (369)
43 1gtm_A Glutamate dehydrogenase 99.8 3.6E-21 1.2E-25 184.8 3.9 155 139-304 206-386 (419)
44 1x13_A NAD(P) transhydrogenase 99.8 2.1E-18 7.3E-23 165.2 10.9 218 12-238 25-301 (401)
45 3h9u_A Adenosylhomocysteinase; 99.7 4.9E-17 1.7E-21 155.6 11.5 153 72-244 153-312 (436)
46 1l7d_A Nicotinamide nucleotide 99.7 1.9E-16 6.4E-21 150.9 14.4 218 12-235 18-300 (384)
47 1gpj_A Glutamyl-tRNA reductase 99.6 2E-17 6.8E-22 158.6 1.9 208 66-307 80-326 (404)
48 3n58_A Adenosylhomocysteinase; 99.6 1.7E-16 6E-21 151.7 7.0 100 139-243 242-347 (464)
49 3gvp_A Adenosylhomocysteinase 99.6 5.5E-15 1.9E-19 141.1 10.3 156 67-242 156-319 (435)
50 3obb_A Probable 3-hydroxyisobu 99.6 5E-15 1.7E-19 136.5 8.2 111 145-257 4-121 (300)
51 4gbj_A 6-phosphogluconate dehy 99.5 1.5E-14 5.2E-19 133.1 10.1 111 145-257 6-121 (297)
52 3l6d_A Putative oxidoreductase 99.4 1.4E-13 4.8E-18 127.0 8.4 115 141-257 6-125 (306)
53 3doj_A AT3G25530, dehydrogenas 99.4 2E-13 6.9E-18 126.1 9.1 115 140-256 17-138 (310)
54 4dll_A 2-hydroxy-3-oxopropiona 99.4 2.7E-13 9.2E-18 125.8 9.0 114 142-257 29-148 (320)
55 3qsg_A NAD-binding phosphogluc 99.4 8.2E-13 2.8E-17 122.2 10.9 135 124-262 3-150 (312)
56 3ggo_A Prephenate dehydrogenas 99.4 2.8E-12 9.5E-17 118.9 13.8 162 128-294 17-192 (314)
57 3qha_A Putative oxidoreductase 99.4 5.8E-13 2E-17 122.2 8.9 106 144-251 15-125 (296)
58 4e21_A 6-phosphogluconate dehy 99.4 9E-13 3.1E-17 124.3 9.9 117 142-260 20-144 (358)
59 3pef_A 6-phosphogluconate dehy 99.4 7.4E-13 2.5E-17 120.7 8.3 110 145-256 2-118 (287)
60 3pdu_A 3-hydroxyisobutyrate de 99.4 1.2E-12 4.1E-17 119.4 8.8 111 145-257 2-119 (287)
61 3g0o_A 3-hydroxyisobutyrate de 99.3 1.3E-12 4.6E-17 120.1 7.1 111 144-256 7-125 (303)
62 2g5c_A Prephenate dehydrogenas 99.3 8E-12 2.7E-16 113.3 12.0 142 145-291 2-157 (281)
63 4ezb_A Uncharacterized conserv 99.3 3.7E-12 1.3E-16 118.1 9.0 132 123-261 6-151 (317)
64 2h78_A Hibadh, 3-hydroxyisobut 99.3 2.9E-12 9.8E-17 117.5 8.1 110 145-256 4-120 (302)
65 2pv7_A T-protein [includes: ch 99.3 1.2E-11 4.3E-16 113.4 11.3 136 121-280 4-142 (298)
66 4e12_A Diketoreductase; oxidor 99.3 1.9E-11 6.6E-16 111.3 12.0 139 145-294 5-173 (283)
67 4gwg_A 6-phosphogluconate dehy 99.3 4.5E-12 1.5E-16 123.8 7.7 114 144-258 4-130 (484)
68 4dio_A NAD(P) transhydrogenase 99.2 9.9E-11 3.4E-15 111.4 14.0 213 12-236 43-319 (405)
69 2zyd_A 6-phosphogluconate dehy 99.2 2.1E-11 7.1E-16 119.2 9.3 109 142-251 13-133 (480)
70 3b1f_A Putative prephenate deh 99.2 1.6E-11 5.5E-16 111.7 7.7 136 144-283 6-158 (290)
71 3p2y_A Alanine dehydrogenase/p 99.2 5.1E-10 1.7E-14 105.7 16.8 207 12-231 40-302 (381)
72 1c1d_A L-phenylalanine dehydro 99.2 1.4E-10 4.7E-15 108.8 12.7 103 141-251 172-280 (355)
73 3dtt_A NADP oxidoreductase; st 99.2 1.7E-11 5.7E-16 109.4 5.7 92 138-232 13-125 (245)
74 2p4q_A 6-phosphogluconate dehy 99.2 7.6E-11 2.6E-15 115.7 10.9 107 144-251 10-129 (497)
75 1vpd_A Tartronate semialdehyde 99.2 5E-11 1.7E-15 108.8 8.2 107 145-251 6-119 (299)
76 2d5c_A AROE, shikimate 5-dehyd 99.2 4.2E-11 1.4E-15 107.8 7.4 157 54-251 60-224 (263)
77 3cky_A 2-hydroxymethyl glutara 99.2 6.3E-11 2.2E-15 108.2 8.5 107 145-251 5-118 (301)
78 1yb4_A Tartronic semialdehyde 99.1 7.3E-11 2.5E-15 107.4 8.7 106 145-251 4-116 (295)
79 2gf2_A Hibadh, 3-hydroxyisobut 99.1 1E-10 3.5E-15 106.5 9.0 104 145-248 1-111 (296)
80 3ktd_A Prephenate dehydrogenas 99.1 8.1E-11 2.8E-15 110.1 7.9 133 144-281 8-154 (341)
81 2uyy_A N-PAC protein; long-cha 99.1 1.5E-10 5.3E-15 106.6 9.1 107 145-251 31-144 (316)
82 2cvz_A Dehydrogenase, 3-hydrox 99.1 1.2E-10 4.1E-15 105.5 7.9 104 145-251 2-110 (289)
83 2iz1_A 6-phosphogluconate dehy 99.1 1.2E-10 4.3E-15 113.6 7.8 106 145-251 6-123 (474)
84 2pgd_A 6-phosphogluconate dehy 99.1 2.2E-10 7.4E-15 112.1 9.3 106 145-251 3-121 (482)
85 2dpo_A L-gulonate 3-dehydrogen 99.1 4.5E-10 1.6E-14 104.1 10.7 139 144-293 6-174 (319)
86 2q3e_A UDP-glucose 6-dehydroge 99.1 1.6E-10 5.6E-15 112.5 8.0 130 145-276 6-181 (467)
87 2f1k_A Prephenate dehydrogenas 99.1 7.8E-10 2.7E-14 99.9 11.4 139 145-290 1-150 (279)
88 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.0 2.8E-10 9.4E-15 111.2 8.1 106 145-251 2-123 (478)
89 3ond_A Adenosylhomocysteinase; 99.0 5.4E-10 1.8E-14 108.5 10.0 142 73-234 208-355 (488)
90 1zej_A HBD-9, 3-hydroxyacyl-CO 99.0 7.5E-10 2.6E-14 101.4 9.3 137 142-294 10-159 (293)
91 3pid_A UDP-glucose 6-dehydroge 99.0 9E-10 3.1E-14 105.9 9.9 112 138-251 30-173 (432)
92 3k6j_A Protein F01G10.3, confi 99.0 1.8E-09 6.3E-14 104.5 12.0 177 96-294 11-218 (460)
93 3fr7_A Putative ketol-acid red 99.0 3.5E-10 1.2E-14 109.2 5.8 92 139-233 48-156 (525)
94 1np3_A Ketol-acid reductoisome 99.0 4.6E-10 1.6E-14 104.9 6.3 130 141-281 13-155 (338)
95 1i36_A Conserved hypothetical 99.0 5.8E-10 2E-14 99.9 6.5 98 145-248 1-105 (264)
96 2raf_A Putative dinucleotide-b 99.0 1.2E-09 4E-14 95.1 8.2 80 140-235 15-94 (209)
97 2yjz_A Metalloreductase steap4 98.5 1E-10 3.4E-15 101.5 0.0 90 142-236 17-110 (201)
98 3d1l_A Putative NADP oxidoredu 98.9 7.6E-10 2.6E-14 99.3 5.3 98 139-238 5-109 (266)
99 1f0y_A HCDH, L-3-hydroxyacyl-C 98.9 8E-09 2.7E-13 94.6 11.4 100 145-246 16-149 (302)
100 2hk9_A Shikimate dehydrogenase 98.9 2.5E-09 8.5E-14 97.0 7.6 165 45-251 65-237 (275)
101 2rcy_A Pyrroline carboxylate r 98.9 2.5E-08 8.4E-13 89.0 13.1 99 144-248 4-106 (262)
102 1leh_A Leucine dehydrogenase; 98.9 7.4E-09 2.5E-13 97.5 9.9 103 141-251 170-279 (364)
103 1y81_A Conserved hypothetical 98.9 7.9E-09 2.7E-13 84.2 8.8 103 142-251 12-118 (138)
104 3gt0_A Pyrroline-5-carboxylate 98.8 4.5E-09 1.5E-13 93.5 7.6 99 145-247 3-111 (247)
105 3gg2_A Sugar dehydrogenase, UD 98.8 8.8E-09 3E-13 99.8 10.1 102 145-247 3-138 (450)
106 1mv8_A GMD, GDP-mannose 6-dehy 98.8 1.4E-08 4.7E-13 98.0 11.3 102 145-247 1-140 (436)
107 2izz_A Pyrroline-5-carboxylate 98.8 9.8E-09 3.3E-13 95.1 9.9 102 142-247 20-132 (322)
108 1pjc_A Protein (L-alanine dehy 98.8 5.8E-08 2E-12 91.4 15.1 210 12-232 18-268 (361)
109 4a7p_A UDP-glucose dehydrogena 98.8 1.9E-08 6.4E-13 97.3 11.6 103 145-248 9-146 (446)
110 3tri_A Pyrroline-5-carboxylate 98.8 1.9E-08 6.4E-13 91.4 10.8 100 144-247 3-112 (280)
111 3oj0_A Glutr, glutamyl-tRNA re 98.8 5.7E-09 1.9E-13 85.1 5.3 85 144-234 21-113 (144)
112 2vns_A Metalloreductase steap3 98.8 9.6E-09 3.3E-13 89.7 6.8 90 143-237 27-121 (215)
113 2ahr_A Putative pyrroline carb 98.8 2.6E-08 8.8E-13 88.9 9.5 96 145-248 4-105 (259)
114 2i99_A MU-crystallin homolog; 98.7 7.7E-09 2.6E-13 95.5 6.0 105 143-256 134-248 (312)
115 3mog_A Probable 3-hydroxybutyr 98.7 1.9E-08 6.4E-13 98.3 8.7 138 144-294 5-172 (483)
116 3c24_A Putative oxidoreductase 98.7 9.6E-09 3.3E-13 93.3 5.8 87 145-234 12-104 (286)
117 2o3j_A UDP-glucose 6-dehydroge 98.7 4E-08 1.4E-12 95.9 10.5 130 145-276 10-187 (481)
118 2duw_A Putative COA-binding pr 98.7 1.8E-08 6.2E-13 82.7 6.8 101 144-251 13-119 (145)
119 3g79_A NDP-N-acetyl-D-galactos 98.7 5.4E-08 1.9E-12 94.8 10.3 99 145-244 19-160 (478)
120 1dlj_A UDP-glucose dehydrogena 98.7 3.3E-08 1.1E-12 94.3 8.7 103 145-250 1-136 (402)
121 2y0c_A BCEC, UDP-glucose dehyd 98.6 8.1E-08 2.8E-12 93.7 9.9 103 144-247 8-144 (478)
122 1yqg_A Pyrroline-5-carboxylate 98.6 1.4E-08 4.9E-13 90.7 3.7 95 145-248 1-103 (263)
123 1zcj_A Peroxisomal bifunctiona 98.6 9.6E-08 3.3E-12 92.8 9.6 111 144-258 37-174 (463)
124 1jay_A Coenzyme F420H2:NADP+ o 98.6 4.5E-08 1.5E-12 84.5 6.4 112 145-263 1-137 (212)
125 2dc1_A L-aspartate dehydrogena 98.6 9.6E-08 3.3E-12 84.3 8.6 99 145-251 1-104 (236)
126 1wdk_A Fatty oxidation complex 98.6 9E-08 3.1E-12 97.8 9.5 137 145-293 315-480 (715)
127 3ojo_A CAP5O; rossmann fold, c 98.6 1.4E-07 4.9E-12 90.6 9.4 106 142-247 9-145 (431)
128 1bg6_A N-(1-D-carboxylethyl)-L 98.6 1.4E-07 4.7E-12 87.8 8.7 101 145-248 5-125 (359)
129 1ks9_A KPA reductase;, 2-dehyd 98.6 1.1E-07 3.9E-12 85.6 7.9 87 145-233 1-99 (291)
130 1x0v_A GPD-C, GPDH-C, glycerol 98.6 9E-08 3.1E-12 89.2 7.4 90 144-235 8-128 (354)
131 1yj8_A Glycerol-3-phosphate de 98.6 5.8E-08 2E-12 91.6 6.1 88 145-234 22-144 (375)
132 3k96_A Glycerol-3-phosphate de 98.6 6.3E-08 2.2E-12 91.0 6.2 92 144-237 29-139 (356)
133 1txg_A Glycerol-3-phosphate de 98.5 1.1E-07 3.6E-12 87.8 6.8 100 145-247 1-124 (335)
134 2wtb_A MFP2, fatty acid multif 98.5 2.2E-07 7.6E-12 95.0 9.5 136 145-293 313-478 (725)
135 3p2o_A Bifunctional protein fo 98.5 3.5E-07 1.2E-11 82.8 9.5 81 139-235 155-236 (285)
136 1b0a_A Protein (fold bifunctio 98.5 2.6E-07 9E-12 83.7 8.7 129 139-303 154-283 (288)
137 3ngx_A Bifunctional protein fo 98.5 3.1E-07 1.1E-11 82.7 8.9 77 142-234 148-225 (276)
138 4huj_A Uncharacterized protein 98.5 1E-07 3.6E-12 83.3 5.7 103 144-250 23-144 (220)
139 3l07_A Bifunctional protein fo 98.5 4.2E-07 1.4E-11 82.3 9.5 81 139-235 156-237 (285)
140 3don_A Shikimate dehydrogenase 98.5 3.4E-07 1.1E-11 83.1 8.9 106 141-251 114-228 (277)
141 3dfu_A Uncharacterized protein 98.5 1.1E-07 3.6E-12 84.1 5.3 71 143-231 5-75 (232)
142 4a26_A Putative C-1-tetrahydro 98.5 3.5E-07 1.2E-11 83.4 8.6 82 139-236 160-244 (300)
143 4a5o_A Bifunctional protein fo 98.5 5.8E-07 2E-11 81.4 9.9 81 139-235 156-237 (286)
144 1a4i_A Methylenetetrahydrofola 98.5 6.4E-07 2.2E-11 81.6 10.3 135 139-304 160-296 (301)
145 2c2x_A Methylenetetrahydrofola 98.5 4.5E-07 1.5E-11 81.9 9.1 110 139-286 153-265 (281)
146 2ew2_A 2-dehydropantoate 2-red 98.5 1.1E-07 3.6E-12 86.7 5.1 104 145-251 4-127 (316)
147 1edz_A 5,10-methylenetetrahydr 98.5 2.9E-07 1E-11 84.9 7.8 90 138-233 171-277 (320)
148 1evy_A Glycerol-3-phosphate de 98.5 5E-08 1.7E-12 91.5 2.6 89 146-236 17-129 (366)
149 2qrj_A Saccharopine dehydrogen 98.4 7E-06 2.4E-10 77.6 17.1 83 143-231 213-300 (394)
150 1z82_A Glycerol-3-phosphate de 98.4 1.8E-07 6E-12 86.8 5.1 82 145-233 15-113 (335)
151 2egg_A AROE, shikimate 5-dehyd 98.4 5.9E-07 2E-11 82.3 8.4 106 141-251 138-258 (297)
152 3u62_A Shikimate dehydrogenase 98.4 7.8E-07 2.7E-11 79.6 8.5 100 142-248 107-214 (253)
153 3phh_A Shikimate dehydrogenase 98.3 1E-06 3.5E-11 79.5 6.1 104 144-251 118-226 (269)
154 1iuk_A Hypothetical protein TT 98.2 3.6E-06 1.2E-10 68.5 8.4 102 143-251 12-119 (140)
155 3ulk_A Ketol-acid reductoisome 98.2 1.1E-06 3.7E-11 83.7 6.0 89 141-233 34-133 (491)
156 3vtf_A UDP-glucose 6-dehydroge 98.2 3.1E-06 1.1E-10 81.5 9.0 133 143-276 20-194 (444)
157 2d59_A Hypothetical protein PH 98.2 6.6E-06 2.3E-10 67.2 8.9 101 144-251 22-126 (144)
158 2i76_A Hypothetical protein; N 98.1 4.7E-07 1.6E-11 81.8 1.6 82 145-234 3-92 (276)
159 3i83_A 2-dehydropantoate 2-red 98.1 5.6E-06 1.9E-10 76.2 8.3 105 145-252 3-125 (320)
160 2g1u_A Hypothetical protein TM 98.1 1.3E-05 4.3E-10 65.7 9.5 94 139-234 14-121 (155)
161 2qyt_A 2-dehydropantoate 2-red 98.1 9.4E-07 3.2E-11 80.7 2.9 100 145-249 9-134 (317)
162 3ado_A Lambda-crystallin; L-gu 98.1 6.1E-06 2.1E-10 76.2 8.3 102 143-246 5-136 (319)
163 3ghy_A Ketopantoate reductase 98.1 2.6E-06 9E-11 78.9 5.5 106 144-252 3-143 (335)
164 3hwr_A 2-dehydropantoate 2-red 98.1 3E-06 1E-10 78.0 5.7 99 142-246 17-134 (318)
165 1x7d_A Ornithine cyclodeaminas 98.1 7.3E-06 2.5E-10 76.7 8.3 87 143-233 128-228 (350)
166 3hdj_A Probable ornithine cycl 98.1 1.6E-05 5.4E-10 73.3 10.1 84 143-234 120-216 (313)
167 3hn2_A 2-dehydropantoate 2-red 98.1 1.5E-05 5.2E-10 73.0 9.8 104 145-253 3-124 (312)
168 3c85_A Putative glutathione-re 98.0 2.7E-06 9.3E-11 71.6 4.1 91 140-232 35-140 (183)
169 1vl6_A Malate oxidoreductase; 98.0 2.3E-05 8E-10 73.8 10.4 92 139-235 187-298 (388)
170 2z2v_A Hypothetical protein PH 98.0 4.1E-06 1.4E-10 78.9 5.2 113 141-262 13-136 (365)
171 1lss_A TRK system potassium up 97.9 2.3E-05 7.9E-10 62.2 7.5 85 144-230 4-102 (140)
172 3fwz_A Inner membrane protein 97.9 9.1E-06 3.1E-10 65.6 4.9 85 144-230 7-104 (140)
173 4b4u_A Bifunctional protein fo 97.9 4.8E-05 1.7E-09 69.2 9.9 79 139-233 174-253 (303)
174 2ewd_A Lactate dehydrogenase,; 97.9 1.4E-05 4.9E-10 73.5 6.1 108 144-253 4-145 (317)
175 3c7a_A Octopine dehydrogenase; 97.9 8.6E-06 2.9E-10 77.3 4.7 84 145-230 3-115 (404)
176 1omo_A Alanine dehydrogenase; 97.9 3.1E-05 1.1E-09 71.5 8.3 82 143-232 124-218 (322)
177 3ic5_A Putative saccharopine d 97.9 1.8E-05 6.1E-10 60.9 5.5 84 143-231 4-100 (118)
178 1p77_A Shikimate 5-dehydrogena 97.9 8E-06 2.7E-10 73.6 4.0 96 141-239 116-222 (272)
179 3g17_A Similar to 2-dehydropan 97.9 6.3E-06 2.2E-10 75.0 3.3 90 145-236 3-101 (294)
180 3o8q_A Shikimate 5-dehydrogena 97.8 8.7E-06 3E-10 73.9 3.8 104 141-249 123-237 (281)
181 1nyt_A Shikimate 5-dehydrogena 97.8 3.1E-05 1.1E-09 69.6 7.4 90 141-234 116-217 (271)
182 2hmt_A YUAA protein; RCK, KTN, 97.8 2.1E-05 7.3E-10 62.6 5.1 90 142-233 4-106 (144)
183 4fgw_A Glycerol-3-phosphate de 97.7 5E-05 1.7E-09 71.9 7.4 87 146-234 36-154 (391)
184 3uuw_A Putative oxidoreductase 97.7 4.9E-05 1.7E-09 69.3 7.1 103 144-251 6-119 (308)
185 3pwz_A Shikimate dehydrogenase 97.7 6.2E-05 2.1E-09 67.9 7.4 105 140-248 116-231 (272)
186 1hyh_A L-hicdh, L-2-hydroxyiso 97.7 3.7E-05 1.3E-09 70.4 5.8 62 145-207 2-81 (309)
187 1j5p_A Aspartate dehydrogenase 97.7 0.00016 5.4E-09 64.4 9.1 101 142-251 10-114 (253)
188 1tlt_A Putative oxidoreductase 97.7 0.00013 4.6E-09 66.7 8.9 102 145-251 6-118 (319)
189 3jyo_A Quinate/shikimate dehyd 97.7 7.8E-05 2.7E-09 67.6 7.2 104 141-248 124-245 (283)
190 3llv_A Exopolyphosphatase-rela 97.7 7.4E-05 2.5E-09 59.8 6.3 85 143-229 5-102 (141)
191 3euw_A MYO-inositol dehydrogen 97.6 0.00012 3.9E-09 67.8 8.3 102 145-251 5-118 (344)
192 1pzg_A LDH, lactate dehydrogen 97.6 0.00012 4.1E-09 67.9 8.1 90 144-233 9-134 (331)
193 2a9f_A Putative malic enzyme ( 97.6 0.0003 1E-08 66.4 10.8 175 90-303 156-356 (398)
194 3qy9_A DHPR, dihydrodipicolina 97.6 0.00029 1E-08 62.4 9.9 81 145-233 4-85 (243)
195 2dvm_A Malic enzyme, 439AA lon 97.6 0.00025 8.4E-09 68.1 10.0 105 140-249 182-312 (439)
196 4hkt_A Inositol 2-dehydrogenas 97.6 0.00016 5.5E-09 66.5 8.3 101 145-251 4-116 (331)
197 1a5z_A L-lactate dehydrogenase 97.6 7.9E-05 2.7E-09 68.6 6.2 107 145-253 1-140 (319)
198 3db2_A Putative NADPH-dependen 97.6 0.00013 4.3E-09 67.9 7.3 101 145-250 6-118 (354)
199 3q2i_A Dehydrogenase; rossmann 97.5 9.3E-05 3.2E-09 68.8 6.3 103 144-251 13-128 (354)
200 3tnl_A Shikimate dehydrogenase 97.5 0.00018 6.3E-09 66.2 8.0 93 140-234 150-266 (315)
201 2ho3_A Oxidoreductase, GFO/IDH 97.5 0.00028 9.5E-09 64.7 9.1 101 146-251 3-115 (325)
202 1guz_A Malate dehydrogenase; o 97.5 0.00017 5.8E-09 66.1 7.4 60 145-205 1-79 (310)
203 3c1a_A Putative oxidoreductase 97.5 5E-05 1.7E-09 69.5 3.9 102 145-251 11-122 (315)
204 3e9m_A Oxidoreductase, GFO/IDH 97.5 0.00016 5.3E-09 66.7 7.1 102 145-251 6-120 (330)
205 2nu8_A Succinyl-COA ligase [AD 97.5 0.00023 7.9E-09 64.7 8.1 104 144-251 7-117 (288)
206 2glx_A 1,5-anhydro-D-fructose 97.5 0.00017 5.9E-09 66.1 7.3 101 146-251 2-115 (332)
207 3fbt_A Chorismate mutase and s 97.5 0.00028 9.4E-09 64.0 8.5 104 141-251 119-232 (282)
208 1nvt_A Shikimate 5'-dehydrogen 97.5 4.1E-05 1.4E-09 69.4 2.9 106 141-251 125-248 (287)
209 3rc1_A Sugar 3-ketoreductase; 97.5 0.00014 4.8E-09 67.7 6.5 105 142-251 25-142 (350)
210 1id1_A Putative potassium chan 97.5 0.00031 1.1E-08 57.1 7.9 87 144-232 3-106 (153)
211 2hjr_A Malate dehydrogenase; m 97.5 0.00021 7.2E-09 66.1 7.5 60 144-204 14-91 (328)
212 1f06_A MESO-diaminopimelate D- 97.5 0.00026 9E-09 65.1 8.1 101 145-250 4-111 (320)
213 3e18_A Oxidoreductase; dehydro 97.5 0.00019 6.4E-09 67.0 7.0 64 145-208 6-78 (359)
214 3evn_A Oxidoreductase, GFO/IDH 97.4 0.00031 1.1E-08 64.6 8.2 102 145-251 6-120 (329)
215 3ff4_A Uncharacterized protein 97.4 0.00041 1.4E-08 54.9 7.8 99 145-251 5-107 (122)
216 3ezy_A Dehydrogenase; structur 97.4 0.00026 9E-09 65.5 7.3 101 145-250 3-116 (344)
217 3bio_A Oxidoreductase, GFO/IDH 97.4 0.00016 5.4E-09 66.1 5.5 101 145-251 10-119 (304)
218 3cea_A MYO-inositol 2-dehydrog 97.4 0.00025 8.6E-09 65.4 6.9 102 145-251 9-125 (346)
219 1t2d_A LDH-P, L-lactate dehydr 97.4 0.00038 1.3E-08 64.2 8.1 58 145-203 5-80 (322)
220 2v6b_A L-LDH, L-lactate dehydr 97.4 0.00016 5.3E-09 66.2 5.2 108 145-253 1-138 (304)
221 3zwc_A Peroxisomal bifunctiona 97.4 0.00047 1.6E-08 70.5 9.0 111 145-259 317-454 (742)
222 2p2s_A Putative oxidoreductase 97.3 0.00047 1.6E-08 63.4 8.3 102 145-251 5-119 (336)
223 3ego_A Probable 2-dehydropanto 97.3 0.00013 4.6E-09 66.6 4.5 101 145-251 3-118 (307)
224 1npy_A Hypothetical shikimate 97.3 0.00074 2.5E-08 60.7 9.0 102 143-251 118-231 (271)
225 1xea_A Oxidoreductase, GFO/IDH 97.3 0.00037 1.3E-08 63.9 7.1 102 145-251 3-116 (323)
226 3t4e_A Quinate/shikimate dehyd 97.3 0.00099 3.4E-08 61.2 9.6 91 141-234 145-260 (312)
227 3e82_A Putative oxidoreductase 97.3 0.00058 2E-08 63.8 8.0 102 145-251 8-120 (364)
228 3l4b_C TRKA K+ channel protien 97.3 0.00028 9.5E-09 60.9 5.3 82 145-228 1-96 (218)
229 3mz0_A Inositol 2-dehydrogenas 97.2 0.0005 1.7E-08 63.6 7.1 101 145-250 3-118 (344)
230 1oi7_A Succinyl-COA synthetase 97.2 0.0012 4.1E-08 59.9 9.4 104 144-251 7-117 (288)
231 3dfz_A SIRC, precorrin-2 dehyd 97.2 0.00074 2.5E-08 59.0 7.6 43 136-178 23-65 (223)
232 3ec7_A Putative dehydrogenase; 97.2 0.00047 1.6E-08 64.2 6.8 66 143-208 22-100 (357)
233 3kux_A Putative oxidoreductase 97.2 0.00095 3.2E-08 61.9 8.7 101 145-250 8-119 (352)
234 3m2t_A Probable dehydrogenase; 97.2 0.00066 2.3E-08 63.3 7.0 101 145-250 6-120 (359)
235 3abi_A Putative uncharacterize 97.1 0.00058 2E-08 63.8 6.6 64 142-206 14-88 (365)
236 3ohs_X Trans-1,2-dihydrobenzen 97.1 0.0012 4E-08 60.8 8.3 102 145-251 3-119 (334)
237 1ydw_A AX110P-like protein; st 97.1 0.00083 2.8E-08 62.5 7.4 102 145-251 7-124 (362)
238 1lld_A L-lactate dehydrogenase 97.1 0.00058 2E-08 62.3 6.0 89 144-234 7-127 (319)
239 2axq_A Saccharopine dehydrogen 97.1 0.00048 1.7E-08 66.7 5.7 108 138-251 17-138 (467)
240 3fef_A Putative glucosidase LP 97.1 0.0008 2.7E-08 64.8 7.0 101 143-244 4-159 (450)
241 2i6t_A Ubiquitin-conjugating e 97.1 0.00068 2.3E-08 62.0 6.2 87 144-233 14-127 (303)
242 3l9w_A Glutathione-regulated p 97.1 0.00039 1.3E-08 66.4 4.6 85 144-230 4-101 (413)
243 3f4l_A Putative oxidoreductase 97.0 0.00052 1.8E-08 63.5 5.1 101 145-250 3-117 (345)
244 2fp4_A Succinyl-COA ligase [GD 97.0 0.0018 6.1E-08 59.3 8.6 107 141-251 10-125 (305)
245 1ff9_A Saccharopine reductase; 97.0 0.00091 3.1E-08 64.5 6.5 64 143-206 2-79 (450)
246 1oju_A MDH, malate dehydrogena 97.0 0.0014 4.7E-08 59.7 7.2 109 145-256 1-147 (294)
247 3do5_A HOM, homoserine dehydro 97.0 0.0024 8.3E-08 59.0 8.9 106 145-251 3-136 (327)
248 1ldn_A L-lactate dehydrogenase 97.0 0.00079 2.7E-08 61.8 5.5 89 144-232 6-124 (316)
249 3q2o_A Phosphoribosylaminoimid 97.0 0.0011 3.6E-08 62.4 6.4 61 141-201 11-81 (389)
250 1y6j_A L-lactate dehydrogenase 96.9 0.0022 7.4E-08 59.0 8.4 110 144-256 7-152 (318)
251 3r6d_A NAD-dependent epimerase 96.9 0.0024 8.1E-08 54.6 7.9 86 145-234 6-110 (221)
252 3fhl_A Putative oxidoreductase 96.9 0.0024 8.2E-08 59.4 8.5 101 145-250 6-117 (362)
253 2ef0_A Ornithine carbamoyltran 96.9 0.0077 2.6E-07 54.9 11.4 155 60-239 95-272 (301)
254 1ur5_A Malate dehydrogenase; o 96.9 0.0011 3.7E-08 60.7 5.7 86 145-232 3-120 (309)
255 3nep_X Malate dehydrogenase; h 96.9 0.0013 4.3E-08 60.5 6.1 94 145-240 1-125 (314)
256 3gvi_A Malate dehydrogenase; N 96.9 0.0021 7.3E-08 59.2 7.5 90 142-232 5-125 (324)
257 2aef_A Calcium-gated potassium 96.9 0.0007 2.4E-08 58.9 4.0 85 143-230 8-105 (234)
258 3gdo_A Uncharacterized oxidore 96.9 0.0012 4E-08 61.5 5.8 101 145-250 6-117 (358)
259 1lc0_A Biliverdin reductase A; 96.8 0.0036 1.2E-07 56.6 8.8 101 145-251 8-118 (294)
260 3ldh_A Lactate dehydrogenase; 96.8 0.0005 1.7E-08 63.6 2.9 89 143-232 20-139 (330)
261 2i6u_A Otcase, ornithine carba 96.8 0.012 4.1E-07 53.8 11.9 91 141-231 145-265 (307)
262 3qvo_A NMRA family protein; st 96.8 0.0015 5.2E-08 56.6 5.8 92 142-235 21-128 (236)
263 1jw9_B Molybdopterin biosynthe 96.8 0.0012 4.1E-08 58.5 5.1 87 140-230 27-152 (249)
264 3i23_A Oxidoreductase, GFO/IDH 96.8 0.0019 6.6E-08 59.8 6.7 102 145-251 3-118 (349)
265 3vku_A L-LDH, L-lactate dehydr 96.8 0.0018 6.1E-08 59.8 6.1 96 142-239 7-131 (326)
266 2vt3_A REX, redox-sensing tran 96.8 0.0016 5.5E-08 56.5 5.5 61 145-205 86-155 (215)
267 3tum_A Shikimate dehydrogenase 96.7 0.0021 7.2E-08 57.7 6.3 92 140-231 121-225 (269)
268 3g79_A NDP-N-acetyl-D-galactos 96.7 0.0054 1.9E-07 59.5 9.6 97 141-241 350-458 (478)
269 1obb_A Maltase, alpha-glucosid 96.7 0.0025 8.6E-08 61.8 7.0 109 144-253 3-173 (480)
270 1h6d_A Precursor form of gluco 96.7 0.0018 6.2E-08 61.9 5.9 102 145-251 84-203 (433)
271 4a7p_A UDP-glucose dehydrogena 96.7 0.0045 1.6E-07 59.5 8.5 97 140-241 318-430 (446)
272 1pvv_A Otcase, ornithine carba 96.7 0.016 5.5E-07 53.1 11.8 91 141-231 152-271 (315)
273 2ixa_A Alpha-N-acetylgalactosa 96.7 0.003 1E-07 60.5 7.2 101 145-250 21-143 (444)
274 3p7m_A Malate dehydrogenase; p 96.7 0.0034 1.1E-07 57.8 7.2 96 143-240 4-129 (321)
275 2yv1_A Succinyl-COA ligase [AD 96.7 0.0043 1.5E-07 56.3 7.8 103 145-251 14-123 (294)
276 3pqe_A L-LDH, L-lactate dehydr 96.6 0.0017 5.9E-08 59.9 5.1 89 144-232 5-123 (326)
277 4ew6_A D-galactose-1-dehydroge 96.6 0.0025 8.4E-08 58.7 6.1 62 143-205 24-91 (330)
278 3e8x_A Putative NAD-dependent 96.6 0.0031 1.1E-07 54.4 6.4 68 139-206 16-95 (236)
279 3orq_A N5-carboxyaminoimidazol 96.6 0.0026 8.7E-08 59.7 6.2 61 141-201 9-79 (377)
280 4fcc_A Glutamate dehydrogenase 96.6 0.0085 2.9E-07 57.4 9.8 104 140-251 231-368 (450)
281 1vlv_A Otcase, ornithine carba 96.6 0.015 5.1E-07 53.5 11.1 162 45-231 84-285 (325)
282 2we8_A Xanthine dehydrogenase; 96.6 0.0082 2.8E-07 56.6 9.5 90 144-251 204-299 (386)
283 3o9z_A Lipopolysaccaride biosy 96.6 0.0045 1.5E-07 56.5 7.5 63 145-207 4-84 (312)
284 2yv2_A Succinyl-COA synthetase 96.6 0.0059 2E-07 55.5 8.1 103 145-251 14-124 (297)
285 3dhn_A NAD-dependent epimerase 96.5 0.0045 1.5E-07 52.9 6.7 62 145-206 5-78 (227)
286 3lk7_A UDP-N-acetylmuramoylala 96.5 0.0064 2.2E-07 58.4 8.5 110 141-250 6-139 (451)
287 3moi_A Probable dehydrogenase; 96.5 0.0028 9.5E-08 59.6 5.7 63 145-207 3-76 (387)
288 3r7f_A Aspartate carbamoyltran 96.5 0.013 4.5E-07 53.4 9.9 91 141-231 144-250 (304)
289 1u8x_X Maltose-6'-phosphate gl 96.5 0.0021 7.2E-08 62.3 4.9 110 144-253 28-193 (472)
290 3d0o_A L-LDH 1, L-lactate dehy 96.5 0.0028 9.7E-08 58.1 5.5 109 143-253 5-147 (317)
291 2nvw_A Galactose/lactose metab 96.5 0.0046 1.6E-07 60.0 7.3 101 144-249 39-165 (479)
292 3oa2_A WBPB; oxidoreductase, s 96.5 0.005 1.7E-07 56.3 7.2 63 145-207 4-85 (318)
293 3ew7_A LMO0794 protein; Q8Y8U8 96.5 0.0068 2.3E-07 51.3 7.4 88 145-233 1-104 (221)
294 3dty_A Oxidoreductase, GFO/IDH 96.4 0.0056 1.9E-07 57.7 7.4 65 144-208 12-98 (398)
295 1zud_1 Adenylyltransferase THI 96.4 0.005 1.7E-07 54.5 6.7 88 140-231 24-150 (251)
296 3k92_A NAD-GDH, NAD-specific g 96.4 0.042 1.4E-06 52.3 13.4 150 140-303 217-392 (424)
297 1dxh_A Ornithine carbamoyltran 96.4 0.012 4E-07 54.4 9.2 160 45-232 71-275 (335)
298 1ez4_A Lactate dehydrogenase; 96.4 0.0037 1.3E-07 57.5 5.8 107 145-253 6-145 (318)
299 4ep1_A Otcase, ornithine carba 96.4 0.023 7.9E-07 52.5 11.1 90 142-231 177-294 (340)
300 1yqd_A Sinapyl alcohol dehydro 96.4 0.0045 1.5E-07 57.6 6.4 86 143-233 187-284 (366)
301 1zh8_A Oxidoreductase; TM0312, 96.4 0.0067 2.3E-07 55.9 7.5 101 145-250 19-134 (340)
302 3ojo_A CAP5O; rossmann fold, c 96.4 0.015 5.1E-07 55.7 10.0 87 142-235 313-410 (431)
303 3tl2_A Malate dehydrogenase; c 96.4 0.0037 1.3E-07 57.4 5.6 97 142-240 6-134 (315)
304 4f3y_A DHPR, dihydrodipicolina 96.4 0.0077 2.6E-07 54.1 7.5 83 145-233 8-106 (272)
305 4fb5_A Probable oxidoreductase 96.4 0.0043 1.5E-07 57.7 6.0 66 143-208 24-107 (393)
306 3dqp_A Oxidoreductase YLBE; al 96.3 0.0096 3.3E-07 50.7 7.7 62 145-206 1-74 (219)
307 2zqz_A L-LDH, L-lactate dehydr 96.3 0.0046 1.6E-07 57.0 6.0 109 143-253 8-149 (326)
308 4had_A Probable oxidoreductase 96.3 0.0029 1E-07 58.3 4.7 63 145-207 24-98 (350)
309 2rir_A Dipicolinate synthase, 96.3 0.016 5.5E-07 52.4 9.3 105 142-251 5-121 (300)
310 3v5n_A Oxidoreductase; structu 96.3 0.0088 3E-07 56.8 7.9 103 144-251 37-163 (417)
311 1pg5_A Aspartate carbamoyltran 96.3 0.016 5.3E-07 52.8 9.1 145 60-232 89-261 (299)
312 2ejw_A HDH, homoserine dehydro 96.3 0.0043 1.5E-07 57.4 5.5 99 145-248 4-116 (332)
313 2yfq_A Padgh, NAD-GDH, NAD-spe 96.3 0.065 2.2E-06 51.0 13.6 105 139-251 207-340 (421)
314 3gpi_A NAD-dependent epimerase 96.3 0.0058 2E-07 54.2 6.1 62 143-204 2-72 (286)
315 4f2g_A Otcase 1, ornithine car 96.2 0.036 1.2E-06 50.6 11.2 91 141-231 151-264 (309)
316 2d4a_B Malate dehydrogenase; a 96.2 0.0032 1.1E-07 57.6 4.3 85 146-232 1-117 (308)
317 1duv_G Octase-1, ornithine tra 96.2 0.012 4.1E-07 54.3 8.0 149 60-232 94-275 (333)
318 3c8m_A Homoserine dehydrogenas 96.2 0.0066 2.2E-07 56.1 6.3 106 145-251 7-142 (331)
319 3btv_A Galactose/lactose metab 96.2 0.0088 3E-07 57.2 7.4 102 145-251 21-148 (438)
320 3aog_A Glutamate dehydrogenase 96.2 0.068 2.3E-06 51.1 13.4 104 140-251 231-358 (440)
321 3i6i_A Putative leucoanthocyan 96.1 0.019 6.6E-07 52.4 9.2 36 142-177 8-44 (346)
322 1hdo_A Biliverdin IX beta redu 96.1 0.0099 3.4E-07 49.6 6.6 63 144-206 3-78 (206)
323 3h2s_A Putative NADH-flavin re 96.1 0.011 3.9E-07 50.1 7.1 88 145-233 1-106 (224)
324 3gd5_A Otcase, ornithine carba 96.1 0.038 1.3E-06 50.7 11.0 91 141-231 154-273 (323)
325 2czc_A Glyceraldehyde-3-phosph 96.1 0.0067 2.3E-07 56.0 6.0 63 145-207 3-91 (334)
326 4ina_A Saccharopine dehydrogen 96.1 0.0033 1.1E-07 59.6 3.9 111 145-262 2-144 (405)
327 4aj2_A L-lactate dehydrogenase 96.1 0.0068 2.3E-07 56.0 5.8 91 141-232 16-137 (331)
328 1ml4_A Aspartate transcarbamoy 96.1 0.0099 3.4E-07 54.3 6.8 145 59-231 94-268 (308)
329 3ijp_A DHPR, dihydrodipicolina 96.1 0.017 5.9E-07 52.2 8.3 84 145-233 22-121 (288)
330 3on5_A BH1974 protein; structu 96.0 0.012 3.9E-07 55.1 7.1 137 145-307 200-345 (362)
331 3csu_A Protein (aspartate carb 96.0 0.024 8E-07 51.9 9.0 91 141-231 151-267 (310)
332 1lu9_A Methylene tetrahydromet 96.0 0.0049 1.7E-07 55.4 4.4 38 141-178 116-154 (287)
333 3rui_A Ubiquitin-like modifier 96.0 0.022 7.5E-07 52.7 8.8 63 101-176 4-67 (340)
334 1xgk_A Nitrogen metabolite rep 96.0 0.0062 2.1E-07 56.3 5.2 92 143-234 4-115 (352)
335 1s6y_A 6-phospho-beta-glucosid 96.0 0.015 5.2E-07 55.9 7.9 110 144-253 7-174 (450)
336 3aoe_E Glutamate dehydrogenase 96.0 0.1 3.4E-06 49.7 13.4 104 140-251 214-337 (419)
337 2q3e_A UDP-glucose 6-dehydroge 96.0 0.024 8.2E-07 54.7 9.2 90 142-234 327-445 (467)
338 4amu_A Ornithine carbamoyltran 95.9 0.035 1.2E-06 51.8 9.8 146 59-232 120-301 (365)
339 3fi9_A Malate dehydrogenase; s 95.9 0.0065 2.2E-07 56.4 4.9 63 142-204 6-85 (343)
340 1xyg_A Putative N-acetyl-gamma 95.9 0.024 8.3E-07 52.8 8.8 83 143-232 15-113 (359)
341 3grf_A Ornithine carbamoyltran 95.9 0.042 1.4E-06 50.6 10.2 91 141-231 158-283 (328)
342 2nqt_A N-acetyl-gamma-glutamyl 95.9 0.022 7.6E-07 53.0 8.4 87 145-238 10-117 (352)
343 4e4t_A Phosphoribosylaminoimid 95.9 0.011 3.6E-07 56.4 6.2 61 141-201 32-102 (419)
344 2bka_A CC3, TAT-interacting pr 95.9 0.015 5E-07 50.1 6.7 65 142-206 16-95 (242)
345 3upl_A Oxidoreductase; rossman 95.9 0.0085 2.9E-07 57.5 5.5 106 145-254 24-163 (446)
346 2dt5_A AT-rich DNA-binding pro 95.9 0.0053 1.8E-07 53.1 3.7 60 145-205 81-150 (211)
347 4gmf_A Yersiniabactin biosynth 95.9 0.0063 2.2E-07 57.1 4.5 62 144-206 7-77 (372)
348 1y1p_A ARII, aldehyde reductas 95.9 0.016 5.3E-07 52.4 7.1 64 141-204 8-92 (342)
349 2w37_A Ornithine carbamoyltran 95.8 0.035 1.2E-06 51.6 9.4 163 45-233 93-297 (359)
350 2ozp_A N-acetyl-gamma-glutamyl 95.8 0.027 9.3E-07 52.2 8.7 82 145-232 5-100 (345)
351 3oqb_A Oxidoreductase; structu 95.8 0.015 5E-07 54.3 6.8 63 145-207 7-95 (383)
352 2xxj_A L-LDH, L-lactate dehydr 95.8 0.008 2.7E-07 54.9 4.8 88 145-232 1-117 (310)
353 1mld_A Malate dehydrogenase; o 95.8 0.029 1E-06 51.2 8.6 94 145-240 1-124 (314)
354 3two_A Mannitol dehydrogenase; 95.8 0.014 4.7E-07 53.8 6.5 87 143-234 176-268 (348)
355 4gqa_A NAD binding oxidoreduct 95.8 0.0047 1.6E-07 58.4 3.3 64 145-208 27-109 (412)
356 4id9_A Short-chain dehydrogena 95.8 0.013 4.4E-07 53.4 6.2 67 139-205 14-87 (347)
357 1qyc_A Phenylcoumaran benzylic 95.8 0.031 1.1E-06 49.8 8.6 34 144-177 4-38 (308)
358 3gg2_A Sugar dehydrogenase, UD 95.8 0.032 1.1E-06 53.6 9.1 90 141-234 315-421 (450)
359 2pzm_A Putative nucleotide sug 95.8 0.017 5.9E-07 52.4 7.0 67 139-205 15-98 (330)
360 1dih_A Dihydrodipicolinate red 95.8 0.0095 3.2E-07 53.5 5.0 59 145-203 6-80 (273)
361 3nv9_A Malic enzyme; rossmann 95.7 0.15 5.1E-06 48.8 13.4 156 90-281 187-367 (487)
362 3ijr_A Oxidoreductase, short c 95.7 0.038 1.3E-06 49.5 8.9 39 140-178 43-82 (291)
363 2cdc_A Glucose dehydrogenase g 95.7 0.0048 1.7E-07 57.3 3.0 88 141-232 178-279 (366)
364 2tmg_A Protein (glutamate dehy 95.7 0.27 9.2E-06 46.6 15.0 105 139-251 204-333 (415)
365 1oth_A Protein (ornithine tran 95.7 0.039 1.3E-06 50.6 8.9 149 59-232 95-272 (321)
366 2csu_A 457AA long hypothetical 95.7 0.018 6.2E-07 55.5 7.0 107 142-251 6-123 (457)
367 1smk_A Malate dehydrogenase, g 95.7 0.013 4.5E-07 53.8 5.8 93 144-238 8-130 (326)
368 1b7g_O Protein (glyceraldehyde 95.7 0.042 1.4E-06 50.8 9.2 61 146-206 3-88 (340)
369 2gas_A Isoflavone reductase; N 95.6 0.03 1E-06 49.9 7.9 34 144-177 2-36 (307)
370 3tpf_A Otcase, ornithine carba 95.6 0.093 3.2E-06 47.8 11.1 98 141-238 142-272 (307)
371 3u3x_A Oxidoreductase; structu 95.6 0.0097 3.3E-07 55.3 4.7 64 143-206 25-99 (361)
372 3mtj_A Homoserine dehydrogenas 95.6 0.0074 2.5E-07 58.0 3.9 104 144-251 10-131 (444)
373 1v9l_A Glutamate dehydrogenase 95.6 0.15 5.1E-06 48.5 12.8 105 139-251 205-339 (421)
374 4gx0_A TRKA domain protein; me 95.6 0.028 9.5E-07 55.3 8.1 78 145-224 349-435 (565)
375 2d8a_A PH0655, probable L-thre 95.6 0.012 4.2E-07 54.1 5.2 85 143-232 167-268 (348)
376 1b8p_A Protein (malate dehydro 95.5 0.033 1.1E-06 51.2 7.9 88 145-232 6-134 (329)
377 3sds_A Ornithine carbamoyltran 95.5 0.096 3.3E-06 48.6 11.0 92 140-231 184-308 (353)
378 1kyq_A Met8P, siroheme biosynt 95.5 0.047 1.6E-06 49.0 8.6 41 137-177 6-46 (274)
379 3r3j_A Glutamate dehydrogenase 95.5 0.11 3.8E-06 49.7 11.5 105 139-251 234-373 (456)
380 3ius_A Uncharacterized conserv 95.5 0.01 3.5E-07 52.5 4.2 60 144-205 5-73 (286)
381 1piw_A Hypothetical zinc-type 95.5 0.014 4.8E-07 54.0 5.2 88 143-233 179-278 (360)
382 1cdo_A Alcohol dehydrogenase; 95.5 0.043 1.5E-06 50.9 8.6 86 143-233 192-296 (374)
383 3e48_A Putative nucleoside-dip 95.4 0.028 9.7E-07 49.7 7.0 61 145-205 1-75 (289)
384 2dkn_A 3-alpha-hydroxysteroid 95.4 0.025 8.6E-07 48.8 6.5 61 145-205 2-72 (255)
385 3keo_A Redox-sensing transcrip 95.4 0.0089 3.1E-07 51.7 3.5 62 144-205 84-158 (212)
386 2jhf_A Alcohol dehydrogenase E 95.4 0.039 1.3E-06 51.2 8.2 85 143-232 191-294 (374)
387 4h3v_A Oxidoreductase domain p 95.4 0.0058 2E-07 56.7 2.5 64 145-208 7-88 (390)
388 3uko_A Alcohol dehydrogenase c 95.4 0.045 1.5E-06 50.9 8.6 85 143-232 193-296 (378)
389 3d6n_B Aspartate carbamoyltran 95.4 0.061 2.1E-06 48.7 9.0 64 141-205 143-214 (291)
390 3eag_A UDP-N-acetylmuramate:L- 95.4 0.031 1.1E-06 51.2 7.2 107 144-250 4-135 (326)
391 4gsl_A Ubiquitin-like modifier 95.4 0.038 1.3E-06 54.9 8.1 73 91-176 285-359 (615)
392 2dq4_A L-threonine 3-dehydroge 95.3 0.019 6.7E-07 52.6 5.7 85 143-232 164-263 (343)
393 4h31_A Otcase, ornithine carba 95.3 0.24 8.2E-06 46.1 13.1 123 86-231 143-300 (358)
394 1rjw_A ADH-HT, alcohol dehydro 95.3 0.017 5.9E-07 52.9 5.3 86 143-233 164-263 (339)
395 2h7i_A Enoyl-[acyl-carrier-pro 95.3 0.013 4.4E-07 51.8 4.3 38 141-178 4-44 (269)
396 1uuf_A YAHK, zinc-type alcohol 95.3 0.013 4.5E-07 54.6 4.5 86 143-233 194-290 (369)
397 2ph5_A Homospermidine synthase 95.3 0.1 3.5E-06 50.3 10.7 100 145-263 14-118 (480)
398 1e3i_A Alcohol dehydrogenase, 95.3 0.046 1.6E-06 50.7 8.2 85 143-232 195-298 (376)
399 2r6j_A Eugenol synthase 1; phe 95.3 0.049 1.7E-06 48.9 8.1 60 145-204 12-88 (318)
400 3m2p_A UDP-N-acetylglucosamine 95.3 0.029 9.8E-07 50.3 6.5 61 144-205 2-72 (311)
401 1cf2_P Protein (glyceraldehyde 95.3 0.022 7.6E-07 52.6 5.8 63 145-207 2-90 (337)
402 1p0f_A NADP-dependent alcohol 95.2 0.045 1.6E-06 50.7 8.0 85 143-232 191-294 (373)
403 2bma_A Glutamate dehydrogenase 95.2 0.13 4.4E-06 49.5 11.1 105 139-251 247-386 (470)
404 4a8t_A Putrescine carbamoyltra 95.2 0.091 3.1E-06 48.5 9.8 147 59-231 112-292 (339)
405 1pjq_A CYSG, siroheme synthase 95.2 0.21 7.2E-06 47.9 12.8 41 137-177 5-45 (457)
406 3mw9_A GDH 1, glutamate dehydr 95.2 0.12 4.2E-06 49.9 10.9 102 141-251 241-366 (501)
407 2fzw_A Alcohol dehydrogenase c 95.2 0.049 1.7E-06 50.5 8.0 85 143-232 190-293 (373)
408 2cf5_A Atccad5, CAD, cinnamyl 95.2 0.021 7.3E-07 52.7 5.4 85 143-232 180-276 (357)
409 3uce_A Dehydrogenase; rossmann 95.1 0.015 5.1E-07 49.8 4.0 91 141-233 3-118 (223)
410 2hcy_A Alcohol dehydrogenase 1 95.1 0.029 9.9E-07 51.6 6.2 86 143-233 169-271 (347)
411 1nvm_B Acetaldehyde dehydrogen 95.1 0.023 8E-07 51.9 5.4 60 145-204 5-80 (312)
412 3ip1_A Alcohol dehydrogenase, 95.1 0.038 1.3E-06 52.0 7.1 87 142-232 212-319 (404)
413 3c1o_A Eugenol synthase; pheny 95.1 0.045 1.5E-06 49.2 7.3 34 144-177 4-38 (321)
414 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.091 3.1E-06 50.8 9.8 94 141-239 325-445 (478)
415 1dhr_A Dihydropteridine reduct 95.1 0.032 1.1E-06 48.3 6.1 94 141-234 4-136 (241)
416 1pqw_A Polyketide synthase; ro 95.1 0.015 5.1E-07 48.8 3.8 36 143-178 38-74 (198)
417 1iz0_A Quinone oxidoreductase; 95.1 0.014 4.9E-07 52.5 3.8 83 143-232 125-219 (302)
418 1ebf_A Homoserine dehydrogenas 95.1 0.046 1.6E-06 50.9 7.4 84 145-233 5-117 (358)
419 1p9l_A Dihydrodipicolinate red 95.0 0.084 2.9E-06 46.5 8.6 87 145-246 1-92 (245)
420 1ys4_A Aspartate-semialdehyde 95.0 0.025 8.6E-07 52.6 5.4 83 145-232 9-115 (354)
421 1qyd_A Pinoresinol-lariciresin 95.0 0.14 4.7E-06 45.6 10.2 61 144-204 4-85 (313)
422 3h8v_A Ubiquitin-like modifier 95.0 0.03 1E-06 50.8 5.7 38 140-177 32-70 (292)
423 2o3j_A UDP-glucose 6-dehydroge 95.0 0.078 2.7E-06 51.3 9.1 97 141-241 332-455 (481)
424 1ooe_A Dihydropteridine reduct 95.0 0.022 7.5E-07 49.2 4.7 92 143-234 2-132 (236)
425 2x5o_A UDP-N-acetylmuramoylala 95.0 0.09 3.1E-06 50.1 9.4 108 142-249 3-130 (439)
426 1e3j_A NADP(H)-dependent ketos 95.0 0.052 1.8E-06 49.9 7.4 86 143-233 168-273 (352)
427 3orf_A Dihydropteridine reduct 94.9 0.028 9.5E-07 49.1 5.3 93 142-234 20-147 (251)
428 2wm3_A NMRA-like family domain 94.9 0.032 1.1E-06 49.7 5.8 61 144-204 5-81 (299)
429 2c5a_A GDP-mannose-3', 5'-epim 94.9 0.06 2.1E-06 49.8 7.8 63 142-204 27-102 (379)
430 1fjh_A 3alpha-hydroxysteroid d 94.9 0.043 1.5E-06 47.7 6.4 92 145-236 2-118 (257)
431 2zcu_A Uncharacterized oxidore 94.9 0.013 4.6E-07 51.6 3.1 59 146-204 1-74 (286)
432 3uog_A Alcohol dehydrogenase; 94.9 0.016 5.6E-07 53.6 3.8 36 143-178 189-224 (363)
433 4a8p_A Putrescine carbamoyltra 94.9 0.11 3.7E-06 48.3 9.2 90 141-231 150-270 (355)
434 1xq6_A Unknown protein; struct 94.9 0.031 1.1E-06 47.9 5.3 64 142-205 2-79 (253)
435 2pk3_A GDP-6-deoxy-D-LYXO-4-he 94.8 0.047 1.6E-06 48.9 6.6 63 143-205 11-84 (321)
436 3m6i_A L-arabinitol 4-dehydrog 94.8 0.077 2.6E-06 48.9 8.1 86 143-233 179-285 (363)
437 1bgv_A Glutamate dehydrogenase 94.8 0.25 8.6E-06 47.3 11.8 36 139-174 225-261 (449)
438 2jl1_A Triphenylmethane reduct 94.8 0.015 5.1E-07 51.4 3.1 60 145-204 1-75 (287)
439 3rft_A Uronate dehydrogenase; 94.8 0.019 6.6E-07 50.5 3.8 62 143-204 2-73 (267)
440 1lnq_A MTHK channels, potassiu 94.8 0.012 4.1E-07 54.0 2.5 80 144-226 115-206 (336)
441 3ip3_A Oxidoreductase, putativ 94.8 0.02 6.9E-07 52.5 4.0 61 145-206 3-78 (337)
442 2z1m_A GDP-D-mannose dehydrata 94.7 0.042 1.4E-06 49.6 6.1 36 143-178 2-38 (345)
443 3k5i_A Phosphoribosyl-aminoimi 94.7 0.043 1.5E-06 51.7 6.4 62 139-201 19-92 (403)
444 3h5n_A MCCB protein; ubiquitin 94.7 0.045 1.5E-06 50.9 6.4 37 140-176 114-151 (353)
445 1vkn_A N-acetyl-gamma-glutamyl 94.7 0.13 4.6E-06 47.7 9.5 82 145-233 14-109 (351)
446 1o6z_A MDH, malate dehydrogena 94.7 0.046 1.6E-06 49.6 6.2 109 145-253 1-143 (303)
447 1pl8_A Human sorbitol dehydrog 94.7 0.059 2E-06 49.7 7.1 86 143-233 171-275 (356)
448 4g65_A TRK system potassium up 94.7 0.013 4.3E-07 56.6 2.5 64 144-207 3-80 (461)
449 3r3s_A Oxidoreductase; structu 94.7 0.088 3E-06 47.1 8.0 37 140-176 45-82 (294)
450 2q1w_A Putative nucleotide sug 94.6 0.053 1.8E-06 49.1 6.5 66 140-205 17-99 (333)
451 4ej6_A Putative zinc-binding d 94.6 0.032 1.1E-06 51.9 5.1 85 143-232 182-285 (370)
452 3s2e_A Zinc-containing alcohol 94.6 0.024 8.4E-07 51.8 4.3 85 143-232 166-264 (340)
453 3slg_A PBGP3 protein; structur 94.6 0.044 1.5E-06 50.3 6.0 64 141-204 21-100 (372)
454 2q1s_A Putative nucleotide sug 94.6 0.051 1.8E-06 50.2 6.5 65 141-205 29-109 (377)
455 3uxy_A Short-chain dehydrogena 94.6 0.053 1.8E-06 47.9 6.3 40 140-179 24-64 (266)
456 3ruf_A WBGU; rossmann fold, UD 94.6 0.047 1.6E-06 49.6 6.1 64 141-204 22-109 (351)
457 2q2v_A Beta-D-hydroxybutyrate 94.6 0.082 2.8E-06 46.1 7.4 37 142-178 2-39 (255)
458 4fs3_A Enoyl-[acyl-carrier-pro 94.6 0.054 1.8E-06 47.6 6.3 38 141-178 3-43 (256)
459 1mv8_A GMD, GDP-mannose 6-dehy 94.6 0.047 1.6E-06 52.0 6.3 82 143-230 312-419 (436)
460 3cps_A Glyceraldehyde 3-phosph 94.6 0.063 2.1E-06 50.0 6.9 30 145-174 18-48 (354)
461 2yyy_A Glyceraldehyde-3-phosph 94.6 0.067 2.3E-06 49.5 7.1 83 145-231 3-113 (343)
462 2ydy_A Methionine adenosyltran 94.5 0.051 1.7E-06 48.6 6.0 61 144-204 2-69 (315)
463 2x0j_A Malate dehydrogenase; o 94.4 0.018 6.2E-07 52.2 2.8 59 145-203 1-77 (294)
464 4eye_A Probable oxidoreductase 94.4 0.036 1.2E-06 50.8 4.9 37 143-179 159-196 (342)
465 3vh1_A Ubiquitin-like modifier 94.4 0.061 2.1E-06 53.3 6.7 37 140-176 323-360 (598)
466 1js1_X Transcarbamylase; alpha 94.4 0.16 5.6E-06 46.5 9.1 88 142-231 167-275 (324)
467 3nrc_A Enoyl-[acyl-carrier-pro 94.4 0.069 2.4E-06 47.3 6.6 38 140-177 22-62 (280)
468 2a4k_A 3-oxoacyl-[acyl carrier 94.4 0.046 1.6E-06 48.2 5.3 38 141-178 3-41 (263)
469 3dr3_A N-acetyl-gamma-glutamyl 94.4 0.043 1.5E-06 50.7 5.2 84 145-233 5-108 (337)
470 3oh8_A Nucleoside-diphosphate 94.4 0.065 2.2E-06 52.1 6.8 62 144-205 147-211 (516)
471 1u8f_O GAPDH, glyceraldehyde-3 94.2 0.066 2.3E-06 49.4 6.2 30 145-174 4-34 (335)
472 1uzm_A 3-oxoacyl-[acyl-carrier 94.2 0.086 2.9E-06 45.8 6.7 64 141-204 12-90 (247)
473 3npg_A Uncharacterized DUF364 94.2 0.18 6.2E-06 44.5 8.7 102 142-250 114-235 (249)
474 4ekn_B Aspartate carbamoyltran 94.2 0.15 5.3E-06 46.3 8.4 117 59-203 90-226 (306)
475 3fpc_A NADP-dependent alcohol 94.2 0.054 1.8E-06 49.8 5.5 36 143-178 166-202 (352)
476 1hdg_O Holo-D-glyceraldehyde-3 94.2 0.055 1.9E-06 49.9 5.5 30 145-174 1-33 (332)
477 2yfk_A Aspartate/ornithine car 94.2 0.17 5.7E-06 48.0 8.9 90 142-231 186-331 (418)
478 1v3u_A Leukotriene B4 12- hydr 94.1 0.031 1.1E-06 50.9 3.8 84 143-232 145-245 (333)
479 3gms_A Putative NADPH:quinone 94.1 0.039 1.3E-06 50.5 4.4 84 143-232 144-244 (340)
480 4dup_A Quinone oxidoreductase; 94.1 0.028 9.4E-07 51.9 3.3 84 143-232 167-266 (353)
481 2gdz_A NAD+-dependent 15-hydro 94.1 0.051 1.7E-06 47.7 4.9 38 141-178 4-42 (267)
482 1zq6_A Otcase, ornithine carba 94.1 0.39 1.3E-05 44.6 11.0 89 142-231 188-315 (359)
483 2x4g_A Nucleoside-diphosphate- 94.1 0.082 2.8E-06 47.7 6.4 60 145-204 14-86 (342)
484 2p4h_X Vestitone reductase; NA 94.0 0.12 4.1E-06 46.1 7.4 60 144-203 1-82 (322)
485 2h6e_A ADH-4, D-arabinose 1-de 94.0 0.039 1.3E-06 50.6 4.2 85 143-232 170-270 (344)
486 1sb8_A WBPP; epimerase, 4-epim 94.0 0.072 2.5E-06 48.5 6.0 65 141-205 24-112 (352)
487 1db3_A GDP-mannose 4,6-dehydra 94.0 0.12 4.1E-06 47.2 7.6 35 144-178 1-36 (372)
488 3d4o_A Dipicolinate synthase s 94.0 0.22 7.4E-06 44.7 9.0 105 142-251 3-119 (293)
489 3ay3_A NAD-dependent epimerase 94.0 0.033 1.1E-06 48.8 3.4 61 145-205 3-73 (267)
490 2gn4_A FLAA1 protein, UDP-GLCN 93.9 0.048 1.7E-06 50.0 4.7 66 140-205 17-101 (344)
491 3tl3_A Short-chain type dehydr 93.9 0.066 2.3E-06 46.7 5.4 39 140-178 5-44 (257)
492 3sxp_A ADP-L-glycero-D-mannohe 93.9 0.087 3E-06 48.2 6.4 39 140-178 6-47 (362)
493 3fbg_A Putative arginate lyase 93.9 0.072 2.4E-06 48.9 5.8 36 143-178 150-186 (346)
494 3tpc_A Short chain alcohol deh 93.9 0.25 8.4E-06 43.0 9.1 39 141-179 4-43 (257)
495 1f8f_A Benzyl alcohol dehydrog 93.9 0.037 1.3E-06 51.3 3.9 85 143-232 190-290 (371)
496 3l5o_A Uncharacterized protein 93.9 0.16 5.6E-06 45.3 7.9 83 141-232 138-220 (270)
497 3q98_A Transcarbamylase; rossm 93.9 0.25 8.6E-06 46.6 9.5 63 141-203 188-274 (399)
498 4b7c_A Probable oxidoreductase 93.9 0.021 7.2E-07 52.1 2.1 85 143-233 149-250 (336)
499 2rh8_A Anthocyanidin reductase 93.9 0.16 5.5E-06 45.8 8.0 60 144-203 9-88 (338)
500 3hhp_A Malate dehydrogenase; M 93.9 0.18 6.3E-06 45.9 8.4 95 145-242 1-127 (312)
No 1
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=2e-74 Score=541.72 Aligned_cols=312 Identities=41% Similarity=0.696 Sum_probs=258.2
Q ss_pred CCceEEEEeCCCChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCc
Q 021388 1 MESIGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDK 80 (313)
Q Consensus 1 m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 80 (313)
|+||+||+++++.+...+.|++.|++..++...+.++++.+ .+++|++++++..++++++++++|+||||++.|+|+|+
T Consensus 28 ~~~~~vl~~~~~~~~~~~~L~~~~~v~~~~~~~~~~~~~~~-~~~~d~li~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~ 106 (340)
T 4dgs_A 28 NVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAA-LPSIRAVATGGGAGLSNEWMEKLPSLGIIAINGVGTDK 106 (340)
T ss_dssp -----CEECSCCCHHHHHTHHHHSCCEETTCGGGHHHHHHH-GGGCCEEEEETTTCBCHHHHHHCSSCCEEEEESSCCTT
T ss_pred CCCCEEEEECCCCHHHHHHHhcCCcEEEeCCCCCHHHHHHH-hCCcEEEEEcCCCCCCHHHHhhCCCCEEEEECCCCccc
Confidence 67899999999999999999988987755332234444444 48999999988888999999999999999999999999
Q ss_pred CChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCC-CcccccccCCCEEEEEcCChHHHHH
Q 021388 81 VDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKG-DYKLTTKFTGKTVGIIGLGRIGMAV 159 (313)
Q Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~-~~~~~~~l~g~~igiiG~G~iG~~i 159 (313)
||+++++++||.|+|+||+++.+||||+++++|+++|+++++++.+++|.|.+. .++.+.+++|++|||||+|.||+.+
T Consensus 107 id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~v 186 (340)
T 4dgs_A 107 VDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRAL 186 (340)
T ss_dssp BCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHH
T ss_pred cCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999854 3345789999999999999999999
Q ss_pred HHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHH
Q 021388 160 AKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDER 239 (313)
Q Consensus 160 A~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~ 239 (313)
|+++++|||+|++|||++....+.....++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|++
T Consensus 187 A~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~ 266 (340)
T 4dgs_A 187 ASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDED 266 (340)
T ss_dssp HHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC------
T ss_pred HHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHH
Confidence 99999999999999998876555555678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 240 ELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 240 al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
+|+++|++|++.||+||||++||++++|||++|||++|||+|++|.++++++...+++||.+|++|+++.++||
T Consensus 267 aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 340 (340)
T 4dgs_A 267 ALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKAPNTVN 340 (340)
T ss_dssp --------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCCTTBC-
T ss_pred HHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999997
No 2
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=1.1e-72 Score=530.92 Aligned_cols=313 Identities=33% Similarity=0.491 Sum_probs=284.9
Q ss_pred CCceEEEEeCCCChhHHHHHHhcCcEEEee-cCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhC-CCccEEEEcCcCC
Q 021388 1 MESIGVLMACPMNTYLEQELERRFNLFKFW-TVSDKTQFLKAQQNNIRAVVGNATAGADAELIDAL-PKLEIVSSFSVGL 78 (313)
Q Consensus 1 m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~ 78 (313)
|+||+||+++++.+...+.|++.|++.... +.+.+++++.+.++++|++++++..++++++++++ |+||||++.|+|+
T Consensus 26 ~~~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~G~ 105 (345)
T 4g2n_A 26 HPIQKAFLCRRFTPAIEAELRQRFDLEVNLEDTVLTPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLSVGY 105 (345)
T ss_dssp -CCCEEEESSCCCHHHHHHHHHHSEEEECTTCCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESSSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHccCCEEEecCCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCCcc
Confidence 468999999999999999999988766432 22335566667789999999987788999999997 7999999999999
Q ss_pred CcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC--cccccccCCCEEEEEcCChHH
Q 021388 79 DKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD--YKLTTKFTGKTVGIIGLGRIG 156 (313)
Q Consensus 79 d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~--~~~~~~l~g~~igiiG~G~iG 156 (313)
|+||++++.++||.|+|+||+++.+||||+++++|++.|++.++++.+++|.|.+.. ...+.++.|++|||||+|.||
T Consensus 106 D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG 185 (345)
T 4g2n_A 106 DHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIG 185 (345)
T ss_dssp TTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHH
T ss_pred cccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhH
Confidence 999999999999999999999999999999999999999999999999999997422 234789999999999999999
Q ss_pred HHHHHHHHhCCCCEEEecCCCCCc---cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 157 MAVAKRAEAFSCPINYYSRTEKPN---LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 157 ~~iA~~l~~~G~~V~~~~~~~~~~---~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
+.+|+++++|||+|++|||++... .+.....++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||
T Consensus 186 ~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG 265 (345)
T 4g2n_A 186 RAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRG 265 (345)
T ss_dssp HHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred HHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCC
Confidence 999999999999999999986432 23444568999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 234 PHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 234 ~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
+++|+++|+++|++|++.||+||||++||.+.+|||++|||++|||+|++|.++++++.+.+++||.+|++|+++.++|+
T Consensus 266 ~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~~~~V~ 345 (345)
T 4g2n_A 266 DLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVPDNLIS 345 (345)
T ss_dssp GGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred chhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999999999999999555699999999999999999999999999999999999999999999885
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=2.8e-70 Score=512.85 Aligned_cols=310 Identities=27% Similarity=0.443 Sum_probs=281.9
Q ss_pred ceEEEEeCCCChhHHHHHHhcCcEEEee-cCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcC
Q 021388 3 SIGVLMACPMNTYLEQELERRFNLFKFW-TVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKV 81 (313)
Q Consensus 3 ~~~vl~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 81 (313)
|++||+++++.+...+.|++.++++... +.+.+++++.+.++++|++++++..++++++++++|+||||++.|+|+||+
T Consensus 2 ~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~i 81 (330)
T 4e5n_A 2 LPKLVITHRVHEEILQLLAPHCELITNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQACPELRVIGCALKGFDNF 81 (330)
T ss_dssp CCEEEECSCCCHHHHHHHTTTCEEECCCSSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHCTTCCEEEESSSCCTTB
T ss_pred CCEEEEecCCCHHHHHHHHhCCeEEEecCCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhCCCCcEEEECCCccccc
Confidence 7899999999999999999988655332 122345556677899999999777899999999999999999999999999
Q ss_pred ChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCC-CcccccccCCCEEEEEcCChHHHHHH
Q 021388 82 DMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKG-DYKLTTKFTGKTVGIIGLGRIGMAVA 160 (313)
Q Consensus 82 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~-~~~~~~~l~g~~igiiG~G~iG~~iA 160 (313)
|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|... ....+.++.|++|||||+|.||+.+|
T Consensus 82 d~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA 161 (330)
T 4e5n_A 82 DVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMA 161 (330)
T ss_dssp CHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHH
T ss_pred CHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999721 12347789999999999999999999
Q ss_pred HHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcc
Q 021388 161 KRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPH 235 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~ 235 (313)
+++++|||+|++||+++... .+.. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||++
T Consensus 162 ~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~ 240 (330)
T 4e5n_A 162 DRLQGWGATLQYHEAKALDTQTEQRLGLR-QVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSV 240 (330)
T ss_dssp HHTTTSCCEEEEECSSCCCHHHHHHHTEE-ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGG
T ss_pred HHHHHCCCEEEEECCCCCcHhHHHhcCce-eCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence 99999999999999987322 1222 34899999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhCCeeEEEecCCCCC-------CCCCC-cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 021388 236 VDERELVSALVEGRLGGAGLDVFENE-------PHVPE-ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKP 307 (313)
Q Consensus 236 vd~~al~~al~~~~l~ga~lDV~~~E-------p~~~~-~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~ 307 (313)
+|+++|+++|++|++.||++|||+.| |++.+ |||++|||++|||+||+|.++.+++.+.+++||.+|++|++
T Consensus 241 vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~ 320 (330)
T 4e5n_A 241 VDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGER 320 (330)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred hCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999 97654 89999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 021388 308 LLTPVV 313 (313)
Q Consensus 308 ~~~~v~ 313 (313)
+.+.||
T Consensus 321 ~~~~vn 326 (330)
T 4e5n_A 321 PINAVN 326 (330)
T ss_dssp CTTBSS
T ss_pred CCCccC
Confidence 999987
No 4
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.3e-69 Score=519.25 Aligned_cols=311 Identities=27% Similarity=0.407 Sum_probs=277.9
Q ss_pred CceEEEEeCCCChhHHHHHHhc-CcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCc
Q 021388 2 ESIGVLMACPMNTYLEQELERR-FNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDK 80 (313)
Q Consensus 2 ~~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 80 (313)
+|+|||+++++.+...+.|++. ++.+.+.+...+++++.+.++++|++++++.+++++++++++|+||+|++.++|+||
T Consensus 14 ~~~kIl~~~~i~~~~~~~l~~~g~~~v~~~~~~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~ 93 (416)
T 3k5p_A 14 DRINVLLLEGISQTAVEYFKSSGYTNVTHLPKALDKADLIKAISSAHIIGIRSRTQLTEEIFAAANRLIAVGCFSVGTNQ 93 (416)
T ss_dssp GGSCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHCTTCCEEEECSSCCTT
T ss_pred CCcEEEEECCCCHHHHHHHHHCCCcEEEECCCCCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhCCCcEEEEECccccCc
Confidence 3689999999999988889876 523333333345566667789999998888889999999999999999999999999
Q ss_pred CChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHH
Q 021388 81 VDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVA 160 (313)
Q Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA 160 (313)
+|+++|+++||.|+|+||+++++||||+++++|++.|+++.+++.+++|.|.+... .+.+++||++||||+|.||+.+|
T Consensus 94 IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~-~~~el~gktvGIIGlG~IG~~vA 172 (416)
T 3k5p_A 94 VELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAI-GSREVRGKTLGIVGYGNIGSQVG 172 (416)
T ss_dssp BCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCT-TCCCSTTCEEEEECCSHHHHHHH
T ss_pred cCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCC-CCccCCCCEEEEEeeCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999985433 46789999999999999999999
Q ss_pred HHHHhCCCCEEEecCCCCCcc-ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHH
Q 021388 161 KRAEAFSCPINYYSRTEKPNL-KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDER 239 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~ 239 (313)
+++++|||+|++||+++.... +.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|++
T Consensus 173 ~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~ 252 (416)
T 3k5p_A 173 NLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLE 252 (416)
T ss_dssp HHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHH
T ss_pred HHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHH
Confidence 999999999999999865433 2344678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeeEEEecCCCCCCCCC-----CcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 240 ELVSALVEGRLGGAGLDVFENEPHVP-----EELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 240 al~~al~~~~l~ga~lDV~~~Ep~~~-----~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
+|+++|++|++.||++|||+.||+++ +|||++|||++|||+||+|.++++++...+++||.+|++|+.+.+.||
T Consensus 253 aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~~~~~Vn 331 (416)
T 3k5p_A 253 ALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVGAVN 331 (416)
T ss_dssp HHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCCCTTBSS
T ss_pred HHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCceee
Confidence 99999999999999999999999875 489999999999999999999999999999999999999888888886
No 5
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=1.6e-70 Score=515.05 Aligned_cols=271 Identities=28% Similarity=0.430 Sum_probs=249.9
Q ss_pred ccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhH
Q 021388 42 QQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCE 121 (313)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~ 121 (313)
.++++|+++++..+++++++++++|+||||++.|+|+||+|+++|.++||.|+|+||+++.+||||+++++|++.|++.+
T Consensus 39 ~l~~ad~i~v~~~~~i~~~~l~~~p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~ 118 (334)
T 3kb6_A 39 ELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKR 118 (334)
T ss_dssp HHHHCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred HhcCCCEEEEeCCCCCCHHHHhcCCCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhcccc
Confidence 35678999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc--cccCCCHHHHhhcCCEE
Q 021388 122 SDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK--YKYYPSVVELASNCHIL 199 (313)
Q Consensus 122 ~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~--~~~~~~l~e~~~~aDvV 199 (313)
+++.++.+.|.......+.++.|+++||||+|+||+.+|+++++|||+|++||+....... .....++++++++||+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDiv 198 (334)
T 3kb6_A 119 IEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVI 198 (334)
T ss_dssp HHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEE
T ss_pred ccccccccccccccccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEE
Confidence 9999999998754444678999999999999999999999999999999999987653221 22356899999999999
Q ss_pred EEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCC-------------
Q 021388 200 VVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPE------------- 266 (313)
Q Consensus 200 ~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~------------- 266 (313)
++|+|+|++|+++|+++.|++||+|++|||+|||++||++||++||++|+|+||+||||+.||++.+
T Consensus 199 slh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~ 278 (334)
T 3kb6_A 199 SLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNL 278 (334)
T ss_dssp EECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHH
T ss_pred EEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999997421
Q ss_pred ---cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 021388 267 ---ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPV 312 (313)
Q Consensus 267 ---~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 312 (313)
|||++|||++|||+||+|.++++++.+.+++||.+|++|+++..++
T Consensus 279 ~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~ 327 (334)
T 3kb6_A 279 KILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKG 327 (334)
T ss_dssp HHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGG
T ss_pred cchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence 5899999999999999999999999999999999999999764433
No 6
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=1.2e-69 Score=506.31 Aligned_cols=304 Identities=22% Similarity=0.380 Sum_probs=270.6
Q ss_pred CCceEEEEeCCCChhHHHHH-HhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCC
Q 021388 1 MESIGVLMACPMNTYLEQEL-ERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLD 79 (313)
Q Consensus 1 m~~~~vl~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d 79 (313)
|+|+|||++++..+.+.+.| ++.++.+.+....+ .++..+.++++|+++++. .+++++++++|+||||++.|+|+|
T Consensus 3 ~~~mkili~~~~~~~~~~~L~~~~~p~~~~~~~~~-~~~~~~~~~~ad~li~~~--~~~~~~l~~~~~Lk~I~~~~~G~d 79 (324)
T 3hg7_A 3 LSQRTLLLLSQDNAHYERLLKAAHLPHLRILRADN-QSDAEKLIGEAHILMAEP--ARAKPLLAKANKLSWFQSTYAGVD 79 (324)
T ss_dssp -CCEEEEEESTTHHHHHHHHHHSCCTTEEEEECSS-HHHHHHHGGGCSEEEECH--HHHGGGGGGCTTCCEEEESSSCCG
T ss_pred ccccEEEEecCCCHHHHHHHhhccCCCeEEEeCCC-hhHHHHHhCCCEEEEECC--CCCHHHHhhCCCceEEEECCCCCC
Confidence 57899999999999999999 66664333322222 344556788999999843 456789999999999999999999
Q ss_pred cCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHH
Q 021388 80 KVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAV 159 (313)
Q Consensus 80 ~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~i 159 (313)
++|++++. +||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.+. .+.+++|++|||||+|.||+.+
T Consensus 80 ~id~~~~~-~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~---~~~~l~g~tvGIIGlG~IG~~v 155 (324)
T 3hg7_A 80 VLLDARCR-RDYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH---PYQGLKGRTLLILGTGSIGQHI 155 (324)
T ss_dssp GGSCTTSC-CSSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC---CCCCSTTCEEEEECCSHHHHHH
T ss_pred ccChHHHh-CCEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC---CCcccccceEEEEEECHHHHHH
Confidence 99998875 4999999999999999999999999999999999999999999753 3578999999999999999999
Q ss_pred HHHHHhCCCCEEEecCCCCCcccc---ccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccc
Q 021388 160 AKRAEAFSCPINYYSRTEKPNLKY---KYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHV 236 (313)
Q Consensus 160 A~~l~~~G~~V~~~~~~~~~~~~~---~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~v 236 (313)
|+++++|||+|++|||++.....+ ....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++
T Consensus 156 A~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~v 235 (324)
T 3hg7_A 156 AHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAI 235 (324)
T ss_dssp HHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGB
T ss_pred HHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhh
Confidence 999999999999999987543322 23468999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCeeEEEecCCCCCCCCCC-cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 237 DERELVSALVEGRLGGAGLDVFENEPHVPE-ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 237 d~~al~~al~~~~l~ga~lDV~~~Ep~~~~-~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
|+++|+++|++|++.||++|||++||++.+ |||++|||++|||+||+|.+ .++.+.+++||.+|++|+++.++||
T Consensus 236 de~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~~G~~~~~~V~ 311 (324)
T 3hg7_A 236 NEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFIDGQPLDGKID 311 (324)
T ss_dssp CHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred CHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHHcCCCCcceEC
Confidence 999999999999999999999999998765 99999999999999999976 6899999999999999999999986
No 7
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=8.7e-69 Score=514.64 Aligned_cols=309 Identities=27% Similarity=0.371 Sum_probs=271.8
Q ss_pred ceEEEEeCCCChhHHHHHHhc-C-cEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCc
Q 021388 3 SIGVLMACPMNTYLEQELERR-F-NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDK 80 (313)
Q Consensus 3 ~~~vl~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 80 (313)
+++||+++++.+...+.|.+. + ++... +...+++++.+.++++|++++++.+++++++++++|+||+|++.++|+||
T Consensus 4 ~~kil~~~~~~~~~~~~l~~~~~~~v~~~-~~~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~ 82 (404)
T 1sc6_A 4 KIKFLLVEGVHQKALESLRAAGYTNIEFH-KGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIGTNQ 82 (404)
T ss_dssp SCCEEECSCCCHHHHHHHHHTTCCCEEEC-SSCCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHCSSCCEEEECSSCCTT
T ss_pred ceEEEEeCCCCHHHHHHHHhCCCcEEEEc-CCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCcEEEECCcccCc
Confidence 578999999988888888775 5 45443 32334555667788999998888889999999999999999999999999
Q ss_pred CChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHH
Q 021388 81 VDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVA 160 (313)
Q Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA 160 (313)
+|+++|+++||.|+|+|++++.+||||++++||++.|+++++++.+++|.|.+..+ .+.+++||++||||+|.||+.+|
T Consensus 83 iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~-~~~el~gktlGiIGlG~IG~~vA 161 (404)
T 1sc6_A 83 VDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAA-GSFEARGKKLGIIGYGHIGTQLG 161 (404)
T ss_dssp BCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC------CCCSTTCEEEEECCSHHHHHHH
T ss_pred cCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCC-CccccCCCEEEEEeECHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999975432 46789999999999999999999
Q ss_pred HHHHhCCCCEEEecCCCCCccc-cccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHH
Q 021388 161 KRAEAFSCPINYYSRTEKPNLK-YKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDER 239 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~~~-~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~ 239 (313)
+++++|||+|++|||+.....+ .....++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++|++
T Consensus 162 ~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~ 241 (404)
T 1sc6_A 162 ILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIP 241 (404)
T ss_dssp HHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHH
T ss_pred HHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHH
Confidence 9999999999999998765433 344568999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeeEEEecCCCCCCCCC-----CcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 240 ELVSALVEGRLGGAGLDVFENEPHVP-----EELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 240 al~~al~~~~l~ga~lDV~~~Ep~~~-----~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
+|.++|++|++.||++|||+.||++. +|||++|||++|||+|++|.++.+++...+++|+.+|++|+++.+.||
T Consensus 242 aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~vn 320 (404)
T 1sc6_A 242 ALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVN 320 (404)
T ss_dssp HHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTTBSS
T ss_pred HHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCcceec
Confidence 99999999999999999999999863 489999999999999999999999999999999999999999888876
No 8
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=5.4e-68 Score=497.73 Aligned_cols=313 Identities=81% Similarity=1.291 Sum_probs=286.9
Q ss_pred CCceEEEEeCCCChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCc
Q 021388 1 MESIGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDK 80 (313)
Q Consensus 1 m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 80 (313)
|+|++||+++++.+...+.|.+.+++..++.....++++.+.++++|++++++..++++++++++|+||||++.|+|+|+
T Consensus 21 m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~p~Lk~I~~~~~G~d~ 100 (333)
T 3ba1_A 21 MEAIGVLMMCPMSTYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDALPKLEIVSSFSVGLDK 100 (333)
T ss_dssp -CCCEEEECSCCCHHHHHHHHHHSEEEEGGGCSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHCTTCCEEEESSSCCTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHhcCCEEEecCCCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhCCCCcEEEEcCccccc
Confidence 77899999999888888889888876554333344555667788999999877778999999999999999999999999
Q ss_pred CChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHH
Q 021388 81 VDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVA 160 (313)
Q Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA 160 (313)
+|+++++++||.|+|+||+++.+||||+++++|++.|++.++++.+++|.|.+.....+.++.|++|||||+|.||+.+|
T Consensus 101 id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA 180 (333)
T 3ba1_A 101 VDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVA 180 (333)
T ss_dssp BCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHH
T ss_pred cCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999974333356789999999999999999999
Q ss_pred HHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHH
Q 021388 161 KRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERE 240 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~a 240 (313)
++++++|++|++||++++...+.....++++++++||+|++|+|.+++|+++++++.++.||+|++|||++||.++|+++
T Consensus 181 ~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~a 260 (333)
T 3ba1_A 181 ERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPE 260 (333)
T ss_dssp HHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHH
T ss_pred HHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHH
Confidence 99999999999999988765555556789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 241 LVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 241 l~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
|.++|++|++.||++|||++||++.+|||++|||++|||+|+.|.++..++.+.+++||.+|++|+++.++||
T Consensus 261 L~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 261 LVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp HHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCSSBCC
T ss_pred HHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999877899999999999999999999999999999999999999999999987
No 9
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=3.3e-68 Score=502.18 Aligned_cols=309 Identities=25% Similarity=0.377 Sum_probs=272.2
Q ss_pred CCceEEEEeCCCChh-----HHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEE-eCCCCCCHHHHhhCCCccEEEEc
Q 021388 1 MESIGVLMACPMNTY-----LEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVG-NATAGADAELIDALPKLEIVSSF 74 (313)
Q Consensus 1 m~~~~vl~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~l~~~~~Lk~i~~~ 74 (313)
|+ |||++++..... .++.+.. +++..+.+...+++++.+.++++|++++ +...++++++++++|+||+|++.
T Consensus 1 ms-mki~~~d~~~~~~~~~~~~~~l~~-~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~~~Lk~I~~~ 78 (352)
T 3gg9_A 1 MS-LKIAVLDDYQDAVRKLDCFSLLQD-HEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRLPKLKIISQT 78 (352)
T ss_dssp -C-CEEEECCCTTCCGGGSGGGGGGTT-SEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTCTTCCEEEES
T ss_pred Cc-eEEEEEcCccccchhhhhhhhhcC-ceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhCCCCeEEEEe
Confidence 66 899998875432 1233433 6555543332345556677899999998 46678999999999999999999
Q ss_pred CcCC----CcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC---------cccccc
Q 021388 75 SVGL----DKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD---------YKLTTK 141 (313)
Q Consensus 75 ~~G~----d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~---------~~~~~~ 141 (313)
|+|+ |+||++++.++||.|+|+||+ +.+||||+++++|++.|++..+++.+++|.|.+.. ...+.+
T Consensus 79 g~G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~ 157 (352)
T 3gg9_A 79 GRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRV 157 (352)
T ss_dssp SCCCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCC
T ss_pred CcccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCcc
Confidence 9999 999999999999999999999 99999999999999999999999999999997532 124678
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCC----ccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKP----NLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~----~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.|++|||||+|.||+.+|+++++|||+|++||++... ..+.....++++++++||+|++|+|++++|+++++++.
