BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021390
(313 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 134/246 (54%), Gaps = 6/246 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
IM A++ + PV+LELGGK +V +DVD+ VA+ V ++GQ C+ R VH
Sbjct: 246 IMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHES 305
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
I FV ++ K +++ PL +G + +K+ N ++ A +GA IL G
Sbjct: 306 IAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRR 365
Query: 122 -GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
HL +G + PT+I +V +M++ +EE FGP++ + F+T+EE + LAND+ YGLG
Sbjct: 366 PEHLKKG---YFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAINLANDTHYGLG 422
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 240
AV S R ++ +Q G+ IN +++ P+GG+K SGFGR G GL
Sbjct: 423 SAVMSNDLERCERLSKALQAGIVWINCAQPSFI--QAPWGGIKRSGFGRELGEWGLENYL 480
Query: 241 LVKSVV 246
VK V
Sbjct: 481 SVKQVT 486
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 133/247 (53%), Gaps = 6/247 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
IM A++ + PV+LELGGK +V +DVD+ A+ A+ ++GQ C+ R +H
Sbjct: 246 IMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHES 305
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
I F++++ K +K++ PL +G + EK+ V++A +GA IL GS
Sbjct: 306 IATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSR 365
Query: 122 G-HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
HL +G + PT+I +V M++ +EE FGP++ + F+T+EE + LAND+ YGLG
Sbjct: 366 PEHLKKGF---FIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLG 422
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 240
AV S R + + G+ +N S P+GGVK SGFGR G GL
Sbjct: 423 AAVISNDLERCERVTKAFKAGIVWVN--CSQPCFTQAPWGGVKRSGFGRELGEWGLDNYL 480
Query: 241 LVKSVVE 247
VK V +
Sbjct: 481 SVKQVTQ 487
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 134/248 (54%), Gaps = 6/248 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
+M +A++ + PVTLELGGK +V +DVD+ V + + ++GQ C+ R VH
Sbjct: 243 VMASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHES 302
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
I A FV ++ K K++ P +G + +K+ ++ A +GA IL GS
Sbjct: 303 IAAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSR 362
Query: 122 G-HLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
HL +G Y PT++ +++ +M++ +EE FGP++ + F++++E + LAND+ YGL
Sbjct: 363 PEHLKKG---YYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSEDEAIALANDTEYGLA 419
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 240
AVFS R I ++ G +N S P+GG+K SGFGR G G++
Sbjct: 420 AAVFSNDLERCERITKALEVGAVWVN--CSQPCFVQAPWGGIKRSGFGRELGEWGIQNYL 477
Query: 241 LVKSVVED 248
+K V +D
Sbjct: 478 NIKQVTQD 485
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 130/245 (53%), Gaps = 2/245 (0%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
IM+NA+ +T + LELGGK+ I+ DD D A+ +GQ C+ R V
Sbjct: 265 IMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNS 324
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
I F + VK + G +MG + EH K+++ ++ A +GA I G
Sbjct: 325 IKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKR 384
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 181
+ +F PTVI N + +M+++QEE FGP++ + F T++E ++LANDS YGL
Sbjct: 385 PDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAG 444
Query: 182 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 241
AVFS +A+ +A +++ G INDF Y Q+ P+GG K SG GR G EGL +
Sbjct: 445 AVFSKDIGKAQRVANKLKLGTVWINDFHP-YFAQA-PWGGYKQSGIGRELGKEGLEEYLV 502
Query: 242 VKSVV 246
K ++
Sbjct: 503 SKHIL 507
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 132/248 (53%), Gaps = 7/248 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVD-VPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
IM A++ + PV+LELGGK +V DD+D + A+ + ++GQ C+ R V
Sbjct: 259 IMTAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQE 318
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
+I + F+ ++ K K++ PL +G + EK+ +++A +GA IL G
Sbjct: 319 NIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGE 378
Query: 121 F-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
HL +G Y PT+I +VN +M++ +EE FGP++ + F T+E+ ++LAND++YGL
Sbjct: 379 RPQHLKKG---YYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGL 435
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 239
G AV S R Q G+ IN S LP+GG K SGFGR G GL
Sbjct: 436 GAAVMSKDVKRCERFTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENF 493
Query: 240 CLVKSVVE 247
+K V E
Sbjct: 494 LNIKQVTE 501
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 136/247 (55%), Gaps = 6/247 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
IM +A+ + PVTLELGGK +V DDVD+ + + ++GQ C+ R +H
Sbjct: 263 IMASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTK 322
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG-S 120
I F ++ K++ PL +G + EK++ +++A +GA IL G
Sbjct: 323 IAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVR 382
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
HL +G + PT+I ++ +M++ +EE FGP++ + +F+T++E ++LAND++YGL
Sbjct: 383 PAHLEKGF---FIEPTIITDITTSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLA 439
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 240
AV SG + R + ++ +I G +N + CQ+ P+GG K SGFGR G G+
Sbjct: 440 GAVISGDRERCQRLSEEIDAGCIWVN-CSQPCFCQA-PWGGNKRSGFGRELGEGGIDNYL 497
Query: 241 LVKSVVE 247
VK V E
Sbjct: 498 SVKQVTE 504
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 131/248 (52%), Gaps = 7/248 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVD-VPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
IM A++ + PV+L LGGK +V DD+D + A+ + ++GQ C+ R V
Sbjct: 259 IMTAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQE 318
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
+I + F+ ++ K K++ PL +G + EK+ +++A +GA IL G
Sbjct: 319 NIASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGE 378
Query: 121 F-GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
HL +G Y PT+I +VN +M++ +EE FGP++ + F T+E+ ++LAND++YGL
Sbjct: 379 RPQHLKKG---YYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFKTEEQAIELANDTKYGL 435
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 239
G AV S R Q G+ IN S LP+GG K SGFGR G GL
Sbjct: 436 GAAVMSKDVKRCERFTKAFQTGIIWIN--CSQPTFNELPWGGKKRSGFGRDLGKWGLENF 493
Query: 240 CLVKSVVE 247
+K V E
Sbjct: 494 LNIKQVTE 501
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 130/244 (53%), Gaps = 8/244 (3%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
++M ++ T+ +TLELGG FIV DD D+ + A+ + +++GQ C RF+VH
Sbjct: 242 LLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHE 301
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
+Y F ++A V + G +G L +K+++ + DAL KGA ++ G
Sbjct: 302 RVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGK 361
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
L G +F PTV+ V M + +EE FGP+ P+ +F ++EE+V+LAND+ +GL
Sbjct: 362 RHALGHG----FFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLA 417
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 239
++S R +A ++ G+ IN SN + PFGGVK SG GR G+
Sbjct: 418 AYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVA---PFGGVKQSGLGREGSHYGIDDY 474
Query: 240 CLVK 243
++K
Sbjct: 475 VVIK 478
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 133/246 (54%), Gaps = 7/246 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
+ R A++ L P TLELGGK A I+ +DVD+ + V + + ++GQ C R R
Sbjct: 240 VGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRS 299
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
Y V+ V V ++ GPP +G L + +++ + +++GA ++ G
Sbjct: 300 RYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG- 358
Query: 122 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
EG + +F PTV +V++ M + QEE FGP++ I+ ++T+E+ + +ANDS YGL
Sbjct: 359 --RPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLA 416
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 240
+V++ + +I+ QI+ G IN +A + PFGG K+SG GR G EG+
Sbjct: 417 GSVWTTDVPKGIKISQQIRTGTYGINWYAFD---PGSPFGGYKNSGIGRENGPEGVEHFT 473
Query: 241 LVKSVV 246
KSV+
Sbjct: 474 QQKSVL 479
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 124/245 (50%), Gaps = 6/245 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
I A+K V+LELGGK +IV DDVD+ A+ + ++GQ C R V
Sbjct: 234 IXEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNK 293
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
I F++++ + V G P +G + + +++QN +N +++GAE+ G
Sbjct: 294 IKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGP- 352
Query: 122 GHLSEGAVDQYFP-PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
EG YF PT+ +NV++ + QEE FGP+ ++ +N +E +++AND++YGL
Sbjct: 353 -GKPEGLEKGYFARPTIFINVDNQXTIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLA 411
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 240
V + ++A I+ G IN+ LPFGG K SG GR G G+
Sbjct: 412 GYVIGKDKETLHKVARSIEAGTVEINEAGRK---PDLPFGGYKQSGLGREWGDYGIEEFL 468
Query: 241 LVKSV 245