T Consensus 158 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~ 237 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVAD 237 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHH
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHH
Confidence 99999999999999999999999999999999997532 12444556899999999999999999999999999999
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCC-CcccCCCceEEccCCCCCcHHHHHHHHHHHH
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVP-EELFGLENVVLMPHVGSGTVETRKTMADLVL 296 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~-~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~ 296 (313)
|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++||++. +|||++|||++|||+|+.|.++++++...++
T Consensus 238 l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~ 317 (352)
T 3gg9_A 238 LTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAF 317 (352)
T ss_dssp HTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHH
T ss_pred HhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999875 4999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCC
Q 021388 297 GNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 297 ~nl~~~~~g~~~~~~v~ 313 (313)
+||.+|++|+|+ +.||
T Consensus 318 ~ni~~~~~G~p~-~~Vn 333 (352)
T 3gg9_A 318 QNILDILQGNVD-SVAN 333 (352)
T ss_dssp HHHHHHHTTCCT-TBSC
T ss_pred HHHHHHHcCCCC-cccC
Confidence 999999999874 7776
No 10
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=1.4e-68 Score=499.58 Aligned_cols=303 Identities=25% Similarity=0.375 Sum_probs=268.8
Q ss_pred eEEEEeCCCChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHH-hhCCCccEEEEcCcCCCcCC
Q 021388 4 IGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELI-DALPKLEIVSSFSVGLDKVD 82 (313)
Q Consensus 4 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~Lk~i~~~~~G~d~id 82 (313)
+|||+++++.+...+.|++.++.+.+...+. ...+.+.++|+++++. .++ ++++ +++|+||||++.|+|+|++|
T Consensus 2 ~kil~~~~~~~~~~~~L~~~~~~~~~~~~~~---~~~~~~~~ad~l~~~~-~~~-~~~l~~~~~~Lk~I~~~~~G~d~id 76 (324)
T 3evt_A 2 SLVLMAQATKPEQLQQLQTTYPDWTFKDAAA---VTAADYDQIEVMYGNH-PLL-KTILARPTNQLKFVQVISAGVDYLP 76 (324)
T ss_dssp CEEEECSCCCHHHHHHHHHHCTTCEEEETTS---CCTTTGGGEEEEESCC-THH-HHHHHSTTCCCCEEECSSSCCTTSC
T ss_pred cEEEEecCCCHHHHHHHHhhCCCeEEecCCc---cChHHhCCcEEEEECC-cCh-HHHHHhhCCCceEEEECCccccccC
Confidence 5799999999999999998864222211111 1123457899998854 346 8889 78999999999999999999
Q ss_pred hhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHH-HHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHH
Q 021388 83 MVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCES-DRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAK 161 (313)
Q Consensus 83 ~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~-~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~ 161 (313)
++++.++||.|+|+||+++.+||||+++++|++.|++.++ ++.+++|.|.+.. .+.++.|++|||||+|.||+.+|+
T Consensus 77 ~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~--~~~~l~gktvGIiGlG~IG~~vA~ 154 (324)
T 3evt_A 77 LKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM--TTSTLTGQQLLIYGTGQIGQSLAA 154 (324)
T ss_dssp HHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS--CCCCSTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC--CCccccCCeEEEECcCHHHHHHHH
Confidence 9999999999999999999999999999999999999999 9999999998542 477899999999999999999999
Q ss_pred HHHhCCCCEEEecCCCCCcccc---ccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccH
Q 021388 162 RAEAFSCPINYYSRTEKPNLKY---KYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDE 238 (313)
Q Consensus 162 ~l~~~G~~V~~~~~~~~~~~~~---~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~ 238 (313)
++++|||+|++|||++...... ....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 155 ~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 234 (324)
T 3evt_A 155 KASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDT 234 (324)
T ss_dssp HHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCH
T ss_pred HHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhH
Confidence 9999999999999987654332 1245789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeEEEecCCCCCCCCCC-cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCC-CCCCCCC
Q 021388 239 RELVSALVEGRLGGAGLDVFENEPHVPE-ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNK-PLLTPVV 313 (313)
Q Consensus 239 ~al~~al~~~~l~ga~lDV~~~Ep~~~~-~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~-~~~~~v~ 313 (313)
++|+++|++|++.||++|||++||++.+ |||++|||++|||+||.|.++.+++.+.+++||.+|++|+ ++.|.||
T Consensus 235 ~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~~~n~V~ 311 (324)
T 3evt_A 235 TALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTLVRNQVD 311 (324)
T ss_dssp HHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCSCBCC
T ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCCCCceEC
Confidence 9999999999999999999999998864 9999999999999999999999999999999999999755 6788876
No 11
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.6e-68 Score=504.00 Aligned_cols=305 Identities=22% Similarity=0.356 Sum_probs=268.9
Q ss_pred ceEEEEeCCCChhHHHHHHhc-CcEEEeecCCChHHHHHhccCCceEEEEeCC--CCCCHHHHhhCCCccEEEEcCcCCC
Q 021388 3 SIGVLMACPMNTYLEQELERR-FNLFKFWTVSDKTQFLKAQQNNIRAVVGNAT--AGADAELIDALPKLEIVSSFSVGLD 79 (313)
Q Consensus 3 ~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~~~~~Lk~i~~~~~G~d 79 (313)
+|++|-.++....+.+.|++. ++++.+.+....++++.+.++++|++++++. .++++++++++|+||||++.|+|+|
T Consensus 19 ~~~~lg~~~~~l~~~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g~G~d 98 (351)
T 3jtm_A 19 NPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSD 98 (351)
T ss_dssp CTTCCSSTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESSSCCT
T ss_pred CCCEEEeccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeCeeec
Confidence 344444444444667788776 5655543332244456778899999998653 4689999999999999999999999
Q ss_pred cCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCc-ccccccCCCEEEEEcCChHHHH
Q 021388 80 KVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDY-KLTTKFTGKTVGIIGLGRIGMA 158 (313)
Q Consensus 80 ~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~-~~~~~l~g~~igiiG~G~iG~~ 158 (313)
|+|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..... ..+.++.|++|||||+|.||+.
T Consensus 99 ~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~ 178 (351)
T 3jtm_A 99 HIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKL 178 (351)
T ss_dssp TBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHH
T ss_pred ccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHH
Confidence 999999999999999999999999999999999999999999999999999974221 2357899999999999999999
Q ss_pred HHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 159 VAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 159 iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
+|+++++|||+|++||+++... .+.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||
T Consensus 179 vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG 258 (351)
T 3jtm_A 179 LLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARG 258 (351)
T ss_dssp HHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred HHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCc
Confidence 9999999999999999986432 23444568999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHhCCeeEEEecCCCCCCCCCC-cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 021388 234 PHVDERELVSALVEGRLGGAGLDVFENEPHVPE-ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKP 307 (313)
Q Consensus 234 ~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~-~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~ 307 (313)
+++|+++|+++|++|++.||++|||++||++.+ |||++|||++|||+||.|.+++.++.+.+.+||.+|++|++
T Consensus 259 ~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~ 333 (351)
T 3jtm_A 259 AIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGED 333 (351)
T ss_dssp GGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999998765 99999999999999999999999999999999999999996
No 12
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=7.6e-69 Score=503.69 Aligned_cols=306 Identities=27% Similarity=0.402 Sum_probs=268.7
Q ss_pred eEEEEeCCCCh---hHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCc
Q 021388 4 IGVLMACPMNT---YLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDK 80 (313)
Q Consensus 4 ~~vl~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 80 (313)
|||++.+. .+ ...+.+.+.+++..+ ..+.. +++.+.++++|+++++...++++++++++|+||||++.|+|+|+
T Consensus 1 Mki~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~-~e~~~~~~~~d~li~~~~~~i~~~~l~~~~~Lk~I~~~~~G~d~ 77 (334)
T 2pi1_A 1 MNVLFTSV-PQEDVPFYQEALKDLSLKIY-TTDVS-KVPENELKKAELISVFVYDKLTEELLSKMPRLKLIHTRSVGFDH 77 (334)
T ss_dssp CEEEECSC-CTTHHHHHHHHTTTSEEEEC-SSCGG-GSCHHHHHHCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTT
T ss_pred CEEEEEcc-ChhhHHHHHHHhhcCCEEEE-CCCCc-HHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCccccc
Confidence 37777543 33 244455555544433 22223 33445677999999977789999999999999999999999999
Q ss_pred CChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHH
Q 021388 81 VDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVA 160 (313)
Q Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA 160 (313)
+|+++++++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.......+.++.|++|||||+|.||+.+|
T Consensus 78 id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA 157 (334)
T 2pi1_A 78 IDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVA 157 (334)
T ss_dssp BCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHH
T ss_pred cCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999975412257899999999999999999999
Q ss_pred HHHHhCCCCEEEecCCCCCcc---ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcccc
Q 021388 161 KRAEAFSCPINYYSRTEKPNL---KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD 237 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~~---~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd 237 (313)
+++++|||+|++||+++.... +.. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|
T Consensus 158 ~~l~~~G~~V~~~d~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd 236 (334)
T 2pi1_A 158 MYGLAFGMKVLCYDVVKREDLKEKGCV-YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHHCcCEEEEECCCcchhhHhcCce-ecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccC
Confidence 999999999999999876432 232 3469999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeeEEEecCCCCCCC---------------CC-CcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHH
Q 021388 238 ERELVSALVEGRLGGAGLDVFENEPH---------------VP-EELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEA 301 (313)
Q Consensus 238 ~~al~~al~~~~l~ga~lDV~~~Ep~---------------~~-~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~ 301 (313)
+++|+++|++|++.||++|||+.||+ +. +|||++|||++|||+|++|.++.+++.+.+++||.+
T Consensus 237 ~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~ 316 (334)
T 2pi1_A 237 TDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKA 316 (334)
T ss_dssp HHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997 23 489999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCC
Q 021388 302 HFLNKPLLTPVV 313 (313)
Q Consensus 302 ~~~g~~~~~~v~ 313 (313)
|++|+++.++||
T Consensus 317 ~~~g~~~~~~Vn 328 (334)
T 2pi1_A 317 FVKGDLEQIKGN 328 (334)
T ss_dssp HHHTCGGGGGGG
T ss_pred HHcCCCCCceEC
Confidence 999999998886
No 13
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=3e-68 Score=500.37 Aligned_cols=308 Identities=20% Similarity=0.285 Sum_probs=263.4
Q ss_pred eEEEEeCC--CChhHHHHHHhc--CcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHH-HHhhCC--CccEEEEcCc
Q 021388 4 IGVLMACP--MNTYLEQELERR--FNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAE-LIDALP--KLEIVSSFSV 76 (313)
Q Consensus 4 ~~vl~~~~--~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~--~Lk~i~~~~~ 76 (313)
+||++.+. ......+.+.+. +++... +...+++ ..+.++++|+++++...+++++ +++++| +||+|++.|+
T Consensus 2 mki~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~-~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~ 79 (343)
T 2yq5_A 2 TKIAMYNVSPIEVPYIEDWAKKNDVEIKTT-DQALTSA-TVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIV 79 (343)
T ss_dssp CEEEEESCCGGGHHHHHHHHHHHTCEEEEE-SSCCSTT-GGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSS
T ss_pred ceEEEEecCcccHHHHHHHHHhCCeEEEEC-CCCCCHH-HHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECce
Confidence 56677552 222333444333 344333 3222333 3467889999999877899999 999986 6999999999
Q ss_pred CCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHh-cCCCCCCCcccccccCCCEEEEEcCChH
Q 021388 77 GLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVR-SGKWKKGDYKLTTKFTGKTVGIIGLGRI 155 (313)
Q Consensus 77 G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~-~~~w~~~~~~~~~~l~g~~igiiG~G~i 155 (313)
|+|+||++++.++||.|+|+||+++.+||||+++++|++.|++..+++.++ +|.|.......+.++.|++|||||+|.|
T Consensus 80 G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~I 159 (343)
T 2yq5_A 80 GFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHI 159 (343)
T ss_dssp CCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHH
T ss_pred eecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHH
Confidence 999999999999999999999999999999999999999999999999999 8876532223578999999999999999
Q ss_pred HHHHHHHHHhCCCCEEEecCCCCCccc-cccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCc
Q 021388 156 GMAVAKRAEAFSCPINYYSRTEKPNLK-YKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 156 G~~iA~~l~~~G~~V~~~~~~~~~~~~-~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~ 234 (313)
|+.+|+++++|||+|++||+++..... .....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+
T Consensus 160 G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~ 239 (343)
T 2yq5_A 160 GSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGE 239 (343)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGG
T ss_pred HHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCCh
Confidence 999999999999999999998764221 1223489999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHhCCeeEEEecCCCCCC--CCCC------------cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHH
Q 021388 235 HVDERELVSALVEGRLGGAGLDVFENEP--HVPE------------ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLE 300 (313)
Q Consensus 235 ~vd~~al~~al~~~~l~ga~lDV~~~Ep--~~~~------------~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~ 300 (313)
++|+++|+++|++|++.||+||||++|| ++.+ |||++|||++|||+|++|.++++++.+.+++||.
T Consensus 240 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni~ 319 (343)
T 2yq5_A 240 LVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQL 319 (343)
T ss_dssp GBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 4433 7999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCC
Q 021388 301 AHFLNKPLLTPVV 313 (313)
Q Consensus 301 ~~~~g~~~~~~v~ 313 (313)
+|++|+++.++||
T Consensus 320 ~~l~g~~~~~~v~ 332 (343)
T 2yq5_A 320 TIAKGGRPRSIVN 332 (343)
T ss_dssp HHHTTCCCTTBC-
T ss_pred HHHcCCCCCceEC
Confidence 9999999999986
No 14
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=8e-68 Score=500.62 Aligned_cols=296 Identities=19% Similarity=0.319 Sum_probs=258.7
Q ss_pred ChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEc-CcCCCcCChhhhhhcCc
Q 021388 13 NTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSF-SVGLDKVDMVKCKEKGV 91 (313)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~-~~G~d~id~~~~~~~gI 91 (313)
.+..++.|++.++++.. +....++++++...++++++. ..++++++++++|+||+|+.. ++|+|++|+++|+++||
T Consensus 45 ~~~~~~~L~~~~~v~~~-~~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~p~Lk~I~~~~~~G~d~iD~~~a~~~GI 121 (365)
T 4hy3_A 45 SDEARAALHSKYEIVEA-DPENIAGLGDDILGRARYIIG--QPPLSAETLARMPALRSILNVESNLLNNMPYEVLFQRGI 121 (365)
T ss_dssp CHHHHHHHHHHSEEEEC-CGGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTCTTCCEEECCSSSCCSCSCTTHHHHSCC
T ss_pred CHHHHHHHhCCcEEEEC-CCCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhCCCCeEEEEecccccCcccHHHHhcCCe
Confidence 45577889888877643 222333434444467888775 368999999999999999975 89999999999999999
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCC--CCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCCC
Q 021388 92 RVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGK--WKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCP 169 (313)
Q Consensus 92 ~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~--w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~ 169 (313)
.|+|+||+++.+||||+++++|++.|++.++++.+++|. |.......+.++.|++|||||+|.||+.+|+++++|||+
T Consensus 122 ~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~ 201 (365)
T 4hy3_A 122 HVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSGFRAR 201 (365)
T ss_dssp EEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSCCE
T ss_pred EEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhhCCCE
Confidence 999999999999999999999999999999999999998 543222357889999999999999999999999999999
Q ss_pred EEEecCCCCCc----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHH
Q 021388 170 INYYSRTEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSAL 245 (313)
Q Consensus 170 V~~~~~~~~~~----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al 245 (313)
|++||++.... .+.. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||++||+++|+++|
T Consensus 202 V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 280 (365)
T 4hy3_A 202 IRVFDPWLPRSMLEENGVE-PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAV 280 (365)
T ss_dssp EEEECSSSCHHHHHHTTCE-ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHH
T ss_pred EEEECCCCCHHHHhhcCee-eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHH
Confidence 99999986432 1222 458999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeeEEEecCCCCCCCCCC-cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 246 VEGRLGGAGLDVFENEPHVPE-ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 246 ~~~~l~ga~lDV~~~Ep~~~~-~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
++|+|. |+||||++||++.+ |||++|||++|||+||.|.+++.++...+++||.+|++|+++.+.||
T Consensus 281 ~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~~~~~~vn 348 (365)
T 4hy3_A 281 SSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMDRGLPPMRCKR 348 (365)
T ss_dssp HTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHHTTCCCCSSEE
T ss_pred HcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 999998 89999999998764 99999999999999999999999999999999999999999988765
No 15
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-66 Score=484.14 Aligned_cols=304 Identities=27% Similarity=0.436 Sum_probs=267.6
Q ss_pred ceEEEEeCCCChhHHHHHHhc-CcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcC
Q 021388 3 SIGVLMACPMNTYLEQELERR-FNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKV 81 (313)
Q Consensus 3 ~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 81 (313)
.++|++++++.+...+.|++. +++..+ .. .+++++.+.++++|++++++..++++++++++|+||||++.++|+|++
T Consensus 26 ~~~vli~~~~~~~~~~~l~~~~~~v~~~-~~-~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~i 103 (335)
T 2g76_A 26 LRKVLISDSLDPCCRKILQDGGLQVVEK-QN-LSKEELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNV 103 (335)
T ss_dssp CCEEEECSCCCHHHHHHHHHHTCEEEEC-CS-CCHHHHHHHGGGCSEEEECSSSCBCHHHHHHCSSCCEEEESSSSCTTB
T ss_pred ceEEEEcCCCCHHHHHHHHhCCCEEEEC-CC-CCHHHHHHHhcCceEEEEcCCCCCCHHHHhhCCCCcEEEECCCCcchh
Confidence 458999999888888888775 444332 22 234445566789999999877789999999999999999999999999
Q ss_pred ChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHH
Q 021388 82 DMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAK 161 (313)
Q Consensus 82 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~ 161 (313)
|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.+... .+.++.|++|||||+|.||+.+|+
T Consensus 104 d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~-~~~~l~g~tvgIIGlG~IG~~vA~ 182 (335)
T 2g76_A 104 DLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKF-MGTELNGKTLGILGLGRIGREVAT 182 (335)
T ss_dssp CHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGG-CBCCCTTCEEEEECCSHHHHHHHH
T ss_pred ChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCC-CCcCCCcCEEEEEeECHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999974322 467899999999999999999999
Q ss_pred HHHhCCCCEEEecCCCCCc----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcccc
Q 021388 162 RAEAFSCPINYYSRTEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD 237 (313)
Q Consensus 162 ~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd 237 (313)
++++||++|++||++.... .+.. ..++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++|
T Consensus 183 ~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd 261 (335)
T 2g76_A 183 RMQSFGMKTIGYDPIISPEVSASFGVQ-QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVD 261 (335)
T ss_dssp HHHTTTCEEEEECSSSCHHHHHHTTCE-ECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBC
T ss_pred HHHHCCCEEEEECCCcchhhhhhcCce-eCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccC
Confidence 9999999999999986542 1222 3589999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 021388 238 ERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLT 310 (313)
Q Consensus 238 ~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~ 310 (313)
+++|+++|++|++.||+||||+.||.+.+|||++||+++|||+|++|.++.+++.+.+++||.+|++|+++.|
T Consensus 262 ~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 262 EGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999666799999999999999999999999999999999999999998865
No 16
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=7.1e-66 Score=483.60 Aligned_cols=310 Identities=22% Similarity=0.326 Sum_probs=270.2
Q ss_pred eEEEEeC--CCChhHHHHHHhcCcE-EEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCC--ccEEEEcCcCC
Q 021388 4 IGVLMAC--PMNTYLEQELERRFNL-FKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPK--LEIVSSFSVGL 78 (313)
Q Consensus 4 ~~vl~~~--~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--Lk~i~~~~~G~ 78 (313)
|||++.+ +......+.+.+.+++ +.+.....++++..+.++++|+++++...++++++++++|+ ||||++.|+|+
T Consensus 1 mki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~ 80 (331)
T 1xdw_A 1 MKVLCYGVRDVELPIFEACNKEFGYDIKCVPDYLNTKETAEMAAGFDAVILRGNCFANKQNLDIYKKLGVKYILTRTAGT 80 (331)
T ss_dssp CEEEECSCCTTTHHHHHHHGGGTCCEEEECSCCSCSHHHHHTTTTCSEEEECTTCCBCHHHHHHHHHHTCCEEEESSSCC
T ss_pred CEEEEEecCccCHHHHHHHHHhcCeEEEECCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhCcccCceEEEEccccc
Confidence 3677754 4445566777665542 22223222334455678899999998777899999999998 99999999999
Q ss_pred CcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHH
Q 021388 79 DKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMA 158 (313)
Q Consensus 79 d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~ 158 (313)
|++|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.......+.++.|++|||||+|.||+.
T Consensus 81 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~ 160 (331)
T 1xdw_A 81 DHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRV 160 (331)
T ss_dssp TTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHH
T ss_pred cccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999998531112467899999999999999999
Q ss_pred HHHHHHhCCCCEEEecCCCCCcc-ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcccc
Q 021388 159 VAKRAEAFSCPINYYSRTEKPNL-KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD 237 (313)
Q Consensus 159 iA~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd 237 (313)
+|+++++|||+|++||++..... ......++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd 240 (331)
T 1xdw_A 161 AAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVD 240 (331)
T ss_dssp HHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBC
T ss_pred HHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCccccc
Confidence 99999999999999999876432 11123589999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeeEEEecCCCCCCC--CC--------C----cccCC-CceEEccCCCCCcHHHHHHHHHHHHHHHHHH
Q 021388 238 ERELVSALVEGRLGGAGLDVFENEPH--VP--------E----ELFGL-ENVVLMPHVGSGTVETRKTMADLVLGNLEAH 302 (313)
Q Consensus 238 ~~al~~al~~~~l~ga~lDV~~~Ep~--~~--------~----~L~~~-pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~ 302 (313)
+++|+++|++|++.||+||||++||+ +. + |||++ |||++|||+|++|.++..++.+.+++||.+|
T Consensus 241 ~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~ 320 (331)
T 1xdw_A 241 TEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLKDL 320 (331)
T ss_dssp HHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999994 21 2 69999 9999999999999999999999999999999
Q ss_pred HcCCCCCCCCC
Q 021388 303 FLNKPLLTPVV 313 (313)
Q Consensus 303 ~~g~~~~~~v~ 313 (313)
++|+++.+.||
T Consensus 321 ~~g~~~~~~v~ 331 (331)
T 1xdw_A 321 AETGDCPNKIK 331 (331)
T ss_dssp HHHSCCTTBCC
T ss_pred HcCCCCCCCCC
Confidence 99999999987
No 17
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-65 Score=475.81 Aligned_cols=307 Identities=37% Similarity=0.575 Sum_probs=275.3
Q ss_pred eEEEEeCCCChhHHHHHHhc-CcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcCC
Q 021388 4 IGVLMACPMNTYLEQELERR-FNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVD 82 (313)
Q Consensus 4 ~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 82 (313)
|+||+++++.+...+.|.+. +++........+++++.+.++++|+++++...++++++++++|+||||++.|+|+|++|
T Consensus 1 ~~vl~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 80 (311)
T 2cuk_A 1 MRVLVTRTLPGKALDRLRERGLEVEVHRGLFLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRAKGLKVIACYSVGVDHVD 80 (311)
T ss_dssp CEEEESSCCSSSTTHHHHHTTCEEEECCSSCCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHSTTCCEEECSSSCCTTBC
T ss_pred CEEEEeCCCCHHHHHHHHhcCCeEEEecCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEECCcCccccC
Confidence 57889888877777788877 66543322222445556678899999987667899999999999999999999999999
Q ss_pred hhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCC--CcccccccCCCEEEEEcCChHHHHHH
Q 021388 83 MVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKG--DYKLTTKFTGKTVGIIGLGRIGMAVA 160 (313)
Q Consensus 83 ~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~--~~~~~~~l~g~~igiiG~G~iG~~iA 160 (313)
++++.++||.|+|+||+++.+||||+++++|++.|+++.+++.+++|.|... ....+.++.|++|||||+|.||+.+|
T Consensus 81 ~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A 160 (311)
T 2cuk_A 81 LEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVA 160 (311)
T ss_dssp HHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHH
T ss_pred HHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999631 11246789999999999999999999
Q ss_pred HHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHH
Q 021388 161 KRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERE 240 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~a 240 (313)
++++++|++|++|||+.+... . ...++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+++|+++
T Consensus 161 ~~l~~~G~~V~~~d~~~~~~~-~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~a 238 (311)
T 2cuk_A 161 KRALAFGMRVVYHARTPKPLP-Y-PFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEA 238 (311)
T ss_dssp HHHHHTTCEEEEECSSCCSSS-S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHH
T ss_pred HHHHHCCCEEEEECCCCcccc-c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHH
Confidence 999999999999999876543 2 35689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeEEEecCCCCCCCCC-CcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 241 LVSALVEGRLGGAGLDVFENEPHVP-EELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 241 l~~al~~~~l~ga~lDV~~~Ep~~~-~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
|.++|+ |++.||++|||+.||++. +|||++||+++|||++++|.++..++.+.+++||.+|++|+++.+.|+
T Consensus 239 L~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 311 (311)
T 2cuk_A 239 LVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPVV 311 (311)
T ss_dssp HHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBCC
T ss_pred HHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCccC
Confidence 999999 999999999999999765 589999999999999999999999999999999999999999988874
No 18
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=9.3e-66 Score=483.20 Aligned_cols=308 Identities=24% Similarity=0.304 Sum_probs=267.4
Q ss_pred eEEEEeCC--CChhHHHHHHhcC-c-EEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCC--ccEEEEcCcC
Q 021388 4 IGVLMACP--MNTYLEQELERRF-N-LFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPK--LEIVSSFSVG 77 (313)
Q Consensus 4 ~~vl~~~~--~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--Lk~i~~~~~G 77 (313)
|+|++... ......+.+.+.+ + .+.+++....+ ++.+.++++|+++++...++++++++++|+ ||||++.|+|
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G 80 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTP-ETVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNVG 80 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSCCCT-TTGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSC
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCCCcH-HHHHHhcCCcEEEEcCCCCCCHHHHHhccccCCeEEEECCcc
Confidence 46777543 3344556676655 2 23222222222 344567899999997777899999999988 9999999999
Q ss_pred CCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHH
Q 021388 78 LDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGM 157 (313)
Q Consensus 78 ~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~ 157 (313)
+|++|++++.++||.|+|+||+++.+||||+++++|++.|++.++++.+++|.|.... ..+.++.|++|||||+|.||+
T Consensus 81 ~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~l~g~~vgIiG~G~IG~ 159 (333)
T 1j4a_A 81 VDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAP-TIGREVRDQVVGVVGTGHIGQ 159 (333)
T ss_dssp CTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTT-CCBCCGGGSEEEEECCSHHHH
T ss_pred cccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCC-cccccCCCCEEEEEccCHHHH
Confidence 9999999999999999999999999999999999999999999999999999986322 246789999999999999999
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcc--ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcc
Q 021388 158 AVAKRAEAFSCPINYYSRTEKPNL--KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPH 235 (313)
Q Consensus 158 ~iA~~l~~~G~~V~~~~~~~~~~~--~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~ 235 (313)
.+|+++++||++|++||++..... ......++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||++
T Consensus 160 ~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~ 239 (333)
T 1j4a_A 160 VFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPL 239 (333)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred HHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcc
Confidence 999999999999999999876421 122334899999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhCCeeEEEecCCCCCCC--CC--------C----cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHH
Q 021388 236 VDERELVSALVEGRLGGAGLDVFENEPH--VP--------E----ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEA 301 (313)
Q Consensus 236 vd~~al~~al~~~~l~ga~lDV~~~Ep~--~~--------~----~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~ 301 (313)
+|+++|+++|++|++.||+||||++||. ++ + |||++|||++|||+|++|.++.+++.+.+++||.+
T Consensus 240 vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~ 319 (333)
T 1j4a_A 240 VDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNLE 319 (333)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999993 32 2 49999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCC
Q 021388 302 HFLNKPLLTPVV 313 (313)
Q Consensus 302 ~~~g~~~~~~v~ 313 (313)
|++|+++.+.||
T Consensus 320 ~~~g~~~~~~v~ 331 (333)
T 1j4a_A 320 LVEGKEAETPVK 331 (333)
T ss_dssp HHTTCCCSSBCC
T ss_pred HHcCCCCCcccc
Confidence 999999999886
No 19
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.2e-65 Score=473.13 Aligned_cols=301 Identities=35% Similarity=0.574 Sum_probs=267.7
Q ss_pred CCceEEEEeCCCChhHHHHHHhc-CcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCC
Q 021388 1 MESIGVLMACPMNTYLEQELERR-FNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLD 79 (313)
Q Consensus 1 m~~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d 79 (313)
|.|++|++++++.+...+.|++. +++. +.. ..+++++.+.++++|+++++..+++++++++++|+||||++.|+|+|
T Consensus 1 ~~~~~il~~~~~~~~~~~~l~~~~~~~~-~~~-~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d 78 (307)
T 1wwk_A 1 MKRMKVLVAAPLHEKAIQVLKDAGLEVI-YEE-YPDEDRLVELVKDVEAIIVRSKPKVTRRVIESAPKLKVIARAGVGLD 78 (307)
T ss_dssp ---CEEEECSCCCHHHHHHHHHTTCEEE-ECS-SCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTCTTCCEEEESSSCCT
T ss_pred CCceEEEEeCCCCHHHHHHHHhCCeEEE-eCC-CCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCeEEEECCcccc
Confidence 66789999998888777778763 4333 222 22344556678899999987666799999999999999999999999
Q ss_pred cCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHH
Q 021388 80 KVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAV 159 (313)
Q Consensus 80 ~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~i 159 (313)
++|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.+.. ..+.++.|++|||||+|.||+.+
T Consensus 79 ~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~l~g~~vgIiG~G~IG~~~ 157 (307)
T 1wwk_A 79 NIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKE-AMGIELEGKTIGIIGFGRIGYQV 157 (307)
T ss_dssp TBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTT-CCBCCCTTCEEEEECCSHHHHHH
T ss_pred ccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccC-cCCcccCCceEEEEccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997422 24678999999999999999999
Q ss_pred HHHHHhCCCCEEEecCCCCCc----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcc
Q 021388 160 AKRAEAFSCPINYYSRTEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPH 235 (313)
Q Consensus 160 A~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~ 235 (313)
|+++++||++|++||+++... .+.. ..++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||++
T Consensus 158 A~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~ 236 (307)
T 1wwk_A 158 AKIANALGMNILLYDPYPNEERAKEVNGK-FVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPV 236 (307)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGG
T ss_pred HHHHHHCCCEEEEECCCCChhhHhhcCcc-ccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcc
Confidence 999999999999999987642 2232 34799999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHhCCeeEEEecCCCCCCCCC-CcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcC
Q 021388 236 VDERELVSALVEGRLGGAGLDVFENEPHVP-EELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLN 305 (313)
Q Consensus 236 vd~~al~~al~~~~l~ga~lDV~~~Ep~~~-~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g 305 (313)
+|+++|.++|++|++.||++|||+.||++. +|||++||+++|||++++|.++..++.+.+++||.+|++|
T Consensus 237 vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 237 VDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp BCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999854 5999999999999999999999999999999999999986
No 20
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.4e-66 Score=485.26 Aligned_cols=307 Identities=22% Similarity=0.349 Sum_probs=266.2
Q ss_pred EEEEeC--CCChhHHHHHHhcCc-EEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCC--ccEEEEcCcCCC
Q 021388 5 GVLMAC--PMNTYLEQELERRFN-LFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPK--LEIVSSFSVGLD 79 (313)
Q Consensus 5 ~vl~~~--~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--Lk~i~~~~~G~d 79 (313)
||++.+ +......+.+.+.+. .+.+++....+ ++.+.++++|++++++..++++++++++|+ ||||++.|+|+|
T Consensus 2 kil~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d 80 (333)
T 1dxy_A 2 KIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDE-NTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRNVGTD 80 (333)
T ss_dssp EEEECSCCTTTHHHHHHHHHHHCCEEEECSSCCCT-TGGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESSSCCT
T ss_pred EEEEEeccccCHHHHHHHHHhCCeEEEEcCCCChH-HHHHHhcCCeEEEEcCCCCCCHHHHHhCcccCceEEEEcCcccC
Confidence 677754 444455566655433 22222222222 344567899999997777899999999988 999999999999
Q ss_pred cCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCC-CCcccccccCCCEEEEEcCChHHHH
Q 021388 80 KVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK-GDYKLTTKFTGKTVGIIGLGRIGMA 158 (313)
Q Consensus 80 ~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~-~~~~~~~~l~g~~igiiG~G~iG~~ 158 (313)
++|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.. .. ..+.++.|++|||||+|.||+.
T Consensus 81 ~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~l~g~~vgIiG~G~IG~~ 159 (333)
T 1dxy_A 81 NIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGT-FIGKELGQQTVGVMGTGHIGQV 159 (333)
T ss_dssp TBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTC-CCCCCGGGSEEEEECCSHHHHH
T ss_pred ccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccC-CCccCCCCCEEEEECcCHHHHH
Confidence 999999999999999999999999999999999999999999999999999852 22 2467899999999999999999
Q ss_pred HHHHHHhCCCCEEEecCCCCCcc-ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcccc
Q 021388 159 VAKRAEAFSCPINYYSRTEKPNL-KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD 237 (313)
Q Consensus 159 iA~~l~~~G~~V~~~~~~~~~~~-~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd 237 (313)
+|+++++|||+|++||++..... ......++++++++||+|++|+|++++|+++++++.|+.||+|+++||+|||+++|
T Consensus 160 ~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd 239 (333)
T 1dxy_A 160 AIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLID 239 (333)
T ss_dssp HHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBC
T ss_pred HHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccC
Confidence 99999999999999999876431 11123489999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeeEEEecCCCCCCC-----------CC---CcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 021388 238 ERELVSALVEGRLGGAGLDVFENEPH-----------VP---EELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHF 303 (313)
Q Consensus 238 ~~al~~al~~~~l~ga~lDV~~~Ep~-----------~~---~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~ 303 (313)
+++|+++|++|++.||+||||++||. +. +|||++|||++|||+|++|.++..++.+.+++||.+|+
T Consensus 240 ~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~~ 319 (333)
T 1dxy_A 240 TQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFL 319 (333)
T ss_dssp HHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999993 12 37999999999999999999999999999999999999
Q ss_pred cCCCCCCCCC
Q 021388 304 LNKPLLTPVV 313 (313)
Q Consensus 304 ~g~~~~~~v~ 313 (313)
+|+++.+.||
T Consensus 320 ~g~~~~~~v~ 329 (333)
T 1dxy_A 320 TKGETSTEVT 329 (333)
T ss_dssp HHSCCTTEEC
T ss_pred cCCCCCceeC
Confidence 9999988775
No 21
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=2e-65 Score=476.72 Aligned_cols=296 Identities=23% Similarity=0.333 Sum_probs=259.3
Q ss_pred ceEEEEeCCCC--hhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCc
Q 021388 3 SIGVLMACPMN--TYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDK 80 (313)
Q Consensus 3 ~~~vl~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 80 (313)
+|+||+..+.. +.+.+.+++.++.+.+...+. ...+++|+++++. .+++++++ |+||||++.|+|+|+
T Consensus 3 ~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~~~------~~~~~ad~~i~~~---~~~~~l~~-~~Lk~I~~~~aG~d~ 72 (315)
T 3pp8_A 3 AMEIIFYHPTFNAAWWVNALEKALPHARVREWKV------GDNNPADYALVWQ---PPVEMLAG-RRLKAVFVLGAGVDA 72 (315)
T ss_dssp CEEEEEECSSSCHHHHHHHHHHHSTTEEEEECCT------TCCSCCSEEEESS---CCHHHHTT-CCCSEEEESSSCCHH
T ss_pred ceEEEEEcCCCchHHHHHHHHHHCCCCEEEecCC------CCccCcEEEEECC---CCHHHhCC-CCceEEEECCEeccc
Confidence 47888877644 456778888875332211111 1346899999964 47999999 999999999999999
Q ss_pred C-C-hhh---hhhcCcEEEcCCCCC-hHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCCh
Q 021388 81 V-D-MVK---CKEKGVRVTNTPDVL-TDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGR 154 (313)
Q Consensus 81 i-d-~~~---~~~~gI~v~n~~~~~-~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~ 154 (313)
+ | +++ +.++||.|+|++++. +.+||||+++++|++.|++..+++.+++|.|.+. .+.++.|++|||||+|.
T Consensus 73 i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~---~~~~l~g~tvGIiG~G~ 149 (315)
T 3pp8_A 73 ILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL---PEYTREEFSVGIMGAGV 149 (315)
T ss_dssp HHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC---CCCCSTTCCEEEECCSH
T ss_pred ccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC---CCCCcCCCEEEEEeeCH
Confidence 9 7 876 678999999998764 8999999999999999999999999999999753 36789999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEecCCCCCcccccc---CCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcC
Q 021388 155 IGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 155 iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~---~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
||+.+|+++++|||+|++|||+++...+... ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|
T Consensus 150 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 150 LGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp HHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 9999999999999999999998775443322 2579999999999999999999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCC-cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 021388 232 RGPHVDERELVSALVEGRLGGAGLDVFENEPHVPE-ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLT 310 (313)
Q Consensus 232 rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~-~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~ 310 (313)
||+++|+++|+++|++|++.||+||||++||++.+ |||++|||++|||+|++|.+ +++.+.+++||.+|++|+++.+
T Consensus 230 RG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~~~~~ 307 (315)
T 3pp8_A 230 RGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGEPVTG 307 (315)
T ss_dssp CGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTCCCCC
T ss_pred CChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999998764 99999999999999999985 6899999999999999999999
Q ss_pred CCC
Q 021388 311 PVV 313 (313)
Q Consensus 311 ~v~ 313 (313)
.||
T Consensus 308 ~V~ 310 (315)
T 3pp8_A 308 QVD 310 (315)
T ss_dssp BCC
T ss_pred eEC
Confidence 986
No 22
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.2e-64 Score=472.00 Aligned_cols=302 Identities=25% Similarity=0.417 Sum_probs=272.7
Q ss_pred CceEEEEeCCCChhHHHHHHhc-CcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCc
Q 021388 2 ESIGVLMACPMNTYLEQELERR-FNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDK 80 (313)
Q Consensus 2 ~~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 80 (313)
.+++|++++++.+...+.|.+. +++. +.. ..+++++.+.++++|++++++..++++++++++|+||||++.|+|+|+
T Consensus 4 ~~mkil~~~~~~~~~~~~l~~~~~~v~-~~~-~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~ 81 (313)
T 2ekl_A 4 YTVKALITDPIDEILIKTLREKGIQVD-YMP-EISKEELLNIIGNYDIIVVRSRTKVTKDVIEKGKKLKIIARAGIGLDN 81 (313)
T ss_dssp CCCEEEECSCCCHHHHHHHHHTTCEEE-ECT-TCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHCTTCCEEEECSSCCTT
T ss_pred cceEEEEECCCCHHHHHHHHhCCcEEE-eCC-CCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhCCCCeEEEEcCCCCCc
Confidence 3678999998888877888775 4432 222 223445566788999999876678999999999999999999999999
Q ss_pred CChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHH
Q 021388 81 VDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVA 160 (313)
Q Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA 160 (313)
+|++++.++||.|+|+||+++.+||||+++++|++.|+++.+++.+++|.|.. ..+.++.|++|||||+|.||+.+|
T Consensus 82 id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~l~g~~vgIIG~G~IG~~~A 158 (313)
T 2ekl_A 82 IDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKK---IEGLELAGKTIGIVGFGRIGTKVG 158 (313)
T ss_dssp BCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC---CCCCCCTTCEEEEESCSHHHHHHH
T ss_pred cCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC---CCCCCCCCCEEEEEeeCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999962 246789999999999999999999
Q ss_pred HHHHhCCCCEEEecCCCCCc----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccc
Q 021388 161 KRAEAFSCPINYYSRTEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHV 236 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~v 236 (313)
++++++|++|++||++++.. .+.. ..++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+++
T Consensus 159 ~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~v 237 (313)
T 2ekl_A 159 IIANAMGMKVLAYDILDIREKAEKINAK-AVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAV 237 (313)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGB
T ss_pred HHHHHCCCEEEEECCCcchhHHHhcCce-ecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCccc
Confidence 99999999999999987642 2333 248999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCeeEEEecCCCCCCCCCC---cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 021388 237 DERELVSALVEGRLGGAGLDVFENEPHVPE---ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLL 309 (313)
Q Consensus 237 d~~al~~al~~~~l~ga~lDV~~~Ep~~~~---~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~ 309 (313)
|+++|.++|++|++.||++|||+.||++.+ |||++|||++|||+|++|.++.+++.+.+++||.+|++|+++.
T Consensus 238 d~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l~ 313 (313)
T 2ekl_A 238 NGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGMI 313 (313)
T ss_dssp CHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999887 8999999999999999999999999999999999999999874
No 23
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.6e-64 Score=469.26 Aligned_cols=307 Identities=28% Similarity=0.500 Sum_probs=273.2
Q ss_pred eEEEEeCCCChhHHHHHHhcCcEEEeec-CCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCC-ccEEEEcCcCCCcC
Q 021388 4 IGVLMACPMNTYLEQELERRFNLFKFWT-VSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPK-LEIVSSFSVGLDKV 81 (313)
Q Consensus 4 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-Lk~i~~~~~G~d~i 81 (313)
++|++++++.+...+.|.+.+++..... .+.+++++.+.++++|+++++...++++++++++|+ ||||++.|+|+|++
T Consensus 2 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~i 81 (320)
T 1gdh_A 2 KKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDHI 81 (320)
T ss_dssp CEEEESSCCCHHHHHHHHTTSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESSCCTTB
T ss_pred cEEEEcCCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhCCccceEEEECCcccccc
Confidence 5788988888888888887776543322 123445566778899999998767899999999999 99999999999999
Q ss_pred ChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC--cccccccCCCEEEEEcCChHHHHH
Q 021388 82 DMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD--YKLTTKFTGKTVGIIGLGRIGMAV 159 (313)
Q Consensus 82 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~--~~~~~~l~g~~igiiG~G~iG~~i 159 (313)
|++++.++||.|+|+||+++.+||||+++++|++.|++.++++.+++|.|.... ...+.++.|++|||||+|.||+.+
T Consensus 82 d~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~ 161 (320)
T 1gdh_A 82 DLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQAL 161 (320)
T ss_dssp CHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHH
T ss_pred cHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHH
Confidence 999999999999999999999999999999999999999999999999996311 124678999999999999999999
Q ss_pred HHHHHhCCCCEEEecC-CCCCc----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCc
Q 021388 160 AKRAEAFSCPINYYSR-TEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 160 A~~l~~~G~~V~~~~~-~~~~~----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~ 234 (313)
|+++++||++|++||+ ++... .+.....++++++++||+|++|+|.+++|+++++++.++.||+|+++||+|||+
T Consensus 162 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~ 241 (320)
T 1gdh_A 162 AKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGD 241 (320)
T ss_dssp HHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGG
T ss_pred HHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999 77542 233334489999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q 021388 235 HVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTP 311 (313)
Q Consensus 235 ~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~ 311 (313)
++|+++|.++|++|++.||++|||+.||...+|||++||+++|||++++|.++..++.+.+ +||.+|++|+++.+.
T Consensus 242 ~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~~~~ 317 (320)
T 1gdh_A 242 LVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGADMSY 317 (320)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSCCTT
T ss_pred ccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCCccc
Confidence 9999999999999999999999999999444699999999999999999999999999999 999999999987653
No 24
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=2.6e-65 Score=485.13 Aligned_cols=308 Identities=22% Similarity=0.315 Sum_probs=267.7
Q ss_pred ceEEEEeCCCChhHHHHHHhc-CcEEEeecCCChHHHHHhccCCceEEEEeCC--CCCCHHHHhhCCCccEEEEcCcCCC
Q 021388 3 SIGVLMACPMNTYLEQELERR-FNLFKFWTVSDKTQFLKAQQNNIRAVVGNAT--AGADAELIDALPKLEIVSSFSVGLD 79 (313)
Q Consensus 3 ~~~vl~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~~~~~Lk~i~~~~~G~d 79 (313)
+|+||+.+...+.+.+.|++. +++..+.......+++.+.++++|+++++.. .++++++++++|+||||++.++|+|
T Consensus 17 ~~~vl~~d~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d 96 (364)
T 2j6i_A 17 EEKLYGCTENKLGIANWLKDQGHELITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAGVGSD 96 (364)
T ss_dssp CTTCTTBTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHCTTCCEEEESSSCCT
T ss_pred CceEEEecCccHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhCCCCeEEEECCcccc
Confidence 355666776666677777765 4544433222233445667889999998542 3589999999999999999999999
Q ss_pred cCChhhhhhc--CcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCc-ccccccCCCEEEEEcCChHH
Q 021388 80 KVDMVKCKEK--GVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDY-KLTTKFTGKTVGIIGLGRIG 156 (313)
Q Consensus 80 ~id~~~~~~~--gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~-~~~~~l~g~~igiiG~G~iG 156 (313)
|+|++++.++ ||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..... ..+.++.|++|||||+|+||
T Consensus 97 ~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG 176 (364)
T 2j6i_A 97 HIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIG 176 (364)
T ss_dssp TBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHH
T ss_pred cccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHH
Confidence 9999999999 99999999999999999999999999999999999999999973211 13678999999999999999
Q ss_pred HHHHHHHHhCCCC-EEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEc
Q 021388 157 MAVAKRAEAFSCP-INYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINI 230 (313)
Q Consensus 157 ~~iA~~l~~~G~~-V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~ 230 (313)
+.+|+++++|||+ |++||++.... .+.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+
T Consensus 177 ~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~ 256 (364)
T 2j6i_A 177 YRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNT 256 (364)
T ss_dssp HHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEEC
Confidence 9999999999998 99999876432 23334458999999999999999999999999999999999999999999
Q ss_pred CCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCC-cccCC--C---ceEEccCCCCCcHHHHHHHHHHHHHHHHHHHc
Q 021388 231 GRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPE-ELFGL--E---NVVLMPHVGSGTVETRKTMADLVLGNLEAHFL 304 (313)
Q Consensus 231 ~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~-~L~~~--p---nv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~ 304 (313)
|||+++|+++|+++|++|++.||+||||++||++.+ |||.+ | ||++|||+|++|.++..++...+++||.+|++
T Consensus 257 arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~ 336 (364)
T 2j6i_A 257 ARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILESFFT 336 (364)
T ss_dssp SCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999998764 89999 9 99999999999999999999999999999999
Q ss_pred CCCCCC
Q 021388 305 NKPLLT 310 (313)
Q Consensus 305 g~~~~~ 310 (313)
|+++..
T Consensus 337 g~~~~~ 342 (364)
T 2j6i_A 337 GKFDYR 342 (364)
T ss_dssp TCCCCC
T ss_pred CCCCCC
Confidence 994433
No 25
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1e-64 Score=483.61 Aligned_cols=295 Identities=23% Similarity=0.376 Sum_probs=260.6
Q ss_pred HHHHhc-CcEEEeecCCChHHHHHhccCCceEEEEeC--CCCCCHHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEE
Q 021388 18 QELERR-FNLFKFWTVSDKTQFLKAQQNNIRAVVGNA--TAGADAELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVT 94 (313)
Q Consensus 18 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~ 94 (313)
+.|++. +++....+.+..++++.+.+.++|+++++. ..++++++++++|+||||++.++|+||||++++.++||.|+
T Consensus 61 ~~l~~~g~~v~~~~~~~~~~~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~ 140 (393)
T 2nac_A 61 KYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVA 140 (393)
T ss_dssp HHHHHTTCEEEEESCCSSTTSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEE
T ss_pred HHHHhCCCEEEEecCCCCCHHHHHHhccCCCEEEEcCccCCCCCHHHHhhCCCCcEEEEcCccccccCHHHHhcCCEEEE
Confidence 456554 344433333233444556788999999853 35799999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC-cccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEe
Q 021388 95 NTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD-YKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYY 173 (313)
Q Consensus 95 n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~-~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~ 173 (313)
|+|++++.+||||++++||++.|++..+++.+++|.|.... ...+.++.|++|||||+|.||+.+|+++++|||+|++|
T Consensus 141 n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~ 220 (393)
T 2nac_A 141 EVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYT 220 (393)
T ss_dssp ECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEE
T ss_pred eCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEE
Confidence 99999999999999999999999999999999999997321 11356899999999999999999999999999999999
Q ss_pred cCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 174 SRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 174 ~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
|++..... +.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|.++|++|
T Consensus 221 d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 221 DRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp CSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred cCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence 99864321 3333468999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEecCCCCCCCCC-CcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 021388 249 RLGGAGLDVFENEPHVP-EELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPV 312 (313)
Q Consensus 249 ~l~ga~lDV~~~Ep~~~-~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 312 (313)
++.||++|||++||++. +|||++|||++|||+|+.|.++..++...+++||.+|++|+++.+.|
T Consensus 301 ~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~ 365 (393)
T 2nac_A 301 RLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEY 365 (393)
T ss_dssp SEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGG
T ss_pred CeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCccee
Confidence 99999999999999875 49999999999999999999999999999999999999999988765
No 26
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1.3e-63 Score=470.29 Aligned_cols=312 Identities=24% Similarity=0.317 Sum_probs=269.6
Q ss_pred CCceEEEEeCCCC-hhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCC
Q 021388 1 MESIGVLMACPMN-TYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLD 79 (313)
Q Consensus 1 m~~~~vl~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d 79 (313)
|+||+|++.+... +..++.++..+++..+ +....+++.++...++|+++++...++++++++++|+||||++.++|+|
T Consensus 19 ~~kp~i~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d 97 (347)
T 1mx3_A 19 SHMPLVALLDGRDCTVEMPILKDVATVAFC-DAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFD 97 (347)
T ss_dssp --CCEEEESSCSCCTTTHHHHTTTCEEEEC-CCSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSCCEEEESSSCCT
T ss_pred CCCCEEEEEcCCcchhhHHHhhccceEEec-CCCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCCCEEEEcccccC
Confidence 4689999987532 2235667666655544 3334444444434678888887777899999999999999999999999
Q ss_pred cCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCc-----cc-ccccCCCEEEEEcCC
Q 021388 80 KVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDY-----KL-TTKFTGKTVGIIGLG 153 (313)
Q Consensus 80 ~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~-----~~-~~~l~g~~igiiG~G 153 (313)
++|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..... .. +.++.|++|||||+|
T Consensus 98 ~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G 177 (347)
T 1mx3_A 98 NIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLG 177 (347)
T ss_dssp TBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCS
T ss_pred cccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeEC
Confidence 999999999999999999999999999999999999999999999999999963210 01 258999999999999
Q ss_pred hHHHHHHHHHHhCCCCEEEecCCCCCcc----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEE
Q 021388 154 RIGMAVAKRAEAFSCPINYYSRTEKPNL----KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLIN 229 (313)
Q Consensus 154 ~iG~~iA~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn 229 (313)
.||+.+|+++++||++|++||++..... +.....++++++++||+|++|+|++++|+++++++.|+.||+|++|||
T Consensus 178 ~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN 257 (347)
T 1mx3_A 178 RVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVN 257 (347)
T ss_dssp HHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEE
Confidence 9999999999999999999998765321 233345899999999999999999999999999999999999999999
Q ss_pred cCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCC--CcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 021388 230 IGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVP--EELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKP 307 (313)
Q Consensus 230 ~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~--~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~ 307 (313)
+|||+++|+++|.++|++|++.||++|||+.||++. +|||.+||+++|||+|++|.++..++.+.+++||.+|++|++
T Consensus 258 ~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~~ 337 (347)
T 1mx3_A 258 TARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRI 337 (347)
T ss_dssp CSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999863 589999999999999999999999999999999999999987
Q ss_pred CC---CCCC
Q 021388 308 LL---TPVV 313 (313)
Q Consensus 308 ~~---~~v~ 313 (313)
+. |.||
T Consensus 338 ~~~l~~~v~ 346 (347)
T 1mx3_A 338 PDSLKNCVN 346 (347)
T ss_dssp TTTCSSBCC
T ss_pred CcccCCCCC
Confidence 64 6665
No 27
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=5.4e-63 Score=467.02 Aligned_cols=311 Identities=27% Similarity=0.425 Sum_probs=271.8
Q ss_pred CCceEEEEeCC-CC--hhHHHHHHhcCcEEEeecCCChHHHHHhccC-----CceEEEEe------CCCCCCHHHHhhCC
Q 021388 1 MESIGVLMACP-MN--TYLEQELERRFNLFKFWTVSDKTQFLKAQQN-----NIRAVVGN------ATAGADAELIDALP 66 (313)
Q Consensus 1 m~~~~vl~~~~-~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~------~~~~~~~~~l~~~~ 66 (313)
|+||+||++++ +. +...+.|.+.+++..+. ....+++. +.++ ++|+++.+ ...++++++++++|
T Consensus 1 m~~~~vl~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~ 78 (348)
T 2w2k_A 1 MPRPRVLLLGDPARHLDDLWSDFQQKFEVIPAN-LTTHDGFK-QALREKRYGDFEAIIKLAVENGTESYPWNADLISHLP 78 (348)
T ss_dssp -CCCEEEECSSCCSSCHHHHHHHHHHSEEEECC-CCCHHHHH-HHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSC
T ss_pred CCCcEEEEECCccccChHHHHHHHhcceEEecC-CCCHHHHH-HHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcc
Confidence 78899999887 43 45667787777765443 23344443 4443 88998874 24579999999998
Q ss_pred -CccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCC---CCCCC---cccc
Q 021388 67 -KLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGK---WKKGD---YKLT 139 (313)
Q Consensus 67 -~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~---w~~~~---~~~~ 139 (313)
+||||++.++|+|++|++++.++||.|+|+||+++.+||||++++||+++|++.++++.+++|. |.+.. ...+
T Consensus 79 ~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~ 158 (348)
T 2w2k_A 79 SSLKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSA 158 (348)
T ss_dssp TTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTC
T ss_pred cCceEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccC
Confidence 6999999999999999999999999999999999999999999999999999999999999999 94211 1246
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHH-hCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhccc
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHII 213 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~-~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li 213 (313)
.++.|++|||||+|.||+.+|++++ ++|++|++||++..... +.....++++++++||+|++|+|.+++|++++
T Consensus 159 ~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li 238 (348)
T 2w2k_A 159 HNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLI 238 (348)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCB
T ss_pred cCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHh
Confidence 7899999999999999999999999 99999999999875321 33334589999999999999999999999999
Q ss_pred CHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHH
Q 021388 214 NREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMAD 293 (313)
Q Consensus 214 ~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~ 293 (313)
+++.++.||+|++|||++||+++|+++|.++|++|++.||++|||++||.+..+|+++|||++|||+|+.|.++..++.+
T Consensus 239 ~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~ 318 (348)
T 2w2k_A 239 DEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIETFHEFER 318 (348)
T ss_dssp CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEEECCSCTTCSHHHHHHHHH
T ss_pred hHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEEEcCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999995445899999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCC
Q 021388 294 LVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 294 ~~~~nl~~~~~g~~~~~~v~ 313 (313)
.+++||.+|++|+++.++||
T Consensus 319 ~~~~ni~~~~~g~~~~~~v~ 338 (348)
T 2w2k_A 319 LTMTNIDRFLLQGKPLLTPA 338 (348)
T ss_dssp HHHHHHHHHHHTCCCCSSBC
T ss_pred HHHHHHHHHHcCCCCcceec
Confidence 99999999999999988886
No 28
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-62 Score=462.09 Aligned_cols=307 Identities=30% Similarity=0.501 Sum_probs=275.4
Q ss_pred ceEEEEeCCCChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcCC
Q 021388 3 SIGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVD 82 (313)
Q Consensus 3 ~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 82 (313)
|++||+++++.+...+.|.+.+++..+ . ..+++++.+.++++|++++++..++++++++++|+||||++.++|+|++|
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~-~-~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~id 79 (333)
T 2d0i_A 2 RPKVGVLLKMKREALEELKKYADVEII-L-YPSGEELKGVIGRFDGIIVSPTTKITREVLENAERLKVISCHSAGYDNID 79 (333)
T ss_dssp CSEEEECSCCCHHHHHHHHTTSEEEEC-C-SCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTCTTCCEEEESSSCCTTBC
T ss_pred CcEEEEECCCCHHHHHHHHhcCCEEEe-C-CCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhCCCceEEEECCccccccc
Confidence 578999988888888888887765443 2 22344455668899999987777899999999999999999999999999
Q ss_pred hhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC-cccc----cccCCCEEEEEcCChHHH
Q 021388 83 MVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD-YKLT----TKFTGKTVGIIGLGRIGM 157 (313)
Q Consensus 83 ~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~-~~~~----~~l~g~~igiiG~G~iG~ 157 (313)
++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.+.. ...+ .++.|++|||||+|.||+
T Consensus 80 ~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~ 159 (333)
T 2d0i_A 80 LEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGK 159 (333)
T ss_dssp HHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHH
T ss_pred HHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHH
Confidence 99999999999999999999999999999999999999999999999996311 1134 689999999999999999
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcc----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 158 AVAKRAEAFSCPINYYSRTEKPNL----KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 158 ~iA~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
.+|++++++|++|++||++++... +.. ..++++++++||+|++|+|.+++|+++++++.++.||+| ++||+|||
T Consensus 160 ~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg 237 (333)
T 2d0i_A 160 AIARRLIPFGVKLYYWSRHRKVNVEKELKAR-YMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRG 237 (333)
T ss_dssp HHHHHHGGGTCEEEEECSSCCHHHHHHHTEE-ECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCG
T ss_pred HHHHHHHHCCCEEEEECCCcchhhhhhcCce-ecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCC
Confidence 999999999999999999876421 222 248999999999999999999999999999999999999 99999999
Q ss_pred ccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCC-ceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 021388 234 PHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLE-NVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPV 312 (313)
Q Consensus 234 ~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~p-nv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 312 (313)
.++|+++|.++|+++++.||++|||++||++.+|||++| ||++|||+|+.|.++..++.+.+++|+.+|++|+++.+.|
T Consensus 238 ~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v 317 (333)
T 2d0i_A 238 ALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVPEDLV 317 (333)
T ss_dssp GGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCCTTBS
T ss_pred cccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcCcc
Confidence 999999999999999999999999999998766999999 9999999999999999999999999999999999998888
Q ss_pred C
Q 021388 313 V 313 (313)
Q Consensus 313 ~ 313 (313)
|
T Consensus 318 ~ 318 (333)
T 2d0i_A 318 N 318 (333)
T ss_dssp C
T ss_pred C
Confidence 6
No 29
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=6.5e-62 Score=456.74 Aligned_cols=312 Identities=32% Similarity=0.502 Sum_probs=276.5
Q ss_pred CCceEEEEeCCCChhHHHHHHhc--CcEEEeec-CCChHHHHHhccCCceEEEEeCCCCCCHHHHhhC-CCccEEEEcCc
Q 021388 1 MESIGVLMACPMNTYLEQELERR--FNLFKFWT-VSDKTQFLKAQQNNIRAVVGNATAGADAELIDAL-PKLEIVSSFSV 76 (313)
Q Consensus 1 m~~~~vl~~~~~~~~~~~~l~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~Lk~i~~~~~ 76 (313)
|.|++||+++++.+...+.|++. +++..+.. .+.+++++.+.++++|++++++..++++++++++ |+||||++.++
T Consensus 6 ~~~~~il~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~ 85 (330)
T 2gcg_A 6 VRLMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSV 85 (330)
T ss_dssp -CCEEEEESSCCCHHHHHHHHHCTTEEEEECCSSSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESSS
T ss_pred CCCCEEEEECCCCHHHHHHHHhcCCceEEEecCCCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECCc
Confidence 34689999988888888888876 55443321 1223455566778999999877778999999999 99999999999
Q ss_pred CCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCC--CcccccccCCCEEEEEcCCh
Q 021388 77 GLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKG--DYKLTTKFTGKTVGIIGLGR 154 (313)
Q Consensus 77 G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~--~~~~~~~l~g~~igiiG~G~ 154 (313)
|+|++|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|... ....+.++.|++|||||+|.
T Consensus 86 G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~ 165 (330)
T 2gcg_A 86 GIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGR 165 (330)
T ss_dssp CCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSH
T ss_pred ccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCH
Confidence 9999999999999999999999999999999999999999999999999999999631 11246789999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEE
Q 021388 155 IGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLIN 229 (313)
Q Consensus 155 iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn 229 (313)
||+.+|++++++|++|++||++.... .+.... ++++++++||+|++|+|.+++++++++++.++.||+|+++||
T Consensus 166 iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn 244 (330)
T 2gcg_A 166 IGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFIN 244 (330)
T ss_dssp HHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEE
Confidence 99999999999999999999876432 122233 899999999999999999999999999999999999999999
Q ss_pred cCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCC-cccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 021388 230 IGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPE-ELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPL 308 (313)
Q Consensus 230 ~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~-~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~ 308 (313)
++||+++|+++|.++|++|++.||++|||++||++.+ |||++|||++|||+|+.|.++..++...+++|+.+|++|+++
T Consensus 245 ~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~ 324 (330)
T 2gcg_A 245 ISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPM 324 (330)
T ss_dssp CSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999997664 899999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 021388 309 LTPVV 313 (313)
Q Consensus 309 ~~~v~ 313 (313)
.+.||
T Consensus 325 ~~~v~ 329 (330)
T 2gcg_A 325 PSELK 329 (330)
T ss_dssp TTEEC
T ss_pred CCCCC
Confidence 98886
No 30
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.7e-62 Score=455.15 Aligned_cols=292 Identities=23% Similarity=0.346 Sum_probs=262.0
Q ss_pred eEEEEeCCCChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcCCh
Q 021388 4 IGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDM 83 (313)
Q Consensus 4 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~ 83 (313)
|+||+++++.+...+.|.+....+ . .+.++++|+++++. .+.++++++|+||||++.|+|+|++|+
T Consensus 1 m~il~~~~~~~~~~~~l~~~~~~v--~---------~~~~~~~d~~i~~~---~~~~~l~~~~~Lk~I~~~~~G~d~id~ 66 (303)
T 1qp8_A 1 MELYVNFELPPEAEEELRKYFKIV--R---------GGDLGNVEAALVSR---ITAEELAKMPRLKFIQVVTAGLDHLPW 66 (303)
T ss_dssp CEEECCSCCCHHHHHHHHTTCEEE--C---------SSCCTTBCCCCBSC---CCHHHHHHCTTCCCEEBSSSCCTTSCC
T ss_pred CEEEEccCCCHHHHHHHHhcCCcc--c---------hhhhCCCEEEEECC---CCHHHHhhCCCCcEEEECCcCcccccH
Confidence 378898888888888887652111 1 13467899998854 457999999999999999999999999
Q ss_pred hhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHH
Q 021388 84 VKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRA 163 (313)
Q Consensus 84 ~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l 163 (313)
+++ ++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.+.. ...++.|+++||||+|.||+.+|+++
T Consensus 67 ~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~--~~~~l~g~~vgIIG~G~IG~~~A~~l 143 (303)
T 1qp8_A 67 ESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDV--EIPLIQGEKVAVLGLGEIGTRVGKIL 143 (303)
T ss_dssp TTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCS--CCCCCTTCEEEEESCSTHHHHHHHHH
T ss_pred HHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCC--CCCCCCCCEEEEEccCHHHHHHHHHH
Confidence 885 799999999999999999999999999999999999999999997431 23479999999999999999999999
Q ss_pred HhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHH
Q 021388 164 EAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVS 243 (313)
Q Consensus 164 ~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~ 243 (313)
++||++|++|||++. ..+.....++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|.+
T Consensus 144 ~~~G~~V~~~dr~~~-~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~ 222 (303)
T 1qp8_A 144 AALGAQVRGFSRTPK-EGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLR 222 (303)
T ss_dssp HHTTCEEEEECSSCC-CSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHH
T ss_pred HHCCCEEEEECCCcc-ccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHH
Confidence 999999999999876 2233345689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeEEEecCC-CCCCCCC-CcccCCCceEEccCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 244 ALVEGRLGGAGLDVF-ENEPHVP-EELFGLENVVLMPHVGSG--TVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 244 al~~~~l~ga~lDV~-~~Ep~~~-~~L~~~pnv~lTPH~a~~--t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
+|++|++.||++||| ++||++. +|||++||+++|||+||. |.++++++.+.+++||.+|++|+++.+.||
T Consensus 223 aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~ 296 (303)
T 1qp8_A 223 ILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGGRPRNIAK 296 (303)
T ss_dssp HHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTSCCSCBCC
T ss_pred HHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceeC
Confidence 999999999999999 8899875 489999999999999998 999999999999999999999999999886
No 31
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=5e-62 Score=458.21 Aligned_cols=310 Identities=42% Similarity=0.631 Sum_probs=275.7
Q ss_pred ceEEEEeCCCChhHHHHHHhcCcEEEeecC-CChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcC
Q 021388 3 SIGVLMACPMNTYLEQELERRFNLFKFWTV-SDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKV 81 (313)
Q Consensus 3 ~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 81 (313)
+++||+++++.+...+.|.+.+++..+... +.+++++.+.++++|+++++...++++++++++|+||||++.|+|+|++
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~i 81 (334)
T 2dbq_A 2 KPKVFITREIPEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNI 81 (334)
T ss_dssp CCEEEESSCCCHHHHHHHHTTSEEEECCCSSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTCTTCCEEEESSSCCTTB
T ss_pred CcEEEEecCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhCCCceEEEECCcccccc
Confidence 457888888888888888877765543321 2244556677889999999777789999999999999999999999999
Q ss_pred ChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCC----CC--CcccccccCCCEEEEEcCChH
Q 021388 82 DMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWK----KG--DYKLTTKFTGKTVGIIGLGRI 155 (313)
Q Consensus 82 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~----~~--~~~~~~~l~g~~igiiG~G~i 155 (313)
|++++.++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|. .. ....+.++.|++|||||+|.|
T Consensus 82 d~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~i 161 (334)
T 2dbq_A 82 DIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRI 161 (334)
T ss_dssp CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHH
T ss_pred cHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHH
Confidence 999999999999999999999999999999999999999999999999995 11 112367899999999999999
Q ss_pred HHHHHHHHHhCCCCEEEecCCCCCc----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcC
Q 021388 156 GMAVAKRAEAFSCPINYYSRTEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 156 G~~iA~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
|+.+|++++++|++|++||++.+.. .+.. ..++++++++||+|++|+|.+++++++++++.++.||+|++|||+|
T Consensus 162 G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~-~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 162 GQAIAKRAKGFNMRILYYSRTRKEEVERELNAE-FKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHhCCCEEEEECCCcchhhHhhcCcc-cCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 9999999999999999999987641 1222 3589999999999999999999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q 021388 232 RGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTP 311 (313)
Q Consensus 232 rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~ 311 (313)
||.++|+++|.++|++|++.||++|||++||...+|||++|||++|||+|+.|.++..++.+.+++||.+|++|+++.+.
T Consensus 241 rg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~ 320 (334)
T 2dbq_A 241 RGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIPPTL 320 (334)
T ss_dssp CGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCCTTB
T ss_pred CCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCccc
Confidence 99999999999999999999999999999993345899999999999999999999999999999999999999999988
Q ss_pred CC
Q 021388 312 VV 313 (313)
Q Consensus 312 v~ 313 (313)
||
T Consensus 321 v~ 322 (334)
T 2dbq_A 321 VN 322 (334)
T ss_dssp SC
T ss_pred cC
Confidence 86
No 32
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=4.7e-61 Score=455.33 Aligned_cols=279 Identities=22% Similarity=0.307 Sum_probs=245.2
Q ss_pred ceEEEEeCCCChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcCC
Q 021388 3 SIGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVD 82 (313)
Q Consensus 3 ~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id 82 (313)
+||||+.+.+ +...+.+++..++..+...+.+. +.++++|++++++.+++++++++ .++||||++.|+|+||||
T Consensus 3 mmkIl~~~~~-p~~~~~~~~~~~v~~~~~~~~~~----~~l~~ad~li~~~~~~v~~~ll~-~~~Lk~I~~~~~G~D~iD 76 (381)
T 3oet_A 3 AMKILVDENM-PYARELFSRLGEVKAVPGRPIPV----EELNHADALMVRSVTKVNESLLS-GTPINFVGTATAGTDHVD 76 (381)
T ss_dssp CCEEEEETTS-TTHHHHHTTSSEEEEECC---CH----HHHTTCSEEEECTTSCBSHHHHT-TSCCCEEEESSSCCTTBC
T ss_pred ceEEEECCCC-cHHHHHHhhCCcEEEeCCCCCCH----HHHCCCEEEEECCCCCCCHHHHc-CCCCEEEEEccccccccC
Confidence 4789998765 55666666666554432221222 33689999999877889999999 567999999999999999
Q ss_pred hhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHH
Q 021388 83 MVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKR 162 (313)
Q Consensus 83 ~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~ 162 (313)
++++.++||.|+|+||+++.+||||+++++|++.|+. +.++.|++|||||+|+||+.+|++
T Consensus 77 ~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~-------------------g~~l~gktvGIIGlG~IG~~vA~~ 137 (381)
T 3oet_A 77 EAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD-------------------GFSLRDRTIGIVGVGNVGSRLQTR 137 (381)
T ss_dssp HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT-------------------TCCGGGCEEEEECCSHHHHHHHHH
T ss_pred HHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc-------------------CCccCCCEEEEEeECHHHHHHHHH
Confidence 9999999999999999999999999999999999863 346999999999999999999999
Q ss_pred HHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChh----hhcccCHHHHhccCCCcEEEEcCCCccccH
Q 021388 163 AEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEE----TRHIINREVIDALGPKGVLINIGRGPHVDE 238 (313)
Q Consensus 163 l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~----t~~li~~~~l~~mk~ga~lIn~~rg~~vd~ 238 (313)
+++|||+|++||++...........++++++++||+|++|+|++++ |+++++++.|+.||+|+++||+|||++||+
T Consensus 138 l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde 217 (381)
T 3oet_A 138 LEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDN 217 (381)
T ss_dssp HHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCH
T ss_pred HHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCH
Confidence 9999999999998644332233457899999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 021388 239 RELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKP 307 (313)
Q Consensus 239 ~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~ 307 (313)
++|+++|++|++.||+||||++||++.++||+++ +++|||+||+|.++..++..++++||.+|+.+.+
T Consensus 218 ~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~ 285 (381)
T 3oet_A 218 AALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQ 285 (381)
T ss_dssp HHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999888899875 8999999999999999999999999999998754
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=3.6e-60 Score=470.22 Aligned_cols=309 Identities=31% Similarity=0.451 Sum_probs=277.2
Q ss_pred CCceEEEEeCCCChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCc
Q 021388 1 MESIGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDK 80 (313)
Q Consensus 1 m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 80 (313)
|+||+||+++++.+...+.|++.+++..+ +. .+.+++.+.++++|++++++.+++++++++++|+||||++.|+|+||
T Consensus 2 m~~~~vl~~~~~~~~~~~~l~~~~~v~~~-~~-~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~ 79 (529)
T 1ygy_A 2 VSLPVVLIADKLAPSTVAALGDQVEVRWV-DG-PDRDKLLAAVPEADALLVRSATTVDAEVLAAAPKLKIVARAGVGLDN 79 (529)
T ss_dssp -CCCEEEECSSCCGGGGTTSCSSSEEEEC-CT-TSHHHHHHHGGGCSEEEECSSSCBCHHHHHTCTTCCEEEESSSCCTT
T ss_pred CCCcEEEEeCCCCHHHHHHHhcCceEEEc-CC-CCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhCCCCcEEEECCcCcCc
Confidence 67899999999888777777666554433 22 23444566788999999987788999999999999999999999999
Q ss_pred CChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHH
Q 021388 81 VDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVA 160 (313)
Q Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA 160 (313)
+|++++.++||.|+|+|++++.+||||+++++|++.|+++++++.+++|.|.+..+ .+.++.|+++||||+|.||+++|
T Consensus 80 id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~-~~~~l~g~~vgIIG~G~IG~~vA 158 (529)
T 1ygy_A 80 VDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSF-SGTEIFGKTVGVVGLGRIGQLVA 158 (529)
T ss_dssp BCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGC-CBCCCTTCEEEEECCSHHHHHHH
T ss_pred cCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCc-CccccCCCEEEEEeeCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999975433 46789999999999999999999
Q ss_pred HHHHhCCCCEEEecCCCCCc----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccc
Q 021388 161 KRAEAFSCPINYYSRTEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHV 236 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~v 236 (313)
++|+++|++|++||++.... .+... .++++++++||+|++|+|.+++|+++++++.++.||+|+++||++||+++
T Consensus 159 ~~l~~~G~~V~~~d~~~~~~~a~~~g~~~-~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv 237 (529)
T 1ygy_A 159 QRIAAFGAYVVAYDPYVSPARAAQLGIEL-LSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLV 237 (529)
T ss_dssp HHHHTTTCEEEEECTTSCHHHHHHHTCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSB
T ss_pred HHHHhCCCEEEEECCCCChhHHHhcCcEE-cCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchh
Confidence 99999999999999976421 13333 37999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 021388 237 DERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPLLTPVV 313 (313)
Q Consensus 237 d~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 313 (313)
|+++|.++|++|++.||++|||+.||...+|||++||+++|||+++.|.++.+++...+++|+.+|+.|+++.+.||
T Consensus 238 ~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~~~~v~ 314 (529)
T 1ygy_A 238 DEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVN 314 (529)
T ss_dssp CHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCS
T ss_pred hHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999999999877799999999999999999999999999999999999999998777664
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.6e-60 Score=438.64 Aligned_cols=279 Identities=24% Similarity=0.335 Sum_probs=244.0
Q ss_pred EEEEeCCCChhHHHHHHhc---CcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcC
Q 021388 5 GVLMACPMNTYLEQELERR---FNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKV 81 (313)
Q Consensus 5 ~vl~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~i 81 (313)
+|.+..++.....+...+. ++...+ +.++++|+++++ ...+ ++|+||||++.|+|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~ad~li~~-~~~~------~~~~Lk~I~~~~~G~d~i 63 (290)
T 3gvx_A 2 DVYVNFPADGHVREIAKTVLDGFDLHWY-----------PDYYDAEAQVIK-DRYV------LGKRTKMIQAISAGVDHI 63 (290)
T ss_dssp CEEECSCCCHHHHHHHHHHTTTSCEEET-----------TSCCCCSEEEES-SCCC------CCSSCCEEEECSSCCTTS
T ss_pred ceEEecCCcchHHHHHHHHhcccccccC-----------cchhhhhhhhhh-hhhh------hhhhhHHHHHHhcCCcee
Confidence 5677777776555444332 332221 446899999983 2332 789999999999999999
Q ss_pred ChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHH
Q 021388 82 DMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAK 161 (313)
Q Consensus 82 d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~ 161 (313)
|++++.+++|.++| +|.++.+||||+++++|++.|++..+++.+++|.|.+.. ..++.|++|||||+|.||+.+|+
T Consensus 64 d~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~---~~~l~g~tvGIIGlG~IG~~vA~ 139 (290)
T 3gvx_A 64 DVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSP---TTLLYGKALGILGYGGIGRRVAH 139 (290)
T ss_dssp CGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC---CCCCTTCEEEEECCSHHHHHHHH
T ss_pred ecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCC---ceeeecchheeeccCchhHHHHH
Confidence 99999887766555 588899999999999999999999999999999998542 36799999999999999999999
Q ss_pred HHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHH
Q 021388 162 RAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 241 (313)
Q Consensus 162 ~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al 241 (313)
++++|||+|++|||++..........++++++++||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|
T Consensus 140 ~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL 219 (290)
T 3gvx_A 140 LAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDM 219 (290)
T ss_dssp HHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHH
T ss_pred HHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcch
Confidence 99999999999999887655445566899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCC-CCcHHHHHHHHHHHHHHHHHHHcCCC
Q 021388 242 VSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVG-SGTVETRKTMADLVLGNLEAHFLNKP 307 (313)
Q Consensus 242 ~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a-~~t~~~~~~~~~~~~~nl~~~~~g~~ 307 (313)
+++|++|++.||++|||++||+ +|||++|||++|||+| ++|.++.+++.+.+++||.+|++|+-
T Consensus 220 ~~aL~~g~i~ga~lDV~~~EP~--~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 220 IGFLKERSDVWYLSDVWWNEPE--ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEG 284 (290)
T ss_dssp HHHHHHCTTCEEEESCCTTTTS--CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC---
T ss_pred hhhhhhccceEEeeccccCCcc--cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCC
Confidence 9999999999999999999998 8999999999999999 89999999999999999999999874
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.2e-58 Score=437.97 Aligned_cols=279 Identities=18% Similarity=0.273 Sum_probs=243.5
Q ss_pred eEEEEeCCCChhHHHHHHhcCcEEEeecCCChHHHHHhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcCCh
Q 021388 4 IGVLMACPMNTYLEQELERRFNLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDM 83 (313)
Q Consensus 4 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~ 83 (313)
|||++.+.+ +...+.+.+..++..+...+. ..+.++++|++++++.+++++++++ +|+||||++.++|+||+|+
T Consensus 1 mkil~~~~~-~~~~~~~~~~~~v~~~~~~~~----~~~~l~~ad~li~~~~~~~~~~~l~-~~~Lk~I~~~~~G~D~iD~ 74 (380)
T 2o4c_A 1 MRILADENI-PVVDAFFADQGSIRRLPGRAI----DRAALAEVDVLLVRSVTEVSRAALA-GSPVRFVGTCTIGTDHLDL 74 (380)
T ss_dssp CEEEEETTC-TTHHHHHGGGSEEEEECGGGC----STTTTTTCSEEEECTTSCBCHHHHT-TSCCCEEEECSSCSTTBCH
T ss_pred CEEEEecCc-hHHHHHHHhCCcEEEecCCcC----ChHHHCCcEEEEEcCCCCCCHHHhc-CCCceEEEEcCcccchhhH
Confidence 478887665 444566665555443321111 1234689999999877889999999 8999999999999999999
Q ss_pred hhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHH
Q 021388 84 VKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRA 163 (313)
Q Consensus 84 ~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l 163 (313)
+++.++||.|+|+||+++.+||||+++++|++.|+. +.++.|++|||||+|+||+.+|++|
T Consensus 75 ~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~-------------------~~~l~g~tvGIIGlG~IG~~vA~~l 135 (380)
T 2o4c_A 75 DYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR-------------------GADLAERTYGVVGAGQVGGRLVEVL 135 (380)
T ss_dssp HHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH-------------------TCCGGGCEEEEECCSHHHHHHHHHH
T ss_pred HHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh-------------------hcccCCCEEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999999999873 2469999999999999999999999
Q ss_pred HhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChh----hhcccCHHHHhccCCCcEEEEcCCCccccHH
Q 021388 164 EAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEE----TRHIINREVIDALGPKGVLINIGRGPHVDER 239 (313)
Q Consensus 164 ~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~----t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~ 239 (313)
++||++|++||++...........++++++++||+|++|+|++++ |+++++++.++.||+|+++||+|||+++|++
T Consensus 136 ~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~ 215 (380)
T 2o4c_A 136 RGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQ 215 (380)
T ss_dssp HHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHH
T ss_pred HHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHH
Confidence 999999999998654221112356899999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 021388 240 ELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLGNLEAHFLNKPL 308 (313)
Q Consensus 240 al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~nl~~~~~g~~~ 308 (313)
+|+++|++|++.||+||||++||+++++|++ +||++|||+||+|.++..++...+++|+.+|++|++.
T Consensus 216 aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~ 283 (380)
T 2o4c_A 216 ALRRLLEGGADLEVALDVWEGEPQADPELAA-RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAER 283 (380)
T ss_dssp HHHHHHHTTCCEEEEESCCTTTTSCCHHHHT-TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHhCCCceEEeeeeccCCCCchhhcc-CCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999987778887 5999999999999999999999999999999999863
No 36
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=5.5e-37 Score=299.02 Aligned_cols=222 Identities=15% Similarity=0.179 Sum_probs=188.7
Q ss_pred CCccEEE-EcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCC
Q 021388 66 PKLEIVS-SFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTG 144 (313)
Q Consensus 66 ~~Lk~i~-~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g 144 (313)
|+++.|+ ..++|+|++ +++.++||.++|++++++ +|||+. +|++....+....| |.+ ..+.++.|
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~~---~~g~~L~G 277 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IKR---ATDVMIAG 277 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HHH---HHCCCCTT
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hhh---ccccccCC
Confidence 7899998 889999988 789999999999999999 999953 46665555555555 753 13567999
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
+++||||+|.||+.+|+++++||++|++||+++... .++. ..++++++++||+|++|+ .|+++|+++.|+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~-~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~ 352 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYR-VVTMEYAADKADIFVTAT----GNYHVINHDHMK 352 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCE-ECCHHHHTTTCSEEEECS----SSSCSBCHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCE-eCCHHHHHhcCCEEEECC----CcccccCHHHHh
Confidence 999999999999999999999999999999987532 1222 358999999999999997 488999999999
Q ss_pred ccCCCcEEEEcCCCcc-ccHHHHHHHHHhCCeeEEEecCCCCCCCCC-CcccCC--CceEEccCCC-CCcHH-HHHHHHH
Q 021388 220 ALGPKGVLINIGRGPH-VDERELVSALVEGRLGGAGLDVFENEPHVP-EELFGL--ENVVLMPHVG-SGTVE-TRKTMAD 293 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~-vd~~al~~al~~~~l~ga~lDV~~~Ep~~~-~~L~~~--pnv~lTPH~a-~~t~~-~~~~~~~ 293 (313)
.||+|++|||+|||++ ||+++| ++|++|+|+ +++|+ ||+++ +|||.+ |||++| |+| +++.+ ...++..
T Consensus 353 ~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~ 426 (494)
T 3d64_A 353 AMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNSFTN 426 (494)
T ss_dssp HCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHHHHH
T ss_pred hCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHHHHH
Confidence 9999999999999999 699999 999999997 44554 57655 489888 999999 999 66754 6788999
Q ss_pred HHHHHHHHHHcCCCCCCCC
Q 021388 294 LVLGNLEAHFLNKPLLTPV 312 (313)
Q Consensus 294 ~~~~nl~~~~~g~~~~~~v 312 (313)
.+++|+.+|++|+++.+.|
T Consensus 427 ~~~~ni~~~~~g~~~~n~V 445 (494)
T 3d64_A 427 QTLAQIELFTRGGEYANKV 445 (494)
T ss_dssp HHHHHHHHHHHGGGSCSSE
T ss_pred HHHHHHHHHHcCCCCCCce
Confidence 9999999999999988876
No 37
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=1.2e-36 Score=295.51 Aligned_cols=225 Identities=13% Similarity=0.137 Sum_probs=195.0
Q ss_pred CCCccEEE-EcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccC
Q 021388 65 LPKLEIVS-SFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFT 143 (313)
Q Consensus 65 ~~~Lk~i~-~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~ 143 (313)
+|+++.|+ .+++|+|++ +++.++||.++|++++++ +|+| +++|++....+.++.| |.+. .+.++.
T Consensus 191 ~~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r~---~~~~l~ 256 (479)
T 1v8b_A 191 AKKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMRA---TDFLIS 256 (479)
T ss_dssp HTTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHHH---HCCCCT
T ss_pred hcCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhhc---cccccC
Confidence 47899998 889999998 789999999999999999 9999 4568888777777777 8631 356799
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHH
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVI 218 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l 218 (313)
|+++||||+|.||+.+|+++++||++|++||+++... .++ ...++++++++||+|++|+ .|+++|+++.|
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~-~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l 331 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVVTLDEIVDKGDFFITCT----GNVDVIKLEHL 331 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EECCHHHHTTTCSEEEECC----SSSSSBCHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCC-EecCHHHHHhcCCEEEECC----ChhhhcCHHHH
Confidence 9999999999999999999999999999999987532 223 2458999999999999995 58899999999
Q ss_pred hccCCCcEEEEcCCCcc-ccHHHHHH--HHHhCCeeEEEecCCCCCCCCCCcccCC--CceEEccCCC-CCcHH-HHHHH
Q 021388 219 DALGPKGVLINIGRGPH-VDERELVS--ALVEGRLGGAGLDVFENEPHVPEELFGL--ENVVLMPHVG-SGTVE-TRKTM 291 (313)
Q Consensus 219 ~~mk~ga~lIn~~rg~~-vd~~al~~--al~~~~l~ga~lDV~~~Ep~~~~~L~~~--pnv~lTPH~a-~~t~~-~~~~~ 291 (313)
+.||+|++|||+|||++ ||+++|.+ +|++|+|+ +++|||+.++ .+|||.+ |||++| |+| +++.+ ....+
T Consensus 332 ~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~--~~~l~~l~~~nvv~t-H~atghp~e~~~~s~ 407 (479)
T 1v8b_A 332 LKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPN--GNKIIVLARGRLLNL-GCATGHPAFVMSFSF 407 (479)
T ss_dssp TTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTT--SCEEEEEGGGSBHHH-HSSCCSCHHHHHHHH
T ss_pred hhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCC--CCeeeEecCCCEEEE-eccCCCCchhHHHHH
Confidence 99999999999999999 99999999 99999998 8999983322 3588888 999999 999 66755 67888
Q ss_pred HHHHHHHHHHHHcCC--CCCCCC
Q 021388 292 ADLVLGNLEAHFLNK--PLLTPV 312 (313)
Q Consensus 292 ~~~~~~nl~~~~~g~--~~~~~v 312 (313)
...+++|+..|++|+ ++.+.|
T Consensus 408 a~~~~~ni~~~~~g~~~~l~n~V 430 (479)
T 1v8b_A 408 CNQTFAQLDLWQNKDTNKYENKV 430 (479)
T ss_dssp HHHHHHHHHHHHTTTSSSCCSSE
T ss_pred HHHHHHHHHHHHcCCCCcCCcce
Confidence 899999999999999 887755
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.96 E-value=2e-29 Score=232.25 Aligned_cols=204 Identities=14% Similarity=0.190 Sum_probs=162.0
Q ss_pred CCceEEEEeCCCC--hhHHHHHHhc-CcEEEeecCCC---------hHHHHHhccCCceEEEEe----------------
Q 021388 1 MESIGVLMACPMN--TYLEQELERR-FNLFKFWTVSD---------KTQFLKAQQNNIRAVVGN---------------- 52 (313)
Q Consensus 1 m~~~~vl~~~~~~--~~~~~~l~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~~---------------- 52 (313)
|++++|++.+... ....+.|.+. +++.. ...++ ..+.+.+.++++|+++.+
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~ 81 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISL-VGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSN 81 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEE-ESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCS
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEE-eccccccccccccccccchHHHHhcCCEEEeccccccCCceeeccccc
Confidence 6788988876422 3455667665 44443 22211 112234557789999985
Q ss_pred CCCCCCHHHHhhCCCccEEEEcCcCCCcCCh-hhhhhcCcEEEcCC------CCChHHHHHHHHHHHHHHHhchhHHHHH
Q 021388 53 ATAGADAELIDALPKLEIVSSFSVGLDKVDM-VKCKEKGVRVTNTP------DVLTDDVADLAIGLMLAVLRRLCESDRY 125 (313)
Q Consensus 53 ~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~-~~~~~~gI~v~n~~------~~~~~~vAE~al~~~L~~~r~~~~~~~~ 125 (313)
...++++++++.+|+||+|+ +|+|++|+ +++.++||.|+|++ ++++.+|||++++++|..
T Consensus 82 ~~~~~~~~~l~~~~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~---------- 148 (293)
T 3d4o_A 82 ESIVLTEEMIEKTPNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH---------- 148 (293)
T ss_dssp CCCBCCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred CCccchHHHHHhCCCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh----------
Confidence 23358999999999999997 89999998 89999999999998 889999999999998863
Q ss_pred HhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc--CCCHHHHhhcCCE
Q 021388 126 VRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY--YPSVVELASNCHI 198 (313)
Q Consensus 126 ~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~--~~~l~e~~~~aDv 198 (313)
.+.++.|+++||||+|.||+.+|++++++|++|++|||+.++.. +... ..+++++++++|+
T Consensus 149 ------------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDv 216 (293)
T 3d4o_A 149 ------------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDV 216 (293)
T ss_dssp ------------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSE
T ss_pred ------------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCE
Confidence 13468999999999999999999999999999999999865321 2221 2468899999999
Q ss_pred EEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcc
Q 021388 199 LVVACPLTEETRHIINREVIDALGPKGVLINIGRGPH 235 (313)
Q Consensus 199 V~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~ 235 (313)
|++|+|. ++++++.++.||+|+++||++||+.
T Consensus 217 Vi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 217 CINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred EEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 9999995 6888999999999999999999764
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.93 E-value=9.5e-27 Score=215.01 Aligned_cols=210 Identities=13% Similarity=0.223 Sum_probs=155.9
Q ss_pred CCceEEEEeCCC--ChhHHHHHHhc-CcEEEeecCCCh---------HHHHHhccCCceEEEEe----C----------C
Q 021388 1 MESIGVLMACPM--NTYLEQELERR-FNLFKFWTVSDK---------TQFLKAQQNNIRAVVGN----A----------T 54 (313)
Q Consensus 1 m~~~~vl~~~~~--~~~~~~~l~~~-~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~----~----------~ 54 (313)
|++++|++...- .....+.|.+. +++. +...++. .+.+.+.++++|+++.+ . .
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~-~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~ 83 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIY-LVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSN 83 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEE-EESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEE-EEeccccccccccceeccchHHHHhcCCEEEeccccccCCccccccccc
Confidence 567889887652 23455667665 4443 2222111 11234556789999972 1 3
Q ss_pred CC--CCHHHHhhCCCccEEEEcCcCCCcCC-hhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCC
Q 021388 55 AG--ADAELIDALPKLEIVSSFSVGLDKVD-MVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKW 131 (313)
Q Consensus 55 ~~--~~~~~l~~~~~Lk~i~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w 131 (313)
.+ ++++.++.+|++|+|+ +|+|++| ++++.++||.|+|+|+++ ++ ++.|+++.. .|.|
T Consensus 84 ~~~~~~~~~l~~~~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~~ 144 (300)
T 2rir_A 84 EEVVLKQDHLDRTPAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGTI 144 (300)
T ss_dssp SCEECCHHHHHTSCTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHHH
T ss_pred CCccchHHHHhhcCCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHHH
Confidence 45 7899999999999998 8999999 899999999999999974 33 334655543 2335
Q ss_pred CCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc--CCCHHHHhhcCCEEEEecC
Q 021388 132 KKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY--YPSVVELASNCHILVVACP 204 (313)
Q Consensus 132 ~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~--~~~l~e~~~~aDvV~~~lp 204 (313)
.......+.++.|+++||||+|.||+.+|++++++|++|++|||+.++.. +... ..+++++++++|+|++|+|
T Consensus 145 ~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p 224 (300)
T 2rir_A 145 MLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIP 224 (300)
T ss_dssp HHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCS
T ss_pred HHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCC
Confidence 31101135679999999999999999999999999999999999865321 2221 3578899999999999999
Q ss_pred CChhhhcccCHHHHhccCCCcEEEEcCCCcc
Q 021388 205 LTEETRHIINREVIDALGPKGVLINIGRGPH 235 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~ 235 (313)
. ++++++.++.||+|+++||++||+.
T Consensus 225 ~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 225 S-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp S-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred h-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 6 6788999999999999999999864
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.91 E-value=2.7e-26 Score=224.28 Aligned_cols=224 Identities=17% Similarity=0.166 Sum_probs=176.2
Q ss_pred CCccEE-EEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCC
Q 021388 66 PKLEIV-SSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTG 144 (313)
Q Consensus 66 ~~Lk~i-~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g 144 (313)
++++-+ -..++|+|++ .++.++||.++|+++.+. +|+|+. +|++.........+ |.+. .+..+.|
T Consensus 209 ~~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~-------~r~l~~~~~s~~~g-~~r~---~~~~l~G 274 (494)
T 3ce6_A 209 ESVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSK-------FDNKYGTRHSLIDG-INRG---TDALIGG 274 (494)
T ss_dssp HHCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHT-------THHHHHHHHHHHHH-HHHH---HCCCCTT
T ss_pred cCeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHH-------HhhhhhhhhhhhHH-HHhc---cCCCCCc
Confidence 345544 4789999998 678899999999999998 999953 34443333333222 4321 1236899
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
++|+|+|+|.||+.+|++++++|++|+++|+++... .++. ..+++++++.+|+|+.|++ +.++++.+.++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~ 349 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTVEEAIGDADIVVTATG----NKDIIMLEHIK 349 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECSS----SSCSBCHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecHHHHHhCCCEEEECCC----CHHHHHHHHHH
Confidence 999999999999999999999999999999987542 2333 3578899999999999976 56688889999
Q ss_pred ccCCCcEEEEcCCCcc-ccHHHHHH-HHHhCCeeEEEecCCCCCCCCC-CcccCCCceE----EccCCCCCcHHHHHHHH
Q 021388 220 ALGPKGVLINIGRGPH-VDERELVS-ALVEGRLGGAGLDVFENEPHVP-EELFGLENVV----LMPHVGSGTVETRKTMA 292 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~-vd~~al~~-al~~~~l~ga~lDV~~~Ep~~~-~~L~~~pnv~----lTPH~a~~t~~~~~~~~ 292 (313)
.||+|++++|+||+.. +|.++|.. +++++++. +.+|+++.++... -.++..+|++ +|||+++.+.+. +.
T Consensus 350 ~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~~~~~s---~~ 425 (494)
T 3ce6_A 350 AMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNS---FA 425 (494)
T ss_dssp HSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHH---HH
T ss_pred hcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCccccchHH---HH
Confidence 9999999999999999 99999988 88888887 5789886644222 2477889988 999999988765 37
Q ss_pred HHHHHHHHHHHcCCCCCCCC
Q 021388 293 DLVLGNLEAHFLNKPLLTPV 312 (313)
Q Consensus 293 ~~~~~nl~~~~~g~~~~~~v 312 (313)
..+.++++.|.+|+++.+.|
T Consensus 426 ~qa~~ai~~~~~g~~~~~~V 445 (494)
T 3ce6_A 426 NQTIAQIELWTKNDEYDNEV 445 (494)
T ss_dssp HHHHHHHHHHHTGGGCCSSE
T ss_pred HHHHHHHHHHHcCCCCCCEE
Confidence 78899999999988776543
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.90 E-value=3.6e-23 Score=196.90 Aligned_cols=245 Identities=13% Similarity=0.145 Sum_probs=177.0
Q ss_pred CChhHHHHHHhcCcEEEeecCC------ChHHHH----------HhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcC
Q 021388 12 MNTYLEQELERRFNLFKFWTVS------DKTQFL----------KAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFS 75 (313)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~------~~~~~~----------~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~ 75 (313)
+.|...+.|.+....+...... ..++.. ++.++++|+|+. ...++++++....++..++....
T Consensus 18 ltP~~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii~~-vk~p~~~e~~~l~~~~~l~~~~~ 96 (377)
T 2vhw_A 18 ITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLK-VKEPIAAEYGRLRHGQILFTFLH 96 (377)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEEEC-SSCCCGGGGGGCCTTCEEEECCC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEEEE-eCCCChHHHhhcCCCCEEEEEec
Confidence 6788888887763333332111 122222 133446888765 55667777777788888888888
Q ss_pred cCCCcCChhhhhhcCcEEE----------cCCCCChHHHHHHHHHHHHHHH-hchhHHHHHHhcCCCCCCCcccccccCC
Q 021388 76 VGLDKVDMVKCKEKGVRVT----------NTPDVLTDDVADLAIGLMLAVL-RRLCESDRYVRSGKWKKGDYKLTTKFTG 144 (313)
Q Consensus 76 ~G~d~id~~~~~~~gI~v~----------n~~~~~~~~vAE~al~~~L~~~-r~~~~~~~~~~~~~w~~~~~~~~~~l~g 144 (313)
.++|.-.++++.++||++. |.|.+ .+.||++..+++.+. |++. ....|.|.... . ..++.|
T Consensus 97 ~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~--s~~ae~ag~~a~~~a~r~l~----~~~~g~~~~~~-~-~~~l~g 168 (377)
T 2vhw_A 97 LAASRACTDALLDSGTTSIAYETVQTADGALPLL--APMSEVAGRLAAQVGAYHLM----RTQGGRGVLMG-G-VPGVEP 168 (377)
T ss_dssp GGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTT--HHHHHHHHHHHHHHHHHHTS----GGGTSCCCCTT-C-BTTBCC
T ss_pred ccCCHHHHHHHHHcCCeEEEeeeccccCCCcccc--CchHHHHHHHHHHHHHHHHH----HhcCCCccccc-C-CCCCCC
Confidence 8899999999999999997 55654 466799985554444 7663 23344432111 1 236899
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc------cccc------cCCCHHHHhhcCCEEEEec--CCChhhh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN------LKYK------YYPSVVELASNCHILVVAC--PLTEETR 210 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~------~~~~------~~~~l~e~~~~aDvV~~~l--p~~~~t~ 210 (313)
++++|+|+|.||+.+++.++++|++|+++|++++.. .+.. ...+++++++++|+|+.++ |.+ .+.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~ 247 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAP 247 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCc
Confidence 999999999999999999999999999999986532 1211 1235678889999999977 544 678
Q ss_pred cccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCC-CCCCC-CcccCCCceE--EccCCCCCcHH
Q 021388 211 HIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFEN-EPHVP-EELFGLENVV--LMPHVGSGTVE 286 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~-Ep~~~-~~L~~~pnv~--lTPH~a~~t~~ 286 (313)
++++++.++.||+|+++||+|.. .|. ||+. ||.+. .|++..+||+ +|||+++.+..
T Consensus 248 ~li~~~~l~~mk~g~~iV~va~~-------------~Gg-------v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 248 KLVSNSLVAHMKPGAVLVDIAID-------------QGG-------CFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPK 307 (377)
T ss_dssp CCBCHHHHTTSCTTCEEEEGGGG-------------TTC-------SBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHH
T ss_pred ceecHHHHhcCCCCcEEEEEecC-------------CCC-------ccccccCCCCCCCEEEECCEEEEecCCcchhhHH
Confidence 89999999999999999999931 111 6777 88654 4899999998 99999999865
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.83 E-value=1.9e-20 Score=177.56 Aligned_cols=270 Identities=16% Similarity=0.179 Sum_probs=173.2
Q ss_pred CChhHHHHHHhcCcEEEeecCC------ChHHHHH---------hccCCceEEEEeCCCCCCHHHHhhC-CCccEEEEcC
Q 021388 12 MNTYLEQELERRFNLFKFWTVS------DKTQFLK---------AQQNNIRAVVGNATAGADAELIDAL-PKLEIVSSFS 75 (313)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~l~~~-~~Lk~i~~~~ 75 (313)
+.|...+.|.+....+...... ..++... +.+ ++|+|+. ...++. +.++.+ +..++++...
T Consensus 18 l~P~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~-vk~p~~-~~~~~l~~~~~~~~~~~ 94 (369)
T 2eez_A 18 LTPGGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVK-VKEPLP-EEYGFLREGLILFTYLH 94 (369)
T ss_dssp SCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEEC-SSCCCG-GGGGGCCTTCEEEECCC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEE-ECCCCH-HHHhhcCCCcEEEEEec
Confidence 6788888887764333332111 1222221 145 7999885 344554 446775 7899999999
Q ss_pred cCCCcCChhhhhhcCcEEE---cCCCC-Ch----HHHHHHHH--HHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCC
Q 021388 76 VGLDKVDMVKCKEKGVRVT---NTPDV-LT----DDVADLAI--GLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGK 145 (313)
Q Consensus 76 ~G~d~id~~~~~~~gI~v~---n~~~~-~~----~~vAE~al--~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~ 145 (313)
.+.|..+++++.++||++. +.+.. .. .++++.+- +.+++ ++.+.... ...+.|..+ ..++.++
T Consensus 95 ~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a-~~~l~~~~--~g~~~~~~~----~~~l~~~ 167 (369)
T 2eez_A 95 LAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVG-AQFLEKPK--GGRGVLLGG----VPGVAPA 167 (369)
T ss_dssp GGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHH-HHHTSGGG--TSCCCCTTC----BTBBCCC
T ss_pred ccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHH-HHHHHHhc--CCCceecCC----CCCCCCC
Confidence 9999999999999999998 44432 11 45555444 33322 23232111 011223221 1368999
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc------cccc------cCCCHHHHhhcCCEEEEecCCCh-hhhcc
Q 021388 146 TVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN------LKYK------YYPSVVELASNCHILVVACPLTE-ETRHI 212 (313)
Q Consensus 146 ~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~------~~~~------~~~~l~e~~~~aDvV~~~lp~~~-~t~~l 212 (313)
+++|+|.|.||+.+++.++++|++|+++|++++.. .+.. ...+++++++.+|+|+.+++.+. .+..+
T Consensus 168 ~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~l 247 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKL 247 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchh
Confidence 99999999999999999999999999999986531 1111 12346678889999999998765 57788
Q ss_pred cCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCC-CCcccCCCceE---------EccCCCC
Q 021388 213 INREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHV-PEELFGLENVV---------LMPHVGS 282 (313)
Q Consensus 213 i~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~-~~~L~~~pnv~---------lTPH~a~ 282 (313)
+.++.++.||+|+++||++-. .| |+ +|++ ||.+ +.|++..+|+. +|||+|+
T Consensus 248 i~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as 308 (369)
T 2eez_A 248 VTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTST 308 (369)
T ss_dssp SCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGGSHHHHH
T ss_pred HHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHH
Confidence 899999999999999999822 12 44 9998 6644 34788899999 8899888
Q ss_pred C--cHHHHHHHHHHHHHHHHHHHcCCCCCC
Q 021388 283 G--TVETRKTMADLVLGNLEAHFLNKPLLT 310 (313)
Q Consensus 283 ~--t~~~~~~~~~~~~~nl~~~~~g~~~~~ 310 (313)
. +.+....+.+++.+++..++.++.+.+
T Consensus 309 ~~~~~~~~~~l~~l~~~g~~~~~~~~~l~~ 338 (369)
T 2eez_A 309 FALTNQTLPYVLKLAEKGLDALLEDAALLK 338 (369)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHSCHHHHT
T ss_pred HHHHHHHHHHHHHHHhcChhhhhcChHHhc
Confidence 5 567788899999888887877765443
No 43
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.81 E-value=3.6e-21 Score=184.79 Aligned_cols=155 Identities=17% Similarity=0.169 Sum_probs=123.5
Q ss_pred ccc-cCCCEEEEEcCChHHHHHHHHHHh-CCCCEEEecCCCCCccccccCCCHHHHhhcCCE-EEEecCCChhhhcccCH
Q 021388 139 TTK-FTGKTVGIIGLGRIGMAVAKRAEA-FSCPINYYSRTEKPNLKYKYYPSVVELASNCHI-LVVACPLTEETRHIINR 215 (313)
Q Consensus 139 ~~~-l~g~~igiiG~G~iG~~iA~~l~~-~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDv-V~~~lp~~~~t~~li~~ 215 (313)
+.+ ++|+++||+|+|+||+.+|+++++ ||++|++++++....... ...+++++++.+|. .++ +|+ ++|++ ++.
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~~~~-~gvdl~~L~~~~d~~~~l-~~l-~~t~~-i~~ 281 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNP-DGLNADEVLKWKNEHGSV-KDF-PGATN-ITN 281 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEEEE-EEECHHHHHHHHHHHSSS-TTC-TTSEE-ECH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccccCc-cCCCHHHHHHHHHhcCEe-ecC-ccCee-eCH
Confidence 446 999999999999999999999999 999999995433211111 11256776664443 222 566 56777 788
Q ss_pred HHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCC--cccCCCceEEccCC----C--------
Q 021388 216 EVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPE--ELFGLENVVLMPHV----G-------- 281 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~--~L~~~pnv~lTPH~----a-------- 281 (313)
+.|..||+ .++||++||++||+++ +++|+.+.|.+++ +||++++ +|++++||++|||+ |
T Consensus 282 ~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E 354 (419)
T 1gtm_A 282 EELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFE 354 (419)
T ss_dssp HHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHH
T ss_pred HHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcceeeeeh
Confidence 89999988 6999999999999999 6999999999876 8997653 89999999999999 5
Q ss_pred ---------CCcHHHHHHHHHHHHHHHHHHHc
Q 021388 282 ---------SGTVETRKTMADLVLGNLEAHFL 304 (313)
Q Consensus 282 ---------~~t~~~~~~~~~~~~~nl~~~~~ 304 (313)
+.+++...++.+.+.+|+.++++
T Consensus 355 ~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~ 386 (419)
T 1gtm_A 355 WVQNITGYYWTIEEVRERLDKKMTKAFYDVYN 386 (419)
T ss_dssp HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 55678888999999999998873
No 44
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.75 E-value=2.1e-18 Score=165.18 Aligned_cols=218 Identities=17% Similarity=0.199 Sum_probs=145.3
Q ss_pred CChhHHHHHHhcCcEEEeecCC-----ChHHHHHh----------ccCCceEEEEeCCCCCCHHHHhhC-CCccEEEEcC
Q 021388 12 MNTYLEQELERRFNLFKFWTVS-----DKTQFLKA----------QQNNIRAVVGNATAGADAELIDAL-PKLEIVSSFS 75 (313)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~----------~~~~~~~i~~~~~~~~~~~~l~~~-~~Lk~i~~~~ 75 (313)
+.|+..+.|.+....+...... -.++...+ ..+ +|+|+.. ..+ +++.++.+ |++++|+..+
T Consensus 25 ltP~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~-adiil~v-k~p-~~~~i~~l~~~~~li~~~~ 101 (401)
T 1x13_A 25 ATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQ-SEIILKV-NAP-LDDEIALLNPGTTLVSFIW 101 (401)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGS-SSEEECS-SCC-CHHHHTTCCTTCEEEECCC
T ss_pred CCHHHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhc-CCeEEEe-CCC-CHHHHHHhcCCCcEEEEec
Confidence 6788888887764334332111 12222221 233 8988863 333 56778887 6899999999
Q ss_pred cCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHH--HHHHhcC-----CCCCCCcccccccCCCEEE
Q 021388 76 VGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCES--DRYVRSG-----KWKKGDYKLTTKFTGKTVG 148 (313)
Q Consensus 76 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~--~~~~~~~-----~w~~~~~~~~~~l~g~~ig 148 (313)
.|+|+.|++++.++||++.+ .+.|+|++.++.|.+++.+... ...+..+ .|.........++.|++|+
T Consensus 102 ~~~d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ 176 (401)
T 1x13_A 102 PAQNPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVM 176 (401)
T ss_dssp GGGCHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEE
T ss_pred CCCCHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeeccCcCCCEEE
Confidence 99999999999999999974 3444454444432222222221 1122222 2211100001158899999
Q ss_pred EEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCC---------------------------CHHHHhhcC
Q 021388 149 IIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYP---------------------------SVVELASNC 196 (313)
Q Consensus 149 iiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~---------------------------~l~e~~~~a 196 (313)
|+|.|.||..+++.++++|++|+++|+++... .+..... ++.++++.+
T Consensus 177 ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~a 256 (401)
T 1x13_A 177 VIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEV 256 (401)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHHC
T ss_pred EECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999987532 1222111 367788899
Q ss_pred CEEEEe--cCCChhhhcccCHHHHhccCCCcEEEEcC--CCccccH
Q 021388 197 HILVVA--CPLTEETRHIINREVIDALGPKGVLINIG--RGPHVDE 238 (313)
Q Consensus 197 DvV~~~--lp~~~~t~~li~~~~l~~mk~ga~lIn~~--rg~~vd~ 238 (313)
|+|+.+ +|.. .+..+++++.++.||+|+++||++ ||+.++.
T Consensus 257 DvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 257 DIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp SEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred CEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 999999 5542 355788999999999999999999 8876654
No 45
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.70 E-value=4.9e-17 Score=155.60 Aligned_cols=153 Identities=18% Similarity=0.231 Sum_probs=116.1
Q ss_pred EEcCcCCCcCC-hhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEE
Q 021388 72 SSFSVGLDKVD-MVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGII 150 (313)
Q Consensus 72 ~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igii 150 (313)
=-+++|+..+. +.+..+.+|+|.|++....++..+...+..-++...+. +. .+.++.|+++||+
T Consensus 153 EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~------ra---------tg~~L~GktVgIi 217 (436)
T 3h9u_A 153 EETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK------RA---------TDVMIAGKTACVC 217 (436)
T ss_dssp ECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH------HH---------HCCCCTTCEEEEE
T ss_pred eccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHH------Hh---------cCCcccCCEEEEE
Confidence 34567776552 34456789999999876666544444443333332221 11 2456999999999
Q ss_pred cCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCc
Q 021388 151 GLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKG 225 (313)
Q Consensus 151 G~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga 225 (313)
|+|.||+.+|++|+++|++|+++|+++... .++. ..++++++++||+|+++ +.+.++|+++.|+.||+|+
T Consensus 218 G~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~-~~sL~eal~~ADVVilt----~gt~~iI~~e~l~~MK~gA 292 (436)
T 3h9u_A 218 GYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQ-VLLVEDVVEEAHIFVTT----TGNDDIITSEHFPRMRDDA 292 (436)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCHHHHTTTCSEEEEC----SSCSCSBCTTTGGGCCTTE
T ss_pred eeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCe-ecCHHHHHhhCCEEEEC----CCCcCccCHHHHhhcCCCc
Confidence 999999999999999999999999976432 1222 45899999999999963 4588899999999999999
Q ss_pred EEEEcCCCcc-ccHHHHHHH
Q 021388 226 VLINIGRGPH-VDERELVSA 244 (313)
Q Consensus 226 ~lIn~~rg~~-vd~~al~~a 244 (313)
+|||+|||.+ +|.++|.+.
T Consensus 293 IVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 293 IVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp EEEECSSSGGGBCHHHHHHH
T ss_pred EEEEeCCCCCccCHHHHHhh
Confidence 9999999997 999998764
No 46
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.69 E-value=1.9e-16 Score=150.89 Aligned_cols=218 Identities=10% Similarity=0.101 Sum_probs=142.6
Q ss_pred CChhHHHHHHhcCcEEEeecCC------ChHHHH----------HhccCCceEEEEeCCCCC----CHHHHhhCC-CccE
Q 021388 12 MNTYLEQELERRFNLFKFWTVS------DKTQFL----------KAQQNNIRAVVGNATAGA----DAELIDALP-KLEI 70 (313)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~------~~~~~~----------~~~~~~~~~i~~~~~~~~----~~~~l~~~~-~Lk~ 70 (313)
+.|+..+.|.+....+...... ..++.. .+.++++|+|+.. ..++ +++.++.++ .+++
T Consensus 18 l~P~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v-~~p~~~~~~~~~i~~l~~~~~~ 96 (384)
T 1l7d_A 18 ISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKV-QRPMTAEEGTDEVALIKEGAVL 96 (384)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEE-ECCCCGGGSCCGGGGSCTTCEE
T ss_pred CCHHHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEe-cCcccccCCHHHHHhhccCCEE
Confidence 6788888888764333332111 122222 2446789998875 3455 678899986 5899
Q ss_pred EEEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhc-----CCCCCCCcccc-cccCC
Q 021388 71 VSSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRS-----GKWKKGDYKLT-TKFTG 144 (313)
Q Consensus 71 i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~-----~~w~~~~~~~~-~~l~g 144 (313)
++....+.|+.+++++.++||.+++. +...+.+++..+. +|+..+.+ ..+..+.. +.|... ...+ .++.|
T Consensus 97 i~~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~-~~~~~~~l~g 172 (384)
T 1l7d_A 97 MCHLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPM-MMTAAGTVPP 172 (384)
T ss_dssp EEECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSC-EEETTEEECC
T ss_pred EEEecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccc-hhccCCCCCC
Confidence 99999999999999999999999974 1111111111221 12222211 11111111 222110 0001 36899
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccC---C----------------C----------HH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYY---P----------------S----------VV 190 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~---~----------------~----------l~ 190 (313)
++++|+|.|.+|..+++.++++|++|+++|+++... .+.... . + +.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~ 252 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVL 252 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHH
Confidence 999999999999999999999999999999987532 222111 0 1 67
Q ss_pred HHhhcCCEEEEec--CCChhhhcccCHHHHhccCCCcEEEEcC--CCcc
Q 021388 191 ELASNCHILVVAC--PLTEETRHIINREVIDALGPKGVLINIG--RGPH 235 (313)
Q Consensus 191 e~~~~aDvV~~~l--p~~~~t~~li~~~~l~~mk~ga~lIn~~--rg~~ 235 (313)
++++.+|+|+.++ |..+ +.++++++.++.||+|+++||++ ||+.
T Consensus 253 ~~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~ 300 (384)
T 1l7d_A 253 KELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGN 300 (384)
T ss_dssp HHHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred HHhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCC
Confidence 7888999999877 4332 45678899999999999999999 7653
No 47
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.65 E-value=2e-17 Score=158.63 Aligned_cols=208 Identities=17% Similarity=0.232 Sum_probs=155.6
Q ss_pred CCccEEEEcCcCCCcCChhhhh-----hcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCc--cc
Q 021388 66 PKLEIVSSFSVGLDKVDMVKCK-----EKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDY--KL 138 (313)
Q Consensus 66 ~~Lk~i~~~~~G~d~id~~~~~-----~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~--~~ 138 (313)
+.+++|...++|+|++++.... ++++.+++.+|.. .+++++.+..++.+.|++..... ...+.|..... ..
T Consensus 80 ~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~-~~~~~~~~~~a~~~~k~v~~~~~-~~~~~~s~a~~av~~ 157 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTL-DEALKIVFRRAINLGKRAREETR-ISEGAVSIGSAAVEL 157 (404)
T ss_dssp HHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHSS-TTCSCCSHHHHHHHH
T ss_pred hHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCc-hHHHHHHHHHHhhhhccCcchhh-hcCCCccHHHHHHHH
Confidence 4578899999999999998876 7899999998884 57999999999999999865432 22344531100 01
Q ss_pred c----cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc------cccc--cCCCHHHHhhcCCEEEEecCC
Q 021388 139 T----TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN------LKYK--YYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 139 ~----~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~------~~~~--~~~~l~e~~~~aDvV~~~lp~ 205 (313)
. .++.|++++|||+|.||+.+++.++.+|+ +|+++||+.++. .+.. ...++.+++..+|+|+.|+|.
T Consensus 158 a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 158 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred HHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC
Confidence 1 14789999999999999999999999999 899999987542 1222 124677888999999999874
Q ss_pred ChhhhcccCHHHHhc--cC----CCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCC-CCcccCCCceEE--
Q 021388 206 TEETRHIINREVIDA--LG----PKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHV-PEELFGLENVVL-- 276 (313)
Q Consensus 206 ~~~t~~li~~~~l~~--mk----~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~-~~~L~~~pnv~l-- 276 (313)
+ ..+++.+.++. || ++.++||++ +|.. .++++++|||++
T Consensus 238 ~---~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d 285 (404)
T 1gpj_A 238 P---HPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRT 285 (404)
T ss_dssp S---SCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEE
T ss_pred C---CceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEe
Confidence 4 45566666766 32 445566654 3543 457999999999
Q ss_pred ccCCCCCcHHHHH----------HHHHHHHHHHHHHHcCCC
Q 021388 277 MPHVGSGTVETRK----------TMADLVLGNLEAHFLNKP 307 (313)
Q Consensus 277 TPH~a~~t~~~~~----------~~~~~~~~nl~~~~~g~~ 307 (313)
+||+++.+.+..+ .+....++++..|+.+.+
T Consensus 286 ~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~~ 326 (404)
T 1gpj_A 286 IDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKLK 326 (404)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998887654 667777888888886643
No 48
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.64 E-value=1.7e-16 Score=151.71 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=86.8
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhccc
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHII 213 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li 213 (313)
+..+.||++||+|+|.||+.+|+++++||++|+++++++... .++. ..++++++++||+|+++. .|+++|
T Consensus 242 g~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~-vv~LeElL~~ADIVv~at----gt~~lI 316 (464)
T 3n58_A 242 DVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFE-VVTLDDAASTADIVVTTT----GNKDVI 316 (464)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE-ECCHHHHGGGCSEEEECC----SSSSSB
T ss_pred CCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCce-eccHHHHHhhCCEEEECC----CCcccc
Confidence 457999999999999999999999999999999999876421 2222 357999999999999864 378899
Q ss_pred CHHHHhccCCCcEEEEcCCCcc-ccHHHHHH
Q 021388 214 NREVIDALGPKGVLINIGRGPH-VDERELVS 243 (313)
Q Consensus 214 ~~~~l~~mk~ga~lIn~~rg~~-vd~~al~~ 243 (313)
+++.|+.||+|++|||+|||.+ +|.++|.+
T Consensus 317 ~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp CHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred CHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 9999999999999999999998 99988874
No 49
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.57 E-value=5.5e-15 Score=141.15 Aligned_cols=156 Identities=18% Similarity=0.259 Sum_probs=111.5
Q ss_pred CccEE-EEcCcCCCcC-ChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCC
Q 021388 67 KLEIV-SSFSVGLDKV-DMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTG 144 (313)
Q Consensus 67 ~Lk~i-~~~~~G~d~i-d~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g 144 (313)
+++-+ =-+++|+-.+ .+...-+..++|.|+.....++--+-.-+.--++...+. +. .+..+.|
T Consensus 156 ~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~------ra---------t~~~L~G 220 (435)
T 3gvp_A 156 KIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLK------RT---------TDMMFGG 220 (435)
T ss_dssp TCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHHHHH------HH---------HCCCCTT
T ss_pred hcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHHHHHH------Hh---------hCceecC
Confidence 44433 3456776654 233334568999999886666554432222222221111 11 1346999
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
++++|+|+|.||+.+|++|++||++|+++|+++... .++ ...+++++++++|+|++| +.|.++|+++.|+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~-~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~ 295 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGF-RLVKLNEVIRQVDIVITC----TGNKNVVTREHLD 295 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCHHHHTTTCSEEEEC----SSCSCSBCHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCC-EeccHHHHHhcCCEEEEC----CCCcccCCHHHHH
Confidence 999999999999999999999999999999876321 222 245799999999999995 4578899999999
Q ss_pred ccCCCcEEEEcCCCcc-ccHHHHH
Q 021388 220 ALGPKGVLINIGRGPH-VDERELV 242 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~-vd~~al~ 242 (313)
.||+|+++||+|||.+ +|.++|.
T Consensus 296 ~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 296 RMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp HSCTTEEEEECSSTTTTBTGGGGC
T ss_pred hcCCCcEEEEecCCCccCCHHHHH
Confidence 9999999999999998 7877664
No 50
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.55 E-value=5e-15 Score=136.52 Aligned_cols=111 Identities=15% Similarity=0.242 Sum_probs=98.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccC--HHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIIN--REV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~--~~~ 217 (313)
++||+||+|.||.+||++|...|++|.+|||++++. .+.....++.|+++.+|+|++|+|..++.+.++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 689999999999999999999999999999987643 3556678999999999999999999998888773 347
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecC
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDV 257 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV 257 (313)
++.+++|.++||+++.++-+.+.+.+.+++..+. .+|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEec
Confidence 8899999999999999999999999999999987 7775
No 51
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.54 E-value=1.5e-14 Score=133.11 Aligned_cols=111 Identities=14% Similarity=0.191 Sum_probs=95.2
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
++|||||+|.||.+||++|...|++|.+|||++++.. +.....++.|+++++|+|++|+|..+..+.++..+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5899999999999999999999999999999887533 44567889999999999999999888888888888999
Q ss_pred ccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecC
Q 021388 220 ALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDV 257 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV 257 (313)
.+++|.++||+++...-+.+.+.+.+.+..+. .+|.
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~lda 121 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVGA 121 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eecC
Confidence 99999999999999999999999999999988 6665
No 52
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.44 E-value=1.4e-13 Score=126.99 Aligned_cols=115 Identities=11% Similarity=0.061 Sum_probs=97.2
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCH
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~ 215 (313)
+...++|||||+|.||..+|+.|...|++|.+|||+++... +.....+++++++++|+|++++|....++.++.+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 45678999999999999999999999999999999876322 3445678999999999999999987778877753
Q ss_pred HHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecC
Q 021388 216 EVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDV 257 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV 257 (313)
+.+..+++|.++||++++...+.+++.+.+++..+. .+|.
T Consensus 86 ~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~--~vda 125 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH--YVKG 125 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE--EEEE
T ss_pred cchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe--EEec
Confidence 345668899999999999999999999999988776 5553
No 53
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.44 E-value=2e-13 Score=126.11 Aligned_cols=115 Identities=13% Similarity=0.114 Sum_probs=96.6
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhccc-
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHII- 213 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li- 213 (313)
.....++|||||+|.||..+|+.|...|++|.+|||+++... +.....+++++++++|+|++|+|....++.++
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 96 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVF 96 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHh
Confidence 345668999999999999999999999999999999876432 34456789999999999999999776777666
Q ss_pred -CHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEec
Q 021388 214 -NREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLD 256 (313)
Q Consensus 214 -~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lD 256 (313)
.++.+..+++|.++||+++..+...+.+.+.+.+..+. .+|
T Consensus 97 ~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~v~ 138 (310)
T 3doj_A 97 DKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR--FVE 138 (310)
T ss_dssp STTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred CchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEe
Confidence 35567889999999999999999999999999887766 445
No 54
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.42 E-value=2.7e-13 Score=125.84 Aligned_cols=114 Identities=16% Similarity=0.234 Sum_probs=97.0
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCH-
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINR- 215 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~- 215 (313)
...++|||||+|.||..+|+.|...|++|.+|||+++.. .+.....+++++++++|+|++++|.....+.++..
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 456799999999999999999999999999999987632 24445678999999999999999977777777643
Q ss_pred HHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecC
Q 021388 216 EVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDV 257 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV 257 (313)
+.++.+++|.++||++++.+.+.+.+.+.+++..+. .+|.
T Consensus 109 ~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~~ 148 (320)
T 4dll_A 109 GVAAAMKPGSLFLDMASITPREARDHAARLGALGIA--HLDT 148 (320)
T ss_dssp CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE--EEeC
Confidence 677889999999999999999999999999988776 4453
No 55
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.41 E-value=8.2e-13 Score=122.17 Aligned_cols=135 Identities=13% Similarity=0.139 Sum_probs=93.3
Q ss_pred HHHhcCCCC-CCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCC--CC-----ccccccCCCHHHHhh
Q 021388 124 RYVRSGKWK-KGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTE--KP-----NLKYKYYPSVVELAS 194 (313)
Q Consensus 124 ~~~~~~~w~-~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~--~~-----~~~~~~~~~l~e~~~ 194 (313)
++.+.+.|. +.+++.......++|||||+|.||..+|+.|...|+ +|.+||+++ +. ..+.....++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~ 82 (312)
T 3qsg_A 3 HHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAG 82 (312)
T ss_dssp ----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHH
T ss_pred cccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHh
Confidence 445566664 333333334456799999999999999999999999 999999973 22 124445678999999
Q ss_pred cCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhC--CeeEEEec--CCCCCC
Q 021388 195 NCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEG--RLGGAGLD--VFENEP 262 (313)
Q Consensus 195 ~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~--~l~ga~lD--V~~~Ep 262 (313)
+||+|++++|...... ++ ++..+.+++++++||+++......+++.+.+.+. .+. .+| |+.++|
T Consensus 83 ~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~--~vd~pv~g~~~ 150 (312)
T 3qsg_A 83 ECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQ--YAAVAVMSAVK 150 (312)
T ss_dssp HCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCE--EEEEEECSCST
T ss_pred cCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCe--EEeccccCCch
Confidence 9999999999776554 33 6778889999999999999999999999999876 554 445 455443
No 56
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.40 E-value=2.8e-12 Score=118.85 Aligned_cols=162 Identities=19% Similarity=0.217 Sum_probs=106.6
Q ss_pred cCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCc-----ccc--ccCCCHHH-HhhcCC
Q 021388 128 SGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPN-----LKY--KYYPSVVE-LASNCH 197 (313)
Q Consensus 128 ~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~-----~~~--~~~~~l~e-~~~~aD 197 (313)
.+.|.....+...++..++|||||+|.||+.+|+.|+..|+ +|.+||++++.. .+. ....++++ ++++||
T Consensus 17 ~~~~~~~~~~~~~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aD 96 (314)
T 3ggo_A 17 RGSHMKNIIKILKSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPD 96 (314)
T ss_dssp ------------CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCS
T ss_pred cccCcCcCCchhhhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCC
Confidence 34564333222334556899999999999999999999999 899999987532 122 22457788 899999
Q ss_pred EEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCC---CCC-CcccCCCc
Q 021388 198 ILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEP---HVP-EELFGLEN 273 (313)
Q Consensus 198 vV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep---~~~-~~L~~~pn 273 (313)
+|++|+|... +..++ ++....++++++++|++.......+++.+.+.. +..+ .--++..|- ... ..|++-..
T Consensus 97 vVilavp~~~-~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~-~hPm~G~e~sG~~~A~~~Lf~g~~ 172 (314)
T 3ggo_A 97 FVMLSSPVRT-FREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVG-GHPIAGTEKSGVEYSLDNLYEGKK 172 (314)
T ss_dssp EEEECSCGGG-HHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEEC-EEECCCCCCCSGGGCCTTTTTTCE
T ss_pred EEEEeCCHHH-HHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEe-cCcccCCcccchhhhhhhhhcCCE
Confidence 9999999543 44444 667788999999999998776556777777755 3322 223454442 111 25788889
Q ss_pred eEEccCCCCCcHHHHHHHHHH
Q 021388 274 VVLMPHVGSGTVETRKTMADL 294 (313)
Q Consensus 274 v~lTPH~a~~t~~~~~~~~~~ 294 (313)
+++||+-+ .+.+..+++.+.
T Consensus 173 ~il~~~~~-~~~~~~~~v~~l 192 (314)
T 3ggo_A 173 VILTPTKK-TDKKRLKLVKRV 192 (314)
T ss_dssp EEECCCTT-SCHHHHHHHHHH
T ss_pred EEEEeCCC-CCHHHHHHHHHH
Confidence 99999843 455555544433
No 57
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.39 E-value=5.8e-13 Score=122.21 Aligned_cols=106 Identities=18% Similarity=0.253 Sum_probs=93.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHH
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINREVI 218 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l 218 (313)
.++|||||+|.||..+|+.|...|++|.+|||+++... +.....+++++++ +|+|++|+|....++.++ ++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999999887532 3445678999999 999999999877777777 7788
Q ss_pred hccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 219 DALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 219 ~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+.+++|.++||+++....+.+.+.+.+.+..+.
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 125 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIH 125 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE
Confidence 899999999999999999999999999887766
No 58
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.39 E-value=9e-13 Score=124.29 Aligned_cols=117 Identities=15% Similarity=0.227 Sum_probs=97.9
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcC---CEEEEecCCChhhhccc
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNC---HILVVACPLTEETRHII 213 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~a---DvV~~~lp~~~~t~~li 213 (313)
+.+++|||||+|.||..+|+.|...|++|.+|||+++.. .+.....+++++++++ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 567899999999999999999999999999999987532 2444567899999999 9999999976 677776
Q ss_pred CHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCC
Q 021388 214 NREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFEN 260 (313)
Q Consensus 214 ~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~ 260 (313)
.+++..+++|.++||++++...+...+.+.+.+..+......|+..
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 6788889999999999999999999999999998887444444433
No 59
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.37 E-value=7.4e-13 Score=120.73 Aligned_cols=110 Identities=16% Similarity=0.282 Sum_probs=94.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhccc--CHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHII--NREV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li--~~~~ 217 (313)
++|||||+|.||..+|+.|...|++|.+|||+++... +.....+++++++++|+|++|+|....++.++ .++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999999876432 34456789999999999999999776777766 2567
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEec
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLD 256 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lD 256 (313)
++.+++|.++||+++....+.+.+.+.+++..+. .+|
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~--~~~ 118 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR--FLE 118 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE--EEE
Confidence 7889999999999999999999999999887766 444
No 60
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.36 E-value=1.2e-12 Score=119.35 Aligned_cols=111 Identities=16% Similarity=0.223 Sum_probs=93.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhccc--CHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHII--NREV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li--~~~~ 217 (313)
++|||||+|.||..+|+.|...|++|.+|||+++... +.....+++++++++|+|++++|....++.++ .++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4799999999999999999999999999999876432 34456789999999999999999776777665 2456
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecC
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDV 257 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV 257 (313)
++.+++|.++||++++...+.+.+.+.+.+..+. .+|.
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~--~~~~ 119 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR--FLEA 119 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEEC
Confidence 7889999999999999999999999999887766 4453
No 61
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.33 E-value=1.3e-12 Score=120.06 Aligned_cols=111 Identities=22% Similarity=0.211 Sum_probs=93.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----ccccc-CCCHHHHhhcCCEEEEecCCChhhhcccC--H
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKY-YPSVVELASNCHILVVACPLTEETRHIIN--R 215 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~-~~~l~e~~~~aDvV~~~lp~~~~t~~li~--~ 215 (313)
.++|||||+|.||..+|+.|...|++|.+|||+++.. .+... ..++++++++||+|++++|.+...+.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 4689999999999999999999999999999987532 23334 56888999999999999997767776653 4
Q ss_pred HHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEec
Q 021388 216 EVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLD 256 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lD 256 (313)
+.++.+++|.++||+++......+.+.+.+.+..+. .+|
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~--~~~ 125 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN--MLD 125 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE--EEE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe--EEe
Confidence 567889999999999999999999999999887665 445
No 62
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.33 E-value=8e-12 Score=113.29 Aligned_cols=142 Identities=18% Similarity=0.228 Sum_probs=102.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCc-----cccc--cCCCHHHHhh-cCCEEEEecCCChhhhcccC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPN-----LKYK--YYPSVVELAS-NCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~-----~~~~--~~~~l~e~~~-~aDvV~~~lp~~~~t~~li~ 214 (313)
++|||||+|.||..+|+.|+..|+ +|++||++++.. .+.. ...+++++++ ++|+|++|+|.. .+..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~- 79 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA- 79 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHH-
Confidence 589999999999999999999998 899999986532 1221 2346878888 999999999954 444555
Q ss_pred HHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCC---CC-CcccCCCceEEccCCCCCcHHHHHH
Q 021388 215 REVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPH---VP-EELFGLENVVLMPHVGSGTVETRKT 290 (313)
Q Consensus 215 ~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~---~~-~~L~~~pnv~lTPH~a~~t~~~~~~ 290 (313)
.+..+.++++++++|++++.....+.+.+.+.++-+. ...++..|.. .. .++++.++++++||.++. .+..+.
T Consensus 80 ~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~--~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~-~~~~~~ 156 (281)
T 2g5c_A 80 KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVG--GHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KKRLKL 156 (281)
T ss_dssp HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEEC--EEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC-HHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCcHHHHHHHHHhcccccee--eccccCCccCChhhhhhHHhCCCCEEEecCCCCC-HHHHHH
Confidence 4566789999999999998877778888888764221 1233444421 11 257788889999997654 444444
Q ss_pred H
Q 021388 291 M 291 (313)
Q Consensus 291 ~ 291 (313)
+
T Consensus 157 v 157 (281)
T 2g5c_A 157 V 157 (281)
T ss_dssp H
T ss_pred H
Confidence 3
No 63
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.31 E-value=3.7e-12 Score=118.06 Aligned_cols=132 Identities=12% Similarity=0.072 Sum_probs=94.6
Q ss_pred HHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCC-CCEEEecCCCC-------Cc-----cccccCC-C
Q 021388 123 DRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFS-CPINYYSRTEK-------PN-----LKYKYYP-S 188 (313)
Q Consensus 123 ~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G-~~V~~~~~~~~-------~~-----~~~~~~~-~ 188 (313)
+...+...|.+.-+ .. . -.++|||||+|.||..+|+.|...| ++|.+||++++ .. .+. .. +
T Consensus 6 ~~~~~~~~~~~~~~-~~-~-M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s 80 (317)
T 4ezb_A 6 HHSSGVDLGTENLY-FQ-S-MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLD 80 (317)
T ss_dssp ---------CCCHH-HH-T-SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEES
T ss_pred ccccccccCcccCc-cc-c-cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCC
Confidence 34444456764321 11 1 2378999999999999999999999 99999999862 10 122 45 7
Q ss_pred HHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCC
Q 021388 189 VVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENE 261 (313)
Q Consensus 189 l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~E 261 (313)
+.+++++||+|++++|.......+ ++.++.+++|.++||+++......+.+.+.+++..+.....-|+.++
T Consensus 81 ~~e~~~~aDvVi~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~ 151 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARV 151 (317)
T ss_dssp SGGGGGGCSEEEECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCS
T ss_pred HHHHHhcCCEEEEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCc
Confidence 889999999999999976655543 67888899999999999999999999999998876653222355543
No 64
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.31 E-value=2.9e-12 Score=117.51 Aligned_cols=110 Identities=15% Similarity=0.244 Sum_probs=93.2
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccC--HHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIIN--REV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~--~~~ 217 (313)
++|||||+|.||..+|+.|...|++|.+|||+++.. .+.....+++++++++|+|++|+|...+++.++. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999987532 2444567899999999999999997777777663 267
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEec
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLD 256 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lD 256 (313)
++.++++.++||++++.....+.+.+.+.+..+. .+|
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~--~~~ 120 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLD 120 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC--EEE
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE--EEE
Confidence 7889999999999999999999999999887665 455
No 65
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.29 E-value=1.2e-11 Score=113.43 Aligned_cols=136 Identities=17% Similarity=0.163 Sum_probs=90.7
Q ss_pred HHHHHHhcCCCCCCCcccccccCCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEE
Q 021388 121 ESDRYVRSGKWKKGDYKLTTKFTGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHIL 199 (313)
Q Consensus 121 ~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV 199 (313)
++...++...|.... ...++||||| +|.||..+|+.|+..|++|.+||+++.. +..+.+++||+|
T Consensus 4 ~~~~~~~~~~~~~~~------~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------~~~~~~~~aDvV 69 (298)
T 2pv7_A 4 ESYANENQFGFKTIN------SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------VAESILANADVV 69 (298)
T ss_dssp ---------CCCCSC------TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------GHHHHHTTCSEE
T ss_pred hHHhhhhccCccccC------CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------CHHHHhcCCCEE
Confidence 334455566786321 1346899999 9999999999999999999999987642 577889999999
Q ss_pred EEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCC--CCcccCCCceEEc
Q 021388 200 VVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHV--PEELFGLENVVLM 277 (313)
Q Consensus 200 ~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~--~~~L~~~pnv~lT 277 (313)
++|+|... +..++ +++...++++++++|+++......+++.+.+ ... +....|.. ..+++....++++
T Consensus 70 ilavp~~~-~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~---~~~-----~v~~hP~~g~~~~~~~g~~~~l~ 139 (298)
T 2pv7_A 70 IVSVPINL-TLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH---TGA-----VLGLHPMFGADIASMAKQVVVRC 139 (298)
T ss_dssp EECSCGGG-HHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC---SSE-----EEEEEECSCTTCSCCTTCEEEEE
T ss_pred EEeCCHHH-HHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc---CCC-----EEeeCCCCCCCchhhcCCeEEEe
Confidence 99999543 55565 4566779999999999887654445554443 122 12222321 1246666689999
Q ss_pred cCC
Q 021388 278 PHV 280 (313)
Q Consensus 278 PH~ 280 (313)
||-
T Consensus 140 ~~~ 142 (298)
T 2pv7_A 140 DGR 142 (298)
T ss_dssp EEE
T ss_pred cCC
Confidence 974
No 66
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.28 E-value=1.9e-11 Score=111.29 Aligned_cols=139 Identities=12% Similarity=0.166 Sum_probs=101.5
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc------------------------------cccCCCHHHHhh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK------------------------------YKYYPSVVELAS 194 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~------------------------------~~~~~~l~e~~~ 194 (313)
++|+|||.|.||..+|+.+...|++|.+||++++.... .....++++.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 68999999999999999999999999999998653110 123467888999
Q ss_pred cCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCce
Q 021388 195 NCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENV 274 (313)
Q Consensus 195 ~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv 274 (313)
+||+|+.++|.+.+.+..+-++..+.+++++++++.+.+ +...++.+++... .+..++..+. |.+..+.+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~-------p~~~~~lv 154 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN-------HVWVNNTA 154 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS-------STTTSCEE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC-------CcccCceE
Confidence 999999999988777766667788889999999965444 3456777777543 2334555442 44567788
Q ss_pred EEccCCCCCcHHHHHHHHHH
Q 021388 275 VLMPHVGSGTVETRKTMADL 294 (313)
Q Consensus 275 ~lTPH~a~~t~~~~~~~~~~ 294 (313)
.++||- ..+.+..++....
T Consensus 155 evv~~~-~t~~~~~~~~~~l 173 (283)
T 4e12_A 155 EVMGTT-KTDPEVYQQVVEF 173 (283)
T ss_dssp EEEECT-TSCHHHHHHHHHH
T ss_pred EEEeCC-CCCHHHHHHHHHH
Confidence 899983 3445555544443
No 67
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.27 E-value=4.5e-12 Score=123.76 Aligned_cols=114 Identities=15% Similarity=0.155 Sum_probs=95.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc--------c--cccCCCHHHHhh---cCCEEEEecCCChhhh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL--------K--YKYYPSVVELAS---NCHILVVACPLTEETR 210 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------~--~~~~~~l~e~~~---~aDvV~~~lp~~~~t~ 210 (313)
.++|||||+|.||..+|++|...|++|.+|||+++... + .....+++++++ ++|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 35799999999999999999999999999999876321 1 112468888887 4999999999887788
Q ss_pred cccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCC
Q 021388 211 HIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVF 258 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~ 258 (313)
.++ +++++.|++|.++||++++...+...+.+.+.+..+......|.
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVs 130 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVS 130 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCcc
Confidence 777 67889999999999999999999999999999988874433343
No 68
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.23 E-value=9.9e-11 Score=111.42 Aligned_cols=213 Identities=13% Similarity=0.134 Sum_probs=127.0
Q ss_pred CChhHHHHHHhcCcEEEeecCCC-----hHHHHH---------hccCCceEEEEeCCCCCCHHHHhhCC-CccEEEEcCc
Q 021388 12 MNTYLEQELERRFNLFKFWTVSD-----KTQFLK---------AQQNNIRAVVGNATAGADAELIDALP-KLEIVSSFSV 76 (313)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~i~~~~~~~~~~~~l~~~~-~Lk~i~~~~~ 76 (313)
+.|+..+.|.+....+....... ++++.. +.+.++|+|+.-. .+ +++.++.++ .--++...-.
T Consensus 43 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkVk-~p-~~~e~~~l~~g~~l~~~lh~ 120 (405)
T 4dio_A 43 GSVESVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKVR-RP-SAQEISGYRSGAVVIAIMDP 120 (405)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEEE-CC-CTTTGGGSCTTCEEEEECCC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEeC-CC-ChhHHhhcCCCcEEEEEecc
Confidence 66888888876633343332211 222221 2234578877532 22 334455554 4555655544
Q ss_pred CCCcCChhhhhhcCcEEEc---CCCCC-------hHHHHHHHHHHH-HHHHhchhHHHHHHhcCCCCCCCcccccccCCC
Q 021388 77 GLDKVDMVKCKEKGVRVTN---TPDVL-------TDDVADLAIGLM-LAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGK 145 (313)
Q Consensus 77 G~d~id~~~~~~~gI~v~n---~~~~~-------~~~vAE~al~~~-L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~ 145 (313)
.-|.=-++++.++||.... .+... -.+++|.+=.+. +..+..+ ++....-..-...+.+.
T Consensus 121 ~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~Av~~aa~~l---------~~~~~~l~t~~g~v~~~ 191 (405)
T 4dio_A 121 YGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQAVIDAAYEY---------DRALPMMMTAAGTVPAA 191 (405)
T ss_dssp TTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHC---------SSCSSCEEETTEEECCC
T ss_pred ccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHHHHHHHHHh---------HhhhchhhccCCCcCCC
Confidence 4443345677889998854 33211 134444432111 1111111 11110000001247899
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----ccccc-----------------------------CCCHHH
Q 021388 146 TVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKY-----------------------------YPSVVE 191 (313)
Q Consensus 146 ~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~-----------------------------~~~l~e 191 (313)
+|+|||+|.||..+++.++++|++|+++|+++... .+... ..++.+
T Consensus 192 kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e 271 (405)
T 4dio_A 192 KIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAE 271 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHH
Confidence 99999999999999999999999999999987531 11110 125678
Q ss_pred HhhcCCEEEEec--CCChhhhcccCHHHHhccCCCcEEEEcC--CCccc
Q 021388 192 LASNCHILVVAC--PLTEETRHIINREVIDALGPKGVLINIG--RGPHV 236 (313)
Q Consensus 192 ~~~~aDvV~~~l--p~~~~t~~li~~~~l~~mk~ga~lIn~~--rg~~v 236 (313)
.++++|+|+.++ |.. ....+++++.++.||+|+++||++ +|+.+
T Consensus 272 ~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~ 319 (405)
T 4dio_A 272 HIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNI 319 (405)
T ss_dssp HHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSB
T ss_pred HhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCc
Confidence 899999999885 533 356788999999999999999998 55543
No 69
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.22 E-value=2.1e-11 Score=119.20 Aligned_cols=109 Identities=16% Similarity=0.232 Sum_probs=91.8
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc---------ccccCCCHHHHhhc---CCEEEEecCCChhh
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL---------KYKYYPSVVELASN---CHILVVACPLTEET 209 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~l~e~~~~---aDvV~~~lp~~~~t 209 (313)
...++|||||+|.||+.+|++|...|++|.+|||+++... +.....++++++++ +|+|++++|....+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 5567899999999999999999999999999999865311 33445688898887 99999999987778
Q ss_pred hcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 210 RHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+.++ +++.+.+++|.++||++.|...+.+.+.+.+.+..+.
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 8887 5678889999999999999988989999999886665
No 70
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.21 E-value=1.6e-11 Score=111.75 Aligned_cols=136 Identities=18% Similarity=0.208 Sum_probs=96.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHhC--CCCEEEecCCCCCc-----ccc--ccCCCHHHHhhcCCEEEEecCCChhhhcccC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAF--SCPINYYSRTEKPN-----LKY--KYYPSVVELASNCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~--G~~V~~~~~~~~~~-----~~~--~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~ 214 (313)
-++|||||+|.||+.+|+.|... |++|.+||++++.. .+. ....+++++++++|+|++++|... ...++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHH-
Confidence 36899999999999999999876 67999999976532 122 124567788899999999999443 34454
Q ss_pred HHHHhc-cCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEec---CCCCC---CCCC-CcccCCCceEEccCCCCC
Q 021388 215 REVIDA-LGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLD---VFENE---PHVP-EELFGLENVVLMPHVGSG 283 (313)
Q Consensus 215 ~~~l~~-mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lD---V~~~E---p~~~-~~L~~~pnv~lTPH~a~~ 283 (313)
++..+. ++++.+++|+++......+.+.+.+.+.... .++ ++..| |... .++++-++++++||.++.
T Consensus 84 ~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 84 KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCC
T ss_pred HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCC
Confidence 456677 8999999999988776678888888753333 233 33222 2222 267778889999987654
No 71
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.19 E-value=5.1e-10 Score=105.73 Aligned_cols=207 Identities=9% Similarity=0.080 Sum_probs=125.4
Q ss_pred CChhHHHHHHhcCcEEEeecCCC-----hHHHHHh-------ccCCceEEEEeCCCCCCHHHHhhCC-CccEEEEcCcCC
Q 021388 12 MNTYLEQELERRFNLFKFWTVSD-----KTQFLKA-------QQNNIRAVVGNATAGADAELIDALP-KLEIVSSFSVGL 78 (313)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~-------~~~~~~~i~~~~~~~~~~~~l~~~~-~Lk~i~~~~~G~ 78 (313)
+.|+..+.|.+....+....... ++++..+ ..+ +|+|+. -. ..+.+.++.++ +-.++...-...
T Consensus 40 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~-adiIlk-Vk-~p~~~e~~~l~~g~~l~~~lh~~~ 116 (381)
T 3p2y_A 40 LVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWP-ADVVVK-VN-PPTSDEISQLKPGSVLIGFLAPRT 116 (381)
T ss_dssp SCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTT-SSEEEC-SS-CCCHHHHTTSCTTCEEEECCCTTT
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeec-CCEEEE-eC-CCChhHHhhccCCCEEEEEecccc
Confidence 66888888877643344432221 2233222 122 677765 22 24556677765 444555544444
Q ss_pred CcCChhhhhhcCcEEEc---CCCCC-------hHHHHHHHHHHHH-HHHhchhHHHHHHhcCCCCCCCcccccccCCCEE
Q 021388 79 DKVDMVKCKEKGVRVTN---TPDVL-------TDDVADLAIGLML-AVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTV 147 (313)
Q Consensus 79 d~id~~~~~~~gI~v~n---~~~~~-------~~~vAE~al~~~L-~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~i 147 (313)
|.=-++++.++||.... .|... -.+++|.+=.+.. ..+..+ ++....-..-...+.+++|
T Consensus 117 ~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av~~aa~~l---------~~~~~~l~~~~~~v~~~kV 187 (381)
T 3p2y_A 117 QPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLLGASLS---------TRFVPMLTTAAGTVKPASA 187 (381)
T ss_dssp CHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHHHHHHHHC---------SSCSSCEECSSCEECCCEE
T ss_pred CHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHHHHHHHHh---------hhhhhhhhcccCCcCCCEE
Confidence 43335678889998854 23211 1344444321111 111111 1111000001124789999
Q ss_pred EEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc-------------------------CCCHHHHhhcCC
Q 021388 148 GIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY-------------------------YPSVVELASNCH 197 (313)
Q Consensus 148 giiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~-------------------------~~~l~e~~~~aD 197 (313)
+|||+|.||..+++.++++|++|+++|+++.... +... ..++.+.++++|
T Consensus 188 ~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aD 267 (381)
T 3p2y_A 188 LVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFD 267 (381)
T ss_dssp EEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCS
T ss_pred EEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCC
Confidence 9999999999999999999999999999875311 1111 124678899999
Q ss_pred EEEEec--CCChhhhcccCHHHHhccCCCcEEEEcC
Q 021388 198 ILVVAC--PLTEETRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 198 vV~~~l--p~~~~t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
+|+.++ |.. .+..+++++.++.||+|+++||++
T Consensus 268 IVI~tv~iPg~-~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 268 IVITTALVPGR-PAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp EEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETT
T ss_pred EEEECCCCCCc-ccceeecHHHHhcCCCCcEEEEEe
Confidence 999886 532 356789999999999999999997
No 72
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.19 E-value=1.4e-10 Score=108.84 Aligned_cols=103 Identities=19% Similarity=0.221 Sum_probs=86.4
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhh-cCCEEEEecCCChhhhcccC
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELAS-NCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~-~aDvV~~~lp~~~~t~~li~ 214 (313)
++.||+++|+|+|++|+.+|++++.+|++|+++|+++... .+.. ..+.++++. +||+++.| .+.++|+
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~-~v~~~ell~~~~DIliP~-----A~~~~I~ 245 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT-AVALEDVLSTPCDVFAPC-----AMGGVIT 245 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGGGGCCCSEEEEC-----SCSCCBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCE-EeChHHhhcCccceecHh-----HHHhhcC
Confidence 6899999999999999999999999999999999875421 1222 235678777 89998743 4788999
Q ss_pred HHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 215 REVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 215 ~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+.++.|| ..+++|.+++.++++++ .++|+++++.
T Consensus 246 ~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp HHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred HHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 99999998 78999999999999888 6999999886
No 73
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.18 E-value=1.7e-11 Score=109.45 Aligned_cols=92 Identities=15% Similarity=0.257 Sum_probs=67.4
Q ss_pred cccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCC--------------c------cccccCCCHHHHhhcCC
Q 021388 138 LTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKP--------------N------LKYKYYPSVVELASNCH 197 (313)
Q Consensus 138 ~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~--------------~------~~~~~~~~l~e~~~~aD 197 (313)
...++.+++|||||+|.||..+|+.|...|++|.+|||+++. . .+.....++.+++++||
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD 92 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAE 92 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCS
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCC
Confidence 456799999999999999999999999999999999998764 0 01223457889999999
Q ss_pred EEEEecCCChhhhcccCHHH-HhccCCCcEEEEcCC
Q 021388 198 ILVVACPLTEETRHIINREV-IDALGPKGVLINIGR 232 (313)
Q Consensus 198 vV~~~lp~~~~t~~li~~~~-l~~mk~ga~lIn~~r 232 (313)
+|++++|...... .+ .+. ...+ +|.++||++-
T Consensus 93 vVilavp~~~~~~-~~-~~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 93 LVVNATEGASSIA-AL-TAAGAENL-AGKILVDIAN 125 (245)
T ss_dssp EEEECSCGGGHHH-HH-HHHCHHHH-TTSEEEECCC
T ss_pred EEEEccCcHHHHH-HH-HHhhhhhc-CCCEEEECCC
Confidence 9999999654433 32 233 3445 8999999993
No 74
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.18 E-value=7.6e-11 Score=115.66 Aligned_cols=107 Identities=16% Similarity=0.215 Sum_probs=91.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc----------cccccCCCHHHHhhc---CCEEEEecCCChhhh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN----------LKYKYYPSVVELASN---CHILVVACPLTEETR 210 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~l~e~~~~---aDvV~~~lp~~~~t~ 210 (313)
..+|||||+|.||..+|+.|...|++|.+|||+++.. .+.....+++++++. +|+|++++|....++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 3579999999999999999999999999999987532 233445688898877 999999999877788
Q ss_pred cccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 211 HIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.++ +++.+.+++|.++||++.+...+.+.+.+.+.+..+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 887 6678889999999999999998999999999886655
No 75
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.16 E-value=5e-11 Score=108.79 Aligned_cols=107 Identities=20% Similarity=0.324 Sum_probs=88.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccC--HHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIIN--REV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~--~~~ 217 (313)
++|+|||+|.||..+++.|...|++|.+||++++.. .+.....+++++++++|+|++++|.+.+.+.++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 589999999999999999999999999999986532 1344456888999999999999997766676662 356
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+.+++|.++||++++...+.+.+.+.+.+..+.
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 119 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGVE 119 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6789999999999999888888999999876554
No 76
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.16 E-value=4.2e-11 Score=107.84 Aligned_cols=157 Identities=15% Similarity=0.114 Sum_probs=112.6
Q ss_pred CCCCCHHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCC
Q 021388 54 TAGADAELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK 133 (313)
Q Consensus 54 ~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~ 133 (313)
+.+..+++++.+++++-++....|+|.++. +.|-. .|++... .+++.++.|
T Consensus 60 t~P~k~~i~~~~~~l~~~a~~~gavn~i~~----~~g~~----~g~ntd~-----~g~~~~l~~---------------- 110 (263)
T 2d5c_A 60 TLPLKEAALAHLDWVSPEAQRIGAVNTVLQ----VEGRL----FGFNTDA-----PGFLEALKA---------------- 110 (263)
T ss_dssp CTTCTTGGGGGCSEECHHHHHHTCCCEEEE----ETTEE----EEECCHH-----HHHHHHHHH----------------
T ss_pred cccCHHHHHHHHHHHhHHHHHhCCCCcEEc----cCCeE----EEeCCCH-----HHHHHHHHH----------------
Confidence 346778899999999988888999999875 33422 2344432 244444432
Q ss_pred CCcccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------ccccCCCHHHHhhcCCEEEEecCCCh
Q 021388 134 GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KYKYYPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 134 ~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
.+.++.| +++|||+|.||+.+++.|...|++|.++||+.++.. +.. ..+++++ +++|+|++++|...
T Consensus 111 ----~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~ 183 (263)
T 2d5c_A 111 ----GGIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGL 183 (263)
T ss_dssp ----TTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTT
T ss_pred ----hCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCC
Confidence 1235788 999999999999999999999999999999864321 112 3467788 99999999999763
Q ss_pred --hhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 208 --ETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 208 --~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+...+. .+.+++|.+++|++.+.. +. .+.+++++..+.
T Consensus 184 ~~~~~~~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~~g~~ 224 (263)
T 2d5c_A 184 EDPSASPLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKAKGLK 224 (263)
T ss_dssp TCTTCCSSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHHTTCE
T ss_pred CCCCCCCCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHHCcCE
Confidence 2223443 466899999999998743 44 477777776554
No 77
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.15 E-value=6.3e-11 Score=108.20 Aligned_cols=107 Identities=15% Similarity=0.210 Sum_probs=89.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccC--HHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIIN--REV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~--~~~ 217 (313)
++|||||+|.||+.+++.|...|++|.+||++++.. .+.....+++++++++|+|++++|.+.+++.++. ++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999976532 1334456888999999999999997777777764 356
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+.+++|.++|++++|...+.+.+.+.+.+..+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~ 118 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGID 118 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6789999999999999877888899998875554
No 78
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.15 E-value=7.3e-11 Score=107.39 Aligned_cols=106 Identities=10% Similarity=0.139 Sum_probs=87.2
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCH--HH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINR--EV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~--~~ 217 (313)
++|||||+|.||+.+|+.|...|++|.+|| +++... +.....+++++++++|+|++++|...+++.++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 589999999999999999999999999999 665322 3344568889999999999999977666666532 45
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+.+++|.++|+++++...+.+.+.+.+.+..+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 116 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEMGAD 116 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 6678999999999999888889999999875554
No 79
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.13 E-value=1e-10 Score=106.55 Aligned_cols=104 Identities=17% Similarity=0.239 Sum_probs=84.2
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCH--HH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINR--EV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~--~~ 217 (313)
++|||||+|.||+.+|+.|...|++|.+|||+++.. .+.....+++++++++|+|++++|.+.+++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 369999999999999999999999999999987532 23344568889999999999999977777766532 25
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
++.+++|.++|+++.....+.+.+.+.+.+.
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~ 111 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEKM 111 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999998888877777787777654
No 80
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.12 E-value=8.1e-11 Score=110.13 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=90.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhc----CCEEEEecCCChhhhcccC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASN----CHILVVACPLTEETRHIIN 214 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~----aDvV~~~lp~~~~t~~li~ 214 (313)
-++|||||+|.||.++|+.|+..|++|++||++++.. .+.....++++++++ +|+|++|+|. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 3579999999999999999999999999999987532 233335678877764 7999999994 4556665
Q ss_pred HHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEE-EecCCCCCC-CC---CCcccCCCceEEccCCC
Q 021388 215 REVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGA-GLDVFENEP-HV---PEELFGLENVVLMPHVG 281 (313)
Q Consensus 215 ~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga-~lDV~~~Ep-~~---~~~L~~~pnv~lTPH~a 281 (313)
+++ ..++++++++|++..+....+++.+.+. ..... .--++..|- -+ ...|++-.++++||+-.
T Consensus 86 ~~l-~~~~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~ 154 (341)
T 3ktd_A 86 DAV-HTHAPNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQL 154 (341)
T ss_dssp HHH-HHHCTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGG
T ss_pred HHH-HccCCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCC
Confidence 344 3358999999998776544444444432 12211 123444441 11 13588888899999744
No 81
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.11 E-value=1.5e-10 Score=106.59 Aligned_cols=107 Identities=16% Similarity=0.281 Sum_probs=87.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCH--HH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINR--EV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~--~~ 217 (313)
++|||||+|.||+.+|+.|...|++|.+||++++... +.....+++++++++|+|++++|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999999876432 3334567889899999999999976666666532 24
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
++.++++.++||++++.....+.+.+.+......
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~ 144 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGR 144 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 5778999999999998887888899988765554
No 82
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.10 E-value=1.2e-10 Score=105.54 Aligned_cols=104 Identities=20% Similarity=0.251 Sum_probs=85.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
++|||||+|.||..+|+.|.. |++|.+||++++... +..... ++++++++|+|++++|....+..++ ++..+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~ 78 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA-EALYP 78 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH-HHHTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH-HHHHh
Confidence 479999999999999999999 999999999875321 222233 6778889999999999766666665 56667
Q ss_pred ccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 220 ALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+++|.++|+++.+...+.+.+.+.+.+..+.
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~ 110 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGVT 110 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTEE
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 89999999999999888889999999876544
No 83
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.09 E-value=1.2e-10 Score=113.55 Aligned_cols=106 Identities=16% Similarity=0.277 Sum_probs=89.2
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc---------ccccCCCHHHHhhc---CCEEEEecCCChhhhcc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL---------KYKYYPSVVELASN---CHILVVACPLTEETRHI 212 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~l~e~~~~---aDvV~~~lp~~~~t~~l 212 (313)
++|||||+|.||+.+|+.|...|++|.+|||+++... +.....+++++++. +|+|++++|....++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5799999999999999999999999999999865311 33345688898876 99999999987777777
Q ss_pred cCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 213 INREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 213 i~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+ +++.+.+++|.++|+++.+...+.+.+.+.+.+..+.
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~ 123 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGIN 123 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCe
Confidence 7 5677889999999999999888888899888876655
No 84
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.08 E-value=2.2e-10 Score=112.05 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=88.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc----------cccccCCCHHHHhh---cCCEEEEecCCChhhhc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN----------LKYKYYPSVVELAS---NCHILVVACPLTEETRH 211 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~l~e~~~---~aDvV~~~lp~~~~t~~ 211 (313)
++|||||+|.||+.+|..|...|++|.+|||+++.. .+.....+++++++ ++|+|++++|....++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 479999999999999999999999999999987531 22334568888874 89999999998777777
Q ss_pred ccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 212 IINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 212 li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
++ +++.+.+++|.++|+++.+...+...+.+.+.+..+.
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~ 121 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGIL 121 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 77 5677889999999999999988888888888876555
No 85
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.08 E-value=4.5e-10 Score=104.15 Aligned_cols=139 Identities=14% Similarity=0.105 Sum_probs=94.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----------------c--------------cccCCCHHHHh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----------------K--------------YKYYPSVVELA 193 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~--------------~~~~~~l~e~~ 193 (313)
-++|||||+|.||.++|..+...|++|.+||++++... + .....++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 36899999999999999999999999999999865211 1 12346888999
Q ss_pred hcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCc
Q 021388 194 SNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLEN 273 (313)
Q Consensus 194 ~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pn 273 (313)
++||+|+.++|...+.+..+-+++.+.+++++++++.+.+ +....+.+.+... .+..+..-+. |. ...+-
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~~-~r~ig~Hp~~--P~-----~~~~l 155 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAHV-KQCIVAHPVN--PP-----YYIPL 155 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTTG-GGEEEEEECS--ST-----TTCCE
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCCC-CCeEEeecCC--ch-----hhcce
Confidence 9999999999987766655546778889999999866555 4445666666432 2222333332 22 12344
Q ss_pred eEEccCCCCCcHHHHHHHHH
Q 021388 274 VVLMPHVGSGTVETRKTMAD 293 (313)
Q Consensus 274 v~lTPH~a~~t~~~~~~~~~ 293 (313)
+.++|+-. .+++..+++..
T Consensus 156 veiv~g~~-t~~e~~~~~~~ 174 (319)
T 2dpo_A 156 VELVPHPE-TSPATVDRTHA 174 (319)
T ss_dssp EEEEECTT-CCHHHHHHHHH
T ss_pred EEEeCCCC-CCHHHHHHHHH
Confidence 66777533 33444444433
No 86
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.07 E-value=1.6e-10 Score=112.48 Aligned_cols=130 Identities=10% Similarity=0.123 Sum_probs=95.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhC--CCCEEEecCCCCCcc------------------------ccccCCCHHHHhhcCCE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF--SCPINYYSRTEKPNL------------------------KYKYYPSVVELASNCHI 198 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~--G~~V~~~~~~~~~~~------------------------~~~~~~~l~e~~~~aDv 198 (313)
++|+|||+|.||..+|..|... |++|++||++++... +.....++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999988 899999998764211 12223577888999999
Q ss_pred EEEecCCChhhhccc-------------CHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEec---CCCCCC
Q 021388 199 LVVACPLTEETRHII-------------NREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLD---VFENEP 262 (313)
Q Consensus 199 V~~~lp~~~~t~~li-------------~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lD---V~~~Ep 262 (313)
|++|+|.....+.++ .++..+.+++|+++||.|+..+-..+.+.+.+.+.... .+| ++.+|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeCHHH
Confidence 999998654433211 23466778999999999999988888899999876432 233 356666
Q ss_pred CCCC----cccCCCceEE
Q 021388 263 HVPE----ELFGLENVVL 276 (313)
Q Consensus 263 ~~~~----~L~~~pnv~l 276 (313)
..+. .+...+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 5443 2556677764
No 87
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.06 E-value=7.8e-10 Score=99.89 Aligned_cols=139 Identities=17% Similarity=0.200 Sum_probs=94.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cc--ccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KY--KYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~--~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
++|+|||+|.||+.+++.|...|++|.+||++++... +. ....+++++ +++|+|++++|. ..+..++ ++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH-HHH
Confidence 4799999999999999999999999999999865321 22 124567788 899999999993 3445554 456
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCC---CCCC-CcccCCCceEEccCCCCCcHHHHHH
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENE---PHVP-EELFGLENVVLMPHVGSGTVETRKT 290 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~E---p~~~-~~L~~~pnv~lTPH~a~~t~~~~~~ 290 (313)
...+++++++||++..+....+.+.+.+. ++.+ ..-++..+ |... ..++.-+.++++|+-++ +.+..+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~-~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~-~~~~~~~ 150 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIG-GHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT-DPEQLAC 150 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEE-EEECCCCSCSSGGGCCTTTTTTCEEEEEECTTC-CHHHHHH
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEee-cCcccCCccCCHHHHhHHHhCCCcEEEecCCCC-CHHHHHH
Confidence 67789999999998876666666655543 3322 22333222 2111 14566678899997543 4444443
No 88
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.04 E-value=2.8e-10 Score=111.22 Aligned_cols=106 Identities=17% Similarity=0.270 Sum_probs=88.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------c-------cccCCCHHHHhhc---CCEEEEecCCChh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------K-------YKYYPSVVELASN---CHILVVACPLTEE 208 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~-------~~~~~~l~e~~~~---aDvV~~~lp~~~~ 208 (313)
++|||||+|.||+.+|..|...|++|.+|||+++... + .....+++++++. +|+|++++|....
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 3699999999999999999999999999999764211 2 2345688888774 9999999998777
Q ss_pred hhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 209 TRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 209 t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
++.++ +++.+.+++|.++|+++.|...+.+.+.+.+.+..+.
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~ 123 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLR 123 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCe
Confidence 77777 5677889999999999999888888999999876655
No 89
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.04 E-value=5.4e-10 Score=108.47 Aligned_cols=142 Identities=17% Similarity=0.190 Sum_probs=99.4
Q ss_pred EcCcCCCcCC-hhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEc
Q 021388 73 SFSVGLDKVD-MVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIG 151 (313)
Q Consensus 73 ~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG 151 (313)
-+++|+..+. +.+.....|++.|+.+...++.-+...+.--++...+ .+. .+..+.||+++|+|
T Consensus 208 eTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi------~r~---------tg~~L~GKtVvVtG 272 (488)
T 3ond_A 208 ETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL------MRA---------TDVMIAGKVAVVAG 272 (488)
T ss_dssp CSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH------HHH---------HCCCCTTCEEEEEC
T ss_pred cccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHHHHHHH------HHH---------cCCcccCCEEEEEC
Confidence 3467776652 2233356799999987555542222222111111111 010 23458999999999
Q ss_pred CChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcE
Q 021388 152 LGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGV 226 (313)
Q Consensus 152 ~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~ 226 (313)
+|.||+.+|++|+++|++|+++|+++.... ++ ...++++++..+|+|+.+.. +.++++.+.+..||++++
T Consensus 273 aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~-dv~~lee~~~~aDvVi~atG----~~~vl~~e~l~~mk~gai 347 (488)
T 3ond_A 273 YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGL-QVLTLEDVVSEADIFVTTTG----NKDIIMLDHMKKMKNNAI 347 (488)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-EECCGGGTTTTCSEEEECSS----CSCSBCHHHHTTSCTTEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCC-ccCCHHHHHHhcCEEEeCCC----ChhhhhHHHHHhcCCCeE
Confidence 999999999999999999999998764321 22 24578889999999987643 567888999999999999
Q ss_pred EEEcCCCc
Q 021388 227 LINIGRGP 234 (313)
Q Consensus 227 lIn~~rg~ 234 (313)
++|+|++.
T Consensus 348 VvNaG~~~ 355 (488)
T 3ond_A 348 VCNIGHFD 355 (488)
T ss_dssp EEESSSTT
T ss_pred EEEcCCCC
Confidence 99999983
No 90
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.01 E-value=7.5e-10 Score=101.42 Aligned_cols=137 Identities=17% Similarity=0.149 Sum_probs=91.3
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------------ccccCCCHHHHhhcCCEEEEecCCChhh
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------------KYKYYPSVVELASNCHILVVACPLTEET 209 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------------~~~~~~~l~e~~~~aDvV~~~lp~~~~t 209 (313)
-..|+|||||+|.||..||+.+. .|++|.+||++++... +.....++++ +++||+|+.++|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 56789999999999999999999 9999999999875321 2223456766 88999999999999887
Q ss_pred hcccCHHHHhccCCCcEE-EEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHH
Q 021388 210 RHIINREVIDALGPKGVL-INIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETR 288 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~l-In~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~ 288 (313)
+..+-.+ +..+ +++++ .|+|..++ ..+.+.+. ...+..++--|. |. ...+-+.++|+-. .+++..
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~--Pv-----~~~~lveiv~g~~-t~~~~~ 153 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN--PP-----HVMPLVEIVISRF-TDSKTV 153 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS--ST-----TTCCEEEEEECTT-CCHHHH
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC--cc-----ccCCEEEEECCCC-CCHHHH
Confidence 7666444 5666 99998 48877554 34444342 222233444444 32 2356677777532 344555
Q ss_pred HHHHHH
Q 021388 289 KTMADL 294 (313)
Q Consensus 289 ~~~~~~ 294 (313)
+++...
T Consensus 154 ~~~~~l 159 (293)
T 1zej_A 154 AFVEGF 159 (293)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 91
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.01 E-value=9e-10 Score=105.93 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=84.5
Q ss_pred cccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----------------------ccccCCCHHHHhh
Q 021388 138 LTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----------------------KYKYYPSVVELAS 194 (313)
Q Consensus 138 ~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----------------------~~~~~~~l~e~~~ 194 (313)
++++..-++|+|||+|.||..+|..|.. |++|++||++++... ......++++.++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 4566677899999999999999999988 999999999865211 1223467889999
Q ss_pred cCCEEEEecCCChhh-------hccc--CHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 195 NCHILVVACPLTEET-------RHII--NREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 195 ~aDvV~~~lp~~~~t-------~~li--~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+||+|++++|...+. ..+. -+...+ +++|+++|+.|+..+-..+.+.+.+.+..+.
T Consensus 109 ~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v~ 173 (432)
T 3pid_A 109 NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNVI 173 (432)
T ss_dssp TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccEe
Confidence 999999999965321 1111 245666 9999999999999999999999999876554
No 92
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.00 E-value=1.8e-09 Score=104.50 Aligned_cols=177 Identities=16% Similarity=0.147 Sum_probs=111.8
Q ss_pred CCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC----cccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEE
Q 021388 96 TPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD----YKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPIN 171 (313)
Q Consensus 96 ~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~----~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~ 171 (313)
..|-|-..|.|.+.++++..-|. .++|...+ +.....-.=++|||||+|.||..||..+...|++|.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~---------~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~ 81 (460)
T 3k6j_A 11 STGENLYFQGSEVRSYLMEAHSL---------AGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETF 81 (460)
T ss_dssp TTSGGGGGCBCHHHHHHHHTTCC---------TTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred ccccchhhhhHHHHHHHHhHHHh---------hccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEE
Confidence 34555666677777777773322 34575321 111111233789999999999999999999999999
Q ss_pred EecCCCCCc-------------ccc-------------ccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCc
Q 021388 172 YYSRTEKPN-------------LKY-------------KYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKG 225 (313)
Q Consensus 172 ~~~~~~~~~-------------~~~-------------~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga 225 (313)
+||++++.. .+. ....+++ .+++||+|+.++|...+.+..+-+++.+.+++++
T Consensus 82 l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~a 160 (460)
T 3k6j_A 82 LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTC 160 (460)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTC
T ss_pred EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCC
Confidence 999987511 010 1234564 6889999999999887776655577788899999
Q ss_pred EEE-EcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHH
Q 021388 226 VLI-NIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADL 294 (313)
Q Consensus 226 ~lI-n~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~ 294 (313)
+|+ |+|. +....+.+.+.. .-+..++.-|. |.. ..+-+.++|+-. .+++..+++...
T Consensus 161 IlasnTSs---l~i~~ia~~~~~-p~r~iG~Hffn--Pv~-----~m~LvEIv~g~~-Ts~e~~~~~~~l 218 (460)
T 3k6j_A 161 IFGTNTSS---LDLNEISSVLRD-PSNLVGIHFFN--PAN-----VIRLVEIIYGSH-TSSQAIATAFQA 218 (460)
T ss_dssp EEEECCSS---SCHHHHHTTSSS-GGGEEEEECCS--STT-----TCCEEEEECCSS-CCHHHHHHHHHH
T ss_pred EEEecCCC---hhHHHHHHhccC-CcceEEEEecc--hhh-----hCCEEEEEeCCC-CCHHHHHHHHHH
Confidence 996 5554 334556555543 22345666665 322 234466777532 345555554443
No 93
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.98 E-value=3.5e-10 Score=109.23 Aligned_cols=92 Identities=16% Similarity=0.318 Sum_probs=71.8
Q ss_pred ccccCC-CEEEEEcCChHHHHHHHHHHhC------CCCEEEecCCCCC------cccccc----CCCHHHHhhcCCEEEE
Q 021388 139 TTKFTG-KTVGIIGLGRIGMAVAKRAEAF------SCPINYYSRTEKP------NLKYKY----YPSVVELASNCHILVV 201 (313)
Q Consensus 139 ~~~l~g-~~igiiG~G~iG~~iA~~l~~~------G~~V~~~~~~~~~------~~~~~~----~~~l~e~~~~aDvV~~ 201 (313)
...|.| ++|||||+|+||+++|+.|+.. |++|++.++.... ..++.. ..++.+++++||+|++
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVIL 127 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLL 127 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEE
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEE
Confidence 346999 9999999999999999999988 9998866554322 123332 2578999999999999
Q ss_pred ecCCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 202 ACPLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 202 ~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
++|..... .++. +.++.||+|++ |-.+-|
T Consensus 128 aVP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaG 156 (525)
T 3fr7_A 128 LISDAAQA-DNYE-KIFSHMKPNSI-LGLSHG 156 (525)
T ss_dssp CSCHHHHH-HHHH-HHHHHSCTTCE-EEESSS
T ss_pred CCChHHHH-HHHH-HHHHhcCCCCe-EEEeCC
Confidence 99976554 4664 78999999999 466666
No 94
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.97 E-value=4.6e-10 Score=104.86 Aligned_cols=130 Identities=20% Similarity=0.176 Sum_probs=90.6
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc------cccccCCCHHHHhhcCCEEEEecCCChhhhcccC
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN------LKYKYYPSVVELASNCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~------~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~ 214 (313)
.+.+++|||||+|.||+++|+.|+..|++|.+++++.... .+.... ++++++++||+|++++|... ...++.
T Consensus 13 ~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 5788999999999999999999999999999999986531 133323 78899999999999999543 355554
Q ss_pred HHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCC----cccC---CCceEEccCCC
Q 021388 215 REVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPE----ELFG---LENVVLMPHVG 281 (313)
Q Consensus 215 ~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~----~L~~---~pnv~lTPH~a 281 (313)
++..+.+++|+++++++ | +.. ..+.+. ....+||+...|..+. .+++ -.++++|||..
T Consensus 91 ~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp HHTGGGCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred HHHHhhCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 36677899999999874 2 222 112111 1223455555564332 2444 56788999854
No 95
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.97 E-value=5.8e-10 Score=99.94 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=77.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCC--CCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRT--EKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~--~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
++|||||+|.||..+|+.|...|++|++||+. ++.. .+.. .+++++++++|+|++++|.......+ .+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~ 76 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA--RRA 76 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH--HHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH--HHH
Confidence 47999999999999999999999999999883 2211 1222 56788899999999999976555544 566
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
++.+++ ++||++.+...+.+.+.+.+.+.
T Consensus 77 ~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 77 GRHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp HTTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HHhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 677776 99999988887888888888664
No 96
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.97 E-value=1.2e-09 Score=95.14 Aligned_cols=80 Identities=19% Similarity=0.376 Sum_probs=63.9
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
.++.+++|+|||+|.||..+|+.|...|++|.+|||+++ .++++|+|++++| +..++.++ ++..+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-------------~~~~aD~vi~av~-~~~~~~v~-~~l~~ 79 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-------------ATTLGEIVIMAVP-YPALAALA-KQYAT 79 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-------------CSSCCSEEEECSC-HHHHHHHH-HHTHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-------------HhccCCEEEEcCC-cHHHHHHH-HHHHH
Confidence 358889999999999999999999999999999998764 4578999999999 55666665 34556
Q ss_pred ccCCCcEEEEcCCCcc
Q 021388 220 ALGPKGVLINIGRGPH 235 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~ 235 (313)
.++ ++++|++++|-.
T Consensus 80 ~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 80 QLK-GKIVVDITNPLN 94 (209)
T ss_dssp HHT-TSEEEECCCCBC
T ss_pred hcC-CCEEEEECCCCC
Confidence 677 999999999754
No 97
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.47 E-value=1e-10 Score=101.50 Aligned_cols=90 Identities=18% Similarity=0.204 Sum_probs=71.8
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.+++|||||+|+||+.+|+.|...|++|.+|+|+++.. .+.... ++.++++++|+|++++|.. .+..++ +
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~--~- 91 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA--E- 91 (201)
Confidence 677899999999999999999999999999999876521 112222 6778889999999999964 566665 2
Q ss_pred HhccCCCcEEEEcCCCccc
Q 021388 218 IDALGPKGVLINIGRGPHV 236 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~v 236 (313)
+..+++++++||+++|-..
T Consensus 92 l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 92 LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 4556789999999999754
No 98
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.92 E-value=7.6e-10 Score=99.34 Aligned_cols=98 Identities=13% Similarity=0.274 Sum_probs=75.9
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCC-EEEecCCCCCcc------ccccCCCHHHHhhcCCEEEEecCCChhhhc
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCP-INYYSRTEKPNL------KYKYYPSVVELASNCHILVVACPLTEETRH 211 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~-V~~~~~~~~~~~------~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~ 211 (313)
..++.+++|||||+|.||+.+++.+...|++ |.+||++++... +.....+++++++++|+|++++|.. ....
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~ 83 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAE 83 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHH
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHH
Confidence 3446678999999999999999999999999 899999865321 3334567888889999999999954 3344
Q ss_pred ccCHHHHhccCCCcEEEEcCCCccccH
Q 021388 212 IINREVIDALGPKGVLINIGRGPHVDE 238 (313)
Q Consensus 212 li~~~~l~~mk~ga~lIn~~rg~~vd~ 238 (313)
++ ++..+.+++++++|+++.|...+.
T Consensus 84 v~-~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 84 LL-QGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp HH-HHHHTTCCTTCEEEECCTTSCGGG
T ss_pred HH-HHHHhhcCCCcEEEECCCCCchHH
Confidence 44 456667889999999999876543
No 99
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.89 E-value=8e-09 Score=94.59 Aligned_cols=100 Identities=15% Similarity=0.151 Sum_probs=73.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----------------c------------------cccCCCHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----------------K------------------YKYYPSVV 190 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~------------------~~~~~~l~ 190 (313)
++|+|||+|.||..+|..+...|++|.+||++++... + .....+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999999864211 1 11245777
Q ss_pred HHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHH
Q 021388 191 ELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALV 246 (313)
Q Consensus 191 e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~ 246 (313)
+.+++||+|++++|...+.+..+-+++.+.++++++++..+.+ +....+.+.+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~--i~~~~l~~~~~ 149 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS--LQITSIANATT 149 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS--SCHHHHHTTSS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC--CCHHHHHHhcC
Confidence 7899999999999977655444435566678899998855444 33445555543
No 100
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.89 E-value=2.5e-09 Score=96.97 Aligned_cols=165 Identities=17% Similarity=0.202 Sum_probs=112.0
Q ss_pred CceEEEEeCCCCCCHHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHH
Q 021388 45 NIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDR 124 (313)
Q Consensus 45 ~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~ 124 (313)
+.+++.+. .|..+++++.++.+.-.+....++|.++. +.|-. .|+|.... +++.++.+
T Consensus 65 ~~~G~nvt--iP~k~~i~~~ld~l~~~A~~~gavnti~~----~~g~~----~g~nTd~~-----G~~~~l~~------- 122 (275)
T 2hk9_A 65 KVKGINVT--VPFKEEIIPLLDYVEDTAKEIGAVNTVKF----ENGKA----YGYNTDWI-----GFLKSLKS------- 122 (275)
T ss_dssp TCCEEEEC--TTSTTTTGGGCSEECHHHHHHTCCCEEEE----ETTEE----EEECCHHH-----HHHHHHHH-------
T ss_pred CCCEEEEC--ccCHHHHHHHHHHhhHHHHHhCCcceEEe----eCCEE----EeecCCHH-----HHHHHHHH-------
Confidence 56677663 45667788888888777777788887754 34422 23444322 44444422
Q ss_pred HHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------ccccCCCHHHHhhcCCE
Q 021388 125 YVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KYKYYPSVVELASNCHI 198 (313)
Q Consensus 125 ~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~e~~~~aDv 198 (313)
.+.++.|++++|||.|.||+++++.|...|++|.++||+.++.. +.....++.++++++|+
T Consensus 123 -------------~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDi 189 (275)
T 2hk9_A 123 -------------LIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQV 189 (275)
T ss_dssp -------------HCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSE
T ss_pred -------------hCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCE
Confidence 02247789999999999999999999999999999999864321 22233478888899999
Q ss_pred EEEecCCChh--hhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 199 LVVACPLTEE--TRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 199 V~~~lp~~~~--t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
|++++|.... +...++ ++.+++|.+++|++. .. ..+.+..++..+.