VKS+
Sbjct: 469 EVKSI 473
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 4/233 (1%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
+M ++KT+ VTLELGGK ++ D ++ + + A+ A + GQ C R +V R+
Sbjct: 249 VMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQRE 308
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
I F+ +V K K++ G PL + MG L +K+ V A +GA +L G
Sbjct: 309 IMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEP 368
Query: 122 GHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
S+ + + P V+ N M ++EE FGP+M ++ F+T+EEV++ AN++ +GL
Sbjct: 369 LTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGL 428
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 232
VF+ RA +AA ++ G IN ++ + + +PFGG K SGFGR G
Sbjct: 429 ASGVFTRDISRAHRVAANLEAGTCYINTYSISPV--EVPFGGYKMSGFGRENG 479
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 130/249 (52%), Gaps = 15/249 (6%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
I +NAS TL V LELGGK A I+ D D+ + Q VR +SGQ+C R V +
Sbjct: 256 ISKNASNTLKRVCLELGGKGANIIFADADIDAL-QRGVRHCFYNSGQSCNAPTRMLVEQA 314
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
IY + I + GP +G + E +K+Q+L+ +D+GA ++ G+
Sbjct: 315 IYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGT- 373
Query: 122 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
L G Y+ PTV +V M++ +EE FGP++ ++ FNT++E V LAND+ YGL
Sbjct: 374 -GLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLT 432
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLP----FGGVKDSGFGRFAGVEGL 236
+ S + + R IAAQ++ G+ +N LP FGGVK SG R G+ G+
Sbjct: 433 NYIQSQDRSKCRRIAAQVRSGMVEVNG-------HELPGGSYFGGVKFSGRAREGGLWGI 485
Query: 237 RACCLVKSV 245
+ K++
Sbjct: 486 KEFLDTKAI 494
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
+S +L VT+ELGGK I+ D D+ A IAV A SSGQ C R ++HR A
Sbjct: 241 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQAR 300
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
F ++V + V+ + G P + G L H E + + + A +L G ++
Sbjct: 301 FEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVT 358
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
+GA + Y PTV + M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V
Sbjct: 359 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 418
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
+ RA +++ G+ IN + + +P GG K SG GR G+ L +K
Sbjct: 419 VTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIK 476
Query: 244 SV 245
SV
Sbjct: 477 SV 478
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
+S +L VT+ELGGK I+ D D+ A IAV A SSGQ C R ++HR A
Sbjct: 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQAR 301
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
F ++V + V+ + G P + G L H E + + + A +L G ++
Sbjct: 302 FEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVT 359
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
+GA + Y PTV + M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
+ RA +++ G+ IN + + +P GG K SG GR G+ L +K
Sbjct: 420 VTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477
Query: 244 SV 245
SV
Sbjct: 478 SV 479
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 7/249 (2%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
++MRNA+ L ++ ELGGK +V D D+ V +G+ C + R V
Sbjct: 256 IVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEE 315
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I+ FV +V + +++ G PL + ++G L EH +++ V +GA +L G
Sbjct: 316 KIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGE 375
Query: 121 FGHLSEGAVD----QYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR 176
S D Y PTV V NH MK+ QEE FGP++ + F +EE ++ AND++
Sbjct: 376 RAKTSFRGEDLSRGNYLLPTVFVGENH-MKIAQEEIFGPVLVAIPFKDEEEALRKANDTK 434
Query: 177 YGLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 236
YGL VF+ RA +A +++ G+ +N + N PFGGVK SG R G L
Sbjct: 435 YGLAAYVFTRDLERAHRLALELEAGMVYLN--SHNVRHLPTPFGGVKGSGDRREGGTYAL 492
Query: 237 RACCLVKSV 245
+K++
Sbjct: 493 DFYTDLKTI 501
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 122/243 (50%), Gaps = 10/243 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
S L VTL+LGGK I+ D D+ + A A + GQ+C+ R +V DIY
Sbjct: 258 GSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDE 317
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI---- 373
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL AV
Sbjct: 374 --AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
F+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+A VK
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 244 SVV 246
+V
Sbjct: 490 TVT 492
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 131/237 (55%), Gaps = 9/237 (3%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
IM A+K +T V LELGGK IV DD D+ + V + + +SGQ C AER YV +
Sbjct: 237 IMATAAKNITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 119
IY FV+++ + +++V G P A + D MG L E+++ V A+++GA +
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV---- 351
Query: 120 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
+FG + Y+PPT++++V M +M EE FGP++P++ F+T E+ + +ANDS YGL
Sbjct: 352 AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGL 411
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 236
++++ + + A + ++ G IN N+ G + SG G G GL
Sbjct: 412 TSSIYTQNLNVAMKAIKGLKFGETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 131/237 (55%), Gaps = 9/237 (3%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
IM A+K +T V LELGGK IV DD D+ + V + + +SGQ C AER YV +
Sbjct: 237 IMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 119
IY FV+++ + +++V G P A + D MG L E+++ V A+++GA +
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV---- 351
Query: 120 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
+FG + Y+PPT++++V M +M EE FGP++P++ F+T E+ + +ANDS YGL
Sbjct: 352 AFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGL 411
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 236
++++ + + A + ++ G IN N+ G + SG G G GL
Sbjct: 412 TSSIYTQNLNVAMKAIKGLKFGETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
S L VTLELGGK I+ D D+ + A A + GQ C R +V DIY
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 317
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI---- 373
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL AV
Sbjct: 374 --AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
F+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+A VK
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 244 SVV 246
+V
Sbjct: 490 TVT 492
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
S L VTLELGGK I+ D D+ + A A + GQ C R +V DIY
Sbjct: 252 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 311
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 312 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI---- 367
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL AV
Sbjct: 368 --AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 425
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
F+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+A VK
Sbjct: 426 FTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVK 483
Query: 244 SVV 246
+V
Sbjct: 484 TVT 486
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
S L VTLELGGK I+ D D+ + A A + GQ C R +V DIY
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 317
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI---- 373
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL AV
Sbjct: 374 --AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
F+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+A VK
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEVK 489
Query: 244 SVV 246
+V
Sbjct: 490 TVT 492
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 6/242 (2%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
+S +L VT+ LGGK I+ D D+ A IAV A SSGQ C R ++HR A
Sbjct: 241 SSSSLKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQAR 300
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
F ++V + V+ + G P + G L H E + + + A +L G ++
Sbjct: 301 FEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVT 358
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
+GA + Y PTV + M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V
Sbjct: 359 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 418
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
+ RA +++ G+ IN + + +P GG K SG GR G+ L +K
Sbjct: 419 VTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIK 476
Query: 244 SV 245
SV
Sbjct: 477 SV 478
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 9/237 (3%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
IM A+K +T V LELGGK IV DD D+ + V + + +SGQ C AER YV +
Sbjct: 237 IMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYD--MGALCLLEHSEKLQNLVNDALDKGAEILARG 119
IY FV+++ + +++V G P A + D MG L E+++ V A+++GA + A G
Sbjct: 297 IYDQFVNRLGEAMQAVQFGNP-AERNDIAMGPLINAAALERVEQKVARAVEEGARV-ALG 354