T Consensus 190 Vi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~---~~-t~ll~~a~~~g~~ 237 (275)
T 2hk9_A 190 IVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY---KE-TKLLKKAKEKGAK 237 (275)
T ss_dssp EEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS---SC-CHHHHHHHHTTCE
T ss_pred EEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC---Ch-HHHHHHHHHCcCE
Confidence 9999996642 223343 456899999999998 23 3355555554444
No 101
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.86 E-value=2.5e-08 Score=89.04 Aligned_cols=99 Identities=25% Similarity=0.420 Sum_probs=72.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCC----CCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFS----CPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G----~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
.++|||||+|.||+.+|+.|...| ++|.+|||+++. .+.....+..++++++|+|++++| ......++ .+..+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~-~~l~~ 80 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVL-NNIKP 80 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHH-HHSGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHH-HHHHH
Confidence 458999999999999999999888 689999998765 455556688899999999999999 34455554 34555
Q ss_pred ccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 220 ALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
.++ +..+|....| ++.+.+.+.+..+
T Consensus 81 ~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 81 YLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp GCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred hcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 664 4555544444 3345666666553
No 102
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.86 E-value=7.4e-09 Score=97.53 Aligned_cols=103 Identities=17% Similarity=0.165 Sum_probs=80.9
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------ccccCCCHHHHhh-cCCEEEEecCCChhhhccc
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KYKYYPSVVELAS-NCHILVVACPLTEETRHII 213 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~e~~~-~aDvV~~~lp~~~~t~~li 213 (313)
++.|++|+|+|+|+||+.+|+.|..+|++|+++|++.+... +.. ..+.++++. +||+++.|. +.++|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~-~v~~~~ll~~~~DIvip~a-----~~~~I 243 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD-AVAPNAIYGVTCDIFAPCA-----LGAVL 243 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE-ECCGGGTTTCCCSEEEECS-----CSCCB
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEChHHHhccCCcEeeccc-----hHHHh
Confidence 59999999999999999999999999999999998764321 222 224556655 899998764 56688
Q ss_pred CHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 214 NREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 214 ~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+.+.++.|+ ..++++.+++.+.+++ ..+.|+++++.
T Consensus 244 ~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi~ 279 (364)
T 1leh_A 244 NDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGIV 279 (364)
T ss_dssp STTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTCE
T ss_pred CHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCCE
Confidence 888888884 6789999999988766 55677777764
No 103
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.85 E-value=7.9e-09 Score=84.22 Aligned_cols=103 Identities=17% Similarity=0.233 Sum_probs=82.4
Q ss_pred cCCCEEEEEcC----ChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 142 FTGKTVGIIGL----GRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 142 l~g~~igiiG~----G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.-++|+|||. |.||..+++.|+..|++|+.+++..+...+...+.+++|+....|++++++| .+....++ ++.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~-~~~ 89 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA-KEA 89 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH-HHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH-HHH
Confidence 45678999999 9999999999999999999999887655566677889999999999999999 46666665 334
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+ +..++++++++. ..+++.+++++..+.
T Consensus 90 ~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 90 VE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp HH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred HH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 44 667788888754 268888888888777
No 104
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.84 E-value=4.5e-09 Score=93.51 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=75.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC----CEEEecCCCCCc------cccccCCCHHHHhhcCCEEEEecCCChhhhcccC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC----PINYYSRTEKPN------LKYKYYPSVVELASNCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~----~V~~~~~~~~~~------~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~ 214 (313)
++|||||+|+||+.+++.|...|+ +|.+|||+++.. .+.....+.+++++++|+|++++|. .....++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 589999999999999999999998 999999987532 1344567889999999999999973 3344454
Q ss_pred HHHHhccCCCcEEEEcCCCccccHHHHHHHHHh
Q 021388 215 REVIDALGPKGVLINIGRGPHVDERELVSALVE 247 (313)
Q Consensus 215 ~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~ 247 (313)
++....++++.++|.+..| +..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~g--i~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAG--KSIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCC--SCHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCC--CCHHHHHHHhCC
Confidence 5566778899999976655 345667666654
No 105
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.84 E-value=8.8e-09 Score=99.79 Aligned_cols=102 Identities=12% Similarity=0.185 Sum_probs=80.9
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------------------------c-cccCCCHHHHhhcCCEE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------------------------K-YKYYPSVVELASNCHIL 199 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------------------------~-~~~~~~l~e~~~~aDvV 199 (313)
++|+|||+|.||..+|..|...|++|.+||++++... + .....++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 6899999999999999999999999999999864210 0 12346788889999999
Q ss_pred EEecCCCh---------hhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHh
Q 021388 200 VVACPLTE---------ETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVE 247 (313)
Q Consensus 200 ~~~lp~~~---------~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~ 247 (313)
++|+|... ....++ ++..+.+++|.++|+.+...+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99998653 333333 567778999999999998777777777777765
No 106
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.84 E-value=1.4e-08 Score=97.97 Aligned_cols=102 Identities=10% Similarity=0.070 Sum_probs=79.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc------------------------cc-cccCCCHHHHhhcCCEE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN------------------------LK-YKYYPSVVELASNCHIL 199 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~------------------------~~-~~~~~~l~e~~~~aDvV 199 (313)
++|+|||+|.||..+|..|...|++|.+||++++.. .+ .....++++.+++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 479999999999999999999999999999876421 11 22345778888999999
Q ss_pred EEecCCChh---------hhcccCHHHHhccCC---CcEEEEcCCCcccc-HHHHHHHHHh
Q 021388 200 VVACPLTEE---------TRHIINREVIDALGP---KGVLINIGRGPHVD-ERELVSALVE 247 (313)
Q Consensus 200 ~~~lp~~~~---------t~~li~~~~l~~mk~---ga~lIn~~rg~~vd-~~al~~al~~ 247 (313)
++|+|...+ ....+ ++..+.+++ ++++|+.|+..+-. .+.+.+.+.+
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999996554 33333 556667888 99999999877666 6777777776
No 107
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.84 E-value=9.8e-09 Score=95.06 Aligned_cols=102 Identities=21% Similarity=0.270 Sum_probs=78.0
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCC----CCEEEecCCCC--Cc-----cccccCCCHHHHhhcCCEEEEecCCChhhh
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFS----CPINYYSRTEK--PN-----LKYKYYPSVVELASNCHILVVACPLTEETR 210 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G----~~V~~~~~~~~--~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~ 210 (313)
...++|||||+|.||..+|..|...| ++|.+|+|+++ .. .+.....+..++++++|+|++++| .....
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 44568999999999999999999999 79999999874 21 133444578889999999999999 45555
Q ss_pred cccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHh
Q 021388 211 HIINREVIDALGPKGVLINIGRGPHVDERELVSALVE 247 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~ 247 (313)
.++ .+....+++++++|+++.|- ..+.+.+.+.+
T Consensus 99 ~vl-~~l~~~l~~~~ivvs~s~gi--~~~~l~~~l~~ 132 (322)
T 2izz_A 99 FIL-DEIGADIEDRHIVVSCAAGV--TISSIEKKLSA 132 (322)
T ss_dssp HHH-HHHGGGCCTTCEEEECCTTC--CHHHHHHHHHT
T ss_pred HHH-HHHHhhcCCCCEEEEeCCCC--CHHHHHHHHhh
Confidence 555 45666788999999998764 34567677765
No 108
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.83 E-value=5.8e-08 Score=91.37 Aligned_cols=210 Identities=10% Similarity=0.057 Sum_probs=129.3
Q ss_pred CChhHHHHHHhcCcEEEeecCC------ChHHHH----------HhccCCceEEEEeCCCCCCHHHHhhCCCccEEEEcC
Q 021388 12 MNTYLEQELERRFNLFKFWTVS------DKTQFL----------KAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFS 75 (313)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~------~~~~~~----------~~~~~~~~~i~~~~~~~~~~~~l~~~~~Lk~i~~~~ 75 (313)
++|...+.|.+....+...... ..++.. .+.+ ++|+|+.. ..+...+.....+++.++....
T Consensus 18 ~~P~~v~~l~~~g~~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~-~ad~i~~v-ksP~~~~~~~~~~g~~~~~y~~ 95 (361)
T 1pjc_A 18 LSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAW-SREMVVKV-KEPLPAEYDLMQKDQLLFTYLH 95 (361)
T ss_dssp CCHHHHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHH-TSSEEECS-SCCCGGGGGGCCTTCEEEECCC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHh-cCCeEEEE-CCCCHHHHHhhcCCCEEEEEec
Confidence 6788888887763333332211 112221 1223 68987763 3444444333345666666666
Q ss_pred cCCCcCChhhhhhcCcEEEcC---CCCC-----hHHHHHHHH--HHHHHHHhchhHHHHHHhcC--CCCCCCcccccccC
Q 021388 76 VGLDKVDMVKCKEKGVRVTNT---PDVL-----TDDVADLAI--GLMLAVLRRLCESDRYVRSG--KWKKGDYKLTTKFT 143 (313)
Q Consensus 76 ~G~d~id~~~~~~~gI~v~n~---~~~~-----~~~vAE~al--~~~L~~~r~~~~~~~~~~~~--~w~~~~~~~~~~l~ 143 (313)
..++.-.++++.+.|+...|. |... -.+++|.+- +.++.... +.. ...| .+.. . . ..+.
T Consensus 96 ~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~n-t~~----~~~g~G~~l~-~--l-~~l~ 166 (361)
T 1pjc_A 96 LAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARF-LER----QQGGRGVLLG-G--V-PGVK 166 (361)
T ss_dssp GGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHHH-TSG----GGTSCCCCTT-C--B-TTBC
T ss_pred cccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHHH-Hhh----ccCCCceecc-C--C-CCCC
Confidence 666654466777889888753 4321 245555544 33443322 211 1112 1111 1 1 2477
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc-------CCCHHHHhhcCCEEEEecCCCh-hhh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY-------YPSVVELASNCHILVVACPLTE-ETR 210 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~-------~~~l~e~~~~aDvV~~~lp~~~-~t~ 210 (313)
++++.|+|.|.+|+.+++.++.+|++|+++|+++++.. +... ..++.+.+..+|+|+.+++... .+.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~ 246 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAP 246 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCC
Confidence 89999999999999999999999999999999865321 1111 1245567789999999987533 234
Q ss_pred cccCHHHHhccCCCcEEEEcCC
Q 021388 211 HIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~r 232 (313)
.++.++.++.|++|.+++|++-
T Consensus 247 ~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 247 ILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCBCHHHHTTSCTTCEEEETTC
T ss_pred eecCHHHHhhCCCCCEEEEEec
Confidence 5567888999999999999984
No 109
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.82 E-value=1.9e-08 Score=97.32 Aligned_cols=103 Identities=14% Similarity=0.211 Sum_probs=82.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----c---------------------cccCCCHHHHhhcCCEE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----K---------------------YKYYPSVVELASNCHIL 199 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----~---------------------~~~~~~l~e~~~~aDvV 199 (313)
-+|+|||+|.||..+|..|...|++|++||+++++.. + .....++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 4799999999999999999999999999999876311 1 12346788899999999
Q ss_pred EEecCCChh----------hhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 200 VVACPLTEE----------TRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 200 ~~~lp~~~~----------t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
++|+|...+ .+..+ ++..+.+++|.++|+.|+..+-..+.+.+.+.+.
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 999985532 33333 5677889999999999988887888888888764
No 110
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.81 E-value=1.9e-08 Score=91.42 Aligned_cols=100 Identities=16% Similarity=0.107 Sum_probs=77.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC---CEEEecCCCCCc------cccccCCCHHHHhhcCCEEEEecCCChhhhcccC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC---PINYYSRTEKPN------LKYKYYPSVVELASNCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~---~V~~~~~~~~~~------~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~ 214 (313)
.++|||||+|+||..+++.+...|+ +|.+|||+++.. .+.....+..++++++|+|++++|. .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4689999999999999999999998 899999987632 1344456888999999999999973 3344444
Q ss_pred HHHHhc-cCCCcEEEEcCCCccccHHHHHHHHHh
Q 021388 215 REVIDA-LGPKGVLINIGRGPHVDERELVSALVE 247 (313)
Q Consensus 215 ~~~l~~-mk~ga~lIn~~rg~~vd~~al~~al~~ 247 (313)
+++... +++++++|++.-|- ..+.+.+.+..
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~ 112 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGV--TTPLIEKWLGK 112 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTC
T ss_pred HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCC
Confidence 455555 78888999887663 45778788765
No 111
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.77 E-value=5.7e-09 Score=85.08 Aligned_cols=85 Identities=18% Similarity=0.299 Sum_probs=68.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------cc--ccCCCHHHHhhcCCEEEEecCCChhhhcccCH
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KY--KYYPSVVELASNCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~--~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~ 215 (313)
+++++|||.|.||+.+++.|+..|++|.+++|+++... +. ....+++++++++|+|+.++|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 88999999999999999999999999999999875321 11 23567889999999999999865 234443
Q ss_pred HHHhccCCCcEEEEcCCCc
Q 021388 216 EVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~rg~ 234 (313)
..+++|.+++|++...
T Consensus 98 ---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp ---GGCCTTCEEEECCSSC
T ss_pred ---HHcCCCCEEEEccCCc
Confidence 4578899999998754
No 112
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.76 E-value=9.6e-09 Score=89.66 Aligned_cols=90 Identities=18% Similarity=0.185 Sum_probs=68.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
.+++|+|||+|.||+.+++.|...|++|.+++|+++... +.... +++++++++|+|++++|. .....++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~~--- 101 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLCS--- 101 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGGG---
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHHH---
Confidence 457899999999999999999999999999999765321 22222 688889999999999994 34455552
Q ss_pred HhccCCCcEEEEcCCCcccc
Q 021388 218 IDALGPKGVLINIGRGPHVD 237 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd 237 (313)
+..+.+++++|++++|...+
T Consensus 102 l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 102 LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp GHHHHTTCEEEECCCCCHHH
T ss_pred HHHhcCCCEEEEeCCCcccc
Confidence 33333899999999997544
No 113
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.75 E-value=2.6e-08 Score=88.93 Aligned_cols=96 Identities=17% Similarity=0.248 Sum_probs=74.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KYKYYPSVVELASNCHILVVACPLTEETRHIINREVI 218 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l 218 (313)
++|||||+|.||+.+++.|...|.+|.+||++++... +.....+++++++++|+|++++| +... .+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHH
Confidence 5899999999999999999999999999999865321 34445688899999999999999 3333 3445
Q ss_pred hccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 219 DALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 219 ~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
..+++|.++|+...|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 55778999999976643 45566666544
No 114
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.75 E-value=7.7e-09 Score=95.48 Aligned_cols=105 Identities=18% Similarity=0.241 Sum_probs=77.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHh-CCC-CEEEecCCCCCcc------c--cccCCCHHHHhhcCCEEEEecCCChhhhcc
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEA-FSC-PINYYSRTEKPNL------K--YKYYPSVVELASNCHILVVACPLTEETRHI 212 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~-~G~-~V~~~~~~~~~~~------~--~~~~~~l~e~~~~aDvV~~~lp~~~~t~~l 212 (313)
.+++|||||+|.||+.+++.+.. +|+ +|.+|||+++... + .....+++++++++|+|++++|. ...+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcc
Confidence 45799999999999999999875 487 7999999875321 2 33457899999999999999984 3455
Q ss_pred cCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEec
Q 021388 213 INREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLD 256 (313)
Q Consensus 213 i~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lD 256 (313)
+.. +.+++|.++++++....-. ..+.+.+.+... ..+|
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~--~~vD 248 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRPDW-RELDDELMKEAV--LYVD 248 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSE--EEES
T ss_pred cCH---HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCE--EEEC
Confidence 654 5789999999998776533 444444444333 3677
No 115
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.74 E-value=1.9e-08 Score=98.30 Aligned_cols=138 Identities=16% Similarity=0.242 Sum_probs=91.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----------------cc-------------ccCCCHHHHhh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----------------KY-------------KYYPSVVELAS 194 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~~-------------~~~~~l~e~~~ 194 (313)
-++|||||+|.||..||..+...|++|.+||++++... +. ....+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 35899999999999999999999999999999875311 10 1134554 588
Q ss_pred cCCEEEEecCCChhhhcccCHHHHhccCCCcEE-EEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCc
Q 021388 195 NCHILVVACPLTEETRHIINREVIDALGPKGVL-INIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLEN 273 (313)
Q Consensus 195 ~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~l-In~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pn 273 (313)
+||+|+.++|...+.+..+-+++.+.+++++++ .|+|.-++ ..+.+.+.. .-...++..|.+-|. .+-
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~~~~~-p~~~ig~hf~~Pa~v-------~~L 152 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAAEIKN-PERVAGLHFFNPAPV-------MKL 152 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTTTSSS-GGGEEEEEECSSTTT-------CCE
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHHHccC-ccceEEeeecChhhh-------CCe
Confidence 999999999987766554546677889999999 57776543 455555532 223346666654443 244
Q ss_pred eEEccCCCCCcHHHHHHHHHH
Q 021388 274 VVLMPHVGSGTVETRKTMADL 294 (313)
Q Consensus 274 v~lTPH~a~~t~~~~~~~~~~ 294 (313)
+.+.|+-. .+.+..+.+...
T Consensus 153 vevv~g~~-Ts~e~~~~~~~l 172 (483)
T 3mog_A 153 VEVVSGLA-TAAEVVEQLCEL 172 (483)
T ss_dssp EEEEECSS-CCHHHHHHHHHH
T ss_pred EEEecCCC-CCHHHHHHHHHH
Confidence 56666432 344444444433
No 116
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.72 E-value=9.6e-09 Score=93.27 Aligned_cols=87 Identities=13% Similarity=0.280 Sum_probs=69.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHH
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACPLTEETRHIINREVI 218 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l 218 (313)
++|||||+ |.||+.+|+.|...|++|.+|||+++.. .+.. ..+..++++++|+|++++|... +..++ ++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-LTDGDGWIDEADVVVLALPDNI-IEKVA-EDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-CCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-cCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHH
Confidence 58999999 9999999999999999999999986532 1222 2366788899999999999543 45555 5566
Q ss_pred hccCCCcEEEEcCCCc
Q 021388 219 DALGPKGVLINIGRGP 234 (313)
Q Consensus 219 ~~mk~ga~lIn~~rg~ 234 (313)
+.+++++++|+++.|.
T Consensus 89 ~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 89 PRVRPGTIVLILDAAA 104 (286)
T ss_dssp GGSCTTCEEEESCSHH
T ss_pred HhCCCCCEEEECCCCc
Confidence 7789999999998886
No 117
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.72 E-value=4e-08 Score=95.92 Aligned_cols=130 Identities=10% Similarity=0.140 Sum_probs=88.9
Q ss_pred CEEEEEcCChHHHHHHHHHHhC--CCCEEEecCCCCCcc------------c------------cccCCCHHHHhhcCCE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF--SCPINYYSRTEKPNL------------K------------YKYYPSVVELASNCHI 198 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~--G~~V~~~~~~~~~~~------------~------------~~~~~~l~e~~~~aDv 198 (313)
++|+|||+|.||..+|..|... |++|++||++++... + .....++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999877 789999998754210 0 1223466788899999
Q ss_pred EEEecCCChh--------------hhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHh-CCeeEEEec---CCCC
Q 021388 199 LVVACPLTEE--------------TRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVE-GRLGGAGLD---VFEN 260 (313)
Q Consensus 199 V~~~lp~~~~--------------t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~-~~l~ga~lD---V~~~ 260 (313)
|++|+|.... ....+ ++..+.+++|+++|+.|...+-..+.+.+.+.+ .++. ...| ++.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~-~~~d~~v~~~P 167 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNN-ENLKFQVLSNP 167 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC-----CCEEEEECC
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcC-cCCceEEEeCc
Confidence 9999986432 22222 456778999999999998777777888888887 4422 1222 2344
Q ss_pred CCCCCC----cccCCCceEE
Q 021388 261 EPHVPE----ELFGLENVVL 276 (313)
Q Consensus 261 Ep~~~~----~L~~~pnv~l 276 (313)
|...+. .+...+++++
T Consensus 168 e~~~~G~a~~~~~~~~~ivi 187 (481)
T 2o3j_A 168 EFLAEGTAMKDLANPDRVLI 187 (481)
T ss_dssp CCCCTTCHHHHHHSCSCEEE
T ss_pred ccccccchhhcccCCCEEEE
Confidence 443322 2445567665
No 118
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.72 E-value=1.8e-08 Score=82.74 Aligned_cols=101 Identities=18% Similarity=0.219 Sum_probs=81.1
Q ss_pred CCEEEEEcC----ChHHHHHHHHHHhCCCCEEEecCCC--CCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 144 GKTVGIIGL----GRIGMAVAKRAEAFSCPINYYSRTE--KPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 144 g~~igiiG~----G~iG~~iA~~l~~~G~~V~~~~~~~--~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
-++|+|||+ |.+|..+++.|+..|++|+.+|+.. +...+...+.+++++....|++++++| .+....++ ++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~-~~~ 90 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVA-QEA 90 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC-STHHHHHH-HHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHH-HHH
Confidence 568999999 8999999999999999999999876 555566667788898889999999999 46666666 334
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+ ...++++++.+.- ++++.+++++..++
T Consensus 91 ~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~ 119 (145)
T 2duw_A 91 IA-IGAKTLWLQLGVI----NEQAAVLAREAGLS 119 (145)
T ss_dssp HH-HTCCEEECCTTCC----CHHHHHHHHTTTCE
T ss_pred HH-cCCCEEEEcCChH----HHHHHHHHHHcCCE
Confidence 44 5677888886432 78889999988887
No 119
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.69 E-value=5.4e-08 Score=94.77 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=76.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CC-CEEEecCCCC----Ccc--------------------------c-cccCCCHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SC-PINYYSRTEK----PNL--------------------------K-YKYYPSVVE 191 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~-~V~~~~~~~~----~~~--------------------------~-~~~~~~l~e 191 (313)
++|+|||+|.||..+|..|... |+ +|++||++++ ... + ....++ .+
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~e 97 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-FS 97 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-GG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-HH
Confidence 6899999999999999999999 99 9999999877 210 0 011233 56
Q ss_pred HhhcCCEEEEecCCCh--------hhhccc--CHHHHhccCCCcEEEEcCCCccccHHHHHHH
Q 021388 192 LASNCHILVVACPLTE--------ETRHII--NREVIDALGPKGVLINIGRGPHVDERELVSA 244 (313)
Q Consensus 192 ~~~~aDvV~~~lp~~~--------~t~~li--~~~~l~~mk~ga~lIn~~rg~~vd~~al~~a 244 (313)
.+++||+|++|+|... +...+. .+...+.+++|.++|+.|+..+-..+.+.+.
T Consensus 98 a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 98 RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 7889999999999653 222222 2567788999999999999888888888764
No 120
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.69 E-value=3.3e-08 Score=94.35 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=78.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cc------------------ccCCCHHHHhhcCCEEEE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KY------------------KYYPSVVELASNCHILVV 201 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~------------------~~~~~l~e~~~~aDvV~~ 201 (313)
++|+|||+|.||..+|..|.. |++|++||++++... +. ....++.+.++++|+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 479999999999999999999 999999999764211 11 223467788899999999
Q ss_pred ecCCCh----------hhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCe
Q 021388 202 ACPLTE----------ETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRL 250 (313)
Q Consensus 202 ~lp~~~----------~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l 250 (313)
++|... ....++ ++..+ +++++++|+.+.-.+-..+.+.+.+.+..+
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v 136 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDRI 136 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSCE
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCeE
Confidence 999663 234343 45666 899999999888887778888887765533
No 121
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.64 E-value=8.1e-08 Score=93.71 Aligned_cols=103 Identities=11% Similarity=0.137 Sum_probs=77.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc------------cc-------------cccCCCHHHHhhcCCE
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN------------LK-------------YKYYPSVVELASNCHI 198 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~------------~~-------------~~~~~~l~e~~~~aDv 198 (313)
.++|+|||+|.||..+|..|...|++|++||++++.. .+ .....++++.+++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 4699999999999999999999999999999875421 01 1223567788899999
Q ss_pred EEEecCCC---------hhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHh
Q 021388 199 LVVACPLT---------EETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVE 247 (313)
Q Consensus 199 V~~~lp~~---------~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~ 247 (313)
|++|+|.. ...+.++ ++..+.+++++++|+.+...+-..+.+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999863 3333333 556778999999999986555555666666554
No 122
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.62 E-value=1.4e-08 Score=90.66 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=69.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhCC-CCEEEecCCCCCcc------ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFS-CPINYYSRTEKPNL------KYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G-~~V~~~~~~~~~~~------~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
++|||||+|.||+.+|+.|...| ++|.+|||+++... +.....+.++++ ++|+|++++| ......++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---- 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---- 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH----
Confidence 47999999999999999999889 99999999865321 333345666777 9999999999 44544443
Q ss_pred HhccC-CCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 218 IDALG-PKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 218 l~~mk-~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
..++ +++++|+++.|-- .+.+.+.+..+
T Consensus 75 -~~l~~~~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 75 -KNIRTNGALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp -TTCCCTTCEEEECCTTCC--HHHHHHHTTSC
T ss_pred -HHhccCCCEEEEecCCCC--HHHHHHHcCCC
Confidence 2332 2899999865533 36777777653
No 123
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.61 E-value=9.6e-08 Score=92.83 Aligned_cols=111 Identities=16% Similarity=0.161 Sum_probs=76.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----------------c-----------cccCCCHHHHhhcC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----------------K-----------YKYYPSVVELASNC 196 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~-----------~~~~~~l~e~~~~a 196 (313)
-++|||||+|.||..+|..+...|++|.+||++++... + .....++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 46899999999999999999999999999998764211 0 0112455 567899
Q ss_pred CEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCC
Q 021388 197 HILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVF 258 (313)
Q Consensus 197 DvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~ 258 (313)
|+|+.++|...+.+..+-+++.+.+++++++++. ..++ ....+.+.+... -..++...|
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~sn-Ts~~-~~~~la~~~~~~-~~~ig~hf~ 174 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTN-TSAL-NVDDIASSTDRP-QLVIGTHFF 174 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC-CSSS-CHHHHHTTSSCG-GGEEEEEEC
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeC-CCCc-CHHHHHHHhcCC-cceEEeecC
Confidence 9999999976554444445667778999999873 3333 334666655422 222355555
No 124
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.61 E-value=4.5e-08 Score=84.54 Aligned_cols=112 Identities=18% Similarity=0.205 Sum_probs=80.3
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcc------c-----c-ccCCCHHHHhhcCCEEEEecCCChhhhc
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNL------K-----Y-KYYPSVVELASNCHILVVACPLTEETRH 211 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~-----~-~~~~~l~e~~~~aDvV~~~lp~~~~t~~ 211 (313)
++|+|+| .|.||+.+++.|...|++|.+++|+++... + . ....+++++++++|+|++++|. ...+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~-~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPW-EHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCH-HHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCCh-hhHHH
Confidence 4799999 999999999999999999999998764311 1 0 1134677888999999999983 33444
Q ss_pred ccCHHHHhccCCCcEEEEcCCCcccc------------HHHHHHHHHhCCeeEEEecCCCCCCC
Q 021388 212 IINREVIDALGPKGVLINIGRGPHVD------------ERELVSALVEGRLGGAGLDVFENEPH 263 (313)
Q Consensus 212 li~~~~l~~mk~ga~lIn~~rg~~vd------------~~al~~al~~~~l~ga~lDV~~~Ep~ 263 (313)
++ ++..+.++ +.++|+++.|--.+ .+.+.+.+.. . ..++++.+.|.
T Consensus 80 ~~-~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~--~--~~v~~~~~~~~ 137 (212)
T 1jay_A 80 TA-RDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES--E--KVVSALHTIPA 137 (212)
T ss_dssp HH-HHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC--S--CEEECCTTCCH
T ss_pred HH-HHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC--C--eEEEEccchHH
Confidence 44 33444564 99999999875432 5777777753 2 26677766653
No 125
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.61 E-value=9.6e-08 Score=84.34 Aligned_cols=99 Identities=19% Similarity=0.165 Sum_probs=76.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCE-EEecCCCCCccccccCCCHHHHh-hcCCEEEEecCCChhhhcccCHHHHhccC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPI-NYYSRTEKPNLKYKYYPSVVELA-SNCHILVVACPLTEETRHIINREVIDALG 222 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V-~~~~~~~~~~~~~~~~~~l~e~~-~~aDvV~~~lp~~~~t~~li~~~~l~~mk 222 (313)
++|||||+|.||+.+++.+...|+++ .+||++.+.. . .+.++++++ .++|+|++++|..... +.....++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~~-~--~~~~~~~l~~~~~DvVv~~~~~~~~~-----~~~~~~l~ 72 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEHE-K--MVRGIDEFLQREMDVAVEAASQQAVK-----DYAEKILK 72 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCCT-T--EESSHHHHTTSCCSEEEECSCHHHHH-----HHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcchh-h--hcCCHHHHhcCCCCEEEECCCHHHHH-----HHHHHHHH
Confidence 37999999999999999998889997 6899875321 1 466899998 6999999999843222 22345678
Q ss_pred CCcEEEEcCCCccccH---HHHHHHHHhCCee
Q 021388 223 PKGVLINIGRGPHVDE---RELVSALVEGRLG 251 (313)
Q Consensus 223 ~ga~lIn~~rg~~vd~---~al~~al~~~~l~ 251 (313)
.|..+|+.+.+..-+. +.|.++.++.+..
T Consensus 73 ~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 73 AGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp TTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 8999999998887666 6788877765543
No 126
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.61 E-value=9e-08 Score=97.76 Aligned_cols=137 Identities=17% Similarity=0.133 Sum_probs=88.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----------------c-------------cccCCCHHHHhhc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----------------K-------------YKYYPSVVELASN 195 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~-------------~~~~~~l~e~~~~ 195 (313)
++|||||+|.||..||..+...|++|++||++++... + .....++ +.+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 393 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGN 393 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGG
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCC
Confidence 5799999999999999999999999999999865211 1 0112345 56889
Q ss_pred CCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceE
Q 021388 196 CHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVV 275 (313)
Q Consensus 196 aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~ 275 (313)
||+|+.++|...+.+..+-+++.+.+++++++++.+.+ +....+.+.+... -...+...|. |. ...+.+.
T Consensus 394 aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~~-~~~ig~hf~~--P~-----~~~~lve 463 (715)
T 1wdk_A 394 VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALKRP-ENFVGMHFFN--PV-----HMMPLVE 463 (715)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCSCG-GGEEEEECCS--ST-----TTCCEEE
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhcCc-cceEEEEccC--Cc-----ccCceEE
Confidence 99999999988776655546677789999999744333 2334555555321 1224555554 32 1244555
Q ss_pred EccCCCCCcHHHHHHHHH
Q 021388 276 LMPHVGSGTVETRKTMAD 293 (313)
Q Consensus 276 lTPH~a~~t~~~~~~~~~ 293 (313)
+.|+-. .+++..+.+..
T Consensus 464 vv~g~~-t~~e~~~~~~~ 480 (715)
T 1wdk_A 464 VIRGEK-SSDLAVATTVA 480 (715)
T ss_dssp EEECSS-CCHHHHHHHHH
T ss_pred EEECCC-CCHHHHHHHHH
Confidence 655422 24455544443
No 127
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.57 E-value=1.4e-07 Score=90.65 Aligned_cols=106 Identities=14% Similarity=0.227 Sum_probs=77.4
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc----c--ccCCCHHHH---------------hhcCCEEE
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK----Y--KYYPSVVEL---------------ASNCHILV 200 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~----~--~~~~~l~e~---------------~~~aDvV~ 200 (313)
-.|.++.|||+|.||..+|..|...|++|++||+++++... . .....++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 56889999999999999999999999999999998763211 0 011223332 35799999
Q ss_pred EecCCChhhh--------ccc--CHHHHhccCCCcEEEEcCCCccccHHHHHHHHHh
Q 021388 201 VACPLTEETR--------HII--NREVIDALGPKGVLINIGRGPHVDERELVSALVE 247 (313)
Q Consensus 201 ~~lp~~~~t~--------~li--~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~ 247 (313)
+|+|...... .+. .+...+.|++|+++|+.|+..+-..+.+.+.+.+
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e 145 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIE 145 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHH
Confidence 9999654321 222 2567788999999999999998888888776543
No 128
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.56 E-value=1.4e-07 Score=87.80 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=75.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------cc--------------ccCCCHHHHhhcCCEEEEecC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KY--------------KYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~--------------~~~~~l~e~~~~aDvV~~~lp 204 (313)
++|+|||+|.||..+|..|...|++|.+++|+++... +. ....+++++++.+|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999999999999754211 10 134578888899999999999
Q ss_pred CChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 205 LTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
.... ..++ ++..+.+++++++|+. .|.......+.+.+.+.
T Consensus 85 ~~~~-~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~~ 125 (359)
T 1bg6_A 85 AIHH-ASIA-ANIASYISEGQLIILN-PGATGGALEFRKILREN 125 (359)
T ss_dssp GGGH-HHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHHT
T ss_pred chHH-HHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHhc
Confidence 6543 4444 5667779999999998 44223444566666553
No 129
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.56 E-value=1.1e-07 Score=85.56 Aligned_cols=87 Identities=11% Similarity=0.187 Sum_probs=66.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcccc-------c-----cCCCHHHHhhcCCEEEEecCCChhhhcc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKY-------K-----YYPSVVELASNCHILVVACPLTEETRHI 212 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~-------~-----~~~~l~e~~~~aDvV~~~lp~~~~t~~l 212 (313)
++|+|||+|.||..+|..|...|++|.+|+|+++..... . ...+..+.++.+|+|++++|.. .+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 479999999999999999999999999999987532110 0 0112246778999999999965 34545
Q ss_pred cCHHHHhccCCCcEEEEcCCC
Q 021388 213 INREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 213 i~~~~l~~mk~ga~lIn~~rg 233 (313)
+ ++..+.+++++++|++..|
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSS
T ss_pred H-HHHHhhCCCCCEEEEecCC
Confidence 4 5566778899999998765
No 130
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.56 E-value=9e-08 Score=89.21 Aligned_cols=90 Identities=23% Similarity=0.284 Sum_probs=69.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCC-------CCEEEecCCCC-----Ccc-------------------ccccCCCHHHH
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFS-------CPINYYSRTEK-----PNL-------------------KYKYYPSVVEL 192 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G-------~~V~~~~~~~~-----~~~-------------------~~~~~~~l~e~ 192 (313)
.++|+|||+|.||..+|..|...| ++|.+|+|+++ ... +.....+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 358999999999999999999888 89999999875 210 01123567888
Q ss_pred hhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcc
Q 021388 193 ASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPH 235 (313)
Q Consensus 193 ~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~ 235 (313)
++++|+|++++|. .....++ ++..+.+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 8999999999994 3444444 456667889999999988754
No 131
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.56 E-value=5.8e-08 Score=91.57 Aligned_cols=88 Identities=13% Similarity=0.230 Sum_probs=67.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhCC-------CCEEEecCCCC-----Ccc-------------------ccccCCCHHHHh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFS-------CPINYYSRTEK-----PNL-------------------KYKYYPSVVELA 193 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G-------~~V~~~~~~~~-----~~~-------------------~~~~~~~l~e~~ 193 (313)
++|+|||.|.||..+|..|...| ++|.+|+|+++ ... +.....++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998888 99999998765 211 112235677888
Q ss_pred hcCCEEEEecCCChhhhcccCHHHHh----ccCCCcEEEEcCCCc
Q 021388 194 SNCHILVVACPLTEETRHIINREVID----ALGPKGVLINIGRGP 234 (313)
Q Consensus 194 ~~aDvV~~~lp~~~~t~~li~~~~l~----~mk~ga~lIn~~rg~ 234 (313)
+++|+|++++|. .....++ ++... .+++++++|+++.|-
T Consensus 102 ~~aDvVilav~~-~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred cCCCEEEEcCCH-HHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 999999999993 4455454 34555 688899999998773
No 132
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.55 E-value=6.3e-08 Score=90.99 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=72.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-------------c------cccCCCHHHHhhcCCEEEEecC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-------------K------YKYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-------------~------~~~~~~l~e~~~~aDvV~~~lp 204 (313)
.++|+|||.|.||..+|..|...|++|.+|+|+++... + .....++++.++.+|+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 46899999999999999999999999999999754210 0 1223578889999999999999
Q ss_pred CChhhhcccCHHHHhccCCCcEEEEcCCCcccc
Q 021388 205 LTEETRHIINREVIDALGPKGVLINIGRGPHVD 237 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd 237 (313)
.. ..+.++ ++....+++++++|+++.|-..+
T Consensus 109 ~~-~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 109 SF-AFHEVI-TRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp HH-HHHHHH-HHHGGGCCTTCEEEECCCSCBTT
T ss_pred HH-HHHHHH-HHHHHhcCCCCEEEEEeCCCCcC
Confidence 42 444444 56677889999999998876554
No 133
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.52 E-value=1.1e-07 Score=87.79 Aligned_cols=100 Identities=9% Similarity=0.102 Sum_probs=72.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecC--CCCCc-----ccc-----------ccCC--CHHHHhhcCCEEEEecC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSR--TEKPN-----LKY-----------KYYP--SVVELASNCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~--~~~~~-----~~~-----------~~~~--~l~e~~~~aDvV~~~lp 204 (313)
++|+|||+|.||..+|..|...|++|.+|+| +++.. .+. .... ++.+.++++|+|++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 4799999999999999999999999999999 65321 111 1223 67788899999999999
Q ss_pred CChhhhcccCHHHHhccCCCcEEEEcCCCc---c-ccHHHHHHHHHh
Q 021388 205 LTEETRHIINREVIDALGPKGVLINIGRGP---H-VDERELVSALVE 247 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga~lIn~~rg~---~-vd~~al~~al~~ 247 (313)
.. ....++ ++..+ +++++++|+++.|- - -..+.+.+.+.+
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 54 444444 45566 88999999998774 1 123445566654
No 134
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.52 E-value=2.2e-07 Score=94.99 Aligned_cols=136 Identities=16% Similarity=0.130 Sum_probs=87.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----------------c-------------cccCCCHHHHhhc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----------------K-------------YKYYPSVVELASN 195 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~-------------~~~~~~l~e~~~~ 195 (313)
++|||||+|.||..+|..+...|++|++||++++... + .....++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 5799999999999999999999999999999764211 1 0112345 56889
Q ss_pred CCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHh-CCeeEEEecCCCCCCCCCCcccCCCce
Q 021388 196 CHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVE-GRLGGAGLDVFENEPHVPEELFGLENV 274 (313)
Q Consensus 196 aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~-~~l~ga~lDV~~~Ep~~~~~L~~~pnv 274 (313)
||+|+.++|...+.+..+-+++.+.+++++++++.+.+ +....+.+.+.. .++ .+...|. |. ...|.+
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~p~~~--iG~hf~~--P~-----~~~~lv 460 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKSQDRI--VGAHFFS--PA-----HIMPLL 460 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSCTTTE--EEEEECS--ST-----TTCCEE
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcCCCCE--EEecCCC--Cc-----ccCceE
Confidence 99999999988766555546677789999998543333 233445554432 133 3555554 22 124456
Q ss_pred EEccCCCCCcHHHHHHHHH
Q 021388 275 VLMPHVGSGTVETRKTMAD 293 (313)
Q Consensus 275 ~lTPH~a~~t~~~~~~~~~ 293 (313)
.+.|+-. .+++..+.+..
T Consensus 461 evv~g~~-t~~e~~~~~~~ 478 (725)
T 2wtb_A 461 EIVRTNH-TSAQVIVDLLD 478 (725)
T ss_dssp EEEECSS-CCHHHHHHHHH
T ss_pred EEEECCC-CCHHHHHHHHH
Confidence 6665422 34454444443
No 135
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.51 E-value=3.5e-07 Score=82.83 Aligned_cols=81 Identities=12% Similarity=0.245 Sum_probs=68.6
Q ss_pred ccccCCCEEEEEcCCh-HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 139 TTKFTGKTVGIIGLGR-IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~-iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.++.|+++.|||.|. +|+.+|..|...|++|++.+++. .++++.+++||+|+.+++. .+++..+.
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 221 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT---------KDLSLYTRQADLIIVAAGC----VNLLRSDM 221 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------SCHHHHHTTCSEEEECSSC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhhcCCEEEECCCC----CCcCCHHH
Confidence 3469999999999998 69999999999999999988642 3688999999999999983 34576654
Q ss_pred HhccCCCcEEEEcCCCcc
Q 021388 218 IDALGPKGVLINIGRGPH 235 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~ 235 (313)
+|+|+++||++.-.+
T Consensus 222 ---vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 222 ---VKEGVIVVDVGINRL 236 (285)
T ss_dssp ---SCTTEEEEECCCEEC
T ss_pred ---cCCCeEEEEeccCcc
Confidence 599999999997664
No 136
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.51 E-value=2.6e-07 Score=83.71 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=90.2
Q ss_pred ccccCCCEEEEEcCCh-HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 139 TTKFTGKTVGIIGLGR-IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~-iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.++.|+++.|||.|. +|+.+|+.|...|++|++++++. .++.+.+++||+|+.+++.. +++..+.
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------~~L~~~~~~ADIVI~Avg~p----~lI~~~~ 220 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT---------KNLRHHVENADLLIVAVGKP----GFIPGDW 220 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC---------SCHHHHHHHCSEEEECSCCT----TCBCTTT
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHhccCCEEEECCCCc----CcCCHHH
Confidence 3469999999999997 59999999999999999987543 47899999999999999832 3676665
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHHH
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVLG 297 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~~ 297 (313)
+|+|+++||+|.-.+-| |++ .=||-..+ ..+. --.+||--||.-.-+..-+.+..++
T Consensus 221 ---vk~GavVIDVgi~r~~~----------g~l---~GDVdf~~------v~~~-a~~iTPVPGGVGpmT~a~Ll~Ntv~ 277 (288)
T 1b0a_A 221 ---IKEGAIVIDVGINRLEN----------GKV---VGDVVFED------AAKR-ASYITPVPGGVGPMTVATLIENTLQ 277 (288)
T ss_dssp ---SCTTCEEEECCCEECTT----------SCE---ECSBCHHH------HHHH-CSEECCSSSSSHHHHHHHHHHHHHH
T ss_pred ---cCCCcEEEEccCCccCC----------CCc---cCCcCHHH------Hhhh-ccEecCCCCCccHHHHHHHHHHHHH
Confidence 48999999999866432 443 44663111 1111 1268997777765544444444444
Q ss_pred HHHHHH
Q 021388 298 NLEAHF 303 (313)
Q Consensus 298 nl~~~~ 303 (313)
..++++
T Consensus 278 aa~~~~ 283 (288)
T 1b0a_A 278 ACVEYH 283 (288)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 444433
No 137
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.50 E-value=3.1e-07 Score=82.71 Aligned_cols=77 Identities=19% Similarity=0.306 Sum_probs=66.4
Q ss_pred cCCCEEEEEcCCh-HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhc
Q 021388 142 FTGKTVGIIGLGR-IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDA 220 (313)
Q Consensus 142 l~g~~igiiG~G~-iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~ 220 (313)
+.|+++.|||.|. +|+.+|+.|...|++|++++++ ..++++.+++||+|+.+++. .+++..+.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK---------TKDIGSMTRSSKIVVVAVGR----PGFLNREM--- 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSCHHHHHHHSSEEEECSSC----TTCBCGGG---
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC---------cccHHHhhccCCEEEECCCC----CccccHhh---
Confidence 8899999999986 8999999999999999999864 24789999999999999984 34676655
Q ss_pred cCCCcEEEEcCCCc
Q 021388 221 LGPKGVLINIGRGP 234 (313)
Q Consensus 221 mk~ga~lIn~~rg~ 234 (313)
+|+|+++||+|.-.
T Consensus 212 vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 VTPGSVVIDVGINY 225 (276)
T ss_dssp CCTTCEEEECCCEE
T ss_pred ccCCcEEEEeccCc
Confidence 59999999999765
No 138
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.50 E-value=1e-07 Score=83.27 Aligned_cols=103 Identities=19% Similarity=0.234 Sum_probs=70.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEE-ecCCCCCcc------ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHH
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINY-YSRTEKPNL------KYKYYPSVVELASNCHILVVACPLTEETRHIINRE 216 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~-~~~~~~~~~------~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~ 216 (313)
-++|+|||+|+||..+|+.|...|++|.+ +||+++... +.....+..+.++++|+|++++|. .....++ ++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~-~~ 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIV-TQ 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHH-TT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHH-HH
Confidence 36899999999999999999999999998 999876432 222223455668899999999983 2223222 11
Q ss_pred HHhccCCCcEEEEcCCCcc------------ccHHHHHHHHHhCCe
Q 021388 217 VIDALGPKGVLINIGRGPH------------VDERELVSALVEGRL 250 (313)
Q Consensus 217 ~l~~mk~ga~lIn~~rg~~------------vd~~al~~al~~~~l 250 (313)
... .++.++|+++-|-- ...+.+.+.+...++
T Consensus 101 l~~--~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~v 144 (220)
T 4huj_A 101 VSD--WGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKV 144 (220)
T ss_dssp CSC--CTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEE
T ss_pred hhc--cCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCE
Confidence 212 35889999986541 145666666654333
No 139
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.49 E-value=4.2e-07 Score=82.32 Aligned_cols=81 Identities=17% Similarity=0.263 Sum_probs=68.1
Q ss_pred ccccCCCEEEEEcCCh-HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 139 TTKFTGKTVGIIGLGR-IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~-iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.++.|+++.|||.|. +|+.+|..|...|++|++.+++. .++++.+++||+|+.+++. .+++..+.
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 222 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT---------TDLKSHTTKADILIVAVGK----PNFITADM 222 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------SSHHHHHTTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------hhHHHhcccCCEEEECCCC----CCCCCHHH
Confidence 3469999999999998 69999999999999999987642 3688999999999999983 34576654
Q ss_pred HhccCCCcEEEEcCCCcc
Q 021388 218 IDALGPKGVLINIGRGPH 235 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~ 235 (313)
+|+|+++||++.-.+
T Consensus 223 ---vk~GavVIDvgi~~~ 237 (285)
T 3l07_A 223 ---VKEGAVVIDVGINHV 237 (285)
T ss_dssp ---SCTTCEEEECCCEEE
T ss_pred ---cCCCcEEEEecccCc
Confidence 599999999997653
No 140
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.49 E-value=3.4e-07 Score=83.11 Aligned_cols=106 Identities=12% Similarity=0.139 Sum_probs=75.5
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCcccc------ccCCCHHHHhhcCCEEEEecCCC--hhhhc
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLKY------KYYPSVVELASNCHILVVACPLT--EETRH 211 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~~------~~~~~l~e~~~~aDvV~~~lp~~--~~t~~ 211 (313)
.+.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++.... ....++.+.++++|+|+.++|.. +....
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~ 193 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDS 193 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcC
Confidence 4788999999999999999999999999 899999987653321 11234566688999999999864 22222
Q ss_pred ccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 212 IINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 212 li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+. ...++++.+++|+.-.+.. + .+.++.++..+.
T Consensus 194 ~l~---~~~l~~~~~V~D~vY~P~~-T-~ll~~A~~~G~~ 228 (277)
T 3don_A 194 VIS---LNRLASHTLVSDIVYNPYK-T-PILIEAEQRGNP 228 (277)
T ss_dssp SSC---CTTCCSSCEEEESCCSSSS-C-HHHHHHHHTTCC
T ss_pred CCC---HHHcCCCCEEEEecCCCCC-C-HHHHHHHHCcCE
Confidence 232 3567899999999877543 3 466666665554
No 141
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.48 E-value=1.1e-07 Score=84.09 Aligned_cols=71 Identities=8% Similarity=0.127 Sum_probs=58.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALG 222 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk 222 (313)
..++|||||+|.||.++|+.|+..|++|.+|++. ++ +++|| ++++|.. ....++ +++...++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~-------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~l~ 66 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP-------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAFAR 66 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG-------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTTCC
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH-------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHhcC
Confidence 3468999999999999999999999999999983 12 57899 8899975 455555 56777889
Q ss_pred CCcEEEEcC
Q 021388 223 PKGVLINIG 231 (313)
Q Consensus 223 ~ga~lIn~~ 231 (313)
+|+++++++
T Consensus 67 ~g~ivvd~s 75 (232)
T 3dfu_A 67 RGQMFLHTS 75 (232)
T ss_dssp TTCEEEECC
T ss_pred CCCEEEEEC
Confidence 999999975
No 142
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.47 E-value=3.5e-07 Score=83.38 Aligned_cols=82 Identities=13% Similarity=0.219 Sum_probs=68.2
Q ss_pred ccccCCCEEEEEcCCh-HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHH--HHhhcCCEEEEecCCChhhhcccCH
Q 021388 139 TTKFTGKTVGIIGLGR-IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVV--ELASNCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~-iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~--e~~~~aDvV~~~lp~~~~t~~li~~ 215 (313)
+.++.|+++.|||.|. +|+.+|..|...|++|++++++.. +++ +.+++||+|+.+++. .+++..
T Consensus 160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~---------~l~l~~~~~~ADIVI~Avg~----p~~I~~ 226 (300)
T 4a26_A 160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS---------TEDMIDYLRTADIVIAAMGQ----PGYVKG 226 (300)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC---------HHHHHHHHHTCSEEEECSCC----TTCBCG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC---------CchhhhhhccCCEEEECCCC----CCCCcH
Confidence 3469999999999988 799999999999999999987422 466 899999999999984 346766
Q ss_pred HHHhccCCCcEEEEcCCCccc
Q 021388 216 EVIDALGPKGVLINIGRGPHV 236 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~rg~~v 236 (313)
+. +|+|+++||++.-.+-
T Consensus 227 ~~---vk~GavVIDvgi~~~~ 244 (300)
T 4a26_A 227 EW---IKEGAAVVDVGTTPVP 244 (300)
T ss_dssp GG---SCTTCEEEECCCEEES
T ss_pred Hh---cCCCcEEEEEeccCCc
Confidence 55 5999999999976543
No 143
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.47 E-value=5.8e-07 Score=81.39 Aligned_cols=81 Identities=16% Similarity=0.289 Sum_probs=68.2
Q ss_pred ccccCCCEEEEEcCCh-HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 139 TTKFTGKTVGIIGLGR-IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~-iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.++.|+++.|||.|. +|+.+|..|...|++|++..++. .++++.+++||+|+.+++. .+++..+.
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T---------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 222 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT---------RDLADHVSRADLVVVAAGK----PGLVKGEW 222 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC---------SCHHHHHHTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC---------cCHHHHhccCCEEEECCCC----CCCCCHHH
Confidence 3569999999999987 79999999999999999987642 3688999999999999983 34676655
Q ss_pred HhccCCCcEEEEcCCCcc
Q 021388 218 IDALGPKGVLINIGRGPH 235 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~ 235 (313)
+|+|+++||++.-.+
T Consensus 223 ---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 223 ---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp ---SCTTCEEEECCSCSS
T ss_pred ---cCCCeEEEEeccccc
Confidence 499999999997664
No 144
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.47 E-value=6.4e-07 Score=81.64 Aligned_cols=135 Identities=16% Similarity=0.174 Sum_probs=90.5
Q ss_pred ccccCCCEEEEEcCCh-HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 139 TTKFTGKTVGIIGLGR-IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~-iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.++.|+++.|||.|+ +|+.+|+.|...|++|+++++. ..++.+.+++||+|+.+++. .++|..+.
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~---------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 226 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK---------TAHLDEEVNKGDILVVATGQ----PEMVKGEW 226 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT---------CSSHHHHHTTCSEEEECCCC----TTCBCGGG
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC---------cccHHHHhccCCEEEECCCC----cccCCHHH
Confidence 3469999999999996 6999999999999999998754 24789999999999999984 33577665
Q ss_pred HhccCCCcEEEEcCCCccccHHHHHHHHHhC-CeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHHHHHHHHHH
Q 021388 218 IDALGPKGVLINIGRGPHVDERELVSALVEG-RLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETRKTMADLVL 296 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~~vd~~al~~al~~~-~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~~~~~~~~~ 296 (313)
+|+|+++||+|.-.+-|.. -.+| ++- =||-..+ ..+. --.+||--||.-.-+..-+.+..+
T Consensus 227 ---vk~GavVIDVgi~~~~d~~-----~~~g~klv---GDVdf~~------v~~~-a~~iTPVPGGVGpmTiamLl~Ntv 288 (301)
T 1a4i_A 227 ---IKPGAIVIDCGINYVPDDK-----KPNGRKVV---GDVAYDE------AKER-ASFITPVPGGVGPMTVAMLMQSTV 288 (301)
T ss_dssp ---SCTTCEEEECCCBC---------------CCB---CSBCHHH------HTTT-CSEECCSSSSHHHHHHHHHHHHHH
T ss_pred ---cCCCcEEEEccCCCccccc-----ccCCCeee---ccccHHH------hhhh-ceEeCCCCCCccHHHHHHHHHHHH
Confidence 5799999999987644321 1123 343 2662111 1111 126899778766555544444444
Q ss_pred HHHHHHHc
Q 021388 297 GNLEAHFL 304 (313)
Q Consensus 297 ~nl~~~~~ 304 (313)
+..++++.
T Consensus 289 ~aa~~~~~ 296 (301)
T 1a4i_A 289 ESAKRFLE 296 (301)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 44445443
No 145
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.47 E-value=4.5e-07 Score=81.92 Aligned_cols=110 Identities=19% Similarity=0.291 Sum_probs=82.4
Q ss_pred ccccCCCEEEEEcCChH-HHHHHHHHHhC--CCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCH
Q 021388 139 TTKFTGKTVGIIGLGRI-GMAVAKRAEAF--SCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~i-G~~iA~~l~~~--G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~ 215 (313)
+.++.|+++.|||.|.| |+.+|+.|... |++|++++++. .++.+.+++||+|+.+++.. +++..
T Consensus 153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t---------~~L~~~~~~ADIVI~Avg~p----~~I~~ 219 (281)
T 2c2x_A 153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT---------RDLPALTRQADIVVAAVGVA----HLLTA 219 (281)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC---------SCHHHHHTTCSEEEECSCCT----TCBCG
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch---------hHHHHHHhhCCEEEECCCCC----cccCH
Confidence 34699999999999985 99999999998 89999987653 47899999999999999832 35776
Q ss_pred HHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHH
Q 021388 216 EVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVE 286 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~ 286 (313)
+. +|+|+++||+|.-.+.| | ..=||- |- ..+.. -.+||--||.-.-
T Consensus 220 ~~---vk~GavVIDVgi~r~~~----------g----lvGDVd--~~-----v~~~a-~~iTPVPGGVGpm 265 (281)
T 2c2x_A 220 DM---VRPGAAVIDVGVSRTDD----------G----LVGDVH--PD-----VWELA-GHVSPNPGGVGPL 265 (281)
T ss_dssp GG---SCTTCEEEECCEEEETT----------E----EEESBC--GG-----GGGTC-SEEECSSSSSHHH
T ss_pred HH---cCCCcEEEEccCCCCCC----------C----ccCccc--cc-----hhhhe-eeecCCCCCccHH
Confidence 66 48999999999876443 3 355774 21 11111 2578977776553
No 146
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.47 E-value=1.1e-07 Score=86.74 Aligned_cols=104 Identities=10% Similarity=0.071 Sum_probs=73.5
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc------------CCCHHHHhh---cCCEEEEecC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY------------YPSVVELAS---NCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~------------~~~l~e~~~---~aDvV~~~lp 204 (313)
++|+|||+|.||..+|..|...|++|.+|+|+++... +... ..+..++.+ ++|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 5899999999999999999999999999999764211 1100 013334444 8999999999
Q ss_pred CChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 205 LTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
. .....++ ++..+.+++++++|+++.|- -..+.+.+.+.+.++.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 4 3455454 55667788999999998753 2345666666554444
No 147
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.46 E-value=2.9e-07 Score=84.89 Aligned_cols=90 Identities=16% Similarity=0.179 Sum_probs=69.2
Q ss_pred cccccCCCEEEEEcCChH-HHHHHHHHHhCCCCEEEecCCCCC------cccc--c-c-----C--CCHHHHhhcCCEEE
Q 021388 138 LTTKFTGKTVGIIGLGRI-GMAVAKRAEAFSCPINYYSRTEKP------NLKY--K-Y-----Y--PSVVELASNCHILV 200 (313)
Q Consensus 138 ~~~~l~g~~igiiG~G~i-G~~iA~~l~~~G~~V~~~~~~~~~------~~~~--~-~-----~--~~l~e~~~~aDvV~ 200 (313)
++.++.|+++.|||.|.| |+.+|+.|...|++|+++||+... .... . . . .++.+.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 455799999999999976 999999999999999999886321 1111 1 1 1 46888999999999
Q ss_pred EecCCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 201 VACPLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 201 ~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
.+++.. ..+|..+. +|+|+++||+|..
T Consensus 251 sAtg~p---~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPSE---NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp ECCCCT---TCCBCTTT---SCTTEEEEECSSS
T ss_pred ECCCCC---cceeCHHH---cCCCeEEEEcCCC
Confidence 999742 22366655 4899999999875
No 148
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.45 E-value=5e-08 Score=91.55 Aligned_cols=89 Identities=13% Similarity=0.162 Sum_probs=68.5
Q ss_pred EEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-------------------ccccCCCHHHHhhcCCEEEEecCCC
Q 021388 146 TVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-------------------KYKYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 146 ~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-------------------~~~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
+|+|||+|.||..+|..|...|++|.+|+|+++... +.....+++++++.+|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999998754211 112235788888999999999994
Q ss_pred hhhhcccCHH----HHhccCC-CcEEEEcCCCccc
Q 021388 207 EETRHIINRE----VIDALGP-KGVLINIGRGPHV 236 (313)
Q Consensus 207 ~~t~~li~~~----~l~~mk~-ga~lIn~~rg~~v 236 (313)
.....++ .+ ....+++ ++++|+++.|-..
T Consensus 96 ~~~~~v~-~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 96 QFLRGFF-EKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp HHHHHHH-HHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred HHHHHHH-HHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 4555555 33 5566788 9999999876433
No 149
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.45 E-value=7e-06 Score=77.63 Aligned_cols=83 Identities=17% Similarity=0.180 Sum_probs=69.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHhCCC---CEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHH
Q 021388 143 TGKTVGIIGL-GRIGMAVAKRAEAFSC---PINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVI 218 (313)
Q Consensus 143 ~g~~igiiG~-G~iG~~iA~~l~~~G~---~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l 218 (313)
...++.|||. |..|...++.++++|+ .|.++|++.... +.. + +.+.++|+||.++........+++++.+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~-g~~----~-~~i~~aDivIn~vlig~~aP~Lvt~e~v 286 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR-GGP----F-DEIPQADIFINCIYLSKPIAPFTNMEKL 286 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT-CSC----C-THHHHSSEEEECCCCCSSCCCSCCHHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc-CCc----h-hhHhhCCEEEECcCcCCCCCcccCHHHH
Confidence 4568999999 9999999999999998 899999875222 211 1 3466999999999986667789999999
Q ss_pred hcc-CCCcEEEEcC
Q 021388 219 DAL-GPKGVLINIG 231 (313)
Q Consensus 219 ~~m-k~ga~lIn~~ 231 (313)
+.| |||+++||++
T Consensus 287 ~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 287 NNPNRRLRTVVDVS 300 (394)
T ss_dssp CCTTCCCCEEEETT
T ss_pred hcCcCCCeEEEEEe
Confidence 999 9999999996
No 150
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.41 E-value=1.8e-07 Score=86.85 Aligned_cols=82 Identities=18% Similarity=0.252 Sum_probs=63.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----c-----------cccCCCHHHHhhcCCEEEEecCCChh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----K-----------YKYYPSVVELASNCHILVVACPLTEE 208 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~-----------~~~~~~l~e~~~~aDvV~~~lp~~~~ 208 (313)
.+|+|||+|.||..+|..|...|++|.+|+|+++... + .....+.++ +..+|+|++++|. ..
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~~ 92 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-QY 92 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-GG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-HH
Confidence 5899999999999999999999999999999754211 1 233456778 8899999999993 44
Q ss_pred hhcccCHHHHhccC-CCcEEEEcCCC
Q 021388 209 TRHIINREVIDALG-PKGVLINIGRG 233 (313)
Q Consensus 209 t~~li~~~~l~~mk-~ga~lIn~~rg 233 (313)
+..++ ..++ +++++|+++.|
T Consensus 93 ~~~v~-----~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 93 IREHL-----LRLPVKPSMVLNLSKG 113 (335)
T ss_dssp HHHHH-----TTCSSCCSEEEECCCC
T ss_pred HHHHH-----HHhCcCCCEEEEEeCC
Confidence 44443 3343 78999999976
No 151
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.40 E-value=5.9e-07 Score=82.26 Aligned_cols=106 Identities=14% Similarity=0.192 Sum_probs=76.1
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCcc------cc---cc--CCCHHHHhhcCCEEEEecCCChh
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNL------KY---KY--YPSVVELASNCHILVVACPLTEE 208 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~------~~---~~--~~~l~e~~~~aDvV~~~lp~~~~ 208 (313)
.+.|++++|+|.|.+|++++..|...|+ +|.+++|+.++.. +. .. ..++.+.+.++|+|+.++|....
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~ 217 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMH 217 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCS
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCC
Confidence 4778999999999999999999999998 8999999864321 11 11 12455677899999999996542
Q ss_pred hh--c-ccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 209 TR--H-IINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 209 t~--~-li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.. . .+. ...++++.+++|++-.+ ..+. |.++.++..+.
T Consensus 218 ~~~~~~~i~---~~~l~~~~~v~D~~y~P-~~T~-ll~~A~~~G~~ 258 (297)
T 2egg_A 218 PRVEVQPLS---LERLRPGVIVSDIIYNP-LETK-WLKEAKARGAR 258 (297)
T ss_dssp SCCSCCSSC---CTTCCTTCEEEECCCSS-SSCH-HHHHHHHTTCE
T ss_pred CCCCCCCCC---HHHcCCCCEEEEcCCCC-CCCH-HHHHHHHCcCE
Confidence 11 1 122 24578999999999853 3333 66666666654
No 152
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.38 E-value=7.8e-07 Score=79.63 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=74.6
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc------cccCCCHHHHhhcCCEEEEecCCChhh-hccc
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK------YKYYPSVVELASNCHILVVACPLTEET-RHII 213 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~------~~~~~~l~e~~~~aDvV~~~lp~~~~t-~~li 213 (313)
+.| +++|||.|.+|++++..|...|+ +|.+++|+.++... .....++.+.++++|+|++++|..-.. ...+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i 185 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPV 185 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCC
Confidence 577 99999999999999999999999 89999998754221 112456778889999999999854211 1234
Q ss_pred CHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 214 NREVIDALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 214 ~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
..+ .++++.+++|+.-+ .++-+.++.+.|
T Consensus 186 ~~~---~l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 186 SDD---SLKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CHH---HHTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CHH---HhCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 433 35789999999988 556666666665
No 153
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.25 E-value=1e-06 Score=79.55 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=72.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccccc----cCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYK----YYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~----~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
|+++.|+|.|.+|++++..|...|.+|.+++|+.++..... ...+++++ .++|+|+.++|........++.+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l-~~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPK-SAFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCS-SCCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHh-ccCCEEEEcccCCCCCCCCCChHHHH
Confidence 78999999999999999999999988999999986532110 01122332 38999999999754322345555333
Q ss_pred -ccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 220 -ALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 220 -~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.++++.+++|+.-.+ .+. +.++.++..+.
T Consensus 197 ~~l~~~~~v~D~vY~P--~T~-ll~~A~~~G~~ 226 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF--LTP-FLSLAKELKTP 226 (269)
T ss_dssp HHHHHCSEEEESCCSS--CCH-HHHHHHHTTCC
T ss_pred hhCCCCCEEEEeCCCC--chH-HHHHHHHCcCE
Confidence 677899999998876 444 55555555444
No 154
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.23 E-value=3.6e-06 Score=68.47 Aligned_cols=102 Identities=21% Similarity=0.207 Sum_probs=76.3
Q ss_pred CCCEEEEEcC----ChHHHHHHHHHHhCCCCEEEecCC--CCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHH
Q 021388 143 TGKTVGIIGL----GRIGMAVAKRAEAFSCPINYYSRT--EKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINRE 216 (313)
Q Consensus 143 ~g~~igiiG~----G~iG~~iA~~l~~~G~~V~~~~~~--~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~ 216 (313)
.-++|+|||. |++|..+++.|+..|++|+..++. .+...+...+.+++++-...|++++++|. +....++ ++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~-~~ 89 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPP-SALMDHL-PE 89 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH-HH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHH-HH
Confidence 3468999999 899999999999999997777766 33344556677899988899999999995 5555565 34
Q ss_pred HHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 217 VIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 217 ~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
..+ ...+.++++.+.. ++++.+.+++..++
T Consensus 90 ~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 90 VLA-LRPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp HHH-HCCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred HHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 444 3445677665443 57888888887776
No 155
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.23 E-value=1.1e-06 Score=83.73 Aligned_cols=89 Identities=21% Similarity=0.307 Sum_probs=70.0
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCC-----------CccccccCCCHHHHhhcCCEEEEecCCChhh
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEK-----------PNLKYKYYPSVVELASNCHILVVACPLTEET 209 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~-----------~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t 209 (313)
-|+||+|+|||||+-|++-|.+|+..|.+|.+--|... ...|+. ..+..|++++||+|++.+|+..+.
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~-v~~~~eA~~~ADvV~~L~PD~~q~ 112 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFK-VGTYEELIPQADLVINLTPDKQHS 112 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCE-EEEHHHHGGGCSEEEECSCGGGHH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCE-ecCHHHHHHhCCEEEEeCChhhHH
Confidence 38999999999999999999999999999987655211 122333 347899999999999999975444
Q ss_pred hcccCHHHHhccCCCcEEEEcCCC
Q 021388 210 RHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
. ++ ++..+.||+|+.+. .+.|
T Consensus 113 ~-vy-~~I~p~lk~G~~L~-faHG 133 (491)
T 3ulk_A 113 D-VV-RTVQPLMKDGAALG-YSHG 133 (491)
T ss_dssp H-HH-HHHGGGSCTTCEEE-ESSC
T ss_pred H-HH-HHHHhhCCCCCEEE-ecCc
Confidence 3 45 56999999999987 4565
No 156
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.22 E-value=3.1e-06 Score=81.49 Aligned_cols=133 Identities=15% Similarity=0.170 Sum_probs=87.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc------------cc-------------cccCCCHHHHhhcCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN------------LK-------------YKYYPSVVELASNCH 197 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~------------~~-------------~~~~~~l~e~~~~aD 197 (313)
+-.+|+|||+|-+|..+|..+...|++|+++|.++++. .+ .....+.++.++.||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 44699999999999999999999999999999875421 01 112457788899999
Q ss_pred EEEEecCCChhhhcccC--------HHHHhccC---CCcEEEEcCCCccccHHHHHHH-HHhCCeeEEEec-CCCCCCCC
Q 021388 198 ILVVACPLTEETRHIIN--------REVIDALG---PKGVLINIGRGPHVDERELVSA-LVEGRLGGAGLD-VFENEPHV 264 (313)
Q Consensus 198 vV~~~lp~~~~t~~li~--------~~~l~~mk---~ga~lIn~~rg~~vd~~al~~a-l~~~~l~ga~lD-V~~~Ep~~ 264 (313)
++++|+|......+-.+ +...+.|+ +|.++|.-|+-.+=..+.+..- +++.. .+.-++ ++.+|-+.
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~~~PErl~ 178 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVASNPEFLR 178 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEEECCCCCC
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceeecCccccc
Confidence 99999984322111111 23334454 6889999999888666665543 33322 211122 25677654
Q ss_pred CC----cccCCCceEE
Q 021388 265 PE----ELFGLENVVL 276 (313)
Q Consensus 265 ~~----~L~~~pnv~l 276 (313)
+. .+...++|++
T Consensus 179 eG~a~~d~~~~~riVi 194 (444)
T 3vtf_A 179 EGSALEDFFKPDRIVI 194 (444)
T ss_dssp TTSHHHHHHSCSCEEE
T ss_pred CCccccccccCCcEEE
Confidence 43 3666777763
No 157
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.18 E-value=6.6e-06 Score=67.15 Aligned_cols=101 Identities=20% Similarity=0.186 Sum_probs=75.5
Q ss_pred CCEEEEEcC----ChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHh
Q 021388 144 GKTVGIIGL----GRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVID 219 (313)
Q Consensus 144 g~~igiiG~----G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~ 219 (313)
-++|+|||. |.+|..+++.|+..|++|+..++......+...+.+++++....|++++++|. +....++ ++..+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv-~~~~~ 99 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYV-EQAIK 99 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHH-HHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH-HHHHH
Confidence 579999999 79999999999999999777777654444556677899988899999999995 4445555 33333
Q ss_pred ccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 220 ALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
...+.++++.+. .++++.+++++..+.
T Consensus 100 -~gi~~i~~~~g~----~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 100 -KGAKVVWFQYNT----YNREASKKADEAGLI 126 (144)
T ss_dssp -HTCSEEEECTTC----CCHHHHHHHHHTTCE
T ss_pred -cCCCEEEECCCc----hHHHHHHHHHHcCCE
Confidence 334566665432 378888888888776
No 158
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.15 E-value=4.7e-07 Score=81.76 Aligned_cols=82 Identities=13% Similarity=0.057 Sum_probs=54.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCE-EEecCCCCCcc------ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPI-NYYSRTEKPNL------KYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V-~~~~~~~~~~~------~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
++|||||+|+||+.+++.|... ++| .+||++++... +. ...+++++++++|+|++++|... . .+.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~-----~~v 74 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-I-----KTV 74 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-H-----HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-H-----HHH
Confidence 4799999999999999999877 888 58998765321 22 34567778889999999999543 2 333
Q ss_pred Hhcc-CCCcEEEEcCCCc
Q 021388 218 IDAL-GPKGVLINIGRGP 234 (313)
Q Consensus 218 l~~m-k~ga~lIn~~rg~ 234 (313)
+..+ +++.++||++.+.
T Consensus 75 ~~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 75 ANHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp HTTTCCSSCCEEECCSSS
T ss_pred HHHhccCCCEEEECCCCC
Confidence 3334 6889999998653
No 159
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.12 E-value=5.6e-06 Score=76.22 Aligned_cols=105 Identities=18% Similarity=0.175 Sum_probs=75.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc---cc---------------cccCCCHHHHhhcCCEEEEecCCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN---LK---------------YKYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~---~~---------------~~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
++|+|||.|.||..+|..|...|.+|.+|+|+.... .+ .....+.+++.+.+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~~ 82 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVV 82 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCCC
Confidence 589999999999999999999999999999875210 01 011245666666899999999955
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeE
Q 021388 207 EETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGG 252 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~g 252 (313)
. +..++ +.+...+++++++|.+..|= -..+.+.+.+...++.+
T Consensus 83 ~-~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl~ 125 (320)
T 3i83_A 83 E-GADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVIS 125 (320)
T ss_dssp T-TCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEEE
T ss_pred C-hHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEEE
Confidence 4 33333 55666788899999988762 23466777776655543
No 160
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.12 E-value=1.3e-05 Score=65.74 Aligned_cols=94 Identities=15% Similarity=0.060 Sum_probs=61.8
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------cccc----CCC---HHHH-hhcCCEEEEecC
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KYKY----YPS---VVEL-ASNCHILVVACP 204 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~~~----~~~---l~e~-~~~aDvV~~~lp 204 (313)
+....+++|.|+|+|.+|+.+++.|+..|++|.+++++++... +... ..+ +.+. +..+|+|+.++|
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 4457889999999999999999999999999999998765321 2111 112 2222 568999999998
Q ss_pred CChhhhcccCHHHHhccCCCcEEEEcCCCc
Q 021388 205 LTEETRHIINREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga~lIn~~rg~ 234 (313)
....+..+ ...+..+.+...+|-..++.
T Consensus 94 ~~~~~~~~--~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 94 DDSTNFFI--SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp CHHHHHHH--HHHHHHTSCCSEEEEECSSG
T ss_pred CcHHHHHH--HHHHHHHCCCCeEEEEECCH
Confidence 54433222 33445445556666655554
No 161
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.12 E-value=9.4e-07 Score=80.65 Aligned_cols=100 Identities=10% Similarity=0.136 Sum_probs=70.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-----C-CCEEEecCCCCC-----c-cccccCC-------------CHHHHhhcCCEE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-----S-CPINYYSRTEKP-----N-LKYKYYP-------------SVVELASNCHIL 199 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-----G-~~V~~~~~~~~~-----~-~~~~~~~-------------~l~e~~~~aDvV 199 (313)
++|+|||+|.||..+|..|... | ++|.+|+| ++. . .+..... +..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 4899999999999999999988 9 99999998 431 1 2221111 223457889999
Q ss_pred EEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccH-HHHHHHHHhCC
Q 021388 200 VVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDE-RELVSALVEGR 249 (313)
Q Consensus 200 ~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~-~al~~al~~~~ 249 (313)
++++|... ...++ ++..+.+++++++|++..| ++. +.+.+.+.+.+
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG--~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG--ADIAERMRTYLPDTV 134 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS--SSHHHHHTTTSCTTT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC--CCcHHHHHHHCCCCc
Confidence 99999654 34444 4555667889999998776 343 55666564433
No 162
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.11 E-value=6.1e-06 Score=76.20 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=76.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----------------c--------------cccCCCHHHH
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----------------K--------------YKYYPSVVEL 192 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~--------------~~~~~~l~e~ 192 (313)
.-++|+|||.|.||+.+|..+...|++|..||++++... + .....++++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 346899999999999999999999999999998764200 0 0123578889
Q ss_pred hhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHH
Q 021388 193 ASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALV 246 (313)
Q Consensus 193 ~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~ 246 (313)
+++||+|+=++|-+-+.+.-+-+++=+.++++++|-..+.+ +....+.+.+.
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~ 136 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLA 136 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCT
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhcc
Confidence 99999999999988887766656677778999998544433 34456666553
No 163
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.09 E-value=2.6e-06 Score=78.95 Aligned_cols=106 Identities=14% Similarity=0.180 Sum_probs=75.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCC----cccc-------------ccCCCHHHHhhcCCEEEEecCCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKP----NLKY-------------KYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~----~~~~-------------~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
.++|+|||.|.||..+|..|...|++|.+|+|.... ..+. ....+.++ +..+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 368999999999999999999999999999985321 0111 11246666 5889999999995
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCCCc------------------cccHHHHHHHHHhCCeeE
Q 021388 207 EETRHIINREVIDALGPKGVLINIGRGP------------------HVDERELVSALVEGRLGG 252 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~rg~------------------~vd~~al~~al~~~~l~g 252 (313)
.++..++ ++....+++++++|.+..|= +-.++.+.+.+...++.+
T Consensus 81 ~~~~~~~-~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~ 143 (335)
T 3ghy_A 81 PALESVA-AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLG 143 (335)
T ss_dssp HHHHHHH-GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEE
T ss_pred hhHHHHH-HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEE
Confidence 3455444 44555678899999998882 223456677776556543
No 164
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.08 E-value=3e-06 Score=78.05 Aligned_cols=99 Identities=16% Similarity=0.215 Sum_probs=69.3
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cc-------------cccCCCHHHHhhcCCEEEEec
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LK-------------YKYYPSVVELASNCHILVVAC 203 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~-------------~~~~~~l~e~~~~aDvV~~~l 203 (313)
...++|+|||.|.||..+|..|...|++|..| ++++.. .+ .....+.++ +..+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 45679999999999999999999999999999 654311 01 011234544 57899999999
Q ss_pred CCChhhhcccCHHHHhccCCCcEEEEcCCCccccH-HHHHHHHH
Q 021388 204 PLTEETRHIINREVIDALGPKGVLINIGRGPHVDE-RELVSALV 246 (313)
Q Consensus 204 p~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~-~al~~al~ 246 (313)
|.. ++..++ ++....+++++++|.+..| ++. +.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nG--i~~~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNG--VENADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSS--SSHHHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCC--CCcHHHHHHHcC
Confidence 954 455444 5566678899999999777 343 45555554
No 165
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.08 E-value=7.3e-06 Score=76.71 Aligned_cols=87 Identities=20% Similarity=0.191 Sum_probs=65.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-hCCC-CEEEecCCCCCcc----------c--cccCCCHHHHhhcCCEEEEecCCChh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAE-AFSC-PINYYSRTEKPNL----------K--YKYYPSVVELASNCHILVVACPLTEE 208 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~-~~G~-~V~~~~~~~~~~~----------~--~~~~~~l~e~~~~aDvV~~~lp~~~~ 208 (313)
..++++|||.|.||+.+++.+. ..+. +|.+|||++++.. + .....+++++++++|+|++|+|...
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 4579999999999999998875 3454 6999999865311 2 2335689999999999999999752
Q ss_pred hhcccCHHHHhccCCCcEEEEcCCC
Q 021388 209 TRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 209 t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
...++.. +.+++|..++++|..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 2345543 467899999999863
No 166
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.07 E-value=1.6e-05 Score=73.28 Aligned_cols=84 Identities=20% Similarity=0.245 Sum_probs=64.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHh-CCC-CEEEecCCCCCcc---------cc--ccCCCHHHHhhcCCEEEEecCCChhh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEA-FSC-PINYYSRTEKPNL---------KY--KYYPSVVELASNCHILVVACPLTEET 209 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~-~G~-~V~~~~~~~~~~~---------~~--~~~~~l~e~~~~aDvV~~~lp~~~~t 209 (313)
..++++|||.|.||+.+++.+.. ++. +|.+|||+ +... +. ... +++++++++|+|++|+|..
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~--- 194 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRST--- 194 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCS---
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCC---
Confidence 35799999999999999999875 454 69999999 3211 11 234 8999999999999999864
Q ss_pred hcccCHHHHhccCCCcEEEEcCCCc
Q 021388 210 RHIINREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~rg~ 234 (313)
..++.. ..+++|+.++++|...
T Consensus 195 ~pvl~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 195 TPLFAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp SCSSCG---GGCCTTCEEEECCCSS
T ss_pred CcccCH---HHcCCCcEEEECCCCC
Confidence 345543 4589999999998643
No 167
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.06 E-value=1.5e-05 Score=73.00 Aligned_cols=104 Identities=13% Similarity=0.200 Sum_probs=74.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc---ccc--------------ccCCCHHHHhhcCCEEEEecCCCh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN---LKY--------------KYYPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~---~~~--------------~~~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
++|+|||.|.||..+|..|...|.+|.+|+|+.... .+. ....+.++ +..+|+|++++|...
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~~ 81 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTFA 81 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCCC
Confidence 579999999999999999999999999999875210 010 01234544 678999999998432
Q ss_pred hhhcccCHHHHhccCCCcEEEEcCCCcccc-HHHHHHHHHhCCeeEE
Q 021388 208 ETRHIINREVIDALGPKGVLINIGRGPHVD-ERELVSALVEGRLGGA 253 (313)
Q Consensus 208 ~t~~li~~~~l~~mk~ga~lIn~~rg~~vd-~~al~~al~~~~l~ga 253 (313)
+..++ +++...+++++++|.+.-| ++ .+.+.+.+...++.++
T Consensus 82 -~~~~l-~~l~~~l~~~~~iv~l~nG--i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 82 -NSRYE-ELIRPLVEEGTQILTLQNG--LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp -GGGHH-HHHGGGCCTTCEEEECCSS--SSHHHHHHHHTCGGGEEEE
T ss_pred -cHHHH-HHHHhhcCCCCEEEEecCC--CCcHHHHHHHCCCCcEEEE
Confidence 33333 5566678899999998877 43 5667777766665543
No 168
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.04 E-value=2.7e-06 Score=71.59 Aligned_cols=91 Identities=16% Similarity=0.165 Sum_probs=63.7
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhC-CCCEEEecCCCCCc-----ccccc----CCC---HHHH--hhcCCEEEEecC
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAF-SCPINYYSRTEKPN-----LKYKY----YPS---VVEL--ASNCHILVVACP 204 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~-G~~V~~~~~~~~~~-----~~~~~----~~~---l~e~--~~~aDvV~~~lp 204 (313)
.++.+++++|+|+|.+|+.+|+.|+.. |++|.++|++++.. .+... ..+ +.++ +.++|+|++++|
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 357788999999999999999999999 99999999876532 12211 122 3333 668999999998
Q ss_pred CChhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 205 LTEETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
..+.+..++ ..+..+.+...+|....
T Consensus 115 ~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 115 HHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp SHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred ChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 655544432 35566666666665433
No 169
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.02 E-value=2.3e-05 Score=73.76 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=74.5
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCC----CCCc---c------------ccccCCCHHHHhhcCCE
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRT----EKPN---L------------KYKYYPSVVELASNCHI 198 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~----~~~~---~------------~~~~~~~l~e~~~~aDv 198 (313)
+.++.+.+|.|+|.|.+|..+|+.|.+.|. +|+++|++ .... . ......++.|.++.+|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADV 266 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADF 266 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSE
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCE
Confidence 346888999999999999999999999999 69999987 4321 1 01124579999999999
Q ss_pred EEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcc
Q 021388 199 LVVACPLTEETRHIINREVIDALGPKGVLINIGRGPH 235 (313)
Q Consensus 199 V~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~ 235 (313)
++-+.. .++++++.++.|+++++++.+++...
T Consensus 267 lIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 267 FIGVSR-----GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp EEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred EEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 877632 37899999999999999999997553
No 170
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.02 E-value=4.1e-06 Score=78.88 Aligned_cols=113 Identities=16% Similarity=0.078 Sum_probs=79.2
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc----c-------ccCCCHHHHhhcCCEEEEecCCChhh
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK----Y-------KYYPSVVELASNCHILVVACPLTEET 209 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~----~-------~~~~~l~e~~~~aDvV~~~lp~~~~t 209 (313)
+-++++|+|||+|.||+.+++.|... .+|.++||+.++... . ....+++++++++|+|++++|.....
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~ 91 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF 91 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH
Confidence 45788999999999999999999887 889999998753211 1 01235778899999999998843221
Q ss_pred hcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCC
Q 021388 210 RHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEP 262 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep 262 (313)
. + ..+.++.|..++|++-. .-+..+|.+..++..+. .+.-..-.|
T Consensus 92 -~-v---~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~--~l~g~G~dP 136 (365)
T 2z2v_A 92 -K-S---IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT--IVFDAGFAP 136 (365)
T ss_dssp -H-H---HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE--EECSCBTTT
T ss_pred -H-H---HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE--EEECCCCcc
Confidence 1 2 23456789999998853 34456778888777776 555555555
No 171
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.93 E-value=2.3e-05 Score=62.15 Aligned_cols=85 Identities=15% Similarity=0.193 Sum_probs=57.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------cccc----CCCHHHH----hhcCCEEEEecCCChhh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KYKY----YPSVVEL----ASNCHILVVACPLTEET 209 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~~~----~~~l~e~----~~~aDvV~~~lp~~~~t 209 (313)
+++|+|+|+|.+|+.+++.|...|++|.++|++++... +... ..+.+.+ +.++|+|++++|....+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57899999999999999999999999999998764211 2111 1222222 56899999999864333
Q ss_pred hcccCHHHHhccCCCcEEEEc
Q 021388 210 RHIINREVIDALGPKGVLINI 230 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~ 230 (313)
. .-......++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 223455667777666544
No 172
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.91 E-value=9.1e-06 Score=65.57 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=59.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----ccccc----CCC---HHHH-hhcCCEEEEecCCChhhh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKY----YPS---VVEL-ASNCHILVVACPLTEETR 210 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~----~~~---l~e~-~~~aDvV~~~lp~~~~t~ 210 (313)
..++.|+|+|.+|+.+|+.|+..|++|.++|++++.. .+... ..+ ++++ +.++|+|++++|....+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 3579999999999999999999999999999987532 12211 122 2222 568999999999766554
Q ss_pred cccCHHHHhccCCCcEEEEc
Q 021388 211 HIINREVIDALGPKGVLINI 230 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~ 230 (313)
.+ ...+..+.++..+|-.
T Consensus 87 ~~--~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 87 EI--VASARAKNPDIEIIAR 104 (140)
T ss_dssp HH--HHHHHHHCSSSEEEEE
T ss_pred HH--HHHHHHHCCCCeEEEE
Confidence 33 2345556666666543
No 173
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.90 E-value=4.8e-05 Score=69.17 Aligned_cols=79 Identities=16% Similarity=0.270 Sum_probs=65.2
Q ss_pred ccccCCCEEEEEcCCh-HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHH
Q 021388 139 TTKFTGKTVGIIGLGR-IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~-iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
+.++.||++.|||-++ +|+++|..|...|++|+.+.... .++.+.+++||+|+.++.- .+++..+.
T Consensus 174 ~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T---------~dl~~~~~~ADIvV~A~G~----p~~i~~d~ 240 (303)
T 4b4u_A 174 NIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT---------QNLPELVKQADIIVGAVGK----AELIQKDW 240 (303)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC---------SSHHHHHHTCSEEEECSCS----TTCBCGGG
T ss_pred CCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC---------CCHHHHhhcCCeEEeccCC----CCcccccc
Confidence 4579999999999887 59999999999999998876432 3689999999999998862 35676654
Q ss_pred HhccCCCcEEEEcCCC
Q 021388 218 IDALGPKGVLINIGRG 233 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg 233 (313)
.|+|+++||+|--
T Consensus 241 ---vk~GavVIDVGin 253 (303)
T 4b4u_A 241 ---IKQGAVVVDAGFH 253 (303)
T ss_dssp ---SCTTCEEEECCCB
T ss_pred ---ccCCCEEEEecee
Confidence 6899999999854
No 174
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.88 E-value=1.4e-05 Score=73.51 Aligned_cols=108 Identities=14% Similarity=0.166 Sum_probs=70.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEEEecCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
.++|+|||.|.||..+|..+...|+ +|..||++++...+ .....++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999998888 89999998753211 0112456 678999999999842
Q ss_pred Ch-----------hhhcc---cCHHHHhccCCCcEEEEcCCCccccHHHHHHHHH--hCCeeEE
Q 021388 206 TE-----------ETRHI---INREVIDALGPKGVLINIGRGPHVDERELVSALV--EGRLGGA 253 (313)
Q Consensus 206 ~~-----------~t~~l---i~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~--~~~l~ga 253 (313)
.. .+..+ +-++. ....|++++++++...-+....+.+... ..++.|.
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i-~~~~~~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~ 145 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGV-KKYCPNAFVICITNPLDVMVSHFQKVSGLPHNKVCGM 145 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHH-HHHCTTSEEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHH-HHHCCCcEEEEeCChHHHHHHHHHHhhCCCHHHEEec
Confidence 11 11111 11222 2235799999998765555555655542 3345543
No 175
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.87 E-value=8.6e-06 Score=77.28 Aligned_cols=84 Identities=7% Similarity=0.068 Sum_probs=61.9
Q ss_pred CEEEEEcCChHHHHHHHHHHh-CCCCEEEec---CCCCC------ccc---------c----------ccCCCHHHHhhc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEA-FSCPINYYS---RTEKP------NLK---------Y----------KYYPSVVELASN 195 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~-~G~~V~~~~---~~~~~------~~~---------~----------~~~~~l~e~~~~ 195 (313)
++|+|||.|.||..+|..|.. .|++|.+|+ ++++. ..+ . ....++++.++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 489999999999999999987 599999999 64221 001 1 123467788899
Q ss_pred CCEEEEecCCChhhhcccCHHHHhccCCCcEEEEc
Q 021388 196 CHILVVACPLTEETRHIINREVIDALGPKGVLINI 230 (313)
Q Consensus 196 aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~ 230 (313)
+|+|++++|... ...++ ++....+++++++++.