Query: 120 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
G EG Y+PPT++++V M +M EE FGP++P++ F+T EE + +ANDS YGL
Sbjct: 355 --GKAVEGK-GYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGL 411
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 236
++++ + + A + ++ G IN N+ G + SG G G GL
Sbjct: 412 TSSIYTQNLNVAMKAIKGLKFGETYINR--ENFEAMQGFHAGWRKSGIGGADGKHGL 466
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 6/242 (2%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
+S +L VT+ELGGK I+ D D+ A IAV A SSGQ R ++HR A
Sbjct: 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQAR 301
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
F ++V + V+ + G P + G L H E + + + A +L G ++
Sbjct: 302 FEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVT 359
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
+GA + Y PTV + M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
+ RA +++ G+ IN + + +P GG K SG GR G+ L +K
Sbjct: 420 VTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477
Query: 244 SV 245
SV
Sbjct: 478 SV 479
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 6/242 (2%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
+S +L VT+ELGGK I+ D D+ A IAV A SSGQ R ++HR A
Sbjct: 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQAR 301
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
F ++V + V+ + G P + G L H E + + + A +L G ++
Sbjct: 302 FEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGE--RVT 359
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
+GA + Y PTV + M +++EE FGP+M I+ ++ ++E ++ AND+ YGL V
Sbjct: 360 DGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGV 419
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
+ RA +++ G+ IN + + +P GG K SG GR G+ L +K
Sbjct: 420 VTQDLARAHRAIHRLEAGICWINTWGES--PAEMPVGGYKQSGVGRENGLTTLAHYTRIK 477
Query: 244 SV 245
SV
Sbjct: 478 SV 479
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
S L VTLELGGK I+ D D+ + A A + GQ C R +V DIY
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 317
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI---- 373
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL AV
Sbjct: 374 --AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
F+ +A ++ +Q G +N + + QS PFGG K SG G+ G GL+A VK
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGQELGEYGLQAYTEVK 489
Query: 244 SVV 246
+V
Sbjct: 490 TVT 492
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 124/244 (50%), Gaps = 12/244 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYA 64
S L VTLELGGK I+ D D+ + A A + GQ +CAG+ R +V DIY
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYD 316
Query: 65 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 124
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 317 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI--- 373
Query: 125 SEGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 182
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL A
Sbjct: 374 ---AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAA 430
Query: 183 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 242
VF+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+A V
Sbjct: 431 VFTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEV 488
Query: 243 KSVV 246
K+V
Sbjct: 489 KTVT 492
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 8/238 (3%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
+ A K L T ELGG DAFIV DD D + + A + GQ C ++R V +
Sbjct: 217 VAEAAGKNLKKSTXELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKS 276
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
Y + ++ + ++ AG PL + + EKL+ V +A+D GA++ + +
Sbjct: 277 RYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQ--Y 334
Query: 122 GHL-SEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
+ S+GA +F PT++ ++ + +E FGPI + D ++LANDS YGLG
Sbjct: 335 PEIDSKGA---FFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLG 391
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
+V RA++++AQI+ G IN LPFGG+K SG+GR GL A
Sbjct: 392 SSVIGSDIDRAKKVSAQIETGXTVIN--GRWITSGELPFGGIKKSGYGRELSGLGLXA 447
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 120/235 (51%), Gaps = 5/235 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
++ + ++ + + LELGG FIV DD D+ A + + GQ C A R +VH
Sbjct: 242 LIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEK 301
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
+ F ++A+ V + G D+G L + +K++ + DALDKGA ++A
Sbjct: 302 VADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQP 361
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 181
L +G +FPPTV+ V+ QEE FGP++P F T+EEV+ ND+ +GL
Sbjct: 362 AELGDGL---FFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAGNDTEFGLAS 418
Query: 182 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL 236
VF+ RA+ +AA ++ G N PFGG K SG GR G+EGL
Sbjct: 419 YVFTADAERAQRVAAGLRFGHVGWN--TGTGPTPEAPFGGXKASGIGREGGLEGL 471
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 123/244 (50%), Gaps = 12/244 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYA 64
S L VTLELGGK I+ D D+ + A A + GQ CAG+ R +V DIY
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGS-RTFVQEDIYD 316
Query: 65 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 124
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 317 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI--- 373
Query: 125 SEGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 182
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL A
Sbjct: 374 ---AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAA 430
Query: 183 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLV 242
VF+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+A V
Sbjct: 431 VFTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQAYTEV 488
Query: 243 KSVV 246
K+V
Sbjct: 489 KTVT 492
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 119/229 (51%), Gaps = 8/229 (3%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
+M +K + V+LELGG FIV DD D+ + A+ + +++GQ C A R YV
Sbjct: 240 LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG 299
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
+Y F ++ + + + G L +G L + K++ + DAL+KGA ++ G
Sbjct: 300 VYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK- 358
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 181
H G +F PT++V+V K+ +EE FGP+ P+ +F + +V+ AND+ +GL
Sbjct: 359 AHERGG---NFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAA 415
Query: 182 AVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGR 229
++ R + ++ G+ IN SN + PFGG+K SG GR
Sbjct: 416 YFYARDLSRVFRVGEALEYGIVGINTGIISNEVA---PFGGIKASGLGR 461
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 119/229 (51%), Gaps = 8/229 (3%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
+M +K + V+LELGG FIV DD D+ + A+ + +++GQ C A R YV
Sbjct: 240 LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG 299
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
+Y F ++ + + + G L +G L + K++ + DAL+KGA ++ G
Sbjct: 300 VYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK- 358
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 181
H G +F PT++V+V K+ +EE FGP+ P+ +F + +V+ AND+ +GL
Sbjct: 359 AHERGG---NFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAA 415
Query: 182 AVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGR 229
++ R + ++ G+ IN SN + PFGG+K SG GR
Sbjct: 416 YFYARDLSRVFRVGEALEYGIVGINTGIISNEVA---PFGGIKASGLGR 461
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 116/235 (49%), Gaps = 10/235 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
S L VTLELGGK I+ D D+ + A A + GQ C R +V DIY
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDE 317
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI---- 373
Query: 126 EGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL AV
Sbjct: 374 --AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
F+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+A
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQA 484
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
L LELGG D FIV +D D+ + AV Q++GQ CA A+RF V I F +
Sbjct: 228 LKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDR 287
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
++ G PL + D+G + ++L V ++ +GA +L G EG
Sbjct: 288 FVAAAAALKXGDPLVEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGE-KIAGEG-- 344
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
Y+ TV+ +V ++E FGP+ I + LANDS +GL +F+
Sbjct: 345 -NYYAATVLADVTPDXTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT 403
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 249
A E AA+++CG IN ++++ + FGGVK SGFGR GL C V++V ++R
Sbjct: 404 LAAEXAARLECGGVFINGYSASDA--RVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 123/245 (50%), Gaps = 4/245 (1%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
I + +++ +TPV LELGGK +V DD D+ A+ A+ + GQ C ER YVH
Sbjct: 243 IYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHAS 302
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
+Y F+++ +VK + G P+ MG C + + ++V++A+ +GA + G
Sbjct: 303 VYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKT 362
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 181
+ ++ PTV+V+V ++ EE FGPI+PI+K ++ E+ ++ NDS YGL
Sbjct: 363 ATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSA 422
Query: 182 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPF-GGVKDSGFGRFAGVEGLRACC 240
V + S + + ++ G IN Q F G K SGFG G GL
Sbjct: 423 YVHTQSFANINQAISDLEVGEVYINRGMGE---QHQGFHNGWKQSGFGGEDGKFGLEQYL 479
Query: 241 LVKSV 245
K+V
Sbjct: 480 EKKTV 484
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 119/257 (46%), Gaps = 10/257 (3%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
+ A++ P LELGGKD IV + ++ + A+ ++GQ+C ER YV
Sbjct: 218 VAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAES 277
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
+ F Q+ + PL +G + + + + + + DA++KGA I G
Sbjct: 278 KFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKV 337
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 181
L G + PTV NVNH+ K+ EE FGPI P+ F EE V LAND+ YGL
Sbjct: 338 EELGGG---WWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSA 394
Query: 182 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGF-GRFAGVEGLR--- 237
AVF+GS+ A ++A Q+ G +IND A SG G G GL+
Sbjct: 395 AVFAGSEDEALKVARQLNAGAISINDAALTAXXHEGEKNAFNFSGLGGSRVGAAGLKRFL 454
Query: 238 ---ACCLVKSVVEDRWW 251
A + + D WW
Sbjct: 455 RKQAFLIKTNSTSDPWW 471
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 11/249 (4%)
Query: 1 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 59
+I A K+ L VTLE+GGK I+ D D+ + A A + GQ C R +V
Sbjct: 251 LIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ 310
Query: 60 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 119
DIYA FV + KS G P + + G +K+ + ++G ++L G
Sbjct: 311 EDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGG 370
Query: 120 SFGHLSEGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRY 177
A D+ + PTV ++ M + +EE FGP+M I+KF + EEVV AN+S+Y
Sbjct: 371 G------AAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKY 424
Query: 178 GLGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 237
GL AVF+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+
Sbjct: 425 GLAAAVFTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKLSGSGRELGEYGLQ 482
Query: 238 ACCLVKSVV 246
A VK+V
Sbjct: 483 AYTEVKTVT 491
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 13/232 (5%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
+ PV LELGGKD IV DD D+ A V A SGQ C +R +V + V+
Sbjct: 253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVAN 312
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
+ ++V+ ++ G P D+ + + + +Q L++DAL+ GA +L+ G+ +G
Sbjct: 313 IKELVEQLTVGSP-EDDADITPVIDEKSAAFIQGLIDDALENGATLLS----GNKRQG-- 365
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
PT++ +V M++ EE FGP++PI++ E + L+N S YGL ++F+
Sbjct: 366 -NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTD 424
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCL 241
RA I ++ G IN + PF GVK SG GV+G++ L
Sbjct: 425 RAINIGKHLEVGTVHIN-AKTERGPDHFPFLGVKKSGL----GVQGIKPSLL 471
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 120/236 (50%), Gaps = 12/236 (5%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQ-NCAGAERFYVHRDIYA 64
S L VTLELGGK I+ D D+ + A A + GQ +CAG+ R +V DIY
Sbjct: 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGS-RTFVQEDIYD 316
Query: 65 LFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHL 124
FV + KS G P K + G +K+ +N +GA++L G
Sbjct: 317 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGI--- 373
Query: 125 SEGAVDQ--YFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCA 182
A D+ + PTV +V M + +EE FGP+M I+KF T EEVV AN+S YGL A
Sbjct: 374 ---AADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAA 430
Query: 183 VFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
VF+ +A ++ +Q G +N + + QS PFGG K SG GR G GL+A
Sbjct: 431 VFTKDLDKANYLSQALQAGTVWVNCY-DVFGAQS-PFGGYKMSGSGRELGEYGLQA 484
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 17/266 (6%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
A+ L VT+ELGGK IV DD D+ A+ SSGQ C+ R +V + A
Sbjct: 248 AAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKAR 307
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH-- 123
F+ + + +++ G PL +G L EK+ + + +GA ++ G +
Sbjct: 308 FLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNV 367
Query: 124 LSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAV 183
EGA Y PTV +V M + +EE FGP+M ++ F+ ++EV+ AN + +GL V
Sbjct: 368 AGEGA---YVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGV 424
Query: 184 FSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVK 243
F+ RA + ++ G IN + N +PFGG K SGFGR L +K
Sbjct: 425 FTADLARAHRVVDGLEAGTLWINTY--NLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482
Query: 244 SVVEDRWWPYIKTKIPKPIQYPVAEN 269
+V Y+ T + P AEN
Sbjct: 483 TV-------YVST---GKVDAPYAEN 498
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 127/246 (51%), Gaps = 7/246 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
I+ + + ++ +ELGGK IV DD D+ V + ++GQ+C A R Y +
Sbjct: 253 IISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKG 312
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
IY V ++ V ++ +G P ++G L L H E++ V +A G + G
Sbjct: 313 IYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE 372
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 181
G Y+ PT++ ++Q+E FGP++ + F+ +E+VV ANDS+YGL
Sbjct: 373 KRKGNG---YYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLAS 429
Query: 182 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQS-LPFGGVKDSGFGRFAGVEGLRACC 240
+V++ RA ++A++Q G +N +++M S +P GG K SG+G+ + GL
Sbjct: 430 SVWTKDVGRAHRVSARLQYGCTWVN---THFMLVSEMPHGGQKLSGYGKDMSLYGLEDYT 486
Query: 241 LVKSVV 246
+V+ V+
Sbjct: 487 VVRHVM 492
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 117/237 (49%), Gaps = 6/237 (2%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
L VTLELGGK I+ D D+ + + A + + GQ C R +V IY FV +
Sbjct: 261 LKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKR 320
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
+ K G P + G + K+ L+ + +GA++ G G
Sbjct: 321 SVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGK----GLGRK 376
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
+ PTV NV M++ +EE FGP+ I++F T +EV++ AN+S +GL AVF+ +
Sbjct: 377 GFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDIN 436
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 246
+A +++ +Q G IN + N + PFGG K SG GR G GLR VK+V
Sbjct: 437 KALMVSSAMQAGTVWINCY--NALNAQSPFGGFKMSGNGREMGEFGLREYSEVKTVT 491
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 7/247 (2%)
Query: 1 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 59
+I A K+ L V+LELGGK IV D D+ + + A + GQ C A R +V
Sbjct: 253 LIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVE 312
Query: 60 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 119
IY FV + + K G PL G E EK+ +L+ +GA++ G
Sbjct: 313 ESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGG 372
Query: 120 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
G + PTV +V M++ +EE FGP+ IMKF + ++V+K AN++ YGL
Sbjct: 373 G----PWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGL 428
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 239
+F+ +A +++ +Q G +N ++ + PFGG K SG GR G G
Sbjct: 429 SAGIFTNDIDKAITVSSALQSGTVWVNCYS--VVSAQCPFGGFKMSGNGRELGEYGFHEY 486
Query: 240 CLVKSVV 246
VK+V
Sbjct: 487 TEVKTVT 493
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 125/243 (51%), Gaps = 17/243 (6%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
+ P+ LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V +
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
+ + V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 304 IREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK----REG-- 356
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+
Sbjct: 357 -NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSV 245
RA IA Q++ G IN+ + + PF G K SG AG++G++ A VKSV
Sbjct: 416 RAFGIAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSV 470
Query: 246 VED 248
V D
Sbjct: 471 VFD 473
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 125/243 (51%), Gaps = 17/243 (6%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
+ P+ LELGGKD+ IV +D D+ A+ + A SGQ C +R V + V +
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
+ + V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 304 IREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK----REG-- 356
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+
Sbjct: 357 -NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSV 245
RA IA Q++ G IN+ + + PF G K SG AG++G++ A VKSV
Sbjct: 416 RAFGIAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSV 470
Query: 246 VED 248