T Consensus 83 aD~Vilav~~~~-~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAFA-HEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGGG-HHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchHH-HHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999543 33333 4555677889999984
No 176
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.87 E-value=3.1e-05 Score=71.51 Aligned_cols=82 Identities=18% Similarity=0.307 Sum_probs=63.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHh-CCC-CEEEecCCCCCcc-----------ccccCCCHHHHhhcCCEEEEecCCChhh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEA-FSC-PINYYSRTEKPNL-----------KYKYYPSVVELASNCHILVVACPLTEET 209 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~-~G~-~V~~~~~~~~~~~-----------~~~~~~~l~e~~~~aDvV~~~lp~~~~t 209 (313)
..++++|||.|.+|+.+++.+.. .+. +|.+|||++++.. ... +.++++++ ++|+|++++|..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~--- 198 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSR--- 198 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCS---
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCC---
Confidence 45799999999999999999876 444 6999999875321 123 56888999 999999999954
Q ss_pred hcccCHHHHhccCCCcEEEEcCC
Q 021388 210 RHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~r 232 (313)
..++.. ..+++|..++++|.
T Consensus 199 ~pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 199 KPVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp SCCBCG---GGCCTTCEEEECSC
T ss_pred CceecH---HHcCCCeEEEECCC
Confidence 244543 46789999999964
No 177
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.86 E-value=1.8e-05 Score=60.89 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=57.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCC-CCEEEecCCCCCcc-----ccc-------cCCCHHHHhhcCCEEEEecCCChhh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFS-CPINYYSRTEKPNL-----KYK-------YYPSVVELASNCHILVVACPLTEET 209 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G-~~V~~~~~~~~~~~-----~~~-------~~~~l~e~~~~aDvV~~~lp~~~~t 209 (313)
.+++|+|+|.|.||+.+++.|...| ++|.+++|+++... +.. ...++.++++.+|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 4579999999999999999999999 89999998764311 111 11235567789999999987432 1
Q ss_pred hcccCHHHHhccCCCcEEEEcC
Q 021388 210 RHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~ 231 (313)
..++ -...+.|...++.+
T Consensus 83 ~~~~----~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIA----KAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHH----HHHHHTTCEEECCC
T ss_pred HHHH----HHHHHhCCCEEEec
Confidence 2121 11234566677765
No 178
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.86 E-value=8e-06 Score=73.62 Aligned_cols=96 Identities=14% Similarity=0.047 Sum_probs=61.0
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc------c--c-cCCCHHHHhh-cCCEEEEecCCChhhh
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK------Y--K-YYPSVVELAS-NCHILVVACPLTEETR 210 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~------~--~-~~~~l~e~~~-~aDvV~~~lp~~~~t~ 210 (313)
.+.+++++|+|.|.+|++++..|...|.+|.+++|+.++... . . ...+++++.+ ++|+|+.++|......
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~ 195 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGG 195 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-----
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCCC
Confidence 477899999999999999999999999999999998643211 0 0 0123334333 8999999998654211
Q ss_pred c-ccCHHHHhccCCCcEEEEcCCCccccHH
Q 021388 211 H-IINREVIDALGPKGVLINIGRGPHVDER 239 (313)
Q Consensus 211 ~-li~~~~l~~mk~ga~lIn~~rg~~vd~~ 239 (313)
- -+..+. ++++.+++|+.-....+.+
T Consensus 196 ~~~i~~~~---l~~~~~v~D~~y~p~~~t~ 222 (272)
T 1p77_A 196 TASVDAEI---LKLGSAFYDMQYAKGTDTP 222 (272)
T ss_dssp --CCCHHH---HHHCSCEEESCCCTTSCCH
T ss_pred CCCCCHHH---cCCCCEEEEeeCCCCcCCH
Confidence 0 122222 3456666776665444344
No 179
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.85 E-value=6.3e-06 Score=74.96 Aligned_cols=90 Identities=16% Similarity=0.138 Sum_probs=64.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----ccc---ccCCCHHHHh-hcCCEEEEecCCChhhhcccCH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKY---KYYPSVVELA-SNCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~---~~~~~l~e~~-~~aDvV~~~lp~~~~t~~li~~ 215 (313)
++|+|||.|.||..+|..|...|.+|.+|+|+.+.. .+. ....+..+.+ ..+|+|++++|.. ++..++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l-~ 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVI-P 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHG-G
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHH-H
Confidence 579999999999999999998899999999985421 111 0111233433 7899999999844 344444 4
Q ss_pred HHHhccCCCcEEEEcCCCccc
Q 021388 216 EVIDALGPKGVLINIGRGPHV 236 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~rg~~v 236 (313)
+....+++++++|.+.-|=-.
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHhhCCCCEEEEeccCccc
Confidence 455667788999999887433
No 180
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.84 E-value=8.7e-06 Score=73.89 Aligned_cols=104 Identities=13% Similarity=0.054 Sum_probs=71.1
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc------c---ccCCCHHHHhhcCCEEEEecCCChhhh
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK------Y---KYYPSVVELASNCHILVVACPLTEETR 210 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~------~---~~~~~l~e~~~~aDvV~~~lp~~~~t~ 210 (313)
++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++... . ....+++++..++|+|+.++|......
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGE 202 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC---
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCC
Confidence 5789999999999999999999999997 89999998653211 0 112245555578999999999764322
Q ss_pred -cccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCC
Q 021388 211 -HIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGR 249 (313)
Q Consensus 211 -~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~ 249 (313)
..+.. ..++++.+++|+.-.+ ..+.-| ++.++..
T Consensus 203 ~~~l~~---~~l~~~~~V~DlvY~P-~~T~ll-~~A~~~G 237 (281)
T 3o8q_A 203 LPAIDP---VIFSSRSVCYDMMYGK-GYTVFN-QWARQHG 237 (281)
T ss_dssp -CSCCG---GGEEEEEEEEESCCCS-SCCHHH-HHHHHTT
T ss_pred CCCCCH---HHhCcCCEEEEecCCC-ccCHHH-HHHHHCC
Confidence 12332 3467888999988664 344444 4444443
No 181
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.83 E-value=3.1e-05 Score=69.61 Aligned_cols=90 Identities=17% Similarity=0.115 Sum_probs=63.4
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------cc---ccCCCHHHHh-hcCCEEEEecCCChhhh
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KY---KYYPSVVELA-SNCHILVVACPLTEETR 210 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~---~~~~~l~e~~-~~aDvV~~~lp~~~~t~ 210 (313)
.+.|+++.|+|.|.+|+++++.|...|.+|.+++|+.++.. +. ....+++++. .++|+|+.++|.....
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~- 194 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG- 194 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT-
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCC-
Confidence 46789999999999999999999999999999999864321 10 0012333433 5899999999865431
Q ss_pred cc--cCHHHHhccCCCcEEEEcCCCc
Q 021388 211 HI--INREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 211 ~l--i~~~~l~~mk~ga~lIn~~rg~ 234 (313)
.+ +.. ..++++.+++|+.-..
T Consensus 195 ~~~~i~~---~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 195 DIPAIPS---SLIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCCG---GGCCTTCEEEESCCCS
T ss_pred CCCCCCH---HHcCCCCEEEEeccCC
Confidence 11 222 2357888888888764
No 182
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.79 E-value=2.1e-05 Score=62.58 Aligned_cols=90 Identities=16% Similarity=0.183 Sum_probs=57.7
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccc----cCCCHH---HH-hhcCCEEEEecCCChh
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYK----YYPSVV---EL-ASNCHILVVACPLTEE 208 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~----~~~~l~---e~-~~~aDvV~~~lp~~~~ 208 (313)
+.++++.|+|+|.+|+.+++.|...|++|.++|++++.. .+.. ...+.+ ++ +.++|+|+.+++...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 567789999999999999999999999999999865421 1111 112222 22 5689999999986522
Q ss_pred hhcccCHHHHhccCCCcEEEEcCCC
Q 021388 209 TRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 209 t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
.... -......+.+. .+|-...+
T Consensus 84 ~~~~-~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 84 ASTL-TTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp HHHH-HHHHHHHTTCS-EEEEECCS
T ss_pred HHHH-HHHHHHHcCCC-eEEEEeCC
Confidence 2212 23445556666 44544444
No 183
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.73 E-value=5e-05 Score=71.91 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=64.7
Q ss_pred EEEEEcCChHHHHHHHHHHhCC--------CCEEEecCCCCCc------------------cc------cccCCCHHHHh
Q 021388 146 TVGIIGLGRIGMAVAKRAEAFS--------CPINYYSRTEKPN------------------LK------YKYYPSVVELA 193 (313)
Q Consensus 146 ~igiiG~G~iG~~iA~~l~~~G--------~~V~~~~~~~~~~------------------~~------~~~~~~l~e~~ 193 (313)
+|+|||.|.+|.++|..|...| .+|..|.|+++.. .+ .....++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 8999999999999999998654 3588887764310 01 12245789999
Q ss_pred hcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCc
Q 021388 194 SNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 194 ~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~ 234 (313)
+.+|+|++++|. ...+.++ ++....++++..+|+++.|=
T Consensus 116 ~~ad~ii~avPs-~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIPH-QFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSCG-GGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECCh-hhhHHHH-HHhccccCCCceeEEecccc
Confidence 999999999993 2333333 55566788999999999883
No 184
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.73 E-value=4.9e-05 Score=69.27 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=71.4
Q ss_pred CCEEEEEcCChHHHH-HHHHHHh-CCCCEE-EecCCCCCcc------ccccCCCHHHHhhcCCEEEEecCCChhhhcccC
Q 021388 144 GKTVGIIGLGRIGMA-VAKRAEA-FSCPIN-YYSRTEKPNL------KYKYYPSVVELASNCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 144 g~~igiiG~G~iG~~-iA~~l~~-~G~~V~-~~~~~~~~~~------~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~ 214 (313)
..+|||||+|.||+. +++.++. -++++. ++|++++... +...+.++++++++.|+|++++|...+...
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~--- 82 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEI--- 82 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHH---
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHH---
Confidence 468999999999996 8888876 467776 7898765321 333477899999999999999995443222
Q ss_pred HHHHhccCCCc-EEEE-cCCCccccHHHHHHHHHhCCee
Q 021388 215 REVIDALGPKG-VLIN-IGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 215 ~~~l~~mk~ga-~lIn-~~rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|. +++. -..-++-+.++|.++.++.++.
T Consensus 83 --~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 83 --IKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp --HHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 223344453 4443 3344556777788888776654
No 185
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.72 E-value=6.2e-05 Score=67.92 Aligned_cols=105 Identities=15% Similarity=0.074 Sum_probs=69.3
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCcccc--------ccCCCHHHHh-hcCCEEEEecCCChhh
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLKY--------KYYPSVVELA-SNCHILVVACPLTEET 209 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~~--------~~~~~l~e~~-~~aDvV~~~lp~~~~t 209 (313)
.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++.... ....+++++. .++|+|+.++|..-..
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~ 195 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTA 195 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGT
T ss_pred CCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCC
Confidence 35789999999999999999999999997 899999987532210 0112334433 7899999999864321
Q ss_pred h-cccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 210 R-HIINREVIDALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 210 ~-~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
. ..+.. +.++++.+++|+.-.+ ..+.-|.+|-+.|
T Consensus 196 ~~~~i~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 231 (272)
T 3pwz_A 196 DLPPLPA---DVLGEAALAYELAYGK-GLTPFLRLAREQG 231 (272)
T ss_dssp CCCCCCG---GGGTTCSEEEESSCSC-CSCHHHHHHHHHS
T ss_pred CCCCCCH---HHhCcCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 1 12333 3467888888886653 3344344444444
No 186
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.70 E-value=3.7e-05 Score=70.44 Aligned_cols=62 Identities=19% Similarity=0.235 Sum_probs=47.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhCC--CCEEEecCCCCCccc---------------ccc-CCCHHHHhhcCCEEEEecCCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFS--CPINYYSRTEKPNLK---------------YKY-YPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G--~~V~~~~~~~~~~~~---------------~~~-~~~l~e~~~~aDvV~~~lp~~ 206 (313)
++|+|||.|.||..+|..|...| .+|..+|++++...+ ... ..++ +.+++||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 58999999999999999998878 689999997642110 111 2456 6788999999999854
Q ss_pred h
Q 021388 207 E 207 (313)
Q Consensus 207 ~ 207 (313)
.
T Consensus 81 ~ 81 (309)
T 1hyh_A 81 K 81 (309)
T ss_dssp G
T ss_pred c
Confidence 3
No 187
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.66 E-value=0.00016 Score=64.40 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=73.1
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCE-EEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhc
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPI-NYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDA 220 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V-~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~ 220 (313)
-..++|+++|+|+||+.+++. . ++++ .+|+ ......+.....+++++++++|+|+=|.+ .+ -+.+.....
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k~gelgv~a~~d~d~lla~pD~VVe~A~-~~----av~e~~~~i 80 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RISKDIPGVVRLDEFQVPSDVSTVVECAS-PE----AVKEYSLQI 80 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SSCCCCSSSEECSSCCCCTTCCEEEECSC-HH----HHHHHHHHH
T ss_pred cccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-ccccccCceeeCCHHHHhhCCCEEEECCC-HH----HHHHHHHHH
Confidence 466899999999999999998 4 8885 5677 22222244445678888889999977664 22 233345677
Q ss_pred cCCCcEEEEcCCCccccH---HHHHHHHHhCCee
Q 021388 221 LGPKGVLINIGRGPHVDE---RELVSALVEGRLG 251 (313)
Q Consensus 221 mk~ga~lIn~~rg~~vd~---~al~~al~~~~l~ 251 (313)
|+.|.-+|-+|-|.+.|. +.|.++.++|+-.
T Consensus 81 L~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~ 114 (253)
T 1j5p_A 81 LKNPVNYIIISTSAFADEVFRERFFSELKNSPAR 114 (253)
T ss_dssp TTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred HHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence 889999999999988887 5677777777644
No 188
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.66 E-value=0.00013 Score=66.66 Aligned_cols=102 Identities=22% Similarity=0.254 Sum_probs=71.0
Q ss_pred CEEEEEcCChHHHH-HHHHHHh-CCCCEE-EecCCCCCcc------ccccCCCHHHHhhcCCEEEEecCCChhhhcccCH
Q 021388 145 KTVGIIGLGRIGMA-VAKRAEA-FSCPIN-YYSRTEKPNL------KYKYYPSVVELASNCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 145 ~~igiiG~G~iG~~-iA~~l~~-~G~~V~-~~~~~~~~~~------~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~ 215 (313)
.+|||||+|.||+. +++.++. -|+++. ++|++++... +...+.+.+++..+.|+|++++|......
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~----- 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFD----- 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHH-----
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHH-----
Confidence 58999999999997 8888875 467765 8898876432 23345678777678999999999554322
Q ss_pred HHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 216 EVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 216 ~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
-....++.|. +++.- ...++-+.++|.++.++.++.
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 1223455665 56652 334556777899988887765
No 189
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.66 E-value=7.8e-05 Score=67.65 Aligned_cols=104 Identities=14% Similarity=0.120 Sum_probs=70.4
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc-------------ccc--CCCHHHHhhcCCEEEEecC
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK-------------YKY--YPSVVELASNCHILVVACP 204 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~-------------~~~--~~~l~e~~~~aDvV~~~lp 204 (313)
.+.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++... ... ..++.+.++++|+|+.++|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 4789999999999999999999999999 59999998653211 011 2377788899999999998
Q ss_pred CChhhh--cccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhC
Q 021388 205 LTEETR--HIINREVIDALGPKGVLINIGRGPHVDERELVSALVEG 248 (313)
Q Consensus 205 ~~~~t~--~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~ 248 (313)
..-... ..+. ...++++.+++|+.=.+ ..+.-|.+|-+.|
T Consensus 204 ~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P-~~T~ll~~A~~~G 245 (283)
T 3jyo_A 204 MGMPAHPGTAFD---VSCLTKDHWVGDVVYMP-IETELLKAARALG 245 (283)
T ss_dssp TTSTTSCSCSSC---GGGCCTTCEEEECCCSS-SSCHHHHHHHHHT
T ss_pred CCCCCCCCCCCC---HHHhCCCCEEEEecCCC-CCCHHHHHHHHCc
Confidence 542111 1222 23466777777776543 2333343444433
No 190
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.65 E-value=7.4e-05 Score=59.82 Aligned_cols=85 Identities=6% Similarity=0.011 Sum_probs=55.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccc----cCCCHHHH----hhcCCEEEEecCCChhh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYK----YYPSVVEL----ASNCHILVVACPLTEET 209 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~----~~~~l~e~----~~~aDvV~~~lp~~~~t 209 (313)
.++++.|+|+|.+|+.+++.|...|++|.++|++++.. .+.. ...+.+.+ +.++|+|++++|..+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 45789999999999999999999999999999876531 1111 11222222 46799999999843332
Q ss_pred hcccCHHHHhccCCCcEEEE
Q 021388 210 RHIINREVIDALGPKGVLIN 229 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn 229 (313)
+.-...+..+....+++-
T Consensus 85 --~~~~~~a~~~~~~~iia~ 102 (141)
T 3llv_A 85 --LKILKALRSVSDVYAIVR 102 (141)
T ss_dssp --HHHHHHHHHHCCCCEEEE
T ss_pred --HHHHHHHHHhCCceEEEE
Confidence 222344555554444443
No 191
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.64 E-value=0.00012 Score=67.84 Aligned_cols=102 Identities=16% Similarity=0.074 Sum_probs=67.5
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCc------cccccCCCHHHHhh--cCCEEEEecCCChhhhcccC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPN------LKYKYYPSVVELAS--NCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~------~~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~ 214 (313)
.+|||||+|.||+.+++.++.. ++++. ++|++++.. .+...+.+++++++ +.|+|++++|...+....
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-- 82 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLI-- 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHH--
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHH--
Confidence 4799999999999999999876 67765 788876532 13345678999998 899999999955433222
Q ss_pred HHHHhccCCC-cEEEEcC-CCccccHHHHHHHHHhCCee
Q 021388 215 REVIDALGPK-GVLINIG-RGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 215 ~~~l~~mk~g-a~lIn~~-rg~~vd~~al~~al~~~~l~ 251 (313)
. ..++.| .+++.-- .-++-+.++|.++.++.++.
T Consensus 83 ~---~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~ 118 (344)
T 3euw_A 83 T---RAVERGIPALCEKPIDLDIEMVRACKEKIGDGASK 118 (344)
T ss_dssp H---HHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGG
T ss_pred H---HHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCe
Confidence 2 223333 3444322 33344556666666665554
No 192
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.63 E-value=0.00012 Score=67.87 Aligned_cols=90 Identities=18% Similarity=0.163 Sum_probs=62.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEEEec--
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILVVAC-- 203 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~~~l-- 203 (313)
.++|+|||.|.+|..+|..|...|+ +|..||++++...+ .....++++.+++||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 3689999999999999999998887 89999998753211 111357887899999999998
Q ss_pred CCChhh------hcc-c------CH---HHHhccCCCcEEEEcCCC
Q 021388 204 PLTEET------RHI-I------NR---EVIDALGPKGVLINIGRG 233 (313)
Q Consensus 204 p~~~~t------~~l-i------~~---~~l~~mk~ga~lIn~~rg 233 (313)
|..+.. +.- + -+ +.+....|.+++++++--
T Consensus 89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP 134 (331)
T 1pzg_A 89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNP 134 (331)
T ss_dssp SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCc
Confidence 644321 110 0 01 122333589999988553
No 193
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.62 E-value=0.0003 Score=66.36 Aligned_cols=175 Identities=14% Similarity=0.207 Sum_probs=112.3
Q ss_pred CcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCC-
Q 021388 90 GVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSC- 168 (313)
Q Consensus 90 gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~- 168 (313)
+|++.|+ +.. -+|=-+++-+++.+| + .+..+...+|.|+|.|..|..+|+.+.++|.
T Consensus 156 ~ipvf~D-Diq--GTa~V~lAall~al~-l------------------~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~ 213 (398)
T 2a9f_A 156 HIPVFHD-DQH--GTAIVVLAAIFNSLK-L------------------LKKSLDEVSIVVNGGGSAGLSITRKLLAAGAT 213 (398)
T ss_dssp SSCEEEH-HHH--HHHHHHHHHHHHHHH-T------------------TTCCTTSCEEEEECCSHHHHHHHHHHHHHTCC
T ss_pred Ccceecc-hhh--hHHHHHHHHHHHHHH-H------------------hCCCCCccEEEEECCCHHHHHHHHHHHHcCCC
Confidence 5899994 332 344455666666655 1 2446888999999999999999999999999
Q ss_pred CEEEecCCC-------CCcccc-----------ccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEc
Q 021388 169 PINYYSRTE-------KPNLKY-----------KYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINI 230 (313)
Q Consensus 169 ~V~~~~~~~-------~~~~~~-----------~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~ 230 (313)
+|+.+|+.. ...... ....+|+|+++.+|+++-+- +.+++.++.++.|+++++++.+
T Consensus 214 ~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk~Ma~~pIIfal 288 (398)
T 2a9f_A 214 KVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS-----APGVLKAEWISKMAARPVIFAM 288 (398)
T ss_dssp EEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHHTSCSSCEEEEC
T ss_pred eEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC-----CCCCCCHHHHHhhCCCCEEEEC
Confidence 899999863 111110 11346899999999987652 3578999999999999999999
Q ss_pred CCCcc-ccHHHHHHHHHhCC-eeEEEecCCCCCCCCCCcccCCCceEEccCCCCCcHHHH-----HHHHHHHHHHHHHHH
Q 021388 231 GRGPH-VDERELVSALVEGR-LGGAGLDVFENEPHVPEELFGLENVVLMPHVGSGTVETR-----KTMADLVLGNLEAHF 303 (313)
Q Consensus 231 ~rg~~-vd~~al~~al~~~~-l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a~~t~~~~-----~~~~~~~~~nl~~~~ 303 (313)
|+... +..++..+ .|+ +.+-+ -. +.-=|..|+++-|=++-..-.+. +.|.-.+++-|.++.
T Consensus 289 sNPt~E~~pe~a~~---~g~~i~atG---rs------~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d~m~~aAa~alA~~~ 356 (398)
T 2a9f_A 289 ANPIPEIYPDEALE---AGAYIVGTG---RS------DFPNQINNVLAFPGIFRGALDARAKTITVEMQIAAAKGIASLV 356 (398)
T ss_dssp CSSSCSSCHHHHHT---TTCSEEEES---CT------TSSSBCCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTC
T ss_pred CCCCccCCHHHHHH---hCCeEEEeC---CC------CCCCcCCceeEcchHHHHHHHcCCcCCCHHHHHHHHHHHHhcC
Confidence 98654 23333333 355 33222 11 11235667766665443222222 444444555555544
No 194
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.60 E-value=0.00029 Score=62.41 Aligned_cols=81 Identities=19% Similarity=0.219 Sum_probs=57.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEE-EecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGP 223 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ 223 (313)
.+|+|+|+|+||+.+++.+...+.++. ++|+......+.....++++++ ++|+|+-..+ ...+. +.+. ++.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~DVvIDft~-p~a~~-----~~~~-l~~ 75 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GADVAIDFSN-PNLLF-----PLLD-EDF 75 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCSEEEECSC-HHHHH-----HHHT-SCC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCCEEEEeCC-hHHHH-----HHHH-Hhc
Confidence 589999999999999999987765654 5788776555666677888888 9999874442 12222 2334 777
Q ss_pred CcEEEEcCCC
Q 021388 224 KGVLINIGRG 233 (313)
Q Consensus 224 ga~lIn~~rg 233 (313)
|.-+|....|
T Consensus 76 g~~vVigTTG 85 (243)
T 3qy9_A 76 HLPLVVATTG 85 (243)
T ss_dssp CCCEEECCCS
T ss_pred CCceEeCCCC
Confidence 7777766666
No 195
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.59 E-value=0.00025 Score=68.12 Aligned_cols=105 Identities=16% Similarity=0.219 Sum_probs=77.5
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC---CEEEec----CC----CCCc---c-cc-----c------cCCCHHHHh
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC---PINYYS----RT----EKPN---L-KY-----K------YYPSVVELA 193 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~---~V~~~~----~~----~~~~---~-~~-----~------~~~~l~e~~ 193 (313)
..+.++++.|+|.|..|+++++.|...|. +|+++| |+ .... . .. . ...++.+.+
T Consensus 182 ~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l 261 (439)
T 2dvm_A 182 KKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEAL 261 (439)
T ss_dssp CCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHH
T ss_pred CCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHh
Confidence 45788999999999999999999999998 799999 76 2211 1 00 0 134688889
Q ss_pred hcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCC
Q 021388 194 SNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGR 249 (313)
Q Consensus 194 ~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~ 249 (313)
+++|+++.+.|..+ +++.++.++.|++++++++++.. ..+.-+.+|.+.|.
T Consensus 262 ~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP--~~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 262 KDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANP--VPEILPEEAKKAGA 312 (439)
T ss_dssp TTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSS--SCSSCHHHHHHHTC
T ss_pred ccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCC--CCcchHHHHHHcCC
Confidence 99999999988532 34556678889999999999543 34555555555554
No 196
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.58 E-value=0.00016 Score=66.48 Aligned_cols=101 Identities=11% Similarity=0.128 Sum_probs=68.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCc------cccccCCCHHHHhh--cCCEEEEecCCChhhhcccC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPN------LKYKYYPSVVELAS--NCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~------~~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~ 214 (313)
.+|||||+|.||+..++.+... ++++. ++|++++.. .+.. +.+++++++ +.|+|++++|...+...
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~--- 79 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADL--- 79 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHH---
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHH---
Confidence 4899999999999999999875 77866 688876532 1334 678999998 79999999995443322
Q ss_pred HHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 215 REVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 215 ~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|. +++.- ..-++-+.++|.++.++.++.
T Consensus 80 --~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (331)
T 4hkt_A 80 --IERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAK 116 (331)
T ss_dssp --HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCe
Confidence 122333443 33332 233445566677777766654
No 197
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.58 E-value=7.9e-05 Score=68.63 Aligned_cols=107 Identities=17% Similarity=0.254 Sum_probs=66.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc--------------cc-cCCCHHHHhhcCCEEEEecCCCh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK--------------YK-YYPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~--------------~~-~~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
++|+|||.|.||..+|..|...|+ +|..+|++++...+ .. ...+ .+.+++||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 479999999999999999998888 89999987642111 00 1124 356789999999998543
Q ss_pred hh---h--------cccCHHHHhc---cCCCcEEEEcCCCccccHHHHHHHH--HhCCeeEE
Q 021388 208 ET---R--------HIINREVIDA---LGPKGVLINIGRGPHVDERELVSAL--VEGRLGGA 253 (313)
Q Consensus 208 ~t---~--------~li~~~~l~~---mk~ga~lIn~~rg~~vd~~al~~al--~~~~l~ga 253 (313)
.. + .++ .+.+.. ..|++++|+++.+.-+-...+.+.. ...++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVM-KEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp CSSCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 10 0 011 222222 2578899888655433223332322 34466554
No 198
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.55 E-value=0.00013 Score=67.91 Aligned_cols=101 Identities=16% Similarity=0.190 Sum_probs=66.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCcc------ccccCCCHHHHh--hcCCEEEEecCCChhhhcccC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPNL------KYKYYPSVVELA--SNCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~~------~~~~~~~l~e~~--~~aDvV~~~lp~~~~t~~li~ 214 (313)
.+|||||+|.||+..++.++.. |+++. ++|++++... +...+.++++++ .+.|+|++++|...+....
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-- 83 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVI-- 83 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHH--
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHH--
Confidence 4899999999999999999877 78855 7888765321 334577899999 5699999999965443322
Q ss_pred HHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCe
Q 021388 215 REVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 215 ~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l 250 (313)
...++.|. +++.-- .-++-+.++|.++.++.++
T Consensus 84 ---~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~ 118 (354)
T 3db2_A 84 ---EQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGV 118 (354)
T ss_dssp ---HHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCC
T ss_pred ---HHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCC
Confidence 22333443 343322 2334455556666555443
No 199
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.55 E-value=9.3e-05 Score=68.80 Aligned_cols=103 Identities=13% Similarity=0.093 Sum_probs=66.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHhC--CCCEE-EecCCCCCcc------ccccCCCHHHHhh--cCCEEEEecCCChhhhcc
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAF--SCPIN-YYSRTEKPNL------KYKYYPSVVELAS--NCHILVVACPLTEETRHI 212 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~--G~~V~-~~~~~~~~~~------~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~l 212 (313)
-.+|||||+|.||+..++.++.. ++++. ++|++++... +...+.+++++++ +.|+|++++|...+...
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~- 91 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQ- 91 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHHHH-
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHHHH-
Confidence 35899999999999999999876 77755 7888765321 3345679999987 79999999995433221
Q ss_pred cCHHHHhccCCCcEEEE-c-CCCccccHHHHHHHHHhCCee
Q 021388 213 INREVIDALGPKGVLIN-I-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 213 i~~~~l~~mk~ga~lIn-~-~rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|.-++. - --.++-+.++|.++.++.++.
T Consensus 92 ----~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~ 128 (354)
T 3q2i_A 92 ----SIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKH 128 (354)
T ss_dssp ----HHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred ----HHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCe
Confidence 2223334433332 1 123344555566666554443
No 200
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.54 E-value=0.00018 Score=66.18 Aligned_cols=93 Identities=16% Similarity=0.200 Sum_probs=63.6
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCC---CCcc----------c--c--ccCCC---HHHHhhcCCE
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTE---KPNL----------K--Y--KYYPS---VVELASNCHI 198 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~---~~~~----------~--~--~~~~~---l~e~~~~aDv 198 (313)
.++.|+++.|+|.|.+|++++..|...|+ +|.+++|+. ++.. + . ....+ +.+.+.++|+
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi 229 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI 229 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred CCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence 35889999999999999999999999999 799999983 2211 0 0 11122 4566789999
Q ss_pred EEEecCCChhh--h-cccCHHHHhccCCCcEEEEcCCCc
Q 021388 199 LVVACPLTEET--R-HIINREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 199 V~~~lp~~~~t--~-~li~~~~l~~mk~ga~lIn~~rg~ 234 (313)
|+.++|..-.. . ..+. ....++++.+++|+.=.+
T Consensus 230 IINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 230 FTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP 266 (315)
T ss_dssp EEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS
T ss_pred EEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC
Confidence 99999854211 1 1121 223467788888876544
No 201
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.53 E-value=0.00028 Score=64.72 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=66.2
Q ss_pred EEEEEcCChHHHHHHHHHHhC-CCCE-EEecCCCCCcc------cc-ccCCCHHHHh-hcCCEEEEecCCChhhhcccCH
Q 021388 146 TVGIIGLGRIGMAVAKRAEAF-SCPI-NYYSRTEKPNL------KY-KYYPSVVELA-SNCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 146 ~igiiG~G~iG~~iA~~l~~~-G~~V-~~~~~~~~~~~------~~-~~~~~l~e~~-~~aDvV~~~lp~~~~t~~li~~ 215 (313)
+|||||+|.||+.+++.++.. ++++ .++|++++... +. ..+.++++++ .+.|+|++++|...+.. +
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~--~-- 78 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFA--Q-- 78 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHH--H--
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHH--H--
Confidence 799999999999999999876 5665 47888764321 21 3457899998 78999999999443222 1
Q ss_pred HHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 216 EVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 216 ~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|. +++.- ..-++-+.++|.++.++.++.
T Consensus 79 -~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 115 (325)
T 2ho3_A 79 -AKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCF 115 (325)
T ss_dssp -HHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 223344454 45542 223444556677777666554
No 202
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.52 E-value=0.00017 Score=66.13 Aligned_cols=60 Identities=17% Similarity=0.246 Sum_probs=46.7
Q ss_pred CEEEEEcCChHHHHHHHHHHh--CCCCEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEEEecCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEA--FSCPINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~--~G~~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
++|+|||.|.+|..+|..|.. +|.+|..+|++++...+ .....+.++ +++||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 479999999999999999986 57899999998752111 011245666 8999999999974
No 203
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.52 E-value=5e-05 Score=69.50 Aligned_cols=102 Identities=13% Similarity=0.140 Sum_probs=69.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCE-EEecCCCCCccc----cccCCCHHHHhh--cCCEEEEecCCChhhhcccCHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPI-NYYSRTEKPNLK----YKYYPSVVELAS--NCHILVVACPLTEETRHIINRE 216 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V-~~~~~~~~~~~~----~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~~~ 216 (313)
.+|||||+|.||+.+++.+... ++++ .++|++++.... ...+.+++++++ ++|+|++++|...+.. -
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-----~ 85 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAE-----I 85 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHH-----H
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHH-----H
Confidence 4899999999999999999875 5664 488887643211 234568899885 7999999999443322 1
Q ss_pred HHhccCCCc-EEEE-cCCCccccHHHHHHHHHhCCee
Q 021388 217 VIDALGPKG-VLIN-IGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 217 ~l~~mk~ga-~lIn-~~rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|. +++. ...-++-+.++|.++.++.++.
T Consensus 86 ~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 86 TLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp HHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 223455664 5555 2233455667788888776654
No 204
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.51 E-value=0.00016 Score=66.71 Aligned_cols=102 Identities=17% Similarity=0.065 Sum_probs=67.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCcc------cc-ccCCCHHHHhh--cCCEEEEecCCChhhhccc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPNL------KY-KYYPSVVELAS--NCHILVVACPLTEETRHII 213 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~~------~~-~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li 213 (313)
.+|||||+|.||+.+++.++.. ++++. ++|++++... +. ..+.++++++. +.|+|++++|...+....
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~- 84 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAA- 84 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHH-
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHH-
Confidence 5899999999999999999875 67765 6788765321 23 35678999987 799999999955432221
Q ss_pred CHHHHhccCCC-cEEEEcC-CCccccHHHHHHHHHhCCee
Q 021388 214 NREVIDALGPK-GVLINIG-RGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 214 ~~~~l~~mk~g-a~lIn~~-rg~~vd~~al~~al~~~~l~ 251 (313)
...++.| .+++.-- .-++-+.++|.++.++.++.
T Consensus 85 ----~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~ 120 (330)
T 3e9m_A 85 ----KLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVF 120 (330)
T ss_dssp ----HHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCC
T ss_pred ----HHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 2223334 2444322 33445556666666666554
No 205
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.51 E-value=0.00023 Score=64.66 Aligned_cols=104 Identities=22% Similarity=0.247 Sum_probs=69.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHhCCCCEE-EecCCCC--CccccccCCCHHHHhh--cCCEEEEecCCChhhhcccCHHH
Q 021388 144 GKTVGIIGL-GRIGMAVAKRAEAFSCPIN-YYSRTEK--PNLKYKYYPSVVELAS--NCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 144 g~~igiiG~-G~iG~~iA~~l~~~G~~V~-~~~~~~~--~~~~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
..+|+|+|+ |++|+..++.++..|+++. ..|+... ...+...+.+++++.. ..|++++++|... ....+ .+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~-~~~~~-~ea 84 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPF-CKDSI-LEA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGG-HHHHH-HHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHH-HHHHH-HHH
Confidence 468999999 9999999999998899843 5666532 2234455778999988 8999999999432 22222 333
Q ss_pred HhccCCCcEEEEcCCCc-cccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRGP-HVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg~-~vd~~al~~al~~~~l~ 251 (313)
++. .. ..+|..+.|- .-+.+.+.++.++..+.
T Consensus 85 ~~~-Gi-~~iVi~t~G~~~~~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 85 IDA-GI-KLIITITEGIPTLDMLTVKVKLDEAGVR 117 (288)
T ss_dssp HHT-TC-SEEEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHC-CC-CEEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 322 22 2334454442 34456888888887765
No 206
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.50 E-value=0.00017 Score=66.14 Aligned_cols=101 Identities=21% Similarity=0.151 Sum_probs=67.0
Q ss_pred EEEEEcCChHHHHH-HHHHHhCCCCEE-EecCCCCCcc------cc-ccCCCHHHHhh--cCCEEEEecCCChhhhcccC
Q 021388 146 TVGIIGLGRIGMAV-AKRAEAFSCPIN-YYSRTEKPNL------KY-KYYPSVVELAS--NCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 146 ~igiiG~G~iG~~i-A~~l~~~G~~V~-~~~~~~~~~~------~~-~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~ 214 (313)
+|||||+|.||+.+ ++.++..|+++. ++|++++... +. ..+.+++++++ ++|+|++++|...+..
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~---- 77 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHRE---- 77 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHH----
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHH----
Confidence 79999999999998 777766778865 7888765321 22 24678999987 4999999999433221
Q ss_pred HHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 215 REVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 215 ~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
-....++.|. +++.- ...+.-+.++|.++.++.++.
T Consensus 78 -~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 78 -QTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVV 115 (332)
T ss_dssp -HHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCE
Confidence 2223455665 44442 233445566777777766554
No 207
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.50 E-value=0.00028 Score=63.97 Aligned_cols=104 Identities=12% Similarity=0.181 Sum_probs=69.3
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc----c--ccCCCHHHHhhcCCEEEEecCCC--hhhh-
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK----Y--KYYPSVVELASNCHILVVACPLT--EETR- 210 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~----~--~~~~~l~e~~~~aDvV~~~lp~~--~~t~- 210 (313)
.+.|+++.|+|.|.+|++++..|...|+ +|.+++|+.++... . ....++.+ + ++|+|+.++|.. +...
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~ 196 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGE 196 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTC
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCcc
Confidence 4789999999999999999999999999 79999998754221 1 11122333 4 899999999863 2211
Q ss_pred cccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 211 HIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
-.+..+. ++++.+++|+.=.+. .+ .|+++.++..+.
T Consensus 197 ~pi~~~~---l~~~~~v~DlvY~P~-~T-~ll~~A~~~G~~ 232 (282)
T 3fbt_A 197 SPVDKEV---VAKFSSAVDLIYNPV-ET-LFLKYARESGVK 232 (282)
T ss_dssp CSSCHHH---HTTCSEEEESCCSSS-SC-HHHHHHHHTTCE
T ss_pred CCCCHHH---cCCCCEEEEEeeCCC-CC-HHHHHHHHCcCe
Confidence 1244443 568889999875442 33 344444444444
No 208
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.49 E-value=4.1e-05 Score=69.39 Aligned_cols=106 Identities=17% Similarity=0.137 Sum_probs=70.5
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccccc---------------cCCCHHHHhhcCCEEEEecCC
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYK---------------YYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~---------------~~~~l~e~~~~aDvV~~~lp~ 205 (313)
++.|+++.|+|.|.||+++|+.|...| +|.+++|+.++..... ...++.+.+.++|+|+.++|.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 478899999999999999999999999 9999999764321100 011224556789999999985
Q ss_pred Chhhh--c-ccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 206 TEETR--H-IINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 206 ~~~t~--~-li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
..... . .+. ..+.++++.+++|+.-.. ..+ .+.+..++....
T Consensus 204 ~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p-~~t-~ll~~a~~~G~~ 248 (287)
T 1nvt_A 204 GMYPNIDVEPIV--KAEKLREDMVVMDLIYNP-LET-VLLKEAKKVNAK 248 (287)
T ss_dssp TCTTCCSSCCSS--CSTTCCSSSEEEECCCSS-SSC-HHHHHHHTTTCE
T ss_pred CCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC-ccC-HHHHHHHHCCCE
Confidence 43211 0 120 134678899999998753 233 355555554443
No 209
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.48 E-value=0.00014 Score=67.65 Aligned_cols=105 Identities=18% Similarity=0.079 Sum_probs=66.3
Q ss_pred cCCCEEEEEcCChHHH-HHHHHHHhC-CCCEE-EecCCCCCcc------ccccCCCHHHHhh--cCCEEEEecCCChhhh
Q 021388 142 FTGKTVGIIGLGRIGM-AVAKRAEAF-SCPIN-YYSRTEKPNL------KYKYYPSVVELAS--NCHILVVACPLTEETR 210 (313)
Q Consensus 142 l~g~~igiiG~G~iG~-~iA~~l~~~-G~~V~-~~~~~~~~~~------~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~ 210 (313)
....+|||||+|.||+ .+++.++.. +++|. ++|++++... +...+.+++++++ +.|+|++++|...+..
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 104 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAE 104 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHH
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 3446899999999998 789988876 77765 7788765321 3334578999986 5899999999544322
Q ss_pred cccCHHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCee
Q 021388 211 HIINREVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 211 ~li~~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l~ 251 (313)
. ....++.|. +++.-- -.++-+.++|.++.++.++.
T Consensus 105 ~-----~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~ 142 (350)
T 3rc1_A 105 W-----IDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLL 142 (350)
T ss_dssp H-----HHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred H-----HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 1 122233443 333321 23445556666666555543
No 210
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.48 E-value=0.00031 Score=57.08 Aligned_cols=87 Identities=3% Similarity=-0.034 Sum_probs=57.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCC---------cccccc----CC---CHHHH-hhcCCEEEEecCCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKP---------NLKYKY----YP---SVVEL-ASNCHILVVACPLT 206 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~---------~~~~~~----~~---~l~e~-~~~aDvV~~~lp~~ 206 (313)
++++.|+|+|.+|+.+++.|...|++|.+.|+++.. ..+... .. .+.+. +.++|+|+++++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 467999999999999999999999999999987410 111111 11 23444 78899999999865
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 207 EETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
+.+. .-......+.+...+|...+
T Consensus 83 ~~n~--~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 83 ADNA--FVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp HHHH--HHHHHHHHHTSSSCEEEECS
T ss_pred HHHH--HHHHHHHHHCCCCEEEEEEC
Confidence 4333 22445556644444444333
No 211
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.47 E-value=0.00021 Score=66.11 Aligned_cols=60 Identities=18% Similarity=0.213 Sum_probs=47.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEEEecC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~~~lp 204 (313)
.++|+|||.|.||..+|..+...|+ +|..||++++...+ .....++ +.+++||+|+++++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 3699999999999999999998898 89999998753221 1112456 67899999999983
No 212
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.47 E-value=0.00026 Score=65.13 Aligned_cols=101 Identities=14% Similarity=0.142 Sum_probs=67.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCE-EEecCCCCCcc--ccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPI-NYYSRTEKPNL--KYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDA 220 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V-~~~~~~~~~~~--~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~ 220 (313)
.+|||||+|+||+.+++.+... ++++ .++|+++.... +...+.++++++.++|+|++++|...+. +.....
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~~~a 78 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTKTPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQAPK 78 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSSSCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhcCCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHHHHH
Confidence 4799999999999999999876 5664 57787744321 2223457778778899999999854322 334455
Q ss_pred cCCCcEEEEcCCCcc--ccH-HHHHHHHHhCCe
Q 021388 221 LGPKGVLINIGRGPH--VDE-RELVSALVEGRL 250 (313)
Q Consensus 221 mk~ga~lIn~~rg~~--vd~-~al~~al~~~~l 250 (313)
++.|.-+|...-..+ -+. +.|.++.+++..
T Consensus 79 l~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~ 111 (320)
T 1f06_A 79 FAQFACTVDTYDNHRDIPRHRQVMNEAATAAGN 111 (320)
T ss_dssp HTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTC
T ss_pred HHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCC
Confidence 677877666554432 233 567777776553
No 213
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.45 E-value=0.00019 Score=67.03 Aligned_cols=64 Identities=17% Similarity=0.244 Sum_probs=50.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCc-----cccccCCCHHHHhh--cCCEEEEecCCChh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPN-----LKYKYYPSVVELAS--NCHILVVACPLTEE 208 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~-----~~~~~~~~l~e~~~--~aDvV~~~lp~~~~ 208 (313)
.+|||||+|.||+..++.++.. ++++. ++|++++.. .+...+.+++++++ +.|+|++++|...+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h 78 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSH 78 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 5899999999999999999876 67765 678876532 23445789999987 78999999995433
No 214
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.44 E-value=0.00031 Score=64.57 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=66.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCcc------ccc-cCCCHHHHhh--cCCEEEEecCCChhhhccc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPNL------KYK-YYPSVVELAS--NCHILVVACPLTEETRHII 213 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~~------~~~-~~~~l~e~~~--~aDvV~~~lp~~~~t~~li 213 (313)
.++||||+|.||+.+++.++.. ++++. ++|++++... +.. .+.++++++. +.|+|++++|...+...
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~-- 83 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKV-- 83 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHH--
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHH--
Confidence 5899999999999999998765 45654 6788766432 222 4678999998 79999999995433221
Q ss_pred CHHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCee
Q 021388 214 NREVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 214 ~~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|. +++.-- --++-+.++|.++.++.++.
T Consensus 84 ---~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~ 120 (329)
T 3evn_A 84 ---AKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLF 120 (329)
T ss_dssp ---HHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCC
T ss_pred ---HHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCE
Confidence 223344443 333321 33445566677777666654
No 215
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.43 E-value=0.00041 Score=54.87 Aligned_cols=99 Identities=18% Similarity=0.199 Sum_probs=74.3
Q ss_pred CEEEEEcC----ChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhc
Q 021388 145 KTVGIIGL----GRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDA 220 (313)
Q Consensus 145 ~~igiiG~----G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~ 220 (313)
++|+|||. |..|..+.+.|+..|++|+-.++......|...+.++.++-. -|++++++|. +.+..++ ++.. .
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v-~e~~-~ 80 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEG-VDTVTLYINP-QNQLSEY-NYIL-S 80 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTT-CCEEEECSCH-HHHGGGH-HHHH-H
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCC-CCEEEEEeCH-HHHHHHH-HHHH-h
Confidence 57999998 568999999999999999999998776667666778888877 9999999983 3344444 3333 3
Q ss_pred cCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 221 LGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 221 mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+...+++++.|- .++++.+.+++..++
T Consensus 81 ~g~k~v~~~~G~----~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 81 LKPKRVIFNPGT----ENEELEEILSENGIE 107 (122)
T ss_dssp HCCSEEEECTTC----CCHHHHHHHHHTTCE
T ss_pred cCCCEEEECCCC----ChHHHHHHHHHcCCe
Confidence 444567766543 357788888888777
No 216
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.40 E-value=0.00026 Score=65.46 Aligned_cols=101 Identities=21% Similarity=0.243 Sum_probs=66.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCcc------cc-ccCCCHHHHhh--cCCEEEEecCCChhhhccc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPNL------KY-KYYPSVVELAS--NCHILVVACPLTEETRHII 213 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~~------~~-~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li 213 (313)
.+|||||+|.||+..++.++.. ++++. ++|++++... +. ..+.+++++++ +.|+|++++|...+...
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~-- 80 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSEL-- 80 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHH--
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHH--
Confidence 4799999999999999999875 67765 6888765321 22 24678999998 79999999995433221
Q ss_pred CHHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCe
Q 021388 214 NREVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 214 ~~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l 250 (313)
....++.|. +++.-- .-++-+.++|.++.++.++
T Consensus 81 ---~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~ 116 (344)
T 3ezy_A 81 ---VIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADV 116 (344)
T ss_dssp ---HHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 222334443 444422 3344555666666665544
No 217
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.39 E-value=0.00016 Score=66.12 Aligned_cols=101 Identities=16% Similarity=0.112 Sum_probs=63.9
Q ss_pred CEEEEEcCChHHHHHHHHHHh-CCCCEE-EecCCCCCcc--ccc--cCCCHHHHhhcCCEEEEecCCChhhhcccCHHHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEA-FSCPIN-YYSRTEKPNL--KYK--YYPSVVELASNCHILVVACPLTEETRHIINREVI 218 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~-~G~~V~-~~~~~~~~~~--~~~--~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l 218 (313)
.+|||||+|+||+.+++.++. -++++. ++|++++... +.. ...++.+. .++|+|++|+|...+. +...
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h~-----~~~~ 83 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQL-ESVDVALVCSPSREVE-----RTAL 83 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGS-SSCCEEEECSCHHHHH-----HHHH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhC-CCCCEEEECCCchhhH-----HHHH
Confidence 589999999999999999986 467776 6888765322 221 13445554 6899999999843322 2233
Q ss_pred hccCCCcEEEEcCC--C-ccccHHHHHHHHHhCCee
Q 021388 219 DALGPKGVLINIGR--G-PHVDERELVSALVEGRLG 251 (313)
Q Consensus 219 ~~mk~ga~lIn~~r--g-~~vd~~al~~al~~~~l~ 251 (313)
..++.|.-+++..- + ...+.+.|.++.++..+.
T Consensus 84 ~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~ 119 (304)
T 3bio_A 84 EILKKGICTADSFDIHDGILALRRSLGDAAGKSGAA 119 (304)
T ss_dssp HHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCE
T ss_pred HHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCE
Confidence 45667877776532 2 334556777777776543
No 218
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.39 E-value=0.00025 Score=65.44 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=68.3
Q ss_pred CEEEEEcCChHHHHHHHHHH-h-CCCCE-EEecCCCCCc------ccc-ccCCCHHHHhh--cCCEEEEecCCChhhhcc
Q 021388 145 KTVGIIGLGRIGMAVAKRAE-A-FSCPI-NYYSRTEKPN------LKY-KYYPSVVELAS--NCHILVVACPLTEETRHI 212 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~-~-~G~~V-~~~~~~~~~~------~~~-~~~~~l~e~~~--~aDvV~~~lp~~~~t~~l 212 (313)
.+|||||+|.||+..++.++ . -|+++ .++|++++.. .+. ..+.+++++++ ++|+|++++|...+..
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~-- 86 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPE-- 86 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHH--
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHH--
Confidence 58999999999999999988 5 47775 5788876532 123 34578999986 6999999999443322
Q ss_pred cCHHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhC-Cee
Q 021388 213 INREVIDALGPKG-VLINI-GRGPHVDERELVSALVEG-RLG 251 (313)
Q Consensus 213 i~~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~-~l~ 251 (313)
.....++.|. +++.- ...++-+.++|.++.++. ++.
T Consensus 87 ---~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 87 ---MTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp ---HHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred ---HHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 2334455665 44431 123344556688888877 665
No 219
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.39 E-value=0.00038 Score=64.22 Aligned_cols=58 Identities=10% Similarity=0.124 Sum_probs=46.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEEEec
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILVVAC 203 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~~~l 203 (313)
++|+|||.|.||..+|..+...|+ +|..+|++++...+ .....+. +.+++||+|++++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence 589999999999999999998888 89999987753211 1112456 7789999999998
No 220
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.37 E-value=0.00016 Score=66.20 Aligned_cols=108 Identities=13% Similarity=0.143 Sum_probs=67.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc--------c------cc-CCCHHHHhhcCCEEEEecCCCh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK--------Y------KY-YPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~--------~------~~-~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
++|+|||.|.+|..+|..+...|+ +|..+|++++...+ . .. ..+ .+.+++||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 489999999999999999998898 89999987642111 0 00 123 356889999999995332
Q ss_pred h-----------hhcccC--HHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEE
Q 021388 208 E-----------TRHIIN--REVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGA 253 (313)
Q Consensus 208 ~-----------t~~li~--~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga 253 (313)
. +..++. .+.+....|++++++++.+.-+....+.+.....++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 1 111110 122333368999999766544444445555455566554
No 221
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.35 E-value=0.00047 Score=70.48 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=77.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc--------------------cc-------ccCCCHHHHhhcCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL--------------------KY-------KYYPSVVELASNCH 197 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------------------~~-------~~~~~l~e~~~~aD 197 (313)
++|||||.|.||+.+|..+...|++|..+|++++... .. ....+. +.+++||
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~aD 395 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTVD 395 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCG-GGGGSCS
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcH-HHHhhCC
Confidence 6999999999999999999999999999998764210 00 011233 3478999
Q ss_pred EEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCC
Q 021388 198 ILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFE 259 (313)
Q Consensus 198 vV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~ 259 (313)
+|+=++|.+.+.+.-+-+++=+.++++++|-....+ +....|.++++ ..-+.+++=-|.
T Consensus 396 lVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfn 454 (742)
T 3zwc_A 396 LVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFS 454 (742)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCS
T ss_pred EEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccC
Confidence 999999988888876667777789999998543333 34455655543 233334555453
No 222
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.35 E-value=0.00047 Score=63.45 Aligned_cols=102 Identities=8% Similarity=0.075 Sum_probs=69.0
Q ss_pred CEEEEEcCChHHH-HHHHHHHhCCCCE-EEecCCCCCcc-------ccccCCCHHHHhh--cCCEEEEecCCChhhhccc
Q 021388 145 KTVGIIGLGRIGM-AVAKRAEAFSCPI-NYYSRTEKPNL-------KYKYYPSVVELAS--NCHILVVACPLTEETRHII 213 (313)
Q Consensus 145 ~~igiiG~G~iG~-~iA~~l~~~G~~V-~~~~~~~~~~~-------~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li 213 (313)
.+|||||+|.+|. .+++.++..|+++ .++|++++... +...+.+++++++ +.|+|++++|...+..
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~--- 81 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAE--- 81 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHH---
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHH---
Confidence 5899999999996 6777777678885 58898876432 2345678999987 6899999999543322
Q ss_pred CHHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 214 NREVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 214 ~~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
-....++.|. +++.- ..-++-+.++|.++.++.++.
T Consensus 82 --~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~ 119 (336)
T 2p2s_A 82 --LALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRK 119 (336)
T ss_dssp --HHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCC
T ss_pred --HHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCE
Confidence 2233455564 55552 233445666777777666554
No 223
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.35 E-value=0.00013 Score=66.61 Aligned_cols=101 Identities=18% Similarity=0.296 Sum_probs=63.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccC---------CCH-HHHhhcCCEEEEecCCChhh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYY---------PSV-VELASNCHILVVACPLTEET 209 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~---------~~l-~e~~~~aDvV~~~lp~~~~t 209 (313)
++|+|||.|.||..+|..|. .|.+|.+++|++... .+.... .+. .+....+|+|+++++.. ++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 68999999999999999999 899999999976421 111100 000 23567899999999843 23
Q ss_pred hcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 210 RHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
..++ +.++.+.+++ +|.+.-|=- .++.+.+.+...++.
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcEE
Confidence 3332 2233345566 888777632 223444444444443
No 224
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.32 E-value=0.00074 Score=60.74 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=66.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc------cccCCCHHHHhhcCCEEEEecCCChhhh----c
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK------YKYYPSVVELASNCHILVVACPLTEETR----H 211 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~------~~~~~~l~e~~~~aDvV~~~lp~~~~t~----~ 211 (313)
.++++.|+|.|.+|++++..|...|+ +|.+++|+.++... .....++. +.++|+|+.++|...... .
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 46789999999999999999999998 79999998653211 11111222 468999999999653211 1
Q ss_pred -ccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 212 -IINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 212 -li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
.+..+. ++++.+++|+.-.+. .+ .|.++.++.+..
T Consensus 196 ~~~~~~~---l~~~~~v~DlvY~P~-~T-~ll~~A~~~G~~ 231 (271)
T 1npy_A 196 LAFPKAF---IDNASVAFDVVAMPV-ET-PFIRYAQARGKQ 231 (271)
T ss_dssp CSSCHHH---HHHCSEEEECCCSSS-SC-HHHHHHHHTTCE
T ss_pred CCCCHHH---cCCCCEEEEeecCCC-CC-HHHHHHHHCCCE
Confidence 133233 456778888876443 33 455555554444
No 225
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.32 E-value=0.00037 Score=63.88 Aligned_cols=102 Identities=10% Similarity=0.037 Sum_probs=66.4
Q ss_pred CEEEEEcCChHHH-HHHHHHHhC-CCCEEEecCCCCCcc------cccc-CCCHHHHh-hcCCEEEEecCCChhhhcccC
Q 021388 145 KTVGIIGLGRIGM-AVAKRAEAF-SCPINYYSRTEKPNL------KYKY-YPSVVELA-SNCHILVVACPLTEETRHIIN 214 (313)
Q Consensus 145 ~~igiiG~G~iG~-~iA~~l~~~-G~~V~~~~~~~~~~~------~~~~-~~~l~e~~-~~aDvV~~~lp~~~~t~~li~ 214 (313)
.+|||||+|.||+ .+++.++.. ++++.++|++++... +... ..+..+++ .++|+|++++|......
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~---- 78 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHST---- 78 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHH----
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHH----
Confidence 3799999999998 489988765 678779998765321 2222 33444555 78999999999432221
Q ss_pred HHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 215 REVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 215 ~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
-....++.|. +++.- .--++-+.++|.++.++.++.
T Consensus 79 -~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 79 -LAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp -HHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 1223455564 56652 233445667788888887765
No 226
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.29 E-value=0.00099 Score=61.16 Aligned_cols=91 Identities=16% Similarity=0.249 Sum_probs=61.8
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCC---Ccc----------cc----ccCCCH---HHHhhcCCEE
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEK---PNL----------KY----KYYPSV---VELASNCHIL 199 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~---~~~----------~~----~~~~~l---~e~~~~aDvV 199 (313)
.+.|+++.|+|.|.+|++++..|...|+ +|.+++|+.+ +.. +. ....++ .+.+.++|+|
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 4789999999999999999999999999 6999999833 111 00 012343 5567889999
Q ss_pred EEecCCCh--hhhccc--CHHHHhccCCCcEEEEcCCCc
Q 021388 200 VVACPLTE--ETRHII--NREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 200 ~~~lp~~~--~t~~li--~~~~l~~mk~ga~lIn~~rg~ 234 (313)
+.++|..- .....+ +. ..++++.++.|+.=.+
T Consensus 225 INaTp~Gm~~~~~~~~~~~~---~~l~~~~~v~D~vY~P 260 (312)
T 3t4e_A 225 TNGTKVGMKPLENESLIGDV---SLLRPELLVTECVYNP 260 (312)
T ss_dssp EECSSTTSTTSTTCCSCCCG---GGSCTTCEEEECCCSS
T ss_pred EECCcCCCCCCCCCcccCCH---HHcCCCCEEEEeccCC
Confidence 99998642 111111 22 3456777777765443
No 227
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.27 E-value=0.00058 Score=63.80 Aligned_cols=102 Identities=18% Similarity=0.145 Sum_probs=67.2
Q ss_pred CEEEEEcCChHHHH-HHHHHHhC-CCCEE-EecCCCCCcc----ccccCCCHHHHhh--cCCEEEEecCCChhhhcccCH
Q 021388 145 KTVGIIGLGRIGMA-VAKRAEAF-SCPIN-YYSRTEKPNL----KYKYYPSVVELAS--NCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 145 ~~igiiG~G~iG~~-iA~~l~~~-G~~V~-~~~~~~~~~~----~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~~ 215 (313)
.+|||||+|.||+. .++.++.. +++|. ++|++++... +...+.+++++++ +.|+|++++|...+...
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~---- 83 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPL---- 83 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHH----
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHH----
Confidence 47999999999997 77777765 67765 7788765321 2345679999998 78999999995443221
Q ss_pred HHHhccCCCcEEEEcC--CCccccHHHHHHHHHhCCee
Q 021388 216 EVIDALGPKGVLINIG--RGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 216 ~~l~~mk~ga~lIn~~--rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|.-++.-- --++-+.++|+++.++.++.
T Consensus 84 -~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 120 (364)
T 3e82_A 84 -ARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRL 120 (364)
T ss_dssp -HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCe
Confidence 223344554444322 23445566677777766654
No 228
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.26 E-value=0.00028 Score=60.90 Aligned_cols=82 Identities=12% Similarity=0.027 Sum_probs=54.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------cccc----CCC---HHHH-hhcCCEEEEecCCChhhh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KYKY----YPS---VVEL-ASNCHILVVACPLTEETR 210 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~~~----~~~---l~e~-~~~aDvV~~~lp~~~~t~ 210 (313)
++|.|+|+|.+|+.+|+.|...|++|.++|++++... +... ..+ ++++ +.++|+|+++++....+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 80 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNL 80 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHH
Confidence 4689999999999999999999999999998765211 1111 122 3343 678999999998654433
Q ss_pred cccCHHHHhccCCCcEEE
Q 021388 211 HIINREVIDALGPKGVLI 228 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lI 228 (313)
+-......+.+...+|
T Consensus 81 --~~~~~a~~~~~~~~ii 96 (218)
T 3l4b_C 81 --FIAQLVMKDFGVKRVV 96 (218)
T ss_dssp --HHHHHHHHTSCCCEEE
T ss_pred --HHHHHHHHHcCCCeEE
Confidence 2233444433444444
No 229
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.23 E-value=0.0005 Score=63.55 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=64.6
Q ss_pred CEEEEEcCChHHHHHHHHHH-h-CCCCEE-EecCCCCCc------cc--cccCCCHHHHhhc--CCEEEEecCCChhhhc
Q 021388 145 KTVGIIGLGRIGMAVAKRAE-A-FSCPIN-YYSRTEKPN------LK--YKYYPSVVELASN--CHILVVACPLTEETRH 211 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~-~-~G~~V~-~~~~~~~~~------~~--~~~~~~l~e~~~~--aDvV~~~lp~~~~t~~ 211 (313)
.+|||||+|.||+..++.++ . -++++. ++|++++.. .+ ...+.++++++++ .|+|++++|...+...
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 82 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESS 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHHH
Confidence 47999999999999999998 5 467765 778876532 12 3456789999876 9999999995443221
Q ss_pred ccCHHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCe
Q 021388 212 IINREVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 212 li~~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l 250 (313)
....++.|. +++.-- --++-+.++|.++.++.++
T Consensus 83 -----~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~ 118 (344)
T 3mz0_A 83 -----VLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGK 118 (344)
T ss_dssp -----HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSS
T ss_pred -----HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCC
Confidence 222344443 333221 2234455556666555444
No 230
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.23 E-value=0.0012 Score=59.90 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=70.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHhCCCCEE-EecCCC--CCccccccCCCHHHHhh--cCCEEEEecCCChhhhcccCHHH
Q 021388 144 GKTVGIIGL-GRIGMAVAKRAEAFSCPIN-YYSRTE--KPNLKYKYYPSVVELAS--NCHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 144 g~~igiiG~-G~iG~~iA~~l~~~G~~V~-~~~~~~--~~~~~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~~~~ 217 (313)
.++|+|+|. |++|+.+++.++..|+++. ..++.. ....+...+.+++++.. ..|++++++|. +.+...+ ++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~-~ea 84 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAA-LEA 84 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHH-HHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHH-HHH
Confidence 468999999 9999999999998899843 566654 22235556778999988 89999999983 2333333 333
Q ss_pred HhccCCCcEEEEcCCC-ccccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRG-PHVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg-~~vd~~al~~al~~~~l~ 251 (313)
.+. +-. .+|..+.| +..+.+.+.++.++..+.
T Consensus 85 ~~~-Gi~-~vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 85 AHA-GIP-LIVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp HHT-TCS-EEEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred HHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 321 222 24445544 234566888888887765
No 231
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.22 E-value=0.00074 Score=59.02 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=38.8
Q ss_pred cccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 136 YKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 136 ~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
+|...++.|++|.|||.|.+|..-++.|...|++|.++++...
T Consensus 23 ~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~ 65 (223)
T 3dfz_A 23 YTVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVS 65 (223)
T ss_dssp CEEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred cccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 4566789999999999999999999999999999999998654
No 232
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.22 E-value=0.00047 Score=64.21 Aligned_cols=66 Identities=15% Similarity=0.249 Sum_probs=50.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-h-CCCCEE-EecCCCCCcc------c--cccCCCHHHHhh--cCCEEEEecCCChh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAE-A-FSCPIN-YYSRTEKPNL------K--YKYYPSVVELAS--NCHILVVACPLTEE 208 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~-~-~G~~V~-~~~~~~~~~~------~--~~~~~~l~e~~~--~aDvV~~~lp~~~~ 208 (313)
...+|||||+|.||+..++.+. . -|+++. ++|++++... + ...+.++++++. +.|+|++++|...+
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 100 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAH 100 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 3458999999999999999998 4 367765 7898876421 2 345678999987 48999999995443
No 233
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.20 E-value=0.00095 Score=61.90 Aligned_cols=101 Identities=14% Similarity=0.097 Sum_probs=63.5
Q ss_pred CEEEEEcCChHHHH-HHHHHHhC-CCCEE-EecCCCCCc----cccccCCCHHHHhhc--CCEEEEecCCChhhhcccCH
Q 021388 145 KTVGIIGLGRIGMA-VAKRAEAF-SCPIN-YYSRTEKPN----LKYKYYPSVVELASN--CHILVVACPLTEETRHIINR 215 (313)
Q Consensus 145 ~~igiiG~G~iG~~-iA~~l~~~-G~~V~-~~~~~~~~~----~~~~~~~~l~e~~~~--aDvV~~~lp~~~~t~~li~~ 215 (313)
.+|||||+|.||+. .++.++.. +++|. ++|++++.. .+...+.++++++.+ .|+|++++|...+...
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~---- 83 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPL---- 83 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHH----
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHH----
Confidence 58999999999997 78888765 67765 778876432 123456799999976 9999999996544322
Q ss_pred HHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCe
Q 021388 216 EVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 216 ~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l 250 (313)
....++.|. +++.-- --++-+.++|.++.++.++
T Consensus 84 -~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~ 119 (352)
T 3kux_A 84 -AQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGL 119 (352)
T ss_dssp -HHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCC
Confidence 222333443 333322 2233444555555555444
No 234
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.15 E-value=0.00066 Score=63.28 Aligned_cols=101 Identities=13% Similarity=0.108 Sum_probs=63.4
Q ss_pred CEEEEEcCChHHHH-HHHHHHhC-CCCEE-EecCCCCCcc-------ccccCCCHHHHhhcC--CEEEEecCCChhhhcc
Q 021388 145 KTVGIIGLGRIGMA-VAKRAEAF-SCPIN-YYSRTEKPNL-------KYKYYPSVVELASNC--HILVVACPLTEETRHI 212 (313)
Q Consensus 145 ~~igiiG~G~iG~~-iA~~l~~~-G~~V~-~~~~~~~~~~-------~~~~~~~l~e~~~~a--DvV~~~lp~~~~t~~l 212 (313)
.+|||||+|.||+. +++.++.. ++++. ++|++++... +...+.++++++++. |+|++++|...+..
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~-- 83 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFE-- 83 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHHH--
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHHH--
Confidence 58999999999995 88988876 67765 7888765321 223467899999754 99999999433221
Q ss_pred cCHHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCe
Q 021388 213 INREVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 213 i~~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l 250 (313)
+ ....++.|. +++.-- --++-+.++|+++.++.++
T Consensus 84 ~---~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~ 120 (359)
T 3m2t_A 84 M---GLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDV 120 (359)
T ss_dssp H---HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTC
T ss_pred H---HHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCC
Confidence 2 223344443 343321 2333455556666655443
No 235
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.15 E-value=0.00058 Score=63.83 Aligned_cols=64 Identities=20% Similarity=0.178 Sum_probs=46.3
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc-----------cccCCCHHHHhhcCCEEEEecCCC
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK-----------YKYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~-----------~~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
-+.++|+|+|.|.+|+.+|+.|+. ..+|.+.|++.+.... .....++.++++++|+|+.++|..
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 344689999999999999999976 4789888876542110 111234677889999999999843
No 236
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.12 E-value=0.0012 Score=60.79 Aligned_cols=102 Identities=21% Similarity=0.174 Sum_probs=64.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhCC---CCE-EEecCCCCCcc------cc-ccCCCHHHHhh--cCCEEEEecCCChhhhc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFS---CPI-NYYSRTEKPNL------KY-KYYPSVVELAS--NCHILVVACPLTEETRH 211 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G---~~V-~~~~~~~~~~~------~~-~~~~~l~e~~~--~aDvV~~~lp~~~~t~~ 211 (313)
.++||||+|.||+..++.++..+ +++ .++|++++... +. ..+.+++++++ +.|+|++++|...+...
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~ 82 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAA 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHH
Confidence 47999999999999999998764 344 46788765321 22 34678999987 69999999995433221
Q ss_pred ccCHHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 212 IINREVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 212 li~~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|. +++.- ---++-+.++|.++.++.++.
T Consensus 83 -----~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~ 119 (334)
T 3ohs_X 83 -----VMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLF 119 (334)
T ss_dssp -----HHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCC
T ss_pred -----HHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCE
Confidence 222333443 33332 123444555666666655543
No 237
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.12 E-value=0.00083 Score=62.49 Aligned_cols=102 Identities=18% Similarity=0.139 Sum_probs=69.5
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCE-EEecCCCCCcc------c----cccCCCHHHHhh--cCCEEEEecCCChhhh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPI-NYYSRTEKPNL------K----YKYYPSVVELAS--NCHILVVACPLTEETR 210 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V-~~~~~~~~~~~------~----~~~~~~l~e~~~--~aDvV~~~lp~~~~t~ 210 (313)
.+|||||+|.||+.+++.+... ++++ .++|++++... + ...+.+++++++ +.|+|++++|...+.
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~- 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHV- 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHH-
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHH-
Confidence 4899999999999999998875 5665 57888765321 2 234578999986 599999999844322
Q ss_pred cccCHHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 211 HIINREVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 211 ~li~~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
+-....++.|. +++.- ..-++-+.++|.++.++.++.
T Consensus 86 ----~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 86 ----EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp ----HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred ----HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 22334466675 44432 133445667888888887765
No 238
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.10 E-value=0.00058 Score=62.31 Aligned_cols=89 Identities=16% Similarity=0.215 Sum_probs=58.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCcc--------cc------cc-C-CCHHHHhhcCCEEEEecCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNL--------KY------KY-Y-PSVVELASNCHILVVACPL 205 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~--------~~------~~-~-~~l~e~~~~aDvV~~~lp~ 205 (313)
.++|+|||.|.||..+|..|...|+ +|..+|++++... +. .. . .+. +.++.+|+|+++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAGP 85 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCCCCEEEECCCC
Confidence 4689999999999999999998898 8999998753211 00 00 1 133 567899999999953
Q ss_pred Chh---hh--------cc---cCHHHHhccCCCcEEEEcCCCc
Q 021388 206 TEE---TR--------HI---INREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 206 ~~~---t~--------~l---i~~~~l~~mk~ga~lIn~~rg~ 234 (313)
... ++ .+ +-++. ....+++++++++-|-
T Consensus 86 ~~~~g~~r~~~~~~n~~~~~~~~~~i-~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 86 RQKPGQSRLELVGATVNILKAIMPNL-VKVAPNAIYMLITNPV 127 (319)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHH-HHHCTTSEEEECCSSH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH-HHhCCCceEEEecCch
Confidence 321 00 01 11222 2236889999887653
No 239
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.00048 Score=66.74 Aligned_cols=108 Identities=18% Similarity=0.201 Sum_probs=66.1
Q ss_pred cccccCCCEEEEEcCChHHHHHHHHHHhC-CCCEEEecCCCCCcc------ccc----cC---CCHHHHhhcCCEEEEec
Q 021388 138 LTTKFTGKTVGIIGLGRIGMAVAKRAEAF-SCPINYYSRTEKPNL------KYK----YY---PSVVELASNCHILVVAC 203 (313)
Q Consensus 138 ~~~~l~g~~igiiG~G~iG~~iA~~l~~~-G~~V~~~~~~~~~~~------~~~----~~---~~l~e~~~~aDvV~~~l 203 (313)
.+..+.+++|+|+|.|.+|+.+++.|... |++|.+++|+.++.. +.. .. .++.++++.+|+|+.++
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t 96 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI 96 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence 34568899999999999999999999987 789999999764311 111 01 14556788999999999
Q ss_pred CCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 204 PLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 204 p~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
|..... . + ....++.|..+++++--. -+...+.++.++..+.
T Consensus 97 p~~~~~-~-v---~~a~l~~g~~vvd~~~~~-p~~~~Ll~~Ak~aGv~ 138 (467)
T 2axq_A 97 PYTFHP-N-V---VKSAIRTKTDVVTSSYIS-PALRELEPEIVKAGIT 138 (467)
T ss_dssp CGGGHH-H-H---HHHHHHHTCEEEECSCCC-HHHHHHHHHHHHHTCE
T ss_pred chhhhH-H-H---HHHHHhcCCEEEEeecCC-HHHHHHHHHHHHcCCE
Confidence 854221 1 1 112345567777764311 1235555555554443
No 240
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.08 E-value=0.0008 Score=64.81 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=67.7
Q ss_pred CCCEEEEEcCChH--HHHHHHHHHh----CCCCEEEecCCCCCcc--------------ccccCCCHHHHhhcCCEEEEe
Q 021388 143 TGKTVGIIGLGRI--GMAVAKRAEA----FSCPINYYSRTEKPNL--------------KYKYYPSVVELASNCHILVVA 202 (313)
Q Consensus 143 ~g~~igiiG~G~i--G~~iA~~l~~----~G~~V~~~~~~~~~~~--------------~~~~~~~l~e~~~~aDvV~~~ 202 (313)
.+++|+|||.|++ |..++..+.. .| +|..||+.++... ......++++.++.||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4569999999997 6788887764 46 9999998764210 122346889999999999999
Q ss_pred cCCC-----------hhhhcccCH------------------------HHHhccCCCcEEEEcCCCccccHHHHHHH
Q 021388 203 CPLT-----------EETRHIINR------------------------EVIDALGPKGVLINIGRGPHVDERELVSA 244 (313)
Q Consensus 203 lp~~-----------~~t~~li~~------------------------~~l~~mk~ga~lIn~~rg~~vd~~al~~a 244 (313)
++.. |.-.++... +.+....|++++||.+..--+-+.++.+.
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~ 159 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKV 159 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHH
Confidence 9632 222233111 23334468999999987655545555443
No 241
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.08 E-value=0.00068 Score=62.00 Aligned_cols=87 Identities=10% Similarity=0.194 Sum_probs=56.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc------------cccCCCHHHHhhcCCEEEEecCCCh--
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK------------YKYYPSVVELASNCHILVVACPLTE-- 207 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~------------~~~~~~l~e~~~~aDvV~~~lp~~~-- 207 (313)
.++|+|||.|.||..+|..+...|+ +|..+|..++ ..+ .....++ +.+++||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG 91 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSS 91 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCC
Confidence 3799999999999999999987787 8999998764 211 1112456 66899999999973211
Q ss_pred --------hhhcccCHHH---HhccCCCcEEEEcCCC
Q 021388 208 --------ETRHIINREV---IDALGPKGVLINIGRG 233 (313)
Q Consensus 208 --------~t~~li~~~~---l~~mk~ga~lIn~~rg 233 (313)
.+..++ .+. +....|++++++++.-
T Consensus 92 ~tR~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~sNP 127 (303)
T 2i6t_A 92 QSYLDVVQSNVDMF-RALVPALGHYSQHSVLLVASQP 127 (303)
T ss_dssp CCHHHHHHHHHHHH-HHHHHHHHHHTTTCEEEECSSS
T ss_pred CCHHHHHHHHHHHH-HHHHHHHHHhCCCeEEEEcCCh
Confidence 111111 122 2223489999998773
No 242
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.07 E-value=0.00039 Score=66.35 Aligned_cols=85 Identities=16% Similarity=0.180 Sum_probs=59.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----ccccc----CCC---HHHH-hhcCCEEEEecCCChhhh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKY----YPS---VVEL-ASNCHILVVACPLTEETR 210 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~----~~~---l~e~-~~~aDvV~~~lp~~~~t~ 210 (313)
+.+|.|+|+|.+|+.+++.|...|.+|++.|++++.. .+... ..+ |.++ +.++|+|+++++....+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 3569999999999999999999999999999887531 12211 122 3333 678999999998655443
Q ss_pred cccCHHHHhccCCCcEEEEc
Q 021388 211 HIINREVIDALGPKGVLINI 230 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~ 230 (313)
.+ ...+..+.|...+|--
T Consensus 84 ~i--~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 84 QL--TEMVKEHFPHLQIIAR 101 (413)
T ss_dssp HH--HHHHHHHCTTCEEEEE
T ss_pred HH--HHHHHHhCCCCeEEEE
Confidence 33 4455666676555443
No 243
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.05 E-value=0.00052 Score=63.53 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=61.1
Q ss_pred CEEEEEcCChHHHH-HHH-HHH-hCCCCEE-EecCCCCCcc------ccccCCCHHHHhhc--CCEEEEecCCChhhhcc
Q 021388 145 KTVGIIGLGRIGMA-VAK-RAE-AFSCPIN-YYSRTEKPNL------KYKYYPSVVELASN--CHILVVACPLTEETRHI 212 (313)
Q Consensus 145 ~~igiiG~G~iG~~-iA~-~l~-~~G~~V~-~~~~~~~~~~------~~~~~~~l~e~~~~--aDvV~~~lp~~~~t~~l 212 (313)
.+|||||+|.||+. .+. .+. .-++++. ++|++++... +...+.++++++.+ .|+|++++|...+...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~- 81 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEY- 81 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHHH-
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHHH-
Confidence 47999999999996 455 333 3467765 7888765321 22346789999976 8999999995443221
Q ss_pred cCHHHHhccCCCcEEEEcC--CCccccHHHHHHHHHhCCe
Q 021388 213 INREVIDALGPKGVLINIG--RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 213 i~~~~l~~mk~ga~lIn~~--rg~~vd~~al~~al~~~~l 250 (313)
....++.|.-++.-- --++-+.++|+++.++.++
T Consensus 82 ----~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~ 117 (345)
T 3f4l_A 82 ----AKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGL 117 (345)
T ss_dssp ----HHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred ----HHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 223344554444322 2233444555555555444
No 244
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.04 E-value=0.0018 Score=59.28 Aligned_cols=107 Identities=20% Similarity=0.217 Sum_probs=73.3
Q ss_pred ccCCCEEEEE-cC-ChHHHHHHHHHHhCCCCEE-EecCCC--CCccccccCCCHHHHhh--cCCEEEEecCCChhhhccc
Q 021388 141 KFTGKTVGII-GL-GRIGMAVAKRAEAFSCPIN-YYSRTE--KPNLKYKYYPSVVELAS--NCHILVVACPLTEETRHII 213 (313)
Q Consensus 141 ~l~g~~igii-G~-G~iG~~iA~~l~~~G~~V~-~~~~~~--~~~~~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li 213 (313)
-+..++++|| |. |++|+.+++.++..|++++ ..++.. ....+...+.+++|+.+ ..|++++++|.. ....++
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~~-~~~~~~ 88 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPP-FAAAAI 88 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCHH-HHHHHH
Confidence 4667889999 99 9999999999999999844 556653 22345556778999988 899999999932 233333
Q ss_pred CHHHHhccCCCcEEEEcCCCc-cccHHHHHHHHHhC-Cee
Q 021388 214 NREVIDALGPKGVLINIGRGP-HVDERELVSALVEG-RLG 251 (313)
Q Consensus 214 ~~~~l~~mk~ga~lIn~~rg~-~vd~~al~~al~~~-~l~ 251 (313)
++..+. .- ..+|+.+-|- .-++..+.+..++. .+.
T Consensus 89 -~e~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 89 -NEAIDA-EV-PLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp -HHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred -HHHHHC-CC-CEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 333331 11 3445666663 23455889999887 665
No 245
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.99 E-value=0.00091 Score=64.49 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=48.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------c-cc----cCC---CHHHHhhcCCEEEEecCCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------K-YK----YYP---SVVELASNCHILVVACPLT 206 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~-~~----~~~---~l~e~~~~aDvV~~~lp~~ 206 (313)
.+++|+|+|.|.||+.+++.|...|++|.+++|+.+... + .. ... ++.++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 468999999999999999999999999999998754211 1 10 112 3557788999999999854
No 246
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.98 E-value=0.0014 Score=59.70 Aligned_cols=109 Identities=21% Similarity=0.221 Sum_probs=70.2
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEEEecCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
++|+|||.|.+|.++|..|...|. +|..||+.++...+ .....+ .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 489999999999999999988787 89999987653210 011234 7789999999999753
Q ss_pred C--h-hhh-ccc--CH-------HHHhccCCCcEEEEcCCCccccHHHHHHHHH----hCCeeEEE--ec
Q 021388 206 T--E-ETR-HII--NR-------EVIDALGPKGVLINIGRGPHVDERELVSALV----EGRLGGAG--LD 256 (313)
Q Consensus 206 ~--~-~t~-~li--~~-------~~l~~mk~ga~lIn~~rg~~vd~~al~~al~----~~~l~ga~--lD 256 (313)
. + .++ .++ |. +.+....|++++++++ +.+|.-..+-.-. ..++.|.+ ||
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 3 1 111 111 11 2334457899999998 5555544332211 34566653 55
No 247
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.97 E-value=0.0024 Score=58.95 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=72.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhC---------CCCEE-EecCCCCCcc-------------ccccCC--CHHHHhh--cCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF---------SCPIN-YYSRTEKPNL-------------KYKYYP--SVVELAS--NCH 197 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~---------G~~V~-~~~~~~~~~~-------------~~~~~~--~l~e~~~--~aD 197 (313)
.+|||||+|.||+.+++.+... +.+|. ++|++..... ....+. ++++++. +.|
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iD 82 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYD 82 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCC
Confidence 3799999999999999999764 56654 5576543211 012233 8899885 489
Q ss_pred EEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccc-cHHHHHHHHHhCCee
Q 021388 198 ILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHV-DERELVSALVEGRLG 251 (313)
Q Consensus 198 vV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~v-d~~al~~al~~~~l~ 251 (313)
+|+.++|...+... .-+-....|+.|.-+|....+.+. ..+.|.++.++.+..
T Consensus 83 vVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~ 136 (327)
T 3do5_A 83 VLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVR 136 (327)
T ss_dssp EEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCc
Confidence 99999996543222 123356778889888887665553 667888888887765
No 248
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.96 E-value=0.00079 Score=61.84 Aligned_cols=89 Identities=16% Similarity=0.220 Sum_probs=57.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc--------ccc-------CCCHHHHhhcCCEEEEecCCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK--------YKY-------YPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~--------~~~-------~~~l~e~~~~aDvV~~~lp~~ 206 (313)
.++|+|||.|.||.++|..++..|. +|..+|++++...+ ... ..+..+.+++||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3699999999999999999987665 79999987642111 000 112346789999999997643
Q ss_pred hhh-----------hcccC--HHHHhccCCCcEEEEcCC
Q 021388 207 EET-----------RHIIN--REVIDALGPKGVLINIGR 232 (313)
Q Consensus 207 ~~t-----------~~li~--~~~l~~mk~ga~lIn~~r 232 (313)
..- ..++. .+.+....|++++++++.
T Consensus 86 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 86 QKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp CCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 210 01110 112223358889999754
No 249
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.95 E-value=0.0011 Score=62.40 Aligned_cols=61 Identities=26% Similarity=0.395 Sum_probs=47.4
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc----c---ccCCC---HHHHhhcCCEEEE
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK----Y---KYYPS---VVELASNCHILVV 201 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~----~---~~~~~---l~e~~~~aDvV~~ 201 (313)
-+.|++|+|+|.|.+|+.+++.++.+|++|+++|+++..... . ....+ +.++++++|+|+.
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 478999999999999999999999999999999976643211 0 01222 6678889999855
No 250
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.95 E-value=0.0022 Score=58.95 Aligned_cols=110 Identities=19% Similarity=0.223 Sum_probs=65.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc-------c-------ccCCCHHHHhhcCCEEEEecCCCh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK-------Y-------KYYPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~-------~-------~~~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
.++|+|||.|.+|.+++..+...|. +|..+|..++...+ . ....+..+.+++||+|+++.+...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~ 86 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANR 86 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 3689999999999999999998887 89999987653221 0 011122456899999999987432
Q ss_pred hhhcc------------cC--HHHHhccCCCcEEEEcCCCccccHHH--HHHH--HHhCCeeEE--Eec
Q 021388 208 ETRHI------------IN--REVIDALGPKGVLINIGRGPHVDERE--LVSA--LVEGRLGGA--GLD 256 (313)
Q Consensus 208 ~t~~l------------i~--~~~l~~mk~ga~lIn~~rg~~vd~~a--l~~a--l~~~~l~ga--~lD 256 (313)
. .+. +. .+.+....|++++++++ ..+|.-. +.+. +...++.|. .||
T Consensus 87 k-~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~~~~~~k~s~~p~~rviG~gt~Ld 152 (318)
T 1y6j_A 87 K-PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS--NPVDIITYMIQKWSGLPVGKVIGSGTVLD 152 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS--SSHHHHHHHHHHHHTCCTTTEEECTTHHH
T ss_pred C-CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHcCCCHHHEeccCCchH
Confidence 1 111 10 11222336899999974 3444433 3333 234467665 256
No 251
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.92 E-value=0.0024 Score=54.63 Aligned_cols=86 Identities=15% Similarity=0.196 Sum_probs=59.5
Q ss_pred CEEEEEc-CChHHHHHHHHHH-hCCCCEEEecCCCC-Ccc-------ccc-------cCCCHHHHhhcCCEEEEecCCCh
Q 021388 145 KTVGIIG-LGRIGMAVAKRAE-AFSCPINYYSRTEK-PNL-------KYK-------YYPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~-~~G~~V~~~~~~~~-~~~-------~~~-------~~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
|++.|.| .|.||+.+++.|. ..|++|.+.+|+++ ... ... ...+++++++.+|+|+.+.....
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 6799999 6999999999999 89999999998765 221 111 11245677889999998886432
Q ss_pred hhhcccCHHHHhccCC-C-cEEEEcCCCc
Q 021388 208 ETRHIINREVIDALGP-K-GVLINIGRGP 234 (313)
Q Consensus 208 ~t~~li~~~~l~~mk~-g-a~lIn~~rg~ 234 (313)
.. .+..+..|+. | ..||++|...
T Consensus 86 -~~---~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 86 -SD---MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp -HH---HHHHHHHHHHTTCCEEEEEEETT
T ss_pred -hh---HHHHHHHHHhcCCCeEEEEeece
Confidence 11 3555555543 2 4678877544
No 252
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.91 E-value=0.0024 Score=59.40 Aligned_cols=101 Identities=17% Similarity=0.153 Sum_probs=63.2
Q ss_pred CEEEEEcCChHHHH-HHHHHHhC-CCCEE-EecCCCCCcc----ccccCCCHHHHhhc--CCEEEEecCCChhhhcccCH
Q 021388 145 KTVGIIGLGRIGMA-VAKRAEAF-SCPIN-YYSRTEKPNL----KYKYYPSVVELASN--CHILVVACPLTEETRHIINR 215 (313)
Q Consensus 145 ~~igiiG~G~iG~~-iA~~l~~~-G~~V~-~~~~~~~~~~----~~~~~~~l~e~~~~--aDvV~~~lp~~~~t~~li~~ 215 (313)
.+|||||+|.||+. .+..++.. +++|. ++|++++... +...+.++++++++ .|+|++|+|...+...
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~---- 81 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEY---- 81 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHH----
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHH----
Confidence 48999999999997 77777765 67764 6788765421 23346789999976 8999999995433221
Q ss_pred HHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCe
Q 021388 216 EVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 216 ~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l 250 (313)
....++.|. +++.-- --++-+.++|+++.++.++
T Consensus 82 -~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~ 117 (362)
T 3fhl_A 82 -AGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGL 117 (362)
T ss_dssp -HHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCC
Confidence 222333443 333321 2334445556665554443
No 253
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.90 E-value=0.0077 Score=54.86 Aligned_cols=155 Identities=15% Similarity=0.148 Sum_probs=98.3
Q ss_pred HHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccc
Q 021388 60 ELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLT 139 (313)
Q Consensus 60 ~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~ 139 (313)
.+++++. -.|......-..+. ..+...+|+|.|..+...-++ .+++=++.+.+++ |
T Consensus 95 rvls~~~--D~iviR~~~~~~~~-~la~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~-------------------g 150 (301)
T 2ef0_A 95 KNLERFV--EGIAARVFRHETVE-ALARHAKVPVVNALSDRAHPL--QALADLLTLKEVF-------------------G 150 (301)
T ss_dssp HHHTTTC--SEEEEECSSHHHHH-HHHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH-------------------S
T ss_pred HHHHHhC--CEEEEecCChHHHH-HHHHHCCCCEEeCCCCccCch--HHHHHHHHHHHHh-------------------C
Confidence 4555553 34544443322221 123345799999765443222 1222223333221 1
Q ss_pred cccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCccc-------cccCCCHHHHhhcCCEEEEecCCC-----
Q 021388 140 TKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNLK-------YKYYPSVVELASNCHILVVACPLT----- 206 (313)
Q Consensus 140 ~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~-------~~~~~~l~e~~~~aDvV~~~lp~~----- 206 (313)
.+.|.+|+++|= +++.++.+..+..+|++|.+..|..-.... .....++++.++++|+|..-.-..