V D
Sbjct: 471 VFD 473
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Query: 1 MIMRNASKT-LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVH 59
MI A+K+ L VTLELG K+ IV D D+ + A + + GQ+C A + +V
Sbjct: 253 MIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVE 312
Query: 60 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 119
IY FV + + K G PL + G K+ L+ +GA++ G
Sbjct: 313 EAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGG 372
Query: 120 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
G + PTV NV M++ +EE FGP+ IMKF + +EV+K AN++ YGL
Sbjct: 373 G----PWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGL 428
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRAC 239
VF+ +A +++ +Q G +N + + QS P GG K SG GR G G+
Sbjct: 429 VAGVFTKDLDKAVTVSSALQAGTVWVNCYLAA-SAQS-PAGGFKMSGHGREMGEYGIHEY 486
Query: 240 CLVKSVV 246
VK+V
Sbjct: 487 TEVKTVT 493
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 124/243 (51%), Gaps = 17/243 (6%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
+ P+ L LGGKD+ IV +D D+ A+ + A SGQ C +R V + V +
Sbjct: 244 MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
+ + V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 304 IREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK----REG-- 356
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+
Sbjct: 357 -NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSV 245
RA IA Q++ G IN+ + + PF G K SG AG++G++ A VKSV
Sbjct: 416 RAFGIAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSV 470
Query: 246 VED 248
V D
Sbjct: 471 VFD 473
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
A + + LELGG + F V D DV A+ GQ C R VH+D+Y
Sbjct: 243 AGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDE 302
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
FV + VK + G K +G L EK ++ A G E+ G
Sbjct: 303 FVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK----- 357
Query: 126 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 185
V P V V ++ K+ Q E F PI I+K +D+E + +AND+ YGL AVF+
Sbjct: 358 --RVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFT 415
Query: 186 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG---VEGLRACCLV 242
+ + A QI G+ +ND + N ++ FGG K SG GRF VE +
Sbjct: 416 SDLEKGEKFALQIDSGMTHVNDQSVND-SPNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474
Query: 243 KSVVEDRWWPY 253
+ R +P+
Sbjct: 475 SIQKQYRKYPF 485
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 124/243 (51%), Gaps = 17/243 (6%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
+ P+ LELGGKD+ IV +D D+ A+ + A SGQ +R V + V +
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEK 303
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
+ + V +++ G P D+ L + ++ ++ L+NDA DKGA L EG
Sbjct: 304 IREKVLALTIGNP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIK----REG-- 356
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
P + V M+L EE FGP++PI++ + EE ++++N S YGL ++F+
Sbjct: 357 -NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR----ACCLVKSV 245
RA IA Q++ G IN+ + + PF G K SG AG++G++ A VKSV
Sbjct: 416 RAFGIAEQLEVGTVHINN-KTQRGTDNFPFLGAKKSG----AGIQGVKYSIEAMTTVKSV 470
Query: 246 VED 248
V D
Sbjct: 471 VFD 473
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
Query: 13 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 72
+ LELGG + IV D D+ ++ + +GQ C V I F+
Sbjct: 238 IALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVN 297
Query: 73 IVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQY 132
K ++ G PL K D+G L +EH+E ++ +V A+D+G ++L G
Sbjct: 298 KAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK-------AL 350
Query: 133 FPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAR 192
F PT I+ V+ L + E F P++PI++ N +EE++ +AN + YGL A+F+ +++
Sbjct: 351 FYPT-ILEVDRDNILCKTETFAPVIPIIRTN-EEEMIDIANSTEYGLHSAIFTNDINKSL 408
Query: 193 EIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 246
+ A ++ G IND +S + ++PFGGVK SG GR + +K+++
Sbjct: 409 KFAENLEFGGVVIND-SSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 124/231 (53%), Gaps = 9/231 (3%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
+++ +A+ ++ V++ELGG FIV D +V A+ + +++GQ C + +F V R
Sbjct: 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQR 302
Query: 61 DIYALFVSQVAKIVK-SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 119
I+ FV A+ +K ++ G G L + EK++ VNDA+ KGA ++ G
Sbjct: 303 GIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGG 362
Query: 120 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
L + +F PT++ NV M EE FGP+ P++KF+T+EE + +AN + GL
Sbjct: 363 KRHQLGK----NFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGR 229
+S + +A Q++ G+ +N+ S+ C PFGGVK SG GR
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVEC---PFGGVKQSGLGR 466
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 121/231 (52%), Gaps = 12/231 (5%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
++M + T+ ++LELGG FIV DD D+ A+ + +++GQ C A R YV R
Sbjct: 262 LLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQR 321
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
+Y F ++A VK + G +G + + K++ + DA+ KGA+++ G
Sbjct: 322 GVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK 381
Query: 121 -FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
G L +F P ++ V M + +EE FGP+ P+ F+T+EEV+ AND+ +GL
Sbjct: 382 ELGGL-------FFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGL 434
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGR 229
++ + RA ++ ++ G+ N SN + PFGGVK SG GR
Sbjct: 435 AAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVA---PFGGVKQSGLGR 482
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 9/248 (3%)
Query: 2 IMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
IM++ A + V+LELGGK I+ D D+ Q+ + + + G+NC A R +V
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I+ FV +V + V+ + G PL + G H KL + +GA ++ G+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYG 178
+ +F PTV +V M + +EE+FGPIM I +F + V+ AN + +G
Sbjct: 393 --QVPRPGF--FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFG 448
Query: 179 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
L VF+ ++A ++ ++Q G IN + N + PFGG K SGFG+ G L
Sbjct: 449 LASGVFTRDINKALYVSDKLQAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNE 506
Query: 239 CCLVKSVV 246
+K+V
Sbjct: 507 YLRIKTVT 514
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 20/269 (7%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
++M A+K LTPVTLELGGK V D D+ + +SGQ C +
Sbjct: 194 IVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDP 253
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I V ++ K +K G D G + H ++++ L+++ ++ G+
Sbjct: 254 SIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGT 307
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
+ S +Y PT++V+V+ +MQEE FGP+MPI+ + EE ++ N L
Sbjct: 308 WDQSS-----RYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLA 362
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL---- 236
VFS ++ +++ A+ G ND + +LPFGGV +SG G + G +
Sbjct: 363 LYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFS 422
Query: 237 -RACCLVKSVVEDR----WWPYIKTKIPK 260
R CLVKS++ + +P K+P+
Sbjct: 423 HRRSCLVKSLLNEEAHKARYPPSPAKMPR 451
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 9/248 (3%)
Query: 2 IMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
IM++ A + V+L+LGGK I+ D D+ Q+ + + + G+NC A R +V
Sbjct: 273 IMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I+ FV +V + V+ + G PL + G H KL + +GA ++ G+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYG 178
+ +F PTV +V M + +EE+FGPIM I +F + V+ AN + +G
Sbjct: 393 --QVPRPGF--FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFG 448
Query: 179 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
L VF+ ++A ++ ++Q G IN + N + PFGG K SGFG+ G L
Sbjct: 449 LASGVFTRDINKALYVSDKLQAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNE 506
Query: 239 CCLVKSVV 246
+K+V
Sbjct: 507 YLRIKTVT 514
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 123/231 (53%), Gaps = 9/231 (3%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
+++ +A+ ++ V++ELGG FIV D +V A+ + +++GQ + +F V R
Sbjct: 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQR 302
Query: 61 DIYALFVSQVAKIVK-SVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 119
I+ FV A+ +K ++ G G L + EK++ VNDA+ KGA ++ G
Sbjct: 303 GIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGG 362
Query: 120 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGL 179
L + +F PT++ NV M EE FGP+ P++KF+T+EE + +AN + GL
Sbjct: 363 KRHQLGK----NFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGL 418
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAIND-FASNYMCQSLPFGGVKDSGFGR 229
+S + +A Q++ G+ +N+ S+ C PFGGVK SG GR
Sbjct: 419 AGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVEC---PFGGVKQSGLGR 466
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 9/248 (3%)
Query: 2 IMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
IM++ A + V+L LGGK I+ D D+ Q+ + + + G+NC A R +V
Sbjct: 273 IMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEE 332
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I+ FV +V + V+ + G PL + G H KL + +GA ++ G+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYG 178
+ +F PTV +V M + +EE+FGPIM I +F + V+ AN + +G
Sbjct: 393 --QVPRPGF--FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFG 448
Query: 179 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
L VF+ ++A ++ ++Q G IN + N + PFGG K SGFG+ G L
Sbjct: 449 LASGVFTRDINKALYVSDKLQAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNE 506
Query: 239 CCLVKSVV 246
+K+V
Sbjct: 507 YLRIKTVT 514
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 16/253 (6%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
+IM A+K LTPVTLELGGK V + D+ + +SGQ C +
Sbjct: 211 IIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDP 270
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I V ++ K +K G D G + H +++ L+ + +A G
Sbjct: 271 SIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLIE------GQKVAYGG 323
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
G A +Y PT++ +V+ +MQEE FGP++PI+ + EE ++ N L
Sbjct: 324 TGD----AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLA 379
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGL---- 236
+FS + +++ A+ G A ND + SLPFGGV +SG G + G +
Sbjct: 380 LYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFS 439
Query: 237 -RACCLVKSVVED 248
R CLV+ ++ D
Sbjct: 440 HRRSCLVRPLMND 452
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 9/248 (3%)
Query: 2 IMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
IM++ A + V+LELGGK I+ D D+ Q+ + + + G+N A R +V
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEE 332
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I+ FV +V + V+ + G PL + G H KL + +GA ++ G+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYG 178
+ +F PTV +V M + +EE+FGPIM I +F + V+ AN + +G
Sbjct: 393 --QVPRPGF--FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFG 448
Query: 179 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
L VF+ ++A ++ ++Q G IN + N + PFGG K SGFG+ G L
Sbjct: 449 LASGVFTRDINKALYVSDKLQAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNE 506
Query: 239 CCLVKSVV 246
+K+V
Sbjct: 507 YLRIKTVT 514
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 9/248 (3%)
Query: 2 IMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
IM++ A + V+LELGGK I+ D D+ Q+ + + + G+N A R +V
Sbjct: 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEE 332
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I+ FV +V + V+ + G PL + G H KL + +GA ++ G+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYG 178
+ +F PTV +V M + +EE+FGPIM I +F + V+ AN + +G
Sbjct: 393 --QVPRPGF--FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFG 448
Query: 179 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
L VF+ ++A ++ ++Q G IN + N + PFGG K SGFG+ G L
Sbjct: 449 LASGVFTRDINKALYVSDKLQAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNE 506
Query: 239 CCLVKSVV 246
+K+V
Sbjct: 507 YLRIKTVT 514
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 9/248 (3%)
Query: 2 IMRN-ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
IM++ A + V+L LGGK I+ D D+ Q+ + + + G+N A R +V
Sbjct: 273 IMKSCALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEE 332
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
I+ FV +V + V+ + G PL + G H KL + +GA ++ G+
Sbjct: 333 SIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGN 392
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYG 178
+ +F PTV +V M + +EE+FGPIM I +F + V+ AN + +G
Sbjct: 393 --QVPRPGF--FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFG 448
Query: 179 LGCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRA 238
L VF+ ++A ++ ++Q G IN + N + PFGG K SGFG+ G L
Sbjct: 449 LASGVFTRDINKALYVSDKLQAGTVFINTY--NKTDVAAPFGGFKQSGFGKDLGEAALNE 506
Query: 239 CCLVKSVV 246
+K+V
Sbjct: 507 YLRIKTVT 514
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 7/245 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
++ A+KT+ LELGGK IV D D+ V ++GQ+C A R Y
Sbjct: 255 VLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAG 314
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALD-KGAEILARGS 120
IY V+ + V ++ + ++G L +++ + V A D K EI G
Sbjct: 315 IYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGR 374
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
G EG +F PTV+ ++++ E FGP++ + +F ++ V ANDS YGL
Sbjct: 375 TGS-DEGF---FFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLA 430
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACC 240
+V++ +A A+++Q G IN + P GG+K SG+G+ V L
Sbjct: 431 SSVWTKDISKAXRAASRLQYGCTWINTHFX--LTNEXPHGGIKQSGYGKDXSVYALEDYT 488
Query: 241 LVKSV 245
V+ +
Sbjct: 489 AVRHI 493
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 115/264 (43%), Gaps = 14/264 (5%)
Query: 6 ASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYAL 65
A++T+ V LELGGK IV D D+ A ++GQ C R V I
Sbjct: 260 AARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDA 319
Query: 66 FVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLS 125
++ I + V+ G PL + +GA H+EK+ + V + GAE+L G
Sbjct: 320 LXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGRE 379
Query: 126 EGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFS 185
G Y+ PTV V + +EE FGP++ + F T +E V LAN + +GL +V+S
Sbjct: 380 AGL---YYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWS 436
Query: 186 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSV 245
+ A + +I+ G IN LP GG K SG GR G G K V
Sbjct: 437 TNLETALQTIRRIRAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYSQFKGV 494
Query: 246 VEDRWWPYIKTKIPKPIQYPVAEN 269
+ +P + AEN
Sbjct: 495 ---------HVTLGRPAPWFTAEN 509
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
L V E+GGKD +V +D D+ AQ +A +GQ C+ R VH +Y + +
Sbjct: 281 LKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKR 340
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
V +I +S G P + MG + K+ + + ++G L G G S+G
Sbjct: 341 VIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEGR--LVSGGKGDDSKG-- 396
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
+ PT+ +++ +LMQEE FGP++ K ++ +E +++AN++ YGL AV + ++
Sbjct: 397 -YFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRD 455
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 232
+ G N + + PFGG K SG AG
Sbjct: 456 HINRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 5/231 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
++R L V +E+GGKD +V D D+ A+ + +A SGQ C+ R +H+D
Sbjct: 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKD 332
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
+Y + + + K+++ G P MG + + EK+ + + +G L G
Sbjct: 333 VYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGR--LMTGGE 390
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGC 181
G S G + PT+I +++ +MQEE FGP++ K N + +++AN++ YGL
Sbjct: 391 GDSSTGF---FIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTG 447
Query: 182 AVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 232
AV + ++ + + G N + + PFGG K SG AG
Sbjct: 448 AVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 14/241 (5%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQ 69
+ V LELGG F+V D D+ AQ A A GQ C R V ++ F+ +
Sbjct: 254 MKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEK 313
Query: 70 VAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAV 129
+ VK++ G P A +G + L+ + A +GA + G EG
Sbjct: 314 FVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI----EG-- 367
Query: 130 DQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQH 189
+ P V +V M++ +EE FGP++ ++K + + +LAN S +GL AV+S
Sbjct: 368 -RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDID 426
Query: 190 RAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVVEDR 249
RA + A QI G+ IND N + FGG K+SG GRF G ++ DR
Sbjct: 427 RAAQFALQIDSGMVHINDLTVNDEPHVM-FGGSKNSGLGRFNG------DWAIEEFTTDR 479
Query: 250 W 250
W
Sbjct: 480 W 480
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
++M+ A+K LTPV LELGGK IV D D+ + +SGQ C + YVH
Sbjct: 221 VVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVH- 279
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
Y++ + + ++V+ V P ++ + L ++Q LV+ ++L GS
Sbjct: 280 --YSVKDALLERLVERVKTELP-----EINSTGKLVTERQVQRLVSLLEATQGQVLV-GS 331
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR-YGL 179
+S+ A+ TV+ V LM EE FGPI+P+++F++ + N L
Sbjct: 332 QADVSKRALSA----TVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPL 387
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 232
VF A+ I QIQ G A +N + LPFGG+ SG G + G
Sbjct: 388 AVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHG 440
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 15 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 74
LELGG +A IV +D D+ V AV A++ ++GQ C R +H ++ V ++AK