T Consensus 151 -~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~ 229 (301)
T 2ef0_A 151 -GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEA 229 (301)
T ss_dssp -CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC------
T ss_pred -CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCccc
Confidence 378999999997 899999999999999999998875532221 334678999999999998844310
Q ss_pred -hh------hhcccCHHHHhccCCCcEEEEcC---CCccccHH
Q 021388 207 -EE------TRHIINREVIDALGPKGVLINIG---RGPHVDER 239 (313)
Q Consensus 207 -~~------t~~li~~~~l~~mk~ga~lIn~~---rg~~vd~~ 239 (313)
+. ...-++++.++.+|++++|.-+. ||.=|+.+
T Consensus 230 ~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 230 EREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEE 272 (301)
T ss_dssp --CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred chhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHH
Confidence 01 12456889999999999999888 56544443
No 254
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.88 E-value=0.0011 Score=60.75 Aligned_cols=86 Identities=22% Similarity=0.251 Sum_probs=57.6
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEEEecCCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
++|+|||.|.||..+|..+...|+ +|..+|++++...+ .....+. +.+++||+|+++.+..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 589999999999999999998886 89999987642211 0112456 6789999999998532
Q ss_pred hh-----------hhcccCHH---HHhccCCCcEEEEcCC
Q 021388 207 EE-----------TRHIINRE---VIDALGPKGVLINIGR 232 (313)
Q Consensus 207 ~~-----------t~~li~~~---~l~~mk~ga~lIn~~r 232 (313)
.. +..++ ++ .+....|++++++++-
T Consensus 82 ~~~g~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADIT-RACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp -------CHHHHHHHHHH-HHHHHHHGGGCTTCEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEcCC
Confidence 21 00111 12 2233358999999754
No 255
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.87 E-value=0.0013 Score=60.52 Aligned_cols=94 Identities=15% Similarity=0.222 Sum_probs=61.5
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc---------------cccC-CCHHHHhhcCCEEEEecCCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK---------------YKYY-PSVVELASNCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~---------------~~~~-~~l~e~~~~aDvV~~~lp~~ 206 (313)
++|+|||.|.||.++|..+...|+ +|..+|+.++...+ .... .+..+.+++||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 489999999999999999987776 79999998753211 0111 24467889999999987543
Q ss_pred hh---hh-ccc--C----H---HHHhccCCCcEEEEcCCCccccHHH
Q 021388 207 EE---TR-HII--N----R---EVIDALGPKGVLINIGRGPHVDERE 240 (313)
Q Consensus 207 ~~---t~-~li--~----~---~~l~~mk~ga~lIn~~rg~~vd~~a 240 (313)
.. ++ .++ | + +.+....|++++++++. .+|.-.
T Consensus 81 ~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN--Pvd~~t 125 (314)
T 3nep_X 81 RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN--PLDVMT 125 (314)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS--SHHHHH
T ss_pred CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC--chhHHH
Confidence 21 11 111 1 1 23334568999999984 444433
No 256
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.86 E-value=0.0021 Score=59.23 Aligned_cols=90 Identities=18% Similarity=0.259 Sum_probs=60.2
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc---------------cc--cCCCHHHHhhcCCEEEEec
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK---------------YK--YYPSVVELASNCHILVVAC 203 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~---------------~~--~~~~l~e~~~~aDvV~~~l 203 (313)
...++|+|||.|.+|..+|..+...|+ +|..+|+.++...+ .. ...+. +.+++||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 456799999999999999999998888 99999998753211 11 12344 7889999999997
Q ss_pred CCC--hh-hhc-cc--C----H---HHHhccCCCcEEEEcCC
Q 021388 204 PLT--EE-TRH-II--N----R---EVIDALGPKGVLINIGR 232 (313)
Q Consensus 204 p~~--~~-t~~-li--~----~---~~l~~mk~ga~lIn~~r 232 (313)
+.. +. ++. ++ | + +.+....|++++++++.
T Consensus 84 g~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 84 GVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 532 11 111 11 1 1 12233458999999984
No 257
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.85 E-value=0.0007 Score=58.94 Aligned_cols=85 Identities=9% Similarity=0.067 Sum_probs=56.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc----ccccc----CCC---HHHH-hhcCCEEEEecCCChhhh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN----LKYKY----YPS---VVEL-ASNCHILVVACPLTEETR 210 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~----~~~~~----~~~---l~e~-~~~aDvV~~~lp~~~~t~ 210 (313)
..+++.|+|+|.+|+.+++.|...|+ |.+.|++++.. .+... ..+ ++++ +.++|.|++++|..+.+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n- 85 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET- 85 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH-
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH-
Confidence 34689999999999999999999999 99999876531 12111 122 3333 67899999999865433
Q ss_pred cccCHHHHhccCCC-cEEEEc
Q 021388 211 HIINREVIDALGPK-GVLINI 230 (313)
Q Consensus 211 ~li~~~~l~~mk~g-a~lIn~ 230 (313)
+.-...+..+.++ .+++.+
T Consensus 86 -~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 86 -IHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp -HHHHHHHHHHCSSSEEEEEC
T ss_pred -HHHHHHHHHHCCCCeEEEEE
Confidence 2334455666676 444444
No 258
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.85 E-value=0.0012 Score=61.47 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=63.0
Q ss_pred CEEEEEcCChHHHH-HHHHHHhC-CCCEE-EecCCCCCcc----ccccCCCHHHHhh--cCCEEEEecCCChhhhcccCH
Q 021388 145 KTVGIIGLGRIGMA-VAKRAEAF-SCPIN-YYSRTEKPNL----KYKYYPSVVELAS--NCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 145 ~~igiiG~G~iG~~-iA~~l~~~-G~~V~-~~~~~~~~~~----~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~~ 215 (313)
.+|||||+|.||+. .++.++.. +++|. ++|++++... +...+.+++++++ +.|+|++++|...+...
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~---- 81 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEH---- 81 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHH----
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHH----
Confidence 48999999999997 67777765 67764 6787764311 2345678999997 78999999996544322
Q ss_pred HHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCe
Q 021388 216 EVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 216 ~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l 250 (313)
....++.|. +++.-- --++-+.++|+++.++.++
T Consensus 82 -~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~ 117 (358)
T 3gdo_A 82 -TMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGV 117 (358)
T ss_dssp -HHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 223333443 333211 2233445556665555443
No 259
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.84 E-value=0.0036 Score=56.61 Aligned_cols=101 Identities=14% Similarity=0.096 Sum_probs=65.9
Q ss_pred CEEEEEcCChHHHHHHHHHHh----CCCCEE-EecCCCCCc-cccccCCCHHHHhh--cCCEEEEecCCChhhhcccCHH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEA----FSCPIN-YYSRTEKPN-LKYKYYPSVVELAS--NCHILVVACPLTEETRHIINRE 216 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~----~G~~V~-~~~~~~~~~-~~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~~~ 216 (313)
.+|||||+|.||+..++.+.. -++++. ++|++.... .+.. ..+++++++ +.|+|++++|...+. +.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~-----~~ 81 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLDEVR-QISLEDALRSQEIDVAYICSESSSHE-----DY 81 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHH-----HH
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHHHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHH-----HH
Confidence 489999999999999988864 356654 667654321 1222 468999987 689999999944332 22
Q ss_pred HHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 217 VIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 217 ~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|. +++.- ..-++-+.++|.++.++.++.
T Consensus 82 ~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 82 IRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp HHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 233445554 56653 223445667788888776654
No 260
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.81 E-value=0.0005 Score=63.60 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=60.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc----------------cccCCCHHHHhhcCCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK----------------YKYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~----------------~~~~~~l~e~~~~aDvV~~~lp 204 (313)
..++|+|||.|.||..+|..+...|+ +|..+|...+...+ .....+.++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999988887 79999987642111 011235555 899999999864
Q ss_pred CCh---hhh-ccc--C----H---HHHhccCCCcEEEEcCC
Q 021388 205 LTE---ETR-HII--N----R---EVIDALGPKGVLINIGR 232 (313)
Q Consensus 205 ~~~---~t~-~li--~----~---~~l~~mk~ga~lIn~~r 232 (313)
... .++ .++ | + +.+....|++++++++.
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 321 111 111 1 1 23334478999999874
No 261
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.80 E-value=0.012 Score=53.76 Aligned_cols=91 Identities=8% Similarity=0.057 Sum_probs=68.9
Q ss_pred ccCCCEEEEEcCC--hHHHHHHHHHHhCCCCEEEecCCCCCcc--------------c--cccCCCHHHHhhcCCEEEEe
Q 021388 141 KFTGKTVGIIGLG--RIGMAVAKRAEAFSCPINYYSRTEKPNL--------------K--YKYYPSVVELASNCHILVVA 202 (313)
Q Consensus 141 ~l~g~~igiiG~G--~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~e~~~~aDvV~~~ 202 (313)
.+.|.+|+++|=| ++.++++..+..+|++|.+..|..-... | .....++++.++++|+|..-
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 3789999999986 9999999999999999999887543211 1 22357899999999999884
Q ss_pred cCCC-------hh-----hhcccCHHHHhccCCCcEEEEcC
Q 021388 203 CPLT-------EE-----TRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 203 lp~~-------~~-----t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
.-.. ++ ...-++++.++.+|++++|.-+.
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCL 265 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECS
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCC
Confidence 4310 00 12456888888889999888876
No 262
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.80 E-value=0.0015 Score=56.64 Aligned_cols=92 Identities=17% Similarity=0.049 Sum_probs=61.7
Q ss_pred cCCCEEEEEc-CChHHHHHHHHHHhCC-CCEEEecCCCCCccc-----c-------ccCCCHHHHhhcCCEEEEecCCCh
Q 021388 142 FTGKTVGIIG-LGRIGMAVAKRAEAFS-CPINYYSRTEKPNLK-----Y-------KYYPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 142 l~g~~igiiG-~G~iG~~iA~~l~~~G-~~V~~~~~~~~~~~~-----~-------~~~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
...++|.|.| .|.||+.+++.|...| ++|.+++|+++.... . ....+++++++.+|+|+.+.....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 3457899999 7999999999999999 899999987653221 1 112245677899999998876432
Q ss_pred hhhcccCHHHHhccCC--CcEEEEcCCCcc
Q 021388 208 ETRHIINREVIDALGP--KGVLINIGRGPH 235 (313)
Q Consensus 208 ~t~~li~~~~l~~mk~--ga~lIn~~rg~~ 235 (313)
.. ...+..+..|+. ...||++|....
T Consensus 101 ~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 101 LD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp HH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred hh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 21 112344555543 246888887443
No 263
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.79 E-value=0.0012 Score=58.53 Aligned_cols=87 Identities=15% Similarity=0.178 Sum_probs=59.3
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCC-------------------CCcc-----------cc--cc-
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTE-------------------KPNL-----------KY--KY- 185 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~-------------------~~~~-----------~~--~~- 185 (313)
..|.+++|.|||+|.+|..+|+.|...|. ++.++|+.. .+.. .. ..
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 35889999999999999999999999998 688888765 1100 00 00
Q ss_pred ---C--CCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEc
Q 021388 186 ---Y--PSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINI 230 (313)
Q Consensus 186 ---~--~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~ 230 (313)
. .+++++++++|+|+.+++ +.+++..+++..... +..+|+.
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred eccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 1 124567788999988885 456776665544442 3335554
No 264
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.79 E-value=0.0019 Score=59.75 Aligned_cols=102 Identities=12% Similarity=0.129 Sum_probs=61.5
Q ss_pred CEEEEEcCChHHH-HHHHHHHhC-CCCEE-EecCCCCCc-------cccccCCCHHHHhhc--CCEEEEecCCChhhhcc
Q 021388 145 KTVGIIGLGRIGM-AVAKRAEAF-SCPIN-YYSRTEKPN-------LKYKYYPSVVELASN--CHILVVACPLTEETRHI 212 (313)
Q Consensus 145 ~~igiiG~G~iG~-~iA~~l~~~-G~~V~-~~~~~~~~~-------~~~~~~~~l~e~~~~--aDvV~~~lp~~~~t~~l 212 (313)
.+|||||+|.||+ ..+..++.. +++|. ++|++.... .+...+.++++++.+ .|+|++++|...+...
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~- 81 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYDL- 81 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHHHH-
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHHHH-
Confidence 3799999999998 567767655 67764 778772211 123456789999976 8999999995433221
Q ss_pred cCHHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCee
Q 021388 213 INREVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 213 i~~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l~ 251 (313)
....++.|. +++.-- --++-+.++|.++.++.++.
T Consensus 82 ----~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~ 118 (349)
T 3i23_A 82 ----AKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVV 118 (349)
T ss_dssp ----HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred ----HHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCe
Confidence 222333442 333211 12334455566666555443
No 265
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.75 E-value=0.0018 Score=59.84 Aligned_cols=96 Identities=20% Similarity=0.232 Sum_probs=61.6
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc--------------cccCCCHHHHhhcCCEEEEecCC
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK--------------YKYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~--------------~~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
-.+++|+|||.|.||.++|..+...|. ++..+|+.++...+ .....+..+.+++||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 456799999999999999999987777 79999986542111 01122335678999999998743
Q ss_pred Ch---hhhc-cc--C----H---HHHhccCCCcEEEEcCCCccccHH
Q 021388 206 TE---ETRH-II--N----R---EVIDALGPKGVLINIGRGPHVDER 239 (313)
Q Consensus 206 ~~---~t~~-li--~----~---~~l~~mk~ga~lIn~~rg~~vd~~ 239 (313)
.. .++. ++ | . +.+....|++++++++. .+|.-
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN--Pvdi~ 131 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN--PVDIL 131 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECSS--SHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC--chHHH
Confidence 21 1121 22 1 1 23344568999999974 44443
No 266
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.75 E-value=0.0016 Score=56.54 Aligned_cols=61 Identities=15% Similarity=0.206 Sum_probs=41.7
Q ss_pred CEEEEEcCChHHHHHHHH--HHhCCCCEE-EecCCCCCcc----c--cccCCCHHHHhhcCCEEEEecCC
Q 021388 145 KTVGIIGLGRIGMAVAKR--AEAFSCPIN-YYSRTEKPNL----K--YKYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~--l~~~G~~V~-~~~~~~~~~~----~--~~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
.+++|||.|++|+.+++. ....|+++. ++|.+++... + .....++++++++.|++++++|.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 469999999999999993 446688865 6677665321 1 12346788888777999999994
No 267
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.74 E-value=0.0021 Score=57.72 Aligned_cols=92 Identities=15% Similarity=0.198 Sum_probs=62.3
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc--------c--ccCCCHHHHhhcCCEEEEecCCChh
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK--------Y--KYYPSVVELASNCHILVVACPLTEE 208 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~--------~--~~~~~l~e~~~~aDvV~~~lp~~~~ 208 (313)
.++.++++.|+|.|..+++++..|...|. +|.+++|+.++... . .......+.++++|+|+.++|..-.
T Consensus 121 ~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~ 200 (269)
T 3tum_A 121 FEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMG 200 (269)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCS
T ss_pred CCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccC
Confidence 35788999999999999999999999997 58999998754221 0 0011112335678999999885422
Q ss_pred h--hcccCHHHHhccCCCcEEEEcC
Q 021388 209 T--RHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 209 t--~~li~~~~l~~mk~ga~lIn~~ 231 (313)
. ..-++...++.++++.++.|+-
T Consensus 201 ~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 201 TRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp TTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred CCCCCCCChHHHhccCCCcEEEEEc
Confidence 1 1124566667777777666654
No 268
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.74 E-value=0.0054 Score=59.49 Aligned_cols=97 Identities=12% Similarity=0.097 Sum_probs=70.0
Q ss_pred ccCCCEEEEEcCCh----------HHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhh
Q 021388 141 KFTGKTVGIIGLGR----------IGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETR 210 (313)
Q Consensus 141 ~l~g~~igiiG~G~----------iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~ 210 (313)
.+.|++|+|+|+-- -...+++.|...|.+|.+|||............++++.++.+|+|++++...+ -+
T Consensus 350 ~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~~~-f~ 428 (478)
T 3g79_A 350 KMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVVLAGHSA-YS 428 (478)
T ss_dssp CSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCCBTTBCEESCHHHHHTTCSEEEECSCCHH-HH
T ss_pred CCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCcccccCcceecCHHHHHhcCCEEEEecCCHH-HH
Confidence 46899999999853 46889999999999999999977632223335688999999999999987543 22
Q ss_pred cccC-HHHHhccC-CCcEEEEcCCCccccHHHH
Q 021388 211 HIIN-REVIDALG-PKGVLINIGRGPHVDEREL 241 (313)
Q Consensus 211 ~li~-~~~l~~mk-~ga~lIn~~rg~~vd~~al 241 (313)
. ++ +.+.+.|+ ++.+++|+ |+- .|.+.+
T Consensus 429 ~-~d~~~~~~~~~~~~~~i~D~-rn~-~~~~~~ 458 (478)
T 3g79_A 429 S-LKADWAKKVSAKANPVIIDG-RNV-IEPDEF 458 (478)
T ss_dssp S-CCHHHHHHHHCCSSCEEEES-SSC-SCHHHH
T ss_pred h-hhHHHHHHHhccCCCEEEEC-CCC-CCHHHH
Confidence 2 33 34455677 48899994 654 454433
No 269
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.70 E-value=0.0025 Score=61.83 Aligned_cols=109 Identities=13% Similarity=0.149 Sum_probs=71.9
Q ss_pred CCEEEEEcCChHH--HHHHHHHH---hC-CCCEEEecCCCCCcc-----------------ccccCCCHHHHhhcCCEEE
Q 021388 144 GKTVGIIGLGRIG--MAVAKRAE---AF-SCPINYYSRTEKPNL-----------------KYKYYPSVVELASNCHILV 200 (313)
Q Consensus 144 g~~igiiG~G~iG--~~iA~~l~---~~-G~~V~~~~~~~~~~~-----------------~~~~~~~l~e~~~~aDvV~ 200 (313)
.++|+|||.|.|| .++|..+. ++ |.+|..||+.++... ......++++.++.||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 4689999999974 65666664 33 788999999775211 0112357888899999999
Q ss_pred EecCCCh-----------hhhcccC----------------------------HHHHhccCCCcEEEEcCCCccccHHHH
Q 021388 201 VACPLTE-----------ETRHIIN----------------------------REVIDALGPKGVLINIGRGPHVDEREL 241 (313)
Q Consensus 201 ~~lp~~~-----------~t~~li~----------------------------~~~l~~mk~ga~lIn~~rg~~vd~~al 241 (313)
+++|... .-.+++. .+.+....|++++||++-.--+-+.++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 9997410 0001100 123444568999999988766666666
Q ss_pred HHHHHhCCeeEE
Q 021388 242 VSALVEGRLGGA 253 (313)
Q Consensus 242 ~~al~~~~l~ga 253 (313)
.+ +...++.|.
T Consensus 163 ~k-~p~~rviG~ 173 (480)
T 1obb_A 163 TR-TVPIKAVGF 173 (480)
T ss_dssp HH-HSCSEEEEE
T ss_pred HH-CCCCcEEec
Confidence 55 666677765
No 270
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.69 E-value=0.0018 Score=61.93 Aligned_cols=102 Identities=14% Similarity=0.149 Sum_probs=66.6
Q ss_pred CEEEEEcCChHHH-HHHHHHHhC-CCCE-EEecCCCCCc------cccc-----cCCCHHHHhh--cCCEEEEecCCChh
Q 021388 145 KTVGIIGLGRIGM-AVAKRAEAF-SCPI-NYYSRTEKPN------LKYK-----YYPSVVELAS--NCHILVVACPLTEE 208 (313)
Q Consensus 145 ~~igiiG~G~iG~-~iA~~l~~~-G~~V-~~~~~~~~~~------~~~~-----~~~~l~e~~~--~aDvV~~~lp~~~~ 208 (313)
.+|||||+|.||+ .+++.+... ++++ .++|++++.. .+.. .+.++++++. +.|+|++++|...+
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~h 163 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLH 163 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGH
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchhH
Confidence 5899999999997 899988765 5675 5788876432 1222 3678999987 79999999995433
Q ss_pred hhcccCHHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 209 TRHIINREVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 209 t~~li~~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
.. -....++.|. +++.- .--++-+.++|.++.++.++.
T Consensus 164 ~~-----~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 203 (433)
T 1h6d_A 164 AE-----FAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKK 203 (433)
T ss_dssp HH-----HHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCC
T ss_pred HH-----HHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCe
Confidence 22 2223445554 45442 123344556677777666554
No 271
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.67 E-value=0.0045 Score=59.53 Aligned_cols=97 Identities=20% Similarity=0.314 Sum_probs=69.7
Q ss_pred cccCCCEEEEEcCC----------hHHHHHHHHHHhCCCCEEEecCCCCCc-----cccccCCCHHHHhhcCCEEEEecC
Q 021388 140 TKFTGKTVGIIGLG----------RIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 140 ~~l~g~~igiiG~G----------~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~l~e~~~~aDvV~~~lp 204 (313)
..+.|++|+|+|+. .-...+++.|...|++|.+|||..... .+.....++++.++.+|+|++++.
T Consensus 318 ~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~ 397 (446)
T 4a7p_A 318 GDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVTE 397 (446)
T ss_dssp SCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECSC
T ss_pred ccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEeeC
Confidence 35789999999997 678899999999999999999976421 123445688899999999999987
Q ss_pred CChhhhcccCHH-HHhccCCCcEEEEcCCCccccHHHH
Q 021388 205 LTEETRHIINRE-VIDALGPKGVLINIGRGPHVDEREL 241 (313)
Q Consensus 205 ~~~~t~~li~~~-~l~~mk~ga~lIn~~rg~~vd~~al 241 (313)
..+ -+ -++-+ +.+.|+ +.+++|+ |+ +.|.+.+
T Consensus 398 ~~~-f~-~~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 398 WDA-FR-ALDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp CTT-TT-SCCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred CHH-hh-cCCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 543 12 23433 444565 5678884 54 3455444
No 272
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.67 E-value=0.016 Score=53.06 Aligned_cols=91 Identities=9% Similarity=0.144 Sum_probs=69.3
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc--------------c--cccCCCHHHHhhcCCEEEEec
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL--------------K--YKYYPSVVELASNCHILVVAC 203 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~e~~~~aDvV~~~l 203 (313)
.+.|.+|+++|= +++.++++..+..+|++|.+..|..-... | .....+++|.++++|+|..-.
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 378999999997 89999999999999999999887543111 1 223578999999999998854
Q ss_pred CC-------Chh-----hhcccCHHHHhccCCCcEEEEcC
Q 021388 204 PL-------TEE-----TRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 204 p~-------~~~-----t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
-. .++ ...-++.+.++.+|++++|.-+.
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~l 271 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCL 271 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECS
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCC
Confidence 31 111 12456888999999999988876
No 273
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.65 E-value=0.003 Score=60.49 Aligned_cols=101 Identities=12% Similarity=0.096 Sum_probs=64.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCE-EEecCCCCCcc---------c---cccCC----CHHHHhh--cCCEEEEecC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPI-NYYSRTEKPNL---------K---YKYYP----SVVELAS--NCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V-~~~~~~~~~~~---------~---~~~~~----~l~e~~~--~aDvV~~~lp 204 (313)
.+|||||+|.||+..++.+... |+++ .++|++++... + ...+. +++++++ +.|+|++++|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 5899999999999999998875 6775 47788765321 1 23355 8999987 5899999999
Q ss_pred CChhhhcccCHHHHhccCCCc-EEEEc-CCCccccHHHHHHHHHhCCe
Q 021388 205 LTEETRHIINREVIDALGPKG-VLINI-GRGPHVDERELVSALVEGRL 250 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga-~lIn~-~rg~~vd~~al~~al~~~~l 250 (313)
...+.. -..+.|+.|. +++.- .--++-+.++|+++.++.++
T Consensus 101 ~~~h~~-----~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~ 143 (444)
T 2ixa_A 101 WEWHHE-----HGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGV 143 (444)
T ss_dssp GGGHHH-----HHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCC
T ss_pred cHHHHH-----HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCC
Confidence 543322 2233445554 33331 11233455566666655444
No 274
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.65 E-value=0.0034 Score=57.82 Aligned_cols=96 Identities=19% Similarity=0.244 Sum_probs=62.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc---------------cccC-CCHHHHhhcCCEEEEecCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK---------------YKYY-PSVVELASNCHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~---------------~~~~-~~l~e~~~~aDvV~~~lp~ 205 (313)
..++|+|||.|.||.++|..+...|+ +|..+|+.++...+ .... .+-.+.+++||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 35799999999999999999987777 89999988753211 0111 1224688999999998743
Q ss_pred C--hh-hhc-cc--C----H---HHHhccCCCcEEEEcCCCccccHHH
Q 021388 206 T--EE-TRH-II--N----R---EVIDALGPKGVLINIGRGPHVDERE 240 (313)
Q Consensus 206 ~--~~-t~~-li--~----~---~~l~~mk~ga~lIn~~rg~~vd~~a 240 (313)
. +. ++. ++ | + +.+....|++++++++ +.+|.-.
T Consensus 84 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~~t 129 (321)
T 3p7m_A 84 PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDIMV 129 (321)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHHHH
T ss_pred CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHHHH
Confidence 2 11 110 11 1 1 1223345889999995 4455433
No 275
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.65 E-value=0.0043 Score=56.34 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=67.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCCE-EEecCCCC--CccccccCCCHHHHhh--cCCEEEEecCCChhhhcccCHHHH
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCPI-NYYSRTEK--PNLKYKYYPSVVELAS--NCHILVVACPLTEETRHIINREVI 218 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~V-~~~~~~~~--~~~~~~~~~~l~e~~~--~aDvV~~~lp~~~~t~~li~~~~l 218 (313)
.+++|+|. |++|+.+++.+...|+++ ...++... ...+...+.+++++.. ..|++++++|.. .+...+ ++.+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~-~~~~~v-~ea~ 91 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAP-FAKDAV-FEAI 91 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHH-HHHHHH-HHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHH-HHHHHH-HHHH
Confidence 35778899 999999999999999983 34555431 2234556778999988 899999999832 233332 3333
Q ss_pred hccCCCcEEEEcCCC-ccccHHHHHHHHHhCCee
Q 021388 219 DALGPKGVLINIGRG-PHVDERELVSALVEGRLG 251 (313)
Q Consensus 219 ~~mk~ga~lIn~~rg-~~vd~~al~~al~~~~l~ 251 (313)
+ .+... +|..+.| +..+.+.+.++.++..+.
T Consensus 92 ~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 92 D-AGIEL-IVVITEHIPVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp H-TTCSE-EEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred H-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 3 22222 3444444 334567889988887765
No 276
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.64 E-value=0.0017 Score=59.94 Aligned_cols=89 Identities=17% Similarity=0.191 Sum_probs=59.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc--------c-------ccCCCHHHHhhcCCEEEEecCCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK--------Y-------KYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~--------~-------~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
.++|+|||.|.||.++|..|...|+ +|..+|+..+...+ . ....+..+.+++||+|+++.+..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p 84 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGAN 84 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccC
Confidence 5789999999999999999988787 79999987642211 0 11122346789999999997532
Q ss_pred --hh-hhc-cc--C----H---HHHhccCCCcEEEEcCC
Q 021388 207 --EE-TRH-II--N----R---EVIDALGPKGVLINIGR 232 (313)
Q Consensus 207 --~~-t~~-li--~----~---~~l~~mk~ga~lIn~~r 232 (313)
+. ++. ++ | + +.+....|++++++++.
T Consensus 85 ~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 85 QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 11 111 11 1 1 22334468999999984
No 277
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.62 E-value=0.0025 Score=58.72 Aligned_cols=62 Identities=13% Similarity=0.154 Sum_probs=48.4
Q ss_pred CCCEEEEEcCChHHH-HHHHHHHhC-CCCEE-EecCCCCCccccccCCCHHHHhhc---CCEEEEecCC
Q 021388 143 TGKTVGIIGLGRIGM-AVAKRAEAF-SCPIN-YYSRTEKPNLKYKYYPSVVELASN---CHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG~G~iG~-~iA~~l~~~-G~~V~-~~~~~~~~~~~~~~~~~l~e~~~~---aDvV~~~lp~ 205 (313)
.-.+|||||+|.||+ ..++.++.. +++|. ++|++++. .+...+.++++++++ .|+|++++|.
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~-~g~~~~~~~~~ll~~~~~vD~V~i~tp~ 91 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV-EGVNSYTTIEAMLDAEPSIDAVSLCMPP 91 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC-TTSEEESSHHHHHHHCTTCCEEEECSCH
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh-cCCCccCCHHHHHhCCCCCCEEEEeCCc
Confidence 345899999999998 788888875 67754 67877653 345567899999875 8999999994
No 278
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.62 E-value=0.0031 Score=54.43 Aligned_cols=68 Identities=13% Similarity=0.095 Sum_probs=49.9
Q ss_pred ccccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cc-c-----cCCCHHHHhhcCCEEEEecCCC
Q 021388 139 TTKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KY-K-----YYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 139 ~~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~-~-----~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
...+.|++|.|.|. |.||+.+++.|...|++|.+.+|++.... +. . ...++.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 34689999999997 99999999999999999999998865321 11 1 1145677888999998887643
No 279
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.61 E-value=0.0026 Score=59.65 Aligned_cols=61 Identities=23% Similarity=0.398 Sum_probs=46.9
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc--c--c---cC---CCHHHHhhcCCEEEE
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK--Y--K---YY---PSVVELASNCHILVV 201 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~--~--~---~~---~~l~e~~~~aDvV~~ 201 (313)
.+.+++|+|+|.|.+|+.+++.++.+|++|+++|+.+..... + . .. ..+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 468999999999999999999999999999999987653221 0 0 11 225667888998754
No 280
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.61 E-value=0.0085 Score=57.42 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=70.8
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCC---Ccccc----------------------------ccCCC
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEK---PNLKY----------------------------KYYPS 188 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~---~~~~~----------------------------~~~~~ 188 (313)
.++.|+++.|=|+|++|..+|+.|...|++|++.+.+.. .+.|. ... +
T Consensus 231 ~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~-~ 309 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYL-E 309 (450)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEE-E
T ss_pred CCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEe-c
Confidence 468999999999999999999999999999876542211 00000 000 0
Q ss_pred HHH-HhhcCCEEEEecCCChhhhcccCHHHHhccCCC--cEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 189 VVE-LASNCHILVVACPLTEETRHIINREVIDALGPK--GVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 189 l~e-~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~g--a~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
-++ +-..||+.+-|. +.+.|+.+....++.+ .++++.+.+.+. .++ .+.|.+..+.
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t-~eA-~~iL~~rGIl 368 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTT-IEA-TELFQQAGVL 368 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBC-HHH-HHHHHHTTCE
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCC-HHH-HHHHHHCCCE
Confidence 111 224699887664 4567888888888754 578888888754 333 3667777776
No 281
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.60 E-value=0.015 Score=53.49 Aligned_cols=162 Identities=9% Similarity=0.096 Sum_probs=100.2
Q ss_pred CceEEEEeCC-CCC--------CHHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHH
Q 021388 45 NIRAVVGNAT-AGA--------DAELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAV 115 (313)
Q Consensus 45 ~~~~i~~~~~-~~~--------~~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~ 115 (313)
+.+++..... ..+ +..++.++. -.|.....+-..+. ..+.-.+|+|.|.-+...-++ .+|+=++.+
T Consensus 84 Gg~~i~l~~~~ss~~kgEsl~DTarvLs~~~--D~iviR~~~~~~~~-~lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti 158 (325)
T 1vlv_A 84 GGHPIFLSPNDIHLGAKESLEDTARVLGRMV--DAIMFRGYKQETVE-KLAEYSGVPVYNGLTDEFHPT--QALADLMTI 158 (325)
T ss_dssp TCEEEEECTTTCCTTTSSCHHHHHHHHHTTC--SEEEEESSCHHHHH-HHHHHHCSCEEESCCSSCCHH--HHHHHHHHH
T ss_pred CCeEEEECCccccCCCCcCHHHHHHHHHHhC--CEEEEECCChHHHH-HHHHhCCCCEEeCCCCCCCcH--HHHHHHHHH
Confidence 6677776421 111 134566664 35555544322221 223345899999755432222 122222333
Q ss_pred HhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCC--hHHHHHHHHHHhCCCCEEEecCCCCCcc------------
Q 021388 116 LRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLG--RIGMAVAKRAEAFSCPINYYSRTEKPNL------------ 181 (313)
Q Consensus 116 ~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G--~iG~~iA~~l~~~G~~V~~~~~~~~~~~------------ 181 (313)
.+++ | .+.|.+|+++|=| ++.++++..+..+|++|.+..|..-...
T Consensus 159 ~e~~-------------------g-~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~ 218 (325)
T 1vlv_A 159 EENF-------------------G-RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVK 218 (325)
T ss_dssp HHHH-------------------S-CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHH
T ss_pred HHHh-------------------C-CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHH
Confidence 3221 1 3789999999986 9999999999999999999887432111
Q ss_pred --c--cccCCCHHHHhhcCCEEEEecCCC-------hh-----hhcccCHHHHhcc-CCCcEEEEcC
Q 021388 182 --K--YKYYPSVVELASNCHILVVACPLT-------EE-----TRHIINREVIDAL-GPKGVLINIG 231 (313)
Q Consensus 182 --~--~~~~~~l~e~~~~aDvV~~~lp~~-------~~-----t~~li~~~~l~~m-k~ga~lIn~~ 231 (313)
| .....++++.++++|+|..-.-.. ++ ...-++++.++.+ |++++|.-+.
T Consensus 219 ~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~L 285 (325)
T 1vlv_A 219 ETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCL 285 (325)
T ss_dssp HHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred HcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCC
Confidence 1 223578999999999998854310 10 1245688899989 9999988876
No 282
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=96.59 E-value=0.0082 Score=56.63 Aligned_cols=90 Identities=16% Similarity=0.152 Sum_probs=65.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhc---
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDA--- 220 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~--- 220 (313)
-.++-|+|.|.+|+++++.++.+|++|.++|+++..... +-+..+|-++...| .+.+..
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~~--------~~fp~a~~~~~~~p----------~~~~~~~~~ 265 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATT--------ARFPTADEVVVDWP----------HRYLAAQAE 265 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSCT--------TTCSSSSEEEESCH----------HHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhccc--------ccCCCceEEEeCCh----------HHHHHhhcc
Confidence 458999999999999999999999999999987652211 12345664444433 112222
Q ss_pred ---cCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 221 ---LGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 221 ---mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+.+++.+|=+.++.-.|...|..+|+.+...
T Consensus 266 ~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~ 299 (386)
T 2we8_A 266 AGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIA 299 (386)
T ss_dssp HTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCS
T ss_pred ccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCC
Confidence 6678888888899888999999999887444
No 283
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.58 E-value=0.0045 Score=56.50 Aligned_cols=63 Identities=14% Similarity=0.211 Sum_probs=48.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCCE-EEecCCCCCcc------ccccCCCHHHHh----------hcCCEEEEecCCC
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCPI-NYYSRTEKPNL------KYKYYPSVVELA----------SNCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~V-~~~~~~~~~~~------~~~~~~~l~e~~----------~~aDvV~~~lp~~ 206 (313)
.++||||+ |.||+..++.++..+.++ .++|++++... +...+.++++++ .+.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 58999999 789999999999888875 47788765421 123457888887 5799999999954
Q ss_pred h
Q 021388 207 E 207 (313)
Q Consensus 207 ~ 207 (313)
.
T Consensus 84 ~ 84 (312)
T 3o9z_A 84 L 84 (312)
T ss_dssp G
T ss_pred h
Confidence 3
No 284
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.56 E-value=0.0059 Score=55.53 Aligned_cols=103 Identities=20% Similarity=0.204 Sum_probs=66.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCC-EEEecCCC--CCccccccCCCHHHHhh--c-CCEEEEecCCChhhhcccCHHH
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCP-INYYSRTE--KPNLKYKYYPSVVELAS--N-CHILVVACPLTEETRHIINREV 217 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~-V~~~~~~~--~~~~~~~~~~~l~e~~~--~-aDvV~~~lp~~~~t~~li~~~~ 217 (313)
.++.|+|. |++|+.+++.+...|++ |...++.. ....+...+.+++++.. . .|++++++|.. .+...+ ++.
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~-~~~~~v-~ea 91 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAP-FAPDAV-YEA 91 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGG-GHHHHH-HHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHH-HHHHHH-HHH
Confidence 35777798 99999999999988998 34556543 22235556788999887 5 99999999832 333333 333
Q ss_pred HhccCCCcEEEEcCCC-ccccHHHHHHHHHhCCee
Q 021388 218 IDALGPKGVLINIGRG-PHVDERELVSALVEGRLG 251 (313)
Q Consensus 218 l~~mk~ga~lIn~~rg-~~vd~~al~~al~~~~l~ 251 (313)
.+ ..... +|..+.| +..+.+.+.++.++..+.
T Consensus 92 ~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 92 VD-AGIRL-VVVITEGIPVHDTMRFVNYARQKGAT 124 (297)
T ss_dssp HH-TTCSE-EEECCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 33 22222 3444444 224567888888887765
No 285
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.52 E-value=0.0045 Score=52.88 Aligned_cols=62 Identities=18% Similarity=0.184 Sum_probs=47.2
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcc----cc-------ccCCCHHHHhhcCCEEEEecCCC
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNL----KY-------KYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----~~-------~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
++|.|.| .|.+|+.+++.|...|++|.+.+|++.... +. ....++.++++.+|+|+.+....
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 6899999 599999999999999999999999865422 11 11224567888999998877543
No 286
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.52 E-value=0.0064 Score=58.38 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=71.7
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCC---------ccccccC--CCHHHHhhc-CCEEEEecCCChh
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKP---------NLKYKYY--PSVVELASN-CHILVVACPLTEE 208 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~---------~~~~~~~--~~l~e~~~~-aDvV~~~lp~~~~ 208 (313)
++.|++|.|||+|..|.++|+.|+..|++|.++|..... ..+.... ...++++.. +|+|+..-...++
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 478999999999999999999999999999999986531 1122111 123345566 8998876322222
Q ss_pred hh----------cccCH-HHHhccCCCcEE-EEcCCCccccHHHHHHHHHhCCe
Q 021388 209 TR----------HIINR-EVIDALGPKGVL-INIGRGPHVDERELVSALVEGRL 250 (313)
Q Consensus 209 t~----------~li~~-~~l~~mk~ga~l-In~~rg~~vd~~al~~al~~~~l 250 (313)
+. .++.+ +++..+.+..++ |--+.|+.....-+...|+....
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~ 139 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQ 139 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTC
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence 11 13333 344444444544 55556888888878888876554
No 287
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.50 E-value=0.0028 Score=59.59 Aligned_cols=63 Identities=17% Similarity=0.232 Sum_probs=48.5
Q ss_pred CEEEEEcCC-hHHHHHHHHHHhC-CCCEE-EecCCCCCc------cccccCCCHHHHhhc--CCEEEEecCCCh
Q 021388 145 KTVGIIGLG-RIGMAVAKRAEAF-SCPIN-YYSRTEKPN------LKYKYYPSVVELASN--CHILVVACPLTE 207 (313)
Q Consensus 145 ~~igiiG~G-~iG~~iA~~l~~~-G~~V~-~~~~~~~~~------~~~~~~~~l~e~~~~--aDvV~~~lp~~~ 207 (313)
.+|||||+| .||+..++.+... ++++. ++|++++.. .+...+.++++++++ .|+|++++|...
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~ 76 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQF 76 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHH
Confidence 479999999 9999999999875 56654 678876532 134456799999875 999999999543
No 288
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.50 E-value=0.013 Score=53.38 Aligned_cols=91 Identities=15% Similarity=0.200 Sum_probs=67.1
Q ss_pred ccCCCEEEEEcCC---hHHHHHHHHHHhCCCCEEEecCCCCCcc--ccccCCCHHHHhhcCCEEEEecCCCh--------
Q 021388 141 KFTGKTVGIIGLG---RIGMAVAKRAEAFSCPINYYSRTEKPNL--KYKYYPSVVELASNCHILVVACPLTE-------- 207 (313)
Q Consensus 141 ~l~g~~igiiG~G---~iG~~iA~~l~~~G~~V~~~~~~~~~~~--~~~~~~~l~e~~~~aDvV~~~lp~~~-------- 207 (313)
.+.|.+|+++|=| ++.++++..+..+|++|.+..|..-... ......+++|.++++|+|..-.-..+
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~d~~eav~~aDvvyt~~~q~er~~~~~~~ 223 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAVSQ 223 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEECCHHHHHHHCSEEEECCCCTTTCCSSCCS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccCCHHHHhCCCCEEEeccchhhccccchhH
Confidence 3789999999975 6999999999999999998876432211 11234689999999999987432111
Q ss_pred ---hhhcccCHHHHhccCCCcEEEEcC
Q 021388 208 ---ETRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 208 ---~t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
....-++.+.++.+|++++|.-+.
T Consensus 224 ~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 224 EGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp TTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred HHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 112346888888899999988876
No 289
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.49 E-value=0.0021 Score=62.29 Aligned_cols=110 Identities=6% Similarity=0.054 Sum_probs=71.0
Q ss_pred CCEEEEEcCChH-HHHHHHHHHhC-----CCCEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEE
Q 021388 144 GKTVGIIGLGRI-GMAVAKRAEAF-----SCPINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILV 200 (313)
Q Consensus 144 g~~igiiG~G~i-G~~iA~~l~~~-----G~~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~ 200 (313)
.++|+|||.|.. |.++|..|... +.+|..||+.++...+ .....++++.++.||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 459999999998 66677666554 5579999997752110 112357888999999999
Q ss_pred EecCCChh---hh----------------------------cccC--HHHHhccCCCcEEEEcCCCccccHHHHHHHHHh
Q 021388 201 VACPLTEE---TR----------------------------HIIN--REVIDALGPKGVLINIGRGPHVDERELVSALVE 247 (313)
Q Consensus 201 ~~lp~~~~---t~----------------------------~li~--~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~ 247 (313)
+++|.... ++ .++. .+.+....|+++++|++-.--+-+.++.+....
T Consensus 108 iaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p~ 187 (472)
T 1u8x_X 108 AHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN 187 (472)
T ss_dssp ECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHSTT
T ss_pred EcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCCC
Confidence 99986321 11 0110 123344568999999987665555555555444
Q ss_pred CCeeEE
Q 021388 248 GRLGGA 253 (313)
Q Consensus 248 ~~l~ga 253 (313)
.++.|.
T Consensus 188 ~rViG~ 193 (472)
T 1u8x_X 188 SKILNI 193 (472)
T ss_dssp CCEEEC
T ss_pred CCEEEe
Confidence 466654
No 290
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.49 E-value=0.0028 Score=58.12 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc--------c-------ccCCCHHHHhhcCCEEEEecCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK--------Y-------KYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~--------~-------~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
..++|+|||.|.+|.+++..+...|. +|..+|..++...+ . ....+..+.++.||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 34699999999999999999987675 79999987532111 0 0111345678999999999864
Q ss_pred Chh---hh--------cccC--HHHHhccCCCcEEEEcCCCccccHH--HHHHH--HHhCCeeEE
Q 021388 206 TEE---TR--------HIIN--REVIDALGPKGVLINIGRGPHVDER--ELVSA--LVEGRLGGA 253 (313)
Q Consensus 206 ~~~---t~--------~li~--~~~l~~mk~ga~lIn~~rg~~vd~~--al~~a--l~~~~l~ga 253 (313)
... ++ .++. .+.+....|++++++++ ..+|.- .+.+. +...++.|.
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHhCCCHHHEEec
Confidence 321 11 1110 12233347899999976 444443 33333 333366665
No 291
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.49 E-value=0.0046 Score=60.01 Aligned_cols=101 Identities=19% Similarity=0.234 Sum_probs=66.9
Q ss_pred CCEEEEEcC----ChHHHHHHHHHHhC--CCCE-EEecCCCCCc------ccc---ccCCCHHHHhh--cCCEEEEecCC
Q 021388 144 GKTVGIIGL----GRIGMAVAKRAEAF--SCPI-NYYSRTEKPN------LKY---KYYPSVVELAS--NCHILVVACPL 205 (313)
Q Consensus 144 g~~igiiG~----G~iG~~iA~~l~~~--G~~V-~~~~~~~~~~------~~~---~~~~~l~e~~~--~aDvV~~~lp~ 205 (313)
-.+|||||+ |.||+..++.++.. +++| .++|++++.. .+. ..+.+++++++ +.|+|++++|.
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~ 118 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKV 118 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCH
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCc
Confidence 358999999 99999999999876 6775 4788876532 122 25678999986 68999999994
Q ss_pred ChhhhcccCHHHHhccCCC-------cEEEEc-CCCccccHHHHHHHHHhCC
Q 021388 206 TEETRHIINREVIDALGPK-------GVLINI-GRGPHVDERELVSALVEGR 249 (313)
Q Consensus 206 ~~~t~~li~~~~l~~mk~g-------a~lIn~-~rg~~vd~~al~~al~~~~ 249 (313)
..+.. + ....++.| .+++.- ..-.+-+.++|+++.++..
T Consensus 119 ~~H~~--~---~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g 165 (479)
T 2nvw_A 119 PEHYE--V---VKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRA 165 (479)
T ss_dssp HHHHH--H---HHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCT
T ss_pred HHHHH--H---HHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcC
Confidence 43322 1 22233444 466664 2233455566777776655
No 292
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.48 E-value=0.005 Score=56.34 Aligned_cols=63 Identities=11% Similarity=0.202 Sum_probs=48.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCCE-EEecCCCCCcc------ccccCCCHHHHh-----------hcCCEEEEecCC
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCPI-NYYSRTEKPNL------KYKYYPSVVELA-----------SNCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~V-~~~~~~~~~~~------~~~~~~~l~e~~-----------~~aDvV~~~lp~ 205 (313)
.++||||+ |.||+..++.++..|.++ .++|++++... +...+.++++++ .+.|+|++++|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 58999999 789999999999888875 46787765421 123456888876 569999999995
Q ss_pred Ch
Q 021388 206 TE 207 (313)
Q Consensus 206 ~~ 207 (313)
..
T Consensus 84 ~~ 85 (318)
T 3oa2_A 84 YL 85 (318)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 293
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.46 E-value=0.0068 Score=51.27 Aligned_cols=88 Identities=18% Similarity=0.261 Sum_probs=58.3
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcc----ccc-----cC-CCHHHHhhcCCEEEEecCCChhhhc--
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNL----KYK-----YY-PSVVELASNCHILVVACPLTEETRH-- 211 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----~~~-----~~-~~l~e~~~~aDvV~~~lp~~~~t~~-- 211 (313)
++|.|.| .|.||+.+++.|...|++|.+.+|++.... +.. .. .+. +.+..+|+|+.+.........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~~~~ 79 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL-SDLSDQNVVVDAYGISPDEAEKH 79 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH-HHHTTCSEEEECCCSSTTTTTSH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh-hhhcCCCEEEECCcCCccccchH
Confidence 4789999 599999999999999999999999865321 111 00 112 678899999988865432211
Q ss_pred -ccCHHHHhccCC--CcEEEEcCCC
Q 021388 212 -IINREVIDALGP--KGVLINIGRG 233 (313)
Q Consensus 212 -li~~~~l~~mk~--ga~lIn~~rg 233 (313)
.....++..|+. ...+|.+|..
T Consensus 80 ~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 80 VTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp HHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCceEEEEecc
Confidence 112445566654 3567777654
No 294
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.44 E-value=0.0056 Score=57.68 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=49.4
Q ss_pred CCEEEEEcCCh---HHHHHHHHHHhCC-CCEE--EecCCCCCc------ccc---ccCCCHHHHhhc-------CCEEEE
Q 021388 144 GKTVGIIGLGR---IGMAVAKRAEAFS-CPIN--YYSRTEKPN------LKY---KYYPSVVELASN-------CHILVV 201 (313)
Q Consensus 144 g~~igiiG~G~---iG~~iA~~l~~~G-~~V~--~~~~~~~~~------~~~---~~~~~l~e~~~~-------aDvV~~ 201 (313)
-.+|||||+|. ||+..+..++..+ +++. ++|++++.. .+. ..+.++++++++ .|+|++
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i 91 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSI 91 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEE
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEE
Confidence 35899999999 9999988887655 6765 578876532 233 456799999875 999999
Q ss_pred ecCCChh
Q 021388 202 ACPLTEE 208 (313)
Q Consensus 202 ~lp~~~~ 208 (313)
++|...+
T Consensus 92 ~tp~~~H 98 (398)
T 3dty_A 92 ATPNGTH 98 (398)
T ss_dssp ESCGGGH
T ss_pred CCCcHHH
Confidence 9995543
No 295
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.44 E-value=0.005 Score=54.54 Aligned_cols=88 Identities=17% Similarity=0.231 Sum_probs=59.2
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCC-------------ccc-----------------c--cc-
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKP-------------NLK-----------------Y--KY- 185 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~-------------~~~-----------------~--~~- 185 (313)
..|.+++|.|+|+|.+|..+++.|...|. ++.++|...-. ..+ . ..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 35899999999999999999999999998 57777654210 000 0 00
Q ss_pred ---C--CCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcC
Q 021388 186 ---Y--PSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 186 ---~--~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
. .+++++++++|+|+.++. +..++..+++..... +.-+|+.+
T Consensus 104 ~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~~ 150 (251)
T 1zud_1 104 QQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITAS 150 (251)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred eccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEEe
Confidence 0 134567788999988876 566777776655442 33355543
No 296
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.44 E-value=0.042 Score=52.27 Aligned_cols=150 Identities=17% Similarity=0.192 Sum_probs=89.6
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCCCEE-EecCCCC--C--------------ccc----c-ccCCCHHHH-hhcC
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRTEK--P--------------NLK----Y-KYYPSVVEL-ASNC 196 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~~~--~--------------~~~----~-~~~~~l~e~-~~~a 196 (313)
.++.|+++.|-|+|++|+..|+.|...|++|+ +.|.+.. . ..+ + ....+-+++ -.+|
T Consensus 217 ~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~~ 296 (424)
T 3k92_A 217 IKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKDC 296 (424)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSCC
T ss_pred CCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceeccc
Confidence 45899999999999999999999999999975 4554421 0 001 0 011234454 3579
Q ss_pred CEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCC-CC--cccCCCc
Q 021388 197 HILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHV-PE--ELFGLEN 273 (313)
Q Consensus 197 DvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~-~~--~L~~~pn 273 (313)
|+++-|.. .+.|+.+....+ .-.+++-.+.+.+ .. +..+.|.+..+. ++=|..-+---. .+ ++.+ |
T Consensus 297 DIliPcA~-----~n~I~~~~a~~l-~ak~V~EgAN~p~-t~-eA~~iL~~rGI~-~~PD~~aNAGGV~vS~~E~~q--n 365 (424)
T 3k92_A 297 DILVPAAI-----SNQITAKNAHNI-QASIVVERANGPT-TI-DATKILNERGVL-LVPDILASAGGVTVSYFEWVQ--N 365 (424)
T ss_dssp SEEEECSC-----SSCBCTTTGGGC-CCSEEECCSSSCB-CH-HHHHHHHHTTCE-EECHHHHTTHHHHHHHHHHHH--H
T ss_pred cEEeecCc-----ccccChhhHhhc-CceEEEcCCCCCC-CH-HHHHHHHHCCCE-EECchHhcCCCEEeehhHHHh--c
Confidence 99876653 456788777777 3677788888885 33 445778887776 333322110000 00 1100 0
Q ss_pred eEEccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 021388 274 VVLMPHVGSGTVETRKTMADLVLGNLEAHF 303 (313)
Q Consensus 274 v~lTPH~a~~t~~~~~~~~~~~~~nl~~~~ 303 (313)
..+..+..++..+++.+.+.+.+.+.+
T Consensus 366 ---~~~~~w~~eeV~~~l~~~m~~~~~~v~ 392 (424)
T 3k92_A 366 ---NQGYYWSEEEVAEKLRSVMVSSFETIY 392 (424)
T ss_dssp ---HHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 023445556666666666666665544
No 297
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.42 E-value=0.012 Score=54.43 Aligned_cols=160 Identities=11% Similarity=0.059 Sum_probs=101.6
Q ss_pred CceEEEEeCC-CCC--------CHHHHhhCCCccEEEEcCcCCCcCChhh-hhhcCcEEEcCCCCCh---HHHHHHHHHH
Q 021388 45 NIRAVVGNAT-AGA--------DAELIDALPKLEIVSSFSVGLDKVDMVK-CKEKGVRVTNTPDVLT---DDVADLAIGL 111 (313)
Q Consensus 45 ~~~~i~~~~~-~~~--------~~~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~---~~vAE~al~~ 111 (313)
+.+++..... ..+ +..++.++. -.|...+.+ +=.+.. +.-.+|+|.|.-+... .+.|+.
T Consensus 71 Gg~~i~l~~~~ss~~kgEsl~DTarvLs~~~--D~IviR~~~--~~~~~~lA~~s~vPVINa~~~~~HPtQ~LaDl---- 142 (335)
T 1dxh_A 71 GANVTYIDPNSSQIGHKESMKDTARVLGRMY--DAIEYRGFK--QEIVEELAKFAGVPVFNGLTDEYHPTQMLADV---- 142 (335)
T ss_dssp TCEEEEECTTTCCBTTTBCHHHHHHHHHHHC--SEEEEECSC--HHHHHHHHHHSSSCEEEEECSSCCHHHHHHHH----
T ss_pred CCeEEEECCccccCcCCCcHHHHHHHHHhhC--CEEEEecCC--hhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHH----
Confidence 6777776421 111 234555653 355555433 222333 3345899999755433 333333
Q ss_pred HHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCC--hHHHHHHHHHHhCCCCEEEecCCCCCcc--------
Q 021388 112 MLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLG--RIGMAVAKRAEAFSCPINYYSRTEKPNL-------- 181 (313)
Q Consensus 112 ~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G--~iG~~iA~~l~~~G~~V~~~~~~~~~~~-------- 181 (313)
+.+.+++ |..+.|.+|+++|=| +++++++..+..+|++|.+..|..-...
T Consensus 143 -~Ti~e~~-------------------g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~ 202 (335)
T 1dxh_A 143 -LTMREHS-------------------DKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCK 202 (335)
T ss_dssp -HHHHHTC-------------------SSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHH
T ss_pred -HHHHHHc-------------------CCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHH
Confidence 3332211 214789999999996 9999999999999999998887542111
Q ss_pred ------c--cccCCCHHHHhhcCCEEEEecCC--------Chh-----hhcccCHHHHhcc-CCCcEEEEcCC
Q 021388 182 ------K--YKYYPSVVELASNCHILVVACPL--------TEE-----TRHIINREVIDAL-GPKGVLINIGR 232 (313)
Q Consensus 182 ------~--~~~~~~l~e~~~~aDvV~~~lp~--------~~~-----t~~li~~~~l~~m-k~ga~lIn~~r 232 (313)
| .....++++.++++|+|..-.-. ..+ ...-++.+.++.+ ||+++|.-+.-
T Consensus 203 ~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (335)
T 1dxh_A 203 KFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLP 275 (335)
T ss_dssp HHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECSC
T ss_pred HHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCCC
Confidence 1 22357899999999999885431 011 1245688999999 99999988764
No 298
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.41 E-value=0.0037 Score=57.45 Aligned_cols=107 Identities=15% Similarity=0.189 Sum_probs=65.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc--------------cccCCCHHHHhhcCCEEEEecCCChh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK--------------YKYYPSVVELASNCHILVVACPLTEE 208 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~--------------~~~~~~l~e~~~~aDvV~~~lp~~~~ 208 (313)
++|+|||.|.+|.+++..+...+. ++..+|+..+...+ .....+..+.++.||+|+++.+....
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~~ 85 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQK 85 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 699999999999999999987676 79999986542211 00112345678999999999864321
Q ss_pred h---h--------cccC--HHHHhccCCCcEEEEcCCCccccH--HHHHHH--HHhCCeeEE
Q 021388 209 T---R--------HIIN--REVIDALGPKGVLINIGRGPHVDE--RELVSA--LVEGRLGGA 253 (313)
Q Consensus 209 t---~--------~li~--~~~l~~mk~ga~lIn~~rg~~vd~--~al~~a--l~~~~l~ga 253 (313)
- + .++. .+.+....|++++++++ +.+|. ..+.+. +...++.|.
T Consensus 86 ~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 86 PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA--NPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp -------CHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC--CcHHHHHHHHHHHcCCCHHHEEec
Confidence 1 0 1110 12233347899999984 44444 333333 333366655
No 299
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.41 E-value=0.023 Score=52.49 Aligned_cols=90 Identities=8% Similarity=0.050 Sum_probs=67.2
Q ss_pred cCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc--------------c--cccCCCHHHHhhcCCEEEEecC
Q 021388 142 FTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL--------------K--YKYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 142 l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~e~~~~aDvV~~~lp 204 (313)
+.|.+|+++|= +++.++++..+..+|++|.+..|..-... + .....+++|.++++|+|..-.-
T Consensus 177 l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 177 FKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVW 256 (340)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCc
Confidence 78999999986 57889999999999999998877542211 1 2235689999999999987553
Q ss_pred CCh------h-----hhcccCHHHHhccCCCcEEEEcC
Q 021388 205 LTE------E-----TRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 205 ~~~------~-----t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
... + ...-++.+.++.+|++++|.-+.
T Consensus 257 ~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 257 MSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCL 294 (340)
T ss_dssp ------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred cCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCC
Confidence 221 0 12356889999999999998887
No 300
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.40 E-value=0.0045 Score=57.65 Aligned_cols=86 Identities=23% Similarity=0.325 Sum_probs=62.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCC------cccccc---CCC---HHHHhhcCCEEEEecCCChhhh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKP------NLKYKY---YPS---VVELASNCHILVVACPLTEETR 210 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~------~~~~~~---~~~---l~e~~~~aDvV~~~lp~~~~t~ 210 (313)
.|++|.|+|.|.+|..+++.++.+|++|++.++++++ ..++.. ..+ +.++....|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 6889999999999999999999999999999877643 222211 112 22334468999888864321
Q ss_pred cccCHHHHhccCCCcEEEEcCCC
Q 021388 211 HIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg 233 (313)
-+..+..|+++..+|+++..
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCCC
T ss_pred ---HHHHHHHHhcCCEEEEEccC
Confidence 25567888888899888753
No 301
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.39 E-value=0.0067 Score=55.89 Aligned_cols=101 Identities=16% Similarity=0.099 Sum_probs=62.9
Q ss_pred CEEEEEcCC-hHHHHHHHHHHhC--CCCE-EEecCCCCCcc------cc-ccCCCHHHHhh--cCCEEEEecCCChhhhc
Q 021388 145 KTVGIIGLG-RIGMAVAKRAEAF--SCPI-NYYSRTEKPNL------KY-KYYPSVVELAS--NCHILVVACPLTEETRH 211 (313)
Q Consensus 145 ~~igiiG~G-~iG~~iA~~l~~~--G~~V-~~~~~~~~~~~------~~-~~~~~l~e~~~--~aDvV~~~lp~~~~t~~ 211 (313)
.+|||||+| .+|+..++.++.. ++++ .++|++++... +. ..+.+++++++ +.|+|++++|...+..
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~- 97 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELNLP- 97 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGHHH-
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHHHH-
Confidence 489999999 8999999999876 4665 57888765321 22 34678999986 5899999999543322
Q ss_pred ccCHHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCe
Q 021388 212 IINREVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRL 250 (313)
Q Consensus 212 li~~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l 250 (313)
+ ....++.|. +++.-- --++-+.++|.++.++.++
T Consensus 98 -~---~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~ 134 (340)
T 1zh8_A 98 -F---IEKALRKGVHVICEKPISTDVETGKKVVELSEKSEK 134 (340)
T ss_dssp -H---HHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSS
T ss_pred -H---HHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 1 222333443 334311 1233444556665555443
No 302
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.38 E-value=0.015 Score=55.68 Aligned_cols=87 Identities=9% Similarity=0.191 Sum_probs=64.9
Q ss_pred cCCCEEEEEcCC----------hHHHHHHHHHHhC-CCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhh
Q 021388 142 FTGKTVGIIGLG----------RIGMAVAKRAEAF-SCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETR 210 (313)
Q Consensus 142 l~g~~igiiG~G----------~iG~~iA~~l~~~-G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~ 210 (313)
+.|++|+|+|+. .-...+++.|... |++|.+|||..... ....++++.++.+|+|++++...+ -+
T Consensus 313 ~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~---~~~~~~~~~~~~ad~vvi~t~~~~-f~ 388 (431)
T 3ojo_A 313 LSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD---FVEHDMSHAVKDASLVLILSDHSE-FK 388 (431)
T ss_dssp SSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT---TBCSTTHHHHTTCSEEEECSCCGG-GT
T ss_pred cCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc---cccCCHHHHHhCCCEEEEecCCHH-Hh
Confidence 589999999985 3578899999999 99999999976543 234678899999999999987543 22
Q ss_pred cccCHHHHhccCCCcEEEEcCCCcc
Q 021388 211 HIINREVIDALGPKGVLINIGRGPH 235 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg~~ 235 (313)
. ++-+.+..|+ +.+++|+ |+-+
T Consensus 389 ~-~d~~~~~~~~-~~~i~D~-r~~~ 410 (431)
T 3ojo_A 389 N-LSDSHFDKMK-HKVIFDT-KNVV 410 (431)
T ss_dssp S-CCGGGGTTCS-SCEEEES-SCCC
T ss_pred c-cCHHHHHhCC-CCEEEEC-CCCC
Confidence 2 3334446676 6788985 5433
No 303
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.38 E-value=0.0037 Score=57.40 Aligned_cols=97 Identities=16% Similarity=0.247 Sum_probs=62.4
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCC--CCccc---------------ccc-CCCHHHHhhcCCEEEEe
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTE--KPNLK---------------YKY-YPSVVELASNCHILVVA 202 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~--~~~~~---------------~~~-~~~l~e~~~~aDvV~~~ 202 (313)
...++|+|||.|.||..+|..+...|+ +|..+|+.+ ....+ ... ..+-.+.+++||+|+++
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia 85 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT 85 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence 356799999999999999999998899 999999983 21111 000 11224678999999999
Q ss_pred cCCC--hh-hh-ccc--C----H---HHHhccCCCcEEEEcCCCccccHHH
Q 021388 203 CPLT--EE-TR-HII--N----R---EVIDALGPKGVLINIGRGPHVDERE 240 (313)
Q Consensus 203 lp~~--~~-t~-~li--~----~---~~l~~mk~ga~lIn~~rg~~vd~~a 240 (313)
.... |. ++ .++ | + +.+....|++++++++. .+|.-.
T Consensus 86 ag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN--Pvd~~t 134 (315)
T 3tl2_A 86 AGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN--PVDAMT 134 (315)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC--hHHHHH
Confidence 7422 21 11 111 1 1 12333468999999984 344433
No 304
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.37 E-value=0.0077 Score=54.10 Aligned_cols=83 Identities=19% Similarity=0.161 Sum_probs=55.5
Q ss_pred CEEEEEc-CChHHHHHHHHHHh-CCCCEEE-ecCCCCCc------------cccccCCCHHHHhhcCCEEEEecCCChh-
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEA-FSCPINY-YSRTEKPN------------LKYKYYPSVVELASNCHILVVACPLTEE- 208 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~-~G~~V~~-~~~~~~~~------------~~~~~~~~l~e~~~~aDvV~~~lp~~~~- 208 (313)
.+|+|+| +|.||+.+++.+.. -++++.+ +|++.... .+.....++++++.++|+|+-+.+ |+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~--p~a 85 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL--PEG 85 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC--HHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC--HHH
Confidence 5899999 99999999998874 4677654 78764321 123345789999999999998875 33
Q ss_pred hhcccCHHHHhccCCCcEEEEcCCC
Q 021388 209 TRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 209 t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
+... ....++.|.-+|-...|
T Consensus 86 ~~~~----~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 86 TLVH----LDAALRHDVKLVIGTTG 106 (272)
T ss_dssp HHHH----HHHHHHHTCEEEECCCC
T ss_pred HHHH----HHHHHHcCCCEEEECCC
Confidence 2222 22224455556655555
No 305
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.36 E-value=0.0043 Score=57.66 Aligned_cols=66 Identities=17% Similarity=0.165 Sum_probs=46.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhC--------CCCE-EEecCCCCCcc------cc-ccCCCHHHHhh--cCCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAF--------SCPI-NYYSRTEKPNL------KY-KYYPSVVELAS--NCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~--------G~~V-~~~~~~~~~~~------~~-~~~~~l~e~~~--~aDvV~~~lp 204 (313)
+--+|||||+|.||+.-++.++.. +++| .++|++++... +. ..+.+++++++ +.|+|++++|
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP 103 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP 103 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC
Confidence 345899999999999877766542 4565 46788776432 22 34678999986 4799999999
Q ss_pred CChh
Q 021388 205 LTEE 208 (313)
Q Consensus 205 ~~~~ 208 (313)
..-+
T Consensus 104 ~~~H 107 (393)
T 4fb5_A 104 NQFH 107 (393)
T ss_dssp GGGH
T ss_pred hHHH
Confidence 5443
No 306
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.34 E-value=0.0096 Score=50.66 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=46.8
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCccc---c-------cc-CCCHHHHhhcCCEEEEecCCC
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNLK---Y-------KY-YPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~---~-------~~-~~~l~e~~~~aDvV~~~lp~~ 206 (313)
++|.|.| .|.||+.+++.|...|++|.+.+|+...... . .. ..++.++++.+|+|+.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence 4788998 8999999999999999999999988654221 1 11 223556778899998887644
No 307
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.33 E-value=0.0046 Score=56.99 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=65.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc-------c-------ccCCCHHHHhhcCCEEEEecCCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK-------Y-------KYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~-------~-------~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
..++|+|||.|.+|.+++..+...+. ++..+|+..+...+ . ....+..+.++.||+|+++.+..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 34799999999999999999987665 79999986542211 0 01123456799999999998643
Q ss_pred hhh---h--------cccC--HHHHhccCCCcEEEEcCCCccccHHH--HHHH--HHhCCeeEE
Q 021388 207 EET---R--------HIIN--REVIDALGPKGVLINIGRGPHVDERE--LVSA--LVEGRLGGA 253 (313)
Q Consensus 207 ~~t---~--------~li~--~~~l~~mk~ga~lIn~~rg~~vd~~a--l~~a--l~~~~l~ga 253 (313)
..- + .++. .+.+....|++++++++ +.+|.-. +.+. +...++.|.
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC--CcHHHHHHHHHHHcCCCHHHEEEc
Confidence 211 0 1110 11222336899999984 4444433 3232 233356555
No 308
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.33 E-value=0.0029 Score=58.30 Aligned_cols=63 Identities=19% Similarity=0.287 Sum_probs=46.3
Q ss_pred CEEEEEcCChHHHH-HHHHHHhC-CCCEE-EecCCCCCcc------cc-ccCCCHHHHhhc--CCEEEEecCCCh
Q 021388 145 KTVGIIGLGRIGMA-VAKRAEAF-SCPIN-YYSRTEKPNL------KY-KYYPSVVELASN--CHILVVACPLTE 207 (313)
Q Consensus 145 ~~igiiG~G~iG~~-iA~~l~~~-G~~V~-~~~~~~~~~~------~~-~~~~~l~e~~~~--aDvV~~~lp~~~ 207 (313)
.++||||+|.||+. .+..++.. +++|. ++|++++... +. ..+.++++++++ .|+|++++|...
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~ 98 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQ 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCch
Confidence 38999999999986 56677655 67765 6788765322 22 346799999854 799999999543
No 309
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.30 E-value=0.016 Score=52.42 Aligned_cols=105 Identities=10% Similarity=0.096 Sum_probs=74.8
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCC--CccccccCCCHHHHhhcCCEEEEecCCCh----------hh
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEK--PNLKYKYYPSVVELASNCHILVVACPLTE----------ET 209 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~--~~~~~~~~~~l~e~~~~aDvV~~~lp~~~----------~t 209 (313)
+.|++|.++|.........+.|...|++|.+...... ...+.....++.+.++++|+|+...|... .+
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCSS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCcccccccccC
Confidence 6788999999999999999999999999987643221 11233334456777889999886444321 12
Q ss_pred hcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 210 RHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
...++++.++.++++.+++ ++ +|..++.+++.+.++.
T Consensus 85 ~~~~~~~~l~~~~~l~~i~-~g----~~~~d~~~~~~~~gi~ 121 (300)
T 2rir_A 85 EVVLKQDHLDRTPAHCVIF-SG----ISNAYLENIAAQAKRK 121 (300)
T ss_dssp CEECCHHHHHTSCTTCEEE-ES----SCCHHHHHHHHHTTCC
T ss_pred CccchHHHHhhcCCCCEEE-Ee----cCCHHHHHHHHHCCCE
Confidence 3336788999999988877 33 3777877777777776
No 310
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.29 E-value=0.0088 Score=56.78 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=63.4
Q ss_pred CCEEEEEcCCh---HHHHHHHHHHhCC-CCEE--EecCCCCCcc------cc---ccCCCHHHHhhc-------CCEEEE
Q 021388 144 GKTVGIIGLGR---IGMAVAKRAEAFS-CPIN--YYSRTEKPNL------KY---KYYPSVVELASN-------CHILVV 201 (313)
Q Consensus 144 g~~igiiG~G~---iG~~iA~~l~~~G-~~V~--~~~~~~~~~~------~~---~~~~~l~e~~~~-------aDvV~~ 201 (313)
-.+|||||+|. ||+..+..++..+ +++. ++|++++... +. ..+.++++++++ .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35899999999 9999888887665 6765 5788765321 23 356799999876 999999
Q ss_pred ecCCChhhhcccCHHHHhccCCCc-EEEEcC-CCccccHHHHHHHHHhCCee
Q 021388 202 ACPLTEETRHIINREVIDALGPKG-VLINIG-RGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 202 ~lp~~~~t~~li~~~~l~~mk~ga-~lIn~~-rg~~vd~~al~~al~~~~l~ 251 (313)
++|...+.. -....++.|. +++.-- --++-+.++|+++.++.++.
T Consensus 117 ~tp~~~H~~-----~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 163 (417)
T 3v5n_A 117 VTPNHVHYA-----AAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDAL 163 (417)
T ss_dssp CSCTTSHHH-----HHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSC
T ss_pred CCCcHHHHH-----HHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCE
Confidence 999654422 1223344443 333311 22334455555555554443
No 311
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.28 E-value=0.016 Score=52.79 Aligned_cols=145 Identities=12% Similarity=0.143 Sum_probs=93.3
Q ss_pred HHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcC-CCCCh---HHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC
Q 021388 60 ELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNT-PDVLT---DDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD 135 (313)
Q Consensus 60 ~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~-~~~~~---~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~ 135 (313)
.++.++.+ .|......-..+. ..+...+|+|.|. -|... .+.++. +.+.+++
T Consensus 89 rvls~~~D--~iviR~~~~~~~~-~la~~~~vPVINaG~g~~~HPtQ~LaDl-----~Ti~e~~---------------- 144 (299)
T 1pg5_A 89 RMLNNYSD--GIVMRHKYDGASR-FASEISDIPVINAGDGKHEHPTQAVIDI-----YTINKHF---------------- 144 (299)
T ss_dssp HHHHHHCS--EEEEEESSBTHHH-HHHHHCSSCEEEEEETTTBCHHHHHHHH-----HHHHHHH----------------
T ss_pred HHHHHhCC--EEEEeCCChhHHH-HHHHhCCCCEEeCCCCCCcCcHHHHHHH-----HHHHHHh----------------
Confidence 45555543 4444443333221 2234457999998 44443 444443 3332221
Q ss_pred cccccccCCCEEEEEcC---ChHHHHHHHHHHhC-CCCEEEecCCCCCc-------ccc--ccCCCHHHHhhcCCEEEEe
Q 021388 136 YKLTTKFTGKTVGIIGL---GRIGMAVAKRAEAF-SCPINYYSRTEKPN-------LKY--KYYPSVVELASNCHILVVA 202 (313)
Q Consensus 136 ~~~~~~l~g~~igiiG~---G~iG~~iA~~l~~~-G~~V~~~~~~~~~~-------~~~--~~~~~l~e~~~~aDvV~~~ 202 (313)
| .+.|.+|+++|= |++.++++..+..+ |++|.+..|..-.. .|. ....++++.++++|+|..-
T Consensus 145 ---g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~ 220 (299)
T 1pg5_A 145 ---N-TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVT 220 (299)
T ss_dssp ---S-CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEE
T ss_pred ---C-CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeC
Confidence 1 378999999998 59999999999999 99999887743211 122 2346899999999999887
Q ss_pred cCCChh-------h----hcccCHHHHhccCCCcEEEEcCC
Q 021388 203 CPLTEE-------T----RHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 203 lp~~~~-------t----~~li~~~~l~~mk~ga~lIn~~r 232 (313)
.-..+. . ..-++++.++.+|++++|.-+.-
T Consensus 221 ~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP 261 (299)
T 1pg5_A 221 RIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLP 261 (299)
T ss_dssp CCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSC
T ss_pred CcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCCC
Confidence 643311 0 24568888888888888887753
No 312
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.28 E-value=0.0043 Score=57.37 Aligned_cols=99 Identities=17% Similarity=0.119 Sum_probs=64.8
Q ss_pred CEEEEEcCChHHHHHHHHHHhC---------CCCE-EEecCCCCCcccc---ccCCCHHHHhhcCCEEEEecCCChhhhc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF---------SCPI-NYYSRTEKPNLKY---KYYPSVVELASNCHILVVACPLTEETRH 211 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~---------G~~V-~~~~~~~~~~~~~---~~~~~l~e~~~~aDvV~~~lp~~~~t~~ 211 (313)
.+|||||+|.||+.+++.+... +++| .++|++..+..+. ....++++++ +.|+|+.|+|.......
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~~ 82 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVEAPLR 82 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcHHHHH
Confidence 3799999999999999998765 4565 4667765543322 2355777888 99999999985532221
Q ss_pred ccCHHHHhccCCCcEEEEcCCCcc-ccHHHHHHHHHhC
Q 021388 212 IINREVIDALGPKGVLINIGRGPH-VDERELVSALVEG 248 (313)
Q Consensus 212 li~~~~l~~mk~ga~lIn~~rg~~-vd~~al~~al~~~ 248 (313)
. ....|+.|.-+|...-..+ -..+.|.++.++.
T Consensus 83 ~----~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 83 L----VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H----HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H----HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 1 2335566666665432222 3557777777776
No 313
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.26 E-value=0.065 Score=50.99 Aligned_cols=105 Identities=15% Similarity=0.192 Sum_probs=65.6
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCCEE-EecCCCC-------Cccccc--------------------cCCCHH
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRTEK-------PNLKYK--------------------YYPSVV 190 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~~~-------~~~~~~--------------------~~~~l~ 190 (313)
+.++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.+++ .+.|.. ...+.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 346889999999999999999999999999998 4555521 000100 001122
Q ss_pred HH-hhcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 191 EL-ASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 191 e~-~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
++ -..||+++-|.. .+.|+.+....+ ...+++-.+.+.+. .+ -.+.|+++.+.
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t-~e-a~~il~~~GI~ 340 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT-PE-GDKVLTERGIN 340 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC-HH-HHHHHHHHTCE
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC-HH-HHHHHHHCCCE
Confidence 32 246898877653 456888888888 46788888888864 33 34556666665
No 314
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.25 E-value=0.0058 Score=54.23 Aligned_cols=62 Identities=19% Similarity=0.247 Sum_probs=46.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-cc-------ccCCCHHHHhhc-CCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-KY-------KYYPSVVELASN-CHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-~~-------~~~~~l~e~~~~-aDvV~~~lp 204 (313)
.+++|.|.|.|.||+.+++.|...|++|.+.+|+..... +. ....+++++++. +|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 357899999999999999999999999999998765321 11 112234556666 999977653
No 315
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.23 E-value=0.036 Score=50.61 Aligned_cols=91 Identities=10% Similarity=0.158 Sum_probs=66.2
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCc--------cc--cccCCCHHHHhhcCCEEEEec----CC
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPN--------LK--YKYYPSVVELASNCHILVVAC----PL 205 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~--------~~--~~~~~~l~e~~~~aDvV~~~l----p~ 205 (313)
.+.|.+|+++|= +++.++++..+..+|++|.+..|..-.. .+ .....+++|.++++|+|..-. ..
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~ 230 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGF 230 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC-----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcc
Confidence 378999999985 5788999999999999999887643211 11 223578999999999998743 10
Q ss_pred Ch--------hhhcccCHHHHhccCCCcEEEEcC
Q 021388 206 TE--------ETRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 206 ~~--------~t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
.. -...-++.+.++.+|++++|.-+.
T Consensus 231 e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 231 EAENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp -------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred hhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 00 012456888999999999988876
No 316
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.23 E-value=0.0032 Score=57.58 Aligned_cols=85 Identities=18% Similarity=0.228 Sum_probs=56.4
Q ss_pred EEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc-----------------cccCCCHHHHhhcCCEEEEecCCCh
Q 021388 146 TVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK-----------------YKYYPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 146 ~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~-----------------~~~~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
+|+|||.|.||.++|..+...|+ +|..+|+..+...+ .....+. +.+++||+|+++.+...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 58999999999999999986677 69999988653211 0111344 67899999999975432
Q ss_pred h-----------hhcccCHHH---HhccCCCcEEEEcCC
Q 021388 208 E-----------TRHIINREV---IDALGPKGVLINIGR 232 (313)
Q Consensus 208 ~-----------t~~li~~~~---l~~mk~ga~lIn~~r 232 (313)
. +..++ .+. +....|++++|+++.
T Consensus 80 k~G~~r~dl~~~n~~i~-~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 80 KPGMTREQLLEANANTM-ADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CSSCCTHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCcHHHHHHHHHHHH-HHHHHHHHHHCCCeEEEEeCC
Confidence 1 11111 112 223358999999854
No 317
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.20 E-value=0.012 Score=54.29 Aligned_cols=149 Identities=10% Similarity=0.053 Sum_probs=94.6
Q ss_pred HHHhhCCCccEEEEcCcCCCcCChhh-hhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCccc
Q 021388 60 ELIDALPKLEIVSSFSVGLDKVDMVK-CKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKL 138 (313)
Q Consensus 60 ~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~ 138 (313)
.++.++. -.|...+.+-.. +.. +.-.+|+|.|.-+...-++ .+|+=++.+.+++ .
T Consensus 94 rvLs~~~--D~IviR~~~~~~--~~~lA~~~~vPVINa~~~~~HPt--Q~LaDl~Ti~e~~------------------~ 149 (333)
T 1duv_G 94 RVLGRMY--DGIQYRGYGQEI--VETLAEYASVPVWNGLTNEFHPT--QLLADLLTMQEHL------------------P 149 (333)
T ss_dssp HHHTTTC--SEEEEECSCHHH--HHHHHHHHSSCEEESCCSSCCHH--HHHHHHHHHHHHS------------------T
T ss_pred HHHHHhC--CEEEEEcCCchH--HHHHHHhCCCCeEcCCCCCCCch--HHHHHHHHHHHHh------------------c
Confidence 4555553 355555433222 323 3345899999765443222 1222223333321 0
Q ss_pred ccccCCCEEEEEcCC--hHHHHHHHHHHhCCCCEEEecCCCCCcc--------------c--cccCCCHHHHhhcCCEEE
Q 021388 139 TTKFTGKTVGIIGLG--RIGMAVAKRAEAFSCPINYYSRTEKPNL--------------K--YKYYPSVVELASNCHILV 200 (313)
Q Consensus 139 ~~~l~g~~igiiG~G--~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~e~~~~aDvV~ 200 (313)
|..+.|.+|+++|=| +++++++..+..+|++|.+..|..-... | .....++++.++++|+|.
T Consensus 150 g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvy 229 (333)
T 1duv_G 150 GKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIY 229 (333)
T ss_dssp TCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEE
T ss_pred CCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEE
Confidence 214789999999986 9999999999999999998887432111 1 223578999999999998
Q ss_pred EecCCC-----h--h------hhcccCHHHHhcc-CCCcEEEEcCC
Q 021388 201 VACPLT-----E--E------TRHIINREVIDAL-GPKGVLINIGR 232 (313)
Q Consensus 201 ~~lp~~-----~--~------t~~li~~~~l~~m-k~ga~lIn~~r 232 (313)
.-.-.. + . ...-++.+.++.+ ||+++|.-+.-
T Consensus 230 td~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcLP 275 (333)
T 1duv_G 230 TDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLP 275 (333)
T ss_dssp ECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECSC
T ss_pred eCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCCC
Confidence 854311 0 0 1245688999999 99999988764
No 318
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.20 E-value=0.0066 Score=56.07 Aligned_cols=106 Identities=12% Similarity=0.073 Sum_probs=67.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhC--------CCCE-EEecCCCCCccc---------------c-ccCC---CHHHHh-hc
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF--------SCPI-NYYSRTEKPNLK---------------Y-KYYP---SVVELA-SN 195 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~--------G~~V-~~~~~~~~~~~~---------------~-~~~~---~l~e~~-~~ 195 (313)
.+|||||+|.||+.+++.+... +++| .++|++...... . .... ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 4799999999999999998753 3565 466776542211 1 1233 788877 36
Q ss_pred CCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCcc-ccHHHHHHHHHhCCee
Q 021388 196 CHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPH-VDERELVSALVEGRLG 251 (313)
Q Consensus 196 aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~-vd~~al~~al~~~~l~ 251 (313)
.|+|+.++|.. .+.+.--+-....|+.|.-+|...-..+ .+.+.|.++.++.+..
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~ 142 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRR 142 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCE
Confidence 89999999964 1111111234556777877776544333 3446777777666554
No 319
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.20 E-value=0.0088 Score=57.19 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=65.8
Q ss_pred CEEEEEcC----ChHHHHHHHHHHhC--CCCE-EEecCCCCCc------cccc---cCCCHHHHhh--cCCEEEEecCCC
Q 021388 145 KTVGIIGL----GRIGMAVAKRAEAF--SCPI-NYYSRTEKPN------LKYK---YYPSVVELAS--NCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG~----G~iG~~iA~~l~~~--G~~V-~~~~~~~~~~------~~~~---~~~~l~e~~~--~aDvV~~~lp~~ 206 (313)
.+|||||+ |.||+..++.++.. ++++ .++|++++.. .+.. .+.+++++++ +.|+|++++|..
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCcH
Confidence 58999999 99999999999886 6775 5788876532 1222 4678999986 689999999944
Q ss_pred hhhhcccCHHHHhccCCC-------cEEEEc-CCCccccHHHHHHHHHhCCee
Q 021388 207 EETRHIINREVIDALGPK-------GVLINI-GRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~g-------a~lIn~-~rg~~vd~~al~~al~~~~l~ 251 (313)
.+... ....++.| .+++.- .--++-+.++|+++.++.++.
T Consensus 101 ~H~~~-----~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~ 148 (438)
T 3btv_A 101 SHYEV-----VMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQ 148 (438)
T ss_dssp HHHHH-----HHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCE
T ss_pred HHHHH-----HHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCe
Confidence 33221 12223333 455552 223344556666666655543
No 320
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.20 E-value=0.068 Score=51.07 Aligned_cols=104 Identities=17% Similarity=0.185 Sum_probs=70.3
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCCCEE-EecCCCC--Cccc------------------c--ccCCCHHHHh-hc
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRTEK--PNLK------------------Y--KYYPSVVELA-SN 195 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~~~--~~~~------------------~--~~~~~l~e~~-~~ 195 (313)
.++.|++|+|.|+|++|+.+|+.|...|.+|+ +.|.+.. .+.| + ....+.++++ ..
T Consensus 231 ~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~~ 310 (440)
T 3aog_A 231 LQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGLP 310 (440)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTCC
T ss_pred CCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcCC
Confidence 46899999999999999999999999999988 4454311 0000 0 0112345554 47
Q ss_pred CCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 196 CHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 196 aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
||+++-|.. .+.++.+....+ ...+++-.+.+.+. .++ .+.|.+..+.
T Consensus 311 ~DIlvPcA~-----~n~i~~~na~~l-~ak~VvEgAN~p~t-~eA-~~iL~~~GI~ 358 (440)
T 3aog_A 311 VEFLVPAAL-----EKQITEQNAWRI-RARIVAEGANGPTT-PAA-DDILLEKGVL 358 (440)
T ss_dssp CSEEEECSS-----SSCBCTTTGGGC-CCSEEECCSSSCBC-HHH-HHHHHHHTCE
T ss_pred CcEEEecCC-----cCccchhhHHHc-CCcEEEecCccccC-HHH-HHHHHHCCCE
Confidence 999988764 345677777777 36777888888764 443 4566666665
No 321
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.15 E-value=0.019 Score=52.42 Aligned_cols=36 Identities=28% Similarity=0.204 Sum_probs=31.0
Q ss_pred cCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCC
Q 021388 142 FTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTE 177 (313)
Q Consensus 142 l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~ 177 (313)
...++|.|.|. |.+|+.+++.|...|++|.+.+|+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34678999998 9999999999999999999999876
No 322
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.14 E-value=0.0099 Score=49.56 Aligned_cols=63 Identities=14% Similarity=0.137 Sum_probs=47.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccc-------cCCCHHHHhhcCCEEEEecCCC
Q 021388 144 GKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYK-------YYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 144 g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~-------~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
+++|.|.|. |.+|+.+++.|...|++|.+.+|++.... ... ...++.++++.+|+|+.+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 478999997 99999999999999999999998765321 111 1124566788999998887643
No 323
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.14 E-value=0.011 Score=50.10 Aligned_cols=88 Identities=13% Similarity=0.091 Sum_probs=57.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc------CCCHHHHhhcCCEEEEecCCC--h---
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY------YPSVVELASNCHILVVACPLT--E--- 207 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~------~~~l~e~~~~aDvV~~~lp~~--~--- 207 (313)
++|.|.|. |.||+.+++.|...|++|.+.+|++.... +... ..+. +.+..+|+|+.+.... +
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~~~~~~~ 79 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVPWGSGRG 79 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCCTTSSCT
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-hhcccCCEEEECCccCCCcchh
Confidence 46889987 99999999999999999999998764311 1110 0112 6788999998887542 1
Q ss_pred hhhcccCHHHHhccCC-CcEEEEcCCC
Q 021388 208 ETRHIINREVIDALGP-KGVLINIGRG 233 (313)
Q Consensus 208 ~t~~li~~~~l~~mk~-ga~lIn~~rg 233 (313)
...-.....++..|+. |..+|++|..
T Consensus 80 ~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 80 YLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred hHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 1111112445566643 4677877653
No 324
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.14 E-value=0.038 Score=50.69 Aligned_cols=91 Identities=11% Similarity=0.128 Sum_probs=66.9
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc--------------c--cccCCCHHHHhhcCCEEEEec
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL--------------K--YKYYPSVVELASNCHILVVAC 203 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~e~~~~aDvV~~~l 203 (313)
.+.|.+|+++|= +++.++.+..+..+|++|.+..|..-... + .....++++.++++|+|..-.
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 378999999986 67889999999999999998877542111 1 223568999999999998764
Q ss_pred CCChh------------hhcccCHHHHhccCCCcEEEEcC
Q 021388 204 PLTEE------------TRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 204 p~~~~------------t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
-.... ...-++.+.++.+|++++|.-+.
T Consensus 234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 32110 12346888898899999988875
No 325
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.13 E-value=0.0067 Score=56.03 Aligned_cols=63 Identities=21% Similarity=0.181 Sum_probs=45.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCcc------cc------------------ccCCCHHHHhhcCCE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPNL------KY------------------KYYPSVVELASNCHI 198 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~~------~~------------------~~~~~l~e~~~~aDv 198 (313)
.+|||+|+|.||+.+++.+... ++++. +.|++++... +. ....+.++++.+.|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 3799999999999999999865 45654 4566543210 10 223578888889999
Q ss_pred EEEecCCCh
Q 021388 199 LVVACPLTE 207 (313)
Q Consensus 199 V~~~lp~~~ 207 (313)
|+.|+|...
T Consensus 83 V~~aTp~~~ 91 (334)
T 2czc_A 83 IVDATPGGI 91 (334)
T ss_dssp EEECCSTTH
T ss_pred EEECCCccc
Confidence 999999654
No 326
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.12 E-value=0.0033 Score=59.63 Aligned_cols=111 Identities=19% Similarity=0.140 Sum_probs=67.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhCC---CCEEEecCCCCCcc------------ccc-------cCCCHHHHhhc--CCEEE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFS---CPINYYSRTEKPNL------------KYK-------YYPSVVELASN--CHILV 200 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G---~~V~~~~~~~~~~~------------~~~-------~~~~l~e~~~~--aDvV~ 200 (313)
++|+|+|.|.||+.+++.|...| .+|.+++|+.++.. ... ...++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999888 38999998764311 010 11346677777 89999
Q ss_pred EecCCChhhhcccCHHHHhccCCCcEEEEcCCCcccc--------HHHHHHHHHhCCeeEEEecCCCCCC
Q 021388 201 VACPLTEETRHIINREVIDALGPKGVLINIGRGPHVD--------ERELVSALVEGRLGGAGLDVFENEP 262 (313)
Q Consensus 201 ~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd--------~~al~~al~~~~l~ga~lDV~~~Ep 262 (313)
.++|.... ..++ + ..++.|.-++|++--...+ ..++.++.++.++. .+.-....|
T Consensus 82 n~ag~~~~-~~v~-~---a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~--~i~g~G~~P 144 (405)
T 4ina_A 82 NIALPYQD-LTIM-E---ACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVM--ALLGSGFDP 144 (405)
T ss_dssp ECSCGGGH-HHHH-H---HHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCE--EEECCBTTT
T ss_pred ECCCcccC-hHHH-H---HHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCE--EEEcCCCCc
Confidence 98873221 1111 2 2234566677764432221 13556666555554 333334444
No 327
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.11 E-value=0.0068 Score=56.02 Aligned_cols=91 Identities=15% Similarity=0.265 Sum_probs=60.4
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc----------c------ccCCCHHHHhhcCCEEEEe
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK----------Y------KYYPSVVELASNCHILVVA 202 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~----------~------~~~~~l~e~~~~aDvV~~~ 202 (313)
....++|+|||.|.||..+|..+...|. ++..+|+..+...+ + ....+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 3567899999999999999999987777 79999987542111 0 1123444 58999999998
Q ss_pred cCCC--h-hhhc-cc--C-------HHHHhccCCCcEEEEcCC
Q 021388 203 CPLT--E-ETRH-II--N-------REVIDALGPKGVLINIGR 232 (313)
Q Consensus 203 lp~~--~-~t~~-li--~-------~~~l~~mk~ga~lIn~~r 232 (313)
.... | .++. ++ | .+.+....|++++++++.
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 6432 1 1221 22 1 122334578999999984
No 328
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.11 E-value=0.0099 Score=54.32 Aligned_cols=145 Identities=13% Similarity=0.137 Sum_probs=91.2
Q ss_pred HHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCC-CCC---hHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCC
Q 021388 59 AELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTP-DVL---TDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKG 134 (313)
Q Consensus 59 ~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~-~~~---~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~ 134 (313)
..++.++. -.|......-..+ ...+...+|+|.|.. |.. ..+.|+. +.+.+++
T Consensus 94 arvls~~~--D~iviR~~~~~~~-~~la~~~~vPVINag~g~~~HPtQ~LaDl-----~Ti~e~~--------------- 150 (308)
T 1ml4_A 94 IKTVEQYC--DVIVIRHPKEGAA-RLAAEVAEVPVINAGDGSNQHPTQTLLDL-----YTIKKEF--------------- 150 (308)
T ss_dssp HHHHTTTC--SEEEEEESSTTHH-HHHHHTCSSCEEEEEETTSCCHHHHHHHH-----HHHHHHS---------------
T ss_pred HHHHHHhC--cEEEEecCChhHH-HHHHHhCCCCEEeCccCCccCcHHHHHHH-----HHHHHHh---------------
Confidence 35566664 3444444333222 122334579999963 232 3444443 3332211
Q ss_pred CcccccccCCCEEEEEcC---ChHHHHHHHHHHhCCCCEEEecCCCCCcc----------cc--ccCCCHHHHhhcCCEE
Q 021388 135 DYKLTTKFTGKTVGIIGL---GRIGMAVAKRAEAFSCPINYYSRTEKPNL----------KY--KYYPSVVELASNCHIL 199 (313)
Q Consensus 135 ~~~~~~~l~g~~igiiG~---G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------~~--~~~~~l~e~~~~aDvV 199 (313)
| .+.|.+|+++|= |++.++++..+..+|++|.+..|..-... +. ....++++.++++|+|
T Consensus 151 ----g-~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvv 225 (308)
T 1ml4_A 151 ----G-RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVL 225 (308)
T ss_dssp ----S-CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEE
T ss_pred ----C-CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEE
Confidence 1 378999999998 48999999999999999998887443211 22 2346899999999999
Q ss_pred EEecCCCh------hh-----hcccCHHHHhccCCCcEEEEcC
Q 021388 200 VVACPLTE------ET-----RHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 200 ~~~lp~~~------~t-----~~li~~~~l~~mk~ga~lIn~~ 231 (313)
..-.-..+ +- ..-++++.++.+|++++|.-+.
T Consensus 226 yt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 226 YVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp EECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred EECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 87553211 10 2345777888888888887765
No 329
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.09 E-value=0.017 Score=52.22 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=55.7
Q ss_pred CEEEEEc-CChHHHHHHHHHH-hCCCCEE-EecCCCCC-------------ccccccCCCHHHHhhcCCEEEEecCCChh
Q 021388 145 KTVGIIG-LGRIGMAVAKRAE-AFSCPIN-YYSRTEKP-------------NLKYKYYPSVVELASNCHILVVACPLTEE 208 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~-~~G~~V~-~~~~~~~~-------------~~~~~~~~~l~e~~~~aDvV~~~lp~~~~ 208 (313)
.+|+|+| +|+||+.+++.+. .-++++. ++|++... ..+.....++++++.++|+|+-..+ |+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~--p~ 99 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ--PQ 99 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC--HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC--HH
Confidence 4899999 9999999999987 4577754 66876432 1123345789999999999987764 32
Q ss_pred hhcccCHHHHhccCCCcEEEEcCCC
Q 021388 209 TRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 209 t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
.. . +.....++.|.-+|-...|
T Consensus 100 a~--~-~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 100 AS--V-LYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp HH--H-HHHHHHHHHTCEEEECCCC
T ss_pred HH--H-HHHHHHHHcCCCEEEECCC
Confidence 21 1 1122234456666655566
No 330
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=96.05 E-value=0.012 Score=55.07 Aligned_cols=137 Identities=13% Similarity=0.161 Sum_probs=81.9
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhc--cC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDA--LG 222 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~--mk 222 (313)
.++.|+|.|.+|+++++.++.+|++|.++|+++..... +-+..+|-++..-| .+.+.. +.
T Consensus 200 ~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~~--------~~fp~a~~v~~~~p----------~~~~~~~~~~ 261 (362)
T 3on5_A 200 ERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEK--------HFFPDADEIIVDFP----------ADFLRKFLIR 261 (362)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGCG--------GGCTTCSEEEESCH----------HHHHHHSCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcccccc--------ccCCCceEEecCCH----------HHHHhhcCCC
Confidence 47999999999999999999999999999987653211 12344565443333 222333 55
Q ss_pred CCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCCCCCccc----CCCceEEcc---CCCCCcHHHHHHHHHHH
Q 021388 223 PKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPHVPEELF----GLENVVLMP---HVGSGTVETRKTMADLV 295 (313)
Q Consensus 223 ~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~----~~pnv~lTP---H~a~~t~~~~~~~~~~~ 295 (313)
+++.+|=+.++.-.|...|.++|+. ...+.++ ..+.-- ...|+ ...+ +-+| -+++.|++ .++--+
T Consensus 262 ~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG~--iGSr~R-~~rl~~~g~~~~r-i~~PIGL~Iga~tP~---EIAvSI 333 (362)
T 3on5_A 262 PDDFVLIMTHHFQKDQEILHFLLEK-ELRYIGI--LGSKER-TRRLLQNRKPPDH-LYSPVGLSIDAQGPE---EIAISI 333 (362)
T ss_dssp TTCEEEECCSCHHHHHHHHHHHSSS-CCSEEEE--SSCHHH-HHHHHTSCCCCTT-EESSCSCCSCCCSHH---HHHHHH
T ss_pred CCeEEEEEeCCchhhHHHHHHHhcC-CCCEEEE--eCCHHH-HHHHHhcCCcHhh-eECCCCCCCCCCCHH---HHHHHH
Confidence 6777777778877888888777766 3433332 100000 00000 0112 4455 46777874 455555
Q ss_pred HHHHHHHHcCCC
Q 021388 296 LGNLEAHFLNKP 307 (313)
Q Consensus 296 ~~nl~~~~~g~~ 307 (313)
+..|.+..+|++
T Consensus 334 ~AEiia~~~~~~ 345 (362)
T 3on5_A 334 VAQLIQLIRSRK 345 (362)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHhCCC
Confidence 666666666653
No 331
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.04 E-value=0.024 Score=51.85 Aligned_cols=91 Identities=11% Similarity=0.149 Sum_probs=66.0
Q ss_pred ccCCCEEEEEcC---ChHHHHHHHHHHhC-CCCEEEecCCCCCcc----------cc--ccCCCHHHHhhcCCEEEEecC
Q 021388 141 KFTGKTVGIIGL---GRIGMAVAKRAEAF-SCPINYYSRTEKPNL----------KY--KYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 141 ~l~g~~igiiG~---G~iG~~iA~~l~~~-G~~V~~~~~~~~~~~----------~~--~~~~~l~e~~~~aDvV~~~lp 204 (313)
.+.|.+|+++|= |++.++++..+..+ |++|.+..|..-... |. ....+++|.++++|+|..-.-
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 378999999998 59999999999999 999998887432111 22 234689999999999987643
Q ss_pred CCh----hh------hcccCHHHHhccCCCcEEEEcC
Q 021388 205 LTE----ET------RHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 205 ~~~----~t------~~li~~~~l~~mk~ga~lIn~~ 231 (313)
..+ .. ..-++++.++.+|++++|.-+.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 211 11 2345778888888888887775
No 332
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.02 E-value=0.0049 Score=55.43 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=34.4
Q ss_pred ccCCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 141 KFTGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 141 ~l~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.+.|+++.|+| .|.+|+.+++.|...|++|.+.+|+.+
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~ 154 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLD 154 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHH
Confidence 36789999999 999999999999999999999998753
No 333
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.02 E-value=0.022 Score=52.74 Aligned_cols=63 Identities=17% Similarity=0.278 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCC
Q 021388 101 TDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRT 176 (313)
Q Consensus 101 ~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~ 176 (313)
....||.++-+=|-+.|- ..|.... ...+++++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 4 p~~~~~~~~~lnl~lm~w----------Rll~~~g---~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 4 PLKIADQSVDLNLKLMKW----------RILPDLN---LDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHHHHHHHHHHHHHHHH----------HTCTTCC---HHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHH----------hhcchhh---HHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 345677776665555431 1232111 135899999999999999999999999998 47777753
No 334
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.01 E-value=0.0062 Score=56.35 Aligned_cols=92 Identities=17% Similarity=0.186 Sum_probs=59.2
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCc--------cccc----c-C---CCHHHHhhcCCEEEEecCC
Q 021388 143 TGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPN--------LKYK----Y-Y---PSVVELASNCHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~--------~~~~----~-~---~~l~e~~~~aDvV~~~lp~ 205 (313)
.+++|.|.| .|.+|+.+++.|...|++|.+.+|+.... .+.. . . .++.++++.+|+|+.+...
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 367899998 59999999999999999999998876532 0111 1 1 2356678899999876643
Q ss_pred ChhhhcccCHHHHhccCC-C--cEEEEcCCCc
Q 021388 206 TEETRHIINREVIDALGP-K--GVLINIGRGP 234 (313)
Q Consensus 206 ~~~t~~li~~~~l~~mk~-g--a~lIn~~rg~ 234 (313)
.....+......+..++. | ..||++|...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 211111222444444432 3 4788887754
No 335
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.00 E-value=0.015 Score=55.92 Aligned_cols=110 Identities=10% Similarity=0.049 Sum_probs=70.9
Q ss_pred CCEEEEEcCChH-HHHHHHHHHh----C-CCCEEEecCCC--CCcc-------------c----cccCCCHHHHhhcCCE
Q 021388 144 GKTVGIIGLGRI-GMAVAKRAEA----F-SCPINYYSRTE--KPNL-------------K----YKYYPSVVELASNCHI 198 (313)
Q Consensus 144 g~~igiiG~G~i-G~~iA~~l~~----~-G~~V~~~~~~~--~~~~-------------~----~~~~~~l~e~~~~aDv 198 (313)
.++|+|||.|.. |.+++..|.. + +.+|..||+.+ +... + .....++.+.++.||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 358999999999 8887766654 2 55799999987 4211 0 1123577889999999
Q ss_pred EEEecCCChh---hh--------c--------------------ccC--HHHHhccCCCcEEEEcCCCccccHHHHHHHH
Q 021388 199 LVVACPLTEE---TR--------H--------------------IIN--REVIDALGPKGVLINIGRGPHVDERELVSAL 245 (313)
Q Consensus 199 V~~~lp~~~~---t~--------~--------------------li~--~~~l~~mk~ga~lIn~~rg~~vd~~al~~al 245 (313)
|++++|.... ++ + ++. .+.+....|+++++|.+-.--+-+.++.+..
T Consensus 87 VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~~k~~ 166 (450)
T 1s6y_A 87 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYT 166 (450)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHC
T ss_pred EEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhC
Confidence 9999985321 11 0 110 1233445689999999877655556665554
Q ss_pred HhCCeeEE
Q 021388 246 VEGRLGGA 253 (313)
Q Consensus 246 ~~~~l~ga 253 (313)
...++.|.
T Consensus 167 p~~rViG~ 174 (450)
T 1s6y_A 167 KQEKVVGL 174 (450)
T ss_dssp CCCCEEEC
T ss_pred CCCCEEEe
Confidence 33355554
No 336
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.99 E-value=0.1 Score=49.65 Aligned_cols=104 Identities=15% Similarity=0.153 Sum_probs=70.8
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCCCEE-EecCCCC--Cccc---------------cc-cCCCHHHH-hhcCCEE
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRTEK--PNLK---------------YK-YYPSVVEL-ASNCHIL 199 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~~~--~~~~---------------~~-~~~~l~e~-~~~aDvV 199 (313)
.++.|+++.|.|+|++|+.+|+.|...|++|+ +.|.+.. .+.| .. +..+-+++ -..||++
T Consensus 214 ~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DVl 293 (419)
T 3aoe_E 214 LDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEVL 293 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSEE
T ss_pred CCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceEE
Confidence 46899999999999999999999999999988 5555211 0000 00 00111232 3479998
Q ss_pred EEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 200 VVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 200 ~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+-|. +.+.++.+....++ -.+++..+.+.+. .++ .+.|.+..+.
T Consensus 294 iP~A-----~~n~i~~~~A~~l~-ak~V~EgAN~p~t-~~A-~~~L~~~Gi~ 337 (419)
T 3aoe_E 294 VLAA-----REGALDGDRARQVQ-AQAVVEVANFGLN-PEA-EAYLLGKGAL 337 (419)
T ss_dssp EECS-----CTTCBCHHHHTTCC-CSEEEECSTTCBC-HHH-HHHHHHHTCE
T ss_pred Eecc-----cccccccchHhhCC-ceEEEECCCCcCC-HHH-HHHHHHCCCE
Confidence 8775 34567888888884 4688899988864 444 4667777666
No 337
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=95.96 E-value=0.024 Score=54.66 Aligned_cols=90 Identities=11% Similarity=0.145 Sum_probs=65.2
Q ss_pred cCCCEEEEEcCCh----------HHHHHHHHHHhCCCCEEEecCCCCCcc------------------ccccCCCHHHHh
Q 021388 142 FTGKTVGIIGLGR----------IGMAVAKRAEAFSCPINYYSRTEKPNL------------------KYKYYPSVVELA 193 (313)
Q Consensus 142 l~g~~igiiG~G~----------iG~~iA~~l~~~G~~V~~~~~~~~~~~------------------~~~~~~~l~e~~ 193 (313)
+.|++|+|+|+.- -...+++.|...|++|.+|||...... +.....+..+.+
T Consensus 327 ~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (467)
T 2q3e_A 327 VTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEAC 406 (467)
T ss_dssp CTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHHH
T ss_pred cCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHHH
Confidence 6799999999974 788999999999999999999753211 122235778889
Q ss_pred hcCCEEEEecCCChhhhcccCH-HHHhccCCCcEEEEcCCCc
Q 021388 194 SNCHILVVACPLTEETRHIINR-EVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 194 ~~aDvV~~~lp~~~~t~~li~~-~~l~~mk~ga~lIn~~rg~ 234 (313)
+.+|+|++++...+ -+. ++- .+...|+...+++|+ |+-
T Consensus 407 ~~ad~~vi~t~~~~-f~~-~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 407 DGAHAVVICTEWDM-FKE-LDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp TTCSEEEECSCCGG-GGG-SCHHHHHHHSCSSCEEEES-SCT
T ss_pred hCCcEEEEecCChh-hhc-CCHHHHHHhcCCCCEEEeC-CCc
Confidence 99999999987542 222 343 344567766668886 553
No 338
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=95.94 E-value=0.035 Score=51.80 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=92.7
Q ss_pred HHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCCh---HHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC
Q 021388 59 AELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLT---DDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD 135 (313)
Q Consensus 59 ~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~---~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~ 135 (313)
..+|.++- -.|...+.+-..+ ...+.-.+|+|.|.-+... .+.|+. +.+..++
T Consensus 120 arvLs~~~--D~IviR~~~~~~~-~~lA~~s~vPVINa~~~~~HPtQaLaDl-----~Ti~E~~---------------- 175 (365)
T 4amu_A 120 AKVLGRFY--DGIEFRGFAQSDV-DALVKYSGVPVWNGLTDDEHPTQIIADF-----MTMKEKF---------------- 175 (365)
T ss_dssp HHHHHHHC--SEEEEECSCHHHH-HHHHHHHCSCEEEEECSSCCHHHHHHHH-----HHHHHHH----------------
T ss_pred HHHHHhhC--cEEEEecCChhHH-HHHHHhCCCCEEeCCCCCCCcHHHHHHH-----HHHHHHh----------------
Confidence 34555553 3455444332222 1223446899999755432 334443 3332211
Q ss_pred cccccccCCCEEEEEcCC--hHHHHHHHHHHhCCCCEEEecCCCCCc--c--------------c--cccCCCHHHHhhc
Q 021388 136 YKLTTKFTGKTVGIIGLG--RIGMAVAKRAEAFSCPINYYSRTEKPN--L--------------K--YKYYPSVVELASN 195 (313)
Q Consensus 136 ~~~~~~l~g~~igiiG~G--~iG~~iA~~l~~~G~~V~~~~~~~~~~--~--------------~--~~~~~~l~e~~~~ 195 (313)
| .+.|++|+++|=| ++..+++..+..+|++|.+..|..-.. . + .....++++.++.
T Consensus 176 ---G-~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~ 251 (365)
T 4amu_A 176 ---G-NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQD 251 (365)
T ss_dssp ---S-SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTT
T ss_pred ---C-CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcC
Confidence 1 2889999999988 789999999999999999887743221 1 1 2235689999999
Q ss_pred CCEEEEecC--CCh--h---------hhcccCHHHHhccCCCcEEEEcCC
Q 021388 196 CHILVVACP--LTE--E---------TRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 196 aDvV~~~lp--~~~--~---------t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
+|+|..-+- ... . ...-++.+.++.+|++++|.-+.-
T Consensus 252 aDVVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcLP 301 (365)
T 4amu_A 252 ADVIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCLP 301 (365)
T ss_dssp CSEEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECSC
T ss_pred CCEEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCC
Confidence 999987431 111 1 123468889999999999988763
No 339
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.94 E-value=0.0065 Score=56.43 Aligned_cols=63 Identities=17% Similarity=0.254 Sum_probs=48.4
Q ss_pred cCCCEEEEEcC-ChHHHHHHHHHHhCCC--CEEEecCCCCCccc--------------cccCCCHHHHhhcCCEEEEecC
Q 021388 142 FTGKTVGIIGL-GRIGMAVAKRAEAFSC--PINYYSRTEKPNLK--------------YKYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 142 l~g~~igiiG~-G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~--------------~~~~~~l~e~~~~aDvV~~~lp 204 (313)
+.+++|+|||. |.+|..+|..+...|. +|..+|...++..+ .....+..+.+++||+|+++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 45789999998 9999999999988885 79999986542111 1113567788999999999863
No 340
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.93 E-value=0.024 Score=52.82 Aligned_cols=83 Identities=12% Similarity=0.211 Sum_probs=53.6
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHhCC-CCEEEecCCCCCccc-------cc-------cCCCHHHHhhcCCEEEEecCCC
Q 021388 143 TGKTVGIIG-LGRIGMAVAKRAEAFS-CPINYYSRTEKPNLK-------YK-------YYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 143 ~g~~igiiG-~G~iG~~iA~~l~~~G-~~V~~~~~~~~~~~~-------~~-------~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
...+|||+| .|.+|+.+++.|.... +++.+.......... +. ...+ ++.+..+|+|+.|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346899999 9999999999998765 466665433221100 00 0112 44557899999999854
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 207 EETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
.. .+.....+.|+.+|+.+-
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSS
T ss_pred hH------HHHHHHHhCCCEEEECCc
Confidence 32 223333367899999885
No 341
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=95.92 E-value=0.042 Score=50.60 Aligned_cols=91 Identities=10% Similarity=0.170 Sum_probs=67.3
Q ss_pred ccCCCEEEEEcCC--hHHHHHHHHHHhCCCCEEEecCCCCC--c----------------cc--cccCCCHHHHhhcCCE
Q 021388 141 KFTGKTVGIIGLG--RIGMAVAKRAEAFSCPINYYSRTEKP--N----------------LK--YKYYPSVVELASNCHI 198 (313)
Q Consensus 141 ~l~g~~igiiG~G--~iG~~iA~~l~~~G~~V~~~~~~~~~--~----------------~~--~~~~~~l~e~~~~aDv 198 (313)
.+.|.+|+++|=| ++.++++..+..+|++|.+..|..-. . .+ .....++++.++++|+
T Consensus 158 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 158 GFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp TGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred ccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 5889999999986 89999999999999999988775422 1 12 2235689999999999
Q ss_pred EEEec----CCCh-h--------hhcccCHHHHhccCCCcEEEEcC
Q 021388 199 LVVAC----PLTE-E--------TRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 199 V~~~l----p~~~-~--------t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
|..-+ ...+ . ...-++.+.++.+|++++|.-+.
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCC
Confidence 98632 2011 0 12346888999999999988876
No 342
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.90 E-value=0.022 Score=52.97 Aligned_cols=87 Identities=15% Similarity=0.212 Sum_probs=56.1
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCC------CCEEEec-CC-CCCcc--------c---ccc-CCCHHHHhhcCCEEEEec
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFS------CPINYYS-RT-EKPNL--------K---YKY-YPSVVELASNCHILVVAC 203 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G------~~V~~~~-~~-~~~~~--------~---~~~-~~~l~e~~~~aDvV~~~l 203 (313)
++|+|+| .|.+|+.+.+.|...+ .++..+. ++ ..+.. + ... ..+. +.+..+|+|++|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEA-AVLGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCH-HHHTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCH-HHhcCCCEEEECC
Confidence 6899999 9999999999998776 3666553 22 21111 0 000 1122 3356899999999
Q ss_pred CCChhhhcccCHHHHhccCCCcEEEEcCCCccccH
Q 021388 204 PLTEETRHIINREVIDALGPKGVLINIGRGPHVDE 238 (313)
Q Consensus 204 p~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~ 238 (313)
|... ..+..+.++.|..+|+.|..--.+.
T Consensus 89 g~~~------s~~~~~~~~~G~~vIDlSa~~R~~~ 117 (352)
T 2nqt_A 89 PHGH------SAVLAQQLSPETLIIDCGADFRLTD 117 (352)
T ss_dssp TTSC------CHHHHHHSCTTSEEEECSSTTTCSC
T ss_pred CCcc------hHHHHHHHhCCCEEEEECCCccCCc
Confidence 8653 3445455566899999886544433
No 343
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.88 E-value=0.011 Score=56.36 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=46.4
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc-------cccCC---CHHHHhhcCCEEEE
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK-------YKYYP---SVVELASNCHILVV 201 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~-------~~~~~---~l~e~~~~aDvV~~ 201 (313)
-+.|++|+|+|-|.+|+.+++.++.+|++|.++|+++..... ..... .+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 468999999999999999999999999999999977653211 01112 34556778998874
No 344
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.88 E-value=0.015 Score=50.08 Aligned_cols=65 Identities=14% Similarity=0.080 Sum_probs=49.7
Q ss_pred cCCCEEEEEc-CChHHHHHHHHHHhCCC--CEEEecCCCCCcc-----cc-------ccCCCHHHHhhcCCEEEEecCCC
Q 021388 142 FTGKTVGIIG-LGRIGMAVAKRAEAFSC--PINYYSRTEKPNL-----KY-------KYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 142 l~g~~igiiG-~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~-----~~-------~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
+.++++.|.| .|.||+.+++.|...|+ +|.+.+|++.... .. ....+++++++..|+|+.+....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 5678999998 69999999999999999 9999998765321 11 11234666788899998887654
No 345
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=95.88 E-value=0.0085 Score=57.50 Aligned_cols=106 Identities=12% Similarity=0.073 Sum_probs=67.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCE-EEecCCCCCcc-------c----------------------cccCCCHHHHh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPI-NYYSRTEKPNL-------K----------------------YKYYPSVVELA 193 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V-~~~~~~~~~~~-------~----------------------~~~~~~l~e~~ 193 (313)
.+|||||+|.||+.+++.+... |+++ .++|++++... + ...+.+.++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 4799999999999999888754 6665 46787765311 1 12357899998
Q ss_pred h--cCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCC-ccccHHHHHHHHHhCCeeEEE
Q 021388 194 S--NCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRG-PHVDERELVSALVEGRLGGAG 254 (313)
Q Consensus 194 ~--~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg-~~vd~~al~~al~~~~l~ga~ 254 (313)
+ +.|+|+.++|....-. +-.+..|+.|.-++...-. ...+.+.|.++.++.++....
T Consensus 104 ~d~dIDaVviaTp~p~~H~----e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~ 163 (446)
T 3upl_A 104 SNPLIDVIIDATGIPEVGA----ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSL 163 (446)
T ss_dssp TCTTCCEEEECSCCHHHHH----HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCCCEEEEcCCChHHHH----HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeee
Confidence 7 4899999998532111 2244556667666532211 123446777777776665333
No 346
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.87 E-value=0.0053 Score=53.07 Aligned_cols=60 Identities=17% Similarity=0.232 Sum_probs=43.2
Q ss_pred CEEEEEcCChHHHHHHHH--HHhCCCCEE-EecCCCCCcc----cc--ccCCCHHHHhh-cCCEEEEecCC
Q 021388 145 KTVGIIGLGRIGMAVAKR--AEAFSCPIN-YYSRTEKPNL----KY--KYYPSVVELAS-NCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~--l~~~G~~V~-~~~~~~~~~~----~~--~~~~~l~e~~~-~aDvV~~~lp~ 205 (313)
++++|||.|.+|+.+++. ... |+++. ++|.+++... +. ....+++++++ +.|+|++++|.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps 150 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPR 150 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCH
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCc
Confidence 579999999999999985 234 77755 5676655321 11 12567888876 58999999994
No 347
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.86 E-value=0.0063 Score=57.13 Aligned_cols=62 Identities=13% Similarity=0.096 Sum_probs=46.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHhC--CCCEE-EecCCCCCc------cccccCCCHHHHhhcCCEEEEecCCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAF--SCPIN-YYSRTEKPN------LKYKYYPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~--G~~V~-~~~~~~~~~------~~~~~~~~l~e~~~~aDvV~~~lp~~ 206 (313)
..+|||||+| +|+.-++.++.. ++++. ++|++.+.. .+...+.++++++.+.|++++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 3589999999 799888777665 56755 678877532 23445689999999999999999854
No 348
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.86 E-value=0.016 Score=52.41 Aligned_cols=64 Identities=11% Similarity=0.012 Sum_probs=47.6
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCc------------cc--------cccCCCHHHHhhcCCEE
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPN------------LK--------YKYYPSVVELASNCHIL 199 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~------------~~--------~~~~~~l~e~~~~aDvV 199 (313)
.+.|++|.|.|. |.||+.+++.|...|++|.+.+|+.... .. .....+++++++..|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 478899999997 9999999999999999999998864310 01 11123455677789998
Q ss_pred EEecC
Q 021388 200 VVACP 204 (313)
Q Consensus 200 ~~~lp 204 (313)
+.+..
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 77664
No 349
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=95.85 E-value=0.035 Score=51.63 Aligned_cols=163 Identities=11% Similarity=0.063 Sum_probs=101.2
Q ss_pred CceEEEEeCC-CCC--------CHHHHhhCCCccEEEEcCcCCCcCChhh-hhhcCcEEEcCCCCChHHHHHHHHHHHHH
Q 021388 45 NIRAVVGNAT-AGA--------DAELIDALPKLEIVSSFSVGLDKVDMVK-CKEKGVRVTNTPDVLTDDVADLAIGLMLA 114 (313)
Q Consensus 45 ~~~~i~~~~~-~~~--------~~~~l~~~~~Lk~i~~~~~G~d~id~~~-~~~~gI~v~n~~~~~~~~vAE~al~~~L~ 114 (313)
+.+++..... ..+ +..+|.++. -.|...+.+-.. +.. +.-.+|+|.|.-+...-++ .+|+=++.
T Consensus 93 Gg~vi~l~~~~ss~~kgEsl~DTarvLs~~~--D~IviR~~~~~~--~~~lA~~s~vPVINa~~~~~HPt--QaLaDl~T 166 (359)
T 2w37_A 93 GAHPEYLGQNDIQLGKKESTSDTAKVLGSMF--DGIEFRGFKQSD--AEILARDSGVPVWNGLTDEWHPT--QMLADFMT 166 (359)
T ss_dssp TCEEEEECTTTCCTTTSSCHHHHHHHHHHHC--SEEEEESSCHHH--HHHHHHHSSSCEEEEECSSCCHH--HHHHHHHH
T ss_pred CCeEEEeCCccccCCCCcCHHHHHHHHHHhc--CEEEEecCChHH--HHHHHHhCCCCEEcCCCCCCCcc--HHHHHHHH
Confidence 6777776421 112 234566653 355555433222 333 3345899999765433222 12222233
Q ss_pred HHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCC--hHHHHHHHHHHhCCCCEEEecCCCCCcc-----------
Q 021388 115 VLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLG--RIGMAVAKRAEAFSCPINYYSRTEKPNL----------- 181 (313)
Q Consensus 115 ~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G--~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------- 181 (313)
+.+++ | .+.|.+|+++|=| ++.++++..+..+|++|.+..|..-...
T Consensus 167 i~E~~-------------------g-~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a 226 (359)
T 2w37_A 167 VKENF-------------------G-KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFA 226 (359)
T ss_dssp HHHHH-------------------S-CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHH
T ss_pred HHHHh-------------------C-CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHH
Confidence 33221 1 3789999999986 9999999999999999998887432111
Q ss_pred ---c--cccCCCHHHHhhcCCEEEEecCC---C--hh------hhcccCHHHHhccC---CCcEEEEcCCC
Q 021388 182 ---K--YKYYPSVVELASNCHILVVACPL---T--EE------TRHIINREVIDALG---PKGVLINIGRG 233 (313)
Q Consensus 182 ---~--~~~~~~l~e~~~~aDvV~~~lp~---~--~~------t~~li~~~~l~~mk---~ga~lIn~~rg 233 (313)
| .....++++.++.+|+|..-.-. . .. ...-++.+.++.+| ++++|.-+.-.
T Consensus 227 ~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP~ 297 (359)
T 2w37_A 227 EKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLPA 297 (359)
T ss_dssp HHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSCC
T ss_pred HHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCCC
Confidence 1 22357899999999999885431 1 00 12456888888888 88888887643
No 350
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.84 E-value=0.027 Score=52.20 Aligned_cols=82 Identities=18% Similarity=0.191 Sum_probs=52.0
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCC-CCEEEecCCCCCc--cc-----c-----ccCCCHHHHhhcCCEEEEecCCChhhh
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFS-CPINYYSRTEKPN--LK-----Y-----KYYPSVVELASNCHILVVACPLTEETR 210 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G-~~V~~~~~~~~~~--~~-----~-----~~~~~l~e~~~~aDvV~~~lp~~~~t~ 210 (313)
.+|||+| .|.+|+.+.+.|.... +++.+..+..... .. + ....++++ +..+|+|+.|+|.....+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s~~ 83 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVFAR 83 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHHHH
Confidence 5899999 7999999999998664 3665544322211 00 0 01223444 478999999999654322
Q ss_pred cccCHHHHhccCCCcEEEEcCC
Q 021388 211 HIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~r 232 (313)
.. . ..++.|..+|+.+-
T Consensus 84 -~a-~---~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 84 -EF-D---RYSALAPVLVDLSA 100 (345)
T ss_dssp -TH-H---HHHTTCSEEEECSS
T ss_pred -HH-H---HHHHCCCEEEEcCc
Confidence 21 2 23467888999875
No 351
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.81 E-value=0.015 Score=54.31 Aligned_cols=63 Identities=10% Similarity=0.103 Sum_probs=45.2
Q ss_pred CEEEEEc-CChHHHH-HH----HHHHhCC-CCE----------EEecCCCCCcc------cc-ccCCCHHHHhhc--CCE
Q 021388 145 KTVGIIG-LGRIGMA-VA----KRAEAFS-CPI----------NYYSRTEKPNL------KY-KYYPSVVELASN--CHI 198 (313)
Q Consensus 145 ~~igiiG-~G~iG~~-iA----~~l~~~G-~~V----------~~~~~~~~~~~------~~-~~~~~l~e~~~~--aDv 198 (313)
.+||||| +|.||+. .+ +.++..+ ..+ .++|++++... +. ..+.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 4799999 9999998 66 6666543 222 38888776422 23 246789999876 899
Q ss_pred EEEecCCCh
Q 021388 199 LVVACPLTE 207 (313)
Q Consensus 199 V~~~lp~~~ 207 (313)
|++++|...
T Consensus 87 V~i~tp~~~ 95 (383)
T 3oqb_A 87 FFDAATTQA 95 (383)
T ss_dssp EEECSCSSS
T ss_pred EEECCCchH
Confidence 999999643
No 352
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.80 E-value=0.008 Score=54.95 Aligned_cols=88 Identities=17% Similarity=0.196 Sum_probs=56.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhCC--CCEEEecCCCCCccc--------------cccCCCHHHHhhcCCEEEEecCCChh
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFS--CPINYYSRTEKPNLK--------------YKYYPSVVELASNCHILVVACPLTEE 208 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G--~~V~~~~~~~~~~~~--------------~~~~~~l~e~~~~aDvV~~~lp~~~~ 208 (313)
++|+|||.|.+|.+++..+...+ -++..+|+..++..+ .....+..+.+++||+|+++.+....
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 48999999999999999998766 369999987542211 00111235678999999998864321
Q ss_pred ---h--------hcccC--HHHHhccCCCcEEEEcCC
Q 021388 209 ---T--------RHIIN--REVIDALGPKGVLINIGR 232 (313)
Q Consensus 209 ---t--------~~li~--~~~l~~mk~ga~lIn~~r 232 (313)
+ ..++. .+.+....|++++++++.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 0 11110 112223378999999843
No 353
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.80 E-value=0.029 Score=51.23 Aligned_cols=94 Identities=17% Similarity=0.314 Sum_probs=60.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCC--CCEEEecCCCCCcc------c-----ccc---CCCHHHHhhcCCEEEEecCCCh
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFS--CPINYYSRTEKPNL------K-----YKY---YPSVVELASNCHILVVACPLTE 207 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G--~~V~~~~~~~~~~~------~-----~~~---~~~l~e~~~~aDvV~~~lp~~~ 207 (313)
++|+|||. |.+|..++..|...| .+|..+|+.+.... . ... ..++++.++.||+|+++.....
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 47999998 999999999999777 57999998762100 0 111 1357788999999999874322
Q ss_pred h---hh-ccc--C----HH---HHhccCCCcEEEEcCCCccccHHH
Q 021388 208 E---TR-HII--N----RE---VIDALGPKGVLINIGRGPHVDERE 240 (313)
Q Consensus 208 ~---t~-~li--~----~~---~l~~mk~ga~lIn~~rg~~vd~~a 240 (313)
. ++ .++ | .+ .+....|++++|++ .+.+|.-.
T Consensus 81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~--sNPv~~~~ 124 (314)
T 1mld_A 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII--SNPVNSTI 124 (314)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC--SSCHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE--CCCcchhH
Confidence 1 11 110 1 11 22233588999997 45566554
No 354
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.79 E-value=0.014 Score=53.77 Aligned_cols=87 Identities=22% Similarity=0.362 Sum_probs=61.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc-CCCHHHHhhcCCEEEEecCCChhhhcccCHH
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY-YPSVVELASNCHILVVACPLTEETRHIINRE 216 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~-~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~ 216 (313)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++.. ++.. ..+.+++.+..|+|+-++.... .-..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~-----~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY-----DLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC-----CHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH-----HHHH
Confidence 578999999999999999999999999999988765422 2111 1223333336888888776432 1245
Q ss_pred HHhccCCCcEEEEcCCCc
Q 021388 217 VIDALGPKGVLINIGRGP 234 (313)
Q Consensus 217 ~l~~mk~ga~lIn~~rg~ 234 (313)
.+..++++..++.++...
T Consensus 251 ~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 251 YLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HHTTEEEEEEEEECCCCC
T ss_pred HHHHHhcCCEEEEECCCC
Confidence 677788888888887543
No 355
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.79 E-value=0.0047 Score=58.37 Aligned_cols=64 Identities=19% Similarity=0.203 Sum_probs=46.9
Q ss_pred CEEEEEcCChHHHHHHHHHHhC---------CCCEE-EecCCCCCcc------cc-ccCCCHHHHhh--cCCEEEEecCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF---------SCPIN-YYSRTEKPNL------KY-KYYPSVVELAS--NCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~---------G~~V~-~~~~~~~~~~------~~-~~~~~l~e~~~--~aDvV~~~lp~ 205 (313)
.+|||||+|.||+..++.++.. +.+|. ++|++++... +. ..+.+++++++ +.|+|++++|.
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 4899999999999988888754 34554 6788765321 22 34678999986 57999999995
Q ss_pred Chh
Q 021388 206 TEE 208 (313)
Q Consensus 206 ~~~ 208 (313)
..+
T Consensus 107 ~~H 109 (412)
T 4gqa_A 107 HLH 109 (412)
T ss_dssp GGH
T ss_pred HHH
Confidence 443
No 356
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.78 E-value=0.013 Score=53.39 Aligned_cols=67 Identities=9% Similarity=0.067 Sum_probs=46.0
Q ss_pred ccccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc-c-----cccCCCHHHHhhcCCEEEEecCC
Q 021388 139 TTKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL-K-----YKYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 139 ~~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-~-----~~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
.....+++|.|.|. |.||+.+++.|...|++|.+.+|+..... . .....++.+++..+|+|+.+...
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 34688999999997 99999999999999999999998765311 0 11123456778899999876643
No 357
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.78 E-value=0.031 Score=49.80 Aligned_cols=34 Identities=29% Similarity=0.373 Sum_probs=30.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCC
Q 021388 144 GKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTE 177 (313)
Q Consensus 144 g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~ 177 (313)
.++|.|.|. |.+|+.+++.|...|++|.+.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 468999996 9999999999999999999999875
No 358
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.77 E-value=0.032 Score=53.59 Aligned_cols=90 Identities=17% Similarity=0.291 Sum_probs=65.0
Q ss_pred ccCCCEEEEEcCC----------hHHHHHHHHHHhCCCCEEEecCCCCCc----cc--cccCCCHHHHhhcCCEEEEecC
Q 021388 141 KFTGKTVGIIGLG----------RIGMAVAKRAEAFSCPINYYSRTEKPN----LK--YKYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 141 ~l~g~~igiiG~G----------~iG~~iA~~l~~~G~~V~~~~~~~~~~----~~--~~~~~~l~e~~~~aDvV~~~lp 204 (313)
.+.|++|+|+|+- .-...+++.|...|++|.+|||..... .+ .....++++.++.+|+|++++.
T Consensus 315 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~ 394 (450)
T 3gg2_A 315 NVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVTE 394 (450)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEECSC
T ss_pred cCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEccC
Confidence 4789999999985 357889999999999999999976421 11 2345678899999999999987
Q ss_pred CChhhhcccCHH-HHhccCCCcEEEEcCCCc
Q 021388 205 LTEETRHIINRE-VIDALGPKGVLINIGRGP 234 (313)
Q Consensus 205 ~~~~t~~li~~~-~l~~mk~ga~lIn~~rg~ 234 (313)
..+ -+. ++-+ +.+.|+ +.+++|+ |+-
T Consensus 395 ~~~-f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 395 WKE-FRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp CGG-GSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred CHH-Hhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 543 222 3433 444565 6788995 543
No 359
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.76 E-value=0.017 Score=52.36 Aligned_cols=67 Identities=9% Similarity=-0.053 Sum_probs=49.3
Q ss_pred ccccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc-------ccc----cC---CCHHHHhh--cCCEEEE
Q 021388 139 TTKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL-------KYK----YY---PSVVELAS--NCHILVV 201 (313)
Q Consensus 139 ~~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-------~~~----~~---~~l~e~~~--~aDvV~~ 201 (313)
...+.|++|.|.|. |.||+.+++.|...|++|.+.+|+..... ... .. .+++++++ ..|+|+.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 35689999999987 99999999999999999999998543211 111 01 23556677 8999887
Q ss_pred ecCC
Q 021388 202 ACPL 205 (313)
Q Consensus 202 ~lp~ 205 (313)
+...
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 7653
No 360
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.75 E-value=0.0095 Score=53.50 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=42.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHH-hCCCCEE-EecCCCCC----cc---------ccccCCCHHHHhhcCCEEEEec
Q 021388 145 KTVGIIGL-GRIGMAVAKRAE-AFSCPIN-YYSRTEKP----NL---------KYKYYPSVVELASNCHILVVAC 203 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~-~~G~~V~-~~~~~~~~----~~---------~~~~~~~l~e~~~~aDvV~~~l 203 (313)
.+|+|+|+ |.||+.+++.+. .-|+++. ++|+.... .. +.....++++++..+|+|+-+.
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft 80 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT 80 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcC
Confidence 58999998 999999999876 4577765 77776532 11 1122456778888999999454
No 361
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=95.74 E-value=0.15 Score=48.82 Aligned_cols=156 Identities=14% Similarity=0.152 Sum_probs=106.0
Q ss_pred CcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCC-
Q 021388 90 GVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSC- 168 (313)
Q Consensus 90 gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~- 168 (313)
.|++.|.. . .-+|=-+++-+++.+|-. +..+...+|.|.|.|.-|-.+|+.+...|.
T Consensus 187 ~ipvFnDD-~--qGTA~V~lAgllnAlki~-------------------gk~l~d~riV~~GAGaAGigia~ll~~~G~~ 244 (487)
T 3nv9_A 187 DIPVWHDD-Q--QGTASVTLAGLLNALKLV-------------------KKDIHECRMVFIGAGSSNTTCLRLIVTAGAD 244 (487)
T ss_dssp SSCEEETT-T--HHHHHHHHHHHHHHHHHH-------------------TCCGGGCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred cCCccccc-c--chHHHHHHHHHHHHHHHh-------------------CCChhhcEEEEECCCHHHHHHHHHHHHcCCC
Confidence 79999986 3 346667888888887733 456888999999999999999999999999
Q ss_pred --CEEEecCCC----CCc-c-----c------c--c---cCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhccCCCc
Q 021388 169 --PINYYSRTE----KPN-L-----K------Y--K---YYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKG 225 (313)
Q Consensus 169 --~V~~~~~~~----~~~-~-----~------~--~---~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga 225 (313)
+++.+|+.. ... . . + . ...+|.|+++.+|+++-.- .. ..++++++.++.|.+.+
T Consensus 245 ~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S-~~--~pg~ft~e~V~~Ma~~P 321 (487)
T 3nv9_A 245 PKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLS-TP--GPGVVKAEWIKSMGEKP 321 (487)
T ss_dssp GGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECC-CS--SCCCCCHHHHHTSCSSC
T ss_pred cccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEec-cc--CCCCCCHHHHHhhcCCC
Confidence 799998742 110 0 0 0 0 2347999999999775432 11 14689999999999999
Q ss_pred EEEEcCCCcc-ccHHHHHHHHHhCCeeEEEecCCCCCCCCCCcccCCCceEEccCCC
Q 021388 226 VLINIGRGPH-VDERELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLMPHVG 281 (313)
Q Consensus 226 ~lIn~~rg~~-vd~~al~~al~~~~l~ga~lDV~~~Ep~~~~~L~~~pnv~lTPH~a 281 (313)
++.=.|.... +..++ +.+.|+..-| ....+.|+ +..|+++-|-++
T Consensus 322 IIFaLSNPtpEi~pe~---A~~~G~aIvA----TGrsd~Pn----Q~NN~liFPGI~ 367 (487)
T 3nv9_A 322 IVFCCANPVPEIYPYE---AKEAGAYIVA----TGRGDFPN----QVNNSVGFPGIL 367 (487)
T ss_dssp EEEECCSSSCSSCHHH---HHHTTCSEEE----ESCTTSSS----BCCGGGTHHHHH
T ss_pred EEEECCCCCccCCHHH---HHHhCCEEEE----ECCCCCcc----cCcceeEcchhh
Confidence 9998887654 22222 2335653322 12222222 566777666543
No 362
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.72 E-value=0.038 Score=49.54 Aligned_cols=39 Identities=31% Similarity=0.237 Sum_probs=34.2
Q ss_pred cccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 140 TKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 140 ~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.++.||++.|.|. |.||+.+|+.|...|++|.+.+++..
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 82 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE 82 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 4589999999976 78999999999999999999888754
No 363
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.71 E-value=0.0048 Score=57.33 Aligned_cols=88 Identities=22% Similarity=0.306 Sum_probs=59.8
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCC---CCcc-----ccccC-C-CHHHHh----hcCCEEEEecCCC
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTE---KPNL-----KYKYY-P-SVVELA----SNCHILVVACPLT 206 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~---~~~~-----~~~~~-~-~l~e~~----~~aDvV~~~lp~~ 206 (313)
.+.|++|.|+|.|.+|..+++.++.+|++|++.+++. ++.. ++... . ++.+.+ ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 4679999999999999999999999999999999876 3211 11111 0 111111 2478888877643
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 207 EETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
... + +..+..|+++..+|+++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 221 0 445677788888888764
No 364
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.69 E-value=0.27 Score=46.64 Aligned_cols=105 Identities=16% Similarity=0.132 Sum_probs=71.0
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHh-CCCCEE-EecCCCC--Cccc------------------c--ccCCCHHHHh-
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEA-FSCPIN-YYSRTEK--PNLK------------------Y--KYYPSVVELA- 193 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~-~G~~V~-~~~~~~~--~~~~------------------~--~~~~~l~e~~- 193 (313)
+.++.|+++.|.|+|++|+..|+.|.. .|++|+ +.|.+.. .+.| + ....+.++++
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~ 283 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLE 283 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTT
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhc
Confidence 346899999999999999999999998 999987 4454211 0000 0 0011345554
Q ss_pred hcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 194 SNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 194 ~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
..||+++-|.. .+.++.+....+ ...+++-.+.+.+. .++ .+.|.+..+.
T Consensus 284 ~~~DIliP~A~-----~n~i~~~~a~~l-~ak~V~EgAN~p~t-~~a-~~~l~~~Gi~ 333 (415)
T 2tmg_A 284 LDVDILVPAAL-----EGAIHAGNAERI-KAKAVVEGANGPTT-PEA-DEILSRRGIL 333 (415)
T ss_dssp CSCSEEEECSS-----TTSBCHHHHTTC-CCSEEECCSSSCBC-HHH-HHHHHHTTCE
T ss_pred CCCcEEEecCC-----cCccCcccHHHc-CCeEEEeCCCcccC-HHH-HHHHHHCCCE
Confidence 47999987764 345778888888 36677777777764 444 4556677665
No 365
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=95.69 E-value=0.039 Score=50.64 Aligned_cols=149 Identities=14% Similarity=0.159 Sum_probs=92.2
Q ss_pred HHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCccc
Q 021388 59 AELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKL 138 (313)
Q Consensus 59 ~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~ 138 (313)
..+++++. -.|.....+-..+. ..+...+|+|.|..+...-++- +|+=++.+.+++
T Consensus 95 arvls~~~--D~iviR~~~~~~~~-~lA~~~~vPVINa~~~~~HPtQ--aLaDl~Ti~e~~------------------- 150 (321)
T 1oth_A 95 ARVLSSMA--DAVLARVYKQSDLD-TLAKEASIPIINGLSDLYHPIQ--ILADYLTLQEHY------------------- 150 (321)
T ss_dssp HHHHHHHC--SEEEEECSCHHHHH-HHHHHCSSCEEESCCSSCCHHH--HHHHHHHHHHHH-------------------
T ss_pred HHHHHHhC--CEEEEeCCChhHHH-HHHHhCCCCEEcCCCCCCCcHH--HHHHHHHHHHHh-------------------
Confidence 34555653 34444443322221 2233457999998664433321 222233333321
Q ss_pred ccccCCCEEEEEcCC-hHHHHHHHHHHhCCCCEEEecCCCCC-cc-------------c--cccCCCHHHHhhcCCEEEE
Q 021388 139 TTKFTGKTVGIIGLG-RIGMAVAKRAEAFSCPINYYSRTEKP-NL-------------K--YKYYPSVVELASNCHILVV 201 (313)
Q Consensus 139 ~~~l~g~~igiiG~G-~iG~~iA~~l~~~G~~V~~~~~~~~~-~~-------------~--~~~~~~l~e~~~~aDvV~~ 201 (313)
| .+.|.+|+++|=| ++.++.+..+..+|++|.+..|..-. .. | .....++++.++++|+|..
T Consensus 151 g-~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~ 229 (321)
T 1oth_A 151 S-SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLIT 229 (321)
T ss_dssp S-CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEE
T ss_pred C-CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEE
Confidence 1 3889999999985 48888888888999999988875432 11 1 2335789999999999988
Q ss_pred ecCCC---h-h--------hhcccCHHHHhccCCCcEEEEcCC
Q 021388 202 ACPLT---E-E--------TRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 202 ~lp~~---~-~--------t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
-+-.. + + ...-++++.++.+|++++|.-+.-
T Consensus 230 d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP 272 (321)
T 1oth_A 230 DTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLP 272 (321)
T ss_dssp CCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSC
T ss_pred eccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCC
Confidence 44211 1 1 113468888888888888888763
No 366
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.68 E-value=0.018 Score=55.48 Aligned_cols=107 Identities=21% Similarity=0.318 Sum_probs=73.7
Q ss_pred cCCCEEEEEcCC----hHHHHHHHHHHhCC-CCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHH
Q 021388 142 FTGKTVGIIGLG----RIGMAVAKRAEAFS-CPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINRE 216 (313)
Q Consensus 142 l~g~~igiiG~G----~iG~~iA~~l~~~G-~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~ 216 (313)
+.-++|+|||.+ ++|..+.+.++..| ..|+..++......+...+.++.++....|++++++|. +....++ ++
T Consensus 6 ~~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i~G~~~y~sl~~lp~~~Dlavi~vp~-~~~~~~v-~e 83 (457)
T 2csu_A 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPK-RFVKDTL-IQ 83 (457)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCH-HHHHHHH-HH
T ss_pred cCCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeECCEeccCCHHHcCCCCCEEEEecCH-HHHHHHH-HH
Confidence 556899999998 89999999999885 67888888765555666677888888889999999993 2333333 33
Q ss_pred HHhccCCCcEEEEcC-CCcccc-----HHHHHHHHHhCCee
Q 021388 217 VIDALGPKGVLINIG-RGPHVD-----ERELVSALVEGRLG 251 (313)
Q Consensus 217 ~l~~mk~ga~lIn~~-rg~~vd-----~~al~~al~~~~l~ 251 (313)
..+ ..-..+++..+ -.+.-+ ++++.+.+++..++
T Consensus 84 ~~~-~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~ 123 (457)
T 2csu_A 84 CGE-KGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMR 123 (457)
T ss_dssp HHH-HTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCE
T ss_pred HHH-cCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCE
Confidence 333 23333443332 222223 67888888887776
No 367
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.67 E-value=0.013 Score=53.82 Aligned_cols=93 Identities=19% Similarity=0.360 Sum_probs=59.5
Q ss_pred CCEEEEEc-CChHHHHHHHHHHhCC--CCEEEecCCCCCc-------ccc----cc---CCCHHHHhhcCCEEEEecCCC
Q 021388 144 GKTVGIIG-LGRIGMAVAKRAEAFS--CPINYYSRTEKPN-------LKY----KY---YPSVVELASNCHILVVACPLT 206 (313)
Q Consensus 144 g~~igiiG-~G~iG~~iA~~l~~~G--~~V~~~~~~~~~~-------~~~----~~---~~~l~e~~~~aDvV~~~lp~~ 206 (313)
.++|+|+| .|.+|..++..|...| .+|..+|+.+... ... .. ..++.+.++.+|+|+++.+..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 36899999 8999999999998877 6888999765410 000 11 124567899999999998533
Q ss_pred hhh---hc-c--cC----HHH---HhccCCCcEEEEcCCCccccH
Q 021388 207 EET---RH-I--IN----REV---IDALGPKGVLINIGRGPHVDE 238 (313)
Q Consensus 207 ~~t---~~-l--i~----~~~---l~~mk~ga~lIn~~rg~~vd~ 238 (313)
... +. + .| ++. +....+.+++++++ ..+|.
T Consensus 88 ~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S--NPv~~ 130 (326)
T 1smk_A 88 RKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS--NPVNS 130 (326)
T ss_dssp CCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC--SSHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CchHH
Confidence 210 00 0 01 112 22335788999874 55555
No 368
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.66 E-value=0.042 Score=50.80 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=41.3
Q ss_pred EEEEEcCChHHHHHHHHHHhC-CCCEE-EecCCCCCcc------cccc-----------------CCCHHHHhhcCCEEE
Q 021388 146 TVGIIGLGRIGMAVAKRAEAF-SCPIN-YYSRTEKPNL------KYKY-----------------YPSVVELASNCHILV 200 (313)
Q Consensus 146 ~igiiG~G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~~------~~~~-----------------~~~l~e~~~~aDvV~ 200 (313)
+|||+|+|.||+.+++.+... ++++. +.|++..... +... ..++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999999864 45654 4565533110 1111 114446667899999
Q ss_pred EecCCC
Q 021388 201 VACPLT 206 (313)
Q Consensus 201 ~~lp~~ 206 (313)
.|+|..
T Consensus 83 ~aTp~~ 88 (340)
T 1b7g_O 83 DTTPNG 88 (340)
T ss_dssp ECCSTT
T ss_pred ECCCCc
Confidence 999854
No 369
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.63 E-value=0.03 Score=49.91 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=30.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCC
Q 021388 144 GKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTE 177 (313)
Q Consensus 144 g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~ 177 (313)
+++|.|.|. |.+|+.+++.|...|++|.+.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 568999996 9999999999999999999999875
No 370
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=95.61 E-value=0.093 Score=47.81 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=70.6
Q ss_pred ccC-CCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc----------------ccccCCCHHHHhhcCCEEEEe
Q 021388 141 KFT-GKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL----------------KYKYYPSVVELASNCHILVVA 202 (313)
Q Consensus 141 ~l~-g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~~~~~~~l~e~~~~aDvV~~~ 202 (313)
.+. |.+|+++|= +++.++++..+..+|++|.+..|..-... ......++++.++++|+|..-
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~ 221 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITD 221 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEec
Confidence 377 999999996 57889999999999999998887542111 122356899999999999876
Q ss_pred cCC--Ch--h--------hhcccCHHHHhccCCCcEEEEcC---CCccccH
Q 021388 203 CPL--TE--E--------TRHIINREVIDALGPKGVLINIG---RGPHVDE 238 (313)
Q Consensus 203 lp~--~~--~--------t~~li~~~~l~~mk~ga~lIn~~---rg~~vd~ 238 (313)
.-. .. + ...-++.+.++.+|++++|.-+. ||.=|+.
T Consensus 222 ~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~ 272 (307)
T 3tpf_A 222 TWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSE 272 (307)
T ss_dssp CSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCH
T ss_pred CcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCH
Confidence 511 10 0 12346888999999999998887 5544443
No 371
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.60 E-value=0.0097 Score=55.35 Aligned_cols=64 Identities=8% Similarity=0.102 Sum_probs=47.7
Q ss_pred CCCEEEEEcCChHHH-HHHHHHHhCCCCE-EEecCCCCCcc------c-cccCCCHHHHhhc--CCEEEEecCCC
Q 021388 143 TGKTVGIIGLGRIGM-AVAKRAEAFSCPI-NYYSRTEKPNL------K-YKYYPSVVELASN--CHILVVACPLT 206 (313)
Q Consensus 143 ~g~~igiiG~G~iG~-~iA~~l~~~G~~V-~~~~~~~~~~~------~-~~~~~~l~e~~~~--aDvV~~~lp~~ 206 (313)
.-.+|||||+|.+|. .++..++.-|+++ .++|++++... + ...+.++++++++ .|+|++++|..
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 99 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSS 99 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHH
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 346899999999995 5777777778885 47788765321 2 2346799999975 89999999843
No 372
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.58 E-value=0.0074 Score=57.96 Aligned_cols=104 Identities=14% Similarity=0.126 Sum_probs=67.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHh----------CCCCEE-EecCCCCCcc----ccccCCCHHHHhh--cCCEEEEecCCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEA----------FSCPIN-YYSRTEKPNL----KYKYYPSVVELAS--NCHILVVACPLT 206 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~----------~G~~V~-~~~~~~~~~~----~~~~~~~l~e~~~--~aDvV~~~lp~~ 206 (313)
-.+|||||+|.||+.+++.+.. .+.+|. ++|++..... +...+.++++++. +.|+|+.++|..
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 3589999999999999887753 345554 5677654322 2334678899986 579999999853
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCCCcc-ccHHHHHHHHHhCCee
Q 021388 207 EETRHIINREVIDALGPKGVLINIGRGPH-VDERELVSALVEGRLG 251 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~rg~~-vd~~al~~al~~~~l~ 251 (313)
.....+ ....|+.|.-++-.--+.. -+.++|.++.++.+..
T Consensus 90 ~~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 90 EPAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp TTHHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 222212 3455667766665433222 2346788888777665
No 373
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.58 E-value=0.15 Score=48.47 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=69.6
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCCEE-EecCCCC--------C--------cccc------------ccCCCH
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRTEK--------P--------NLKY------------KYYPSV 189 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~~~--------~--------~~~~------------~~~~~l 189 (313)
+.++.|+++.|.|+|++|+.+++.|...|++|+ +.|.+.. . ..+. ....+.
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~ 284 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNP 284 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSST
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCc
Confidence 346899999999999999999999999999987 4444210 0 0011 111022
Q ss_pred HHHh-hcCCEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 190 VELA-SNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 190 ~e~~-~~aDvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
++++ ..||+++-|. +.+.|+.+..+.++ -.+++-.+.+.+. .++ .+.|.+..+.
T Consensus 285 ~~~~~~~~Dil~P~A-----~~~~I~~~~a~~l~-ak~V~EgAN~p~t-~~a-~~~l~~~Gi~ 339 (421)
T 1v9l_A 285 DAIFKLDVDIFVPAA-----IENVIRGDNAGLVK-ARLVVEGANGPTT-PEA-ERILYERGVV 339 (421)
T ss_dssp TGGGGCCCSEEEECS-----CSSCBCTTTTTTCC-CSEEECCSSSCBC-HHH-HHHHHTTTCE
T ss_pred hhhhcCCccEEEecC-----cCCccchhhHHHcC-ceEEEecCCCcCC-HHH-HHHHHHCCCE
Confidence 3443 4799887766 34456777777774 4677777777754 444 4677777776
No 374
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.58 E-value=0.028 Score=55.31 Aligned_cols=78 Identities=21% Similarity=0.195 Sum_probs=57.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcccc--------ccCCCHHHH-hhcCCEEEEecCCChhhhcccCH
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKY--------KYYPSVVEL-ASNCHILVVACPLTEETRHIINR 215 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~--------~~~~~l~e~-~~~aDvV~~~lp~~~~t~~li~~ 215 (313)
+++.|+|+|.+|+.+|+.|...|.+|.+.|.+++..... .....|+++ ++++|.++.+++.++ .+++-.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~--~ni~~~ 426 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDS--TNIFLT 426 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHH--HHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCch--HHHHHH
Confidence 789999999999999999999999999999887643211 112234443 789999999998654 334445
Q ss_pred HHHhccCCC
Q 021388 216 EVIDALGPK 224 (313)
Q Consensus 216 ~~l~~mk~g 224 (313)
...+.+.+.
T Consensus 427 ~~ak~l~~~ 435 (565)
T 4gx0_A 427 LACRHLHSH 435 (565)
T ss_dssp HHHHHHCSS
T ss_pred HHHHHHCCC
Confidence 566666666
No 375
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.57 E-value=0.012 Score=54.10 Aligned_cols=85 Identities=19% Similarity=0.240 Sum_probs=55.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCcc-----ccc-----cCCCHHHHhh------cCCEEEEecCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNL-----KYK-----YYPSVVELAS------NCHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~-----~~~-----~~~~l~e~~~------~aDvV~~~lp~ 205 (313)
.|++|.|+|.|.+|..+++.++.+|+ +|++.++++++.. ++. ...++.+.+. ..|+|+-++..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68899999999999999999999999 9999998754311 111 0122322221 36777766653
Q ss_pred ChhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 206 TEETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 206 ~~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
.+. -+..+..++++..+++++.
T Consensus 247 ~~~-----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PKA-----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHH-----HHHHHHHEEEEEEEEECCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEcc
Confidence 211 1345566677777777654
No 376
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.52 E-value=0.033 Score=51.17 Aligned_cols=88 Identities=14% Similarity=0.182 Sum_probs=57.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCC-------CEEEecCC----CCCcc-----------c----cccCCCHHHHhhcCC
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSC-------PINYYSRT----EKPNL-----------K----YKYYPSVVELASNCH 197 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~-------~V~~~~~~----~~~~~-----------~----~~~~~~l~e~~~~aD 197 (313)
++|+|+|. |.+|..++..|...|+ +|..+|+. .+... . .....++.+.++.||
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDAD 85 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCCC
Confidence 58999997 9999999999988775 78899987 22110 0 111257788999999
Q ss_pred EEEEecCCChh---hhc-cc--C----H---HHHhcc-CCCcEEEEcCC
Q 021388 198 ILVVACPLTEE---TRH-II--N----R---EVIDAL-GPKGVLINIGR 232 (313)
Q Consensus 198 vV~~~lp~~~~---t~~-li--~----~---~~l~~m-k~ga~lIn~~r 232 (313)
+|+.+...... ++. ++ | . +.+... ++.+++|+++.
T Consensus 86 ~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 86 VALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99887642211 110 10 1 1 122333 47889999973
No 377
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.51 E-value=0.096 Score=48.61 Aligned_cols=92 Identities=8% Similarity=0.065 Sum_probs=64.8
Q ss_pred cccCCCEEEEEcCC-hHHHHHHHHHHhCCCCEEEecCCCCC-cc-----------------ccccCCCHHHHhhcCCEEE
Q 021388 140 TKFTGKTVGIIGLG-RIGMAVAKRAEAFSCPINYYSRTEKP-NL-----------------KYKYYPSVVELASNCHILV 200 (313)
Q Consensus 140 ~~l~g~~igiiG~G-~iG~~iA~~l~~~G~~V~~~~~~~~~-~~-----------------~~~~~~~l~e~~~~aDvV~ 200 (313)
..+.|.+|+++|=+ ++.++++..+..+|++|.+..|..-. .. .+....+++|.++++|+|.
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvy 263 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIV 263 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEE
Confidence 45899999999976 57888889999999999988875431 10 1223568999999999998
Q ss_pred Eec--CCChh----------hhcccCHHHHhc--cCCCcEEEEcC
Q 021388 201 VAC--PLTEE----------TRHIINREVIDA--LGPKGVLINIG 231 (313)
Q Consensus 201 ~~l--p~~~~----------t~~li~~~~l~~--mk~ga~lIn~~ 231 (313)
.-. +...+ ...-++.+.++. +|++++|.-+.
T Consensus 264 td~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 264 TDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp ECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred eCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 643 11111 113467778877 78888887765
No 378
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.49 E-value=0.047 Score=48.96 Aligned_cols=41 Identities=20% Similarity=0.364 Sum_probs=37.1
Q ss_pred ccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCC
Q 021388 137 KLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTE 177 (313)
Q Consensus 137 ~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~ 177 (313)
+...++.|++|.|||.|.+|...++.|...|++|.++++..
T Consensus 6 pl~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 6 QLAHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EEEECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred eEEEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45567999999999999999999999999999999998754
No 379
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.47 E-value=0.11 Score=49.73 Aligned_cols=105 Identities=12% Similarity=0.129 Sum_probs=65.6
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCCEE-EecCCCC--Ccc-----------------------------ccccC
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRTEK--PNL-----------------------------KYKYY 186 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~~~--~~~-----------------------------~~~~~ 186 (313)
+.++.|+++.|-|+|++|+..|+.|...|++|+ +.|.+.. .+. +....
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~~v 313 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAKYF 313 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCEEE
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCceEe
Confidence 346899999999999999999999999999986 5553310 000 00011
Q ss_pred CCHHH-HhhcCCEEEEecCCChhhhcccCHHHHhccC--CCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 187 PSVVE-LASNCHILVVACPLTEETRHIINREVIDALG--PKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 187 ~~l~e-~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk--~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
+-++ +-..||+++-|. +.+.|+.+....+. .-.+++-.+.+.+.. ++ .+.|.+..+.
T Consensus 314 -~~~~i~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~-eA-~~iL~~rGI~ 373 (456)
T 3r3j_A 314 -ENQKPWNIPCDIAFPCA-----TQNEINENDADLFIQNKCKMIVEGANMPTHI-KA-LHKLKQNNII 373 (456)
T ss_dssp -CSCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHHTCCEEECCSSSCBCT-TH-HHHHHTTTCE
T ss_pred -CCccccccCccEEEeCC-----CccchhhHHHHHHHhcCCeEEEecCCCCCCH-HH-HHHHHHCCCE
Confidence 1122 234578776554 34567777776662 245666667777543 33 3567666665
No 380
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.46 E-value=0.01 Score=52.46 Aligned_cols=60 Identities=12% Similarity=-0.027 Sum_probs=45.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccc----cCCCHHHHhhcCCEEEEecCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYK----YYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~----~~~~l~e~~~~aDvV~~~lp~ 205 (313)
.++|.|.|.|.+|+.+++.|...|++|.+.+|+..... +.. ...+++ +..+|+|+.+...
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence 37899999999999999999999999999998765321 111 122333 7789999877754
No 381
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.46 E-value=0.014 Score=54.00 Aligned_cols=88 Identities=22% Similarity=0.218 Sum_probs=60.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc-----CC-CHHHHh-hcCCEEEEecCCChhhh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY-----YP-SVVELA-SNCHILVVACPLTEETR 210 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~-----~~-~l~e~~-~~aDvV~~~lp~~~~t~ 210 (313)
.|++|.|+|.|.+|...++.++.+|++|++.++++++.. ++.. .. ++.+.+ ...|+|+-+++.++ .
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~--~ 256 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT--D 256 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST--T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCc--H
Confidence 478999999999999999999999999999998765421 2211 11 332222 46899988887521 1
Q ss_pred cccCHHHHhccCCCcEEEEcCCC
Q 021388 211 HIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg 233 (313)
..+ +..+..++++..++.++..
T Consensus 257 ~~~-~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 257 IDF-NIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp CCT-TTGGGGEEEEEEEEECCCC
T ss_pred HHH-HHHHHHhcCCCEEEEecCC
Confidence 112 3456778888888888753
No 382
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.46 E-value=0.043 Score=50.89 Aligned_cols=86 Identities=15% Similarity=0.193 Sum_probs=60.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc-----ccccc----C---CCHHHHhh-----cCCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN-----LKYKY----Y---PSVVELAS-----NCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~~~-----~aDvV~~~lp 204 (313)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++. .++.. . .++.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 799998776532 12211 1 23444332 4798888776
Q ss_pred CChhhhcccCHHHHhccCCC-cEEEEcCCC
Q 021388 205 LTEETRHIINREVIDALGPK-GVLINIGRG 233 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~g-a~lIn~~rg 233 (313)
..+ + -+..+..++++ ..+|.++-.
T Consensus 272 ~~~-~----~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 272 NVG-V----MRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECSCC
T ss_pred CHH-H----HHHHHHHhhcCCcEEEEEcCC
Confidence 322 1 14567788888 888887743
No 383
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.44 E-value=0.028 Score=49.71 Aligned_cols=61 Identities=18% Similarity=0.145 Sum_probs=45.7
Q ss_pred CEEEEEc-CChHHHHHHHHHHhC-CCCEEEecCCCCCcc-----ccc-------cCCCHHHHhhcCCEEEEecCC
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAF-SCPINYYSRTEKPNL-----KYK-------YYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~-G~~V~~~~~~~~~~~-----~~~-------~~~~l~e~~~~aDvV~~~lp~ 205 (313)
++|.|.| .|.+|+.+++.|... |++|.+.+|++.... +.. ...++.++++.+|+|+.+.+.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 3688998 599999999999987 999999998765322 111 123466788999999877654
No 384
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.44 E-value=0.025 Score=48.78 Aligned_cols=61 Identities=15% Similarity=0.064 Sum_probs=43.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcccc-----ccCCCHHHHhh----cCCEEEEecCC
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNLKY-----KYYPSVVELAS----NCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~-----~~~~~l~e~~~----~aDvV~~~lp~ 205 (313)
|++.|.|. |.||+.+++.|...|++|++.+|+....... ....+++++++ ..|+|+.+...
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence 47888876 9999999999999999999999876532111 11123445554 78999877643
No 385
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=95.44 E-value=0.0089 Score=51.67 Aligned_cols=62 Identities=13% Similarity=0.154 Sum_probs=43.9
Q ss_pred CCEEEEEcCChHHHHHHHHH--HhCCCCEE-EecCCCC-Cc-----cccc--cCCCHHHHhhc--CCEEEEecCC
Q 021388 144 GKTVGIIGLGRIGMAVAKRA--EAFSCPIN-YYSRTEK-PN-----LKYK--YYPSVVELASN--CHILVVACPL 205 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l--~~~G~~V~-~~~~~~~-~~-----~~~~--~~~~l~e~~~~--aDvV~~~lp~ 205 (313)
.++++|+|.|++|+.+++.+ ...|+++. ++|.++. .. .+.. ..+++++++++ .|.+++++|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCc
Confidence 35899999999999999973 45678865 5676665 21 1222 23567787764 8999999984
No 386
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.43 E-value=0.039 Score=51.22 Aligned_cols=85 Identities=16% Similarity=0.211 Sum_probs=57.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc-----ccccc----C---CCHHHHhh-----cCCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN-----LKYKY----Y---PSVVELAS-----NCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~~~-----~aDvV~~~lp 204 (313)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++. .++.. . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 57899999999999999999999999 799998776532 12210 1 12333322 3688877765
Q ss_pred CChhhhcccCHHHHhccCCC-cEEEEcCC
Q 021388 205 LTEETRHIINREVIDALGPK-GVLINIGR 232 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~g-a~lIn~~r 232 (313)
..+ + + +..+..++++ ..++.++-
T Consensus 271 ~~~-~---~-~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RLD-T---M-VTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CHH-H---H-HHHHHHBCTTTCEEEECSC
T ss_pred CHH-H---H-HHHHHHhhcCCcEEEEecc
Confidence 321 1 1 4456777887 77777763
No 387
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.43 E-value=0.0058 Score=56.68 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=45.7
Q ss_pred CEEEEEcCChHHHHHHHHHHhC--------CCCE-EEecCCCCCcc------cc-ccCCCHHHHhh--cCCEEEEecCCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF--------SCPI-NYYSRTEKPNL------KY-KYYPSVVELAS--NCHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~--------G~~V-~~~~~~~~~~~------~~-~~~~~l~e~~~--~aDvV~~~lp~~ 206 (313)
-+|||||+|.||+.-++.++.. +++| .++|++++... +. ..+.+++++++ +.|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 4799999999999888777643 2354 46788765321 22 34678999986 479999999954
Q ss_pred hh
Q 021388 207 EE 208 (313)
Q Consensus 207 ~~ 208 (313)
-+
T Consensus 87 ~H 88 (390)
T 4h3v_A 87 SH 88 (390)
T ss_dssp GH
T ss_pred HH
Confidence 43
No 388
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.43 E-value=0.045 Score=50.92 Aligned_cols=85 Identities=20% Similarity=0.255 Sum_probs=57.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc-----ccccc-------CCCHHHHhh-----cCCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN-----LKYKY-------YPSVVELAS-----NCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~-----~~~~~-------~~~l~e~~~-----~aDvV~~~lp 204 (313)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .++.. ..++.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 57899999999999999999999999 799999876532 12211 123333222 3788877765
Q ss_pred CChhhhcccCHHHHhccCCC-cEEEEcCC
Q 021388 205 LTEETRHIINREVIDALGPK-GVLINIGR 232 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~g-a~lIn~~r 232 (313)
.. .+ + +..+..+++| ..++.++-
T Consensus 273 ~~-~~---~-~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 NV-SV---M-RAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECSC
T ss_pred CH-HH---H-HHHHHHhhccCCEEEEEcc
Confidence 32 11 1 4466777775 77777663
No 389
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.40 E-value=0.061 Score=48.66 Aligned_cols=64 Identities=14% Similarity=0.057 Sum_probs=51.9
Q ss_pred ccCCCEEEEEcC---ChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCC
Q 021388 141 KFTGKTVGIIGL---GRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 141 ~l~g~~igiiG~---G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
.+.|.+|+++|= +++.++.+..+..+|++|.+..|..-... +.....+++|.++++|+|.. +..
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~ 214 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRL 214 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCc
Confidence 378999999997 89999999999999999998876432211 23446789999999999988 654
No 390
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.39 E-value=0.031 Score=51.19 Aligned_cols=107 Identities=19% Similarity=0.152 Sum_probs=68.9
Q ss_pred CCEEEEEcCChHHHH-HHHHHHhCCCCEEEecCCCCCc-------cccccC--CCHHHHh-hcCCEEEEec--C-CChhh
Q 021388 144 GKTVGIIGLGRIGMA-VAKRAEAFSCPINYYSRTEKPN-------LKYKYY--PSVVELA-SNCHILVVAC--P-LTEET 209 (313)
Q Consensus 144 g~~igiiG~G~iG~~-iA~~l~~~G~~V~~~~~~~~~~-------~~~~~~--~~l~e~~-~~aDvV~~~l--p-~~~~t 209 (313)
.++|.|||.|.+|.+ +|+.|+..|++|.++|....+. .+.... .+.+++. .++|+|+..- | .+|..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 478999999999996 9999999999999999865421 122211 2344454 5799998763 3 22321
Q ss_pred h-------cccCH-HHHhc--cCCCcE-EEEcCCCccccHHHHHHHHHhCCe
Q 021388 210 R-------HIINR-EVIDA--LGPKGV-LINIGRGPHVDERELVSALVEGRL 250 (313)
Q Consensus 210 ~-------~li~~-~~l~~--mk~ga~-lIn~~rg~~vd~~al~~al~~~~l 250 (313)
. .++.+ +++.. ++...+ -|--+.|+.....-+...|+....
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~ 135 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGL 135 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 1 13332 33443 343334 455667888888888888887543
No 391
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.36 E-value=0.038 Score=54.88 Aligned_cols=73 Identities=18% Similarity=0.267 Sum_probs=51.3
Q ss_pred cEEEcCCCC-ChHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcCChHHHHHHHHHHhCCC-
Q 021388 91 VRVTNTPDV-LTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSC- 168 (313)
Q Consensus 91 I~v~n~~~~-~~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~- 168 (313)
-+..+-... .....||.+.-+-|-+.|- ..|.... ...+.+++|.|||+|.+|..+|+.|...|.
T Consensus 285 ~~~~~l~~~~dp~~la~~~~~Lnlklm~w----------Rllp~~g---~ekL~~arVLIVGaGGLGs~vA~~La~aGVG 351 (615)
T 4gsl_A 285 PRVVDLSSLLDPLKIADQSVDLNLKLMKW----------RILPDLN---LDIIKNTKVLLLGAGTLGCYVSRALIAWGVR 351 (615)
T ss_dssp CEEEECHHHHCHHHHHHHHHHHHHHHHHH----------HTCTTCC---HHHHHTCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred eeEEeccccCCHHHHHhhhhhhhhHHHHH----------hhcchhh---HHHHhCCeEEEECCCHHHHHHHHHHHHcCCC
Confidence 355554433 5677888887776666441 1232211 135899999999999999999999999998
Q ss_pred CEEEecCC
Q 021388 169 PINYYSRT 176 (313)
Q Consensus 169 ~V~~~~~~ 176 (313)
++..+|..
T Consensus 352 ~ItLvD~D 359 (615)
T 4gsl_A 352 KITFVDNG 359 (615)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCC
Confidence 57788764
No 392
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.34 E-value=0.019 Score=52.63 Aligned_cols=85 Identities=22% Similarity=0.187 Sum_probs=57.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCccc----ccc-----CCCHHHHhh-----cCCEEEEecCCCh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNLK----YKY-----YPSVVELAS-----NCHILVVACPLTE 207 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~~----~~~-----~~~l~e~~~-----~aDvV~~~lp~~~ 207 (313)
.|++|.|+|.|.+|..+++.++.+|+ +|++.++++++... ... ..++.+.+. ..|+|+-++...+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 243 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEA 243 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCHH
Confidence 68899999999999999999999999 99999986542111 110 123333322 4688877775322
Q ss_pred hhhcccCHHHHhccCCCcEEEEcCC
Q 021388 208 ETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 208 ~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
. -+..+..|+++..++.++.
T Consensus 244 ~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 244 A-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp H-----HHHHHHHEEEEEEEEECCC
T ss_pred H-----HHHHHHHHhcCCEEEEEec
Confidence 1 1445677778878877764
No 393
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.33 E-value=0.24 Score=46.05 Aligned_cols=123 Identities=16% Similarity=0.111 Sum_probs=81.0
Q ss_pred hhhcCcEEEcCCCCCh---HHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCCcccccccCCCEEEEEcC--ChHHHHHH
Q 021388 86 CKEKGVRVTNTPDVLT---DDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKFTGKTVGIIGL--GRIGMAVA 160 (313)
Q Consensus 86 ~~~~gI~v~n~~~~~~---~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~~~~~~~l~g~~igiiG~--G~iG~~iA 160 (313)
+...+|+|.|.-|... .+.++. +.+.++. -+..+.|.+|+++|= +++.++.+
T Consensus 143 a~~s~vPVING~g~~~HPtQaL~Dl-----~Ti~e~~------------------~~~~l~gl~ia~vGD~~~~va~S~~ 199 (358)
T 4h31_A 143 GAFAGVPVWNGLTDEFHPTQILADF-----LTMLEHS------------------QGKALADIQFAYLGDARNNVGNSLM 199 (358)
T ss_dssp HHHSSSCEEESCCSSCCHHHHHHHH-----HHHHHTT------------------TTCCGGGCEEEEESCTTSHHHHHHH
T ss_pred hhhccCceECCCCcCCCchHHHHHH-----HHHHHHh------------------cCCCcCceEEEecCCCCcccchHHH
Confidence 3456899999766543 444442 3332211 123588999999995 48999999
Q ss_pred HHHHhCCCCEEEecCCCCCcc--------------c--cccCCCHHHHhhcCCEEEEecCCC----hh---------hhc
Q 021388 161 KRAEAFSCPINYYSRTEKPNL--------------K--YKYYPSVVELASNCHILVVACPLT----EE---------TRH 211 (313)
Q Consensus 161 ~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~e~~~~aDvV~~~lp~~----~~---------t~~ 211 (313)
..+..+|++|.+..|..-... + .....+++|.++.+|+|..-.-.. ++ ...
T Consensus 200 ~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y 279 (358)
T 4h31_A 200 VGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPY 279 (358)
T ss_dssp HHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGG
T ss_pred HHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCc
Confidence 999999999999887432111 1 223568999999999998543211 11 112
Q ss_pred ccCHHHHhc-cCCCcEEEEcC
Q 021388 212 IINREVIDA-LGPKGVLINIG 231 (313)
Q Consensus 212 li~~~~l~~-mk~ga~lIn~~ 231 (313)
-++.+.++. .||+++|.-+.
T Consensus 280 ~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 280 QVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CBCHHHHHHTTCTTCEEEECS
T ss_pred ccCHHHHHhcCCCCcEEECCC
Confidence 367788875 47788888765
No 394
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.33 E-value=0.017 Score=52.94 Aligned_cols=86 Identities=16% Similarity=0.225 Sum_probs=60.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----ccccc-----CCCHHHHh----hcCCEEEEecCCChh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKY-----YPSVVELA----SNCHILVVACPLTEE 208 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~-----~~~l~e~~----~~aDvV~~~lp~~~~ 208 (313)
.|++|.|+|.|.+|..+++.++.+|++|++.++++++. .++.. ..++.+.+ ...|+|+.++...+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 47899999999999999999999999999999875431 12111 12332222 458988887763221
Q ss_pred hhcccCHHHHhccCCCcEEEEcCCC
Q 021388 209 TRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 209 t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
-+..+..|+++..++.++..
T Consensus 244 -----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 244 -----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp -----HHHHHHHEEEEEEEEECCCC
T ss_pred -----HHHHHHHhhcCCEEEEeccc
Confidence 15567788888888888754
No 395
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=95.32 E-value=0.013 Score=51.82 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=34.0
Q ss_pred ccCCCEEEEEc---CChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 141 KFTGKTVGIIG---LGRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 141 ~l~g~~igiiG---~G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.+.||++.|.| .|.||+.+|+.|...|++|++.+|+..
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~ 44 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL 44 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChH
Confidence 47899999999 589999999999999999999988763
No 396
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.31 E-value=0.013 Score=54.56 Aligned_cols=86 Identities=16% Similarity=0.268 Sum_probs=60.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc---CCC---HHHHhhcCCEEEEecCCChhhhc
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY---YPS---VVELASNCHILVVACPLTEETRH 211 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~---~~~---l~e~~~~aDvV~~~lp~~~~t~~ 211 (313)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++.. ++.. ..+ .+++....|+|+-++.....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH---
Confidence 478999999999999999999999999999987765321 2211 111 12233467888888764221
Q ss_pred ccCHHHHhccCCCcEEEEcCCC
Q 021388 212 IINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 212 li~~~~l~~mk~ga~lIn~~rg 233 (313)
-+..+..++++..++.++..
T Consensus 271 --~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 271 --LDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp --HHHHHTTEEEEEEEEECCCC
T ss_pred --HHHHHHHhccCCEEEEeccC
Confidence 14567788888888888753
No 397
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.31 E-value=0.1 Score=50.33 Aligned_cols=100 Identities=17% Similarity=0.197 Sum_probs=61.2
Q ss_pred CEEEEEcCChHHHHHHHHHHh-CCC---CEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHH-h
Q 021388 145 KTVGIIGLGRIGMAVAKRAEA-FSC---PINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVI-D 219 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~-~G~---~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l-~ 219 (313)
++|.|||+|.||+.+++.+.. .++ +|.+.|+..... ++.+... ..+ .....+..+. .+.+ +
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-------~~~~~~g-~~~--~~~~Vdadnv----~~~l~a 79 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-------DVAQQYG-VSF--KLQQITPQNY----LEVIGS 79 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-------CHHHHHT-CEE--EECCCCTTTH----HHHTGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-------hHHhhcC-Cce--eEEeccchhH----HHHHHH
Confidence 358999999999999999874 566 688887654321 3333332 223 3333333322 1222 3
Q ss_pred ccCCCcEEEEcCCCccccHHHHHHHHHhCCeeEEEecCCCCCCC
Q 021388 220 ALGPKGVLINIGRGPHVDERELVSALVEGRLGGAGLDVFENEPH 263 (313)
Q Consensus 220 ~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ga~lDV~~~Ep~ 263 (313)
.++++-++||++- ....-++.++..+.++. ++|... ||.
T Consensus 80 Ll~~~DvVIN~s~--~~~~l~Im~acleaGv~--YlDTa~-E~~ 118 (480)
T 2ph5_A 80 TLEENDFLIDVSI--GISSLALIILCNQKGAL--YINAAT-EPW 118 (480)
T ss_dssp GCCTTCEEEECCS--SSCHHHHHHHHHHHTCE--EEESSC-CCC
T ss_pred HhcCCCEEEECCc--cccCHHHHHHHHHcCCC--EEECCC-Ccc
Confidence 4556688999763 34556666666666666 899876 553
No 398
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.29 E-value=0.046 Score=50.74 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=58.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc-----ccccc----C---CCHHHHhh-----cCCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN-----LKYKY----Y---PSVVELAS-----NCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~~~-----~aDvV~~~lp 204 (313)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++. .++.. . .++.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 57899999999999999999999999 799998776532 12211 1 23333222 4788887775
Q ss_pred CChhhhcccCHHHHhccCCC-cEEEEcCC
Q 021388 205 LTEETRHIINREVIDALGPK-GVLINIGR 232 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~g-a~lIn~~r 232 (313)
.. .+ + +..+..++++ ..++.++-
T Consensus 275 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TA-QT---L-KAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECCC
T ss_pred CH-HH---H-HHHHHHhhcCCCEEEEECC
Confidence 32 11 1 4567778888 77777764
No 399
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.28 E-value=0.049 Score=48.90 Aligned_cols=60 Identities=22% Similarity=0.304 Sum_probs=42.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCc---------cccc-------cCCCHHHHhhcCCEEEEecC
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPN---------LKYK-------YYPSVVELASNCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~---------~~~~-------~~~~l~e~~~~aDvV~~~lp 204 (313)
++|.|.|. |.+|+.+++.|...|++|.+.+|+.... .+.. ...++.++++.+|+|+.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 57999994 9999999999999999999999876411 1111 01234556777777766654
No 400
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.26 E-value=0.029 Score=50.30 Aligned_cols=61 Identities=11% Similarity=0.168 Sum_probs=46.0
Q ss_pred CCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcc--c-------cccCCCHHHHhhcCCEEEEecCC
Q 021388 144 GKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNL--K-------YKYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 144 g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--~-------~~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
+++|.|.| .|.+|+.+++.|...|++|.+.+|++.... + .. ..++.++++.+|+|+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 47899998 699999999999999999999998743221 1 11 33466778899999877653
No 401
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.25 E-value=0.022 Score=52.64 Aligned_cols=63 Identities=17% Similarity=0.150 Sum_probs=42.7
Q ss_pred CEEEEEcCChHHHHHHHHHHh-CCCCEEE-ecCCCCCc---cc---------------------cccCCCHHHHhhcCCE
Q 021388 145 KTVGIIGLGRIGMAVAKRAEA-FSCPINY-YSRTEKPN---LK---------------------YKYYPSVVELASNCHI 198 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~-~G~~V~~-~~~~~~~~---~~---------------------~~~~~~l~e~~~~aDv 198 (313)
.+|||+|+|.||+.+++.|.. -++++.+ .|+.+... .+ .....+.++++.++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 379999999999999999986 4567654 45442210 00 0001246677789999
Q ss_pred EEEecCCCh
Q 021388 199 LVVACPLTE 207 (313)
Q Consensus 199 V~~~lp~~~ 207 (313)
|+.|+|...
T Consensus 82 V~~atp~~~ 90 (337)
T 1cf2_P 82 VIDCTPEGI 90 (337)
T ss_dssp EEECCSTTH
T ss_pred EEECCCchh
Confidence 999998553
No 402
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.25 E-value=0.045 Score=50.73 Aligned_cols=85 Identities=19% Similarity=0.215 Sum_probs=59.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc-----ccccc----C---CCHHHHhh-----cCCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN-----LKYKY----Y---PSVVELAS-----NCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~-----~~~~~----~---~~l~e~~~-----~aDvV~~~lp 204 (313)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++. .++.. . .++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 699998776532 12211 1 23433332 4788888776
Q ss_pred CChhhhcccCHHHHhccCCC-cEEEEcCC
Q 021388 205 LTEETRHIINREVIDALGPK-GVLINIGR 232 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~g-a~lIn~~r 232 (313)
.. .+ + +..+..++++ ..++.++-
T Consensus 271 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RI-ET---M-MNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECCC
T ss_pred CH-HH---H-HHHHHHHhcCCCEEEEEcc
Confidence 32 21 1 4567788888 88888774
No 403
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.24 E-value=0.13 Score=49.52 Aligned_cols=105 Identities=10% Similarity=0.110 Sum_probs=65.9
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCCEE-EecCC-------CC-----------------Ccc-------ccccC
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRT-------EK-----------------PNL-------KYKYY 186 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~-------~~-----------------~~~-------~~~~~ 186 (313)
+.++.|++|.|-|+|++|+..|+.|...|.+|+ +.|.+ .- ... +....
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v 326 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYF 326 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEEC
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEe
Confidence 346889999999999999999999999999987 44432 10 000 00101
Q ss_pred CCHHH-HhhcCCEEEEecCCChhhhcccCHHHHhccC--CCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 187 PSVVE-LASNCHILVVACPLTEETRHIINREVIDALG--PKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 187 ~~l~e-~~~~aDvV~~~lp~~~~t~~li~~~~l~~mk--~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
. .++ +-..||+++-|. +.+.|+.+....+. .-.+++-.+.+.+ ..+| .+.|.+..+.