Sbjct: 266 LELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAY 325
Query: 75 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 134
K V G P G L + ++ + A +G ++ G Y
Sbjct: 326 KQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRP----GNYVE 381
Query: 135 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA-RE 193
PT+I + H ++ E F PI+ ++KF T+EE N+ + GL ++F+ R R
Sbjct: 382 PTIITGLAHDAPIVHTETFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGRVFRW 441
Query: 194 IAAQ-IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 237
+ + CG+ +N S FGG K +G GR +G + +
Sbjct: 442 LGPKGSDCGIVNVNIPTSGAEIGG-AFGGEKHTGGGRESGSDSWK 485
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 14 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 73
+ELGG D IV +D D+ A R +GQ C + R +Y V +VAK
Sbjct: 261 VMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 74 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 133
+ S+ G P D+G L +++ + DA++KG +LA G L Y
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYV 374
Query: 134 PPTVI---VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 190
PT++ + M L + E F P+ ++ ++ ++LAN YGL AVF +
Sbjct: 375 QPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 434
Query: 191 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 246
R ++ G IND + PFGG K SG R + A K++V
Sbjct: 435 IRRAVRLLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 15 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 74
LELGG +A I +D D+ V A+ AA+ ++GQ C A R ++H I+ V+++ K
Sbjct: 268 LELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAY 327
Query: 75 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFP 134
+ G P G L + V +A +G ++ +G Y
Sbjct: 328 AQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV----YGGKVMDRPGNYVE 383
Query: 135 PTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRA-RE 193
PT++ + H + E F PI+ + KF +EEV N+ + GL ++F+ R R
Sbjct: 384 PTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRW 443
Query: 194 IAAQ-IQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLR 237
+ + CG+ +N S FGG K +G GR +G + +
Sbjct: 444 LGPKGSDCGIVNVNIPTSGAEIGG-AFGGEKHTGGGRESGSDAWK 487
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 14 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 73
+ELGG D IV +D D+ A R +GQ C + R +Y V +VAK
Sbjct: 261 VMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 74 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 133
+ S+ G P D+G L +++ + DA++KG +LA G L Y
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYV 374
Query: 134 PPTVI---VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 190
PT++ + M L + E F P+ ++ ++ ++LAN YGL AVF +
Sbjct: 375 QPTLVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 434
Query: 191 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 246
R ++ G IND + PFGG K SG R + A K++V
Sbjct: 435 IRRAVRLLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 1 MIMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHR 60
++M+ A+K LTPV LELGGK IV D D+ + +SGQ + YVH
Sbjct: 221 VVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVH- 279
Query: 61 DIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGS 120
Y++ + + ++V+ V P ++ + L ++Q LV+ ++L GS
Sbjct: 280 --YSVKDALLERLVERVKTELP-----EINSTGKLVTERQVQRLVSLLEATQGQVLV-GS 331
Query: 121 FGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSR-YGL 179
+S+ A+ TV+ V LM EE FGPI+P+++F++ + N L
Sbjct: 332 QADVSKRALSA----TVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPL 387
Query: 180 GCAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 232
VF A+ I QIQ G A +N + LPFGG+ SG G + G
Sbjct: 388 AVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHG 440
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 9/235 (3%)
Query: 15 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 74
+E GGKDA IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 287 VETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRA 346
Query: 75 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF- 133
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 347 ERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYFI 399
Query: 134 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 193
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 400 APTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEW 459
Query: 194 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 247
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 460 ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 101/236 (42%), Gaps = 10/236 (4%)
Query: 14 TLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKI 73
+ELGG D IV +D D+ A R +GQ C + R +Y V +VAK
Sbjct: 261 VMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320
Query: 74 VKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF 133
+ S+ G P D+G L +++ + DA++KG +LA G L Y
Sbjct: 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR--RLGP----TYV 374
Query: 134 PPTVI---VNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHR 190
PT + + M L + E F P+ ++ ++ ++LAN YGL AVF +
Sbjct: 375 QPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVK 434
Query: 191 AREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGVEGLRACCLVKSVV 246
R ++ G IND + PFGG K SG R + A K++V
Sbjct: 435 IRRAVRLLEVGAIYINDM-PRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 9/235 (3%)
Query: 15 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 74
+E GGK+A IV + D A+ V +A GQ C+ A R + + Y + +V K
Sbjct: 287 VETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRA 346
Query: 75 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF- 133
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 347 ERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYFI 399
Query: 134 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 193
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 400 APTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEW 459
Query: 194 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 247
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 460 ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 15 LELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIV 74
+E GGKDA IV + D A+ V +A GQ + A R + + Y + +V K
Sbjct: 287 VETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRA 346
Query: 75 KSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYF- 133
+ +S GP D+G + E K+ + + ++G +L G EG + YF
Sbjct: 347 ERLSVGPAEENP-DLGPVVSAEQERKVLSYIEIGKNEGQLVLG----GKRLEG--EGYFI 399
Query: 134 PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRARE 193
PTV V ++ QEE FGP++ +++ E +++AND+ YGL V+S +
Sbjct: 400 APTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEW 459
Query: 194 IAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG-VEGLRACCLVKSVVE 247
+ G N + + PFGG K SG G ++ LR +K+V E
Sbjct: 460 ARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 6/228 (2%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRD 61
+ + S+ L V G K+ IV +D ++ V AA S+G+ C V
Sbjct: 235 VYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEG 294
Query: 62 IYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF 121
I F++++ + V + G L +G + ++ ++ + + L++GA ++ G
Sbjct: 295 IADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR- 353
Query: 122 GHLSEGAVDQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLG 180
++S+ D YF PT+ NV M + ++E F P++ +++ +E +++AN S + G
Sbjct: 354 ENVSD---DGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANG 410
Query: 181 CAVFSGSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFG 228
+F+ + + R I G+ IN M PF G K S FG
Sbjct: 411 ACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMA-FFPFSGWKSSFFG 457
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 16 ELGGKDAFIVCDDVD----VPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVA 71
E+GGK+A I+ DD D VPHV + +A GQ C+ R V +Y F+ ++
Sbjct: 781 EMGGKNAIIIDDDADLDEAVPHV----LYSAFGFQGQKCSACSRVIVLDAVYDKFIERLV 836
Query: 72 KIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGH-LSEGAV- 129
+ K+ GP MGA+ + ++ + AEI R GH L E V
Sbjct: 837 SMAKATKVGPSEDPANYMGAVA--------DDKAMKSIKEYAEIGKRE--GHVLYESPVP 886
Query: 130 --DQYF-PPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 186
+ YF P T+I + ++ QEE FGP++ +M+ ++ ++ AN +++ L +FS
Sbjct: 887 AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSR 946
Query: 187 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 232
S + + + G IN + + + PFGG + SG G AG
Sbjct: 947 SPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG 992
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 5/241 (2%)
Query: 18 GGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNC-AGAERFYVHRDIYALFVSQVAKIVKS 76
G K+ I+ D D+ A + A S+G+ C A + V + + ++ V+S
Sbjct: 272 GAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVES 331
Query: 77 VSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSEGAVDQYFPPT 136
+ GP K D G + E +++++L++ +++GA+++ G L +
Sbjct: 332 LRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGC 391
Query: 137 VIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSGSQHRAREIAA 196
+ +V + + E FGP++ +++ EE + L YG G A+++ AR+ A+
Sbjct: 392 LFDDVTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGDAARDFAS 451
Query: 197 QIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRF--AGVEGLRACCLVKSVVEDRWWPYI 254
+I G +N + FGG K S FG G + ++ K++ RW I
Sbjct: 452 RINIGXVGVNVPIPVPLAYH-SFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS-RWPSGI 509
Query: 255 K 255
K
Sbjct: 510 K 510
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 29/235 (12%)
Query: 8 KTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFV 67
+T + E GGK+ V DV V +R+A + GQ C+ R YV + ++
Sbjct: 306 RTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIK 365
Query: 68 SQVAKIVKSVSAGPP-------LAGKYDMGALC----LLEHSEKLQNLVNDALDKGAEIL 116
++ + + G P + D A LEH+ +L IL
Sbjct: 366 GRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL---------SIL 416
Query: 117 ARGSFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDE--EVVKLAND 174
A G +V Y P +I + + +M+EE FGP++ + + D+ E +KL +
Sbjct: 417 AGGQCNE----SVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDS 472
Query: 175 -SRYGLGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 226
+ YGL AVF+ + +E ++ G IND ++ + PFGG + SG
Sbjct: 473 TTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASG 527
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 16 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 75
E GGK+ V DV V +R+A + GQ C+ R YV ++ ++ +
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHS 376
Query: 76 SVSAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSF 121
+ G P D G LEH+ +L ILA G
Sbjct: 377 RIKVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK- 423
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYG 178
+ +V + P ++ + + +M+EE FGP++ + + D +E ++L + + YG
Sbjct: 424 ---CDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYG 480
Query: 179 LGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 226
L AVFS + +E ++ G IND ++ + PFGG + SG
Sbjct: 481 LTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 16 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 75
E GGK+ V DV V +R+A + GQ C+ R YV ++ ++ +
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHS 376
Query: 76 SVSAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSF 121
+ G P D G LEH+ +L ILA G
Sbjct: 377 RIKVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK- 423
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYG 178
+ +V + P ++ + + +M+EE FGP++ + + D +E ++L + + YG
Sbjct: 424 ---CDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYG 480
Query: 179 LGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 226
L AVFS + +E ++ G IND ++ + PFGG + SG
Sbjct: 481 LTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
Query: 16 ELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVK 75
E GGK+ V DV V +R+A + GQ C+ R YV ++ ++ +
Sbjct: 317 ECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHS 376
Query: 76 SVSAGPPLAGKYDMGALC--------------LLEHSEKLQNLVNDALDKGAEILARGSF 121
+ G P D G LEH+ +L ILA G
Sbjct: 377 RIKVGDPAE---DFGTFFSAVIDAKSFARIKKWLEHARSSPSLT---------ILAGGK- 423
Query: 122 GHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLAND-SRYG 178
+ +V + P ++ + + +M+EE FGP++ + + D +E ++L + + YG
Sbjct: 424 ---CDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTTSYG 480
Query: 179 LGCAVFSGSQHRAREIAAQIQ--CGVAAINDFASNYMCQSLPFGGVKDSG 226
L AVFS + +E ++ G IND ++ + PFGG + SG
Sbjct: 481 LTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASG 530
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 13 VTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAK 72
+ LE GG + +V + D+ +++A S+GQ C A R V + + + +A+
Sbjct: 245 LALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDAL--LAR 302
Query: 73 IVKSVSAGPPLAGKYD------MGALCLLEHSEKLQNLVNDALDKGAEILARGSFGHLSE 126
+V +VSA + G++D GA+ L +E L + KGA+ L + +
Sbjct: 303 LV-AVSATLRV-GRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXT--QPID 358
Query: 127 GAVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTDEEVVKLANDSRYGLGCAVFSG 186
GA P I++V+ + EE FGP++ +++++ ++ AN ++YGL + S
Sbjct: 359 GAA--LLTPG-ILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSD 415
Query: 187 SQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGR 229
S+ R + + + G+ N + S PFGG+ SG R
Sbjct: 416 SRERFEQFLVESRAGIVNWNKQLTG-AASSAPFGGIGASGNHR 457
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 15/227 (6%)
Query: 10 LTPVTLELGGKDAFIVCDDVDVP-HVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVS 68
+ P+ E GG +A I D +P VA V +A +S+GQ C+ +V D+ +
Sbjct: 754 IVPLIAETGGINAMI-ADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIE 812
Query: 69 QVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARGSF-GHLSEG 127
VA + + G P +G + +E ++L DA + AR F G EG
Sbjct: 813 MVAGAARELKIGDPSDVATHVGPVIDVEAKQRL-----DAHIARMKTEARLHFAGPAPEG 867
Query: 128 AVDQYFPPTVIVNVNHTMKLMQEEAFGPIMPIMKFNTD--EEVVKLANDSRYGLGCAVFS 185
F I + +L EE FGPI+ ++++ + E V++ + YGL V S
Sbjct: 868 C----FVAPHIFELTEAGQLT-EEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHS 922
Query: 186 GSQHRAREIAAQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAG 232
I ++Q G +N + PFGG SG G AG
Sbjct: 923 RIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAG 969
>pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa
pdb|3ZTT|A Chain A, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|B Chain B, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|C Chain C, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
pdb|3ZTT|D Chain D, Crystal Structure Of Pneumococcal Surface Antigen Psaa
With Manganese
Length = 303
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 27/156 (17%)
Query: 2 IMRNASKTLTPVTLELGGKDAFIVCDDVDVPHVAQIAVRAALQSSGQNCAGAE--RFYVH 59
++ NA KT KD F V D VDV ++ GQN G E +++
Sbjct: 97 LVENAKKT--------ENKDYFAVSDGVDVIYL-----------EGQNEKGKEDPHAWLN 137
Query: 60 RDIYALFVSQVAKIVKSVSAGPPLAGKYDMGALCLLEHSEKLQNLVNDALDKGAEILARG 119
+ +F +AK +SA P + L E+++KL L ++ DK +I A
Sbjct: 138 LENGIIFAKNIAK---QLSAKDP--NNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEK 192
Query: 120 SFGHLSEGAVDQYFPPTVIVNVNHTMKLMQEEAFGP 155
SEGA +YF V + ++ EE P
Sbjct: 193 KLIVTSEGAF-KYFSKAYGVPSAYIWEINTEEEGTP 227
>pdb|3A8I|E Chain E, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8I|F Chain F, Crystal Structure Of Et-Ehred-5-Ch3-Thf Complex
pdb|3A8J|E Chain E, Crystal Structure Of Et-Ehred Complex
pdb|3A8J|F Chain F, Crystal Structure Of Et-Ehred Complex
pdb|3A8K|E Chain E, Crystal Structure Of Etd97n-Ehred Complex
pdb|3A8K|F Chain F, Crystal Structure Of Etd97n-Ehred Complex
pdb|3AB9|A Chain A, Crystal Structure Of Lipoylated E. Coli H-Protein
(Reduced Form)
Length = 129
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 29 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 83
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 43 VDLPEVG------ATVSAGDDCAVAESVXAASDIYAPVSGEIVAVNDALSDSPEL 91
>pdb|3A7A|B Chain B, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7A|D Chain D, Crystal Structure Of E. Coli Lipoate-protein Ligase A In
Complex With Octyl-amp And Apoh-protein
pdb|3A7L|A Chain A, Crystal Structure Of E. Coli Apoh-Protein
Length = 128
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 29 VDVPHVAQIAVRAALQSSGQNCAGAERFYVHRDIYALFVSQVAKIVKSVSAGPPL 83
VD+P V A S+G +CA AE DIYA ++ + ++S P L
Sbjct: 42 VDLPEVG------ATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPEL 90
>pdb|3TTS|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTS|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus
pdb|3TTY|A Chain A, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|B Chain B, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|C Chain C, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|D Chain D, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|E Chain E, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
pdb|3TTY|F Chain F, Crystal Structure Of Beta-Galactosidase From Bacillus
Circulans Sp. Alkalophilus In Complex With Galactose
Length = 675
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 83 LAGKYDMGALCLLEHSEKLQNLVNDALD--KGAEILARGSFGH 123
L G Y G LC + H+E + L D KG +L R FG+
Sbjct: 537 LRGSYSCGILCDVIHAETAEVLAEYGADYYKGTPVLTRNKFGN 579
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,920,672
Number of Sequences: 62578
Number of extensions: 358209
Number of successful extensions: 1016
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 767
Number of HSP's gapped (non-prelim): 91
length of query: 313
length of database: 14,973,337
effective HSP length: 99
effective length of query: 214
effective length of database: 8,778,115
effective search space: 1878516610
effective search space used: 1878516610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)