T Consensus 327 ~-~~~~~~~~~DI~iPcA-----~~~~I~~~na~~l~~~~ak~V~EgAN~p~-T~eA-~~~L~~rGIl 386 (470)
T 2bma_A 327 P-NEKPWGVPCTLAFPCA-----TQNDVDLDQAKLLQKNGCILVGEGANMPS-TVDA-INLFKSNNII 386 (470)
T ss_dssp S-SCCTTSSCCSEEEECS-----STTCBCSHHHHHHHHTTCCEEECCSSSCB-CHHH-HHHHHHTTCE
T ss_pred c-CcCeeecCccEEEecc-----ccCcCCHHHHHHHHhcCcEEEEeCCCCCC-CHHH-HHHHHHCCcE
Confidence 0 012 224788877665 34567666666662 2345666666664 5555 6777777776
No 404
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=95.24 E-value=0.091 Score=48.53 Aligned_cols=147 Identities=12% Similarity=0.106 Sum_probs=88.9
Q ss_pred HHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCCCCCh---HHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCCC
Q 021388 59 AELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTPDVLT---DDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD 135 (313)
Q Consensus 59 ~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~---~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~~ 135 (313)
..++.++. -.|.....+-..+ ...+...+|+|.|.-+... .+.++. +.+.++++
T Consensus 112 arvLs~~~--D~IviR~~~~~~~-~~lA~~~~vPVINag~~~~HPtQaLaDl-----~Ti~e~~~--------------- 168 (339)
T 4a8t_A 112 SRVLSRLV--DILMARVERHHSI-VDLANCATIPVINGMSDYNHPTQELGDL-----CTMVEHLP--------------- 168 (339)
T ss_dssp HHHHHHHC--SEEEEECSSHHHH-HHHHHHCSSCEEECCCSSCCHHHHHHHH-----HHHHHTCC---------------
T ss_pred HHHHHHhC--CEEEEecCcHHHH-HHHHHhCCCCEEECCCCCcCcHHHHHHH-----HHHHHHhh---------------
Confidence 34555553 3444443322222 1223446899999865432 333433 33322210
Q ss_pred cccccccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc--------------c--cccCCCHHHHhhcCCE
Q 021388 136 YKLTTKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL--------------K--YKYYPSVVELASNCHI 198 (313)
Q Consensus 136 ~~~~~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~e~~~~aDv 198 (313)
.|..+.|.+|+++|= +++.++++..+..+|++|.+..|..-... + .....+++ .++++|+
T Consensus 169 --~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDv 245 (339)
T 4a8t_A 169 --EGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADF 245 (339)
T ss_dssp --TTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSE
T ss_pred --cCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCE
Confidence 022488999999986 67889999999999999998887543211 1 22356788 9999999
Q ss_pred EEEecC----CCh----h----h--hcccCHHHHhccCCCcEEEEcC
Q 021388 199 LVVACP----LTE----E----T--RHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 199 V~~~lp----~~~----~----t--~~li~~~~l~~mk~ga~lIn~~ 231 (313)
|..-+- ..+ + . ..-++.+.++.+|++++|.-+.
T Consensus 246 vytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 246 LYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp EEECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred EEecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 986331 001 1 0 1345777787788888877766
No 405
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.22 E-value=0.21 Score=47.91 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=37.0
Q ss_pred ccccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCC
Q 021388 137 KLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTE 177 (313)
Q Consensus 137 ~~~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~ 177 (313)
+...++.|++|.|+|.|.+|..-++.|...|++|.++++..
T Consensus 5 P~~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 5 PIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp EEEECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred eeEEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 45567899999999999999999999999999999999753
No 406
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=95.19 E-value=0.12 Score=49.91 Aligned_cols=102 Identities=17% Similarity=0.265 Sum_probs=69.4
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEe-cCCCC--Cccc---------------------cccCCCHHHHhhcC
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYY-SRTEK--PNLK---------------------YKYYPSVVELASNC 196 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~-~~~~~--~~~~---------------------~~~~~~l~e~~~~a 196 (313)
++.|++|.|-|+|++|+..|+.|...|++|++. |.+.. .+.+ .....+ +-+-..|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~~-~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEG-SILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEECS-CGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeecc-ccccccc
Confidence 589999999999999999999999999998864 32211 0000 000111 1133579
Q ss_pred CEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 197 HILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 197 DvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
|+++-|. +.+.|+.+....++ -.+++-.+.+. ...++ .+.|.+..+.
T Consensus 320 DIliPcA-----~~n~I~~~na~~l~-akiV~EgAN~p-~T~eA-~~iL~~rGIl 366 (501)
T 3mw9_A 320 DILIPAA-----SEKQLTKSNAPRVK-AKIIAEGANGP-TTPEA-DKIFLERNIM 366 (501)
T ss_dssp SEEEECS-----SSCCBCTTTGGGCC-CSEEECCSSSC-BCHHH-HHHHHHTTCE
T ss_pred eEEeecc-----ccCccCHhHHHHcC-ceEEEeCCCCc-CCHHH-HHHHHHCCCE
Confidence 9887654 44678888888885 56778888887 45544 4677777776
No 407
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.18 E-value=0.049 Score=50.46 Aligned_cols=85 Identities=16% Similarity=0.176 Sum_probs=58.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCcc-----cccc----C---CCHHHHhh-----cCCEEEEecC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNL-----KYKY----Y---PSVVELAS-----NCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~-----~~~~----~---~~l~e~~~-----~aDvV~~~lp 204 (313)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++.. ++.. . .++.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 6999987765321 2111 1 23333332 4788887775
Q ss_pred CChhhhcccCHHHHhccCCC-cEEEEcCC
Q 021388 205 LTEETRHIINREVIDALGPK-GVLINIGR 232 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~g-a~lIn~~r 232 (313)
..+ + -+..+..++++ ..++.++-
T Consensus 270 ~~~-~----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVK-V----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECSC
T ss_pred cHH-H----HHHHHHhhccCCcEEEEEec
Confidence 322 1 14567778888 88887764
No 408
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.17 E-value=0.021 Score=52.74 Aligned_cols=85 Identities=26% Similarity=0.327 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCC------cccccc---CCCH---HHHhhcCCEEEEecCCChhhh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKP------NLKYKY---YPSV---VELASNCHILVVACPLTEETR 210 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~------~~~~~~---~~~l---~e~~~~aDvV~~~lp~~~~t~ 210 (313)
.|.+|.|+|.|.+|...++.++.+|++|++.++++++ ..++.. ..+. .++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 5789999999999999999999999999999887653 223221 1222 2233457999888863321
Q ss_pred cccCHHHHhccCCCcEEEEcCC
Q 021388 211 HIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~r 232 (313)
-+..+..++++..++.++.
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2556788899999998874
No 409
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=95.14 E-value=0.015 Score=49.83 Aligned_cols=91 Identities=15% Similarity=0.052 Sum_probs=59.2
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHh---hcCCEEEEecCCC-h------hh
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELA---SNCHILVVACPLT-E------ET 209 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~---~~aDvV~~~lp~~-~------~t 209 (313)
.+.||++.|.|. |.||+.+|+.|...|++|.+.+|+... ......++++++ ...|+++.+.... + .+
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~ 80 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGL--DISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVE 80 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTC--CTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCccc--CCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCC
Confidence 367888889976 789999999999999999999987541 111122334444 4679988776432 1 00
Q ss_pred h---------c-----ccCHHHHhccCCCcEEEEcCCC
Q 021388 210 R---------H-----IINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 210 ~---------~-----li~~~~l~~mk~ga~lIn~~rg 233 (313)
. + .+.+..++.|+++..+||++..
T Consensus 81 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 81 VTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred HHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 0 0 0124456678878889999864
No 410
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.13 E-value=0.029 Score=51.55 Aligned_cols=86 Identities=15% Similarity=0.171 Sum_probs=60.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccc----c--CCCHHHHhh-----cCCEEEEecCC
Q 021388 143 TGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYK----Y--YPSVVELAS-----NCHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~----~--~~~l~e~~~-----~aDvV~~~lp~ 205 (313)
.|+++.|+|. |.+|..+++.++..|++|++.+++++.. .+.. . ..++.+.+. ..|+|+.+...
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 5789999999 8999999999999999999998876531 1111 0 124444333 47888887753
Q ss_pred ChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 206 TEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 206 ~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
.+. -+..+..|+++..+|+++..
T Consensus 249 ~~~-----~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 249 EAA-----IEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHH-----HHHHTTSEEEEEEEEECCCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEeCC
Confidence 221 14566778888888888753
No 411
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.12 E-value=0.023 Score=51.92 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=42.7
Q ss_pred CEEEEEcCChHHHHHHHHHHh--CCCCE-EEecCCCCC-c------cccc-cCCCHHHHhh-----cCCEEEEecC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEA--FSCPI-NYYSRTEKP-N------LKYK-YYPSVVELAS-----NCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~--~G~~V-~~~~~~~~~-~------~~~~-~~~~l~e~~~-----~aDvV~~~lp 204 (313)
.+|||||+|.||+.+++.+.. -++++ .++|++++. . .+.. ...+.+++++ +.|+|+.++|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp 80 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS 80 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC
Confidence 489999999999999999954 45654 467877554 1 1222 2345677754 5799999999
No 412
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.12 E-value=0.038 Score=51.97 Aligned_cols=87 Identities=17% Similarity=0.217 Sum_probs=59.2
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc-----ccccc-----CCCHHHH----h--hcCCEEEEecC
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN-----LKYKY-----YPSVVEL----A--SNCHILVVACP 204 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~-----~~~~~-----~~~l~e~----~--~~aDvV~~~lp 204 (313)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .++.. ..++.+. . ...|+|+-++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 357899999999999999999999999 799998776532 12211 1233322 2 14899988886
Q ss_pred CChhhhcccCHHHHhcc----CCCcEEEEcCC
Q 021388 205 LTEETRHIINREVIDAL----GPKGVLINIGR 232 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~m----k~ga~lIn~~r 232 (313)
....+. ...+..+ +++..++.++-
T Consensus 292 ~~~~~~----~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVW----PQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CHHHHH----HHHHHHHHHCSCCCCEEEECSC
T ss_pred CcHHHH----HHHHHHHHhccCCCcEEEEeCC
Confidence 432222 2334445 89999988874
No 413
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.09 E-value=0.045 Score=49.17 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=30.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCC
Q 021388 144 GKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTE 177 (313)
Q Consensus 144 g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~ 177 (313)
.++|.|.|. |.+|+.+++.|...|++|.+.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 467999995 9999999999999999999999876
No 414
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.08 E-value=0.091 Score=50.80 Aligned_cols=94 Identities=14% Similarity=0.131 Sum_probs=66.4
Q ss_pred ccCCCEEEEEcCCh----------HHHHHHHHHHhCCCCEEEecCCCCCcc----c------------cccCCCHHHHhh
Q 021388 141 KFTGKTVGIIGLGR----------IGMAVAKRAEAFSCPINYYSRTEKPNL----K------------YKYYPSVVELAS 194 (313)
Q Consensus 141 ~l~g~~igiiG~G~----------iG~~iA~~l~~~G~~V~~~~~~~~~~~----~------------~~~~~~l~e~~~ 194 (313)
.+.|++|+|+|+-- -...+++.|...|++|.+|||...... + .....++.+.++
T Consensus 325 ~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (478)
T 2y0c_A 325 DLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAAR 404 (478)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHTT
T ss_pred cCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHHh
Confidence 47899999999853 677899999999999999999753210 1 233457888999
Q ss_pred cCCEEEEecCCChhhhcccCHH-HHhccCCCcEEEEcCCCccccHH
Q 021388 195 NCHILVVACPLTEETRHIINRE-VIDALGPKGVLINIGRGPHVDER 239 (313)
Q Consensus 195 ~aDvV~~~lp~~~~t~~li~~~-~l~~mk~ga~lIn~~rg~~vd~~ 239 (313)
.+|+|++++...+ -+ -++-+ +...|+ +.+++|+ |+ +.|.+
T Consensus 405 ~ad~~vi~t~~~~-f~-~~~~~~~~~~~~-~~~i~D~-r~-~~~~~ 445 (478)
T 2y0c_A 405 DADALVIVTEWKI-FK-SPDFVALGRLWK-TPVIFDG-RN-LYEPE 445 (478)
T ss_dssp TCSEEEECSCCGG-GG-SCCHHHHHTTCS-SCEEEES-SC-CSCHH
T ss_pred CCCEEEEecCChH-hh-ccCHHHHHhhcC-CCEEEEC-CC-CCCHH
Confidence 9999999987643 22 23444 344555 5888987 44 34544
No 415
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=95.08 E-value=0.032 Score=48.27 Aligned_cols=94 Identities=11% Similarity=0.056 Sum_probs=58.8
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcccc-c-------cCCCHHHHh---------hcCCEEEEe
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNLKY-K-------YYPSVVELA---------SNCHILVVA 202 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~-~-------~~~~l~e~~---------~~aDvV~~~ 202 (313)
...+|++.|.|. |.||+.+++.|...|++|++.+|+....... . ...++++++ ...|+++.+
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~ 83 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV 83 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEc
Confidence 356889999974 7899999999999999999999876542210 0 011233333 267998887
Q ss_pred cCCC-------hhhh----cc----------cCHHHHhccCCCcEEEEcCCCc
Q 021388 203 CPLT-------EETR----HI----------INREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 203 lp~~-------~~t~----~l----------i~~~~l~~mk~ga~lIn~~rg~ 234 (313)
.... +.+. .. +.+..++.|+++..+||++...
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~ 136 (241)
T 1dhr_A 84 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKA 136 (241)
T ss_dssp CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred ccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHH
Confidence 6421 1110 01 1234556676677899988643
No 416
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.07 E-value=0.015 Score=48.77 Aligned_cols=36 Identities=25% Similarity=0.317 Sum_probs=32.2
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 143 TGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 143 ~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.|+++.|+| .|.||+.+++.++..|++|++.+++++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~ 74 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 74 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 578999999 699999999999999999999987654
No 417
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.06 E-value=0.014 Score=52.49 Aligned_cols=83 Identities=18% Similarity=0.200 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc-----cccc---C---CCHHHHhhcCCEEEEecCCChhhh
Q 021388 143 TGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKY---Y---PSVVELASNCHILVVACPLTEETR 210 (313)
Q Consensus 143 ~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~---~---~~l~e~~~~aDvV~~~lp~~~~t~ 210 (313)
.|+++.|+|. |.+|..+++.++.+|++|++.++++++.. +... . .++.+.+...|+|+. +.. +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~--- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K--- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H---
Confidence 4789999998 99999999999999999999988665321 2111 1 112222355777777 653 1
Q ss_pred cccCHHHHhccCCCcEEEEcCC
Q 021388 211 HIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~r 232 (313)
.-+..+..|+++..++.++.
T Consensus 200 --~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC--
T ss_pred --HHHHHHHhhccCCEEEEEeC
Confidence 12556677777777777764
No 418
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.06 E-value=0.046 Score=50.92 Aligned_cols=84 Identities=12% Similarity=0.008 Sum_probs=50.0
Q ss_pred CEEEEEcCChHHHHHHHHHHhC--C--CCEE-EecCCCCC--cc--ccccCCCHHHHhhcC-------------------
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF--S--CPIN-YYSRTEKP--NL--KYKYYPSVVELASNC------------------- 196 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~--G--~~V~-~~~~~~~~--~~--~~~~~~~l~e~~~~a------------------- 196 (313)
.+|||||+|.||+.+++.+... | ++|. ++|+.... .. +...+.++++++.+.
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~~~~~~~gi~~~~~~~e~l~~~~~~~~did~v~e~~~~~~~ 84 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPK 84 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSS
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhhhccccCCCCccccHHHHHhcccCCCCCHHHHHHHhhhccC
Confidence 3799999999999999999875 3 4554 45643321 11 222234566665543
Q ss_pred -CEEEEecCCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 197 -HILVVACPLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 197 -DvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
|+|+.|+|...... .+...|+.|.-+|-..-.
T Consensus 85 ~DvVV~~t~~~~~a~-----~~~~AL~aGkhVVtaNkk 117 (358)
T 1ebf_A 85 PVILVDNTSSAYIAG-----FYTKFVENGISIATPNKK 117 (358)
T ss_dssp CEEEEECSCCHHHHT-----THHHHHHTTCEEECCCCG
T ss_pred CcEEEEcCCChHHHH-----HHHHHHHCCCeEEecCcc
Confidence 78888888543222 123455566666654433
No 419
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.04 E-value=0.084 Score=46.51 Aligned_cols=87 Identities=14% Similarity=0.149 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhC-CCCEE-EecCCCCCccccccCCCHHHHhh-cCCEEEEecCCChhhhcccCHHHHhc
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAF-SCPIN-YYSRTEKPNLKYKYYPSVVELAS-NCHILVVACPLTEETRHIINREVIDA 220 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~-G~~V~-~~~~~~~~~~~~~~~~~l~e~~~-~aDvV~~~lp~~~~t~~li~~~~l~~ 220 (313)
.+|+|+|+ |.||+.+++.+... |+++. ++|+. .++++++. .+|+|+-+.+- +.+... ....
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~----------~dl~~~~~~~~DvvIDfT~p-~a~~~~----~~~a 65 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG----------DPLSLLTDGNTEVVIDFTHP-DVVMGN----LEFL 65 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT----------CCTHHHHHTTCCEEEECSCT-TTHHHH----HHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC----------CCHHHHhccCCcEEEEccCh-HHHHHH----HHHH
Confidence 37999995 99999999998865 88876 55653 24666665 79998855531 222211 2222
Q ss_pred cCCCcEEEEcCCCccccH-HHHHHHHH
Q 021388 221 LGPKGVLINIGRGPHVDE-RELVSALV 246 (313)
Q Consensus 221 mk~ga~lIn~~rg~~vd~-~al~~al~ 246 (313)
++.|.-+|-...|-..+. +.|.++.+
T Consensus 66 ~~~g~~~VigTTG~~~e~~~~l~~aa~ 92 (245)
T 1p9l_A 66 IDNGIHAVVGTTGFTAERFQQVESWLV 92 (245)
T ss_dssp HHTTCEEEECCCCCCHHHHHHHHHHHH
T ss_pred HHcCCCEEEcCCCCCHHHHHHHHHHHH
Confidence 445655555555632222 23444445
No 420
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.01 E-value=0.025 Score=52.56 Aligned_cols=83 Identities=11% Similarity=0.111 Sum_probs=51.2
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCC-CCEEEec--CCCC-Ccc----c-----------c--cc-CCCHHHHhh-cCCEEE
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFS-CPINYYS--RTEK-PNL----K-----------Y--KY-YPSVVELAS-NCHILV 200 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G-~~V~~~~--~~~~-~~~----~-----------~--~~-~~~l~e~~~-~aDvV~ 200 (313)
.+|||+| .|.+|+.+++.|.... ++|.+.. ++.. ... + . .. ..+.+++++ .+|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4899999 9999999999998654 5676553 2221 110 0 0 00 014455556 899999
Q ss_pred EecCCChhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 201 VACPLTEETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 201 ~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
+|+|.... .... .. .++.|..+|+.+-
T Consensus 89 ~atp~~~~-~~~a-~~---~~~aG~~VId~s~ 115 (354)
T 1ys4_A 89 SALPSDLA-KKFE-PE---FAKEGKLIFSNAS 115 (354)
T ss_dssp ECCCHHHH-HHHH-HH---HHHTTCEEEECCS
T ss_pred ECCCchHH-HHHH-HH---HHHCCCEEEECCc
Confidence 99984322 2121 22 2356888998874
No 421
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.00 E-value=0.14 Score=45.60 Aligned_cols=61 Identities=21% Similarity=0.267 Sum_probs=43.8
Q ss_pred CCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCc-------------cccc-------cCCCHHHHhhcCCEEEEe
Q 021388 144 GKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPN-------------LKYK-------YYPSVVELASNCHILVVA 202 (313)
Q Consensus 144 g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-------------~~~~-------~~~~l~e~~~~aDvV~~~ 202 (313)
.++|.|.| .|.+|+.+++.|...|++|.+.+|+.... .+.. ...++.++++.+|+|+.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 46799998 59999999999999999999999875311 1111 112355667778887766
Q ss_pred cC
Q 021388 203 CP 204 (313)
Q Consensus 203 lp 204 (313)
..
T Consensus 84 a~ 85 (313)
T 1qyd_A 84 LA 85 (313)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 422
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.00 E-value=0.03 Score=50.76 Aligned_cols=38 Identities=18% Similarity=0.319 Sum_probs=33.1
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCC
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTE 177 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~ 177 (313)
..|.+++|.|||+|.+|..+++.|...|. ++.++|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45899999999999999999999999997 577887543
No 423
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.00 E-value=0.078 Score=51.30 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=68.2
Q ss_pred ccCCCEEEEEcCC----------hHHHHHHHHHHhCCCCEEEecCCCCCcc----------------ccccCCCHHHHhh
Q 021388 141 KFTGKTVGIIGLG----------RIGMAVAKRAEAFSCPINYYSRTEKPNL----------------KYKYYPSVVELAS 194 (313)
Q Consensus 141 ~l~g~~igiiG~G----------~iG~~iA~~l~~~G~~V~~~~~~~~~~~----------------~~~~~~~l~e~~~ 194 (313)
.+.|++|+|+|+. .-...+++.|...|++|.+|||...... ......++.+.++
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAAR 411 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHT
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHc
Confidence 4789999999974 4778899999999999999999753210 0122356788899
Q ss_pred cCCEEEEecCCChhhhcccCH-HHHhccCCCcEEEEcCCCccccHHHH
Q 021388 195 NCHILVVACPLTEETRHIINR-EVIDALGPKGVLINIGRGPHVDEREL 241 (313)
Q Consensus 195 ~aDvV~~~lp~~~~t~~li~~-~~l~~mk~ga~lIn~~rg~~vd~~al 241 (313)
.+|+|++++...+ -+. ++- ++.+.|+...+++|+ |+ +.|.+.+
T Consensus 412 ~ad~~vi~t~~~~-f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~ 455 (481)
T 2o3j_A 412 GAHAIVVLTEWDE-FVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKAL 455 (481)
T ss_dssp TCSEEEECSCCGG-GTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHH
T ss_pred CCCEEEEcCCcHH-hhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHH
Confidence 9999999987542 222 343 444567776688886 54 3565543
No 424
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.99 E-value=0.022 Score=49.16 Aligned_cols=92 Identities=12% Similarity=0.115 Sum_probs=58.1
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCccc-c-------ccCCCHHHHh---------hcCCEEEEecC
Q 021388 143 TGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNLK-Y-------KYYPSVVELA---------SNCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~-~-------~~~~~l~e~~---------~~aDvV~~~lp 204 (313)
.||++.|.| .|.||+.+++.|...|++|++.+|+...... . ....++++++ ...|+|+.+..
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 81 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG 81 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCc
Confidence 567888887 4789999999999999999999987654321 0 0011223333 26799888764
Q ss_pred CC-------hhhhc----c----------cCHHHHhccCCCcEEEEcCCCc
Q 021388 205 LT-------EETRH----I----------INREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 205 ~~-------~~t~~----l----------i~~~~l~~mk~ga~lIn~~rg~ 234 (313)
.. +.+.. . +.+..++.|+++..+||++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 132 (236)
T 1ooe_A 82 GWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA 132 (236)
T ss_dssp CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred ccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 21 11110 1 1244566676677889988643
No 425
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.98 E-value=0.09 Score=50.08 Aligned_cols=108 Identities=17% Similarity=0.122 Sum_probs=70.2
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc------cccccC--CCHHHHhhcCCEEEEecCC---Chhhh
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN------LKYKYY--PSVVELASNCHILVVACPL---TEETR 210 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~------~~~~~~--~~l~e~~~~aDvV~~~lp~---~~~t~ 210 (313)
+.+|+|.|||+|..|.+.|+.|+..|++|.++|.+.... .+.... ....+.+..+|+|+..-.. .|...
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~~~ 82 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLS 82 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSCTTSCEEESSCCHHHHHTCSEEEECTTSCTTCHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhhCCCEEEECCCcHHHhccCCEEEeCCCCCCCCHHHH
Confidence 678999999999999999999999999999999765432 122111 1124555689998887422 22211
Q ss_pred -------cccCH-HHH-hccCCCcEEEEcCCCccccHHHHHHHHHhCC
Q 021388 211 -------HIINR-EVI-DALGPKGVLINIGRGPHVDERELVSALVEGR 249 (313)
Q Consensus 211 -------~li~~-~~l-~~mk~ga~lIn~~rg~~vd~~al~~al~~~~ 249 (313)
.++.+ +.+ ..++...+-|--+.|.-....-+...|++..
T Consensus 83 ~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~g 130 (439)
T 2x5o_A 83 AAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAG 130 (439)
T ss_dssp HHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 12332 122 2344445556666788887777888887654
No 426
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.97 E-value=0.052 Score=49.92 Aligned_cols=86 Identities=20% Similarity=0.203 Sum_probs=60.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccc----cC--CC-HHH---Hh-----hcCCEEEEe
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYK----YY--PS-VVE---LA-----SNCHILVVA 202 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~----~~--~~-l~e---~~-----~~aDvV~~~ 202 (313)
.|++|.|+|.|.+|...++.++.+|++|++.++++++. .++. .. .+ .++ .. ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 47899999999999999999999999999988765431 1221 11 12 222 22 258999888
Q ss_pred cCCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 203 CPLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 203 lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
+.... + + +..+..++++..++.++..
T Consensus 248 ~g~~~-~---~-~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNEK-C---I-TIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCHH-H---H-HHHHHHSCTTCEEEECSCC
T ss_pred CCCHH-H---H-HHHHHHHhcCCEEEEEecC
Confidence 76322 1 1 4567888999999998753
No 427
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=94.95 E-value=0.028 Score=49.12 Aligned_cols=93 Identities=17% Similarity=0.156 Sum_probs=59.0
Q ss_pred cCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCccccc---cCC---CHHHHhh-------cCCEEEEecCCC-
Q 021388 142 FTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNLKYK---YYP---SVVELAS-------NCHILVVACPLT- 206 (313)
Q Consensus 142 l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~---~~~---~l~e~~~-------~aDvV~~~lp~~- 206 (313)
..||++.|.|. |.||+.+|+.|...|++|++.+|+........ ... +++++++ ..|+|+.+....
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~ 99 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS 99 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 45789999985 67999999999999999999998876433211 112 2333433 359888776421
Q ss_pred ------hhhhc----c----------cCHHHHhccCCCcEEEEcCCCc
Q 021388 207 ------EETRH----I----------INREVIDALGPKGVLINIGRGP 234 (313)
Q Consensus 207 ------~~t~~----l----------i~~~~l~~mk~ga~lIn~~rg~ 234 (313)
..+.. . +.+..+..|+++..+|+++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 147 (251)
T 3orf_A 100 GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASA 147 (251)
T ss_dssp CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred CCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechh
Confidence 11110 0 1244566777778899988643
No 428
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=94.95 E-value=0.032 Score=49.68 Aligned_cols=61 Identities=13% Similarity=0.039 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHhCC-CCEEEecCCCCCc-------cccc-------cCCCHHHHhhcCCEEEEecC
Q 021388 144 GKTVGIIGL-GRIGMAVAKRAEAFS-CPINYYSRTEKPN-------LKYK-------YYPSVVELASNCHILVVACP 204 (313)
Q Consensus 144 g~~igiiG~-G~iG~~iA~~l~~~G-~~V~~~~~~~~~~-------~~~~-------~~~~l~e~~~~aDvV~~~lp 204 (313)
+++|.|.|. |.+|+.+++.|...| ++|.+.+|++... .+.. ...++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999997 999999999999888 9999999876532 1111 11245667889999988764
No 429
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.92 E-value=0.06 Score=49.80 Aligned_cols=63 Identities=10% Similarity=0.090 Sum_probs=47.4
Q ss_pred cCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccc-------cCCCHHHHhhcCCEEEEecC
Q 021388 142 FTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYK-------YYPSVVELASNCHILVVACP 204 (313)
Q Consensus 142 l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~-------~~~~l~e~~~~aDvV~~~lp 204 (313)
..+++|.|.|. |.||+.+++.|...|++|.+.+|+..... ... ...+++++++.+|+|+.+..
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 46789999987 99999999999999999999998764321 111 11235667889999977654
No 430
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=94.91 E-value=0.043 Score=47.70 Aligned_cols=92 Identities=17% Similarity=0.138 Sum_probs=57.2
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcccc-----ccCCCHHHHhhcC----CEEEEecCCCh-h--hhc
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNLKY-----KYYPSVVELASNC----HILVVACPLTE-E--TRH 211 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~-----~~~~~l~e~~~~a----DvV~~~lp~~~-~--t~~ 211 (313)
|++.|.| .|.||+.+|+.|...|++|++.+|+.+..... ....++++++++. |+|+.+..... . -..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~ 81 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGN 81 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHH
Confidence 4666776 47899999999999999999999876532111 1112345556544 99988764332 0 000
Q ss_pred ----------ccCHHHHhccCCC--cEEEEcCCCccc
Q 021388 212 ----------IINREVIDALGPK--GVLINIGRGPHV 236 (313)
Q Consensus 212 ----------li~~~~l~~mk~g--a~lIn~~rg~~v 236 (313)
.+.+..++.|++. ..+||++.....
T Consensus 82 ~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 82 VVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred HHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 1124455555433 788998876544
No 431
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.90 E-value=0.013 Score=51.58 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=42.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHhC--CCCEEEecCCCCCcc-----ccc-------cCCCHHHHhhcCCEEEEecC
Q 021388 146 TVGIIGL-GRIGMAVAKRAEAF--SCPINYYSRTEKPNL-----KYK-------YYPSVVELASNCHILVVACP 204 (313)
Q Consensus 146 ~igiiG~-G~iG~~iA~~l~~~--G~~V~~~~~~~~~~~-----~~~-------~~~~l~e~~~~aDvV~~~lp 204 (313)
+|.|.|. |.+|+.+++.|... |++|.+.+|++.... +.. ...++.++++.+|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 3678886 99999999999988 999999998765321 111 11245677889999987664
No 432
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.90 E-value=0.016 Score=53.65 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=33.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.|++|.|+|.|.+|...++.++.+|++|++.+++++
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 224 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSRE 224 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCch
Confidence 578999999999999999999999999999987654
No 433
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=94.87 E-value=0.11 Score=48.26 Aligned_cols=90 Identities=11% Similarity=0.092 Sum_probs=65.2
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc--------------c--cccCCCHHHHhhcCCEEEEec
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL--------------K--YKYYPSVVELASNCHILVVAC 203 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------------~--~~~~~~l~e~~~~aDvV~~~l 203 (313)
.+.|.+|+++|= +++.++++..+..+|++|.+..|..-... + .....+++ .++++|+|..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 488999999986 68889999999999999998887543211 1 22356788 999999998633
Q ss_pred C----C---C-hh-----h-hcccCHHHHhccCCCcEEEEcC
Q 021388 204 P----L---T-EE-----T-RHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 204 p----~---~-~~-----t-~~li~~~~l~~mk~ga~lIn~~ 231 (313)
- . . ++ . ..-++.+.++.+|++++|.-+.
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 270 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 1 0 0 11 0 1446788888888888888776
No 434
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=94.86 E-value=0.031 Score=47.94 Aligned_cols=64 Identities=19% Similarity=0.082 Sum_probs=47.4
Q ss_pred cCCCEEEEEc-CChHHHHHHHHHHhC--CCCEEEecCCCCCcc----cc-------ccCCCHHHHhhcCCEEEEecCC
Q 021388 142 FTGKTVGIIG-LGRIGMAVAKRAEAF--SCPINYYSRTEKPNL----KY-------KYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 142 l~g~~igiiG-~G~iG~~iA~~l~~~--G~~V~~~~~~~~~~~----~~-------~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
..+++|.|.| .|.||+.+++.|... |++|.+.+|++.... .. ....+++++++..|+|+.+...
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 3578999998 699999999999988 899999998753210 11 1123466778899999887653
No 435
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=94.81 E-value=0.047 Score=48.89 Aligned_cols=63 Identities=16% Similarity=0.103 Sum_probs=43.5
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcc-cc-------ccCCCHHHHhhc--CCEEEEecCC
Q 021388 143 TGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNL-KY-------KYYPSVVELASN--CHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-~~-------~~~~~l~e~~~~--aDvV~~~lp~ 205 (313)
..++|.|.| .|.||+.+++.|...|++|.+.+|+..... +. ....+++++++. .|+|+.+...
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 446788886 599999999999999999999998764311 11 111234556665 8999877654
No 436
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.80 E-value=0.077 Score=48.91 Aligned_cols=86 Identities=20% Similarity=0.125 Sum_probs=59.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCC-EEEecCCCCCccc----c-c---c-C-----CCHHHHh------hcCCEEEE
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCP-INYYSRTEKPNLK----Y-K---Y-Y-----PSVVELA------SNCHILVV 201 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~-V~~~~~~~~~~~~----~-~---~-~-----~~l~e~~------~~aDvV~~ 201 (313)
.|++|.|+|.|.+|...++.++.+|++ |++.++++++... . . . . .++.+.+ ...|+|+-
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 478999999999999999999999997 8888876543110 1 0 0 0 1122211 25899998
Q ss_pred ecCCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 202 ACPLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 202 ~lp~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
++... .+ + ...+..++++..++.++-.
T Consensus 259 ~~g~~-~~---~-~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 259 CTGVE-SS---I-AAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CSCCH-HH---H-HHHHHHSCTTCEEEECCCC
T ss_pred CCCCh-HH---H-HHHHHHhcCCCEEEEEccC
Confidence 87632 11 1 4567889999999998753
No 437
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.79 E-value=0.25 Score=47.27 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=31.9
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEE-ec
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINY-YS 174 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~-~~ 174 (313)
+.++.|+++.|.|+|++|+..|+.|...|.+|++ .|
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD 261 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG 261 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 3468999999999999999999999999999875 44
No 438
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=94.77 E-value=0.015 Score=51.36 Aligned_cols=60 Identities=13% Similarity=0.091 Sum_probs=44.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhC--CCCEEEecCCCCCcc-----ccc-------cCCCHHHHhhcCCEEEEecC
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAF--SCPINYYSRTEKPNL-----KYK-------YYPSVVELASNCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~--G~~V~~~~~~~~~~~-----~~~-------~~~~l~e~~~~aDvV~~~lp 204 (313)
|+|.|.|. |.+|+.+++.|... |++|.+.+|++.... +.. ...++.++++.+|+|+.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 46788886 99999999999988 999999998765321 111 11245677889999987664
No 439
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.77 E-value=0.019 Score=50.53 Aligned_cols=62 Identities=13% Similarity=0.126 Sum_probs=46.9
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCccc--c-------ccCCCHHHHhhcCCEEEEecC
Q 021388 143 TGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNLK--Y-------KYYPSVVELASNCHILVVACP 204 (313)
Q Consensus 143 ~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~--~-------~~~~~l~e~~~~aDvV~~~lp 204 (313)
.+|+|.|.| .|.||+.+++.|...|++|.+.+|+.....+ . ....++++++++.|+|+.+..
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence 457888998 7999999999999999999999988754321 1 112245677889999987653
No 440
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.76 E-value=0.012 Score=53.98 Aligned_cols=80 Identities=9% Similarity=0.020 Sum_probs=54.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc----cccc----CCC---HHHH-hhcCCEEEEecCCChhhhc
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL----KYKY----YPS---VVEL-ASNCHILVVACPLTEETRH 211 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----~~~~----~~~---l~e~-~~~aDvV~~~lp~~~~t~~ 211 (313)
.+++.|+|+|.+|+.+++.|...|. |.+.|++++... +... ..+ ++++ ++++|.|+++++..+. +
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~--n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE--T 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH--H
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH--H
Confidence 5689999999999999999999999 999998775322 1111 122 3344 6789999999885433 3
Q ss_pred ccCHHHHhccCCCcE
Q 021388 212 IINREVIDALGPKGV 226 (313)
Q Consensus 212 li~~~~l~~mk~ga~ 226 (313)
+.-...++.+.+...
T Consensus 192 ~~~~~~ar~~~~~~~ 206 (336)
T 1lnq_A 192 IHCILGIRKIDESVR 206 (336)
T ss_dssp HHHHHHHHTTCTTSE
T ss_pred HHHHHHHHHHCCCCe
Confidence 333445556666533
No 441
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.76 E-value=0.02 Score=52.48 Aligned_cols=61 Identities=16% Similarity=0.116 Sum_probs=44.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCCCEE-EecCCCC-Ccc---------c--cccCCCHHHHhhc--CCEEEEecCCC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSCPIN-YYSRTEK-PNL---------K--YKYYPSVVELASN--CHILVVACPLT 206 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~~V~-~~~~~~~-~~~---------~--~~~~~~l~e~~~~--aDvV~~~lp~~ 206 (313)
.++||||+|.+|+..++.+ .-+++|. ++|+++. ... + ...+.++++++++ .|+|++++|..
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~ 78 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFS 78 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcc
Confidence 4899999999999777766 5567765 6787652 211 2 2356799999874 89999999843
No 442
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=94.74 E-value=0.042 Score=49.60 Aligned_cols=36 Identities=25% Similarity=0.229 Sum_probs=32.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 143 TGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 143 ~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.|++|.|.|. |.||+.+++.|...|++|.+.+|+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 5789999987 99999999999999999999998764
No 443
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=94.74 E-value=0.043 Score=51.71 Aligned_cols=62 Identities=19% Similarity=0.453 Sum_probs=45.1
Q ss_pred ccccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccc------cc---cCC---CHHHHhhcCCEEEE
Q 021388 139 TTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLK------YK---YYP---SVVELASNCHILVV 201 (313)
Q Consensus 139 ~~~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~------~~---~~~---~l~e~~~~aDvV~~ 201 (313)
+....+++|+|+|-|..|+.+++.++.+|++|.++| .+..... .. ... .+.++++++|+|+.
T Consensus 19 ~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 19 GHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 445678999999999999999999999999999988 5432211 00 111 25567889998764
No 444
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.73 E-value=0.045 Score=50.85 Aligned_cols=37 Identities=24% Similarity=0.251 Sum_probs=32.6
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCC
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRT 176 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~ 176 (313)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|+.
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 45889999999999999999999999998 57788764
No 445
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.73 E-value=0.13 Score=47.65 Aligned_cols=82 Identities=22% Similarity=0.368 Sum_probs=54.3
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCCC-CEEEecCCC-C-Cccc-----c----cc-CCCHHHHhhcCCEEEEecCCChhhh
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFSC-PINYYSRTE-K-PNLK-----Y----KY-YPSVVELASNCHILVVACPLTEETR 210 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G~-~V~~~~~~~-~-~~~~-----~----~~-~~~l~e~~~~aDvV~~~lp~~~~t~ 210 (313)
.+||||| .|..|+.+.++|...-. ++....... . +... + .. ..+.+++..++|+|++|+|...
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~--- 90 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGA--- 90 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTH---
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHH---
Confidence 5799996 79999999999987643 555443221 1 1110 0 11 1245566688999999999553
Q ss_pred cccCHHHHhccCCCcEEEEcCCC
Q 021388 211 HIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 211 ~li~~~~l~~mk~ga~lIn~~rg 233 (313)
.++....+ .|+.+||.|..
T Consensus 91 ---s~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 91 ---SYDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp ---HHHHHTTC-CSCEEEESSST
T ss_pred ---HHHHHHHh-CCCEEEECChh
Confidence 34555666 79999999853
No 446
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.69 E-value=0.046 Score=49.59 Aligned_cols=109 Identities=15% Similarity=0.207 Sum_probs=62.4
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCCC--CEEEecC--CCCCccc-------c-------ccCCCHHHHhhcCCEEEEecCC
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFSC--PINYYSR--TEKPNLK-------Y-------KYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G~--~V~~~~~--~~~~~~~-------~-------~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
++|+|+| .|.+|..++..|...|. ++..+|+ ..+...+ . ....+..+.++.+|+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 4799999 99999999999987675 5788898 4422111 0 0000125678999999988753
Q ss_pred Chh---hhc-c------cCHH---HHhccCCCcEEEEcCCCccccHHHHHHH--HHhCCeeEE
Q 021388 206 TEE---TRH-I------INRE---VIDALGPKGVLINIGRGPHVDERELVSA--LVEGRLGGA 253 (313)
Q Consensus 206 ~~~---t~~-l------i~~~---~l~~mk~ga~lIn~~rg~~vd~~al~~a--l~~~~l~ga 253 (313)
... ++. + +-++ .+....+.+++++++..-=+-...+.+. +...++.|.
T Consensus 81 ~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 81 PRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHcCCCHHHeeec
Confidence 321 100 0 0112 2233467899999744322222333333 333466655
No 447
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.69 E-value=0.059 Score=49.66 Aligned_cols=86 Identities=19% Similarity=0.248 Sum_probs=60.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc-----ccccc---CC-----CHH-HHh----hcCCEEEEec
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN-----LKYKY---YP-----SVV-ELA----SNCHILVVAC 203 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~-----~~~~~---~~-----~l~-e~~----~~aDvV~~~l 203 (313)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .++.. .. ++. ++. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 799998766431 22211 11 111 121 2489999888
Q ss_pred CCChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 204 PLTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 204 p~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
.... + + ...+..++++..++.++-+
T Consensus 251 g~~~-~---~-~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 251 GAEA-S---I-QAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CCHH-H---H-HHHHHHSCTTCEEEECSCC
T ss_pred CChH-H---H-HHHHHHhcCCCEEEEEecC
Confidence 6322 1 1 4567889999999988753
No 448
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.66 E-value=0.013 Score=56.62 Aligned_cols=64 Identities=17% Similarity=0.205 Sum_probs=47.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCcc------ccc----cCC---CHHHH-hhcCCEEEEecCCCh
Q 021388 144 GKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL------KYK----YYP---SVVEL-ASNCHILVVACPLTE 207 (313)
Q Consensus 144 g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~------~~~----~~~---~l~e~-~~~aDvV~~~lp~~~ 207 (313)
.++|-|+|+|.+|+.+|+.|...|++|.+.|.+++... +.. ... .|+++ +++||+++.+++..+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 46899999999999999999999999999998765311 111 112 24443 688999987776543
No 449
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=94.66 E-value=0.088 Score=47.15 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=32.9
Q ss_pred cccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCC
Q 021388 140 TKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRT 176 (313)
Q Consensus 140 ~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~ 176 (313)
..+.||++.|.|. |.||+.+|+.|...|++|.+.+++
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3589999999975 689999999999999999998876
No 450
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=94.65 E-value=0.053 Score=49.14 Aligned_cols=66 Identities=17% Similarity=0.043 Sum_probs=45.4
Q ss_pred cccCCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcc-------ccc----cC---CCHHHHhhc--CCEEEEe
Q 021388 140 TKFTGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNL-------KYK----YY---PSVVELASN--CHILVVA 202 (313)
Q Consensus 140 ~~l~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-------~~~----~~---~~l~e~~~~--aDvV~~~ 202 (313)
..+.+++|.|.| .|.||+.+++.|...|++|.+.+|+..... +.. .. .+++++++. +|+|+.+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEEC
Confidence 457889999998 699999999999999999999988653211 111 01 234566776 9998877
Q ss_pred cCC
Q 021388 203 CPL 205 (313)
Q Consensus 203 lp~ 205 (313)
...
T Consensus 97 A~~ 99 (333)
T 2q1w_A 97 AAS 99 (333)
T ss_dssp CCC
T ss_pred cee
Confidence 643
No 451
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.64 E-value=0.032 Score=51.89 Aligned_cols=85 Identities=20% Similarity=0.310 Sum_probs=59.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCc-----cccc-----cCCCHHHHhh--------cCCEEEEec
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPN-----LKYK-----YYPSVVELAS--------NCHILVVAC 203 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~-----~~~~-----~~~~l~e~~~--------~aDvV~~~l 203 (313)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++. .++. ...++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 57899999999999999999999999 788888776432 1221 1224444433 378888776
Q ss_pred CCChhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 204 PLTEETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 204 p~~~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
... .+ + ...+..++++..++.++-
T Consensus 262 G~~-~~---~-~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GVA-ET---V-KQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CCH-HH---H-HHHHHHEEEEEEEEECSC
T ss_pred CCH-HH---H-HHHHHHhccCCEEEEEec
Confidence 522 21 1 456777888888888774
No 452
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.64 E-value=0.024 Score=51.84 Aligned_cols=85 Identities=16% Similarity=0.187 Sum_probs=58.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCc-----ccccc-----CCCHHHHh----hcCCEEEEecCCChh
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYKY-----YPSVVELA----SNCHILVVACPLTEE 208 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~~-----~~~l~e~~----~~aDvV~~~lp~~~~ 208 (313)
.|++|.|+|.|.+|...++.++.+|++|++.++++++. .++.. ..++.+.+ ...|+|+.+....+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~- 244 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK- 244 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH-
Confidence 57899999999999999999999999999998876432 12111 12333322 25788877765222
Q ss_pred hhcccCHHHHhccCCCcEEEEcCC
Q 021388 209 TRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 209 t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
+ + +..+..++++..++.++-
T Consensus 245 ~---~-~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 245 A---F-SQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp H---H-HHHHHHEEEEEEEEECSC
T ss_pred H---H-HHHHHHhccCCEEEEeCC
Confidence 1 1 456677888888888764
No 453
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.63 E-value=0.044 Score=50.34 Aligned_cols=64 Identities=17% Similarity=0.149 Sum_probs=46.8
Q ss_pred ccCCCEEEEEc-CChHHHHHHHHHHhC-CCCEEEecCCCCCcc------ccc--------cCCCHHHHhhcCCEEEEecC
Q 021388 141 KFTGKTVGIIG-LGRIGMAVAKRAEAF-SCPINYYSRTEKPNL------KYK--------YYPSVVELASNCHILVVACP 204 (313)
Q Consensus 141 ~l~g~~igiiG-~G~iG~~iA~~l~~~-G~~V~~~~~~~~~~~------~~~--------~~~~l~e~~~~aDvV~~~lp 204 (313)
.+.+++|.|.| .|.||+.+++.|... |++|.+.+|+..... +.. ...++.++++.+|+|+.+..
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 47789999999 699999999999987 999999998765321 111 11235567889999986554
No 454
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=94.63 E-value=0.051 Score=50.19 Aligned_cols=65 Identities=12% Similarity=0.207 Sum_probs=48.4
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCC-CCEEEecCCCCCc-------ccccc----C---CCHHHHhhcCCEEEEecC
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFS-CPINYYSRTEKPN-------LKYKY----Y---PSVVELASNCHILVVACP 204 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G-~~V~~~~~~~~~~-------~~~~~----~---~~l~e~~~~aDvV~~~lp 204 (313)
.+.+++|.|.|. |.||+.+++.|...| ++|.+.+|+.... ..... . .+++++++.+|+|+.+..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 478999999995 999999999999999 9999999875432 11110 1 134556778999987765
Q ss_pred C
Q 021388 205 L 205 (313)
Q Consensus 205 ~ 205 (313)
.
T Consensus 109 ~ 109 (377)
T 2q1s_A 109 Y 109 (377)
T ss_dssp C
T ss_pred c
Confidence 4
No 455
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=94.62 E-value=0.053 Score=47.91 Aligned_cols=40 Identities=28% Similarity=0.318 Sum_probs=33.9
Q ss_pred cccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCC
Q 021388 140 TKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKP 179 (313)
Q Consensus 140 ~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~ 179 (313)
..+.||++.|.|. |.||+.+|+.|...|++|++.+|+...
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~ 64 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAG 64 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTT
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3589999999976 679999999999999999999987654
No 456
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.62 E-value=0.047 Score=49.64 Aligned_cols=64 Identities=13% Similarity=0.115 Sum_probs=47.8
Q ss_pred ccCCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCc----------------cccc-------cCCCHHHHhhcC
Q 021388 141 KFTGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPN----------------LKYK-------YYPSVVELASNC 196 (313)
Q Consensus 141 ~l~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~----------------~~~~-------~~~~l~e~~~~a 196 (313)
.+.+++|.|.| .|.||+.+++.|...|++|.+.+|..... .+.. ...++.++++.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 36789999999 59999999999999999999999865421 1111 112356678889
Q ss_pred CEEEEecC
Q 021388 197 HILVVACP 204 (313)
Q Consensus 197 DvV~~~lp 204 (313)
|+|+.+..
T Consensus 102 d~Vih~A~ 109 (351)
T 3ruf_A 102 DHVLHQAA 109 (351)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99877664
No 457
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=94.60 E-value=0.082 Score=46.06 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=32.7
Q ss_pred cCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 142 FTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 142 l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
+.||++.|.|. |.||+.+++.|...|++|.+.+|+.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 57889888876 89999999999999999999988764
No 458
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.60 E-value=0.054 Score=47.62 Aligned_cols=38 Identities=26% Similarity=0.447 Sum_probs=34.2
Q ss_pred ccCCCEEEEEcCC---hHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 141 KFTGKTVGIIGLG---RIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 141 ~l~g~~igiiG~G---~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
+|.||++.|-|.+ .||+++|+.|...|++|.+.+|+.+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER 43 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 5899999999974 5999999999999999999998754
No 459
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.60 E-value=0.047 Score=52.05 Aligned_cols=82 Identities=12% Similarity=0.126 Sum_probs=59.4
Q ss_pred CCCEEEEEcCC----------hHHHHHHHHHHhCCCCEEEecCCCCCcc--------c--------cccCCCHHHHhhcC
Q 021388 143 TGKTVGIIGLG----------RIGMAVAKRAEAFSCPINYYSRTEKPNL--------K--------YKYYPSVVELASNC 196 (313)
Q Consensus 143 ~g~~igiiG~G----------~iG~~iA~~l~~~G~~V~~~~~~~~~~~--------~--------~~~~~~l~e~~~~a 196 (313)
.|++|+|+|+. .-...+++.|...|++|.+|||..+... + .....++.+.++.+
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 58999999997 5788999999999999999998532111 0 12345788899999
Q ss_pred CEEEEecCCChhhhcccCHHHHhccCCCcEEEEc
Q 021388 197 HILVVACPLTEETRHIINREVIDALGPKGVLINI 230 (313)
Q Consensus 197 DvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~ 230 (313)
|+|++++...+ -+.+ + .+.|+ +.+++|+
T Consensus 392 d~~vi~~~~~~-~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 392 DVLVLGNGDEL-FVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp SEEEECSCCGG-GHHH-H---HSCCT-TCEEEES
T ss_pred cEEEEeCCcHH-HHhh-h---HHhcC-CCEEEEC
Confidence 99999987532 2211 1 34455 6788887
No 460
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=94.60 E-value=0.063 Score=49.95 Aligned_cols=30 Identities=30% Similarity=0.408 Sum_probs=25.1
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEEEec
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPINYYS 174 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~~~~ 174 (313)
.+|||+|+|.||+.+.+.|... .++|.+.+
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivain 48 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAIN 48 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEec
Confidence 4899999999999999999865 57766554
No 461
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.58 E-value=0.067 Score=49.55 Aligned_cols=83 Identities=17% Similarity=0.086 Sum_probs=49.2
Q ss_pred CEEEEEcCChHHHHHHHHHHhC-CCCEEEe-cCCCCCcc-----------c-c--------------ccCCCHHHHhhcC
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF-SCPINYY-SRTEKPNL-----------K-Y--------------KYYPSVVELASNC 196 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~-G~~V~~~-~~~~~~~~-----------~-~--------------~~~~~l~e~~~~a 196 (313)
.+|||+|+|.||+.+++.+... +++|.+. |++++... + + ....+.++++..+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3799999999999999998765 5776544 33221100 0 0 0011234455789
Q ss_pred CEEEEecCCChhhhcccCHHHHhccCCCcEEEEcC
Q 021388 197 HILVVACPLTEETRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 197 DvV~~~lp~~~~t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
|+|+.|+|...... .. + -..++.|..+|..+
T Consensus 83 DiV~eatg~~~s~~-~a-~--~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKIGKQ-NL-E--NIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTHHHH-HH-H--HTTTTTTCEEEECT
T ss_pred CEEEECCCccccHH-HH-H--HHHHHCCCEEEECC
Confidence 99999998543211 10 1 24566776665543
No 462
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=94.53 E-value=0.051 Score=48.60 Aligned_cols=61 Identities=16% Similarity=0.125 Sum_probs=39.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc----ccccCCCHHHHhhc--CCEEEEecC
Q 021388 144 GKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL----KYKYYPSVVELASN--CHILVVACP 204 (313)
Q Consensus 144 g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~----~~~~~~~l~e~~~~--aDvV~~~lp 204 (313)
+++|.|.|. |.||+.+++.|...|++|.+.+|+..... ......++.++++. .|+|+.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 578999987 99999999999999999999997654310 11112345666664 899887764
No 463
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.44 E-value=0.018 Score=52.24 Aligned_cols=59 Identities=20% Similarity=0.198 Sum_probs=42.4
Q ss_pred CEEEEEcCChHHHHHHHHHHhCCC--CEEEecCCCCCccc-----------cc-----cCCCHHHHhhcCCEEEEec
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAFSC--PINYYSRTEKPNLK-----------YK-----YYPSVVELASNCHILVVAC 203 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~G~--~V~~~~~~~~~~~~-----------~~-----~~~~l~e~~~~aDvV~~~l 203 (313)
+||+|||.|.+|+++|-.|+..+. ++..||..++...+ .. ...+.-+.++.||+|++..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEec
Confidence 589999999999999999886664 69999987642211 00 0112235689999999986
No 464
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.44 E-value=0.036 Score=50.85 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=33.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCC
Q 021388 143 TGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKP 179 (313)
Q Consensus 143 ~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~ 179 (313)
.|++|.|+|. |.+|..+++.++.+|++|++.+++.++
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~ 196 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAA 196 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 5789999998 999999999999999999999886653
No 465
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=94.43 E-value=0.061 Score=53.30 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=32.7
Q ss_pred cccCCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCC
Q 021388 140 TKFTGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRT 176 (313)
Q Consensus 140 ~~l~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~ 176 (313)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 46899999999999999999999999998 57788643
No 466
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=94.41 E-value=0.16 Score=46.52 Aligned_cols=88 Identities=2% Similarity=-0.144 Sum_probs=61.8
Q ss_pred cCCCEEEE-----EcCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccccCCCHHHHhhcCCEEEEecCCCh----
Q 021388 142 FTGKTVGI-----IGLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYKYYPSVVELASNCHILVVACPLTE---- 207 (313)
Q Consensus 142 l~g~~igi-----iG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~l~e~~~~aDvV~~~lp~~~---- 207 (313)
+. .+|++ +|=+++.++++..+..+|++|.+..|..-... ......++++.++.+|+|..-.-..-
T Consensus 167 l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~ 245 (324)
T 1js1_X 167 PK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDN 245 (324)
T ss_dssp CE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTC
T ss_pred ee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCcc
Confidence 56 79999 99999999999999999999999887543222 23446789999999999987443110
Q ss_pred -------hhhcccCHHHHhccCCCcEEEEcC
Q 021388 208 -------ETRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 208 -------~t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
.....++++.++.+| +++|.-+.
T Consensus 246 ~~~~~~r~~~y~vt~e~l~~a~-~ai~MHcL 275 (324)
T 1js1_X 246 YGQILSTDRNWTVGDRQMAVTN-NAYFMHCL 275 (324)
T ss_dssp TTCCCCCCTTSSBCHHHHTTSS-SCEEECCS
T ss_pred ccchHHHhcCcccCHHHHHhcC-CcEEECCC
Confidence 012334555666555 55555554
No 467
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=94.39 E-value=0.069 Score=47.35 Aligned_cols=38 Identities=21% Similarity=0.286 Sum_probs=33.6
Q ss_pred cccCCCEEEEEcC-Ch--HHHHHHHHHHhCCCCEEEecCCC
Q 021388 140 TKFTGKTVGIIGL-GR--IGMAVAKRAEAFSCPINYYSRTE 177 (313)
Q Consensus 140 ~~l~g~~igiiG~-G~--iG~~iA~~l~~~G~~V~~~~~~~ 177 (313)
..+.||++.|.|. |. ||+.+|+.|...|++|++.+|+.
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 3589999999996 44 99999999999999999998876
No 468
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=94.37 E-value=0.046 Score=48.19 Aligned_cols=38 Identities=24% Similarity=0.319 Sum_probs=33.2
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.+.||++.|.|. |.||+.+|+.|...|++|++.+|+.+
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~ 41 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREER 41 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 367899999975 78999999999999999999988754
No 469
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=94.36 E-value=0.043 Score=50.71 Aligned_cols=84 Identities=11% Similarity=0.156 Sum_probs=52.2
Q ss_pred CEEEEEc-CChHHHHHHHHHHh-CCCCEEEe-cCCC--C--Ccc--------cc-c-cCC---CHHHHhhcCCEEEEecC
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEA-FSCPINYY-SRTE--K--PNL--------KY-K-YYP---SVVELASNCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~-~G~~V~~~-~~~~--~--~~~--------~~-~-~~~---~l~e~~~~aDvV~~~lp 204 (313)
.+|+|+| .|.+|+.+.+.|.. -++++..+ +++. . +.. +. . ... +.++++.++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 5899999 69999999999987 34566554 3331 1 110 10 0 111 34455589999999998
Q ss_pred CChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 205 LTEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 205 ~~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
... +.... . ..++.|+.+||.|..
T Consensus 85 ~~~-s~~~~-~---~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 85 HEV-SHDLA-P---QFLEAGCVVFDLSGA 108 (337)
T ss_dssp HHH-HHHHH-H---HHHHTTCEEEECSST
T ss_pred hHH-HHHHH-H---HHHHCCCEEEEcCCc
Confidence 432 22221 2 224679999999854
No 470
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.36 E-value=0.065 Score=52.08 Aligned_cols=62 Identities=21% Similarity=0.168 Sum_probs=47.6
Q ss_pred CCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcccc--ccCCCHHHHhhcCCEEEEecCC
Q 021388 144 GKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNLKY--KYYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 144 g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~--~~~~~l~e~~~~aDvV~~~lp~ 205 (313)
+++|.|.| .|.||+.+++.|...|++|.+.+|+....... .....+.+.+..+|+|+.+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCC
Confidence 68999999 69999999999999999999999886543221 1123345677899999876543
No 471
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.25 E-value=0.066 Score=49.39 Aligned_cols=30 Identities=33% Similarity=0.386 Sum_probs=24.3
Q ss_pred CEEEEEcCChHHHHHHHHHHh-CCCCEEEec
Q 021388 145 KTVGIIGLGRIGMAVAKRAEA-FSCPINYYS 174 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~-~G~~V~~~~ 174 (313)
.+|||+|+|.||+.+++.+.. -+++|.+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~ 34 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAIN 34 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEec
Confidence 489999999999999999875 457766543
No 472
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=94.25 E-value=0.086 Score=45.82 Aligned_cols=64 Identities=20% Similarity=0.212 Sum_probs=45.3
Q ss_pred ccCCCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcccc---c-cCC---CHHHHhh-------cCCEEEEecC
Q 021388 141 KFTGKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNLKY---K-YYP---SVVELAS-------NCHILVVACP 204 (313)
Q Consensus 141 ~l~g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~---~-~~~---~l~e~~~-------~aDvV~~~lp 204 (313)
.+.||++.|.| .|.||+.+++.|...|++|++.+|+.+..... . ... +++++++ ..|+++.+..
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 90 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG 90 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 47889998887 47899999999999999999998876532211 1 111 2333333 5799988764
No 473
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=94.19 E-value=0.18 Score=44.49 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=68.0
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHH-HHhhcCCEEEEecCCChhhhcccCHHHHhc
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVV-ELASNCHILVVACPLTEETRHIINREVIDA 220 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~-e~~~~aDvV~~~lp~~~~t~~li~~~~l~~ 220 (313)
..+++|++||+-. ++.+.|+.. +++.++|+++............+ +++.+||+|++.-. .-..+-+ .++++.
T Consensus 114 ~~~~kV~vIG~~p---~l~~~l~~~-~~v~V~d~~p~~~~~~~~~~~~e~~~l~~~D~v~iTGs--TlvN~Ti-~~lL~~ 186 (249)
T 3npg_A 114 DEIKRIAIIGNMP---PVVRTLKEK-YEVYVFERNMKLWDRDTYSDTLEYHILPEVDGIIASAS--CIVNGTL-DMILDR 186 (249)
T ss_dssp SCCSEEEEESCCH---HHHHHHTTT-SEEEEECCSGGGCCSSEECGGGHHHHGGGCSEEEEETT--HHHHTCH-HHHHHH
T ss_pred cCCCEEEEECCCH---HHHHHHhcc-CCEEEEECCCcccCCCCCChhHHHhhhccCCEEEEEee--eeccCCH-HHHHHh
Confidence 3558999999987 788888877 89999999886422112222344 58999999987642 2222233 567888
Q ss_pred cCCCcEEEEcCCC-------------------ccccHHHHHHHHHhCCe
Q 021388 221 LGPKGVLINIGRG-------------------PHVDERELVSALVEGRL 250 (313)
Q Consensus 221 mk~ga~lIn~~rg-------------------~~vd~~al~~al~~~~l 250 (313)
.+++..+|=+|-. .+.|.+.+.+.++.|.-
T Consensus 187 ~~~~~~vvl~GPS~~~~P~~~~~~Gv~~l~g~~v~d~~~~l~~i~~G~~ 235 (249)
T 3npg_A 187 AKKAKLIVITGPTGQLLPEFLKGTKVTHLASMKVTNIEKALVKLKLGSF 235 (249)
T ss_dssp CSSCSEEEEESGGGCSCGGGGTTSSCCEEEEEEESCHHHHHHHHHHTCH
T ss_pred CcccCeEEEEecCchhhHHHHhhCCccEEEEEEecCHHHHHHHHHcccc
Confidence 8887765544421 24577778888877753
No 474
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=94.18 E-value=0.15 Score=46.32 Aligned_cols=117 Identities=16% Similarity=0.220 Sum_probs=73.7
Q ss_pred HHHHhhCCCccEEEEcCcCCCcCChhhhhhcCcEEEcCC-CCC---hHHHHHHHHHHHHHHHhchhHHHHHHhcCCCCCC
Q 021388 59 AELIDALPKLEIVSSFSVGLDKVDMVKCKEKGVRVTNTP-DVL---TDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKG 134 (313)
Q Consensus 59 ~~~l~~~~~Lk~i~~~~~G~d~id~~~~~~~gI~v~n~~-~~~---~~~vAE~al~~~L~~~r~~~~~~~~~~~~~w~~~ 134 (313)
..++.++- -.|......-..+. ..+.-.+|+|.|.. |.. ..+.|+. +.+.+++
T Consensus 90 arvls~~~--D~iviR~~~~~~~~-~lA~~~~vPVINag~g~~~HPtQ~LaDl-----~Ti~e~~--------------- 146 (306)
T 4ekn_B 90 IRVISGYA--DIIVLRHPSEGAAR-LASEYSQVPIINAGDGSNQHPTQTLLDL-----YTIMREI--------------- 146 (306)
T ss_dssp HHHHHHHC--SEEEEECSSTTHHH-HHHHHCSSCEEESCSSSSCCHHHHHHHH-----HHHHHHH---------------
T ss_pred HHHHHHhC--cEEEEEcCChHHHH-HHHHhCCCCEEeCCCCCCcCcHHHHHHH-----HHHHHHh---------------
Confidence 34555553 34444443322221 23344689999984 333 3444443 3332221
Q ss_pred CcccccccCCCEEEEEcC---ChHHHHHHHHHHhC-CCCEEEecCCCCCc----------ccc--ccCCCHHHHhhcCCE
Q 021388 135 DYKLTTKFTGKTVGIIGL---GRIGMAVAKRAEAF-SCPINYYSRTEKPN----------LKY--KYYPSVVELASNCHI 198 (313)
Q Consensus 135 ~~~~~~~l~g~~igiiG~---G~iG~~iA~~l~~~-G~~V~~~~~~~~~~----------~~~--~~~~~l~e~~~~aDv 198 (313)
| .+.|.+|+++|= |++.++++..+..+ |++|.+..|..-.. .+. ....++++.++++|+
T Consensus 147 ----g-~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDv 221 (306)
T 4ekn_B 147 ----G-RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDV 221 (306)
T ss_dssp ----S-CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSE
T ss_pred ----C-CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCE
Confidence 1 378999999997 58999999999999 99999887743211 122 235689999999999
Q ss_pred EEEec
Q 021388 199 LVVAC 203 (313)
Q Consensus 199 V~~~l 203 (313)
|....
T Consensus 222 vy~~~ 226 (306)
T 4ekn_B 222 LYVTR 226 (306)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 98643
No 475
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.17 E-value=0.054 Score=49.81 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=32.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEK 178 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~ 178 (313)
.|.+|.|+|.|.+|...++.++..|+ +|++.+++++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~ 202 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKH 202 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHH
Confidence 47889999999999999999999999 7999988764
No 476
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.16 E-value=0.055 Score=49.89 Aligned_cols=30 Identities=27% Similarity=0.276 Sum_probs=24.3
Q ss_pred CEEEEEcCChHHHHHHHHHHhC---CCCEEEec
Q 021388 145 KTVGIIGLGRIGMAVAKRAEAF---SCPINYYS 174 (313)
Q Consensus 145 ~~igiiG~G~iG~~iA~~l~~~---G~~V~~~~ 174 (313)
.+|||+|+|.||+.+.+.|... .++|.+.+
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain 33 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIN 33 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 3799999999999999998754 47776553
No 477
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=94.15 E-value=0.17 Score=48.03 Aligned_cols=90 Identities=9% Similarity=0.101 Sum_probs=64.4
Q ss_pred cCCCEEEEEc-----CCh---HHHHHHHHHHhCCCCEEEecCCCCC-c-------------cc--cccCCCHHHHhhcCC
Q 021388 142 FTGKTVGIIG-----LGR---IGMAVAKRAEAFSCPINYYSRTEKP-N-------------LK--YKYYPSVVELASNCH 197 (313)
Q Consensus 142 l~g~~igiiG-----~G~---iG~~iA~~l~~~G~~V~~~~~~~~~-~-------------~~--~~~~~~l~e~~~~aD 197 (313)
+.|++|+++| +|. +.++++..+..+|++|.+..|..-. . .| +....++++.++++|
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 8899999997 354 9999999999999999998875421 1 12 133578999999999
Q ss_pred EEEEecCCC---------------hh----------------hhcccCHHHHhccCC-CcEEEEcC
Q 021388 198 ILVVACPLT---------------EE----------------TRHIINREVIDALGP-KGVLINIG 231 (313)
Q Consensus 198 vV~~~lp~~---------------~~----------------t~~li~~~~l~~mk~-ga~lIn~~ 231 (313)
+|..-+-.. +. ...-++.+.++.+|+ +++|.-+.
T Consensus 266 VVytd~W~sm~~Q~ER~~~~~~g~~~~~~~~~~~~~~~~~~~~~y~vt~elm~~ak~~dai~MHcL 331 (418)
T 2yfk_A 266 VVYPKSWAPFAAMEKRTELYGNGDQAGIDQLEQELLSQNKKHKDWECTEELMKTTKDGKALYMHCL 331 (418)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHGGGTTCCBCHHHHHTSGGGCCEECCCS
T ss_pred EEEEccccchhHHHHHhhhhccccchhhhhhhhhhhhHHHHHhhcCCCHHHHHhcCCCCeEEECCC
Confidence 998854211 00 112457788888875 77777665
No 478
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.13 E-value=0.031 Score=50.91 Aligned_cols=84 Identities=18% Similarity=0.204 Sum_probs=56.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCc-----cccc----c-C-CCHHHHhh-----cCCEEEEecCC
Q 021388 143 TGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPN-----LKYK----Y-Y-PSVVELAS-----NCHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~-----~~~~----~-~-~~l~e~~~-----~aDvV~~~lp~ 205 (313)
.|+++.|.|. |.||..+++.++..|++|++.+++.+.. .+.. . . .++.+.+. ..|+++.+...
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 5789999998 9999999999999999999998765321 1111 0 1 23333332 36777776652
Q ss_pred ChhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 206 TEETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 206 ~~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
.+ -...+..++++..++.++-
T Consensus 225 --~~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 225 --EF----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp --HH----HHHHHTTEEEEEEEEECCC
T ss_pred --HH----HHHHHHHHhcCCEEEEEec
Confidence 11 2556677788888877764
No 479
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.11 E-value=0.039 Score=50.52 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=56.1
Q ss_pred CCCEEEEEcCC-hHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccc-----cCCCHHHHh------hcCCEEEEecCC
Q 021388 143 TGKTVGIIGLG-RIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYK-----YYPSVVELA------SNCHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG~G-~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~-----~~~~l~e~~------~~aDvV~~~lp~ 205 (313)
.|++|.|+|.| .+|..+++.++..|++|++.+++.++.. +.. ...++.+.+ ...|+|+-++..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 57899999998 9999999999999999999988765321 111 012232221 146777776652
Q ss_pred ChhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 206 TEETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 206 ~~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
. .+ .+.+..++++..++.+|-
T Consensus 224 ~-~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 224 P-DG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp H-HH-----HHHHHTEEEEEEEEECCC
T ss_pred h-hH-----HHHHHHhcCCCEEEEEee
Confidence 2 11 234467788888888764
No 480
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.08 E-value=0.028 Score=51.90 Aligned_cols=84 Identities=19% Similarity=0.163 Sum_probs=55.5
Q ss_pred CCCEEEEE-cCChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccc-----cCCCHHHHhh-----cCCEEEEecCCC
Q 021388 143 TGKTVGII-GLGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYK-----YYPSVVELAS-----NCHILVVACPLT 206 (313)
Q Consensus 143 ~g~~igii-G~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~-----~~~~l~e~~~-----~aDvV~~~lp~~ 206 (313)
.|++|.|+ |.|.+|..+++.++..|++|++.++++++.. +.. ...++.+.+. ..|+|+.++...
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~ 246 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH
Confidence 57899999 6899999999999999999999998764321 111 0122322222 367777666521
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 207 EETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
.-...+..++++..++.++.
T Consensus 247 ------~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 247 ------YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp ------GHHHHHHTEEEEEEEEECCC
T ss_pred ------HHHHHHHHhccCCEEEEEEe
Confidence 12445667777777777763
No 481
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=94.06 E-value=0.051 Score=47.73 Aligned_cols=38 Identities=18% Similarity=0.145 Sum_probs=32.9
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.+.||++.|.|. |.||+.+++.|...|++|.+.+|+.+
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLE 42 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHH
Confidence 367899999975 78999999999999999999988653
No 482
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=94.06 E-value=0.39 Score=44.61 Aligned_cols=89 Identities=8% Similarity=0.007 Sum_probs=63.0
Q ss_pred cCCCE--EEEEcC---C--hHHHHHHHHHHhCCCCEEEecCC-CCCcc----------------ccccCCCHHHHhhcCC
Q 021388 142 FTGKT--VGIIGL---G--RIGMAVAKRAEAFSCPINYYSRT-EKPNL----------------KYKYYPSVVELASNCH 197 (313)
Q Consensus 142 l~g~~--igiiG~---G--~iG~~iA~~l~~~G~~V~~~~~~-~~~~~----------------~~~~~~~l~e~~~~aD 197 (313)
+.|++ |+++|= | ++.++++..+..+|++|.+..|. .-... .+....+++|.++++|
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aD 267 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGAD 267 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCS
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCC
Confidence 78999 999997 3 89999999999999999988876 22111 1223468999999999
Q ss_pred EEEEecCCChh---------------hhcccCHHHHhccCCCcEEEEcC
Q 021388 198 ILVVACPLTEE---------------TRHIINREVIDALGPKGVLINIG 231 (313)
Q Consensus 198 vV~~~lp~~~~---------------t~~li~~~~l~~mk~ga~lIn~~ 231 (313)
+|..-.-..+. ....++.+.++.+| +++|.-+.
T Consensus 268 vVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 268 VVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp EEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred EEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 99876532210 11235667777777 77766654
No 483
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.05 E-value=0.082 Score=47.67 Aligned_cols=60 Identities=10% Similarity=0.092 Sum_probs=44.0
Q ss_pred CEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCcc-----ccc-------cCCCHHHHhhcCCEEEEecC
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPNL-----KYK-------YYPSVVELASNCHILVVACP 204 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~-----~~~-------~~~~l~e~~~~aDvV~~~lp 204 (313)
++|.|.| .|.||+.+++.|...|++|.+.+|+..... +.. ...++.++++.+|+|+.+..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 5899998 599999999999999999999998765321 111 11235567888999877664
No 484
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=94.04 E-value=0.12 Score=46.13 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=43.3
Q ss_pred CCEEEEEc-CChHHHHHHHHHHhCCCCEEEecC-CCCC---c------c----cc-------ccCCCHHHHhhcCCEEEE
Q 021388 144 GKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSR-TEKP---N------L----KY-------KYYPSVVELASNCHILVV 201 (313)
Q Consensus 144 g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~-~~~~---~------~----~~-------~~~~~l~e~~~~aDvV~~ 201 (313)
||+|.|.| .|.||+.+++.|...|++|.+..| ++.. . . .. ....+++++++.+|+|+.
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 67899998 699999999999999999998877 4321 0 0 00 112346678889999877
Q ss_pred ec
Q 021388 202 AC 203 (313)
Q Consensus 202 ~l 203 (313)
+.
T Consensus 81 ~A 82 (322)
T 2p4h_X 81 TA 82 (322)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 485
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.03 E-value=0.039 Score=50.62 Aligned_cols=85 Identities=20% Similarity=0.232 Sum_probs=54.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhC--CCCEEEecCCCCCcc-----ccccCCCH-------HHHhh--cCCEEEEecCCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAF--SCPINYYSRTEKPNL-----KYKYYPSV-------VELAS--NCHILVVACPLT 206 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~--G~~V~~~~~~~~~~~-----~~~~~~~l-------~e~~~--~aDvV~~~lp~~ 206 (313)
.|++|.|+|.|.+|...++.++.+ |++|++.++++++.. ++....+. +++.. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 688999999999999999999999 999999998754321 22111111 11111 467777766532
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 207 EETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
. + + +..+..++++..++.++.
T Consensus 250 ~-~---~-~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 250 E-T---T-YNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp H-H---H-HHHHHHEEEEEEEEECCC
T ss_pred H-H---H-HHHHHHhhcCCEEEEeCC
Confidence 1 1 1 345566677777776653
No 486
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.03 E-value=0.072 Score=48.52 Aligned_cols=65 Identities=12% Similarity=0.097 Sum_probs=48.3
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCc----------------cccc-------cCCCHHHHhhcC
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPN----------------LKYK-------YYPSVVELASNC 196 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~----------------~~~~-------~~~~l~e~~~~a 196 (313)
.+.+++|.|.|. |.||+.+++.|...|++|.+.+|+.... .... ...+++++++.+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 477899999998 9999999999999999999998865310 1111 012355678889
Q ss_pred CEEEEecCC
Q 021388 197 HILVVACPL 205 (313)
Q Consensus 197 DvV~~~lp~ 205 (313)
|+|+.+...
T Consensus 104 d~vih~A~~ 112 (352)
T 1sb8_A 104 DYVLHQAAL 112 (352)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCcc
Confidence 998877653
No 487
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=94.03 E-value=0.12 Score=47.22 Aligned_cols=35 Identities=20% Similarity=0.135 Sum_probs=29.2
Q ss_pred CCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 144 GKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 144 g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
+++|.|.| .|.||+.+++.|...|++|.+.+|+..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRAS 36 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 47899998 599999999999999999999988653
No 488
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.98 E-value=0.22 Score=44.69 Aligned_cols=105 Identities=15% Similarity=0.151 Sum_probs=70.0
Q ss_pred cCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCC--CccccccCCCHHHHhhcCCEEEEecCCChh----------h
Q 021388 142 FTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEK--PNLKYKYYPSVVELASNCHILVVACPLTEE----------T 209 (313)
Q Consensus 142 l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~--~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~----------t 209 (313)
+.|++|.|+|....-...++.|...|++|..+..+.. ...+.....++.+.++++|+|+...|.... .
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccccC
Confidence 6788999999999999999999999999987643221 112222334566778899998864332110 1
Q ss_pred hcccCHHHHhccCCCcEEEEcCCCccccHHHHHHHHHhCCee
Q 021388 210 RHIINREVIDALGPKGVLINIGRGPHVDERELVSALVEGRLG 251 (313)
Q Consensus 210 ~~li~~~~l~~mk~ga~lIn~~rg~~vd~~al~~al~~~~l~ 251 (313)
...++++.++.+++..++. ++ +|.-++.+++.+.++.
T Consensus 83 ~~~~~~~~l~~~~~l~~i~-~G----~d~id~~~~~~~~gi~ 119 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNHCVVY-SG----ISNTYLNQCMKKTNRT 119 (293)
T ss_dssp CCBCCHHHHHTSCTTCEEE-ES----SCCHHHHHHHHHHTCE
T ss_pred CccchHHHHHhCCCCCEEE-ec----CCCHHHHHHHHHcCCe
Confidence 1236788999998877766 32 3566665566666665
No 489
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=93.95 E-value=0.033 Score=48.78 Aligned_cols=61 Identities=11% Similarity=0.196 Sum_probs=45.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCcc--ccc-------cCCCHHHHhhcCCEEEEecCC
Q 021388 145 KTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPNL--KYK-------YYPSVVELASNCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~~--~~~-------~~~~l~e~~~~aDvV~~~lp~ 205 (313)
++|.|.|. |.||+.+++.|...|++|.+.+|++.... +.. ...++.++++..|+|+.+...
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 57899987 99999999999999999999998765321 111 112356678889999877643
No 490
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=93.95 E-value=0.048 Score=50.00 Aligned_cols=66 Identities=20% Similarity=0.251 Sum_probs=48.9
Q ss_pred cccCCCEEEEEc-CChHHHHHHHHHHhC-CC-CEEEecCCCCCc---------ccc-------ccCCCHHHHhhcCCEEE
Q 021388 140 TKFTGKTVGIIG-LGRIGMAVAKRAEAF-SC-PINYYSRTEKPN---------LKY-------KYYPSVVELASNCHILV 200 (313)
Q Consensus 140 ~~l~g~~igiiG-~G~iG~~iA~~l~~~-G~-~V~~~~~~~~~~---------~~~-------~~~~~l~e~~~~aDvV~ 200 (313)
..+.|++|.|.| .|.||+.+++.|... |+ +|.+++|++... ... ....++.++++..|+|+
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vi 96 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICI 96 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEE
Confidence 347899999998 599999999999988 98 899999875321 111 11123556788999998
Q ss_pred EecCC
Q 021388 201 VACPL 205 (313)
Q Consensus 201 ~~lp~ 205 (313)
.+...
T Consensus 97 h~Aa~ 101 (344)
T 2gn4_A 97 HAAAL 101 (344)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 77653
No 491
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=93.94 E-value=0.066 Score=46.72 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=30.4
Q ss_pred cccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 140 TKFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 140 ~~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.++.||++.|.|. |.||+++|+.|...|++|++.+++.+
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 44 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE 44 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH
Confidence 4688999999985 78999999999999999999988543
No 492
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.93 E-value=0.087 Score=48.20 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=34.0
Q ss_pred cccCCCEEEEEc-CChHHHHHHHHHHh--CCCCEEEecCCCC
Q 021388 140 TKFTGKTVGIIG-LGRIGMAVAKRAEA--FSCPINYYSRTEK 178 (313)
Q Consensus 140 ~~l~g~~igiiG-~G~iG~~iA~~l~~--~G~~V~~~~~~~~ 178 (313)
.++.+++|.|.| .|.||+.+++.|.. .|++|.+.+|...
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 357899999995 59999999999998 8999999988553
No 493
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.93 E-value=0.072 Score=48.88 Aligned_cols=36 Identities=28% Similarity=0.411 Sum_probs=33.0
Q ss_pred CCCEEEEE-cCChHHHHHHHHHHhCCCCEEEecCCCC
Q 021388 143 TGKTVGII-GLGRIGMAVAKRAEAFSCPINYYSRTEK 178 (313)
Q Consensus 143 ~g~~igii-G~G~iG~~iA~~l~~~G~~V~~~~~~~~ 178 (313)
.|++|.|+ |.|.+|...++.++.+|++|++.+++++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~ 186 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNE 186 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 68999999 7999999999999999999999988654
No 494
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=93.92 E-value=0.25 Score=43.00 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=34.0
Q ss_pred ccCCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCC
Q 021388 141 KFTGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKP 179 (313)
Q Consensus 141 ~l~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~ 179 (313)
++.||++.|.|. |.||+.+|+.|...|++|++.+|+.+.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 43 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPA 43 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 578999999986 789999999999999999999987653
No 495
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.92 E-value=0.037 Score=51.32 Aligned_cols=85 Identities=16% Similarity=0.135 Sum_probs=55.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHhCCC-CEEEecCCCCCcc-----cccc-----CCCHHHHhh-----cCCEEEEecCCC
Q 021388 143 TGKTVGIIGLGRIGMAVAKRAEAFSC-PINYYSRTEKPNL-----KYKY-----YPSVVELAS-----NCHILVVACPLT 206 (313)
Q Consensus 143 ~g~~igiiG~G~iG~~iA~~l~~~G~-~V~~~~~~~~~~~-----~~~~-----~~~l~e~~~-----~aDvV~~~lp~~ 206 (313)
.|++|.|+|.|.+|...++.++.+|+ +|++.++++++.. ++.. ..++.+.+. ..|+|+-++...
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 57899999999999999999999999 5888887654321 2110 123322221 367777766521
Q ss_pred hhhhcccCHHHHhccCCCcEEEEcCC
Q 021388 207 EETRHIINREVIDALGPKGVLINIGR 232 (313)
Q Consensus 207 ~~t~~li~~~~l~~mk~ga~lIn~~r 232 (313)
.+ -+..+..++++..++.++-
T Consensus 270 -~~----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 270 -EI----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp -HH----HHHHHHTEEEEEEEEECCC
T ss_pred -HH----HHHHHHHHhcCCEEEEeCC
Confidence 11 1445677778877777764
No 496
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=93.91 E-value=0.16 Score=45.28 Aligned_cols=83 Identities=12% Similarity=0.243 Sum_probs=55.2
Q ss_pred ccCCCEEEEEcCChHHHHHHHHHHhCCCCEEEecCCCCCccccccCCCHHHHhhcCCEEEEecCCChhhhcccCHHHHhc
Q 021388 141 KFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDA 220 (313)
Q Consensus 141 ~l~g~~igiiG~G~iG~~iA~~l~~~G~~V~~~~~~~~~~~~~~~~~~l~e~~~~aDvV~~~lp~~~~t~~li~~~~l~~ 220 (313)
...|++|++||+- +..+.++.-++++.+++++++... ......++++.+||+|++.-. .-..+-+ ..+|+.
T Consensus 138 ~~~g~kV~vIG~f----P~i~~~~~~~~~l~V~E~~p~~g~--~p~~~~~~~lp~~D~viiTgs--tlvN~Tl-~~lL~~ 208 (270)
T 3l5o_A 138 EVKGKKVGVVGHF----PHLESLLEPICDLSILEWSPEEGD--YPLPASEFILPECDYVYITCA--SVVDKTL-PRLLEL 208 (270)
T ss_dssp TTTTSEEEEESCC----TTHHHHHTTTSEEEEEESSCCTTC--EEGGGHHHHGGGCSEEEEETH--HHHHTCH-HHHHHH
T ss_pred ccCCCEEEEECCc----hhHHHHHhcCCCEEEEECCCCCCC--CChhHHHHhhccCCEEEEEee--hhhcCCH-HHHHhh
Confidence 4689999999985 455667777899999999875322 112234568899999887642 1111222 567787
Q ss_pred cCCCcEEEEcCC
Q 021388 221 LGPKGVLINIGR 232 (313)
Q Consensus 221 mk~ga~lIn~~r 232 (313)
.|+...+|=+|-
T Consensus 209 ~~~a~~vvl~GP 220 (270)
T 3l5o_A 209 SRNARRITLVGP 220 (270)
T ss_dssp TTTSSEEEEEST
T ss_pred CCCCCEEEEECC
Confidence 887776665553
No 497
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=93.90 E-value=0.25 Score=46.56 Aligned_cols=63 Identities=11% Similarity=0.147 Sum_probs=48.8
Q ss_pred ccCCCEEEEEcC-----C---hHHHHHHHHHHhCCCCEEEecCCCCC-c-------------cc--cccCCCHHHHhhcC
Q 021388 141 KFTGKTVGIIGL-----G---RIGMAVAKRAEAFSCPINYYSRTEKP-N-------------LK--YKYYPSVVELASNC 196 (313)
Q Consensus 141 ~l~g~~igiiG~-----G---~iG~~iA~~l~~~G~~V~~~~~~~~~-~-------------~~--~~~~~~l~e~~~~a 196 (313)
.|.|++|+++|- | ++.++++..+..+|++|.+..|..-. . .+ +....++++.++.+
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~a 267 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA 267 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTC
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCC
Confidence 478999999973 4 78899999999999999988875321 1 01 12357899999999
Q ss_pred CEEEEec
Q 021388 197 HILVVAC 203 (313)
Q Consensus 197 DvV~~~l 203 (313)
|+|..-+
T Consensus 268 DvVytd~ 274 (399)
T 3q98_A 268 DIVYPKS 274 (399)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9998765
No 498
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.89 E-value=0.021 Score=52.15 Aligned_cols=85 Identities=18% Similarity=0.180 Sum_probs=56.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHhCCCCEEEecCCCCCc------ccccc-----CCCHHHHh-----hcCCEEEEecCC
Q 021388 143 TGKTVGIIGL-GRIGMAVAKRAEAFSCPINYYSRTEKPN------LKYKY-----YPSVVELA-----SNCHILVVACPL 205 (313)
Q Consensus 143 ~g~~igiiG~-G~iG~~iA~~l~~~G~~V~~~~~~~~~~------~~~~~-----~~~l~e~~-----~~aDvV~~~lp~ 205 (313)
.|++|.|+|. |.||..+++.++..|++|++.++++++. .+... ..++.+.+ ...|+|+.+...
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 5789999999 9999999999999999999998765421 12110 11222222 136777766542
Q ss_pred ChhhhcccCHHHHhccCCCcEEEEcCCC
Q 021388 206 TEETRHIINREVIDALGPKGVLINIGRG 233 (313)
Q Consensus 206 ~~~t~~li~~~~l~~mk~ga~lIn~~rg 233 (313)
. .-...+..++++..++.++..
T Consensus 229 --~----~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 229 --E----ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp --H----HHHHHHTTEEEEEEEEECCCG
T ss_pred --c----hHHHHHHHHhhCCEEEEEeec
Confidence 1 124566777777777777643
No 499
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=93.87 E-value=0.16 Score=45.76 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=44.7
Q ss_pred CCEEEEEc-CChHHHHHHHHHHhCCCCEEEecCCCCCc------------ccc-------ccCCCHHHHhhcCCEEEEec
Q 021388 144 GKTVGIIG-LGRIGMAVAKRAEAFSCPINYYSRTEKPN------------LKY-------KYYPSVVELASNCHILVVAC 203 (313)
Q Consensus 144 g~~igiiG-~G~iG~~iA~~l~~~G~~V~~~~~~~~~~------------~~~-------~~~~~l~e~~~~aDvV~~~l 203 (313)
+++|.|.| .|.||+.+++.|...|++|.+..|+.... ... ....+++++++.+|+|+.+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 68999999 79999999999999999999876654311 011 11235677888999987654
No 500
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.86 E-value=0.18 Score=45.90 Aligned_cols=95 Identities=16% Similarity=0.241 Sum_probs=61.0
Q ss_pred CEEEEEc-CChHHHHHHHHHHh---CCCCEEEecCCCCCccc---------c--ccC----CCHHHHhhcCCEEEEecCC
Q 021388 145 KTVGIIG-LGRIGMAVAKRAEA---FSCPINYYSRTEKPNLK---------Y--KYY----PSVVELASNCHILVVACPL 205 (313)
Q Consensus 145 ~~igiiG-~G~iG~~iA~~l~~---~G~~V~~~~~~~~~~~~---------~--~~~----~~l~e~~~~aDvV~~~lp~ 205 (313)
++|+|+| .|.+|..++..|.. +.-++..+|..+. ..+ . ... .+..+.+++||+|+++.+.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~-~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~ 79 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV 79 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT-HHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC-chhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence 4899999 99999999999974 3457899998762 111 1 111 2456789999999998753
Q ss_pred C--h-hhhc-cc--C----H---HHHhccCCCcEEEEcCCCccccHHHHH
Q 021388 206 T--E-ETRH-II--N----R---EVIDALGPKGVLINIGRGPHVDERELV 242 (313)
Q Consensus 206 ~--~-~t~~-li--~----~---~~l~~mk~ga~lIn~~rg~~vd~~al~ 242 (313)
. | .++. ++ | + +.+....|++++++++ +.+|.-..+
T Consensus 80 ~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 80 ARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 2 2 1111 11 1 1 1223346889999995 566665554
Done!